Query 017916
Match_columns 364
No_of_seqs 131 out of 1519
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 04:32:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017916.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017916hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024 Sorbitol dehydrogenase 100.0 1.4E-60 3.1E-65 409.4 32.6 346 15-363 2-351 (354)
2 COG1064 AdhP Zn-dependent alco 100.0 5.5E-60 1.2E-64 418.9 33.3 330 16-364 2-337 (339)
3 PRK09880 L-idonate 5-dehydroge 100.0 1.6E-52 3.5E-57 387.5 38.0 337 16-364 3-343 (343)
4 KOG0023 Alcohol dehydrogenase, 100.0 2.9E-51 6.3E-56 351.1 31.5 338 12-364 4-354 (360)
5 cd08239 THR_DH_like L-threonin 100.0 2.9E-50 6.4E-55 372.2 38.3 336 18-364 1-339 (339)
6 COG1062 AdhC Zn-dependent alco 100.0 4.5E-50 9.7E-55 347.8 30.6 334 18-363 3-365 (366)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 4.7E-49 1E-53 368.1 37.6 334 18-362 1-371 (371)
8 PLN02740 Alcohol dehydrogenase 100.0 5.4E-49 1.2E-53 368.7 37.6 347 10-364 3-381 (381)
9 PLN02827 Alcohol dehydrogenase 100.0 8.7E-49 1.9E-53 366.3 38.0 344 9-364 4-376 (378)
10 COG0604 Qor NADPH:quinone redu 100.0 7.3E-49 1.6E-53 356.7 34.6 310 18-364 1-326 (326)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 8E-48 1.7E-52 358.2 37.0 336 17-363 1-357 (358)
12 PLN02702 L-idonate 5-dehydroge 100.0 3.3E-47 7.1E-52 355.1 40.9 363 1-363 1-363 (364)
13 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.3E-47 5E-52 356.0 38.4 337 18-364 2-368 (368)
14 PRK10309 galactitol-1-phosphat 100.0 3.1E-47 6.7E-52 353.1 38.7 335 18-364 1-346 (347)
15 COG1063 Tdh Threonine dehydrog 100.0 2.4E-47 5.2E-52 351.3 36.0 337 18-364 1-350 (350)
16 cd08301 alcohol_DH_plants Plan 100.0 6E-47 1.3E-51 353.9 38.1 338 17-363 2-369 (369)
17 TIGR02819 fdhA_non_GSH formald 100.0 2.8E-47 6.1E-52 356.7 35.7 336 18-364 3-390 (393)
18 PLN02586 probable cinnamyl alc 100.0 5.8E-47 1.2E-51 352.0 36.7 337 9-364 5-353 (360)
19 cd08300 alcohol_DH_class_III c 100.0 1.2E-46 2.6E-51 351.4 38.2 337 17-363 2-368 (368)
20 cd08233 butanediol_DH_like (2R 100.0 3.2E-46 6.9E-51 346.9 38.5 340 18-363 1-351 (351)
21 TIGR03201 dearomat_had 6-hydro 100.0 5.5E-46 1.2E-50 344.7 36.3 332 23-364 4-349 (349)
22 cd08277 liver_alcohol_DH_like 100.0 9.7E-46 2.1E-50 345.0 37.9 335 18-363 3-365 (365)
23 cd08230 glucose_DH Glucose deh 100.0 4.9E-46 1.1E-50 345.9 35.6 331 18-364 1-355 (355)
24 PLN02178 cinnamyl-alcohol dehy 100.0 6.8E-46 1.5E-50 345.8 36.1 322 25-364 15-348 (375)
25 KOG0022 Alcohol dehydrogenase, 100.0 3.1E-46 6.7E-51 318.6 30.3 341 14-363 4-374 (375)
26 KOG1197 Predicted quinone oxid 100.0 1.1E-46 2.3E-51 311.9 25.8 305 18-363 9-329 (336)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.3E-45 5.1E-50 337.2 35.0 312 27-362 13-328 (329)
28 cd08237 ribitol-5-phosphate_DH 100.0 3.1E-45 6.7E-50 338.2 30.7 324 18-364 3-339 (341)
29 PLN02514 cinnamyl-alcohol dehy 100.0 6.8E-44 1.5E-48 331.3 36.4 329 18-364 10-350 (357)
30 PRK10083 putative oxidoreducta 100.0 1.5E-43 3.2E-48 327.6 37.7 335 18-364 1-337 (339)
31 cd08231 MDR_TM0436_like Hypoth 100.0 2.7E-43 5.8E-48 328.5 38.7 338 19-364 2-361 (361)
32 TIGR01202 bchC 2-desacetyl-2-h 100.0 6.5E-44 1.4E-48 324.8 32.5 305 18-363 2-308 (308)
33 cd05285 sorbitol_DH Sorbitol d 100.0 2E-42 4.4E-47 320.4 37.4 338 20-363 1-342 (343)
34 cd08285 NADP_ADH NADP(H)-depen 100.0 2.3E-42 4.9E-47 321.0 37.5 338 18-364 1-351 (351)
35 cd08256 Zn_ADH2 Alcohol dehydr 100.0 5.3E-42 1.2E-46 318.4 38.6 339 18-362 1-350 (350)
36 cd08238 sorbose_phosphate_red 100.0 2.6E-42 5.7E-47 326.2 37.0 330 17-364 2-368 (410)
37 cd08296 CAD_like Cinnamyl alco 100.0 1.1E-41 2.4E-46 314.1 37.5 329 18-363 1-333 (333)
38 cd05284 arabinose_DH_like D-ar 100.0 1.6E-41 3.4E-46 314.1 36.9 334 18-364 1-340 (340)
39 cd08283 FDH_like_1 Glutathione 100.0 2.3E-41 5E-46 317.6 37.8 339 18-364 1-386 (386)
40 cd08299 alcohol_DH_class_I_II_ 100.0 3.1E-41 6.7E-46 315.2 38.1 338 17-364 7-373 (373)
41 cd08232 idonate-5-DH L-idonate 100.0 3.4E-41 7.3E-46 311.8 36.6 334 22-364 2-339 (339)
42 PRK05396 tdh L-threonine 3-deh 100.0 8.6E-41 1.9E-45 309.3 37.0 337 18-364 1-340 (341)
43 cd05278 FDH_like Formaldehyde 100.0 1.1E-40 2.4E-45 309.3 36.5 338 18-364 1-347 (347)
44 cd08286 FDH_like_ADH2 formalde 100.0 1.9E-40 4.1E-45 307.5 37.9 338 18-364 1-345 (345)
45 cd05279 Zn_ADH1 Liver alcohol 100.0 1.4E-40 3E-45 310.3 36.9 334 19-363 2-365 (365)
46 cd08246 crotonyl_coA_red croto 100.0 1.3E-40 2.8E-45 313.7 36.4 342 14-363 9-392 (393)
47 cd08284 FDH_like_2 Glutathione 100.0 2.1E-40 4.6E-45 307.1 36.7 334 18-363 1-343 (344)
48 KOG0025 Zn2+-binding dehydroge 100.0 2.6E-41 5.7E-46 284.9 27.3 316 10-363 12-351 (354)
49 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.8E-40 8.3E-45 305.0 37.4 329 18-363 1-341 (341)
50 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.8E-40 8.3E-45 309.3 37.5 330 27-362 37-383 (384)
51 cd08235 iditol_2_DH_like L-idi 100.0 6.7E-40 1.5E-44 303.6 38.2 335 18-363 1-343 (343)
52 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1E-39 2.2E-44 301.7 38.9 335 18-364 1-337 (337)
53 cd08242 MDR_like Medium chain 100.0 5E-40 1.1E-44 301.4 36.5 318 18-363 1-318 (319)
54 cd08278 benzyl_alcohol_DH Benz 100.0 5.4E-40 1.2E-44 306.3 37.1 333 17-363 2-365 (365)
55 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.2E-40 1.1E-44 305.1 36.9 337 18-364 1-350 (350)
56 cd08279 Zn_ADH_class_III Class 100.0 6E-40 1.3E-44 306.0 36.8 334 18-361 1-362 (363)
57 cd08234 threonine_DH_like L-th 100.0 2.9E-39 6.4E-44 298.2 37.3 331 18-362 1-333 (334)
58 cd08287 FDH_like_ADH3 formalde 100.0 2.5E-39 5.5E-44 300.0 36.8 334 18-363 1-344 (345)
59 cd08236 sugar_DH NAD(P)-depend 100.0 3E-39 6.5E-44 299.2 36.9 333 18-362 1-343 (343)
60 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3.1E-39 6.8E-44 301.6 37.0 336 18-363 1-367 (367)
61 cd08260 Zn_ADH6 Alcohol dehydr 100.0 4.7E-39 1E-43 298.2 37.5 335 18-363 1-344 (345)
62 cd08291 ETR_like_1 2-enoyl thi 100.0 9.8E-40 2.1E-44 300.1 32.2 305 18-363 1-324 (324)
63 TIGR01751 crot-CoA-red crotony 100.0 2.5E-39 5.4E-44 305.2 35.7 343 14-364 4-387 (398)
64 cd05281 TDH Threonine dehydrog 100.0 5.8E-39 1.3E-43 297.0 37.0 337 18-364 1-341 (341)
65 cd05283 CAD1 Cinnamyl alcohol 100.0 4E-39 8.7E-44 297.5 35.1 320 26-363 9-337 (337)
66 TIGR00692 tdh L-threonine 3-de 100.0 5.3E-39 1.1E-43 297.2 35.9 329 27-364 9-340 (340)
67 cd08297 CAD3 Cinnamyl alcohol 100.0 1.3E-38 2.9E-43 294.7 37.8 334 18-364 1-341 (341)
68 PLN03154 putative allyl alcoho 100.0 4.1E-39 8.9E-44 298.0 34.2 295 26-364 24-345 (348)
69 cd08282 PFDH_like Pseudomonas 100.0 1.3E-38 2.9E-43 298.0 37.1 334 18-364 1-375 (375)
70 PRK13771 putative alcohol dehy 100.0 6.4E-39 1.4E-43 296.0 34.1 327 18-364 1-333 (334)
71 PRK09422 ethanol-active dehydr 100.0 1.5E-38 3.3E-43 294.0 36.4 331 18-364 1-336 (338)
72 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.3E-38 9.2E-43 290.8 36.9 333 18-364 1-338 (338)
73 cd08295 double_bond_reductase_ 100.0 1.9E-38 4E-43 293.2 33.9 296 26-364 18-338 (338)
74 cd08259 Zn_ADH5 Alcohol dehydr 100.0 9.4E-38 2E-42 287.8 36.6 327 18-363 1-332 (332)
75 TIGR02825 B4_12hDH leukotriene 100.0 2.3E-38 4.9E-43 291.1 31.3 289 25-363 15-325 (325)
76 cd08293 PTGR2 Prostaglandin re 100.0 2.6E-38 5.6E-43 293.2 31.8 299 26-364 20-345 (345)
77 TIGR03366 HpnZ_proposed putati 100.0 8.1E-39 1.8E-43 287.6 25.3 260 76-343 1-279 (280)
78 cd08292 ETR_like_2 2-enoyl thi 100.0 1.9E-37 4.2E-42 284.8 33.5 306 18-363 1-324 (324)
79 cd08298 CAD2 Cinnamyl alcohol 100.0 6.3E-37 1.4E-41 282.1 35.6 320 18-362 1-329 (329)
80 cd08294 leukotriene_B4_DH_like 100.0 2.3E-37 4.9E-42 285.0 32.5 287 27-364 19-329 (329)
81 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.3E-36 2.8E-41 281.0 36.6 334 18-364 1-342 (342)
82 cd08274 MDR9 Medium chain dehy 100.0 2E-36 4.4E-41 281.0 34.4 325 18-364 1-350 (350)
83 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.3E-36 4.9E-41 277.9 34.0 319 18-361 1-325 (325)
84 cd08245 CAD Cinnamyl alcohol d 100.0 9.8E-36 2.1E-40 274.2 35.2 325 19-362 1-330 (330)
85 COG2130 Putative NADP-dependen 100.0 4.3E-36 9.4E-41 256.0 27.8 294 25-364 23-338 (340)
86 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.2E-35 2.5E-40 270.6 32.6 297 19-325 2-306 (306)
87 cd08244 MDR_enoyl_red Possible 100.0 3.2E-35 7E-40 270.0 35.2 311 18-364 1-324 (324)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 8.3E-36 1.8E-40 275.4 31.4 299 25-363 13-334 (336)
89 cd08269 Zn_ADH9 Alcohol dehydr 100.0 5.1E-35 1.1E-39 267.3 34.7 300 25-362 3-311 (312)
90 cd08290 ETR 2-enoyl thioester 100.0 8.8E-35 1.9E-39 269.1 32.3 311 18-364 1-341 (341)
91 PTZ00354 alcohol dehydrogenase 100.0 2.8E-34 6.1E-39 264.8 34.8 309 17-364 1-328 (334)
92 cd08270 MDR4 Medium chain dehy 100.0 2.2E-34 4.8E-39 262.2 32.9 292 19-364 2-305 (305)
93 KOG1198 Zinc-binding oxidoredu 100.0 2.7E-35 5.8E-40 267.8 25.7 299 27-364 18-345 (347)
94 cd08276 MDR7 Medium chain dehy 100.0 9.6E-34 2.1E-38 261.4 36.4 329 18-364 1-336 (336)
95 PRK10754 quinone oxidoreductas 100.0 2.9E-34 6.3E-39 264.1 32.5 308 18-363 2-326 (327)
96 cd08249 enoyl_reductase_like e 100.0 3.3E-34 7.1E-39 264.9 30.0 313 18-364 1-339 (339)
97 cd08250 Mgc45594_like Mgc45594 100.0 2.1E-33 4.5E-38 258.6 33.4 305 18-363 2-329 (329)
98 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.2E-33 4.7E-38 258.0 33.4 308 18-364 1-325 (325)
99 cd05282 ETR_like 2-enoyl thioe 100.0 1.3E-33 2.8E-38 259.3 31.6 296 28-363 13-323 (323)
100 TIGR02823 oxido_YhdH putative 100.0 4.4E-33 9.6E-38 255.8 33.2 305 20-364 2-323 (323)
101 cd08243 quinone_oxidoreductase 100.0 6.5E-33 1.4E-37 254.0 33.1 305 18-362 1-319 (320)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 7.7E-33 1.7E-37 254.5 32.2 310 18-364 1-326 (326)
103 cd08252 AL_MDR Arginate lyase 100.0 2.4E-32 5.2E-37 252.3 33.2 307 18-363 1-336 (336)
104 cd08253 zeta_crystallin Zeta-c 100.0 9.3E-32 2E-36 246.6 33.6 311 19-364 2-325 (325)
105 cd05276 p53_inducible_oxidored 100.0 1.2E-31 2.6E-36 245.5 33.7 305 18-362 1-323 (323)
106 cd08288 MDR_yhdh Yhdh putative 100.0 1.3E-31 2.8E-36 246.1 33.5 307 18-364 1-324 (324)
107 cd08248 RTN4I1 Human Reticulon 100.0 7.3E-32 1.6E-36 250.5 31.7 307 18-363 1-350 (350)
108 cd05288 PGDH Prostaglandin deh 100.0 6E-32 1.3E-36 248.9 30.8 293 26-362 17-329 (329)
109 cd08272 MDR6 Medium chain dehy 100.0 1.9E-31 4.1E-36 244.8 33.5 307 18-364 1-326 (326)
110 cd08247 AST1_like AST1 is a cy 100.0 2.1E-31 4.5E-36 247.6 33.2 315 19-364 2-352 (352)
111 cd05286 QOR2 Quinone oxidoredu 100.0 7.2E-31 1.6E-35 240.0 33.3 296 27-364 12-320 (320)
112 cd08273 MDR8 Medium chain dehy 100.0 5.1E-31 1.1E-35 242.9 32.5 299 19-362 2-330 (331)
113 cd08251 polyketide_synthase po 100.0 4.5E-31 9.8E-36 239.8 31.6 288 36-362 2-303 (303)
114 cd08271 MDR5 Medium chain dehy 100.0 6.1E-31 1.3E-35 241.5 32.6 308 18-364 1-325 (325)
115 cd05188 MDR Medium chain reduc 100.0 3.8E-31 8.3E-36 236.4 28.9 266 43-321 1-270 (271)
116 TIGR02824 quinone_pig3 putativ 100.0 2.2E-30 4.8E-35 237.5 33.8 306 19-364 2-325 (325)
117 cd08268 MDR2 Medium chain dehy 100.0 1.7E-29 3.8E-34 231.9 35.2 311 19-364 2-328 (328)
118 cd08241 QOR1 Quinone oxidoredu 100.0 1.2E-29 2.5E-34 232.5 32.9 305 18-363 1-323 (323)
119 cd05289 MDR_like_2 alcohol deh 100.0 3.7E-30 8E-35 234.4 29.3 301 18-362 1-309 (309)
120 cd08275 MDR3 Medium chain dehy 100.0 2.4E-29 5.2E-34 232.1 34.9 296 27-364 12-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 4.8E-30 1E-34 234.9 29.1 295 30-362 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 9.6E-29 2.1E-33 222.8 28.7 276 42-362 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 3.9E-28 8.4E-33 218.6 28.3 272 45-362 1-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 3.5E-28 7.6E-33 218.4 26.6 246 70-362 17-277 (277)
125 KOG1196 Predicted NAD-dependen 100.0 1.6E-26 3.4E-31 196.9 24.1 282 38-364 34-340 (343)
126 KOG1202 Animal-type fatty acid 99.9 2.1E-26 4.6E-31 223.8 17.9 292 27-364 1427-1741(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 4.8E-23 1E-27 157.9 8.6 109 41-152 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 3.5E-16 7.7E-21 123.9 13.8 128 192-324 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.4 2.2E-11 4.8E-16 113.1 18.7 172 170-362 188-374 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 1.1E-11 2.3E-16 118.0 16.0 155 179-334 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 7.4E-13 1.6E-17 104.3 4.2 117 225-362 1-127 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.6 1E-06 2.2E-11 84.1 12.9 130 180-311 162-314 (511)
133 PF11017 DUF2855: Protein of u 98.5 5.9E-06 1.3E-10 73.7 16.6 255 75-355 32-311 (314)
134 PRK11873 arsM arsenite S-adeno 98.5 1.7E-06 3.6E-11 77.5 12.0 173 176-362 72-259 (272)
135 PRK05476 S-adenosyl-L-homocyst 98.2 2.5E-05 5.4E-10 73.3 13.8 103 169-288 197-302 (425)
136 PRK08306 dipicolinate synthase 98.2 8.6E-05 1.9E-09 67.0 16.5 114 181-310 151-264 (296)
137 PRK00517 prmA ribosomal protei 98.2 6.1E-05 1.3E-09 66.4 15.0 132 136-287 77-215 (250)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.1 9.6E-06 2.1E-10 73.8 8.2 108 147-267 139-251 (311)
139 TIGR00936 ahcY adenosylhomocys 98.0 0.00013 2.9E-09 68.0 13.8 102 170-288 181-285 (406)
140 COG2518 Pcm Protein-L-isoaspar 98.0 0.0001 2.2E-09 61.8 10.9 112 161-284 52-168 (209)
141 TIGR01035 hemA glutamyl-tRNA r 97.9 7.8E-07 1.7E-11 84.2 -3.8 159 75-266 88-252 (417)
142 TIGR00518 alaDH alanine dehydr 97.8 0.00033 7.3E-09 65.3 13.2 96 181-286 166-268 (370)
143 PLN02494 adenosylhomocysteinas 97.8 0.00043 9.2E-09 65.4 12.4 100 171-287 241-343 (477)
144 PRK12771 putative glutamate sy 97.6 4.8E-05 1E-09 75.3 4.2 82 178-267 133-235 (564)
145 PRK00045 hemA glutamyl-tRNA re 97.6 0.00016 3.5E-09 68.8 7.1 160 75-266 90-254 (423)
146 PRK00377 cbiT cobalt-precorrin 97.6 0.0019 4.1E-08 54.8 12.6 103 174-284 33-144 (198)
147 PRK08324 short chain dehydroge 97.5 0.0012 2.7E-08 66.9 12.8 140 136-286 385-558 (681)
148 TIGR02853 spore_dpaA dipicolin 97.5 0.0029 6.3E-08 56.8 13.0 111 181-307 150-260 (287)
149 PTZ00075 Adenosylhomocysteinas 97.3 0.0016 3.5E-08 61.7 10.2 92 179-287 251-343 (476)
150 COG2242 CobL Precorrin-6B meth 97.3 0.0042 9.2E-08 51.1 11.3 102 175-285 28-135 (187)
151 PRK13943 protein-L-isoaspartat 97.3 0.0043 9.4E-08 56.5 11.8 103 173-284 72-179 (322)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.3 0.0098 2.1E-07 51.7 13.8 104 181-286 4-136 (238)
153 COG0300 DltE Short-chain dehyd 97.2 0.0032 7E-08 55.3 10.4 84 180-264 4-94 (265)
154 TIGR00406 prmA ribosomal prote 97.2 0.0032 7E-08 56.7 10.6 96 179-286 157-260 (288)
155 PF01135 PCMT: Protein-L-isoas 97.2 0.0014 3E-08 55.9 7.4 103 172-284 63-171 (209)
156 TIGR02469 CbiT precorrin-6Y C5 97.2 0.012 2.7E-07 45.3 12.1 102 175-284 13-121 (124)
157 PRK05993 short chain dehydroge 97.2 0.0043 9.4E-08 55.5 10.7 81 181-263 3-85 (277)
158 PF01488 Shikimate_DH: Shikima 97.1 0.0035 7.7E-08 49.5 8.5 74 180-265 10-86 (135)
159 PRK13942 protein-L-isoaspartat 97.1 0.012 2.6E-07 50.4 12.2 103 173-284 68-175 (212)
160 PRK12742 oxidoreductase; Provi 97.0 0.013 2.7E-07 51.0 12.4 79 181-264 5-85 (237)
161 COG3288 PntA NAD/NADP transhyd 97.0 0.0071 1.5E-07 53.3 10.0 131 180-311 162-310 (356)
162 COG3967 DltE Short-chain dehyd 97.0 0.0075 1.6E-07 50.2 9.4 81 181-264 4-88 (245)
163 PF12847 Methyltransf_18: Meth 96.9 0.0043 9.4E-08 47.0 7.3 94 181-284 1-110 (112)
164 TIGR00080 pimt protein-L-isoas 96.9 0.019 4E-07 49.4 11.7 103 173-284 69-176 (215)
165 COG4221 Short-chain alcohol de 96.8 0.013 2.8E-07 50.3 9.6 81 181-264 5-91 (246)
166 PRK08261 fabG 3-ketoacyl-(acyl 96.8 0.038 8.2E-07 53.2 14.2 103 181-286 209-343 (450)
167 PRK08017 oxidoreductase; Provi 96.8 0.015 3.2E-07 51.2 10.5 79 183-263 3-83 (256)
168 PRK11705 cyclopropane fatty ac 96.8 0.02 4.3E-07 53.8 11.6 99 175-285 161-267 (383)
169 PF02353 CMAS: Mycolic acid cy 96.7 0.0067 1.5E-07 54.0 8.0 99 174-284 55-165 (273)
170 TIGR00438 rrmJ cell division p 96.7 0.032 6.8E-07 46.8 11.8 101 177-285 28-146 (188)
171 PRK13944 protein-L-isoaspartat 96.7 0.055 1.2E-06 46.1 13.3 103 173-284 64-172 (205)
172 PRK14967 putative methyltransf 96.7 0.13 2.9E-06 44.4 15.7 99 174-284 29-158 (223)
173 PRK05693 short chain dehydroge 96.7 0.017 3.8E-07 51.5 10.6 78 183-263 2-81 (274)
174 COG0421 SpeE Spermidine syntha 96.6 0.024 5.2E-07 50.6 10.7 105 178-284 74-189 (282)
175 KOG1205 Predicted dehydrogenas 96.6 0.063 1.4E-06 47.7 13.1 104 181-286 11-150 (282)
176 KOG1209 1-Acyl dihydroxyaceton 96.6 0.049 1.1E-06 45.7 11.4 82 181-264 6-91 (289)
177 COG2230 Cfa Cyclopropane fatty 96.6 0.044 9.5E-07 48.6 11.8 101 175-288 66-179 (283)
178 PRK06182 short chain dehydroge 96.5 0.03 6.5E-07 49.9 11.1 81 181-264 2-84 (273)
179 PRK06139 short chain dehydroge 96.5 0.033 7.2E-07 51.2 11.1 82 181-264 6-94 (330)
180 PF13460 NAD_binding_10: NADH( 96.5 0.055 1.2E-06 44.9 11.6 90 185-285 1-97 (183)
181 PRK06057 short chain dehydroge 96.5 0.037 7.9E-07 48.8 10.9 81 181-264 6-89 (255)
182 COG2519 GCD14 tRNA(1-methylade 96.5 0.056 1.2E-06 46.7 11.4 104 174-286 87-196 (256)
183 PRK00107 gidB 16S rRNA methylt 96.4 0.048 1E-06 45.7 10.5 96 179-284 43-144 (187)
184 PRK07402 precorrin-6B methylas 96.4 0.089 1.9E-06 44.4 12.4 104 174-285 33-142 (196)
185 PF02826 2-Hacid_dh_C: D-isome 96.3 0.03 6.5E-07 46.5 9.1 90 180-286 34-128 (178)
186 PRK06949 short chain dehydroge 96.3 0.049 1.1E-06 47.9 11.0 82 180-263 7-95 (258)
187 PRK12939 short chain dehydroge 96.3 0.12 2.7E-06 45.0 13.4 82 181-264 6-94 (250)
188 PRK06463 fabG 3-ketoacyl-(acyl 96.3 0.042 9.1E-07 48.4 10.3 82 181-264 6-89 (255)
189 PLN02823 spermine synthase 96.3 0.051 1.1E-06 49.9 10.8 98 181-284 103-219 (336)
190 PRK07060 short chain dehydroge 96.3 0.049 1.1E-06 47.5 10.5 78 181-264 8-87 (245)
191 COG1748 LYS9 Saccharopine dehy 96.3 0.056 1.2E-06 50.2 11.1 96 183-286 2-100 (389)
192 PRK04457 spermidine synthase; 96.2 0.12 2.6E-06 45.8 12.8 96 180-283 65-175 (262)
193 PLN03209 translocon at the inn 96.2 0.088 1.9E-06 51.5 12.7 45 175-220 73-118 (576)
194 COG0686 Ald Alanine dehydrogen 96.2 0.022 4.8E-07 50.5 7.8 96 182-286 168-269 (371)
195 PRK07814 short chain dehydroge 96.2 0.059 1.3E-06 47.7 11.0 81 181-263 9-96 (263)
196 PRK00536 speE spermidine synth 96.2 0.021 4.5E-07 50.3 7.7 99 180-285 71-171 (262)
197 PRK08265 short chain dehydroge 96.2 0.11 2.5E-06 45.8 12.7 82 181-264 5-90 (261)
198 PRK07109 short chain dehydroge 96.2 0.15 3.2E-06 47.1 13.7 82 181-264 7-95 (334)
199 COG2226 UbiE Methylase involve 96.2 0.1 2.2E-06 45.3 11.7 107 175-290 45-161 (238)
200 PF06325 PrmA: Ribosomal prote 96.2 0.029 6.3E-07 50.4 8.6 137 136-287 118-261 (295)
201 PRK07825 short chain dehydroge 96.2 0.052 1.1E-06 48.3 10.3 81 182-264 5-88 (273)
202 KOG1201 Hydroxysteroid 17-beta 96.2 0.068 1.5E-06 47.4 10.5 82 180-264 36-124 (300)
203 COG4122 Predicted O-methyltran 96.1 0.16 3.5E-06 43.4 12.5 104 177-285 55-166 (219)
204 PRK07806 short chain dehydroge 96.1 0.16 3.5E-06 44.3 13.3 104 181-286 5-135 (248)
205 PRK08261 fabG 3-ketoacyl-(acyl 96.1 0.016 3.5E-07 55.8 7.3 91 176-286 28-124 (450)
206 PRK00811 spermidine synthase; 96.1 0.034 7.4E-07 49.9 8.8 98 180-285 75-191 (283)
207 PRK07326 short chain dehydroge 96.1 0.15 3.3E-06 44.1 12.8 82 181-264 5-92 (237)
208 PRK08177 short chain dehydroge 96.1 0.056 1.2E-06 46.6 9.9 78 183-264 2-81 (225)
209 PRK05866 short chain dehydroge 96.1 0.084 1.8E-06 47.7 11.3 82 181-264 39-127 (293)
210 PRK06200 2,3-dihydroxy-2,3-dih 96.0 0.089 1.9E-06 46.5 11.1 81 181-263 5-89 (263)
211 PF01262 AlaDh_PNT_C: Alanine 96.0 0.029 6.2E-07 46.2 7.3 100 182-286 20-140 (168)
212 PRK06196 oxidoreductase; Provi 96.0 0.067 1.4E-06 48.9 10.3 81 181-263 25-108 (315)
213 PRK12828 short chain dehydroge 96.0 0.078 1.7E-06 45.9 10.3 80 181-263 6-91 (239)
214 PRK07677 short chain dehydroge 96.0 0.082 1.8E-06 46.4 10.5 80 182-263 1-87 (252)
215 PRK05872 short chain dehydroge 96.0 0.071 1.5E-06 48.2 10.3 81 181-264 8-95 (296)
216 PRK07533 enoyl-(acyl carrier p 95.9 0.094 2E-06 46.3 10.8 81 181-263 9-97 (258)
217 TIGR02356 adenyl_thiF thiazole 95.9 0.16 3.5E-06 43.1 11.7 35 181-215 20-54 (202)
218 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.12 2.6E-06 45.2 11.4 81 181-263 4-91 (253)
219 PRK01581 speE spermidine synth 95.9 0.22 4.8E-06 45.9 13.0 98 180-285 149-268 (374)
220 PRK07831 short chain dehydroge 95.9 0.1 2.3E-06 46.0 11.0 84 179-264 14-107 (262)
221 TIGR03325 BphB_TodD cis-2,3-di 95.9 0.083 1.8E-06 46.7 10.3 81 181-263 4-88 (262)
222 PRK06841 short chain dehydroge 95.9 0.11 2.3E-06 45.7 10.9 82 181-264 14-99 (255)
223 TIGR00446 nop2p NOL1/NOP2/sun 95.9 0.33 7.2E-06 43.1 14.0 102 176-286 66-200 (264)
224 PRK06505 enoyl-(acyl carrier p 95.9 0.098 2.1E-06 46.6 10.7 82 181-264 6-95 (271)
225 TIGR01832 kduD 2-deoxy-D-gluco 95.8 0.14 2.9E-06 44.8 11.4 82 181-264 4-90 (248)
226 PRK08317 hypothetical protein; 95.8 0.16 3.5E-06 44.0 11.7 104 174-285 12-124 (241)
227 PRK06500 short chain dehydroge 95.8 0.099 2.2E-06 45.6 10.3 82 181-264 5-90 (249)
228 PRK06128 oxidoreductase; Provi 95.8 0.3 6.4E-06 44.2 13.7 103 181-285 54-191 (300)
229 PRK00312 pcm protein-L-isoaspa 95.8 0.21 4.6E-06 42.7 12.0 101 173-284 70-174 (212)
230 cd05311 NAD_bind_2_malic_enz N 95.8 0.24 5.1E-06 42.9 12.2 92 180-285 23-128 (226)
231 PRK06198 short chain dehydroge 95.8 0.12 2.7E-06 45.4 10.8 83 181-264 5-94 (260)
232 PRK07832 short chain dehydroge 95.8 0.31 6.7E-06 43.3 13.5 78 184-264 2-88 (272)
233 PRK12829 short chain dehydroge 95.7 0.098 2.1E-06 46.1 10.2 83 180-264 9-96 (264)
234 PF00106 adh_short: short chai 95.7 0.057 1.2E-06 44.0 8.0 80 184-264 2-90 (167)
235 PRK08862 short chain dehydroge 95.7 0.12 2.6E-06 44.7 10.4 82 181-263 4-92 (227)
236 PLN02366 spermidine synthase 95.7 0.094 2E-06 47.6 9.9 100 179-285 89-206 (308)
237 PRK09186 flagellin modificatio 95.7 0.25 5.5E-06 43.3 12.6 81 181-263 3-92 (256)
238 PRK03369 murD UDP-N-acetylmura 95.7 0.069 1.5E-06 52.0 9.7 73 179-265 9-81 (488)
239 PRK06484 short chain dehydroge 95.7 0.29 6.3E-06 48.0 14.2 104 181-286 268-401 (520)
240 cd01065 NAD_bind_Shikimate_DH 95.7 0.12 2.6E-06 41.6 9.7 101 174-286 10-117 (155)
241 PRK05867 short chain dehydroge 95.7 0.13 2.8E-06 45.2 10.6 82 181-264 8-96 (253)
242 PRK06603 enoyl-(acyl carrier p 95.7 0.13 2.8E-06 45.5 10.7 81 181-263 7-95 (260)
243 COG2264 PrmA Ribosomal protein 95.7 0.13 2.9E-06 45.9 10.5 98 179-286 160-264 (300)
244 PRK06180 short chain dehydroge 95.7 0.15 3.2E-06 45.6 11.0 82 181-264 3-88 (277)
245 PRK07062 short chain dehydroge 95.7 0.13 2.8E-06 45.5 10.6 82 181-264 7-97 (265)
246 PF00670 AdoHcyase_NAD: S-aden 95.7 0.19 4.1E-06 40.7 10.3 92 178-286 19-111 (162)
247 PRK13940 glutamyl-tRNA reducta 95.7 0.12 2.6E-06 48.9 10.8 76 180-267 179-255 (414)
248 PRK12937 short chain dehydroge 95.6 0.34 7.3E-06 42.1 13.0 105 181-286 4-140 (245)
249 PF03435 Saccharop_dh: Sacchar 95.6 0.1 2.2E-06 49.2 10.1 93 185-284 1-97 (386)
250 PRK04266 fibrillarin; Provisio 95.6 0.33 7.2E-06 42.0 12.5 104 175-284 66-175 (226)
251 PRK08267 short chain dehydroge 95.6 0.13 2.9E-06 45.3 10.4 81 183-264 2-87 (260)
252 PRK07231 fabG 3-ketoacyl-(acyl 95.6 0.15 3.3E-06 44.5 10.7 82 181-264 4-91 (251)
253 PRK07502 cyclohexadienyl dehyd 95.6 0.19 4.1E-06 45.7 11.6 90 183-285 7-100 (307)
254 CHL00194 ycf39 Ycf39; Provisio 95.6 0.18 3.8E-06 46.1 11.4 94 184-286 2-110 (317)
255 PRK08589 short chain dehydroge 95.6 0.16 3.4E-06 45.3 10.8 82 181-264 5-92 (272)
256 PRK06483 dihydromonapterin red 95.6 0.17 3.8E-06 43.8 10.9 80 182-264 2-84 (236)
257 PRK09072 short chain dehydroge 95.6 0.18 3.9E-06 44.6 11.1 81 181-264 4-90 (263)
258 PRK07774 short chain dehydroge 95.6 0.18 3.8E-06 44.1 11.0 82 181-264 5-93 (250)
259 PF08704 GCD14: tRNA methyltra 95.6 0.12 2.6E-06 45.2 9.6 108 174-286 33-147 (247)
260 PRK08642 fabG 3-ketoacyl-(acyl 95.5 0.12 2.7E-06 45.1 10.0 82 182-263 5-90 (253)
261 TIGR01470 cysG_Nterm siroheme 95.5 0.48 1E-05 40.3 13.1 92 181-285 8-100 (205)
262 PRK07574 formate dehydrogenase 95.5 0.25 5.5E-06 46.3 12.2 92 181-288 191-287 (385)
263 PRK08703 short chain dehydroge 95.5 0.15 3.2E-06 44.4 10.2 83 181-264 5-97 (239)
264 PRK08415 enoyl-(acyl carrier p 95.5 0.19 4.1E-06 44.9 11.0 104 181-286 4-144 (274)
265 PLN02780 ketoreductase/ oxidor 95.5 0.12 2.6E-06 47.3 9.9 79 181-263 52-141 (320)
266 PRK08340 glucose-1-dehydrogena 95.5 0.19 4.2E-06 44.2 11.0 79 184-264 2-86 (259)
267 PRK08339 short chain dehydroge 95.5 0.14 3.1E-06 45.3 10.1 81 181-264 7-95 (263)
268 PRK08628 short chain dehydroge 95.5 0.17 3.7E-06 44.5 10.6 82 181-264 6-93 (258)
269 TIGR00417 speE spermidine synt 95.4 0.31 6.7E-06 43.5 12.2 99 180-285 71-186 (270)
270 PRK08287 cobalt-precorrin-6Y C 95.4 0.36 7.9E-06 40.3 12.0 99 175-284 25-130 (187)
271 PRK08618 ornithine cyclodeamin 95.4 0.61 1.3E-05 42.8 14.4 99 175-288 120-224 (325)
272 COG0031 CysK Cysteine synthase 95.4 0.53 1.2E-05 42.2 13.3 57 175-231 55-113 (300)
273 PRK07453 protochlorophyllide o 95.4 0.19 4.1E-06 46.0 11.1 81 181-263 5-92 (322)
274 PRK07523 gluconate 5-dehydroge 95.4 0.14 3E-06 45.0 9.8 82 181-264 9-97 (255)
275 PRK07576 short chain dehydroge 95.4 0.23 4.9E-06 44.0 11.2 81 181-263 8-95 (264)
276 PRK07478 short chain dehydroge 95.4 0.22 4.7E-06 43.7 11.0 82 181-264 5-93 (254)
277 PRK05854 short chain dehydroge 95.4 0.16 3.4E-06 46.4 10.3 82 181-264 13-103 (313)
278 PRK08643 acetoin reductase; Va 95.4 0.21 4.5E-06 43.9 10.8 81 182-264 2-89 (256)
279 PRK08594 enoyl-(acyl carrier p 95.4 0.47 1E-05 41.8 13.1 81 181-263 6-96 (257)
280 TIGR00563 rsmB ribosomal RNA s 95.3 0.35 7.6E-06 46.2 12.9 106 174-286 231-369 (426)
281 PRK14901 16S rRNA methyltransf 95.3 0.25 5.4E-06 47.3 11.8 106 175-285 246-384 (434)
282 PRK07024 short chain dehydroge 95.3 0.18 3.9E-06 44.4 10.3 80 182-263 2-87 (257)
283 TIGR01809 Shik-DH-AROM shikima 95.3 0.087 1.9E-06 47.3 8.2 75 181-264 124-200 (282)
284 PRK12823 benD 1,6-dihydroxycyc 95.3 0.19 4.2E-06 44.2 10.4 81 181-263 7-93 (260)
285 PRK01683 trans-aconitate 2-met 95.3 0.31 6.7E-06 43.1 11.6 99 174-284 24-129 (258)
286 PRK07063 short chain dehydroge 95.3 0.16 3.6E-06 44.7 9.9 82 181-264 6-96 (260)
287 PRK08690 enoyl-(acyl carrier p 95.3 0.23 4.9E-06 44.0 10.7 82 181-264 5-94 (261)
288 PRK05717 oxidoreductase; Valid 95.2 0.26 5.6E-06 43.3 11.0 82 181-264 9-94 (255)
289 PRK12481 2-deoxy-D-gluconate 3 95.2 0.27 5.8E-06 43.2 11.0 82 181-264 7-93 (251)
290 PLN02233 ubiquinone biosynthes 95.2 0.46 9.9E-06 42.1 12.4 104 175-287 67-184 (261)
291 PRK06079 enoyl-(acyl carrier p 95.2 0.23 5.1E-06 43.6 10.6 81 181-263 6-92 (252)
292 PRK07035 short chain dehydroge 95.2 0.26 5.7E-06 43.1 10.9 81 181-263 7-94 (252)
293 PRK04148 hypothetical protein; 95.2 0.14 3.1E-06 40.0 7.9 93 180-284 15-108 (134)
294 PRK13394 3-hydroxybutyrate deh 95.2 0.29 6.3E-06 43.0 11.2 82 181-264 6-94 (262)
295 PRK07904 short chain dehydroge 95.2 0.26 5.7E-06 43.3 10.9 83 179-264 5-97 (253)
296 PRK07454 short chain dehydroge 95.2 0.31 6.7E-06 42.3 11.3 82 181-264 5-93 (241)
297 PLN02244 tocopherol O-methyltr 95.2 0.39 8.4E-06 44.4 12.3 97 180-285 117-223 (340)
298 PLN03139 formate dehydrogenase 95.2 0.35 7.5E-06 45.3 11.9 91 181-287 198-293 (386)
299 PRK08159 enoyl-(acyl carrier p 95.2 0.25 5.5E-06 44.0 10.8 82 180-263 8-97 (272)
300 PRK07984 enoyl-(acyl carrier p 95.2 0.26 5.6E-06 43.7 10.8 81 181-263 5-93 (262)
301 PRK06179 short chain dehydroge 95.2 0.087 1.9E-06 46.8 7.8 78 182-264 4-83 (270)
302 PLN03075 nicotianamine synthas 95.2 0.2 4.2E-06 45.0 9.8 98 180-284 122-232 (296)
303 PRK06935 2-deoxy-D-gluconate 3 95.2 0.28 6E-06 43.2 11.0 82 181-264 14-101 (258)
304 PRK14103 trans-aconitate 2-met 95.2 0.34 7.4E-06 42.7 11.5 98 173-284 21-125 (255)
305 PRK07890 short chain dehydroge 95.2 0.27 5.9E-06 43.1 10.9 82 181-264 4-92 (258)
306 PF13241 NAD_binding_7: Putati 95.2 0.18 3.9E-06 37.7 8.2 87 181-286 6-92 (103)
307 PRK08226 short chain dehydroge 95.2 0.28 6.1E-06 43.2 11.0 81 181-263 5-91 (263)
308 PRK14903 16S rRNA methyltransf 95.1 0.56 1.2E-05 44.8 13.6 104 175-286 231-367 (431)
309 PTZ00098 phosphoethanolamine N 95.1 0.35 7.7E-06 42.9 11.5 105 173-286 44-157 (263)
310 PRK06172 short chain dehydroge 95.1 0.28 6.2E-06 42.9 10.9 82 181-264 6-94 (253)
311 PF01209 Ubie_methyltran: ubiE 95.1 0.12 2.5E-06 45.0 8.1 105 175-288 41-156 (233)
312 PRK06953 short chain dehydroge 95.1 0.18 4E-06 43.2 9.5 77 183-264 2-80 (222)
313 TIGR00138 gidB 16S rRNA methyl 95.1 0.21 4.5E-06 41.6 9.4 94 181-284 42-141 (181)
314 COG0169 AroE Shikimate 5-dehyd 95.1 0.081 1.7E-06 47.2 7.2 47 180-226 124-171 (283)
315 PLN02253 xanthoxin dehydrogena 95.1 0.22 4.7E-06 44.5 10.2 82 181-264 17-104 (280)
316 PRK07985 oxidoreductase; Provi 95.1 0.61 1.3E-05 42.1 13.2 81 181-263 48-137 (294)
317 PRK05875 short chain dehydroge 95.1 0.3 6.4E-06 43.5 11.0 81 181-263 6-95 (276)
318 PRK08213 gluconate 5-dehydroge 95.1 0.31 6.7E-06 42.9 11.0 82 181-264 11-99 (259)
319 PRK08063 enoyl-(acyl carrier p 95.1 0.25 5.5E-06 43.1 10.4 83 181-264 3-92 (250)
320 PRK12743 oxidoreductase; Provi 95.0 0.28 6.1E-06 43.1 10.6 81 182-263 2-89 (256)
321 PRK12384 sorbitol-6-phosphate 95.0 0.3 6.6E-06 42.9 10.8 80 182-263 2-90 (259)
322 PRK06138 short chain dehydroge 95.0 0.25 5.4E-06 43.2 10.1 82 181-264 4-91 (252)
323 TIGR03840 TMPT_Se_Te thiopurin 95.0 0.48 1E-05 40.6 11.4 101 179-286 32-153 (213)
324 PRK05653 fabG 3-ketoacyl-(acyl 95.0 0.33 7.2E-06 42.0 10.8 82 181-264 4-92 (246)
325 PRK14904 16S rRNA methyltransf 94.9 0.51 1.1E-05 45.4 12.8 104 173-286 242-378 (445)
326 PRK06114 short chain dehydroge 94.9 0.36 7.8E-06 42.4 11.0 82 181-264 7-96 (254)
327 COG2227 UbiG 2-polyprenyl-3-me 94.9 0.3 6.5E-06 42.0 9.8 96 180-285 58-161 (243)
328 PRK12429 3-hydroxybutyrate deh 94.9 0.29 6.3E-06 42.9 10.4 81 181-263 3-90 (258)
329 PRK06194 hypothetical protein; 94.9 0.23 5.1E-06 44.4 10.0 82 181-264 5-93 (287)
330 PF01596 Methyltransf_3: O-met 94.9 0.25 5.5E-06 41.9 9.5 103 180-285 44-155 (205)
331 PRK12747 short chain dehydroge 94.9 0.58 1.3E-05 40.9 12.3 31 181-212 3-34 (252)
332 PRK06719 precorrin-2 dehydroge 94.9 0.65 1.4E-05 37.7 11.5 87 181-283 12-98 (157)
333 PRK05876 short chain dehydroge 94.9 0.23 5.1E-06 44.3 9.8 81 181-263 5-92 (275)
334 PRK06398 aldose dehydrogenase; 94.9 0.19 4.1E-06 44.3 9.1 76 181-264 5-82 (258)
335 PRK06077 fabG 3-ketoacyl-(acyl 94.9 0.94 2E-05 39.5 13.6 104 182-286 6-141 (252)
336 PRK06197 short chain dehydroge 94.9 0.23 5.1E-06 45.0 9.9 81 181-263 15-104 (306)
337 PRK08277 D-mannonate oxidoredu 94.9 0.35 7.6E-06 43.1 10.9 81 181-263 9-96 (278)
338 PRK12549 shikimate 5-dehydroge 94.9 0.19 4.2E-06 45.1 9.1 43 180-222 125-167 (284)
339 PRK08416 7-alpha-hydroxysteroi 94.9 0.33 7.1E-06 42.8 10.6 81 181-263 7-96 (260)
340 PRK06701 short chain dehydroge 94.8 0.73 1.6E-05 41.5 12.9 83 180-264 44-134 (290)
341 PRK11207 tellurite resistance 94.8 0.18 3.9E-06 42.6 8.4 98 175-284 24-133 (197)
342 PRK14902 16S rRNA methyltransf 94.8 0.55 1.2E-05 45.1 12.7 103 175-285 244-379 (444)
343 PRK08264 short chain dehydroge 94.8 0.17 3.6E-06 43.9 8.5 77 181-264 5-83 (238)
344 PRK08220 2,3-dihydroxybenzoate 94.8 0.64 1.4E-05 40.6 12.3 77 181-264 7-86 (252)
345 PRK07856 short chain dehydroge 94.8 0.3 6.4E-06 42.8 10.1 77 181-263 5-84 (252)
346 PRK06181 short chain dehydroge 94.8 0.42 9.2E-06 42.1 11.1 81 182-264 1-88 (263)
347 PRK08993 2-deoxy-D-gluconate 3 94.8 0.38 8.3E-06 42.2 10.8 82 181-264 9-95 (253)
348 KOG0725 Reductases with broad 94.8 0.22 4.8E-06 44.3 9.1 84 180-264 6-99 (270)
349 PRK08251 short chain dehydroge 94.8 0.43 9.4E-06 41.6 11.0 80 182-263 2-90 (248)
350 cd01078 NAD_bind_H4MPT_DH NADP 94.7 0.55 1.2E-05 39.5 11.1 77 181-266 27-109 (194)
351 TIGR03206 benzo_BadH 2-hydroxy 94.7 0.43 9.3E-06 41.6 11.0 81 181-263 2-89 (250)
352 PRK10538 malonic semialdehyde 94.7 0.34 7.5E-06 42.3 10.3 79 184-264 2-84 (248)
353 PRK06720 hypothetical protein; 94.7 0.7 1.5E-05 38.0 11.4 81 181-263 15-102 (169)
354 PRK09291 short chain dehydroge 94.7 0.093 2E-06 46.1 6.7 75 182-263 2-82 (257)
355 PRK08085 gluconate 5-dehydroge 94.7 0.34 7.3E-06 42.5 10.2 82 181-264 8-96 (254)
356 cd00755 YgdL_like Family of ac 94.7 0.2 4.4E-06 43.4 8.4 92 182-279 11-127 (231)
357 PRK11933 yebU rRNA (cytosine-C 94.7 0.98 2.1E-05 43.5 13.7 100 178-285 110-242 (470)
358 TIGR02355 moeB molybdopterin s 94.7 0.46 9.9E-06 41.5 10.7 33 182-214 24-56 (240)
359 PRK11036 putative S-adenosyl-L 94.6 0.57 1.2E-05 41.3 11.5 95 180-284 43-148 (255)
360 PRK07791 short chain dehydroge 94.6 0.4 8.6E-06 43.1 10.6 83 180-264 4-102 (286)
361 PRK07067 sorbitol dehydrogenas 94.6 0.37 8.1E-06 42.3 10.3 81 181-263 5-89 (257)
362 PF00899 ThiF: ThiF family; I 94.6 0.45 9.7E-06 37.4 9.7 94 182-282 2-120 (135)
363 cd01483 E1_enzyme_family Super 94.6 0.84 1.8E-05 36.2 11.3 91 184-280 1-115 (143)
364 PRK03612 spermidine synthase; 94.6 0.48 1E-05 46.5 11.7 101 180-285 296-415 (521)
365 PRK09242 tropinone reductase; 94.6 0.35 7.6E-06 42.5 10.0 82 181-264 8-98 (257)
366 PRK07688 thiamine/molybdopteri 94.6 0.58 1.3E-05 43.2 11.6 34 182-215 24-57 (339)
367 PRK08263 short chain dehydroge 94.6 0.5 1.1E-05 42.1 11.1 81 182-264 3-87 (275)
368 PLN02476 O-methyltransferase 94.5 1 2.2E-05 40.1 12.6 106 177-285 114-228 (278)
369 PRK08644 thiamine biosynthesis 94.5 0.68 1.5E-05 39.6 11.2 35 181-215 27-61 (212)
370 PLN02781 Probable caffeoyl-CoA 94.5 0.82 1.8E-05 39.8 11.9 106 177-285 64-178 (234)
371 PRK06914 short chain dehydroge 94.5 0.48 1E-05 42.2 10.9 80 182-264 3-91 (280)
372 PRK12936 3-ketoacyl-(acyl-carr 94.5 0.43 9.4E-06 41.4 10.4 82 181-264 5-90 (245)
373 PRK06482 short chain dehydroge 94.5 0.53 1.1E-05 41.9 11.0 80 183-264 3-86 (276)
374 PF02670 DXP_reductoisom: 1-de 94.5 0.48 1E-05 36.8 9.2 95 185-283 1-119 (129)
375 cd01487 E1_ThiF_like E1_ThiF_l 94.5 0.57 1.2E-05 38.7 10.3 33 184-216 1-33 (174)
376 PF01564 Spermine_synth: Sperm 94.5 0.4 8.7E-06 42.0 9.9 95 181-285 76-191 (246)
377 PRK05690 molybdopterin biosynt 94.5 0.62 1.3E-05 40.9 11.1 34 181-214 31-64 (245)
378 PRK12367 short chain dehydroge 94.4 0.33 7.2E-06 42.6 9.4 75 181-264 13-89 (245)
379 PRK05884 short chain dehydroge 94.4 0.27 5.8E-06 42.4 8.7 75 184-263 2-78 (223)
380 PRK06523 short chain dehydroge 94.4 0.36 7.7E-06 42.5 9.8 76 181-263 8-86 (260)
381 PRK12475 thiamine/molybdopteri 94.4 0.68 1.5E-05 42.7 11.7 34 182-215 24-57 (338)
382 PRK09134 short chain dehydroge 94.4 0.53 1.2E-05 41.4 10.8 83 181-264 8-97 (258)
383 PRK09730 putative NAD(P)-bindi 94.4 0.44 9.5E-06 41.4 10.2 81 183-264 2-89 (247)
384 PRK06718 precorrin-2 dehydroge 94.4 1.2 2.5E-05 37.8 12.3 90 181-285 9-100 (202)
385 COG0373 HemA Glutamyl-tRNA red 94.4 0.4 8.7E-06 45.0 10.1 73 180-265 176-249 (414)
386 PRK12938 acetyacetyl-CoA reduc 94.4 0.56 1.2E-05 40.8 10.8 83 181-264 2-91 (246)
387 PRK06113 7-alpha-hydroxysteroi 94.3 0.62 1.3E-05 40.9 11.0 82 181-264 10-98 (255)
388 PRK07097 gluconate 5-dehydroge 94.3 0.64 1.4E-05 41.1 11.1 82 181-264 9-97 (265)
389 PRK10901 16S rRNA methyltransf 94.3 1.2 2.7E-05 42.5 13.6 107 170-285 233-372 (427)
390 PRK06997 enoyl-(acyl carrier p 94.3 0.52 1.1E-05 41.6 10.5 82 181-264 5-94 (260)
391 PRK06125 short chain dehydroge 94.3 0.6 1.3E-05 41.1 10.8 79 181-264 6-91 (259)
392 PRK08303 short chain dehydroge 94.3 0.63 1.4E-05 42.3 11.1 81 181-263 7-105 (305)
393 TIGR02354 thiF_fam2 thiamine b 94.2 1 2.2E-05 38.2 11.5 34 182-215 21-54 (200)
394 COG0144 Sun tRNA and rRNA cyto 94.2 0.77 1.7E-05 42.7 11.7 103 175-286 150-289 (355)
395 TIGR02752 MenG_heptapren 2-hep 94.2 0.65 1.4E-05 40.1 10.8 103 175-286 39-152 (231)
396 PRK07775 short chain dehydroge 94.2 0.65 1.4E-05 41.3 11.0 81 182-264 10-97 (274)
397 PRK12826 3-ketoacyl-(acyl-carr 94.2 0.62 1.3E-05 40.5 10.7 82 181-264 5-93 (251)
398 PF08241 Methyltransf_11: Meth 94.2 0.4 8.7E-06 34.5 8.1 84 188-283 3-95 (95)
399 PRK11761 cysM cysteine synthas 94.2 2 4.4E-05 38.8 14.1 57 175-231 56-114 (296)
400 PRK12825 fabG 3-ketoacyl-(acyl 94.2 0.47 1E-05 41.1 9.9 82 181-263 5-93 (249)
401 PRK08300 acetaldehyde dehydrog 94.2 0.59 1.3E-05 42.1 10.3 93 183-285 5-101 (302)
402 PRK11188 rrmJ 23S rRNA methylt 94.1 0.83 1.8E-05 39.0 11.0 98 179-284 49-164 (209)
403 PRK06124 gluconate 5-dehydroge 94.1 0.79 1.7E-05 40.2 11.3 82 181-264 10-98 (256)
404 PRK07666 fabG 3-ketoacyl-(acyl 94.1 0.46 9.9E-06 41.2 9.7 82 181-264 6-94 (239)
405 TIGR01318 gltD_gamma_fam gluta 94.1 0.26 5.6E-06 47.8 8.7 78 180-265 139-237 (467)
406 PRK07074 short chain dehydroge 94.1 0.74 1.6E-05 40.4 11.1 81 182-264 2-87 (257)
407 TIGR01963 PHB_DH 3-hydroxybuty 94.1 0.67 1.5E-05 40.5 10.7 79 183-263 2-87 (255)
408 TIGR03215 ac_ald_DH_ac acetald 94.1 0.76 1.6E-05 41.2 10.8 89 184-284 3-94 (285)
409 cd01075 NAD_bind_Leu_Phe_Val_D 94.0 1.2 2.6E-05 37.8 11.6 81 180-276 26-107 (200)
410 PRK06484 short chain dehydroge 94.0 0.44 9.6E-06 46.8 10.4 82 181-264 4-89 (520)
411 PTZ00146 fibrillarin; Provisio 94.0 0.81 1.8E-05 41.0 10.9 103 173-284 124-236 (293)
412 PRK07424 bifunctional sterol d 94.0 0.52 1.1E-05 44.6 10.2 76 181-264 177-255 (406)
413 PRK13243 glyoxylate reductase; 94.0 0.87 1.9E-05 41.9 11.5 90 181-288 149-243 (333)
414 PRK12935 acetoacetyl-CoA reduc 93.9 0.67 1.5E-05 40.3 10.4 83 181-264 5-94 (247)
415 PRK05597 molybdopterin biosynt 93.9 0.79 1.7E-05 42.6 11.2 35 181-215 27-61 (355)
416 PRK06947 glucose-1-dehydrogena 93.9 0.62 1.3E-05 40.6 10.2 80 183-263 3-89 (248)
417 PRK07577 short chain dehydroge 93.9 0.41 8.9E-06 41.3 9.0 74 182-264 3-78 (234)
418 PRK08936 glucose-1-dehydrogena 93.9 0.66 1.4E-05 40.9 10.4 82 181-264 6-95 (261)
419 PRK06101 short chain dehydroge 93.9 0.61 1.3E-05 40.5 10.0 41 183-224 2-43 (240)
420 PRK12749 quinate/shikimate deh 93.9 0.53 1.1E-05 42.4 9.6 36 181-216 123-158 (288)
421 PRK12550 shikimate 5-dehydroge 93.9 0.32 7E-06 43.3 8.2 54 173-226 113-167 (272)
422 PRK09135 pteridine reductase; 93.9 0.77 1.7E-05 39.9 10.6 81 181-263 5-94 (249)
423 PRK05557 fabG 3-ketoacyl-(acyl 93.9 0.79 1.7E-05 39.7 10.7 83 181-264 4-93 (248)
424 PRK05650 short chain dehydroge 93.8 0.77 1.7E-05 40.7 10.7 79 184-264 2-87 (270)
425 PRK08945 putative oxoacyl-(acy 93.8 0.56 1.2E-05 40.9 9.8 84 179-264 9-102 (247)
426 PRK08328 hypothetical protein; 93.8 0.85 1.8E-05 39.6 10.6 34 181-214 26-59 (231)
427 PRK00121 trmB tRNA (guanine-N( 93.8 0.5 1.1E-05 40.1 9.0 98 181-284 40-155 (202)
428 TIGR01289 LPOR light-dependent 93.8 0.68 1.5E-05 42.2 10.5 81 182-264 3-91 (314)
429 TIGR01829 AcAcCoA_reduct aceto 93.8 0.47 1E-05 41.1 9.1 80 183-264 1-88 (242)
430 PRK15116 sulfur acceptor prote 93.8 1.5 3.2E-05 38.9 12.1 35 181-215 29-63 (268)
431 PRK12809 putative oxidoreducta 93.8 0.32 7E-06 49.1 9.0 77 181-265 309-406 (639)
432 PRK12744 short chain dehydroge 93.8 0.67 1.4E-05 40.7 10.2 83 181-264 7-99 (257)
433 PRK07340 ornithine cyclodeamin 93.8 0.88 1.9E-05 41.3 11.0 100 174-288 117-220 (304)
434 KOG1200 Mitochondrial/plastidi 93.8 0.79 1.7E-05 38.1 9.4 80 183-264 15-100 (256)
435 TIGR00507 aroE shikimate 5-deh 93.8 1 2.2E-05 40.1 11.3 114 179-306 114-234 (270)
436 PF01113 DapB_N: Dihydrodipico 93.7 1.3 2.7E-05 34.4 10.4 92 184-288 2-100 (124)
437 PRK12548 shikimate 5-dehydroge 93.7 0.5 1.1E-05 42.6 9.3 37 180-216 124-160 (289)
438 KOG3201 Uncharacterized conser 93.7 0.3 6.5E-06 39.2 6.7 154 169-325 17-182 (201)
439 PRK05562 precorrin-2 dehydroge 93.6 3.1 6.8E-05 35.8 13.3 92 181-285 24-116 (223)
440 PRK07370 enoyl-(acyl carrier p 93.6 0.52 1.1E-05 41.6 9.1 104 181-286 5-148 (258)
441 cd00757 ThiF_MoeB_HesA_family 93.5 1.3 2.9E-05 38.3 11.4 32 182-213 21-52 (228)
442 PRK05855 short chain dehydroge 93.5 0.72 1.6E-05 45.8 11.0 82 181-264 314-402 (582)
443 PRK07792 fabG 3-ketoacyl-(acyl 93.5 0.76 1.6E-05 41.7 10.2 81 181-264 11-99 (306)
444 TIGR00477 tehB tellurite resis 93.5 0.56 1.2E-05 39.5 8.7 94 177-284 26-132 (195)
445 TIGR01138 cysM cysteine syntha 93.4 3.4 7.3E-05 37.3 14.1 56 175-230 52-109 (290)
446 PRK13656 trans-2-enoyl-CoA red 93.4 0.97 2.1E-05 42.1 10.6 82 181-265 40-142 (398)
447 PLN03013 cysteine synthase 93.4 2.7 6E-05 39.9 13.8 56 175-230 167-225 (429)
448 PRK12769 putative oxidoreducta 93.3 0.34 7.3E-06 49.1 8.3 35 180-215 325-359 (654)
449 PRK06171 sorbitol-6-phosphate 93.3 0.56 1.2E-05 41.4 8.9 77 181-263 8-86 (266)
450 PRK06123 short chain dehydroge 93.3 0.99 2.2E-05 39.2 10.4 82 182-264 2-90 (248)
451 COG1052 LdhA Lactate dehydroge 93.3 2.1 4.5E-05 39.2 12.5 90 181-288 145-239 (324)
452 PRK08762 molybdopterin biosynt 93.3 1.1 2.4E-05 42.0 11.2 35 181-215 134-168 (376)
453 PRK07889 enoyl-(acyl carrier p 93.3 1.1 2.4E-05 39.4 10.7 82 181-264 6-95 (256)
454 PRK12746 short chain dehydroge 93.2 0.94 2E-05 39.6 10.2 83 182-264 6-100 (254)
455 PF03446 NAD_binding_2: NAD bi 93.2 1.6 3.5E-05 35.5 10.8 87 184-286 3-95 (163)
456 PRK00216 ubiE ubiquinone/menaq 93.2 2.1 4.5E-05 37.0 12.2 104 175-286 45-159 (239)
457 PRK15469 ghrA bifunctional gly 93.2 0.87 1.9E-05 41.5 9.9 89 181-287 135-228 (312)
458 cd01080 NAD_bind_m-THF_DH_Cycl 93.1 0.71 1.5E-05 37.9 8.4 78 179-288 41-119 (168)
459 PLN02657 3,8-divinyl protochlo 93.1 1.2 2.6E-05 42.0 11.2 39 178-217 56-95 (390)
460 PF01118 Semialdhyde_dh: Semia 93.1 0.61 1.3E-05 35.9 7.7 92 184-287 1-99 (121)
461 cd05211 NAD_bind_Glu_Leu_Phe_V 93.1 1.3 2.9E-05 38.0 10.4 78 180-265 21-108 (217)
462 PRK14175 bifunctional 5,10-met 93.1 0.57 1.2E-05 41.9 8.4 86 171-288 146-233 (286)
463 PRK05599 hypothetical protein; 93.1 1.2 2.5E-05 39.0 10.5 78 184-264 2-87 (246)
464 TIGR02632 RhaD_aldol-ADH rhamn 93.0 1 2.2E-05 45.8 11.1 82 181-264 413-503 (676)
465 PRK12827 short chain dehydroge 93.0 1.1 2.4E-05 38.9 10.1 31 181-212 5-36 (249)
466 PLN00141 Tic62-NAD(P)-related 92.9 1 2.2E-05 39.5 9.8 97 182-286 17-132 (251)
467 PRK07102 short chain dehydroge 92.9 1.1 2.5E-05 38.8 10.1 77 183-263 2-85 (243)
468 PRK10258 biotin biosynthesis p 92.9 2.6 5.6E-05 37.0 12.3 99 175-286 36-141 (251)
469 PRK13255 thiopurine S-methyltr 92.9 0.81 1.8E-05 39.3 8.8 101 177-284 33-154 (218)
470 PF02558 ApbA: Ketopantoate re 92.9 0.12 2.6E-06 41.5 3.6 95 185-286 1-102 (151)
471 PRK08278 short chain dehydroge 92.8 1.4 3E-05 39.2 10.7 82 181-264 5-100 (273)
472 TIGR02685 pter_reduc_Leis pter 92.8 1.1 2.5E-05 39.5 10.2 28 184-212 3-31 (267)
473 PRK14192 bifunctional 5,10-met 92.8 0.58 1.3E-05 41.9 8.1 82 174-287 150-233 (283)
474 PRK05565 fabG 3-ketoacyl-(acyl 92.8 0.85 1.8E-05 39.5 9.2 81 182-264 5-93 (247)
475 PF01408 GFO_IDH_MocA: Oxidore 92.8 3 6.4E-05 31.7 11.3 88 184-285 2-92 (120)
476 PLN02730 enoyl-[acyl-carrier-p 92.8 2.8 6.1E-05 38.0 12.7 30 181-210 8-40 (303)
477 TIGR02622 CDP_4_6_dhtase CDP-g 92.7 0.56 1.2E-05 43.4 8.3 36 181-217 3-39 (349)
478 TIGR02415 23BDH acetoin reduct 92.7 0.96 2.1E-05 39.5 9.4 79 184-264 2-87 (254)
479 PRK10669 putative cation:proto 92.6 1.7 3.8E-05 43.1 12.0 93 183-283 418-513 (558)
480 KOG4022 Dihydropteridine reduc 92.6 1 2.2E-05 36.2 8.2 94 183-285 4-129 (236)
481 TIGR02992 ectoine_eutC ectoine 92.6 3.4 7.3E-05 38.0 13.1 93 180-286 127-225 (326)
482 PF02254 TrkA_N: TrkA-N domain 92.5 3.6 7.8E-05 31.0 12.6 92 185-284 1-95 (116)
483 PLN02336 phosphoethanolamine N 92.5 1.9 4E-05 41.9 11.9 102 175-285 260-369 (475)
484 PRK12480 D-lactate dehydrogena 92.4 4 8.7E-05 37.5 13.3 88 181-288 145-237 (330)
485 PRK05600 thiamine biosynthesis 92.4 2 4.3E-05 40.2 11.4 35 181-215 40-74 (370)
486 COG4106 Tam Trans-aconitate me 92.3 0.9 1.9E-05 38.5 7.9 97 176-283 25-127 (257)
487 PLN02589 caffeoyl-CoA O-methyl 92.3 4 8.7E-05 35.8 12.5 103 178-283 76-188 (247)
488 PLN02490 MPBQ/MSBQ methyltrans 92.3 1.7 3.6E-05 40.1 10.5 103 174-285 105-215 (340)
489 PRK12745 3-ketoacyl-(acyl-carr 92.3 1.7 3.7E-05 37.9 10.5 80 183-264 3-90 (256)
490 PF07991 IlvN: Acetohydroxy ac 92.3 2.9 6.2E-05 33.9 10.5 87 181-284 3-94 (165)
491 PRK06940 short chain dehydroge 92.2 1.7 3.6E-05 38.8 10.4 78 183-264 3-86 (275)
492 PRK06141 ornithine cyclodeamin 92.2 5.3 0.00011 36.5 13.8 98 175-286 118-220 (314)
493 KOG1199 Short-chain alcohol de 92.2 1.4 3.1E-05 35.7 8.6 83 180-264 7-93 (260)
494 KOG1610 Corticosteroid 11-beta 92.2 4.4 9.5E-05 36.5 12.5 108 180-287 27-166 (322)
495 KOG1252 Cystathionine beta-syn 92.2 0.72 1.6E-05 41.6 7.7 57 175-231 96-155 (362)
496 PLN00203 glutamyl-tRNA reducta 92.1 1.1 2.4E-05 43.8 9.7 74 182-265 266-340 (519)
497 TIGR00452 methyltransferase, p 92.1 2.2 4.7E-05 38.9 11.0 100 175-284 115-224 (314)
498 PRK07069 short chain dehydroge 92.1 1.4 3.1E-05 38.3 9.7 78 184-264 1-89 (251)
499 PRK07411 hypothetical protein; 92.1 1.5 3.3E-05 41.3 10.3 33 182-214 38-70 (390)
500 TIGR00308 TRM1 tRNA(guanine-26 92.0 2.6 5.6E-05 39.4 11.6 92 187-285 48-147 (374)
No 1
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-60 Score=409.42 Aligned_cols=346 Identities=54% Similarity=0.920 Sum_probs=316.5
Q ss_pred hhcceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916 15 EEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (364)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
...++|+++.++..+++.+.|.|++ +|+||+|++.++|||.+|++++.....+.+..+.|.++|||.+|+|.++|+.|+
T Consensus 2 ~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 2 AADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred CcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 3568899999999999999999997 999999999999999999999998888888888999999999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHH
Q 017916 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA 173 (364)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~ 173 (364)
++|+||||...+..+|+.|.+|++++.++|+++.+.++...+|++++|+..+++++++||++++++++|++.++++++|+
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HA 161 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHA 161 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC-
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG- 252 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~- 252 (364)
.+++++++|++|||+|+|++|+.+...||++|++.|++++..+.|++++++||++.+.+....+ +..+..+......+
T Consensus 162 cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g~ 240 (354)
T KOG0024|consen 162 CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALGK 240 (354)
T ss_pred hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999876643322 22222222222233
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCC-cHHHHHHHHHcCCCCCCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN-TWPLCLELLRSGKIDVKP 331 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~~ 331 (364)
..+|+.|||+|....++.++..++.+|+++..++......++......|++++.|.+.+.. .+..+++++++|+++.++
T Consensus 241 ~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~ 320 (354)
T KOG0024|consen 241 KQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKP 320 (354)
T ss_pred cCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCchh
Confidence 5699999999998999999999999999999999888889999999999999999999955 999999999999999999
Q ss_pred ceEEEeeCChhhHHHHHHHHhcCC-CceEEEEe
Q 017916 332 LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFN 363 (364)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~ 363 (364)
++++.|++ +++.+||+....+. ..-|++++
T Consensus 321 lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 321 LITHRYKF--DDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred heeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence 99999999 99999999988774 35577765
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=5.5e-60 Score=418.89 Aligned_cols=330 Identities=31% Similarity=0.504 Sum_probs=296.8
Q ss_pred hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
.+|+|+++... +++++.+++.|+++++||+|+|+|+|+|++|++.++|.+.. ..+|++||||.+|+|+++|++|+.
T Consensus 2 ~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~~ 78 (339)
T COG1064 2 MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVTG 78 (339)
T ss_pred cceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCcc
Confidence 46888888865 45999999999999999999999999999999999987754 359999999999999999999999
Q ss_pred CCCCCEEEE-cCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHH
Q 017916 95 LVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH 172 (364)
Q Consensus 95 ~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~ 172 (364)
||+||||.+ +...+|..|.||..+++++|++..+.+. +.+|+|+||+++++.+++++|++++++.||.+ ....|+|+
T Consensus 79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~ 157 (339)
T COG1064 79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157 (339)
T ss_pred CCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEee
Confidence 999999988 8889999999999999999999776664 58999999999999999999999999999966 58889999
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+|++.+++||++|+|.|.|++|++++|+|+++|+ .|++++++++|.+++++||++++++.. .+++.+.++.
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~------ 228 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE------ 228 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh------
Confidence 9999999999999999999999999999999998 789999999999999999999998743 3454444432
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV 329 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~ 329 (364)
.+|++||+++ +..++..++.|+++|+++.+|... .+ ..++...++.+++++.|+... +.++++++++..+|++
T Consensus 229 -~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~I-- 304 (339)
T COG1064 229 -IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKI-- 304 (339)
T ss_pred -hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCc--
Confidence 3999999999 999999999999999999999774 43 346677789999999999887 7889999999999999
Q ss_pred CCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+|.+.+.+++ +++++||+.|++++..|++|+++
T Consensus 305 kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 305 KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence 6766578899 99999999999999999999874
No 3
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-52 Score=387.48 Aligned_cols=337 Identities=31% Similarity=0.552 Sum_probs=290.5
Q ss_pred hcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 16 EVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
..++++++.++..+++.+.+.| ++++||+|||.++|+|++|++.+.+...+.+...+|.++|||++|+|+++ ++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~ 79 (343)
T PRK09880 3 VKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL 79 (343)
T ss_pred ccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence 3467888999999999999997 68999999999999999999987533222223467999999999999999 78899
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL 171 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~ 171 (364)
++||+|+..+..+|..|++|..+++++|++..+++. ...+|+|+||+++++++++++|+++++++++++.++++||
T Consensus 80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~ 159 (343)
T PRK09880 80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAI 159 (343)
T ss_pred CCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHHH
Confidence 999999999999999999999999999998776543 1247999999999999999999999988877777889999
Q ss_pred HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+++++....+|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|++.++++++ +++.+ +...
T Consensus 160 ~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~~- 232 (343)
T PRK09880 160 HAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKAE- 232 (343)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhcc-
Confidence 9998777778999999999999999999999999987888989999999999999999887643 33332 2221
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCC
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP 331 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 331 (364)
.+++|++|||+|++..+..++++|+++|+++.+|.......++...+..+++++.+.....+.++++++++++|++.+.+
T Consensus 233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~ 312 (343)
T PRK09880 233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLP 312 (343)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchh
Confidence 23699999999987888999999999999999997555455666677889999999887778899999999999997777
Q ss_pred ceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 332 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.++++|+| +++++|++.++++...||+++++
T Consensus 313 ~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 313 LLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred heEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 88999999 99999999999888889999874
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-51 Score=351.14 Aligned_cols=338 Identities=27% Similarity=0.406 Sum_probs=287.0
Q ss_pred ccchhcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916 12 EDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (364)
Q Consensus 12 ~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 88 (364)
+..++.+++..+.. +.++++.+++.|+++++||+|+|+|+|+|.+|++.+.|.|.. ..+|.++|||.+|+|+++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEEE
Confidence 44556677777763 458888999999999999999999999999999999986632 688999999999999999
Q ss_pred CCCCCCCCCCCEEEE-cCCcCCCCCccccCCCCCCCCCcccccc-CCC-----CCcceeEEEecCCceEECCCCCCccch
Q 017916 89 GSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFAT-PPV-----HGSLANQVVHPADLCFKLPDNVSLEEG 161 (364)
Q Consensus 89 G~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~g~~~~~v~~~~~~~~~lP~~~~~~~a 161 (364)
|++|+.|++||+|-+ .-...|..|.+|..+.+++|+++.+... ... +|+|++|+++++.+++++|++++.+.|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 999999999999944 6678899999999999999996555433 233 455999999999999999999999999
Q ss_pred hhh-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCccc
Q 017916 162 AMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQD 239 (364)
Q Consensus 162 a~~-~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~ 239 (364)
|.+ ....|.|..|...++.||++|-|.|+|++|.+++|+||++|. +|+++++++ +|.+.++.||++..++..+ +++
T Consensus 161 APlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~d 238 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DPD 238 (360)
T ss_pred cchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CHH
Confidence 944 577799999999999999999999996699999999999999 678887776 7778889999999887432 234
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHH
Q 017916 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLC 318 (364)
Q Consensus 240 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (364)
.++++.++....+|-+.+. +...+..++.+|+++|+++++|++.....++..++..+.+.+.|+... +.+.+++
T Consensus 239 ---~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~ 313 (360)
T KOG0023|consen 239 ---IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEA 313 (360)
T ss_pred ---HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHH
Confidence 4555554445566666654 467888999999999999999998888889999999999999999876 8899999
Q ss_pred HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++..++.+ ++.+ +..++ +++++||++|+++..++|.|+++
T Consensus 314 Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 314 LDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred HHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence 999999998 4444 66678 99999999999999999999874
No 5
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.9e-50 Score=372.24 Aligned_cols=336 Identities=34% Similarity=0.566 Sum_probs=287.9
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|+++++.+++.+++++.+.|+++++||+|||.++++|++|+..+.+.+.. ....|.++|||++|+|+++|++++.|++
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (339)
T cd08239 1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV 78 (339)
T ss_pred CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence 57888888899999999999999999999999999999999988764322 1235899999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR 176 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~ 176 (364)
||+|++.+..+|..|++|+.+++++|.+.........+|+|+||+.+++++++++|+++++++|+.+. ++.+||++++.
T Consensus 79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~ 158 (339)
T cd08239 79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRR 158 (339)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence 99999999999999999999999999887542223457999999999999999999999999988775 88899999988
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
+.+++|++|||+|+|++|++++|+|+.+|++.|++++++++|.++++++|++.+++++. ++ .+.+.++. .+.++|
T Consensus 159 ~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~~d 233 (339)
T cd08239 159 VGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAGAD 233 (339)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCCCC
Confidence 88999999999998999999999999999975888888999999999999998887643 23 44454443 245899
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc-chhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceE
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP-LTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVT 334 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~ 334 (364)
++|||+|+...+..++++|+++|+++.+|..... .+. ...+..+++++.+.+.. .+.++++++++.+|++.+.+.++
T Consensus 234 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~ 312 (339)
T cd08239 234 VAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVT 312 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEE
Confidence 9999999877778899999999999999864332 222 23467789999998775 46899999999999997777889
Q ss_pred EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 335 HRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 335 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++|+| +++++|++.++++. .||+|+++
T Consensus 313 ~~~~l--~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 313 HRFGL--DQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence 99999 99999999998875 79999975
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=4.5e-50 Score=347.84 Aligned_cols=334 Identities=29% Similarity=0.482 Sum_probs=285.2
Q ss_pred ceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
+++++.. ..++|+++++++++|+++||+||+.++|+|++|...+.|.++. .+|.++|||++|+|++||++|+++|
T Consensus 3 ~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~----~~P~vLGHEgAGiVe~VG~gVt~vk 78 (366)
T COG1062 3 TRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE----GFPAVLGHEGAGIVEAVGEGVTSVK 78 (366)
T ss_pred ceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC----CCceecccccccEEEEecCCccccC
Confidence 4566655 4589999999999999999999999999999999999986643 4899999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc-------cc-----------CCCCC--cceeEEEecCCceEECCCCC
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF-------AT-----------PPVHG--SLANQVVHPADLCFKLPDNV 156 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----------~~~~g--~~~~~v~~~~~~~~~lP~~~ 156 (364)
|||+|+......|..|++|..+++++|...--. +. ...-| +|+||.++++..+++++++.
T Consensus 79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 999999998899999999999999999632111 00 01223 89999999999999999999
Q ss_pred Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916 157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (364)
Q Consensus 157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~ 234 (364)
+++.++++- ...|.+-++ +.+++++|++|.|.|.|++|++++|-|+..|++.+++++..++|++++++||++++++-.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 999999885 677788765 789999999999999999999999999999999999999999999999999999988732
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchh--hhhcCcEEEeeccC-
Q 017916 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRY- 311 (364)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~- 311 (364)
+. .+..+.+.+++ +.++|++|||+|+.+.++++++++.++|+.+..|.......++.+. +... .+++|+...
T Consensus 239 ~~-~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~ 313 (366)
T COG1062 239 EV-DDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGG 313 (366)
T ss_pred hh-hhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecC
Confidence 21 14666665554 5699999999999999999999999999999999765544444444 3434 777887654
Q ss_pred ---CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 312 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 312 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+.++.++++++.+|++++.+++++.++| ||+++||++|.+++.. |-|+.
T Consensus 314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred CccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEec
Confidence 7789999999999999999999999999 9999999999999665 55544
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.7e-49 Score=368.07 Aligned_cols=334 Identities=33% Similarity=0.502 Sum_probs=284.7
Q ss_pred ceeEEEec---------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916 18 NMAAWLLG---------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (364)
Q Consensus 18 ~~~~~~~~---------~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 88 (364)
|+|+++.. ++.+++.+.|.|+++++||+|||.++++|++|+..+.|.+. ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEe
Confidence 45666652 47899999999999999999999999999999999887532 356899999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCc
Q 017916 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADL 148 (364)
Q Consensus 89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~v~~~~~~ 148 (364)
|++++++++||+|++.+..+|..|..|+.+++++|.+...... ....|+|+||+.+++++
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 9999999999999998878899999999999999987532210 00137999999999999
Q ss_pred eEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC
Q 017916 149 CFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 226 (364)
Q Consensus 149 ~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg 226 (364)
++++|+++++++|+++. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G 236 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG 236 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence 99999999999988775 778999987 5688999999999999999999999999999977888889999999999999
Q ss_pred CCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcE
Q 017916 227 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVD 304 (364)
Q Consensus 227 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~ 304 (364)
+++++++. .+++.+.++++. ++++|++|||+|.+..+..++++++++|+++.+|.... ...++...+..++++
T Consensus 237 a~~~i~~~--~~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 311 (371)
T cd08281 237 ATATVNAG--DPNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERT 311 (371)
T ss_pred CceEeCCC--chhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCE
Confidence 99887753 356666666653 34899999999988899999999999999999986432 234555567889999
Q ss_pred EEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 305 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 305 ~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
+.+.+.. .+.+.++++++++|++++.+.+++.|+| +++++||+.++++...+|+++
T Consensus 312 i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 312 LKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred EEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence 9998754 4678899999999999777788999999 999999999999988888764
No 8
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.4e-49 Score=368.66 Aligned_cols=347 Identities=26% Similarity=0.425 Sum_probs=288.7
Q ss_pred ccccchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916 10 EKEDGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (364)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 88 (364)
+++..+.+|+++++.++. .+++.+.+.|+++++||+|||+++|+|++|++.+.|.+.. ...+|.++|||++|+|+++
T Consensus 3 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~v 80 (381)
T PLN02740 3 ETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESV 80 (381)
T ss_pred cccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEe
Confidence 344455679999998775 5899999999999999999999999999999998875421 2357899999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-----------------------CCCCCcceeEEEec
Q 017916 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------PPVHGSLANQVVHP 145 (364)
Q Consensus 89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~v~~~ 145 (364)
|+++++|++||+|++.+..+|..|.+|..+..++|.+...... ....|+|+||++++
T Consensus 81 G~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~ 160 (381)
T PLN02740 81 GEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLD 160 (381)
T ss_pred CCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEe
Confidence 9999999999999999999999999999999999998653210 00259999999999
Q ss_pred CCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH
Q 017916 146 ADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK 223 (364)
Q Consensus 146 ~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~ 223 (364)
.++++++|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++
T Consensus 161 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~ 240 (381)
T PLN02740 161 SACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGK 240 (381)
T ss_pred hHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH
Confidence 99999999999998888765 788999887 5688999999999999999999999999999976888889999999999
Q ss_pred HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchhh-hhc
Q 017916 224 ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPA-AVR 301 (364)
Q Consensus 224 ~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~ 301 (364)
++|++.++++....+++.+.++++. ++++|++||++|.++.+..++.+++++ |+++.+|.......+..... ..+
T Consensus 241 ~~Ga~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~ 317 (381)
T PLN02740 241 EMGITDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFD 317 (381)
T ss_pred HcCCcEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhc
Confidence 9999988876543345666676654 338999999999888999999999997 99999986543222222222 346
Q ss_pred CcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 302 EVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 302 ~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++++.|.... ...+.++++++.++.+++.+.++++|+| +++++|++.++++.. .|++|++
T Consensus 318 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 318 GRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred CCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence 7888876543 3468899999999999777788999999 999999999988854 5999874
No 9
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.7e-49 Score=366.33 Aligned_cols=344 Identities=23% Similarity=0.395 Sum_probs=286.8
Q ss_pred cccccchhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE
Q 017916 9 GEKEDGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87 (364)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~ 87 (364)
+.+++....|+++++.++ +.+++++.|.|+++++||+|||.++|+|++|+..+.+. ..+|.++|||++|+|++
T Consensus 4 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~ 77 (378)
T PLN02827 4 SISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVES 77 (378)
T ss_pred cccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEE
Confidence 334445567889988875 57999999999999999999999999999999987653 14688999999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCC
Q 017916 88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPAD 147 (364)
Q Consensus 88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~v~~~~~ 147 (364)
+|+++++|++||+|++.+...|..|.+|+.+++++|.+...... ....|+|+||+.++++
T Consensus 78 vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~ 157 (378)
T PLN02827 78 IGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
T ss_pred cCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechh
Confidence 99999999999999999888999999999999999987532110 0124899999999999
Q ss_pred ceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc
Q 017916 148 LCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL 225 (364)
Q Consensus 148 ~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l 225 (364)
.++++|+++++++++.+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++
T Consensus 158 ~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~l 237 (378)
T PLN02827 158 CAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTF 237 (378)
T ss_pred heEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 999999999998888665 667788776 558899999999999999999999999999997788888899999999999
Q ss_pred CCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccc-hhhhhcCc
Q 017916 226 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPL-TPAAVREV 303 (364)
Q Consensus 226 g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~ 303 (364)
|++.++++.+..+++.+.++++. ++++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++
T Consensus 238 Ga~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~ 314 (378)
T PLN02827 238 GVTDFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGR 314 (378)
T ss_pred CCcEEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCc
Confidence 99988876543345666666654 348999999999877889999999998 99999997543333333 34677899
Q ss_pred EEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 304 DVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 304 ~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++.|.... ...+.++++++++|++++.+.++++|+| +++.+|++.+++++. +|+||.+
T Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 315 TLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred eEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence 99987653 3478899999999999665588999999 999999999998866 6999864
No 10
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=7.3e-49 Score=356.67 Aligned_cols=310 Identities=33% Similarity=0.441 Sum_probs=260.5
Q ss_pred ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++. +++.+++.+.|.|.+++|||+|||+++++||.|+..++|. .....++|+++|.|++|+|+++|++|+.
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~~ 78 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVTG 78 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence 4566655 4556999999999999999999999999999999999985 2223568999999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
|++||+|+... .. ...|+|+||+.+++++++++|+++++++||+++ .+.|||++
T Consensus 79 ~~~GdrV~~~~-~~------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~ 133 (326)
T COG0604 79 FKVGDRVAALG-GV------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA 133 (326)
T ss_pred cCCCCEEEEcc-CC------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999752 00 046999999999999999999999999999886 89999999
Q ss_pred HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+. ..++++|++|||+|+ |++|.+++||||++|+ .++++.+++++.++++++|++++++|.+ ++|.+.+++++.
T Consensus 134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t~-- 208 (326)
T COG0604 134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELTG-- 208 (326)
T ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHcC--
Confidence 95 488999999999987 9999999999999998 4555557777777999999999999754 569999988763
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELL 322 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l 322 (364)
+.++|+|||++| .+.+..++++|+++|+++.+|... .....+...+..+.+...+.... .+.++++.+++
T Consensus 209 g~gvDvv~D~vG-~~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~ 287 (326)
T COG0604 209 GKGVDVVLDTVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLL 287 (326)
T ss_pred CCCceEEEECCC-HHHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHH
Confidence 568999999999 788899999999999999999654 33345566677788888887665 24677899999
Q ss_pred HcCCCCCCCceEEEeeCChhhHHHHHHHHhc-CCCceEEEEeC
Q 017916 323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMFNL 364 (364)
Q Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv~~ 364 (364)
++|++ ++.+.++|+| ++..++..+... ++..||+|+++
T Consensus 288 ~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 288 ASGKL--KPVIDRVYPL--AEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HcCCC--cceeccEech--hhhHHHHHHHHcccCCcceEEEeC
Confidence 99999 8888899999 885555444333 58999999975
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=8e-48 Score=358.22 Aligned_cols=336 Identities=28% Similarity=0.478 Sum_probs=283.3
Q ss_pred cceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
+|+++++..+. ++++++.|.|+++++||+|||.++++|++|+..+.|... ..+|.++|||++|+|+++|+++++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~ 76 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV 76 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence 47888888664 589999999999999999999999999999998877432 3578999999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------cc----CCCCCcceeEEEecCCceEECCCCCCccchhh
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM 163 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~ 163 (364)
++||+|++.+...|..|.+|+.++.++|.+.... +. ....|+|+||+.+++++++++|+++++++|++
T Consensus 77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~ 156 (358)
T TIGR03451 77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL 156 (358)
T ss_pred CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence 9999999999999999999999999999753211 00 01259999999999999999999999988887
Q ss_pred hh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916 164 CE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241 (364)
Q Consensus 164 ~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 241 (364)
+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|++.++++.. +++.
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~ 234 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDPV 234 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCHH
Confidence 75 677888776 5688999999999998999999999999999977889989999999999999988887543 5666
Q ss_pred HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC--ccccchhhhhcCcEEEeeccC----CCcH
Q 017916 242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY----KNTW 315 (364)
Q Consensus 242 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~ 315 (364)
+.+++.. .+.++|++|||+|++..+..++++++++|+++.+|..... ..++...+..+++++.+.+.. .+.+
T Consensus 235 ~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 312 (358)
T TIGR03451 235 EAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF 312 (358)
T ss_pred HHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence 6666553 2457999999999878899999999999999999965332 334444567788888887532 4678
Q ss_pred HHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 316 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 316 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+++++++++|++++.+.++++|++ +++++|++.+++++.. |+++.
T Consensus 313 ~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 313 PMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEe
Confidence 899999999999777788999999 9999999999888665 77765
No 12
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=3.3e-47 Score=355.06 Aligned_cols=363 Identities=88% Similarity=1.410 Sum_probs=308.2
Q ss_pred CCCCCCCccccccchhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccc
Q 017916 1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80 (364)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e 80 (364)
||+++|++.+-.--.+.++++|+.+++.+++.+.+.|.+.++||+|||.++++|+.|+....+...+.+....|.++|+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e 80 (364)
T PLN02702 1 MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE 80 (364)
T ss_pred CCCCccccCCCcccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc
Confidence 99999999987767777888999999999999999998999999999999999999999887633222223457899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (364)
Q Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~ 160 (364)
++|+|+++|+++++|++||+|++.+..+|++|..|..+..++|.+..+++....+|+|++|+.++.++++++|+++++++
T Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~ 160 (364)
T PLN02702 81 CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE 160 (364)
T ss_pred eeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999998865554334579999999999999999999999998
Q ss_pred hhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccH
Q 017916 161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240 (364)
Q Consensus 161 aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~ 240 (364)
+++..++++++++++..++.+|++|||+|+|++|++++|+|+++|++.+++++.++++.++++++|++..++++....++
T Consensus 161 aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (364)
T PLN02702 161 GAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV 240 (364)
T ss_pred HhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccH
Confidence 88655666788888778899999999998899999999999999998788888889999999999999887765444567
Q ss_pred HHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHH
Q 017916 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLE 320 (364)
Q Consensus 241 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
.+.++.+....+.++|++||++|++..+...+++|+++|+++.+|...............+++++.+.+.....++.+++
T Consensus 241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 320 (364)
T PLN02702 241 ESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLE 320 (364)
T ss_pred HHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHH
Confidence 77776654334568999999999778899999999999999999854333334555677888999988776678899999
Q ss_pred HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+++++.+.+.+.+.+.|+++.+++++|++.+.++...+|+++.
T Consensus 321 ~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 321 FLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 9999998655567788777668999999999988888999985
No 13
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.3e-47 Score=356.01 Aligned_cols=337 Identities=27% Similarity=0.413 Sum_probs=277.1
Q ss_pred ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++.+.. .+.++++++|.|+++++||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+|+++|++++.|+
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence 56666654 467999999999999999999999999999999988875421 35789999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCceEECCCCC
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDNV 156 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~v~~~~~~~~~lP~~~ 156 (364)
+||+|++.+..+|..|.+|+.++.++|.+.... +. ....|+|+||+.+++++++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 999999998889999999999999999875311 00 0024799999999999999999999
Q ss_pred Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916 157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (364)
Q Consensus 157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~ 234 (364)
++++++.+. ++.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|++.++++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~ 238 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN 238 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence 999988776 888999998 568899999999999999999999999999997788888999999999999999888765
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC--CccccchhhhhcCcEEEeeccC
Q 017916 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRY 311 (364)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 311 (364)
+..+++.+.++++. ++++|++|||+|++..+..++++++++ |+++.+|.... ........+. +...+.+....
T Consensus 239 ~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 314 (368)
T TIGR02818 239 DYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFG 314 (368)
T ss_pred ccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeecc
Confidence 43345556666554 248999999999888889999999886 99999986432 2222222233 23345555432
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 312 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 312 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
...+.+++++++++++++.+.+++.|+| +++++|++.++++. ..|+++++
T Consensus 315 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~-~~k~~v~~ 368 (368)
T TIGR02818 315 GVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGK-SIRTVIHY 368 (368)
T ss_pred CCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence 4568999999999999777889999999 99999999998875 46999874
No 14
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-47 Score=353.07 Aligned_cols=335 Identities=30% Similarity=0.523 Sum_probs=283.2
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.++..+++.+.|.|++ +++||+|||.++++|++|+..+.... . ..+|.++|+|++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~---~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-A---HYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-C---CCCCcccccceEEEEEEeCCCCCCCC
Confidence 4688888888899999999997 58999999999999999987543211 0 23588999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~ 176 (364)
+||+|++.+..+|+.|++|..++.++|.+....+. ...|+|+||+.+++++++++|+++++++|+++.++++++++++.
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~ 155 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL 155 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence 99999999999999999999999999988765543 45799999999999999999999999998877667778888877
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
..+++|++|||+|+|++|++++|+|+++|++.+++++.++++.++++++|++.+++++. .+ .+.+.++. .+.++|
T Consensus 156 ~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~--~~~~~d 230 (347)
T PRK10309 156 AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL--RELRFD 230 (347)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh--cCCCCC
Confidence 88899999999988999999999999999977888888999999999999988877543 23 33444443 245788
Q ss_pred -EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc---chhhhhcCcEEEeeccC------CCcHHHHHHHHHcCC
Q 017916 257 -VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP---LTPAAVREVDVVGVFRY------KNTWPLCLELLRSGK 326 (364)
Q Consensus 257 -~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~ 326 (364)
++|||+|....+..++++|+++|+++.+|.......++ ...+..+++++.+.+.. .+.++++++++++|.
T Consensus 231 ~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~ 310 (347)
T PRK10309 231 QLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERK 310 (347)
T ss_pred eEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCC
Confidence 99999998889999999999999999998654332222 23466788999987643 357889999999999
Q ss_pred CCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.+.+.+++.|+| +++++|++.++++...||+++++
T Consensus 311 i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 311 LSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred CCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 9777889999999 99999999999998899999875
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.4e-47 Score=351.32 Aligned_cols=337 Identities=36% Similarity=0.590 Sum_probs=277.0
Q ss_pred ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCc-ccccceeEEEEEeCCCCCCC
Q 017916 18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM-VIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~ 95 (364)
|++++...+. ..++.+.+.|.++|++|+|||+++|||.+|++.+.+.... ...|. ++|||++|+|+++| .++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence 4566666544 4447777777679999999999999999999999875322 23344 99999999999999 77889
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCceEEC-CCCCCccchhhhhhhHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKL-PDNVSLEEGAMCEPLSVG 170 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~~l-P~~~~~~~aa~~~~~~~a 170 (364)
++||||++.+..+|.+|++|+.+.+++|.+..+++.. ..+|+|+||+.+|.++.+++ |++++.+.|++..+++++
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~ 156 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA 156 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence 9999999999999999999999999999977655432 26799999999997666665 777777778888899999
Q ss_pred HHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHH
Q 017916 171 LHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 171 ~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
+++. .....+++++|+|+|+|++|++++++|+.+|++.|++++.+++|++++++ .+++.+.+. . .++....+.+++
T Consensus 157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~-~-~~~~~~~~~~~t 234 (350)
T COG1063 157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP-S-EDDAGAEILELT 234 (350)
T ss_pred hhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC-c-cccHHHHHHHHh
Confidence 8884 45555666699999999999999999999999999999999999999999 556554432 2 124444444443
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeecc-C-CCcHHHHHHHHHcC
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFR-Y-KNTWPLCLELLRSG 325 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~g 325 (364)
.+.++|++|||+|+...+.+++++++++|+++.+|...... .++...+..|++++.|... . ...++.+++++.+|
T Consensus 235 --~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g 312 (350)
T COG1063 235 --GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASG 312 (350)
T ss_pred --CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcC
Confidence 35689999999999999999999999999999999876655 5667778899999999965 3 56899999999999
Q ss_pred CCCCCCceEEEeeCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017916 326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL 364 (364)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 364 (364)
++.+.+.+++.+++ +++++||+.+.+... ..|+++++
T Consensus 313 ~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 313 KIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence 99988888898888 999999999987543 67988864
No 16
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=6e-47 Score=353.87 Aligned_cols=338 Identities=25% Similarity=0.439 Sum_probs=280.8
Q ss_pred cceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 17 ~~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
+++++++.. ++.+++++.+.|+++++||+|||.++++|++|+..+.|.+. ...+|.++|||++|+|+++|+++++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence 577888774 46799999999999999999999999999999998887542 24578999999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc---------------------CCCCCcceeEEEecCCceEECCC
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFKLPD 154 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~v~~~~~~~~~lP~ 154 (364)
++||+|++.+...|..|.+|+.++.++|.+...... ....|+|+||+.+++++++++|+
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 999999999889999999999999999988643200 01348999999999999999999
Q ss_pred CCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916 155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232 (364)
Q Consensus 155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~ 232 (364)
++++++|+++. .+.++|+++ +..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999888775 678899887 5588999999999999999999999999999977888889999999999999988887
Q ss_pred cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchh-hhhcCcEEEeecc
Q 017916 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFR 310 (364)
Q Consensus 233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 310 (364)
+.....++.+.++++. ++++|++|||+|....+..++++++++ |+++.+|.......+.... .+.+++++.+...
T Consensus 239 ~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 315 (369)
T cd08301 239 PKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLF 315 (369)
T ss_pred ccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEec
Confidence 5443235666666554 348999999999888889999999996 9999999654322222222 2346888888754
Q ss_pred C----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 311 Y----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 311 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
. +..++++++++.++.+++.+.++++|+| +++++|++.+++++. .|+++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~~ 369 (369)
T cd08301 316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCILH 369 (369)
T ss_pred CCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEeC
Confidence 3 3468899999999998777778899999 999999999998875 488873
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.8e-47 Score=356.74 Aligned_cols=336 Identities=23% Similarity=0.438 Sum_probs=269.1
Q ss_pred ceeEEEecCCceEEEEecCCCCC-------CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS 90 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~-------~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 90 (364)
|+++++.++..++++++|.|+++ ++||||||+++|||++|++.+.|.+ ...+|.++|||++|+|+++|+
T Consensus 3 mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~ 78 (393)
T TIGR02819 3 NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEVIEKGR 78 (393)
T ss_pred ceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEEEEEcC
Confidence 67888888889999999999874 6899999999999999999887643 235689999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccc------ccc---CCCCCcceeEEEecCC--ceEECCCCCCc-
Q 017916 91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------FAT---PPVHGSLANQVVHPAD--LCFKLPDNVSL- 158 (364)
Q Consensus 91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~g~~~~~v~~~~~--~~~~lP~~~~~- 158 (364)
+|++|++||||.+.+...|..|.+|..++.++|.+... ++. ...+|+|+||+.+++. +++++|++++.
T Consensus 79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~ 158 (393)
T TIGR02819 79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL 158 (393)
T ss_pred ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence 99999999999998888999999999999999997531 121 1246999999999964 79999998653
Q ss_pred ---cchh-hhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916 159 ---EEGA-MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (364)
Q Consensus 159 ---~~aa-~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~ 234 (364)
..++ +..++.++|++++..++++|++|||.|+|++|++++|+|+.+|++++++++.+++|.++++++|++. +++.
T Consensus 159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~ 237 (393)
T TIGR02819 159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLS 237 (393)
T ss_pred ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecC
Confidence 2233 4458889999998888999999999888999999999999999987777778889999999999974 4432
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEECCCCH--------------HHHHHHHHhcccCCEEEEEcCCC-CCc--------
Q 017916 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN--------------KTMSTALSATRAGGKVCLVGMGH-HEM-------- 291 (364)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~-------- 291 (364)
...++.+.++++. .+.++|++|||+|.+ ..++++++.++++|+++.+|... ...
T Consensus 238 -~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~ 314 (393)
T TIGR02819 238 -KDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAK 314 (393)
T ss_pred -CcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccc
Confidence 2235666666543 245799999999975 47899999999999999999742 111
Q ss_pred ----cccchhhhhcCcEEEeeccCC-CcHHHHHHHHHcCCCCCCCceE-EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 292 ----TVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 292 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.+.....+.+++++.+..... +.+.++++++++|++++.++++ ++|+| +++++||+.+.++. .+|+++++
T Consensus 315 ~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~Kvvi~~ 390 (393)
T TIGR02819 315 TGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKKFVIDP 390 (393)
T ss_pred ccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceEEEEeC
Confidence 111223445566666643322 3347899999999997766676 78999 99999999998874 58999864
No 18
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.8e-47 Score=351.97 Aligned_cols=337 Identities=22% Similarity=0.347 Sum_probs=270.5
Q ss_pred cccccchhcceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE
Q 017916 9 GEKEDGEEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87 (364)
Q Consensus 9 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~ 87 (364)
++.+++++. .++... ..+.+++.+.+.|.++++||+|||.++++|++|++.+.|.+. ...+|.++|||++|+|++
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 5 PEEEHPQKA-FGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred hhhhchhhe-eEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEE
Confidence 333433333 344444 457889999999999999999999999999999998876432 135689999999999999
Q ss_pred eCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916 88 VGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (364)
Q Consensus 88 vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~ 160 (364)
+|+++++|++||+|+..+. ..|..|.+|..+++++|++..+.. ....+|+|+||+.+++++++++|+++++++
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~ 160 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDA 160 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHH
Confidence 9999999999999986543 579999999999999999865431 123479999999999999999999999999
Q ss_pred hhhhh-hhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCc
Q 017916 161 GAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNL 237 (364)
Q Consensus 161 aa~~~-~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~ 237 (364)
|+.+. .+.++|+++.. ..+++|++|||.|+|++|++++|+|+.+|++ +++++.++ ++.++++++|++.++++..
T Consensus 161 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~-- 237 (360)
T PLN02586 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTD-- 237 (360)
T ss_pred hhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCC--
Confidence 88665 67789998854 5578999999999999999999999999995 55555554 4456778999988876432
Q ss_pred ccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHH
Q 017916 238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWP 316 (364)
Q Consensus 238 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 316 (364)
. +.+++.. + ++|++||++|+...+..++++++++|+++.+|.......++...++.++..+.+.... ...++
T Consensus 238 ~---~~~~~~~---~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 310 (360)
T PLN02586 238 P---EKMKAAI---G-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQ 310 (360)
T ss_pred H---HHHHhhc---C-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHH
Confidence 1 2333332 3 6999999999877889999999999999999865444455566667788888777654 45789
Q ss_pred HHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 317 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++++++++|++ ++.+ ++|+| +++++||+.++++...||+|+++
T Consensus 311 ~~~~li~~g~i--~~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 311 EMLDFCAKHNI--TADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHHHHhCCC--CCcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence 99999999999 4444 57999 99999999999998889999874
No 19
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.2e-46 Score=351.43 Aligned_cols=337 Identities=26% Similarity=0.427 Sum_probs=276.8
Q ss_pred cceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 17 ~~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
+++++++.. ++.+++++.|.|+++++||+|||+++++|++|+..+.|.+.. ..+|.++|||++|+|+++|+++++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence 467777664 468999999999999999999999999999999988875421 3578999999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCceEECCCC
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDN 155 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~v~~~~~~~~~lP~~ 155 (364)
++||+|++.+..+|..|++|+.++.++|.+.... +. ....|+|+||+.+++++++++|++
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 158 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE 158 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence 9999999998899999999999999999875321 00 002479999999999999999999
Q ss_pred CCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916 156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (364)
Q Consensus 156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~ 233 (364)
+++++|+.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|+++++++
T Consensus 159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~ 238 (368)
T cd08300 159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP 238 (368)
T ss_pred CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence 9999988776 788999987 56889999999999889999999999999999778888899999999999999998876
Q ss_pred CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC--CccccchhhhhcCcEEEeecc
Q 017916 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR 310 (364)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ 310 (364)
.+.++++.+.++++. ++++|++|||+|+...+..++++++++ |+++.+|.... ........+. +...+.+...
T Consensus 239 ~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (368)
T cd08300 239 KDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAF 314 (368)
T ss_pred cccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEe
Confidence 543335777776654 348999999999878889999999886 99999986432 1222222222 2334444432
Q ss_pred ----CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 311 ----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 311 ----~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
....+.++++++.++++.+.+.++++|+| +++++||+.++++.. .|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence 25678899999999999766788999999 999999999988754 688874
No 20
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.2e-46 Score=346.88 Aligned_cols=340 Identities=36% Similarity=0.628 Sum_probs=290.3
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhccc-CC-------ccCCCCcccccceeEEEEEeC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-AD-------FVVKEPMVIGHECAGVIEKVG 89 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~-~~-------~~~~~p~~~G~e~~G~V~~vG 89 (364)
|+++++.+++.+++.+.+.|++.++||+||+.++++|+.|+..+.+... .. .....|.++|+|++|+|+++|
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 80 (351)
T cd08233 1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80 (351)
T ss_pred CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence 5678888888899999999999999999999999999999886653211 00 012368999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHH
Q 017916 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 169 (364)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ 169 (364)
+++++|++||+|++.+...|..|.+|+.++..+|.+..+.+....+|+|++|+.++.++++++|+++++++++++.++.+
T Consensus 81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t 160 (351)
T cd08233 81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV 160 (351)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence 99999999999999988899999999999999999876544333479999999999999999999999998887777889
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 170 a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
||++++.+++++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++.. .++.+.++++.
T Consensus 161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~- 237 (351)
T cd08233 161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT- 237 (351)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence 999997788999999999988999999999999999977888888999999999999998887543 56777776654
Q ss_pred HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 328 (364)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 328 (364)
.++++|++||++|++..+..++++|+++|+++.+|.......++...+..+++++.+.... .+.+++++++++++++.
T Consensus 238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~ 316 (351)
T cd08233 238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKID 316 (351)
T ss_pred -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCC
Confidence 2456999999999778889999999999999999865444455666677899999988765 68899999999999997
Q ss_pred CCCceEEEeeCChhhH-HHHHHHHhcCCC-ceEEEEe
Q 017916 329 VKPLVTHRFGFSQKEV-EEAFETSARGGT-AIKVMFN 363 (364)
Q Consensus 329 ~~~~~~~~~~~~~~~~-~~a~~~~~~~~~-~gkvvv~ 363 (364)
+.+.+.++|++ +++ ++|++.++++.. .||+||.
T Consensus 317 ~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 317 AEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred hHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence 66778889999 996 799999998876 4999974
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=5.5e-46 Score=344.68 Aligned_cols=332 Identities=24% Similarity=0.446 Sum_probs=277.2
Q ss_pred EecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017916 23 LLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101 (364)
Q Consensus 23 ~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 101 (364)
+.++. .+++++.|.|.++++||+|||.++++|++|++.+.+.+.. ...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 4 ~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 4 MTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred EecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 44443 4888999999999999999999999999999876443211 13568999999999999999999887 99999
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC------CCCccchhhh-hhhHHHHHHH
Q 017916 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------NVSLEEGAMC-EPLSVGLHAC 174 (364)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~------~~~~~~aa~~-~~~~~a~~~l 174 (364)
++.+..+|..|.+|..++.++|.+....+. ..+|+|+||+.+++++++++|+ +++++.++.+ ..+.++|+++
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~ 159 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA 159 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHH
Confidence 999999999999999999999988766543 3579999999999999999999 8888877765 4888999999
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHcCC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGT 253 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 253 (364)
+..++++|++|||+|+|++|++++|+|+.+|+ .+++++.+++|.++++++|++.++++.... +++.+.+++++. +.
T Consensus 160 ~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~--~~ 236 (349)
T TIGR03201 160 VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAK--AR 236 (349)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcc--cC
Confidence 88889999999999999999999999999999 578888899999999999998887754321 245555555532 45
Q ss_pred Ccc----EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916 254 GID----VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 328 (364)
Q Consensus 254 ~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 328 (364)
++| ++|||+|+...++.++++|+++|+++.+|.......++...++.++.++.+.+.. ...++++++++++|++.
T Consensus 237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~ 316 (349)
T TIGR03201 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQ 316 (349)
T ss_pred CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence 676 8999999888888999999999999999965444445555666778888887754 56799999999999997
Q ss_pred CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.+.+ +.|+| +++++||+.++++...||+++++
T Consensus 317 ~~~~i-~~~~l--~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 317 LGPFV-ERRPL--DQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cccce-EEecH--HHHHHHHHHHHcCCccceEEecC
Confidence 65555 47888 99999999999998899999864
No 22
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=9.7e-46 Score=344.98 Aligned_cols=335 Identities=27% Similarity=0.470 Sum_probs=279.6
Q ss_pred ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
++++++.+ .+.+++.+.|.|.++++||+|||+++++|++|++.+.|.+. ..+|.++|+|++|+|+++|+++++++
T Consensus 3 ~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 3 CKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred cEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccCC
Confidence 56777764 35689999999999999999999999999999998877542 35689999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-------------------CCCCCcceeEEEecCCceEECCCCCC
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVHGSLANQVVHPADLCFKLPDNVS 157 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~v~~~~~~~~~lP~~~~ 157 (364)
+||+|++.+...|..|.+|..++.++|++...... ....|+|+||+.+++++++++|++++
T Consensus 79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 99999998889999999999999999987543210 01258999999999999999999999
Q ss_pred ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916 158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235 (364)
Q Consensus 158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~ 235 (364)
+++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++++++..+
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~ 238 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD 238 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence 99988776 788999987 5688999999999988999999999999999977888889999999999999988877544
Q ss_pred CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC-CccccchhhhhcCcEEEeeccC--
Q 017916 236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-- 311 (364)
Q Consensus 236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 311 (364)
...++.+.+++.. +.++|++|||+|+...+..++++++++ |+++.+|.... ...++...+.. ++++.+.+..
T Consensus 239 ~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 314 (365)
T cd08277 239 SDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGF 314 (365)
T ss_pred ccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCC
Confidence 3334555665553 357999999999878889999999885 99999986432 22333334443 7788776543
Q ss_pred --CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 312 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 312 --~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
...+.+++++++++.+++.+.++++|+| +++++|++.++++. ..|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 315 KSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred ChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence 3468899999999998778889999999 99999999998886 5688874
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=4.9e-46 Score=345.93 Aligned_cols=331 Identities=27% Similarity=0.393 Sum_probs=264.6
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++..+ ..+++.++|.|+++++||+|||+++++|++|++.+.|.+.......+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 456666633 23999999999999999999999999999999999886422111246889999999999999999 9999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC 174 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l 174 (364)
+||+|++.+...|..|.+|..++.++|.+..++ +....+|+|+||+.++++.++++|++++ +.+++..+++++++++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~ 158 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAI 158 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHH
Confidence 999999998889999999999999999876543 2223579999999999999999999999 5555555666655544
Q ss_pred HH-------cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec---ChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 017916 175 RR-------ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV---DDYRLSVAKELGADNIVKVSTNLQDIAEEV 244 (364)
Q Consensus 175 ~~-------~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~---~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i 244 (364)
.. ..+++|++|||+|+|++|++++|+|+++|+ .++++++ +++|.++++++|++. +++.. +++.+ .
T Consensus 159 ~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~~~~-~ 233 (355)
T cd08230 159 EQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TPVAE-V 233 (355)
T ss_pred HHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cchhh-h
Confidence 22 236789999999999999999999999999 5777766 678999999999986 44432 33332 1
Q ss_pred HHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--Ccccc----chhhhhcCcEEEeeccC-CCcHHH
Q 017916 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVP----LTPAAVREVDVVGVFRY-KNTWPL 317 (364)
Q Consensus 245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~ 317 (364)
+ ...++|++|||+|++..+..++++|+++|+++.+|.... ...++ ...++.+++++.|+... ..++++
T Consensus 234 ~-----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~ 308 (355)
T cd08230 234 K-----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQ 308 (355)
T ss_pred h-----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHH
Confidence 1 135799999999987788999999999999999996543 22333 34567799999998654 567899
Q ss_pred HHHHHHcCCC----CCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 318 CLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 318 ~~~~l~~g~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++++.++.+ .+.+.++++|++ +++.+||+.++++. +|+++++
T Consensus 309 ~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 309 AVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence 9999998872 246678899999 99999999887653 6999875
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.8e-46 Score=345.80 Aligned_cols=322 Identities=21% Similarity=0.354 Sum_probs=266.1
Q ss_pred cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE 104 (364)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
+++.+++.+.+.|+++++||+|||.++++|++|++.+.|.+. ...+|.++|||++|+|+++|+++++|++||+|+..
T Consensus 15 ~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~ 91 (375)
T PLN02178 15 ESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVG 91 (375)
T ss_pred CCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEc
Confidence 347888889999999999999999999999999998877532 12468999999999999999999999999999865
Q ss_pred CCc-CCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH
Q 017916 105 PGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR 176 (364)
Q Consensus 105 ~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~ 176 (364)
+.. .|..|.+|+.+++++|++..+.. ....+|+|+||+.+++++++++|+++++++|+.+. ...++|+++..
T Consensus 92 ~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~ 171 (375)
T PLN02178 92 VIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKY 171 (375)
T ss_pred CccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHH
Confidence 544 69999999999999999865321 11236999999999999999999999999988665 67788988865
Q ss_pred cC--CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916 177 AN--IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 177 ~~--~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
.. .++|++|+|.|+|++|++++|+|+++|++ +++++.++ ++.++++++|+++++++.+ .+.+++.. +
T Consensus 172 ~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~~-----~~~v~~~~---~- 241 (375)
T PLN02178 172 YGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTTD-----SQKMKEAV---G- 241 (375)
T ss_pred hCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCcC-----HHHHHHhh---C-
Confidence 43 46899999999999999999999999995 56665554 4578889999998876432 12344332 3
Q ss_pred CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL 332 (364)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 332 (364)
++|++|||+|....+..++++++++|+++.+|.......++...+..+++++.|.... .+.+.++++++++|++ ++.
T Consensus 242 ~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i--~~~ 319 (375)
T PLN02178 242 TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKI--VSD 319 (375)
T ss_pred CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCC--ccc
Confidence 6999999999777889999999999999999865444455666677899999998765 4678999999999998 444
Q ss_pred eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+ +.|+| +++++|++.+++++..||+|+++
T Consensus 320 i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 320 I-ELIKM--SDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred E-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence 5 67999 99999999999998899999874
No 25
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-46 Score=318.61 Aligned_cols=341 Identities=26% Similarity=0.421 Sum_probs=288.6
Q ss_pred chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916 14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (364)
Q Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
...+.+|++...+ ++|.++++..++|+.+||+||+.++++|++|...+.|.. ....+|.++|||.+|+|+.+|.+|
T Consensus 4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvGegV 80 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVGEGV 80 (375)
T ss_pred CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEecCCc
Confidence 3456788887755 899999999999999999999999999999999888754 235789999999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------ccC-----------CCCC--cceeEEEecCCceEE
Q 017916 93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------ATP-----------PVHG--SLANQVVHPADLCFK 151 (364)
Q Consensus 93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-----------~~~g--~~~~~v~~~~~~~~~ 151 (364)
+.+++||+|++.....|+.|.+|..+.-|+|..--.. +.. ..-| +|+||.+++...+.+
T Consensus 81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 9999999999999999999999999999999432111 110 0113 899999999999999
Q ss_pred CCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe
Q 017916 152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN 229 (364)
Q Consensus 152 lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~ 229 (364)
+++..+.+.++++. .+.|+|-+. +.+++++|+++.|.|-|++|+++++-||+.|+++++++|.+++|++.+++||++.
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999886 788888775 7899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchhh-hhcCcEEEe
Q 017916 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPA-AVREVDVVG 307 (364)
Q Consensus 230 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~ 307 (364)
++|-.+......+.+++++ +.++|+.|||+|+.+.+++++.+...+ |+-+.+|.......+...++ ..++.++.|
T Consensus 241 ~iNp~d~~~~i~evi~EmT---dgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G 317 (375)
T KOG0022|consen 241 FINPKDLKKPIQEVIIEMT---DGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG 317 (375)
T ss_pred ecChhhccccHHHHHHHHh---cCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence 8874322234555666664 589999999999999999999999998 99999997655444444442 234555555
Q ss_pred ec----cCCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 308 VF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 308 ~~----~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
.. ..+..+..+++.+.++++++...+++.++| +++++||+.|.+++.. |.|+.
T Consensus 318 s~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 318 SAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred EecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEe
Confidence 43 337889999999999999999999999999 9999999999999766 66665
No 26
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.1e-46 Score=311.93 Aligned_cols=305 Identities=27% Similarity=0.364 Sum_probs=263.0
Q ss_pred ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
.+.++++ +.+.+++.+.|.|++.|+|++||-+|+|+|+.|.-.++|.|. ...+|++||.|.+|+|+++|++|++
T Consensus 9 ~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG~gvtd 85 (336)
T KOG1197|consen 9 LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVGEGVTD 85 (336)
T ss_pred heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEecCCccc
Confidence 3444444 568999999999999999999999999999999998998774 3688999999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 173 (364)
+++||||+.+ +..|.|+|+..+|...++++|+.+++.+||++ ....|||..
T Consensus 86 rkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~l 137 (336)
T KOG1197|consen 86 RKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYML 137 (336)
T ss_pred cccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHH
Confidence 9999999865 36799999999999999999999999998855 489999999
Q ss_pred HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
++ ..++++|++||+|.| |++|++++|++++.|+ +++++.++.+|.+.+++-|+.+.|+|+. +|+.+++++++.
T Consensus 138 l~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~kiTn-- 212 (336)
T KOG1197|consen 138 LFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVKKITN-- 212 (336)
T ss_pred HHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHHhccC--
Confidence 85 589999999999976 9999999999999999 6788889999999999999999999754 788888888863
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-----CC----cHHHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-----KN----TWPLCLEL 321 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~ 321 (364)
++|+|+++|.+| .+++...+.+|++.|+++.+|+..+. -++++..+..+.+++.-.... +. ...+++.+
T Consensus 213 gKGVd~vyDsvG-~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~al 291 (336)
T KOG1197|consen 213 GKGVDAVYDSVG-KDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFAL 291 (336)
T ss_pred CCCceeeecccc-chhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHH
Confidence 889999999999 78999999999999999999975443 345555566666554433221 22 34577788
Q ss_pred HHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 322 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 322 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+.+|.+ ++.+.++|+| +++.+|+.++++..+.||+++.
T Consensus 292 vnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 292 VNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred hhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence 888988 7889999999 9999999999999999999975
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.3e-45 Score=337.23 Aligned_cols=312 Identities=23% Similarity=0.309 Sum_probs=267.1
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (364)
Q Consensus 27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (364)
..+++.+.|.|+++++||+|||+++++|++|+..+.|.+.. ...|.++|||++|+|+++|++++.|++||+|+..+.
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 89 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL 89 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence 46899999999999999999999999999999988875421 234789999999999999999999999999987654
Q ss_pred -cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCE
Q 017916 107 -ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETN 184 (364)
Q Consensus 107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~ 184 (364)
..|..|.+|..++.++|.+..+++. ..+|+|+||+.+++++++++|+++++++++.+. .+.+||++++.+++++|++
T Consensus 90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~ 168 (329)
T TIGR02822 90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR 168 (329)
T ss_pred cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence 4699999999999999998776553 457999999999999999999999998888554 7889999998888999999
Q ss_pred EEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (364)
Q Consensus 185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~ 264 (364)
|||+|+|++|++++|+|+.+|+ .+++++.+++|.++++++|+++++++.... ..++|+++++.+.
T Consensus 169 VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------------~~~~d~~i~~~~~ 233 (329)
T TIGR02822 169 LGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP--------------PEPLDAAILFAPA 233 (329)
T ss_pred EEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC--------------cccceEEEECCCc
Confidence 9999999999999999999999 578888899999999999999887632110 2368999998888
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChh
Q 017916 265 NKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 342 (364)
Q Consensus 265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 342 (364)
++.+...+++|+++|+++.+|.... ...++...+..+++++.+.... +..+.++++++++|++ + .++++|+| +
T Consensus 234 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i--~-~i~~~~~l--~ 308 (329)
T TIGR02822 234 GGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGV--R-VTTHTYPL--S 308 (329)
T ss_pred HHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCC--e-eEEEEEeH--H
Confidence 8899999999999999999996432 2234445566788898887654 4568889999999998 3 35788999 9
Q ss_pred hHHHHHHHHhcCCCceEEEE
Q 017916 343 EVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 343 ~~~~a~~~~~~~~~~gkvvv 362 (364)
++++|++.++++...||+|+
T Consensus 309 ~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 309 EADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHcCCCceEEEe
Confidence 99999999999999999987
No 28
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3.1e-45 Score=338.25 Aligned_cols=324 Identities=23% Similarity=0.330 Sum_probs=259.4
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCc-cCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
.+++++.+|+.+++.+.|.|. +++||+|||+++|||++|++.+.|.+.... ...+|.++|||++|+|+++|.+ .|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~ 79 (341)
T cd08237 3 NQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYK 79 (341)
T ss_pred ccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccC
Confidence 567888999999999999995 999999999999999999999987643211 1357999999999999998764 799
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~ 176 (364)
+||+|+..+...|. |+.| ...++|.+..+.+. ..+|+|+||+++++++++++|+++++++|+++.+++++++++..
T Consensus 80 vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~~ 155 (341)
T cd08237 80 VGTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAISR 155 (341)
T ss_pred CCCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHHH
Confidence 99999998776676 4455 45678887765542 35799999999999999999999999998888899999999853
Q ss_pred ---cCCCCCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 177 ---ANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 177 ---~~~~~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+.+++|++|||.|+|++|++++|+|+. +|+..|++++.+++|.+++++++.+..++ + +.+ .
T Consensus 156 ~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~~--~ 220 (341)
T cd08237 156 FEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IPE--D 220 (341)
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hhh--c
Confidence 457899999999999999999999986 67657888888999999998766543211 1 111 2
Q ss_pred CCccEEEECCC---CHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC---
Q 017916 253 TGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG--- 325 (364)
Q Consensus 253 ~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g--- 325 (364)
.++|++||++| .+..+..++++|+++|+++.+|....+..++...++.+++++.+.... .+.+++++++++++
T Consensus 221 ~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 300 (341)
T cd08237 221 LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEV 300 (341)
T ss_pred cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcc
Confidence 36999999999 456889999999999999999975444455556678899999998765 46789999999999
Q ss_pred CCCCCCceEEEeeCC-hhhHHHHHHHHhcCCCceEEEEeC
Q 017916 326 KIDVKPLVTHRFGFS-QKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
..++.+.+++.|+++ .+++.+|++.+.++ ..||+|+++
T Consensus 301 ~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 301 AEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred cCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 334578888999872 24566666666554 789999874
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.8e-44 Score=331.31 Aligned_cols=329 Identities=21% Similarity=0.309 Sum_probs=269.2
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
+++++...+ ..+++.+++.|+++++||+|||.++++|+.|+..+.|.+.. ..+|.++|||++|+|+++|+++++|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCccccc
Confidence 567777765 67999999999999999999999999999999988764321 24689999999999999999999999
Q ss_pred CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhH
Q 017916 97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS 168 (364)
Q Consensus 97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~ 168 (364)
+||+|+..+. ..|..|.+|..++.++|.+..+.. ....+|+|+||+.++.+.++++|+++++++|+.++ .+.
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 166 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV 166 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence 9999986543 469999999999999998864321 11246999999999999999999999999988665 778
Q ss_pred HHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHH-HHHHHcCCCeEEecCCCcccHHHHHHH
Q 017916 169 VGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEK 246 (364)
Q Consensus 169 ~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~i~~ 246 (364)
+||+++.. ...++|++|+|+|+|++|++++|+|+++|++ +++++.++++. ..++++|++.++++.. .+.+++
T Consensus 167 ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~-----~~~~~~ 240 (357)
T PLN02514 167 TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD-----AAEMQE 240 (357)
T ss_pred HHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC-----hHHHHH
Confidence 99999865 4568999999998899999999999999995 55565666555 4556799987665322 123333
Q ss_pred HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 325 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g 325 (364)
. ..++|++|||+|....+..++++++++|+++.+|.......+....++.+++++.+.+.. ...++++++++++|
T Consensus 241 ~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g 316 (357)
T PLN02514 241 A----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEK 316 (357)
T ss_pred h----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhC
Confidence 2 236999999999777889999999999999999965444455566677889999998765 45789999999999
Q ss_pred CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++ .+.+ ++|+| +++.+||+.++++...||+++++
T Consensus 317 ~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 317 GL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred CC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence 87 5555 57899 99999999999998889999864
No 30
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.5e-43 Score=327.57 Aligned_cols=335 Identities=28% Similarity=0.477 Sum_probs=281.1
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|+++++.+++.+++.+.+.|+++++||+||+.++++|+.|+....|.+.. ..+|.++|+|++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence 46788888889999999999999999999999999999999988765421 246899999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 177 (364)
||+|+..+..+|+.|.+|..+++++|.++.+.+. ..+|+|++|+.++.++++++|++++++.++.+.++.+++++++.+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~ 156 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT 156 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence 9999999888999999999999999998776543 347999999999999999999999988877666778888766788
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
++++|++|||+|+|.+|++++|+|+. +|++.+++++++++|.++++++|++.++++.. .++.+.+.. .+.++|
T Consensus 157 ~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~d 230 (339)
T PRK10083 157 GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKPT 230 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCCC
Confidence 99999999999999999999999996 69988888988999999999999998877543 445544422 134567
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEE
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR 336 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 336 (364)
++||++|++..+...+++|+++|+++.+|............+..+.+++.+.....+.+++++++++++++++.+.+.+.
T Consensus 231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 310 (339)
T PRK10083 231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHT 310 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeee
Confidence 99999998778899999999999999998654322233334456778887776667789999999999998544357788
Q ss_pred eeCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017916 337 FGFSQKEVEEAFETSARG-GTAIKVMFNL 364 (364)
Q Consensus 337 ~~~~~~~~~~a~~~~~~~-~~~gkvvv~~ 364 (364)
|++ +++++|++.++++ ...+|+++++
T Consensus 311 ~~l--~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 311 FDF--QHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred ecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence 999 9999999999865 4679999874
No 31
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.7e-43 Score=328.48 Aligned_cols=338 Identities=32% Similarity=0.525 Sum_probs=280.3
Q ss_pred eeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC---
Q 017916 19 MAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT--- 94 (364)
Q Consensus 19 ~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 94 (364)
+++++.... .+++++.+.|.++++||+|||.++++|+.|+....|.+.. ..+|.++|+|++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence 567777654 9999999999999999999999999999999988875421 356889999999999999999986
Q ss_pred ---CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCCcceeEEEecCC-ceEECCCCCCccchhhh
Q 017916 95 ---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMC 164 (364)
Q Consensus 95 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~-~~~~lP~~~~~~~aa~~ 164 (364)
|++||+|++.+..+|+.|..|..+++++|++..+++.. ...|+|++|+.++++ +++++|++++...|+++
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999999999999999999999999999987665431 246999999999996 79999999998888877
Q ss_pred -hhhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCc-ccHH
Q 017916 165 -EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIA 241 (364)
Q Consensus 165 -~~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~ 241 (364)
.++.|||+++.. ...++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.+++++... .++.
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 238 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRR 238 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHH
Confidence 589999999966 4456999999998899999999999999996678888899999999999998887754321 1222
Q ss_pred HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeeccC-CCcHHHH
Q 017916 242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRY-KNTWPLC 318 (364)
Q Consensus 242 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (364)
..++++. .+.++|++|||+|+...+...+++++++|+++.+|.... ...+....+..+++++.+.... .+.++++
T Consensus 239 ~~i~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
T cd08231 239 AIVRDIT--GGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRA 316 (361)
T ss_pred HHHHHHh--CCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHH
Confidence 3454443 356899999999977788999999999999999985432 2233334467889999888765 5678999
Q ss_pred HHHHHcC--CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 319 LELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 319 ~~~l~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++++.++ .+.+.+.+.++|++ +++++|++.++++. .+|++|+.
T Consensus 317 ~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~ 361 (361)
T cd08231 317 VRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVIDP 361 (361)
T ss_pred HHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeCC
Confidence 9999988 55556778899999 99999999998876 58999863
No 32
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=6.5e-44 Score=324.82 Aligned_cols=305 Identities=21% Similarity=0.300 Sum_probs=247.3
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeC-cccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGIC-GSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~-~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
++++++.+++.+++.+.+.|+++++||+|||+++++| .+|+..+.|.+.......+|.++|||++|+|+++|+++ .|+
T Consensus 2 ~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~ 80 (308)
T TIGR01202 2 TQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFR 80 (308)
T ss_pred ceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCC
Confidence 5788888889999999999999999999999999997 58988887754322113579999999999999999998 699
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~ 176 (364)
+||||+..+ ..|..|. .+..|+|+||++++++.++++|++++++. +++.++.+||+++++
T Consensus 81 vGdrV~~~~----~~c~~~~---------------~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~~ 140 (308)
T TIGR01202 81 PGDRVFVPG----SNCYEDV---------------RGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVAG 140 (308)
T ss_pred CCCEEEEeC----ccccccc---------------cccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHHh
Confidence 999998732 2222211 01359999999999999999999998754 555667899999976
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
.. .++++|||+|+|++|++++|+|+++|++++++++..++|.+.++.+ .++++.. + .+.++|
T Consensus 141 ~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g~D 202 (308)
T TIGR01202 141 AE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRDYR 202 (308)
T ss_pred cc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCCCC
Confidence 53 4689999999999999999999999998787887777776665543 2333211 0 145799
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEE
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTH 335 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~ 335 (364)
++|||+|+...++.++++++++|+++.+|.......++...++.+++++.+.... .+.++++++++++|++++.+.+++
T Consensus 203 vvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~ 282 (308)
T TIGR01202 203 AIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITH 282 (308)
T ss_pred EEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccce
Confidence 9999999877889999999999999999976554556666777888999887765 567999999999999977778899
Q ss_pred EeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 336 RFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 336 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
.|+| +++++|++.+.++...+|++++
T Consensus 283 ~~~l--~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 283 QRPA--SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred eecH--HHHHHHHHHHhcCcCceEEEeC
Confidence 9999 9999999998877778999874
No 33
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2e-42 Score=320.36 Aligned_cols=338 Identities=58% Similarity=0.988 Sum_probs=281.8
Q ss_pred eEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017916 20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (364)
Q Consensus 20 ~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 99 (364)
++++.++..+++++.+.|.+.++||+|||.++++|+.|+..+.+...+......|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 80 (343)
T cd05285 1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD 80 (343)
T ss_pred CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCC
Confidence 35778888999999999999999999999999999999987643222222234677899999999999999999999999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCC
Q 017916 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179 (364)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~ 179 (364)
+|++.+..+|..|.+|+.++.++|.+..++......|+|++|+.+++++++++|+++++++|+.+.++.+|+++++.+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~ 160 (343)
T cd05285 81 RVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGV 160 (343)
T ss_pred EEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCC
Confidence 99998888999999999999999988655443345799999999999999999999999998877778889988888999
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCccc---HHHHHHHHHHHcCCCcc
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD---IAEEVEKIQKAMGTGID 256 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~d 256 (364)
++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.+++++. .+ +.+.++++. .++++|
T Consensus 161 ~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~--~~~~~d 236 (343)
T cd05285 161 RPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL--GGKGPD 236 (343)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh--CCCCCC
Confidence 99999999988999999999999999975788888889999999999998887543 33 355565553 356799
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEE
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR 336 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 336 (364)
++|||+|+...++..+++|+++|+++.+|........+......+.+++.+.....+.+++++++++++.+.+.+.+.+.
T Consensus 237 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 316 (343)
T cd05285 237 VVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHR 316 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEE
Confidence 99999997668899999999999999998544333334445677888888877666788999999999987544556788
Q ss_pred eeCChhhHHHHHHHHhcCC-CceEEEEe
Q 017916 337 FGFSQKEVEEAFETSARGG-TAIKVMFN 363 (364)
Q Consensus 337 ~~~~~~~~~~a~~~~~~~~-~~gkvvv~ 363 (364)
|++ +++.+|++.+.++. ..+|++|.
T Consensus 317 ~~l--~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 317 FPL--EDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred EeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence 899 99999999998874 56999873
No 34
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.3e-42 Score=321.04 Aligned_cols=338 Identities=30% Similarity=0.413 Sum_probs=277.4
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|+++++.++..+++.+.+.|.+.++||+|||.++++|+.|+....+.+.. ...|.++|+|++|+|+++|++++.+++
T Consensus 1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence 57888888888999999999999999999999999999999887765422 356899999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHHH
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLH 172 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~~ 172 (364)
||+|++.+..+|..|..|..++.++|.+...+ ......|+|++|+.++.+ .++++|+++++.+++.++ .+.+|++
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~ 157 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH 157 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence 99999988789999999999999999875311 112346999999999974 899999999999988774 7889999
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+++.+++++|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++.. .++.+.++.+. .+
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~ 233 (351)
T cd08285 158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--GG 233 (351)
T ss_pred HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--CC
Confidence 987788999999999988999999999999999987888988999999999999988877543 46666665543 35
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc--cccchh--hhhcCcEEEeecc--CCCcHHHHHHHHHcCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM--TVPLTP--AAVREVDVVGVFR--YKNTWPLCLELLRSGK 326 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~l~~g~ 326 (364)
.++|++|||+|+.+.+..++++|+++|+++.+|...... ..+... ...+..++.+... ..+.++++++++++|+
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ 313 (351)
T cd08285 234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGR 313 (351)
T ss_pred CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCC
Confidence 689999999998788899999999999999998544321 222111 2234555555443 2567999999999999
Q ss_pred CCCCC-ceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916 327 IDVKP-LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 364 (364)
Q Consensus 327 ~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~ 364 (364)
+.+.. ...+.|++ +++++|++.++++. ..+|+++++
T Consensus 314 i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 314 VDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence 85522 34456888 99999999999886 579999875
No 35
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=5.3e-42 Score=318.42 Aligned_cols=339 Identities=30% Similarity=0.578 Sum_probs=281.1
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC--C----ccCCCCcccccceeEEEEEeCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA--D----FVVKEPMVIGHECAGVIEKVGSE 91 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~--~----~~~~~p~~~G~e~~G~V~~vG~~ 91 (364)
|+++++.++..+++.+.+.|++.+++|+||+.++++|+.|+..+.|.+.. . ....+|.++|+|++|+|+++|++
T Consensus 1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~ 80 (350)
T cd08256 1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG 80 (350)
T ss_pred CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence 57888888888999999999999999999999999999999988764210 0 00146789999999999999999
Q ss_pred CC--CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-CCCCCcceeEEEecCC-ceEECCCCCCccchhhhhhh
Q 017916 92 VK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPL 167 (364)
Q Consensus 92 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~-~~~~lP~~~~~~~aa~~~~~ 167 (364)
++ +|++||+|++.+..+|+.|++|..++.+.|....+++. ....|+|++|+.++++ .++++|+++++++|+.+.++
T Consensus 81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~ 160 (350)
T cd08256 81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL 160 (350)
T ss_pred cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence 99 99999999999999999999999999999986654433 1246999999999988 57899999999888866788
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916 168 SVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 168 ~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
.++|++++.+++++|++|||.|+|.+|++++++|+++|+..++++++++++.++++++|++.++++. ..++.+.+.++
T Consensus 161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~ 238 (350)
T cd08256 161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL 238 (350)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence 8999998778999999999977799999999999999998888888899999999999998776643 35666666655
Q ss_pred HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhh-hhcCcEEEeeccCCCcHHHHHHHHHcCC
Q 017916 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFRYKNTWPLCLELLRSGK 326 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 326 (364)
. .+.++|++||++|....+..++++++++|+++.+|............+ ..+++++.+.......+.+++++++++.
T Consensus 239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~ 316 (350)
T cd08256 239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGR 316 (350)
T ss_pred h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCC
Confidence 3 245799999999976778899999999999999985433323333322 3566777777666677899999999999
Q ss_pred CCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
+.+.+.+.+.|++ +++.+|++.++++...+|+++
T Consensus 317 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 317 LPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence 8544346788999 999999999999988999875
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.6e-42 Score=326.21 Aligned_cols=330 Identities=25% Similarity=0.372 Sum_probs=263.9
Q ss_pred cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hhcccCC---ccCCCCcccccceeEEEEEeCCCC
Q 017916 17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEV 92 (364)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
.++++++.++..+++.+.|.|+++++||+|||.++|+|++|++.+ .|..... ....+|.++|||++|+|+++|+++
T Consensus 2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v 81 (410)
T cd08238 2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW 81 (410)
T ss_pred CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence 367888888889999999999999999999999999999999876 3432111 012468899999999999999999
Q ss_pred C-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----ceEECCCCCCccchhhhhhh
Q 017916 93 K-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCEPL 167 (364)
Q Consensus 93 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~~lP~~~~~~~aa~~~~~ 167 (364)
+ +|++||||++.+...|..|..|.. ++ ...+|+|+||+.++++ +++++|+++++++|+++.++
T Consensus 82 ~~~~~vGdrV~~~~~~~c~~~~~c~~-----------~g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl 149 (410)
T cd08238 82 QGKYKPGQRFVIQPALILPDGPSCPG-----------YS-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL 149 (410)
T ss_pred cCCCCCCCEEEEcCCcCCCCCCCCCC-----------cc-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence 8 699999999988888888877731 01 1246999999999987 68999999999998876444
Q ss_pred HHH---HHHH---------HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCC--CCEEEEEecChhHHHHHHHc-------
Q 017916 168 SVG---LHAC---------RRANIGPETNVLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDYRLSVAKEL------- 225 (364)
Q Consensus 168 ~~a---~~~l---------~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g--~~~vv~~~~~~~~~~~~~~l------- 225 (364)
+++ +.++ +.+++++|++|+|+|+ |++|++++|+|+++| +..|++++.+++|.+.++++
T Consensus 150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~ 229 (410)
T cd08238 150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS 229 (410)
T ss_pred HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence 433 3322 3467899999999986 999999999999975 45688899999999999997
Q ss_pred -CCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC-CC--Cccccchhhhh
Q 017916 226 -GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HH--EMTVPLTPAAV 300 (364)
Q Consensus 226 -g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~~~~ 300 (364)
|++ .++++.. ..++.+.+++++ .+.++|++||++|++..+..++++++++|+++.++.. .. ...++...+..
T Consensus 230 ~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~ 306 (410)
T cd08238 230 RGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY 306 (410)
T ss_pred cCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence 665 3454322 145666666554 3568999999999888999999999999988776432 11 23455556788
Q ss_pred cCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 301 REVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 301 ~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++++.|.... ..+++++++++++|++++.+.++++|+| +++++|++.+. +...||+++.+
T Consensus 307 ~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 307 NNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred cCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence 99999998764 5678999999999999777789999999 99999999999 77889999863
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.1e-41 Score=314.11 Aligned_cols=329 Identities=23% Similarity=0.373 Sum_probs=278.6
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++..+ ..+++.+.|.|++.++||+||+.++++|+.|+..+.|.... ...|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence 578888877 68999999999999999999999999999999988764321 34588999999999999999999999
Q ss_pred CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916 97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (364)
Q Consensus 97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l 174 (364)
+||+|++.+. ..|.+|.+|..++.+.|.+....+. ..+|+|++|+.++.++++++|+++++.+++.+. .+.+||+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 9999988553 5699999999999999998765443 346999999999999999999999998888664 788899998
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
+...++++++|||+|+|.+|++++++|+++|+ .+++++.++++.++++++|+++++++.. .++.+.++.+ .+
T Consensus 157 ~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~~ 228 (333)
T cd08296 157 RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----GG 228 (333)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----CC
Confidence 77789999999999999999999999999999 4777778889999999999988877543 4565555543 36
Q ss_pred ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCce
Q 017916 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV 333 (364)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 333 (364)
+|++||+.|.+..+...+++++++|+++.+|.......++...++.+++++.+.... ...+..+++++.++++ .+.+
T Consensus 229 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~v 306 (333)
T cd08296 229 AKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV--RPMV 306 (333)
T ss_pred CCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC--CceE
Confidence 999999998778889999999999999999865444445555566899999998654 5678889999988887 4444
Q ss_pred EEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 334 THRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
..|++ +++.+||+.++++...||+|++
T Consensus 307 -~~~~~--~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 307 -ETFPL--EKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred -EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence 67899 9999999999999999999985
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.6e-41 Score=314.11 Aligned_cols=334 Identities=28% Similarity=0.491 Sum_probs=280.9
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++..+ ..+++.+.+.|++.+++|+|||.++++|+.|+....|.+.......+|.++|+|++|+|+++|++++.|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 467777755 6788999999999999999999999999999998887654333456689999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~ 175 (364)
+||+|++.+..+|+.|..|..+..++|.+..+.+. ..+|+|++|+.+++++++++|+++++++++.++ .+.+||+++.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~ 159 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK 159 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 99999999999999999999999999999988776 568999999999999999999999998888775 7889999985
Q ss_pred H--cCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 176 R--ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 176 ~--~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
. ..+.++++|||+|+|.+|++++|+|+.+| . .++++++++++.+.++++|++++++++. . +.+.++++. .+
T Consensus 160 ~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~--~~ 233 (340)
T cd05284 160 KALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELT--GG 233 (340)
T ss_pred HhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHh--CC
Confidence 4 46889999999999779999999999999 6 5677778888999999999988877543 2 666666553 24
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeecc-CCCcHHHHHHHHHcCCCCCCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR-YKNTWPLCLELLRSGKIDVKP 331 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~~~ 331 (364)
.++|+++|++|+.......+++|+++|+++.+|.... ..........+++++.+... ....+.+++++++++.+. +
T Consensus 234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~ 310 (340)
T cd05284 234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK--V 310 (340)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC--c
Confidence 5799999999977888999999999999999985442 22333333568888887654 356788999999999984 3
Q ss_pred ceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 332 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
..+.|++ +++++|++.++++...||+++.+
T Consensus 311 -~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 311 -EITKFPL--EDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred -ceEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence 3467888 99999999999999999999864
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.3e-41 Score=317.58 Aligned_cols=339 Identities=30% Similarity=0.485 Sum_probs=278.9
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.+++.+++.+.+.|.+ .+++|+||+.++++|++|+..+.|.+.. ..+|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence 5788888889999999999988 4999999999999999999998886533 34688999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc-------------------cCCCCCcceeEEEecCC--ceEECCCC
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-------------------TPPVHGSLANQVVHPAD--LCFKLPDN 155 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~g~~~~~v~~~~~--~~~~lP~~ 155 (364)
+||+|++.+..+|+.|.+|+.++.++|+++.... .....|+|++|+.++++ +++++|++
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 9999999988899999999999999998754321 01246999999999988 89999999
Q ss_pred CCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916 156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (364)
Q Consensus 156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~ 234 (364)
+++++|+.++ .+.+||++++.+++++|++|||+|+|.+|++++++|+++|+..+++++.++++.+++++++...++++.
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~ 237 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE 237 (386)
T ss_pred CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCC
Confidence 9999988765 788999999778899999999998899999999999999986689998999999999998444555543
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEECCCC---------------------HHHHHHHHHhcccCCEEEEEcCCCC-Ccc
Q 017916 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---------------------NKTMSTALSATRAGGKVCLVGMGHH-EMT 292 (364)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~~~~-~~~ 292 (364)
.. .++.+.++++. .+.++|++||++|+ ...+..++++++++|+++.++.... ...
T Consensus 238 ~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 238 EV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 31 13666666553 24579999999974 3467889999999999999985433 222
Q ss_pred ccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916 293 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 364 (364)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~ 364 (364)
........+++++.+.... .+.+++++++++++++...+.+.+.|++ +++.+|++.++++. ..+|++++.
T Consensus 315 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred cCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEecC
Confidence 3333456788888886544 5678899999999998554456788888 99999999998876 578999863
No 40
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3.1e-41 Score=315.21 Aligned_cols=338 Identities=27% Similarity=0.430 Sum_probs=273.5
Q ss_pred cceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 17 ~~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
.++++++.. ++.+++++.|.|++.++||+|||+++++|++|++.+.|.+ ...+|.++|+|++|+|+++|++++.+
T Consensus 7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCccC
Confidence 367777664 4679999999999999999999999999999999988754 13568899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCceEECCCC
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPDN 155 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~v~~~~~~~~~lP~~ 155 (364)
++||+|++.+..+|+.|.+|..++.++|.+...... ....|+|+||+.+++++++++|++
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 999999998888999999999999999987643210 013589999999999999999999
Q ss_pred CCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916 156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (364)
Q Consensus 156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~ 233 (364)
+++++++++. .+.+||+++ +.+++++|++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|+++++++
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 9999988776 888999886 56889999999999889999999999999999668888889999999999999888875
Q ss_pred CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhc-ccCCEEEEEcCCCCCccccchh-hhhcCcEEEeeccC
Q 017916 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFRY 311 (364)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 311 (364)
.+.++++.+.++++. ++++|++|||+|++..+..++..+ +++|+++.+|............ ...++.++.+....
T Consensus 243 ~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~ 319 (373)
T cd08299 243 QDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFG 319 (373)
T ss_pred cccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEec
Confidence 443334566666553 357999999999777777766655 6799999998643322222222 23456777776543
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 312 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 312 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
...+.++++.+.++.+++.+.+.+.|++ +++.+|++.++++.. .|+++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 320 GWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred CCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence 2467778888888877666678899999 999999999887754 5888764
No 41
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.4e-41 Score=311.77 Aligned_cols=334 Identities=38% Similarity=0.676 Sum_probs=273.7
Q ss_pred EEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017916 22 WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101 (364)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 101 (364)
++++.+.+++++.++|.++++||+|||.++++|+.|+..............+|.++|+|++|+|+++|+++++|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence 56788999999999999999999999999999999988764211111223467899999999999999999999999999
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (364)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 177 (364)
++.+..+|+.|.+|..+..+.|.++.+.+. ...+|+|++|+.+++++++++|+++++++|+.+.+++++|+++...
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~ 161 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA 161 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence 999999999999999999999998755442 1247999999999999999999999999888766888999998664
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
...++++|||+|+|.+|++++|+|+.+|+..+++++.++++.++++++|++.+++++.. + ++.+.. ...++|+
T Consensus 162 ~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~--~----~~~~~~-~~~~vd~ 234 (339)
T cd08232 162 GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARD--P----LAAYAA-DKGDFDV 234 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCch--h----hhhhhc-cCCCccE
Confidence 43499999998889999999999999999667888888888889999999888775432 2 222221 2346999
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 337 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~ 337 (364)
+||+.|+...++..+++|+++|+++.++............+..+++++.+.....+.+++++++++++.+.+.+.+.+.|
T Consensus 235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 314 (339)
T cd08232 235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVF 314 (339)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEe
Confidence 99999976788999999999999999975332222333344567788877766667789999999999986556677889
Q ss_pred eCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 338 GFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 338 ~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++ +++++|++.+.++...||+|+++
T Consensus 315 ~~--~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 315 PL--EEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred cH--HHHHHHHHHHHhCCCceeEEEeC
Confidence 88 99999999999888899999874
No 42
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=8.6e-41 Score=309.27 Aligned_cols=337 Identities=32% Similarity=0.569 Sum_probs=274.4
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
||++.+.++ +.+++.+.|.|.++++||+||+.++++|+.|+.++.+..........|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 356666544 5799999999999999999999999999999987765322111234678999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~ 176 (364)
+||+|++.+..+|..|..|..+++++|.+..+.+ ...+|+|++|+.++.++++++|+++++.+++.+..+.++++++..
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~ 159 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS 159 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc
Confidence 9999999999999999999999999998754333 346799999999999999999999998888766676777665533
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
...+|++|+|+|+|++|++++|+|+++|++.+++++.++++.++++++|++.+++++. .++.+.++.+. .++++|
T Consensus 160 -~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~~~~~d 234 (341)
T PRK05396 160 -FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--MTEGFD 234 (341)
T ss_pred -CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--CCCCCC
Confidence 3468999999888999999999999999976777788889999999999998877543 46666666553 256899
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceE
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVT 334 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~ 334 (364)
++|||.|+...+..++++|+++|+++.+|.......+....+..+++++.+.... ...+..++++++++ +.+.+.+.
T Consensus 235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 313 (341)
T PRK05396 235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIIT 313 (341)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheE
Confidence 9999999888889999999999999999865444444445666788887776422 34566788899988 43355677
Q ss_pred EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 335 HRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 335 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.|++ +++.+|++.+.++. .||+++++
T Consensus 314 ~~~~l--~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 314 HRFPI--DDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred EEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence 88898 99999999998876 79999875
No 43
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.1e-40 Score=309.28 Aligned_cols=338 Identities=33% Similarity=0.533 Sum_probs=277.4
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.+++.+++.+.|.|.+ .+++|+|||.++++|+.|+....|.+.. ..+|.++|+|++|+|+++|++++.++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccC
Confidence 4678888888899999999998 8999999999999999999988775532 45688999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc--cCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL 171 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~ 171 (364)
+||+|++.+..+|+.|.+|+.+..+.|.++.... .....|+|++|+.++++ +++++|+++++++|+.++ .+.+||
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~ 157 (347)
T cd05278 78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF 157 (347)
T ss_pred CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence 9999999999999999999999999998765332 12346999999999997 999999999999988775 789999
Q ss_pred HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+++...++++|++|||+|+|.+|++++|+|+.+|...++++++++++.++++++|++.++++.. .++.+.++... .
T Consensus 158 ~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--~ 233 (347)
T cd05278 158 HGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--G 233 (347)
T ss_pred ehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--C
Confidence 9987788999999999877999999999999999756778888888999999999888877543 45666666543 2
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch-hhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV 329 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~ 329 (364)
++++|++||++|+...+...+++|+++|+++.+|........... ....+++++.+.... .+.++++++++.++.+.+
T Consensus 234 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (347)
T cd05278 234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDP 313 (347)
T ss_pred CCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCCh
Confidence 468999999999767889999999999999999854332211111 223566666664332 467899999999999854
Q ss_pred CCceEEEeeCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017916 330 KPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL 364 (364)
Q Consensus 330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 364 (364)
.+.+...|++ +++++|++.+..+.. .+|++++.
T Consensus 314 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 314 SKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred hHcEEEEecH--HHHHHHHHHHhcCCCCceEEEecC
Confidence 4346688888 999999999988776 78999863
No 44
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.9e-40 Score=307.50 Aligned_cols=338 Identities=32% Similarity=0.538 Sum_probs=280.5
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.++..+++.+.+.|++ .++||+|||.++++|+.|+..+.|.+.. ...|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence 4677788788899999999985 8999999999999999999988875432 23478999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+||+|++.+...|..|++|..+..+.|....+..+...+|+|++|+.++++ .++++|++++..+++.+. .+++||.+
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 157 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC 157 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence 999999998888999999999988888877665444467999999999987 999999999988888664 77889987
Q ss_pred H-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 174 l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+ +..++++|++|||+|+|++|++++|+|+.+|+..+++++.++++.++++++|++.++++.. .++...+.++. .+
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~ 233 (345)
T cd08286 158 GVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELT--DG 233 (345)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHh--CC
Confidence 6 5688999999999988999999999999999546777888889999999999988877543 45666665554 24
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCc
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPL 332 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 332 (364)
.++|++|||+|....+..++++|+++|+++.+|.......++...+..+++++.+.......+++++++++++.+.+.+.
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (345)
T cd08286 234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKL 313 (345)
T ss_pred CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHc
Confidence 67999999999878889999999999999999864433444445556688888775544467888999999999865555
Q ss_pred eEEEeeCChhhHHHHHHHHhcCC--CceEEEEeC
Q 017916 333 VTHRFGFSQKEVEEAFETSARGG--TAIKVMFNL 364 (364)
Q Consensus 333 ~~~~~~~~~~~~~~a~~~~~~~~--~~gkvvv~~ 364 (364)
+.++|++ +++++|++.+++.. ...|+++++
T Consensus 314 ~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 314 VTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred EEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence 7788999 99999999998763 456999875
No 45
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.4e-40 Score=310.32 Aligned_cols=334 Identities=28% Similarity=0.473 Sum_probs=275.2
Q ss_pred eeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 19 MAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 19 ~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
+++++. ++..+++.+.+.|.+++++|+||+.++++|+.|++.+.+.+. ...|.++|+|++|+|+++|++++++++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence 466666 456899999999999999999999999999999998876432 346789999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC--------------------CCCcceeEEEecCCceEECCCCCC
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VHGSLANQVVHPADLCFKLPDNVS 157 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~v~~~~~~~~~lP~~~~ 157 (364)
||+|++.+...|..|.+|+.+++++|......+..+ ..|+|++|+.++++.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 999999988899999999999999997765432100 247999999999999999999999
Q ss_pred ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916 158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235 (364)
Q Consensus 158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~ 235 (364)
+++|+.+. .+.+||+++ +.+++++|++|||+|+|++|++++++|+.+|++.++++++++++.++++++|++++++...
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~ 237 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD 237 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc
Confidence 99888776 788999887 5688999999999988999999999999999987888888999999999999988776543
Q ss_pred CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc-cCCEEEEEcCCC--CCccccchhhhhcCcEEEeecc--
Q 017916 236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFR-- 310 (364)
Q Consensus 236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~-- 310 (364)
.+.++.+.++++. ++++|++||++|+...+...+++++ ++|+++.+|... ....+....+ .+..++.+.+.
T Consensus 238 ~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~ 313 (365)
T cd05279 238 QDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG 313 (365)
T ss_pred ccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence 2225666666553 4689999999997788899999999 999999998543 2333444444 56677776543
Q ss_pred --CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 311 --YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 311 --~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
..+.+.+++++++++.+.+.+...++|++ +++++|++.++++.. .|++++
T Consensus 314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~~ 365 (365)
T cd05279 314 WKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTILT 365 (365)
T ss_pred CchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeeeC
Confidence 35678899999999998655567888999 999999999987754 466653
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.3e-40 Score=313.69 Aligned_cols=342 Identities=22% Similarity=0.250 Sum_probs=277.7
Q ss_pred chhcceeEEEec-----C-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCcc------CCC-Ccccccc
Q 017916 14 GEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV------VKE-PMVIGHE 80 (364)
Q Consensus 14 ~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~------~~~-p~~~G~e 80 (364)
.+.+|+++++.. + ..+++.+.|.|.++++||+|||.++++|..|+....|.....+. ... +.++|+|
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 456688887642 2 36899999999999999999999999999999887664211000 012 3589999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (364)
Q Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~ 160 (364)
++|+|+++|++++.+++||+|++.+...|+.|+.|..+..++|.+..+++....+|+|++|+.++..+++++|+++++++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999999877777656679999999999999999999999988
Q ss_pred hhhhh-hhHHHHHHHHH---cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916 161 GAMCE-PLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235 (364)
Q Consensus 161 aa~~~-~~~~a~~~l~~---~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~ 235 (364)
++.+. .+.+||+++.. +++++|++|||+|+ |.+|++++++|+.+|++ +++++.++++.++++++|++.++++++
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~~ 247 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRRD 247 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 87654 88999999843 67899999999997 99999999999999995 556678899999999999998887533
Q ss_pred Cc--------------------ccHHHHHHHHHHHcCC-CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccc
Q 017916 236 NL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTV 293 (364)
Q Consensus 236 ~~--------------------~~~~~~i~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~ 293 (364)
.+ ..+.+.+.++. .+. ++|++||++|+ ..+...+++++++|+++.+|.... ....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 324 (393)
T cd08246 248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNHTY 324 (393)
T ss_pred cccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCCCC
Confidence 11 12444454443 244 79999999994 778899999999999999985332 2234
Q ss_pred cchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcC-CCceEEEEe
Q 017916 294 PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 363 (364)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~ 363 (364)
....+..++.++.+.... .+.+.+++++++++.+ .+.+.++|++ +++++|++.+.++ ...||+++-
T Consensus 325 ~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 325 DNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred cHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence 445566777788776554 4578899999999988 4557788999 9999999999998 789999874
No 47
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.1e-40 Score=307.06 Aligned_cols=334 Identities=30% Similarity=0.508 Sum_probs=275.7
Q ss_pred ceeEEEecCCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~-~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.++..+++.+.++|++. +++|+|||.++++|+.|+....|.+. ...|.++|+|++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccC
Confidence 46777777889999999999985 99999999999999999988876442 34578999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVG 170 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a 170 (364)
+||+|++.+..+|++|.+|..+..+.|.+...+ +....+|+|++|+.++++ +++++|+++++++++.+. .+.+|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta 156 (344)
T cd08284 77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG 156 (344)
T ss_pred CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence 999999998899999999999999999887655 223346999999999975 999999999998888664 88999
Q ss_pred HHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 171 ~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
|++++..++++|++|||+|+|.+|++++|+|+.+|+..+++++.++++.++++++|+. .+++ ...++...++++.
T Consensus 157 ~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~~l~~~~-- 231 (344)
T cd08284 157 YFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF--EDAEPVERVREAT-- 231 (344)
T ss_pred HhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec--CCcCHHHHHHHHh--
Confidence 9999778889999999998899999999999999975677778888999999999975 3343 3356666666654
Q ss_pred cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeec-cCCCcHHHHHHHHHcCCCC
Q 017916 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVF-RYKNTWPLCLELLRSGKID 328 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~~ 328 (364)
.++++|++||++|+.......+++++++|+++.+|.... ...........+++++.+.. ...+.++++++++.++.+.
T Consensus 232 ~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (344)
T cd08284 232 EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLD 311 (344)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCC
Confidence 256899999999977888999999999999999986542 22233334456777766542 2367899999999999985
Q ss_pred CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+.+.+.+.|++ +++++|++.++++.. ||+|++
T Consensus 312 ~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 312 LEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred hHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence 44456788888 999999999988877 999986
No 48
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.6e-41 Score=284.94 Aligned_cols=316 Identities=21% Similarity=0.288 Sum_probs=253.7
Q ss_pred ccccchhcceeEEEe----cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEE
Q 017916 10 EKEDGEEVNMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85 (364)
Q Consensus 10 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V 85 (364)
+.+.++...+++++. ..+.+++++.++|....++|+||..+++|||+|+..++|.|+.. +.+|.+.|+|++|+|
T Consensus 12 sa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~eV 89 (354)
T KOG0025|consen 12 SASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVGEV 89 (354)
T ss_pred cccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceEEE
Confidence 445566667788877 23799999999999888889999999999999999999988654 678999999999999
Q ss_pred EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh
Q 017916 86 EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE 165 (364)
Q Consensus 86 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~ 165 (364)
+.+|+++..|++||+|+.... ..|+|++|.+.+++.++++++.++.+.||++.
T Consensus 90 v~vGs~vkgfk~Gd~VIp~~a---------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~ 142 (354)
T KOG0025|consen 90 VAVGSNVKGFKPGDWVIPLSA---------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLS 142 (354)
T ss_pred EEecCCcCccCCCCeEeecCC---------------------------CCccceeeEeecccceEEcCCcCChhhhheec
Confidence 999999999999999997633 45999999999999999999999999999887
Q ss_pred -hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh---HHHHHHHcCCCeEEecCCCccc
Q 017916 166 -PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVAKELGADNIVKVSTNLQD 239 (364)
Q Consensus 166 -~~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~~~~~lg~~~~~~~~~~~~~ 239 (364)
..+|||.+|. .-++++||+|+..|| +++|++.+|+|+++|++.+-++...+. -.+.++.||+++++..+ +
T Consensus 143 VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTee----e 218 (354)
T KOG0025|consen 143 VNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEE----E 218 (354)
T ss_pred cCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHH----H
Confidence 8899999995 488999999999998 999999999999999987666644442 23445679999988522 2
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc-CCCCCccccchhhhhcCcEEEeeccC-------
Q 017916 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY------- 311 (364)
Q Consensus 240 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~------- 311 (364)
+.+.-.........++.+.|||+| +....++.+.|..||.++.+| |+..+...+...++++.+.++|++..
T Consensus 219 l~~~~~~k~~~~~~~prLalNcVG-Gksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~ 297 (354)
T KOG0025|consen 219 LRDRKMKKFKGDNPRPRLALNCVG-GKSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHK 297 (354)
T ss_pred hcchhhhhhhccCCCceEEEeccC-chhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccC
Confidence 221111111112457899999999 466678999999999999998 78888899999999999999999864
Q ss_pred -----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcC-CCceEEEEe
Q 017916 312 -----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 363 (364)
Q Consensus 312 -----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~ 363 (364)
.+.+.++.++++.|++. .......+| ++...|++...+. ...||.++.
T Consensus 298 ~pe~~~~~i~~~~~l~~~G~i~--~~~~e~v~L--~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 298 SPEERKEMIDELCDLYRRGKLK--APNCEKVPL--ADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred CcHHHHHHHHHHHHHHHcCeec--cccceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence 23567889999999994 333344567 7777887754333 444566664
No 49
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.8e-40 Score=304.98 Aligned_cols=329 Identities=30% Similarity=0.476 Sum_probs=264.4
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhccc--------CCccCCCCcccccceeEEEEEeC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--------ADFVVKEPMVIGHECAGVIEKVG 89 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~--------~~~~~~~p~~~G~e~~G~V~~vG 89 (364)
|+++++.++ .+++++.+.|++++++|+|||.++++|+.|+....|... .......|.++|+|++|+|+++|
T Consensus 1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08262 1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG 79 (341)
T ss_pred CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence 467777766 899999999999999999999999999999998876321 01122357899999999999999
Q ss_pred CCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhH
Q 017916 90 SEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 168 (364)
Q Consensus 90 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~ 168 (364)
+++++ |++||+|++++..+|..|+.|..+. .....|+|++|+.++.++++++|+++++++++++..++
T Consensus 80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~ 148 (341)
T cd08262 80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGL-----------SPEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA 148 (341)
T ss_pred CCCcCCCCCCCEEEecCCcCCCCChhhhCCC-----------CcCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence 99987 9999999999999999999993211 11256999999999999999999999988887656888
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcc--cHHHHHHH
Q 017916 169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ--DIAEEVEK 246 (364)
Q Consensus 169 ~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~i~~ 246 (364)
+||+++..+++++|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++++++++.... ++. .+..
T Consensus 149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~ 227 (341)
T cd08262 149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA 227 (341)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH
Confidence 9999887799999999999988999999999999999987888888999999999999988777543211 121 2222
Q ss_pred HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 325 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g 325 (364)
. ..++++|++||++|+...+..++++++++|+++.+|...............+++++.+.... .+.+.+++++++++
T Consensus 228 ~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 305 (341)
T cd08262 228 R--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEG 305 (341)
T ss_pred H--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcC
Confidence 2 23567999999999656788899999999999999854322222222224566776655444 45788999999999
Q ss_pred CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
.+.+.+.+.+.|++ +++++|++.++++...||+|++
T Consensus 306 ~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 306 KVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence 99655566788999 9999999999999999999974
No 50
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.8e-40 Score=309.27 Aligned_cols=330 Identities=31% Similarity=0.535 Sum_probs=269.3
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC----CccCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 017916 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA----DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102 (364)
Q Consensus 27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 102 (364)
..+++.+.|.|++++++|+|||.++++|+.|+....+.+.+ .....+|.++|+|++|+|+++|++++.|++||+|+
T Consensus 37 ~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 116 (384)
T cd08265 37 PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVT 116 (384)
T ss_pred CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEE
Confidence 47999999999999999999999999999999887632111 11135688999999999999999999999999999
Q ss_pred EcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC-------CCccchhhhhhhHHHHHHH-
Q 017916 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN-------VSLEEGAMCEPLSVGLHAC- 174 (364)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~-------~~~~~aa~~~~~~~a~~~l- 174 (364)
+.+..+|..|+.|+.+++++|.++...+. ..+|+|++|+.+++++++++|++ ++...|++..++++||+++
T Consensus 117 ~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~ 195 (384)
T cd08265 117 AEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLF 195 (384)
T ss_pred ECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHHH
Confidence 99999999999999999999998876553 24799999999999999999986 3455555556888999998
Q ss_pred HH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017916 175 RR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~ 252 (364)
.. .++++|++|||+|+|.+|++++|+|+.+|++.+++++.+++|.++++++|++.++++.+. ..++.+.++++. .+
T Consensus 196 ~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~--~g 273 (384)
T cd08265 196 IRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT--KG 273 (384)
T ss_pred hhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc--CC
Confidence 34 689999999999779999999999999999778888888889999999999888775432 236666666654 35
Q ss_pred CCccEEEECCCC-HHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCC
Q 017916 253 TGIDVSFDCAGF-NKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDV 329 (364)
Q Consensus 253 ~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~ 329 (364)
.++|+++|+.|. ...+..++++|+++|+++.+|.......+....+..+..++.+.... ...+.+++++++++.+.+
T Consensus 274 ~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~ 353 (384)
T cd08265 274 WGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDM 353 (384)
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCCh
Confidence 689999999996 34778899999999999999854333333444556667777776543 457999999999999854
Q ss_pred CCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
.+.+.+.|++ +++.+|++.+.++ ..||+++
T Consensus 354 ~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 354 TKIITARFPL--EGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence 3446788999 9999999997665 6788876
No 51
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=6.7e-40 Score=303.59 Aligned_cols=335 Identities=38% Similarity=0.662 Sum_probs=280.8
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|+++++..++.+.+++.+.|++.+++|+|||.++++|+.|+....|.+. ....|.++|+|++|+|+.+|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCC
Confidence 4677777778899999999999999999999999999999998876442 1345789999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-----eEECCCCCCccchhhhhhhHHHHH
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CFKLPDNVSLEEGAMCEPLSVGLH 172 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-----~~~lP~~~~~~~aa~~~~~~~a~~ 172 (364)
||+|++.++.+|.+|..|..++.++|....+++. ...|+|++|+.+++++ ++++|+++++.+|+++..+.+||+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~ 156 (343)
T cd08235 78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCIN 156 (343)
T ss_pred CCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHH
Confidence 9999999999999999999999999988765543 4579999999999999 999999999999887678889999
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+++..++++|++|||+|+|.+|++++|+|+..|++.++++++++++.+.++++|++++++++. .++.+.++... .+
T Consensus 157 ~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~ 232 (343)
T cd08235 157 AQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELT--DG 232 (343)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc--cCHHHHHHHHh--CC
Confidence 997778999999999987999999999999999975788888888888888999988776543 56766666553 25
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC--ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV 329 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~ 329 (364)
.++|++|||+++.......+++|+++|+++.++..... ..........+.+.+.+.... .+.+++++++++++.+.+
T Consensus 233 ~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~ 312 (343)
T cd08235 233 RGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDV 312 (343)
T ss_pred cCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCCh
Confidence 57999999999777889999999999999998743221 233334566677777766544 567889999999999854
Q ss_pred CCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
.+.+...|++ +++.+|++.+.++. .||+|++
T Consensus 313 ~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 313 KDLITHRFPL--EDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred HHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence 3456778888 99999999999998 9999975
No 52
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1e-39 Score=301.67 Aligned_cols=335 Identities=38% Similarity=0.643 Sum_probs=277.1
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|++++...+..+++.+.+.|++.++||+|+|.++++|+.|+....+.+.. ..+|.++|+|++|+|+.+|++++.|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCC
Confidence 46777777788999999999999999999999999999999988765422 245789999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 177 (364)
||+|++.+..+|..|..|...++++|.+....+ ....|+|++|+.++++ ++++|+++++++|+++..+.+++++++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~ 155 (337)
T cd08261 78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRA 155 (337)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhc
Confidence 999999888899999999999999996443322 2246999999999999 99999999999988777778888888778
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
++++|++|||+|+|.+|++++|+|+.+|++ ++++++++++.++++++|+++++++.. .++.+.++.+. .+.++|+
T Consensus 156 ~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~~~vd~ 230 (337)
T cd08261 156 GVTAGDTVLVVGAGPIGLGVIQVAKARGAR-VIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DGEGADV 230 (337)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CCCCCCE
Confidence 899999999998799999999999999995 677777889999999999988887654 45666666553 2457999
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEE
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHR 336 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~ 336 (364)
+|||+|+.+.+..++++|+++|+++.++............+..+.+++.+.... .+.+++++++++++.+.+.+.+...
T Consensus 231 vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~ 310 (337)
T cd08261 231 VIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHR 310 (337)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEE
Confidence 999998778889999999999999999854433333334455567777665333 5578899999999998542257788
Q ss_pred eeCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017916 337 FGFSQKEVEEAFETSARG-GTAIKVMFNL 364 (364)
Q Consensus 337 ~~~~~~~~~~a~~~~~~~-~~~gkvvv~~ 364 (364)
|++ +++.+|++.+.++ ...+|+|+++
T Consensus 311 ~~~--~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 311 FPF--EDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred eeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence 888 9999999999988 5889999875
No 53
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=5e-40 Score=301.43 Aligned_cols=318 Identities=31% Similarity=0.484 Sum_probs=268.0
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|+++++.++..+++++.+.|++.++||+|||.++++|+.|+....|.+ ..|.++|+|++|+|+++|++ +++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCC
Confidence 467778877889999999999999999999999999999999887643 25789999999999999988 789
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 177 (364)
||+|...+..+|.+|.+|+.+..++|.+....+....+|+|++|+.++.++++++|++++.++++.+.++++++.+++..
T Consensus 72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~ 151 (319)
T cd08242 72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQV 151 (319)
T ss_pred CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhc
Confidence 99999988888999999999999999887655543457999999999999999999999988887655566777777888
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
+++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++... ..+.++|+
T Consensus 152 ~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d~ 217 (319)
T cd08242 152 PITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFDV 217 (319)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCCE
Confidence 999999999998899999999999999996 7777788999999999999877664221 12568999
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 337 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~ 337 (364)
+|||+|+...+...+++|+++|+++..+.......+....+..++.++.+.... .+++++++++++++++.+.+.+.|
T Consensus 218 vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~ 295 (319)
T cd08242 218 VVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAVY 295 (319)
T ss_pred EEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEEE
Confidence 999999777889999999999999987643333344445566788888776543 388999999999986556688999
Q ss_pred eCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 338 GFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 338 ~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
++ +++++||+.++++. .+|++++
T Consensus 296 ~l--~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 296 PL--EEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred eH--HHHHHHHHHHhcCC-ceEEEeC
Confidence 99 99999999998775 5899986
No 54
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=5.4e-40 Score=306.34 Aligned_cols=333 Identities=30% Similarity=0.451 Sum_probs=272.8
Q ss_pred cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 17 ~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
.|+|+++.++ ..+++++.+.|.+.++||+|||.++++|+.|+....|.+. ...|.++|+|++|+|+++|+++.++
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08278 2 KTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTGL 77 (365)
T ss_pred ccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccC
Confidence 4678888863 6789999999999999999999999999999998877542 3468899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----------------------CCCCCcceeEEEecCCceEECC
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PPVHGSLANQVVHPADLCFKLP 153 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~v~~~~~~~~~lP 153 (364)
++||+|++.+. .|..|.+|..++.++|.+...... ....|+|++|+.+++++++++|
T Consensus 78 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 78 KPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 99999998764 799999999999999986542210 0125899999999999999999
Q ss_pred CCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEE
Q 017916 154 DNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 231 (364)
Q Consensus 154 ~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~ 231 (364)
+++++..++.+. .+.+|+.++ +...++++++|||+|+|++|++++|+|+++|++.+++++.+++|.++++++|++.++
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i 236 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVI 236 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence 999988887665 788899887 568899999999998899999999999999998789998999999999999998887
Q ss_pred ecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhhhcCcEEEeec
Q 017916 232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVF 309 (364)
Q Consensus 232 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~ 309 (364)
+++. .++.+.+++.. +.++|+++||+|++..+..++++++++|+++.+|... ....++...+..+++++.+..
T Consensus 237 ~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T cd08278 237 NPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVI 311 (365)
T ss_pred cCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEee
Confidence 7533 46666666553 5689999999997788899999999999999998542 223344444556788887764
Q ss_pred cC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 310 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 310 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
.. .+.+++++++++++.+.+. .+...|++ +++++|++.++++.. -|++++
T Consensus 312 ~~~~~~~~~~~~~~~~l~~g~l~~~-~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 312 EGDSVPQEFIPRLIELYRQGKFPFD-KLVTFYPF--EDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred cCCcChHHHHHHHHHHHHcCCCChH-HheEEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence 32 3467889999999998432 23457888 999999999988754 487764
No 55
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.2e-40 Score=305.10 Aligned_cols=337 Identities=28% Similarity=0.418 Sum_probs=277.6
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC---------CccCCCCcccccceeEEEEE
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---------DFVVKEPMVIGHECAGVIEK 87 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~---------~~~~~~p~~~G~e~~G~V~~ 87 (364)
|+++++..+ ..+++.+.|.|++.++||+||+.++++|+.|+....|.+.. .....+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 467766643 45889999999999999999999999999999988764310 00124568899999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-h
Q 017916 88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P 166 (364)
Q Consensus 88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~ 166 (364)
+|++++++++||+|++.+...|.+|.+|++++.++|......+. ...|+|++|+.++.++++++|+++++.+++.+. .
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~ 159 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence 99999999999999999999999999999999999988755543 367999999999999999999999999888664 7
Q ss_pred hHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 017916 167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245 (364)
Q Consensus 167 ~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~ 245 (364)
+.+||++++. ..++++++|||+|+|.+|++++|+|+++|++.+++++.++++.+.++++|++.+++.. ..++.+.+.
T Consensus 160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~ 237 (350)
T cd08240 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS--DPDAAKRII 237 (350)
T ss_pred hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC--CccHHHHHH
Confidence 8899999865 5556899999998899999999999999997788888899999999999998766643 345555555
Q ss_pred HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHc
Q 017916 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS 324 (364)
Q Consensus 246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 324 (364)
+.. ++++|++||++|+...+..++++|+++|+++.+|...............+++++.+.... .+.+.++++++++
T Consensus 238 ~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~ 314 (350)
T cd08240 238 KAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA 314 (350)
T ss_pred HHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence 543 337999999999778899999999999999999854433333444455688888887655 4678899999999
Q ss_pred CCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 325 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 325 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.+. +.....|++ +++++|++.+.++...||++++.
T Consensus 315 ~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 315 GKLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred CCCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEecC
Confidence 9984 446678888 99999999999998899999863
No 56
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=6e-40 Score=305.99 Aligned_cols=334 Identities=34% Similarity=0.538 Sum_probs=273.7
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++..+ ..+++.+.+.|++.+++|+|||.++++|+.|+....|.+. ..+|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence 578888765 6789999999999999999999999999999998876442 35678999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc------cc-------------CCCCCcceeEEEecCCceEECCCCCC
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF------AT-------------PPVHGSLANQVVHPADLCFKLPDNVS 157 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------------~~~~g~~~~~v~~~~~~~~~lP~~~~ 157 (364)
+||+|++.+..+|.+|.+|++++.++|.+..+. ++ ....|+|++|+.+++++++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 999999999999999999999999999876421 00 02469999999999999999999999
Q ss_pred ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916 158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235 (364)
Q Consensus 158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~ 235 (364)
+++++.+. .+.+||.++ +..+++++++|||+|+|.+|++++++|+.+|+++++++++++++.++++++|+++++++.
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~- 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS- 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC-
Confidence 98888776 778899887 568899999999997799999999999999997688888899999999999998777643
Q ss_pred CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeec----
Q 017916 236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF---- 309 (364)
Q Consensus 236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~---- 309 (364)
..++...++.+.. +.++|++||++++...+...+++|+++|+++.++.... ...+....+..+...+.+..
T Consensus 236 -~~~~~~~l~~~~~--~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (363)
T cd08279 236 -EDDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSA 312 (363)
T ss_pred -CccHHHHHHHHcC--CCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCc
Confidence 3466666665532 46799999999977888999999999999999975432 22334444444566555542
Q ss_pred cCCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEE
Q 017916 310 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361 (364)
Q Consensus 310 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 361 (364)
.....+++++++++++.+.+.+.+.+.|++ +++++|++.+++++..+.++
T Consensus 313 ~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 313 NPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI 362 (363)
T ss_pred CcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence 225678899999999998544457788888 99999999999887765555
No 57
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.9e-39 Score=298.20 Aligned_cols=331 Identities=37% Similarity=0.616 Sum_probs=277.5
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|+++++.+++.+++.+.+.|++.+++|+|||.++++|+.|+....|.+. ..+|.++|+|++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence 5678888888999999999999999999999999999999998877543 236889999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 177 (364)
||+|++.+...|+.|.+|..++.++|++....+. ...|+|++|+.++.++++++|+++++.+|+.+..+.+++++++.+
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 155 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL 155 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence 9999999888899999999999999998875432 356999999999999999999999998888667778889888778
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
++++|++|||+|+|.+|++++++|++.|+++++++++++++.+.++++|++.+++++. .++... ....++++|+
T Consensus 156 ~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~----~~~~~~~vd~ 229 (334)
T cd08234 156 GIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ----KEDNPYGFDV 229 (334)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH----HHhcCCCCcE
Confidence 9999999999988999999999999999976788888999999999999887766543 333333 1223568999
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEE
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTH 335 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~ 335 (364)
+|||+|+.......+++|+++|+++.+|.... ........+..+++++.+.......+++++++++++++.+.+.+.+
T Consensus 230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 309 (334)
T cd08234 230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH 309 (334)
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence 99999877888999999999999999985432 1222222334477888887666677899999999999865455678
Q ss_pred EeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 336 RFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 336 ~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
.|++ +++.+|++.+.+ ...||+++
T Consensus 310 ~~~~--~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 310 RLPL--EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EecH--HHHHHHHHHHhc-CCceEEEe
Confidence 8888 999999999998 78899986
No 58
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.5e-39 Score=299.96 Aligned_cols=334 Identities=28% Similarity=0.491 Sum_probs=274.7
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.+++.+++.+.|.|.+ +++||+||+.++++|+.|+....|.+. ...|.++|+|++|+|+++|+++..++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence 5788888888999999999985 899999999999999999988876542 24578999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCccchhhh------hhhH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC------EPLS 168 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~------~~~~ 168 (364)
+||+|++....+|..|.+|..++.+.|.+..+.+ ...+|+|++|+.++.+ +++++|+++++..+.+. ..+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 9999998666779999999999999998765444 3577999999999975 99999999987222211 3677
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916 169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 169 ~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
+|+++++.+++++|++|+|+|+|++|++++|+|++.|++.++++++++++.++++++|++.++++.. .++.+.+.+..
T Consensus 156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~~ 233 (345)
T cd08287 156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVRELT 233 (345)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHhc
Confidence 8999887788999999999888999999999999999987888888888999999999988887543 45556665543
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCC
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 327 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~ 327 (364)
.+.++|+++|++|++..+..++++++++|+++.++.......++......+++++.+.... .+.++++++++.++.+
T Consensus 234 --~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (345)
T cd08287 234 --GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRI 311 (345)
T ss_pred --CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCC
Confidence 2467999999999888899999999999999999855433333433456788888775443 5678999999999998
Q ss_pred CCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 328 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
.+.+.+.+.|++ +++++|++.+.+... .|++|+
T Consensus 312 ~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 312 NPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred CHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence 544456788888 999999999887654 499885
No 59
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3e-39 Score=299.23 Aligned_cols=333 Identities=39% Similarity=0.662 Sum_probs=275.4
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
|+|+++.....+.+++.+.|++.++||+||+.++++|+.|+....+.+ ....|.++|+|++|+|+.+|++++.|++
T Consensus 1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence 467777777789999999999999999999999999999998877643 2345789999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (364)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 177 (364)
||+|++++...|..|.+|..+....|++....+. ...|+|++|+.+++++++++|+++++++++++..+++||+++...
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~ 155 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA 155 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence 9999999888999999999999999987654442 367999999999999999999999999988777788999999878
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
+++++++|||+|+|.+|++++|+|+.+|++.+++++.++++.++++++|++.+++++. .. .+.++... .+.++|+
T Consensus 156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d~ 230 (343)
T cd08236 156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGADL 230 (343)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCCE
Confidence 8999999999987999999999999999975788888888889999999988777543 23 44454443 2457999
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc---cccchhhhhcCcEEEeeccC------CCcHHHHHHHHHcCCCC
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM---TVPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGKID 328 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~~ 328 (364)
+|||.|+...+..++++|+++|+++.+|...... .........+++++.+.... .+.++++.++++++.+.
T Consensus 231 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (343)
T cd08236 231 VIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIK 310 (343)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCC
Confidence 9999987788899999999999999998543321 11223345677777766432 45688899999999985
Q ss_pred CCCceEEEeeCChhhHHHHHHHHhc-CCCceEEEE
Q 017916 329 VKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMF 362 (364)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv 362 (364)
+.+.+.+.+++ ++++++++.+++ ....||+|+
T Consensus 311 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 311 VEPLITHRLPL--EDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred hHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence 44556788888 999999999998 677888875
No 60
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3.1e-39 Score=301.65 Aligned_cols=336 Identities=32% Similarity=0.525 Sum_probs=277.2
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC--
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT-- 94 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~-- 94 (364)
|+++++..+ ..+++.+.|.|.++++||+||+.++++|+.|+....+.+. ..+|.++|+|++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~ 76 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPY 76 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCC
Confidence 467777665 5688899999999999999999999999999998876442 356789999999999999999988
Q ss_pred -CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc---------------------CCCCCcceeEEEecCCceEEC
Q 017916 95 -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFKL 152 (364)
Q Consensus 95 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~v~~~~~~~~~l 152 (364)
|++||+|++.+..+|..|.+|..++.++|.+..+++. ....|+|++|+.++.++++++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 9999999998888999999999999999997642111 013699999999999999999
Q ss_pred CCCCCccchhhhh-hhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE
Q 017916 153 PDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI 230 (364)
Q Consensus 153 P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~ 230 (364)
|+++++.+++.+. .+.+||+++.. ..++++++|||+|+|.+|++++++|+++|++++++++.++++.+.++++|++.+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v 236 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT 236 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence 9999999988775 78899999854 678999999999779999999999999999768888888999999999999888
Q ss_pred EecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEee
Q 017916 231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGV 308 (364)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~ 308 (364)
++++ ..++.+.++... .+.++|++||++++.+....++++|+++|+++.++.... ...+....+..+++++.+.
T Consensus 237 ~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 237 VNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred ecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 7754 346666666553 256799999999965588899999999999999985432 1223334444678888775
Q ss_pred ccC--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 309 FRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 309 ~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
... .+.+++++++++++.+.+.+.+.+.|++ +++.+|++.++++...||+|+.
T Consensus 313 ~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 313 YGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence 443 3578899999999998544446788888 9999999999999889999974
No 61
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=4.7e-39 Score=298.17 Aligned_cols=335 Identities=31% Similarity=0.480 Sum_probs=277.0
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++... .++++.+.+.|.+.+++|+||+.++++|+.|+....|.+.. ..+|.++|+|++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCC
Confidence 467776643 35888999999999999999999999999999988875431 35588999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+||+|++.....|.+|.+|+.+..++|.++...+. ..+|+|++|+.+++. +++++|+++++++++.+. .+.+||++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 156 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRA 156 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHH
Confidence 99999986667899999999999999999753332 247999999999985 999999999998888665 78899999
Q ss_pred H-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 174 l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+ +.+++.++++|+|+|+|.+|++++++|+.+|+ .++++++++++.+.++++|++.+++++. ..++.+.++.+. +
T Consensus 157 l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~---~ 231 (345)
T cd08260 157 LVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT---G 231 (345)
T ss_pred HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---C
Confidence 8 56888999999999999999999999999999 5677778888899999999988877543 245666666553 2
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC---ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE---MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 328 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 328 (364)
+++|++|||+|+.......+++|+++|+++.+|..... ...+...+..+++++.+.... ...+++++++++++++.
T Consensus 232 ~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~ 311 (345)
T cd08260 232 GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLD 311 (345)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCC
Confidence 38999999999777888999999999999999854321 233444455778888886544 56788999999999985
Q ss_pred CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+.+.+...+++ +++++|++.++.+...||+|++
T Consensus 312 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 312 PEPLVGRTISL--DEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred hhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence 44446788888 9999999999999999999875
No 62
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=9.8e-40 Score=300.06 Aligned_cols=305 Identities=21% Similarity=0.269 Sum_probs=245.7
Q ss_pred ceeEEEecC------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916 18 NMAAWLLGV------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91 (364)
Q Consensus 18 ~~~~~~~~~------~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 91 (364)
|+++++.++ +.+++.+.|.|.++++||+|||.++++|+.|+....|.+.. ...+|.++|+|++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCC
Confidence 456666643 36888899999999999999999999999999988775422 1356899999999999999999
Q ss_pred CCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916 92 VKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 169 (364)
Q Consensus 92 v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~ 169 (364)
+++ |++||+|++.+. .+|+|++|+.+++++++++|+++++++|+.+. .+.+
T Consensus 79 v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~t 131 (324)
T cd08291 79 PLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLT 131 (324)
T ss_pred ccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHH
Confidence 996 999999987521 14999999999999999999999998887543 6667
Q ss_pred HHHHHHHcCCCCCCEEEEE-cC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916 170 GLHACRRANIGPETNVLIM-GA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 170 a~~~l~~~~~~~g~~VLI~-Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
||.+++..+. ++++++|+ |+ |++|++++|+|+.+|+ .+++++.++++.++++++|+++++++.. .++.+.++++
T Consensus 132 a~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~~ 207 (324)
T cd08291 132 ALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKEL 207 (324)
T ss_pred HHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHHH
Confidence 8766655655 56667665 55 9999999999999999 5777888999999999999999888543 5777777665
Q ss_pred HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cc-cccchhhhhcCcEEEeeccC-------CCcHHHH
Q 017916 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EM-TVPLTPAAVREVDVVGVFRY-------KNTWPLC 318 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 318 (364)
.. +.++|++||++|+ ......+++++++|+++.+|.... .. .++...+..+++++.+.... .+.++++
T Consensus 208 ~~--~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (324)
T cd08291 208 IA--KLNATIFFDAVGG-GLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKL 284 (324)
T ss_pred hC--CCCCcEEEECCCc-HHHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHH
Confidence 42 5689999999995 556778999999999999985322 22 23345567788888887543 2357788
Q ss_pred HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+++++ +++ ++.+.++|+| +++.+|++.++++...||+++.
T Consensus 285 ~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 285 KKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence 88887 776 7788899999 9999999999999999999873
No 63
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.5e-39 Score=305.18 Aligned_cols=343 Identities=22% Similarity=0.254 Sum_probs=273.8
Q ss_pred chhcceeEEEec-----C-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCC------c-cCCCC-ccccc
Q 017916 14 GEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD------F-VVKEP-MVIGH 79 (364)
Q Consensus 14 ~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~------~-~~~~p-~~~G~ 79 (364)
++.+|+|.++.. + +.+++.+.|.|.+.+++|+||+.++++|..|.....+..... + ....| .++|+
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 445678887732 2 579999999999999999999999999999887665432110 0 01234 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcc
Q 017916 80 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159 (364)
Q Consensus 80 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~ 159 (364)
|++|+|+++|++++.+++||+|++.+...|++|++|+.+++.+|..+...+....+|+|++|+.+++++++++|++++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 99999999999999999999999999999999999999999999876555444567999999999999999999999998
Q ss_pred chhhhh-hhHHHHHHHH---HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916 160 EGAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (364)
Q Consensus 160 ~aa~~~-~~~~a~~~l~---~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~ 234 (364)
+++.+. .+.+||+++. .+++++|++|||+|+ |.+|++++++|+.+|++ +++++.++++.++++++|++.+++++
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~ 242 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRN 242 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCC
Confidence 888665 8889999984 377899999999998 99999999999999995 56666788899999999999888764
Q ss_pred CCc--------------------ccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccc
Q 017916 235 TNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTV 293 (364)
Q Consensus 235 ~~~--------------------~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~ 293 (364)
... ..+.+.+.++. .++++|++|||+| ...+...+++++++|+++.+|.... ....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 319 (398)
T TIGR01751 243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELT--GGEDPDIVFEHPG-RATFPTSVFVCRRGGMVVICGGTTGYNHDY 319 (398)
T ss_pred CcchhhccccccccccchhhhcchhHHHHHHHHc--CCCCceEEEECCc-HHHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence 310 11233333332 2467999999999 5778899999999999999985432 2334
Q ss_pred cchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 294 PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+...+..++.++.+.... .+.+++++++++++++ .+.+.+.|++ ++++++++.+.++...||+++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 445555677777766533 3457889999999988 4557788888 99999999999999999999874
No 64
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.8e-39 Score=297.01 Aligned_cols=337 Identities=32% Similarity=0.551 Sum_probs=271.2
Q ss_pred ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|++++...++ .+++.+.+.|.+.++|++|||.++++|+.|+..+.+..........|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 4566766554 699999999999999999999999999999887544211111134577899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~ 176 (364)
+||+|++.+..+|..|.+|..+.+|+|....+.+ ....|+|++|+.+++++++++|++++.+.++++..+.++++++.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~- 158 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG-VDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL- 158 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccceEe-ccCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-
Confidence 9999999988999999999999999998765444 34579999999999999999999999866666668888888775
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
...++|++|||+|+|.+|++++|+|+++|...+++++++++|.++++++|+++++++. ..++. .++++. .++++|
T Consensus 159 ~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~--~~~~vd 233 (341)
T cd05281 159 AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT--DGTGVD 233 (341)
T ss_pred hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc--CCCCCC
Confidence 4457899999988899999999999999986677778888999999999998776643 34555 565543 256899
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch-hhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCce
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLV 333 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~ 333 (364)
++|||+|+.+....++++|+++|+++.++........... ....+++.+.+.... .+.+.++++++.++.+.+.+.+
T Consensus 234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 313 (341)
T cd05281 234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVI 313 (341)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHhe
Confidence 9999999888889999999999999999854332222222 255566676665432 4567889999999998655667
Q ss_pred EEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 334 THRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
...+++ +++++|++.+.++. .||++++.
T Consensus 314 ~~~~~~--~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 314 THKLPL--EDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred EEEecH--HHHHHHHHHHhcCC-CceEEecC
Confidence 788888 99999999999988 99999863
No 65
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=4e-39 Score=297.54 Aligned_cols=320 Identities=26% Similarity=0.422 Sum_probs=267.6
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEE-Ec
Q 017916 26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA-LE 104 (364)
Q Consensus 26 ~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~ 104 (364)
..++++.+.+.|++.++||+|||.++++|+.|+....|.+. ...+|.++|+|++|+|+++|+++++|++||+|+ ..
T Consensus 9 ~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 85 (337)
T cd05283 9 SGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGC 85 (337)
T ss_pred CCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCCCEEEEec
Confidence 37899999999999999999999999999999998887542 235688999999999999999999999999997 44
Q ss_pred CCcCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHHc
Q 017916 105 PGISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRA 177 (364)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~ 177 (364)
....|.+|.+|+.++.++|.++.++. .....|+|++|+.++.++++++|+++++++++.+. .+.+||++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~ 165 (337)
T cd05283 86 QVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRN 165 (337)
T ss_pred CCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhc
Confidence 55689999999999999999876542 12346999999999999999999999998888654 778999999877
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.+++|++++|.|+|.+|++++++|+.+|+ .+++++.++++.++++++|++.+++... .++. +. .++++|+
T Consensus 166 ~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~~----~~~~~d~ 235 (337)
T cd05283 166 GVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---KK----AAGSLDL 235 (337)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---hh----ccCCceE
Confidence 79999999998889999999999999999 6788888888999999999888776432 2221 11 2468999
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEE
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHR 336 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~ 336 (364)
+|||+|.......++++|+++|+++.+|.......++...+..+++++.+.... .+.+++++++++++++ .+.+ +.
T Consensus 236 v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~~-~~ 312 (337)
T cd05283 236 IIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGI--KPWV-EV 312 (337)
T ss_pred EEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCC--ccce-EE
Confidence 999999765678999999999999999865433344445556788998887654 5678899999999998 4444 77
Q ss_pred eeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 337 FGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 337 ~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
|++ +++++||+.++++...||+|++
T Consensus 313 ~~~--~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 313 IPM--DGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred EEH--HHHHHHHHHHHcCCCcceEeeC
Confidence 888 9999999999999999999875
No 66
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=5.3e-39 Score=297.17 Aligned_cols=329 Identities=33% Similarity=0.603 Sum_probs=268.4
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (364)
Q Consensus 27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (364)
..+++.+.|.|.++++||+|||.++++|+.|+.++.+..........|.++|+|++|+|+++|+++++|++||+|++.++
T Consensus 9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 88 (340)
T TIGR00692 9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH 88 (340)
T ss_pred CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence 56888899999999999999999999999999876543111111345778999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEE
Q 017916 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL 186 (364)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VL 186 (364)
..|..|..|..+..++|.+..+++ ....|+|++|+.++++.++++|+++++..|+....+.++++++ ....++|++|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl 166 (340)
T TIGR00692 89 IVCGKCYACRRGQYHVCQNTKIFG-VDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL 166 (340)
T ss_pred CCCCCChhhhCcChhhCcCcceEe-ecCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence 999999999999999999976553 2357999999999999999999999987666666788888876 34568999999
Q ss_pred EEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHH
Q 017916 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266 (364)
Q Consensus 187 I~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~ 266 (364)
|+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++.. .++.+.+.++. .++++|++|||+|+.+
T Consensus 167 I~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~~g~~~ 242 (340)
T TIGR00692 167 VTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEMSGAPK 242 (340)
T ss_pred EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEECCCCHH
Confidence 9877999999999999999975777788889999999999987776533 56666666553 2567999999999778
Q ss_pred HHHHHHHhcccCCEEEEEcCCCCCccccch-hhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhh
Q 017916 267 TMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 343 (364)
Q Consensus 267 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 343 (364)
.+...+++|+++|+++.+|........... .+..+.+++.+.... .+.+.+++++++++++.+.+.+.+.|++ ++
T Consensus 243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~ 320 (340)
T TIGR00692 243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DK 320 (340)
T ss_pred HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeH--HH
Confidence 889999999999999999864332222233 456677777665432 3457889999999998644567788888 99
Q ss_pred HHHHHHHHhcCCCceEEEEeC
Q 017916 344 VEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 344 ~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.++++.++++. .||+|+++
T Consensus 321 ~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 321 FEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred HHHHHHHHhcCC-CceEEEeC
Confidence 999999998886 49999975
No 67
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.3e-38 Score=294.69 Aligned_cols=334 Identities=30% Similarity=0.453 Sum_probs=278.2
Q ss_pred ceeEEEecCC--ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 18 NMAAWLLGVN--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 18 ~~~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
|+++++..++ .+++.+.+.|.+.+++|+||+.++++|+.|+.+..|.+... ...|.++|+|++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~ 78 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGL 78 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCC
Confidence 5678877654 89999999999999999999999999999998887654321 3457789999999999999999999
Q ss_pred CCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 96 VPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 96 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
++||+|++.+ ...|..|.+|+.++..+|.+....+. ...|+|++|+.+++++++++|+++++.+++.+. .+.+||++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~ 157 (341)
T cd08297 79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA 157 (341)
T ss_pred CCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHH
Confidence 9999999876 46699999999999999988765543 357999999999999999999999998888654 78899999
Q ss_pred HHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+...+++++++|||+|+ +.+|++++++|+++|+ .+++++.++++.+.++++|++.++++.. .++.+.+.++. .+
T Consensus 158 ~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~~ 232 (341)
T cd08297 158 LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--GG 232 (341)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--cC
Confidence 87778999999999997 7899999999999999 5777778888989989999988877543 36666666553 25
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK 330 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~ 330 (364)
+++|++||+.++.+....++++++++|+++.+|..... ..+.......+++++.+.... .+.+++++++++++++ .
T Consensus 233 ~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~ 310 (341)
T cd08297 233 GGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKV--K 310 (341)
T ss_pred CCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCC--c
Confidence 68999999888788999999999999999999854332 233334455788888875543 4678999999999998 3
Q ss_pred CceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 331 PLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 331 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.+ ..|++ ++++++++.+..+...||+++++
T Consensus 311 ~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 311 PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 433 66888 99999999999999999999875
No 68
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-39 Score=297.98 Aligned_cols=295 Identities=18% Similarity=0.204 Sum_probs=237.2
Q ss_pred CCceEEEEe---cCC-CCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCccccc--ceeEEEEEeCCCCCCCCCCC
Q 017916 26 VNTLKIQPF---ELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH--ECAGVIEKVGSEVKTLVPGD 99 (364)
Q Consensus 26 ~~~~~~~~~---~~p-~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~--e~~G~V~~vG~~v~~~~~Gd 99 (364)
++.|++.+. +.| ++++|||||||.++++||.|+..+.+.+. ....|+++|+ |++|+|..+|++++.|++||
T Consensus 24 ~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd 100 (348)
T PLN03154 24 ETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGD 100 (348)
T ss_pred cccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCC
Confidence 367888884 555 35899999999999999998765433111 1235889997 88999999999999999999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--eEE--CCCCCCcc-chhhhh-hhHHHHHH
Q 017916 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK--LPDNVSLE-EGAMCE-PLSVGLHA 173 (364)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~--lP~~~~~~-~aa~~~-~~~~a~~~ 173 (364)
+|++. |+|+||+.++++. +++ +|++++++ +|+.++ .+.|||++
T Consensus 101 ~V~~~-------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~a 149 (348)
T PLN03154 101 LISGI-------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAG 149 (348)
T ss_pred EEEec-------------------------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHH
Confidence 99864 7899999999853 544 58999886 565554 88999999
Q ss_pred H-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 174 l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
+ +.+++++|++|||+|+ |++|++++|+|+++|+ .++++++++++.++++ ++|++.++++... .++.+.+++..
T Consensus 150 l~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~-- 225 (348)
T PLN03154 150 FYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEE-PDLDAALKRYF-- 225 (348)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCc-ccHHHHHHHHC--
Confidence 8 4588999999999998 9999999999999999 5778888889999887 7999999886431 35666666543
Q ss_pred cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cc-----cccchhhhhcCcEEEeeccC------CCcHHHH
Q 017916 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EM-----TVPLTPAAVREVDVVGVFRY------KNTWPLC 318 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 318 (364)
++++|++|||+| ...+..++++++++|+++.+|.... .. ..+...++.+++++.|.+.. .+.++++
T Consensus 226 -~~gvD~v~d~vG-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~ 303 (348)
T PLN03154 226 -PEGIDIYFDNVG-GDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENV 303 (348)
T ss_pred -CCCcEEEEECCC-HHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHH
Confidence 458999999999 5788999999999999999985432 11 11334567788888887543 3457889
Q ss_pred HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++++++|++ ++.+...|+| +++++|++.++++...||+|+++
T Consensus 304 ~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 304 SRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred HHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 999999999 5667778889 99999999999999999999974
No 69
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.3e-38 Score=298.01 Aligned_cols=334 Identities=27% Similarity=0.436 Sum_probs=269.3
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.++..+++.+.|+|++ +++||+|||.++++|+.|+....|.+. ...|.++|+|++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCC
Confidence 3567777788999999999996 799999999999999999998877542 34688999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccc---------cccCCCCCcceeEEEecCC--ceEECCCCCCccc---hh
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHPAD--LCFKLPDNVSLEE---GA 162 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~---aa 162 (364)
+||+|++.+..+|..|..|..++.++|.+..+ ......+|+|++|+.++.+ +++++|+++++++ ++
T Consensus 77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a 156 (375)
T cd08282 77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL 156 (375)
T ss_pred CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence 99999998888999999999999998875321 1112346999999999976 9999999999883 44
Q ss_pred hh-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916 163 MC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241 (364)
Q Consensus 163 ~~-~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 241 (364)
.+ ..+.+||+++..+++++|++|||+|+|.+|++++|+|+++|+..+++++.++++.++++++|+. .+++. .+++.
T Consensus 157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~--~~~~~ 233 (375)
T cd08282 157 MLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS--DGDPV 233 (375)
T ss_pred eecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--cccHH
Confidence 44 4788999999778899999999988899999999999999986677788899999999999984 44432 35666
Q ss_pred HHHHHHHHHcCCCccEEEECCCCH-----------HHHHHHHHhcccCCEEEEEcCCCCC-------------ccccchh
Q 017916 242 EEVEKIQKAMGTGIDVSFDCAGFN-----------KTMSTALSATRAGGKVCLVGMGHHE-------------MTVPLTP 297 (364)
Q Consensus 242 ~~i~~~~~~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~~ 297 (364)
+.++++. ++++|++|||+|.. ..+..++++++++|+++.+|..... ..+....
T Consensus 234 ~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (375)
T cd08282 234 EQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGL 310 (375)
T ss_pred HHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHH
Confidence 6666553 35799999999854 2578999999999999887743211 1223344
Q ss_pred hhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 298 AAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 298 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+..++..+.+.... .+.+.+++++++++++.+...+.+.|++ +++++|++.+.++. .+|+|++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 311 LWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred HHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence 55566666655443 5678889999999999543357899999 99999999999888 99999863
No 70
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-39 Score=295.96 Aligned_cols=327 Identities=26% Similarity=0.440 Sum_probs=270.4
Q ss_pred ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.++. .+++.+.|.|.+.++||+||+.++++|+.|+....|... ...+|.++|+|++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP---RMKYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC---CCCCCeeccccceEEEEEeCCCCccCC
Confidence 5678878765 499999999999999999999999999999987776432 135578999999999999999998999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~ 175 (364)
+||+|++.+..+|..|.+|..++.++|....+.+. ..+|+|++|+.++.++++++|+++++.+++.+. .+.+||+++.
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~ 156 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR 156 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence 99999999888999999999999999998776553 457999999999999999999999988888665 8889999986
Q ss_pred HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 176 ~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
..+++++++|||+|+ |.+|++++++|+.+|+ .++++++++++.+.++++ ++.+++++ ++.+.++++ + +
T Consensus 157 ~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~----~-~ 225 (334)
T PRK13771 157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI----G-G 225 (334)
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc----C-C
Confidence 668899999999998 9999999999999999 467777888888888888 66555432 344444432 2 6
Q ss_pred ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc--cccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCC
Q 017916 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM--TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP 331 (364)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~ 331 (364)
+|++|||+|+ .....++++|+++|+++.+|...... .........+++++.+.... .+.+++++++++++.+ .+
T Consensus 226 ~d~~ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~ 302 (334)
T PRK13771 226 ADIVIETVGT-PTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKI--KP 302 (334)
T ss_pred CcEEEEcCCh-HHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCC--cc
Confidence 9999999995 67789999999999999998543221 12333345677888776433 5678899999999998 45
Q ss_pred ceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 332 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.+.+.|++ +++++|++.++++...||++++.
T Consensus 303 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 303 VIGAEVSL--SEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred eEeeeEcH--HHHHHHHHHHHcCCCcceEEEec
Confidence 57788899 99999999999888899999863
No 71
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.5e-38 Score=293.95 Aligned_cols=331 Identities=26% Similarity=0.430 Sum_probs=269.8
Q ss_pred ceeEEEecCCceE-EEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLGVNTLK-IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~~~~~~-~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++..++... +++.|.|.+.++||+|||.++++|+.|+....|... ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence 5778888665544 889999999999999999999999999988876432 12377999999999999999999999
Q ss_pred CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916 97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (364)
Q Consensus 97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l 174 (364)
+||+|++.+. .+|..|.+|..+..++|.+....+ ...+|+|++|+.++.++++++|+++++.+++.+. .+.+||+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~ 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAG-YTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccC-ccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence 9999997554 569999999999999998765433 2357999999999999999999999998888665 778999999
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
+.+++++|++|||+|+|++|++++++|+. .|+ .++++++++++.++++++|++.++++.. ..++.+.+++.. +
T Consensus 156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~---~- 229 (338)
T PRK09422 156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKT---G- 229 (338)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhc---C-
Confidence 77889999999999999999999999998 599 5788888999999999999988776532 134555555442 3
Q ss_pred CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL 332 (364)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 332 (364)
++|++|.+.++++.+..++++++++|+++.+|...............+...+.+.... .+.+++++++++++++ .+.
T Consensus 230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~ 307 (338)
T PRK09422 230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV--VPK 307 (338)
T ss_pred CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC--Ccc
Confidence 6886555555588999999999999999999864433344444566677888776543 5678899999999988 444
Q ss_pred eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+ ..+++ +++++|++.+.++...||+++++
T Consensus 308 v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 308 V-QLRPL--EDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred E-EEEcH--HHHHHHHHHHHcCCccceEEEec
Confidence 4 45788 99999999999999999999864
No 72
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.3e-38 Score=290.83 Aligned_cols=333 Identities=32% Similarity=0.550 Sum_probs=275.9
Q ss_pred ceeEEEecCC-c-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 18 NMAAWLLGVN-T-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 18 ~~~~~~~~~~-~-~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
|+++++.... . +.+.+.+.|.+.+++|+|||.++++|+.|+....|.+. ....+|.++|+|++|+|+.+|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~~~~g~~~~G~v~~~G~~v~~~ 78 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP--TLTKLPLTLGHEIAGTVVEVGAGVTNF 78 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc--ccCCCCEeccccccEEEEEECCCCccC
Confidence 4677777543 3 67788888999999999999999999999998877543 123567899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC 174 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l 174 (364)
++||+|++.+..+|..|.+|+.++.++|......+. ...|+|++|+.++.++++++|+++++.+++.+ ..+.+||+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l 157 (338)
T cd08254 79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV 157 (338)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 999999998888999999999999999976554433 45799999999999999999999999888866 4889999998
Q ss_pred H-HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916 175 R-RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 175 ~-~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
. ..+++++++|||.|+|.+|++++++|+.+|++ +++++.++++.+.++++|++.+++... .++.+.+ . ...++
T Consensus 158 ~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~--~~~~~ 231 (338)
T cd08254 158 VRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK-A--AGLGG 231 (338)
T ss_pred HhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH-H--HhcCC
Confidence 5 47799999999987799999999999999994 788888899999999999987766432 3444444 2 22356
Q ss_pred CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL 332 (364)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 332 (364)
++|++|||+|..+....++++|+++|+++.++............+..++.++.+.... .+.+..++++++++.+. +.
T Consensus 232 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~~ 309 (338)
T cd08254 232 GFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLD--PQ 309 (338)
T ss_pred CceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCc--cc
Confidence 8999999998788899999999999999999865444444455667778888876544 56788999999999984 33
Q ss_pred eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.+.|++ +++.++++.+.++...||+++++
T Consensus 310 -~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 310 -VETRPL--DEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 577888 99999999999999999999874
No 73
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.9e-38 Score=293.23 Aligned_cols=296 Identities=20% Similarity=0.201 Sum_probs=236.7
Q ss_pred CCceEEEEecC----CCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccce--eEEEEEeCCCCCCCCCCC
Q 017916 26 VNTLKIQPFEL----PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC--AGVIEKVGSEVKTLVPGD 99 (364)
Q Consensus 26 ~~~~~~~~~~~----p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd 99 (364)
++.|++++.++ |+++++||||||+++++||.|+....|.+.. ....|+++|+++ .|.+..+|++++.|++||
T Consensus 18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd 95 (338)
T cd08295 18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGD 95 (338)
T ss_pred ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence 46899999887 7899999999999999999999988774321 124578888754 455555788888999999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECC-CCCCcc-chhhh-hhhHHHHHHH-
Q 017916 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLP-DNVSLE-EGAMC-EPLSVGLHAC- 174 (364)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~lP-~~~~~~-~aa~~-~~~~~a~~~l- 174 (364)
+|+++ |+|+||+++++ .+++++| +++++. +++.+ .++.|||+++
T Consensus 96 ~V~~~-------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~ 144 (338)
T cd08295 96 LVWGF-------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFY 144 (338)
T ss_pred EEEec-------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHH
Confidence 99864 78999999999 7999995 568775 56555 4889999999
Q ss_pred HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+.+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|+++++++... .++.+.++... +
T Consensus 145 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~---~ 219 (338)
T cd08295 145 EVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEE-PDLDAALKRYF---P 219 (338)
T ss_pred HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCc-ccHHHHHHHhC---C
Confidence 4588999999999998 9999999999999999 57777788999999988 999988875432 36666665543 4
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-c-----cccchhhhhcCcEEEeeccC------CCcHHHHHH
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-M-----TVPLTPAAVREVDVVGVFRY------KNTWPLCLE 320 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 320 (364)
.++|++||++| ...+..++++|+++|+++.+|..... . ..+......+++++.++... .+.++++++
T Consensus 220 ~gvd~v~d~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 298 (338)
T cd08295 220 NGIDIYFDNVG-GKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSG 298 (338)
T ss_pred CCcEEEEECCC-HHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHH
Confidence 68999999999 47889999999999999999853221 1 12234566777888775432 234788899
Q ss_pred HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++.+|++ ++.+...|++ +++++|++.++++...||+|+++
T Consensus 299 l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 299 YIKEGKL--KYVEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHCCCe--EceeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence 9999998 4445566888 99999999999999999999975
No 74
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=9.4e-38 Score=287.75 Aligned_cols=327 Identities=32% Similarity=0.535 Sum_probs=268.9
Q ss_pred ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 18 ~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++++.. ++.+.+.+.|.|.+.+++|+|+|+++++|+.|+....|.... ...|.++|+|++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~ 77 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFK 77 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCC
Confidence 46777765 678999999999999999999999999999999988764321 34578999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~ 175 (364)
+||+|++++...|..|.+|..+..++|.+....+ ....|+|++|+.++.++++++|+++++++++.+. .+.+||++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~ 156 (332)
T cd08259 78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK 156 (332)
T ss_pred CCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence 9999999998999999999999999999874433 4567999999999999999999999998888665 8889999997
Q ss_pred HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 176 ~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
.+++++++++||+|+ |.+|++++++++..|++ ++.+.+++++.+.+++++.+.+++.+ ++.+.+... .+
T Consensus 157 ~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~ 226 (332)
T cd08259 157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----GG 226 (332)
T ss_pred HhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc-----cC
Confidence 688999999999998 99999999999999995 66666788888888888887666532 144444433 27
Q ss_pred ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL 332 (364)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 332 (364)
+|+++|++|. ......+++++++|+++.++...... .........++..+.+.... .+.+++++++++++.+ .+.
T Consensus 227 ~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~ 303 (332)
T cd08259 227 ADVVIELVGS-PTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI--KPV 303 (332)
T ss_pred CCEEEECCCh-HHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC--ccc
Confidence 9999999994 56788999999999999997533221 12223334567776665433 5678899999999988 556
Q ss_pred eEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+.+.|++ +++++|++.+.++...||++++
T Consensus 304 ~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 304 IDRVVSL--EDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred eeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence 7788999 9999999999999889999874
No 75
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.3e-38 Score=291.14 Aligned_cols=289 Identities=19% Similarity=0.239 Sum_probs=232.3
Q ss_pred cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE 104 (364)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
+++.+++.+.+.|++++|||+|||.++++||.++. |.+. ....|.++|.|++|+|+++|+ .|++||+|++.
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~ 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence 56899999999999999999999999999996544 3221 123478999999999999774 59999999864
Q ss_pred CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC----CCCCCccch-hhh-hhhHHHHHHH-HHc
Q 017916 105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL----PDNVSLEEG-AMC-EPLSVGLHAC-RRA 177 (364)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~l----P~~~~~~~a-a~~-~~~~~a~~~l-~~~ 177 (364)
++|++|+.++.+++.++ |+++++++| +++ .++.|||+++ +.+
T Consensus 86 -------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~ 134 (325)
T TIGR02825 86 -------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC 134 (325)
T ss_pred -------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence 56899999999998888 889998886 445 4889999998 568
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.++++... .++.+.++.. .++++|
T Consensus 135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvd 209 (325)
T TIGR02825 135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYD 209 (325)
T ss_pred CCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeE
Confidence 8999999999996 9999999999999999 57777788999999999999998886532 2444444443 246899
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-----Ccc--ccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-----EMT--VPLTPAAVREVDVVGVFRY-------KNTWPLCLELL 322 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l 322 (364)
++||++| .+.+..++++++++|+++.+|.... ... .....+..+.+++.++... .+.++++++++
T Consensus 210 vv~d~~G-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 288 (325)
T TIGR02825 210 CYFDNVG-GEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWV 288 (325)
T ss_pred EEEECCC-HHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHH
Confidence 9999999 4677999999999999999985321 111 1233456677887776532 34678899999
Q ss_pred HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
++|++. +.+...|++ +++.+|++.++++...||+|++
T Consensus 289 ~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 289 LEGKIQ--YKEYVIEGF--ENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HCCCcc--cceeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence 999984 445567888 9999999999999999999974
No 76
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.6e-38 Score=293.22 Aligned_cols=299 Identities=20% Similarity=0.251 Sum_probs=228.7
Q ss_pred CCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916 26 VNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE 104 (364)
Q Consensus 26 ~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
++.+++.+.+.|++ +++||+|||+++||||.|+..........+...+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 47899999999987 49999999999999999864332110001123567899999999999999999999999999853
Q ss_pred CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc-----hhhhhhhHHHHHHH-HHcC
Q 017916 105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGLHAC-RRAN 178 (364)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~-----aa~~~~~~~a~~~l-~~~~ 178 (364)
.++|+||+++++++++++|+++++.+ ++...++.+||+++ +.++
T Consensus 100 ------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~ 149 (345)
T cd08293 100 ------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGH 149 (345)
T ss_pred ------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhcc
Confidence 15799999999999999999864432 23334788999998 4577
Q ss_pred CCCC--CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 179 IGPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 179 ~~~g--~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
+++| ++|||+|+ |++|++++|+|+++|+..|+++++++++.+++++ +|+++++++.. .++.+.++++. +++
T Consensus 150 ~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~---~~g 224 (345)
T cd08293 150 ITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELC---PEG 224 (345)
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHC---CCC
Confidence 8877 99999998 9999999999999999667888888889888876 99999887643 57777777653 468
Q ss_pred ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC---Ccc--ccc----hhhh-hcCcEEEeecc--C----CCcHHHH
Q 017916 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH---EMT--VPL----TPAA-VREVDVVGVFR--Y----KNTWPLC 318 (364)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~--~~~----~~~~-~~~~~~~~~~~--~----~~~~~~~ 318 (364)
+|++||++|+ ..+..++++|+++|+++.+|.... +.. ... ..+. .+.+....... . .+.++++
T Consensus 225 vd~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (345)
T cd08293 225 VDVYFDNVGG-EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQL 303 (345)
T ss_pred ceEEEECCCc-HHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHH
Confidence 9999999995 567899999999999999984211 111 111 1111 23333322211 1 2346778
Q ss_pred HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++++++++. +.....|++ +++++|++.++++...||+|+++
T Consensus 304 ~~l~~~g~i~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 304 SQWVKEGKLK--VKETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHCCCcc--ceeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence 8999999984 444455678 99999999999999999999975
No 77
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=8.1e-39 Score=287.61 Aligned_cols=260 Identities=25% Similarity=0.405 Sum_probs=219.5
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCCcceeEEE
Q 017916 76 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV 143 (364)
Q Consensus 76 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~v~ 143 (364)
++|||++|+|+++|++|+ +|++||||+..+..+|..|.+|+.++.++|.+..+++.. ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 899999999988889999999999999999987665432 24699999999
Q ss_pred ecCC-ceEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHH
Q 017916 144 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 221 (364)
Q Consensus 144 ~~~~-~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~ 221 (364)
++++ +++++|++++++.++.+. .+.++|++++.....+|++|||+|+|++|++++|+|+.+|+++|++++.+++|.++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 9997 799999999999888765 77889999987777899999999999999999999999999768888889999999
Q ss_pred HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhh
Q 017916 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAA 299 (364)
Q Consensus 222 ~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~ 299 (364)
++++|++.++++.. ..+.++++. .+.++|++||++|++..++.++++++++|+++.+|... ....++...++
T Consensus 161 a~~~Ga~~~i~~~~----~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~ 234 (280)
T TIGR03366 161 ALSFGATALAEPEV----LAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV 234 (280)
T ss_pred HHHcCCcEecCchh----hHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence 99999988776422 233344332 35689999999998888999999999999999999542 23455666788
Q ss_pred hcCcEEEeeccC-CCcHHHHHHHHHcC--CCCCCCceEEEeeCChhh
Q 017916 300 VREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKE 343 (364)
Q Consensus 300 ~~~~~~~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~~~~~~ 343 (364)
.+++++.++... ...++++++++.++ ++++.+++++.|++ ++
T Consensus 235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~ 279 (280)
T TIGR03366 235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD 279 (280)
T ss_pred hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence 899999998775 56799999999984 56566778888888 65
No 78
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.9e-37 Score=284.81 Aligned_cols=306 Identities=26% Similarity=0.296 Sum_probs=248.6
Q ss_pred ceeEEEecCC----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916 18 NMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (364)
Q Consensus 18 ~~~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
|+++++.++. .+++.+.|.|.+.++||+|||.++++|+.|+..+.|.+.. ....|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCC
Confidence 4667766442 4889999999999999999999999999999988775432 134588999999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHH
Q 017916 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH 172 (364)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~ 172 (364)
.+++||+|++.+ ..|+|++|+.+++++++++|+++++++++.+. .+.++|+
T Consensus 79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 130 (324)
T cd08292 79 GLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALM 130 (324)
T ss_pred CCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHH
Confidence 999999998752 25899999999999999999999998888665 6778898
Q ss_pred HHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 173 ACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+++.+++++|++|||+|+ |.+|++++|+|+++|++ ++++..++++.+.++++|++.+++++ ..++.+.+++.. .
T Consensus 131 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~ 205 (324)
T cd08292 131 LLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGIN-VINLVRRDAGVAELRALGIGPVVSTE--QPGWQDKVREAA--G 205 (324)
T ss_pred HHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecCHHHHHHHHhcCCCEEEcCC--CchHHHHHHHHh--C
Confidence 887789999999999987 99999999999999995 56666777777887889988777643 356666666553 3
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-----------CCcHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-----------KNTWPLCL 319 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 319 (364)
+.++|++|||+|+ .....++++++++|+++.+|.... ...+.......+++++.+.... .+.+++++
T Consensus 206 ~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (324)
T cd08292 206 GAPISVALDSVGG-KLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELL 284 (324)
T ss_pred CCCCcEEEECCCC-hhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHH
Confidence 5689999999996 567899999999999999985422 2233444456688888876542 23578899
Q ss_pred HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+++.+|.+. +.+.+.|++ +++.+|++.+.++...||+++.
T Consensus 285 ~l~~~g~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 285 TLALKGQLL--LPVEAVFDL--GDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHCCCcc--CccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence 999999984 334678888 9999999999988888999874
No 79
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.3e-37 Score=282.07 Aligned_cols=320 Identities=25% Similarity=0.384 Sum_probs=261.9
Q ss_pred ceeEEEecCC-----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916 18 NMAAWLLGVN-----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (364)
Q Consensus 18 ~~~~~~~~~~-----~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
|+++++..+. .+++.+.+.|.+.++||+||+.++++|+.|+....|.... ..+|.++|+|++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence 4566666444 7888888888899999999999999999999988775422 3568899999999999999999
Q ss_pred CCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHH
Q 017916 93 KTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVG 170 (364)
Q Consensus 93 ~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a 170 (364)
..+++||+|++.+ ..+|..|.+|..+++++|..+.+.+. ..+|+|++|+.++.+.++++|+++++.+++.+ ..+.+|
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta 156 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG 156 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence 9999999998754 46789999999999999998876654 34799999999999999999999999888755 488999
Q ss_pred HHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 171 ~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
|++++.++++++++|||+|+|++|++++++|+..|+ .+++++.++++.+.++++|++..++++..
T Consensus 157 ~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-------------- 221 (329)
T cd08298 157 YRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL-------------- 221 (329)
T ss_pred HHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc--------------
Confidence 999977999999999999889999999999999998 57777788889999999999876664321
Q ss_pred cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 328 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 328 (364)
.++++|+++++.+....+...+++++++|+++.+|...... ..+.. ...++..+.+.... .+.+++++++++++.+.
T Consensus 222 ~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~ 300 (329)
T cd08298 222 PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIK 300 (329)
T ss_pred CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCC
Confidence 13579999998777789999999999999999987533211 11111 23455556555443 45688899999999884
Q ss_pred CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
+ ..+.|++ +++++|++.++++...||+++
T Consensus 301 --~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 301 --P-EVETYPL--EEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --c-eEEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence 3 3578888 999999999999999999874
No 80
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.3e-37 Score=285.01 Aligned_cols=287 Identities=21% Similarity=0.264 Sum_probs=231.2
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (364)
Q Consensus 27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (364)
+.+++.+.+.|+++++||+|||+++++||.|..+... ....|.++|+|++|+|++ .++.|++||+|++.
T Consensus 19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~-- 87 (329)
T cd08294 19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES---KNSKFPVGTIVVAS-- 87 (329)
T ss_pred cceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec---CCCCCCCCCEEEee--
Confidence 6799999999999999999999999999987652211 124588999999999984 45679999999853
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC---ceEECCCCCCc------cchhhhhhhHHHHHHH-HH
Q 017916 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKLPDNVSL------EEGAMCEPLSVGLHAC-RR 176 (364)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~~lP~~~~~------~~aa~~~~~~~a~~~l-~~ 176 (364)
++|++|+.++.+ .++++|+++++ ..+++..++.|||+++ +.
T Consensus 88 -----------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~ 138 (329)
T cd08294 88 -----------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEI 138 (329)
T ss_pred -----------------------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHh
Confidence 578999999999 99999999872 2232334889999998 56
Q ss_pred cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 177 ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 177 ~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++++++++. +++.+.++++. +.++
T Consensus 139 ~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--~~~~~~v~~~~---~~gv 212 (329)
T cd08294 139 CKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--VSLEEALKEAA---PDGI 212 (329)
T ss_pred cCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHC---CCCc
Confidence 88999999999987 9999999999999999 5788888999999999999999888643 57777766553 4689
Q ss_pred cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC---Cc----cccchhhhhcCcEEEeeccC------CCcHHHHHHHH
Q 017916 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH---EM----TVPLTPAAVREVDVVGVFRY------KNTWPLCLELL 322 (364)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l 322 (364)
|++||++|+ +.+..++++++++|+++.+|.... .. ......+..+++++.+.... .+.++++++++
T Consensus 213 d~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 291 (329)
T cd08294 213 DCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWI 291 (329)
T ss_pred EEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHH
Confidence 999999995 788999999999999999874211 10 12233466788888876432 23477889999
Q ss_pred HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++|++. +.....|++ +++++|++.++++...||+++++
T Consensus 292 ~~g~i~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 292 KEGKLK--YREHVTEGF--ENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HCCCCc--CCcccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence 999984 334456788 99999999999999999999975
No 81
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.3e-36 Score=280.96 Aligned_cols=334 Identities=30% Similarity=0.484 Sum_probs=271.9
Q ss_pred ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++. ++..+++.+.+.|.+.+++|+|++.++++|+.|+....|.+.. ....|.++|+|++|+|+.+|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVTN 78 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCCC
Confidence 4677777 4567888888888889999999999999999999888764321 1345889999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
|++||+|++.+..+|..|.+|..+.+++|.+..+.+. ...|+|++|+.++.+.++++|+++++.+++.+. .+.+|+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 9999999999999999999999999999998655443 457899999999999999999999998888765 77889998
Q ss_pred H-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+ +..+++++++++|+|+ +.+|++++++++..|++ ++.++.++++.+.++.++.+..++. ...++.+.+.... .
T Consensus 158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~ 232 (342)
T cd08266 158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGAT-VIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRELT--G 232 (342)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHHHh--C
Confidence 7 5688999999999998 79999999999999995 6777788888888888887666543 2344545554432 2
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV 329 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~ 329 (364)
+.++|+++|++| ...+...+++++++|+++.++.... ...........+++.+.+.... ...+.+++++++++.+
T Consensus 233 ~~~~d~~i~~~g-~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-- 309 (342)
T cd08266 233 KRGVDVVVEHVG-AATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKL-- 309 (342)
T ss_pred CCCCcEEEECCc-HHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCc--
Confidence 457999999999 4678899999999999999974432 2223332345677777776544 4578889999999987
Q ss_pred CCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.+.+.+.|++ +++++|++.+.++...+|+++++
T Consensus 310 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 310 KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 5567788888 99999999999888889999864
No 82
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2e-36 Score=281.04 Aligned_cols=325 Identities=22% Similarity=0.323 Sum_probs=253.2
Q ss_pred ceeEEEecC---CceEEEE-ecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC-----------------CccCCCCcc
Q 017916 18 NMAAWLLGV---NTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----------------DFVVKEPMV 76 (364)
Q Consensus 18 ~~~~~~~~~---~~~~~~~-~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~-----------------~~~~~~p~~ 76 (364)
|+++++..+ ..+.+.+ .+.|.+.+++|+|||.++++|++|+..+.|.+.. .....+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 456666543 3556654 4777789999999999999999999888764321 112456899
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCC
Q 017916 77 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV 156 (364)
Q Consensus 77 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~ 156 (364)
+|||++|+|+++|+++++|++||+|++.+...|..|..|.. ...++ ...+|+|++|+.++.++++++|+++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~--------~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~ 151 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD--------IDYIG-SERDGGFAEYTVVPAENAYPVNSPL 151 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc--------ccccC-CCCCccceEEEEecHHHceeCCCCC
Confidence 99999999999999999999999999987777776655432 11111 1246999999999999999999999
Q ss_pred Cccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916 157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (364)
Q Consensus 157 ~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~ 234 (364)
++.+++.+. .+.+||++++..++++|++|||+|+ |++|++++++|+.+|++ +++++.++ +.+.++++|++.+.+.
T Consensus 152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~- 228 (350)
T cd08274 152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR- 228 (350)
T ss_pred CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC-
Confidence 988877664 8889999987788999999999998 99999999999999996 55665554 7888899998754432
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-C
Q 017916 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-K 312 (364)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 312 (364)
....+.+ ...+.+.++|++||++| .+.+..++++++++|+++.+|..... ...+...+..+++++.+.... .
T Consensus 229 -~~~~~~~----~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
T cd08274 229 -DAPLLAD----AKALGGEPVDVVADVVG-GPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTR 302 (350)
T ss_pred -CCccHHH----HHhhCCCCCcEEEecCC-HHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCH
Confidence 2222222 22234568999999999 47889999999999999999854322 234444556788888877655 5
Q ss_pred CcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 313 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 313 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.+.++++++.++++ .+.+.+.|++ +++++|++.+..+...||++++.
T Consensus 303 ~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 303 EVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 678999999999988 4556788888 99999999999988899999864
No 83
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.3e-36 Score=277.88 Aligned_cols=319 Identities=27% Similarity=0.413 Sum_probs=256.4
Q ss_pred ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 18 ~~~~~~~~~--~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
|+++++.++ ..+++.+.+.|+++++||+||+.++++|+.|+....+.. ...+|.++|+|++|+|+.+|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGV 76 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCC
Confidence 456766543 578888888888999999999999999999998776311 12357789999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l 174 (364)
++||+|++.+...|..|.+|+.++.++|.+..+.+. ...|+|++|+.++++.++++|+++++++++.+. .+.+||+++
T Consensus 77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l 155 (325)
T cd08264 77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL 155 (325)
T ss_pred CCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 999999999888999999999999999998765543 357999999999999999999999998888665 778999999
Q ss_pred HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916 175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
+.+++++|++|+|+|+ |++|++++++|+++|++ +++++ +.+.++++|++++++.+ +..+.++++. +
T Consensus 156 ~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~~----~ 222 (325)
T cd08264 156 KTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEIT----K 222 (325)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecch----HHHHHHHHHh----C
Confidence 7789999999999998 99999999999999995 55554 23666889988777532 2234444432 5
Q ss_pred CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCC
Q 017916 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP 331 (364)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~ 331 (364)
++|+++|++|+ ..+...+++|+++|+++.+|... .....+...+..++..+.+.... ++.++++++++...+ .
T Consensus 223 ~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~ 297 (325)
T cd08264 223 MADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK----V 297 (325)
T ss_pred CCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC----c
Confidence 79999999994 78899999999999999998532 22344445556667777776443 567888999885333 3
Q ss_pred ceEEEeeCChhhHHHHHHHHhcCCCceEEE
Q 017916 332 LVTHRFGFSQKEVEEAFETSARGGTAIKVM 361 (364)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 361 (364)
.+.+.|++ +++++|++.+.++...+|++
T Consensus 298 ~~~~~~~~--~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 298 KVWKTFKL--EEAKEALKELFSKERDGRIL 325 (325)
T ss_pred eeEEEEcH--HHHHHHHHHHHcCCCccccC
Confidence 45678888 99999999998887777753
No 84
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=9.8e-36 Score=274.25 Aligned_cols=325 Identities=26% Similarity=0.416 Sum_probs=266.1
Q ss_pred eeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916 19 MAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (364)
Q Consensus 19 ~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (364)
+++++.++ ..+++.+.|.|.+.+++|+|++.++++|+.|+....|.+. ...+|.++|+|++|+|+++|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCccccc
Confidence 35666766 6899999999999999999999999999999998877542 1346789999999999999999999999
Q ss_pred CCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916 98 GDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (364)
Q Consensus 98 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~ 175 (364)
||+|+..+. ..|.+|.+|+.++.++|++..+.+. ...|+|++|+.+++++++++|+++++.+++.+. .+.+||++++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~ 156 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR 156 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999987543 5699999999999999999765543 246999999999999999999999998888654 7789999987
Q ss_pred HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
..+++++++|||+|+|.+|++++++|+.+|+ .++++++++++.++++++|++.+++... .+.... ..+++
T Consensus 157 ~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-------~~~~~ 226 (330)
T cd08245 157 DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQA-------AAGGA 226 (330)
T ss_pred hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHHh-------ccCCC
Confidence 7889999999999888899999999999999 5777778888889999999887766432 222111 13479
Q ss_pred cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCce
Q 017916 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV 333 (364)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 333 (364)
|++||++++......++++|+++|+++.++..... .......+..++.++.+.... .+.++++++++.++.+. + .
T Consensus 227 d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~-~ 303 (330)
T cd08245 227 DVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK--P-M 303 (330)
T ss_pred CEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc--c-e
Confidence 99999988778889999999999999999753222 122233466677788776654 56788899999999984 3 4
Q ss_pred EEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 334 THRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
.+.|++ +++.+|++.+.++...||+++
T Consensus 304 ~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 304 IETFPL--DQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred EEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence 477888 999999999999999999875
No 85
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=4.3e-36 Score=256.01 Aligned_cols=294 Identities=18% Similarity=0.188 Sum_probs=237.0
Q ss_pred cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE--eCCCCCCCCCCCEEE
Q 017916 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK--VGSEVKTLVPGDRVA 102 (364)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~--vG~~v~~~~~Gd~V~ 102 (364)
.++.|++++.++|++++||||+|+.|.+++|- +.|..........|+-+|-..+|.++. +-|+..+|++||.|.
T Consensus 23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~ 98 (340)
T COG2130 23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV 98 (340)
T ss_pred CCCCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE
Confidence 34789999999999999999999999999992 223222221234466777666554433 236678899999998
Q ss_pred EcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchh---hhhhhHHHHHHH-HHcC
Q 017916 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MCEPLSVGLHAC-RRAN 178 (364)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa---~~~~~~~a~~~l-~~~~ 178 (364)
.. .+|++|.+++.+.+.++.+..-+..+. +-++..|||.+| +.++
T Consensus 99 ~~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igq 147 (340)
T COG2130 99 GV-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQ 147 (340)
T ss_pred ec-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcC
Confidence 65 689999999999999998664433333 335888999998 5699
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
+++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++++ ||++.++||.. +++.+.+++.+ ++++|
T Consensus 148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a~---P~GID 221 (340)
T COG2130 148 PKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEAC---PKGID 221 (340)
T ss_pred CCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHHC---CCCeE
Confidence 999999999987 9999999999999999 79999999999999987 99999999876 58888777664 78999
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcC---CCCC----ccccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHHE----MTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELL 322 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~---~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l 322 (364)
+.||++| ++.+...+..|+..+|++.+|. ...+ ....+..++.+.+++.|+... .+.++++.+|+
T Consensus 222 vyfeNVG-g~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv 300 (340)
T COG2130 222 VYFENVG-GEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWV 300 (340)
T ss_pred EEEEcCC-chHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHH
Confidence 9999999 6899999999999999999984 1111 122334467789999998762 46688999999
Q ss_pred HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++|+++.+.. -.-+| |++++||..+.+++++||+|+++
T Consensus 301 ~~GKi~~~et--i~dGl--EnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 301 KEGKIQYRET--IVDGL--ENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred HcCceeeEee--ehhhh--hccHHHHHHHhcCCccceEEEEe
Confidence 9999976653 33468 99999999999999999999975
No 86
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.2e-35 Score=270.64 Aligned_cols=297 Identities=38% Similarity=0.650 Sum_probs=245.9
Q ss_pred eeEEEec--CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 19 MAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 19 ~~~~~~~--~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
++++..+ +..+++.+.+.|++.+++|+|||.++++|+.|+....|.+. ....|.++|+|++|+|+.+|++++.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 2 KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred eeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcCC
Confidence 5666663 35699999999999999999999999999999988776541 134578999999999999999999999
Q ss_pred CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHH-
Q 017916 97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC- 174 (364)
Q Consensus 97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l- 174 (364)
+||+|++.+. .+|+.|++|..+..+.|.+..+.+ ....|+|++|+.++.++++++|+++++++|+.+..+.++|+++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l~ 157 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVA 157 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHHH
Confidence 9999999875 679999999999999998764433 3356999999999999999999999999887666888999998
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEE--ecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV--DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
..++++++++|||.|+|.+|++++|+|+++|++ ++.+ +.++++.++++++|++.+ ++ ...++.+.++.+. .+
T Consensus 158 ~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~l~~~~--~~ 231 (306)
T cd08258 158 ERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAELVNEIT--DG 231 (306)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHHHHHHc--CC
Confidence 558899999999987799999999999999996 4444 335567888899998776 54 3456777666553 25
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 325 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g 325 (364)
.++|++||++|+...+...+++|+++|+++.+|... ....++...++.+++++.|++.. +++++++++++++|
T Consensus 232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 689999999987788899999999999999998754 22444566777899999999876 77799999998875
No 87
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=3.2e-35 Score=270.01 Aligned_cols=311 Identities=26% Similarity=0.296 Sum_probs=248.6
Q ss_pred ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++.. +..+++.+.+.|.+.+++|+|+|.++++|+.|+....|.....+....|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 46666664 346777777777789999999999999999999888775433223456789999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+++||+|++... ...|+|++|+.++.++++++|+++++++++.+. .+.+||.+
T Consensus 81 ~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 134 (324)
T cd08244 81 AWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL 134 (324)
T ss_pred CCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH
Confidence 999999987521 136999999999999999999999998887664 77788655
Q ss_pred HHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
++.++++++++|||+|+ |.+|++++++|+.+|+ .++++++++++.+.++++|++.++++. ..++.+.+.... .+
T Consensus 135 ~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~ 209 (324)
T cd08244 135 LDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREAL--GG 209 (324)
T ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHc--CC
Confidence 57788999999999996 9999999999999999 577777888888999999998777643 345555555442 34
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-------CCcHHHHHHHHHc
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLRS 324 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~ 324 (364)
.++|+++|++|+ .....++++|+++|+++.+|..... ...+......+++++.+.... .+.+.++++++.+
T Consensus 210 ~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 288 (324)
T cd08244 210 GGVTVVLDGVGG-AIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAA 288 (324)
T ss_pred CCceEEEECCCh-HhHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHC
Confidence 679999999995 4668899999999999999854322 223333456777887766443 3457788999999
Q ss_pred CCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 325 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 325 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++ .+.+...|++ +++.+|++.+.++...||+++++
T Consensus 289 ~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 289 GRL--VPVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred CCc--cCccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 988 4457788888 99999999999999999999874
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=8.3e-36 Score=275.41 Aligned_cols=299 Identities=20% Similarity=0.303 Sum_probs=238.3
Q ss_pred cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE 104 (364)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
+++.+++.+.|.|+++++||+|||+++++|+.|+..+.|... ...+|.++|+|++|+|+++|++++.|++||+|++.
T Consensus 13 ~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 89 (336)
T TIGR02817 13 DPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYA 89 (336)
T ss_pred CcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEc
Confidence 357889999999999999999999999999999988876432 13568899999999999999999999999999864
Q ss_pred CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCC-
Q 017916 105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP- 181 (364)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~- 181 (364)
.. ....|+|++|+.+++++++++|+++++++++.++ .+.+||+++ ...++++
T Consensus 90 ~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~ 144 (336)
T TIGR02817 90 GD-------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDP 144 (336)
T ss_pred CC-------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCC
Confidence 20 1235999999999999999999999999988665 788999998 5577777
Q ss_pred ----CCEEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 182 ----ETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 182 ----g~~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
|++|||+|+ |++|++++|+|+.+ |+ .+++++.++++.++++++|++++++++ .++.+.+++. .++++
T Consensus 145 ~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~i~~~---~~~~v 217 (336)
T TIGR02817 145 VAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHS---KPLKAQLEKL---GLEAV 217 (336)
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECC---CCHHHHHHHh---cCCCC
Confidence 999999987 99999999999998 98 577777888899999999999888754 2566666652 34689
Q ss_pred cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-------------CCcHHHHHHHH
Q 017916 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------------KNTWPLCLELL 322 (364)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l 322 (364)
|+++|++++.+.....+++|+++|+++.++.. .......+..+++++.+.... ...++++++++
T Consensus 218 d~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 294 (336)
T TIGR02817 218 SYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLV 294 (336)
T ss_pred CEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHH
Confidence 99999987678889999999999999988532 122333344444554432111 14578899999
Q ss_pred HcCCCCCCCceEEEee-CChhhHHHHHHHHhcCCCceEEEEe
Q 017916 323 RSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 323 ~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
.++.+ ++.+.+.|+ ++.+++++|++.++++...||++++
T Consensus 295 ~~~~l--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 295 DAGKI--RTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HCCCe--eccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 99988 444444554 2238999999999999889999875
No 89
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.1e-35 Score=267.26 Aligned_cols=300 Identities=30% Similarity=0.458 Sum_probs=242.8
Q ss_pred cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEE
Q 017916 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL 103 (364)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 103 (364)
+++.+++.+.+.|++.++||+||+.++++|+.|+..+ .|..... ....|.++|+|++|+|+.+|++++.+++||+|++
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4567899999999999999999999999999999887 5532111 1235789999999999999999999999999997
Q ss_pred cCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHHHHcCCCCC
Q 017916 104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPE 182 (364)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g 182 (364)
+ ..|+|++|+.+++++++++|+++ ..++.. .++++++++++.++++++
T Consensus 82 ~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ 130 (312)
T cd08269 82 L-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAG 130 (312)
T ss_pred e-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCC
Confidence 5 24899999999999999999998 233333 577889998888889999
Q ss_pred CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (364)
Q Consensus 183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 262 (364)
++|||+|+|.+|++++|+|+.+|++.++++.+++++.++++++|++.+++. ...++.+.+.++. .+.++|++|||.
T Consensus 131 ~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~vd~vld~~ 206 (312)
T cd08269 131 KTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAGADVVIEAV 206 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCCCCEEEECC
Confidence 999999879999999999999999647778788888999999999877653 3356777776654 256899999999
Q ss_pred CCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC-----CCcHHHHHHHHHcCCCCCCCceEEE
Q 017916 263 GFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-----KNTWPLCLELLRSGKIDVKPLVTHR 336 (364)
Q Consensus 263 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~ 336 (364)
|........+++|+++|+++.+|... ....+.......+++++.+.... .+.+++++++++++.+.+.+.+.+.
T Consensus 207 g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 286 (312)
T cd08269 207 GHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHE 286 (312)
T ss_pred CCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeee
Confidence 87778899999999999999998543 22233334566777877766433 3578999999999998533346678
Q ss_pred eeCChhhHHHHHHHHhcCCC-ceEEEE
Q 017916 337 FGFSQKEVEEAFETSARGGT-AIKVMF 362 (364)
Q Consensus 337 ~~~~~~~~~~a~~~~~~~~~-~gkvvv 362 (364)
|++ +++++|++.+.++.. .+|+++
T Consensus 287 ~~~--~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 287 FPL--EELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred ecH--HHHHHHHHHHHhCCCCceEEEe
Confidence 888 999999999988844 689886
No 90
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=8.8e-35 Score=269.12 Aligned_cols=311 Identities=24% Similarity=0.337 Sum_probs=244.5
Q ss_pred ceeEEEecCC----ceEEEEecCCCCCC-CcEEEEEeeeeeCcccHhhhhhcccCCcc--CCCCcccccceeEEEEEeCC
Q 017916 18 NMAAWLLGVN----TLKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIEKVGS 90 (364)
Q Consensus 18 ~~~~~~~~~~----~~~~~~~~~p~~~~-~~VlV~v~~~~l~~~d~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~ 90 (364)
|+++++..+. .+++.+.|.|++.+ ++|+||+.++++|+.|+..+.|....... ...|.++|+|++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 5677777553 38999999998887 99999999999999999988775421100 12577999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916 91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 169 (364)
Q Consensus 91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~ 169 (364)
++..|++||+|++... ..|+|++|+.++.++++++|+++++++++.+. .+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t 133 (341)
T cd08290 81 GVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT 133 (341)
T ss_pred CCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence 9999999999987521 24899999999999999999999998888765 7889
Q ss_pred HHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh----hHHHHHHHcCCCeEEecCCC-cccHHH
Q 017916 170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAKELGADNIVKVSTN-LQDIAE 242 (364)
Q Consensus 170 a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~----~~~~~~~~lg~~~~~~~~~~-~~~~~~ 242 (364)
||+++. ...+++|++|||+|+ |.+|++++|+|+++|+++++++ .++ ++.++++++|+++++++... ..++..
T Consensus 134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 212 (341)
T cd08290 134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVV-RDRPDLEELKERLKALGADHVLTEEELRSLLATE 212 (341)
T ss_pred HHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEE-cCCCcchhHHHHHHhcCCCEEEeCcccccccHHH
Confidence 999985 478899999999987 9999999999999999644444 444 67788889999988775331 015555
Q ss_pred HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC----------
Q 017916 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY---------- 311 (364)
Q Consensus 243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~---------- 311 (364)
.++.+. ++++|++|||+|+ ......+++++++|+++.++... .....+......+++++.+....
T Consensus 213 ~i~~~~---~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (341)
T cd08290 213 LLKSAP---GGRPKLALNCVGG-KSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEE 288 (341)
T ss_pred HHHHHc---CCCceEEEECcCc-HhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHH
Confidence 555443 2279999999996 56678999999999999997432 22233444556788888876532
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceEEEe---eCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 312 -KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 312 -~~~~~~~~~~l~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
...+.++++++.++++. +.....+ ++ +++++|++.+.++...||+++++
T Consensus 289 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 289 KEDMLEELAELIREGKLK--APPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHHHHHHHcCCcc--CCcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence 12577889999999984 4445556 77 99999999999999999999874
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-34 Score=264.80 Aligned_cols=309 Identities=23% Similarity=0.328 Sum_probs=245.8
Q ss_pred cceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916 17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (364)
Q Consensus 17 ~~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
+|+|+++..+. .+++.+.+.|++.+++|+|||.++++|+.|+....|.... ....|.++|+|++|+|+++|++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCCC
Confidence 47788877543 6777788888889999999999999999998887764321 134467899999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHH
Q 017916 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH 172 (364)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~ 172 (364)
.+++||+|+++. .+|+|++|+.++.++++++|+++++.+++.+ ..+.+||+
T Consensus 79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~ 130 (334)
T PTZ00354 79 RFKEGDRVMALL----------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ 130 (334)
T ss_pred CCCCCCEEEEec----------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999998751 3489999999999999999999998887755 48889999
Q ss_pred HHHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 173 ACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 173 ~l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
++.. .++++|++|||+|+ |++|++++++|+++|++. +.+..++++.+.++++|++.++++... .++.+.++...
T Consensus 131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v-~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~-- 206 (334)
T PTZ00354 131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAAT-IITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPKVKKLT-- 206 (334)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHHHHHHh--
Confidence 9854 88999999999997 999999999999999964 456788888998899999877764321 12555565543
Q ss_pred cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-cc-ccchhhhhcCcEEEeeccCC-----------CcHHH
Q 017916 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVFRYK-----------NTWPL 317 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 317 (364)
.+.++|++||++| .+.+..++++|+++|+++.++..... .. +....+..+..++.+..... +.+++
T Consensus 207 ~~~~~d~~i~~~~-~~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (334)
T PTZ00354 207 GEKGVNLVLDCVG-GSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFERE 285 (334)
T ss_pred CCCCceEEEECCc-hHHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHH
Confidence 2568999999998 67889999999999999999853322 12 44445556666777654321 23577
Q ss_pred HHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 318 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++++++++.+ .+.+.+.|++ ++++++++.+.++...||+++++
T Consensus 286 ~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 286 VLPYMEEGEI--KPIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV 328 (334)
T ss_pred HHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence 8899999988 4456788888 99999999999888889999864
No 92
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.2e-34 Score=262.24 Aligned_cols=292 Identities=25% Similarity=0.307 Sum_probs=237.1
Q ss_pred eeEEEec--CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 19 MAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 19 ~~~~~~~--~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
+++++.+ +..+++.+.+.|.+.++||+||+.++++|+.|+....+ ...|.++|+|++|+|+++|++++.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~~ 74 (305)
T cd08270 2 RALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGPA 74 (305)
T ss_pred eEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCCC
Confidence 4555554 56788889999999999999999999999999886542 12367899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~ 175 (364)
+||+|++.. ..|+|++|+.++.++++++|+++++++++.++ .+.+||+++.
T Consensus 75 ~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~ 126 (305)
T cd08270 75 VGARVVGLG----------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALR 126 (305)
T ss_pred CCCEEEEec----------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHH
Confidence 999998751 35999999999999999999999999888765 7889999986
Q ss_pred HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 176 ~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
.....+|++|+|+|+ |++|++++++|+.+|+ .++.++.++++.+.++++|++..+.... + +. +++
T Consensus 127 ~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-------~~---~~~ 192 (305)
T cd08270 127 RGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS---E-------LS---GAP 192 (305)
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---c-------cc---CCC
Confidence 644446999999998 9999999999999999 5777778889999999999875543111 1 11 347
Q ss_pred ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhh--cCcEEEeeccC-----CCcHHHHHHHHHcCC
Q 017916 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAV--REVDVVGVFRY-----KNTWPLCLELLRSGK 326 (364)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~l~~g~ 326 (364)
+|+++|++|+ ......+++|+++|+++.+|..... ...+...+.. ++.++.+.... .+.++.+++++++++
T Consensus 193 ~d~vl~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (305)
T cd08270 193 VDLVVDSVGG-PQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGR 271 (305)
T ss_pred ceEEEECCCc-HHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCC
Confidence 9999999995 5788999999999999999854321 2233333433 57777776543 456888999999999
Q ss_pred CCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+. +.+.+.+++ +++++|++.+.++...||+++++
T Consensus 272 i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 272 LD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 94 446778888 99999999999999999999875
No 93
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.7e-35 Score=267.79 Aligned_cols=299 Identities=28% Similarity=0.399 Sum_probs=226.8
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCcc-CCCCcccccceeEE---EEEeC-CCCCCCCCCCEE
Q 017916 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV-VKEPMVIGHECAGV---IEKVG-SEVKTLVPGDRV 101 (364)
Q Consensus 27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~-~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V 101 (364)
......+.++|.+.+++++|++.++++||.|+.+..|.++.... ..+|.+.+.++.|+ +...| ..+..+..||.+
T Consensus 18 ~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~ 97 (347)
T KOG1198|consen 18 EVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV 97 (347)
T ss_pred ceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence 45556689999999999999999999999999999987654421 25665555555554 33444 333446666665
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH-Hc--
Q 017916 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RA-- 177 (364)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~-~~-- 177 (364)
... ...|+|+||+++|+..++++|+++++.+||+++ .+.+||.++. ..
T Consensus 98 ~~~----------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~ 149 (347)
T KOG1198|consen 98 VAF----------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPG 149 (347)
T ss_pred eec----------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccc
Confidence 532 467999999999999999999999999999776 8999999995 47
Q ss_pred ----CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 178 ----NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 178 ----~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
++++|++|||+|+ |++|++++|+|+..|+ ..+++.+++++.+++++||+++++||+. +++.+.++..+ +
T Consensus 150 ~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~~---~ 223 (347)
T KOG1198|consen 150 KRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKYT---G 223 (347)
T ss_pred ccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhhc---C
Confidence 7999999999987 9999999999999996 3566668999999999999999999876 66766665543 6
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccccchhhh--hc----------CcEEEe--eccCCCcHHH
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAA--VR----------EVDVVG--VFRYKNTWPL 317 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~--~~----------~~~~~~--~~~~~~~~~~ 317 (364)
.++|+||||+|.. .......++...|+...++.... ..+....... .+ ...... .....+.++.
T Consensus 224 ~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 302 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA 302 (347)
T ss_pred CCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence 7999999999953 66677778877776444442111 1111111000 11 111111 1112667899
Q ss_pred HHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 318 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+.++++.+++ +|.+.+.|++ +++.+|++.+.++...||+++.+
T Consensus 303 l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 303 LVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred HHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence 9999999987 8999999999 99999999999999999999864
No 94
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.6e-34 Score=261.41 Aligned_cols=329 Identities=27% Similarity=0.375 Sum_probs=261.0
Q ss_pred ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+|+++. ..+.+++.+.+.|.+.+++++|++.++++|+.|+....|.+... ...|.++|+|++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~ 78 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVTR 78 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCcC
Confidence 4566666 34678888888888899999999999999999999887654322 246889999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+++||+|++.....|..+.+|...... ..+ ...+|+|++|+.++.++++++|+++++.+++.+. .+.+||++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~------~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~ 151 (336)
T cd08276 79 FKVGDRVVPTFFPNWLDGPPTAEDEAS------ALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA 151 (336)
T ss_pred CCCCCEEEEeccccccccccccccccc------ccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence 999999999876666555544332221 111 2347899999999999999999999988887665 78889999
Q ss_pred HH-HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 174 CR-RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 174 l~-~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+. .+.+++|++|+|+|+|++|++++++|++.|++ ++.++.++++.+.++++|.+.+++... ..++.+.++... .+
T Consensus 152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~~ 227 (336)
T cd08276 152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGAR-VIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--GG 227 (336)
T ss_pred HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--CC
Confidence 84 57899999999997799999999999999995 777778888889888899888776432 145666665553 24
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK 330 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~ 330 (364)
.++|++||+++ ......++++++++|+++.+|..... ........+.+++++.+.... ...+.+++++++++.+ .
T Consensus 228 ~~~d~~i~~~~-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~ 304 (336)
T cd08276 228 RGVDHVVEVGG-PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRI--R 304 (336)
T ss_pred CCCcEEEECCC-hHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCc--c
Confidence 68999999998 67888999999999999999854332 223344566788888887644 5678889999998887 3
Q ss_pred CceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 331 PLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 331 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+...+.|++ ++++++++.+.++...+|+++++
T Consensus 305 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 305 PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 445678888 99999999999888899999874
No 95
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.9e-34 Score=264.12 Aligned_cols=308 Identities=25% Similarity=0.287 Sum_probs=241.5
Q ss_pred ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++.+. ++..+++.+.+.|.++++||+|||.++++|+.|+....|.+.. ...|.++|+|++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCCC
Confidence 5566655 3468999999999999999999999999999999887764421 245789999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+++||+|+... ...|+|++|+.++.++++++|+++++++++.+. .+.+||.+
T Consensus 79 ~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 131 (327)
T PRK10754 79 IKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYL 131 (327)
T ss_pred CCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999997531 134899999999999999999999998887654 77788888
Q ss_pred HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+. ..++++|++|+|+|+ |.+|++++++|+.+|++ +++++.++++.++++++|++++++.+ ..++.+.++.+. .
T Consensus 132 l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~ 206 (327)
T PRK10754 132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGSAQKAQRAKKAGAWQVINYR--EENIVERVKEIT--G 206 (327)
T ss_pred HHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHCCCCEEEcCC--CCcHHHHHHHHc--C
Confidence 74 578999999999986 99999999999999995 67777888888999999998877643 356666666654 3
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcE------EEeeccC----CCcHHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVD------VVGVFRY----KNTWPLCLE 320 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~ 320 (364)
++++|++|||+| .......+++++++|+++.+|..... .......+..++.. +.+.... .+.+.++++
T Consensus 207 ~~~~d~vl~~~~-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
T PRK10754 207 GKKVRVVYDSVG-KDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS 285 (327)
T ss_pred CCCeEEEEECCc-HHHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHH
Confidence 568999999999 47788899999999999999854322 11222222222211 1111111 233567889
Q ss_pred HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
++.+|.+.+.....+.|++ +++.+|++.++++...||+|+.
T Consensus 286 ~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 286 LIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence 9999998543345678888 9999999999999999999985
No 96
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.3e-34 Score=264.95 Aligned_cols=313 Identities=26% Similarity=0.320 Sum_probs=240.8
Q ss_pred ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 18 ~~~~~~~~~--~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
|+++++.++ ..+++.+.+.|+++++||+|||.++++|+.|+....+.+ ....|.++|+|++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF 76 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence 467788877 789999999999999999999999999999988765432 12357789999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l 174 (364)
++||+|++++...|. ....+|+|++|+.++.++++++|+++++.+++.++ .+.+||+++
T Consensus 77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l 136 (339)
T cd08249 77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL 136 (339)
T ss_pred CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence 999999987543221 01246999999999999999999999999888776 888999998
Q ss_pred H-HcCC----------CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHH
Q 017916 175 R-RANI----------GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242 (364)
Q Consensus 175 ~-~~~~----------~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 242 (364)
. ..++ +++++|||+|+ |.+|++++++|+++|++ ++++. ++++.++++++|+++++++. ..++.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~--~~~~~~ 212 (339)
T cd08249 137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH--DPDVVE 212 (339)
T ss_pred hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC--CchHHH
Confidence 4 3443 78999999998 99999999999999995 55555 55888888999998887753 356666
Q ss_pred HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhccc--CCEEEEEcCCCCCccccchhhhhcCcEEEeec--------cCC
Q 017916 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA--GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF--------RYK 312 (364)
Q Consensus 243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 312 (364)
.++.+. ++++|++||++|+++.+...++++++ +|+++.++........ ........+...... ...
T Consensus 213 ~l~~~~---~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T cd08249 213 DIRAAT---GGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEP-RKGVKVKFVLGYTVFGEIPEDREFGE 288 (339)
T ss_pred HHHHhc---CCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccC-CCCceEEEEEeeeecccccccccchH
Confidence 665543 46799999999965788999999999 9999999754332101 111111111111111 113
Q ss_pred CcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916 313 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 364 (364)
Q Consensus 313 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~ 364 (364)
..++++.++++++.+.+ .....+++..+++++|++.+..+. ..+|+++++
T Consensus 289 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 289 VFWKYLPELLEEGKLKP--HPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHcCCccC--CCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 45778999999998843 344556611299999999999998 899999975
No 97
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.1e-33 Score=258.64 Aligned_cols=305 Identities=23% Similarity=0.270 Sum_probs=240.2
Q ss_pred ceeEEEec-----CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916 18 NMAAWLLG-----VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (364)
Q Consensus 18 ~~~~~~~~-----~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
|+++++.+ ++.+++.+.+.|.+.+++|+|||.++++|+.|+....|.+... ...|.++|+|++|+|+.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~v 79 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEGV 79 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCCC
Confidence 56776663 3678899999999999999999999999999999877644221 3568899999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHH
Q 017916 93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH 172 (364)
Q Consensus 93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~ 172 (364)
+.+++||+|++. ..|+|++|+.++.++++++|++. .+.+++...+.+||+
T Consensus 80 ~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~ 129 (329)
T cd08250 80 TDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASI 129 (329)
T ss_pred CCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHH
Confidence 999999999874 34899999999999999999973 233444458889999
Q ss_pred HHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 173 ~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
++. ..++++|++|+|+|+ |.+|++++++|+..|++ ++++++++++.+.++++|++.+++.+. .++.+.+...
T Consensus 130 ~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~--- 203 (329)
T cd08250 130 ALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCH-VIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE--- 203 (329)
T ss_pred HHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCe-EEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh---
Confidence 985 478999999999997 99999999999999995 677777888888889999877766433 4555555443
Q ss_pred cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC----------ccccchhhhhcCcEEEeeccC------CCc
Q 017916 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE----------MTVPLTPAAVREVDVVGVFRY------KNT 314 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~------~~~ 314 (364)
.++++|++||++| .......+++++++|+++.+|..... ..........+++++.+.... .+.
T Consensus 204 ~~~~vd~v~~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (329)
T cd08250 204 YPKGVDVVYESVG-GEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQH 282 (329)
T ss_pred cCCCCeEEEECCc-HHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHH
Confidence 2467999999999 57889999999999999999853221 001112345677777776432 345
Q ss_pred HHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 315 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 315 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+.+++++++++.+.........|++ +++++|++.+.++...||++++
T Consensus 283 ~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 283 LDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence 7888999999988432223455778 9999999999998888999874
No 98
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=2.2e-33 Score=258.00 Aligned_cols=308 Identities=20% Similarity=0.266 Sum_probs=235.8
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++.++. .+++.+.|.|.+++++|+|||.++++|+.|+..+.|.+. ....+|.++|+|++|+|+++ +++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~--~~~~ 76 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGG--VTRNYPHTPGIDAAGTVVSS--DDPR 76 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCC--CCCCCCCccCcccEEEEEEe--CCCC
Confidence 4677777554 899999999999999999999999999999998877532 12345789999999999998 4578
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
|++||+|++.+.. .+ ...+|+|++|+.+++++++++|+++++++|+.+. .+.+++.+
T Consensus 77 ~~~Gd~V~~~~~~---------------------~g-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~ 134 (325)
T cd05280 77 FREGDEVLVTGYD---------------------LG-MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS 134 (325)
T ss_pred CCCCCEEEEcccc---------------------cC-CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence 9999999975210 00 1246899999999999999999999999988665 77788888
Q ss_pred HHH---cCCC-CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916 174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 174 l~~---~~~~-~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
++. ..++ .+++|||+|+ |.+|++++|+|+++|++ +++++.++++.++++++|++++++.+. ........
T Consensus 135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~- 208 (325)
T cd05280 135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRED----LLDESKKP- 208 (325)
T ss_pred HHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHH-
Confidence 743 3345 3579999998 99999999999999995 777778899999999999988776432 11112222
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHHHHHH
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLE 320 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 320 (364)
..++++|++||++|+ ..+...+++++++|+++.+|.... +.......+..+++++.+.... .+.++.+.+
T Consensus 209 -~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05280 209 -LLKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLAT 286 (325)
T ss_pred -hcCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHH
Confidence 224579999999995 788999999999999999985432 2233334444678887775432 123344555
Q ss_pred HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++..+. .+.+..+|++ +++++|++.+.++...||+++++
T Consensus 287 ~~~~~~---~~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 287 EWKPDL---LEIVVREISL--EELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHhcCC---ccceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 555663 3346788899 99999999999999999999875
No 99
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.3e-33 Score=259.27 Aligned_cols=296 Identities=27% Similarity=0.376 Sum_probs=239.6
Q ss_pred ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCc
Q 017916 28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI 107 (364)
Q Consensus 28 ~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 107 (364)
.+++.+.+.|.+.+++|+|||.++++|+.|...+.+.+.. ....|.++|+|++|+|+.+|++++.+++||+|++.+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG-- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence 6778888889999999999999999999999887765422 234578999999999999999999999999999752
Q ss_pred CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH-HcCCCCCCEE
Q 017916 108 SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNV 185 (364)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~V 185 (364)
..|+|++|+.++.+.++++|+++++.+++.+. .+.+||+++. ...+.+|++|
T Consensus 89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v 142 (323)
T cd05282 89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV 142 (323)
T ss_pred --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence 14899999999999999999999988877654 7788998874 4778999999
Q ss_pred EEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916 186 LIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (364)
Q Consensus 186 LI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~ 264 (364)
||+|+ |.+|++++++|+++|++ ++++..++++.+.++++|++.++++.. .++...++... .+.++|++|||+|+
T Consensus 143 lI~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vl~~~g~ 217 (323)
T cd05282 143 IQNAANSAVGRMLIQLAKLLGFK-TINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGARLALDAVGG 217 (323)
T ss_pred EEcccccHHHHHHHHHHHHCCCe-EEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCceEEEECCCC
Confidence 99988 99999999999999995 666667888888889999988777532 34555555442 35689999999996
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-----------CCcHHHHHHHHHcCCCCCCCc
Q 017916 265 NKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKPL 332 (364)
Q Consensus 265 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~g~~~~~~~ 332 (364)
......+++++++|+++.+|..... ...+...+..+++++.+.... .+.++++++++.++++ .+.
T Consensus 218 -~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~ 294 (323)
T cd05282 218 -ESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVL--TTP 294 (323)
T ss_pred -HHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCc--ccC
Confidence 4567889999999999999854332 233333444478887776533 2357889999999998 444
Q ss_pred eEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+.+.|++ +++++|++.+.++...||++++
T Consensus 295 ~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 295 VGAKFPL--EDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred ccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence 6788888 9999999999998888999875
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.4e-33 Score=255.81 Aligned_cols=305 Identities=21% Similarity=0.294 Sum_probs=233.6
Q ss_pred eEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916 20 AAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (364)
Q Consensus 20 ~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
|+++. +++.+++++.|.|.+++++|+|||.++++|+.|+....|.+. .....|.++|+|++|+|+. .+++.|+
T Consensus 2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG--VVRSYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC--CCCCCCccceeeeEEEEEe--cCCCCCC
Confidence 44544 456889999999999999999999999999999988877542 1134588999999999988 5667899
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (364)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~ 175 (364)
+||+|++.+... ..+.+|+|++|+.++.++++++|+++++.+++.++ .+.+|+.+++
T Consensus 78 ~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~ 135 (323)
T TIGR02823 78 EGDEVIVTGYGL----------------------GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVM 135 (323)
T ss_pred CCCEEEEccCCC----------------------CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999999753110 01246899999999999999999999998888765 6677776663
Q ss_pred ---HcCCCCCC-EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 176 ---RANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 176 ---~~~~~~g~-~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
.+.+++|+ +|||+|+ |.+|++++++|+++|++ +++++.++++.+.++++|++.+++.+. .+ ..++.+
T Consensus 136 ~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~--- 207 (323)
T TIGR02823 136 ALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL--- 207 (323)
T ss_pred HhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh---
Confidence 34588998 9999998 99999999999999995 555556777778889999987776422 11 123333
Q ss_pred cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELL 322 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l 322 (364)
.+.++|+++||+| .+.+..++++++++|+++.+|.... ........++.+++++.+.... ...+.++.+++
T Consensus 208 ~~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T TIGR02823 208 EKERWAGAVDTVG-GHTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDL 286 (323)
T ss_pred cCCCceEEEECcc-HHHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHh
Confidence 2345999999999 4678899999999999999985432 2222334455778888875432 12356666777
Q ss_pred HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
..+.+ .+. ...|++ +++++|++.+.++...||+++++
T Consensus 287 ~~~~~--~~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 287 KPRNL--ESI-TREITL--EELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred hcCCC--cCc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence 77776 333 467888 99999999999999999999874
No 101
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.5e-33 Score=254.04 Aligned_cols=305 Identities=25% Similarity=0.333 Sum_probs=238.8
Q ss_pred ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++.+..+ ..+++.+.+.|.+.++||+|||.++++|+.|+....|... ....|.++|+|++|+|+++|. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~ 75 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GT 75 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CC
Confidence 355665533 4677778888888999999999999999999988876432 134578999999999999995 57
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+++||+|++..... ....+|+|++|+.+++++++++|+++++++++.+. ++.+||++
T Consensus 76 ~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 133 (320)
T cd08243 76 FTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGS 133 (320)
T ss_pred CCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHH
Confidence 99999999863211 01246999999999999999999999988877654 88999999
Q ss_pred HHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+.. ..+++|++|||+|+ |.+|++++|+|+.+|++ ++.++.++++.+.++++|++.++.. ..++.+.++.+
T Consensus 134 l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~---- 205 (320)
T cd08243 134 LFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGAT-VTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA---- 205 (320)
T ss_pred HHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh----
Confidence 854 67899999999998 99999999999999995 6777778888999999999877642 34666666554
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc---ccchhh--hhcCcEEEeeccC---CCcHHHHHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT---VPLTPA--AVREVDVVGVFRY---KNTWPLCLELLR 323 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~l~ 323 (364)
++++|++||++|+ ..+...+++++++|+++.+|....... ...... ..+++.+.+.... ...+++++++++
T Consensus 206 ~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
T cd08243 206 PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVA 284 (320)
T ss_pred CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHH
Confidence 5689999999994 788999999999999999985322111 111111 1456666665432 345788999999
Q ss_pred cCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 324 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 324 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
++.+ ++...+.|++ +++++|++.+.++...||+++
T Consensus 285 ~~~~--~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 285 AGHL--DIPPSKVFTF--DEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred CCce--ecccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence 9988 4446678888 999999999998888889886
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=7.7e-33 Score=254.52 Aligned_cols=310 Identities=19% Similarity=0.242 Sum_probs=231.8
Q ss_pred ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+|+++..+ ..+++++.|.|.+.++||+||+.++++|+.|.....+.. .....+|.++|+|++|+|+++| ++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~~~--~~~ 76 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGG--KIVKRYPFIPGIDLAGTVVESN--DPR 76 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCc--cccCCCCcCcccceeEEEEEcC--CCC
Confidence 456666643 368899999999999999999999999999987654311 1123458899999999999854 578
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
|++||+|++.+.. ++ ....|+|++|+.+++++++++|+++++++++.++ .+.+|+.+
T Consensus 77 ~~~Gd~V~~~~~~---------------------~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~ 134 (326)
T cd08289 77 FKPGDEVIVTSYD---------------------LG-VSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS 134 (326)
T ss_pred CCCCCEEEEcccc---------------------cC-CCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHH
Confidence 9999999875310 00 1246999999999999999999999999988765 67778877
Q ss_pred HHH---cCC-CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916 174 CRR---ANI-GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 174 l~~---~~~-~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
++. ..+ .++++|||+|+ |.+|++++|+|+++|+ .++++++++++.++++++|++.+++.+. ...+.++.+
T Consensus 135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~- 209 (326)
T cd08289 135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---LQEESIKPL- 209 (326)
T ss_pred HHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---HHHHHHHhh-
Confidence 743 333 35789999998 9999999999999999 5777778889999999999988776432 123334433
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC---CCcHHHHHHHHHc
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY---KNTWPLCLELLRS 324 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~ 324 (364)
.+.++|++||++|+ ......+++++++|+++.+|.... ........++.+++++.+.... ......+++.+..
T Consensus 210 --~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (326)
T cd08289 210 --EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT 286 (326)
T ss_pred --ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh
Confidence 25679999999995 788899999999999999986422 2222344555788888886432 1223333333322
Q ss_pred CCCC---CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 325 GKID---VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 325 g~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.+. ..+.+.+.|++ +++.+|++.+.++...||+++++
T Consensus 287 -~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 287 -DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred -hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence 221 12345788899 99999999999999999999875
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.4e-32 Score=252.29 Aligned_cols=307 Identities=22% Similarity=0.279 Sum_probs=239.8
Q ss_pred ceeEEEecCC------ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916 18 NMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91 (364)
Q Consensus 18 ~~~~~~~~~~------~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 91 (364)
|+++++..+. .++..+.+.|++.+++|+||+.++++|+.|+....+... ....|.++|+|++|+|+.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~ 77 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE 77 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence 3567777553 366677888888999999999999999999988766332 1345779999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHH
Q 017916 92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 170 (364)
Q Consensus 92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a 170 (364)
++.|++||+|++... ....|+|++|+.++.++++++|++++.++++.+. .+.+|
T Consensus 78 v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta 132 (336)
T cd08252 78 VTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTA 132 (336)
T ss_pred CCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHH
Confidence 999999999986421 1245899999999999999999999988887665 77789
Q ss_pred HHHH-HHcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHH
Q 017916 171 LHAC-RRANIGP-----ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242 (364)
Q Consensus 171 ~~~l-~~~~~~~-----g~~VLI~Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 242 (364)
|+++ +.+.+++ |++|+|+|+ |++|++++++|+.+| + .+++++.++++.++++++|++.+++.. .++.+
T Consensus 133 ~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~ 208 (336)
T cd08252 133 WEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLAE 208 (336)
T ss_pred HHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHHH
Confidence 9887 5577777 999999986 999999999999999 7 677777888899999999998877643 24555
Q ss_pred HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-----------
Q 017916 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY----------- 311 (364)
Q Consensus 243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 311 (364)
.++.. .++++|++||++|.+..+..++++++++|+++.+|... ...+...+..+++++.+....
T Consensus 209 ~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (336)
T cd08252 209 QLEAL---GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMI 283 (336)
T ss_pred HHHhh---CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchh
Confidence 55422 24689999999997788899999999999999997542 233333444566776653321
Q ss_pred --CCcHHHHHHHHHcCCCCCCCc-eEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 312 --KNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 312 --~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
...++++++++.++.+.+... ....+++ +++++|++.+.++...||++++
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 284 EQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred hHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence 134778999999998842211 1234567 9999999999999999999874
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=9.3e-32 Score=246.56 Aligned_cols=311 Identities=28% Similarity=0.411 Sum_probs=245.1
Q ss_pred eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
+++++.. +..+++.+.+.|.+.+++|+|++.++++|+.|+....|.+.. ....|.++|+|++|+|+.+|++++.|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (325)
T cd08253 2 RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDGL 79 (325)
T ss_pred ceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCCC
Confidence 4555553 346888899999999999999999999999999887764322 23568899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l 174 (364)
++||+|++.++.. ....|++++|+.++.+.++++|+++++.+++.+. .+.+||+++
T Consensus 80 ~~Gd~v~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l 136 (325)
T cd08253 80 KVGDRVWLTNLGW-----------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRAL 136 (325)
T ss_pred CCCCEEEEecccc-----------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHH
Confidence 9999999863210 0136899999999999999999999988887665 888999998
Q ss_pred HH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 RR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
.. .++++|++|+|+|+ +.+|++++++++..|+ .+++++.++++.+.++++|++.+++.. ..++.+.++.+. .+
T Consensus 137 ~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~ 211 (325)
T cd08253 137 FHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILAAT--AG 211 (325)
T ss_pred HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHHHc--CC
Confidence 54 88999999999997 9999999999999999 577777888888888889988776643 345555555543 24
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-------CCcHHHHHHHHHcC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLRSG 325 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~g 325 (364)
+++|+++|++|. ......+++++++|+++.++............+..++.++.+...+ .+.++.+.+++.++
T Consensus 212 ~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (325)
T cd08253 212 QGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADG 290 (325)
T ss_pred CceEEEEECCch-HHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCC
Confidence 589999999995 5678889999999999999754322233333334566666554332 23466677788888
Q ss_pred CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.+ .+.....|++ +++.++++.+.++...||+++++
T Consensus 291 ~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 291 AL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred Cc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 87 4556678888 99999999999999999999874
No 105
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.2e-31 Score=245.52 Aligned_cols=305 Identities=26% Similarity=0.361 Sum_probs=242.6
Q ss_pred ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++.. +..+++.+.+.|.+.+++|+|||.++++|+.|+....+.+.. ...+|.++|+|++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~ 78 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVTG 78 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCCC
Confidence 46777765 456788888888889999999999999999999887664321 2346789999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+++||+|+++ ..+|+|++|+.+++++++++|+++++.+++.+. .+.++|++
T Consensus 79 ~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~ 130 (323)
T cd05276 79 WKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQN 130 (323)
T ss_pred CCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHH
Confidence 9999999875 134899999999999999999999988887664 88899999
Q ss_pred HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+. ...+.++++|+|+|+ |++|++++++++..|++ ++.++.++++.+.++.+|++.+++.. ..++.+.+.... .
T Consensus 131 ~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~ 205 (323)
T cd05276 131 LFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGAR-VIATAGSEEKLEACRALGADVAINYR--TEDFAEEVKEAT--G 205 (323)
T ss_pred HHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHHHHHHh--C
Confidence 84 578899999999997 99999999999999995 67777788888888889987766543 245555555443 2
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-----------CCcHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-----------KNTWPLCL 319 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 319 (364)
+.++|++||++|+ ......+++++++|+++.++.... ........++.+++++.+.... ...+.+++
T Consensus 206 ~~~~d~vi~~~g~-~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
T cd05276 206 GRGVDVILDMVGG-DYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVW 284 (323)
T ss_pred CCCeEEEEECCch-HHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHH
Confidence 4679999999994 557889999999999999985322 2233344455678887776532 12356788
Q ss_pred HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
+++.++++ .+...+.|++ +++++|++.+.++...||+++
T Consensus 285 ~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 285 PLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence 88989988 4456788888 999999999998888888874
No 106
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.3e-31 Score=246.14 Aligned_cols=307 Identities=21% Similarity=0.254 Sum_probs=235.5
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++.+++ .+++++.|.|++++++|+|||.++++|+.|+....|.+. .....|.++|+|++|+|++ +++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~ 76 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG--IVRTFPLVPGIDLAGTVVE--SSSPR 76 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc--ccCCCCCccccceEEEEEe--CCCCC
Confidence 4667766543 799999999999999999999999999999988776431 1134578899999999988 77788
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+++||+|++..... + ...+|+|++|+.++.++++++|+++++++++.+. .+++++.+
T Consensus 77 ~~~Gd~V~~~~~~~--------------~--------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 134 (324)
T cd08288 77 FKPGDRVVLTGWGV--------------G--------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLC 134 (324)
T ss_pred CCCCCEEEECCccC--------------C--------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 99999999752100 0 0135899999999999999999999998888665 66677766
Q ss_pred HH---HcCCC-CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916 174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 174 l~---~~~~~-~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
++ ..... ++++|||+|+ |.+|++++|+|+++|++ +++++.++++.++++++|+++++++++ +...++.+
T Consensus 135 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~- 208 (324)
T cd08288 135 VMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE-VVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL- 208 (324)
T ss_pred HHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh-
Confidence 53 44555 6789999998 99999999999999995 677778889999999999988877542 22233333
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHHHHHH
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLE 320 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 320 (364)
...++|.+||+++. ......+..++.+|+++.+|.... ........+..+++++.+.... .+.+..+.+
T Consensus 209 --~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd08288 209 --QKERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLAR 285 (324)
T ss_pred --ccCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHH
Confidence 24468999999994 566788889999999999885321 1123333444678888876422 234667778
Q ss_pred HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++.++.+ ++ +.+.+++ +++++|++.++.+...||+++++
T Consensus 286 ~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 286 DLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence 8888877 44 3678888 99999999999999999999875
No 107
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=7.3e-32 Score=250.50 Aligned_cols=307 Identities=25% Similarity=0.326 Sum_probs=230.7
Q ss_pred ceeEEEecCC----ceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccC-------C-----ccCCCCcccccc
Q 017916 18 NMAAWLLGVN----TLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA-------D-----FVVKEPMVIGHE 80 (364)
Q Consensus 18 ~~~~~~~~~~----~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~-------~-----~~~~~p~~~G~e 80 (364)
|+++++.+.. .+++.+.+.|.+ ++++|+|||.++++|+.|+....|...+ . ....+|.++|+|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 4566655332 388899999998 5999999999999999999988763211 0 024568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (364)
Q Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~ 160 (364)
++|+|+.+|++++.+++||+|++.+.. ...|+|++|+.+++++++++|+++++..
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 135 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE 135 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence 999999999999999999999975321 1359999999999999999999999988
Q ss_pred hhhhh-hhHHHHHHHH-HcCCC----CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916 161 GAMCE-PLSVGLHACR-RANIG----PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (364)
Q Consensus 161 aa~~~-~~~~a~~~l~-~~~~~----~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~ 233 (364)
++.+. .+.++|+++. .+.+. +|++|+|+|+ |++|++++++|+++|++ ++++..+ ++.++++++|++.+++.
T Consensus 136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~g~~~~~~~ 213 (350)
T cd08248 136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSLGADDVIDY 213 (350)
T ss_pred HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHhCCceEEEC
Confidence 88665 8889999884 46665 4999999997 99999999999999995 5555544 67788899998877764
Q ss_pred CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc----cc----cchhhhh-----
Q 017916 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM----TV----PLTPAAV----- 300 (364)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~----~~~~~~~----- 300 (364)
.. .++.+.+.. ..++|++||++|. .....++++++++|+++.++...... .. .......
T Consensus 214 ~~--~~~~~~l~~-----~~~vd~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
T cd08248 214 NN--EDFEEELTE-----RGKFDVILDTVGG-DTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV 285 (350)
T ss_pred CC--hhHHHHHHh-----cCCCCEEEECCCh-HHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence 32 344443322 3579999999995 58889999999999999997432110 00 0001111
Q ss_pred c----CcEEE-e-eccCCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 301 R----EVDVV-G-VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 301 ~----~~~~~-~-~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+ ..... + .......+.++++++.++.+ .+.+.+.|++ +++.+|++.+.++...+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence 1 11010 1 11124568899999999987 4456788888 9999999999988888898874
No 108
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=6e-32 Score=248.89 Aligned_cols=293 Identities=21% Similarity=0.216 Sum_probs=228.6
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 017916 26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105 (364)
Q Consensus 26 ~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 105 (364)
++.+++.+.+.|++.+++|+|||.++++|+.|.....+......+...+.++|+|++|+|+++|++ .+++||+|+++
T Consensus 17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~- 93 (329)
T cd05288 17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF- 93 (329)
T ss_pred ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc-
Confidence 468999999999999999999999999999877655442111111123567899999999999964 79999999864
Q ss_pred CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECCCCCC--ccc-hh-hhhhhHHHHHHHH-HcCC
Q 017916 106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVS--LEE-GA-MCEPLSVGLHACR-RANI 179 (364)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~lP~~~~--~~~-aa-~~~~~~~a~~~l~-~~~~ 179 (364)
++|++|+.+++ +.++++|++++ +.. ++ +...+.+||+++. ...+
T Consensus 94 ------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~ 143 (329)
T cd05288 94 ------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKP 143 (329)
T ss_pred ------------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCC
Confidence 58999999999 99999999985 333 33 3458889999984 4788
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.++++|||+|+ |.+|++++|+|+..|+ .++++++++++.+.+++ +|++.++++.. .++.+.+..+. ++++|+
T Consensus 144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~~~d~ 217 (329)
T cd05288 144 KPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PDGIDV 217 (329)
T ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cCCceE
Confidence 99999999996 9999999999999999 57777788888888888 99988777543 45666665553 467999
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc------ccchhhhhcCcEEEeeccC------CCcHHHHHHHHHcC
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT------VPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSG 325 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g 325 (364)
+|||+| ...+...+++++++|+++.+|....... .+......+++++.+.... .+.+.++++++.++
T Consensus 218 vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 296 (329)
T cd05288 218 YFDNVG-GEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEG 296 (329)
T ss_pred EEEcch-HHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCC
Confidence 999999 5788899999999999999984332111 1233455677888776543 24578889999999
Q ss_pred CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
.+... ....+++ +++.++++.+.++...||+++
T Consensus 297 ~i~~~--~~~~~~l--~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 297 KLKYR--EDVVEGL--ENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred Ccccc--ccccccH--HHHHHHHHHHhcCCCccceeC
Confidence 98433 3455778 999999999998888888874
No 109
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.9e-31 Score=244.81 Aligned_cols=307 Identities=28% Similarity=0.361 Sum_probs=240.4
Q ss_pred ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++.++ +.+++.+.+.|.+.+++|+|+|.++++|+.|+....+... .....|.++|+|++|+|+.+|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTR 78 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCC
Confidence 467777654 3478888888888999999999999999999988776432 12345889999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
|++||+|++.... .....|+|++|+.++.++++++|+++++..++.++ .+.+||++
T Consensus 79 ~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (326)
T cd08272 79 FRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEG 135 (326)
T ss_pred CCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHH
Confidence 9999999975310 00135899999999999999999999988877665 77889988
Q ss_pred H-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+ +..++++|++++|+|+ |.+|++++++|+.+|++ ++.++.+ ++.++++++|++.+++.. .. +.+.++.+. .
T Consensus 136 l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~~~~~--~ 208 (326)
T cd08272 136 LVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYATASS-EKAAFARSLGADPIIYYR--ET-VVEYVAEHT--G 208 (326)
T ss_pred HHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHHHHhc--C
Confidence 7 5688999999999986 99999999999999995 5666666 888888889987766632 23 555555443 2
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC------------CCcHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY------------KNTWPLCL 319 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 319 (364)
+.++|+++|++++ ......+++++++|+++.++... . ..+.....+++.+.+.... .+.+.+++
T Consensus 209 ~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (326)
T cd08272 209 GRGFDVVFDTVGG-ETLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAA 284 (326)
T ss_pred CCCCcEEEECCCh-HHHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHH
Confidence 4679999999995 67788999999999999987543 1 1222333566666654321 34577888
Q ss_pred HHHHcCCCCCCCceE-EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 320 ELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 320 ~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++.++.+ .+.+. +.|++ +++.++++.+.++...+|+++++
T Consensus 285 ~~l~~~~l--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 285 RLVERGQL--RPLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHCCCc--ccccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence 99999987 44433 77888 99999999999888899999875
No 110
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.1e-31 Score=247.60 Aligned_cols=315 Identities=20% Similarity=0.272 Sum_probs=227.5
Q ss_pred eeEEEecC-CceEEEEecCCCC---CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC-
Q 017916 19 MAAWLLGV-NTLKIQPFELPSL---GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK- 93 (364)
Q Consensus 19 ~~~~~~~~-~~~~~~~~~~p~~---~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~- 93 (364)
+++++..+ ..++++..+.|.+ ++++|+||+.++++|+.|+....+.... ....|.++|+|++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH--FKVKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc--cccCCCccCceeEEEEEEeCccccc
Confidence 45555544 3455555555443 8999999999999999998876532111 112478999999999999999998
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----ceEECCCCCCccchhhhh-hhH
Q 017916 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCE-PLS 168 (364)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~~lP~~~~~~~aa~~~-~~~ 168 (364)
.|++||+|++.....| ...|+|++|+.++.+ .++++|+++++.+++.++ .+.
T Consensus 80 ~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ 136 (352)
T cd08247 80 EWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG 136 (352)
T ss_pred CCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence 8999999997632111 135899999999998 789999999999988765 778
Q ss_pred HHHHHHHH-c-CCCCCCEEEEEcC-CHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCeEEecCCCcc-cHHHH
Q 017916 169 VGLHACRR-A-NIGPETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ-DIAEE 243 (364)
Q Consensus 169 ~a~~~l~~-~-~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~ 243 (364)
+||++++. . ++++|++|||+|+ +.+|++++++|+.+|. +.++++. ++++.+.++++|++.+++++.... .+...
T Consensus 137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~ 215 (352)
T cd08247 137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKP 215 (352)
T ss_pred HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHH
Confidence 99999865 4 6999999999998 8999999999998754 3566665 445556778899988877543211 03333
Q ss_pred HHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc---cCCEEEEEc-CCCCCcc-----------c----cchhhhhcCcE
Q 017916 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR---AGGKVCLVG-MGHHEMT-----------V----PLTPAAVREVD 304 (364)
Q Consensus 244 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~~~-----------~----~~~~~~~~~~~ 304 (364)
+.... +.++++|++|||+|+......++++++ ++|+++.++ ....+.. . ......+....
T Consensus 216 ~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
T cd08247 216 VLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYN 294 (352)
T ss_pred HHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcc
Confidence 32221 115689999999997678889999999 999999874 2111100 0 01111123333
Q ss_pred EEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 305 VVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 305 ~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+...... .+.+.++++++.++.+ .+.+.+.|++ +++++|++.++++...||+++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 295 YQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred eEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence 3222211 2457889999999987 4556788889 99999999999998999999874
No 111
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=7.2e-31 Score=240.01 Aligned_cols=296 Identities=27% Similarity=0.348 Sum_probs=235.5
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (364)
Q Consensus 27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (364)
..+.+.+.+.+.+.+++|+|+|.++++|+.|+....+.+. ..+|.++|+|++|+|+.+|++++++++||+|++..
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 86 (320)
T cd05286 12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG- 86 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence 4567777777778999999999999999999988776432 24577999999999999999999999999998751
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHHH-HcCCCCCCE
Q 017916 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR-RANIGPETN 184 (364)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~ 184 (364)
..|+|++|+.++.+.++++|++++..+++.+ ..+.++++++. ..++++|++
T Consensus 87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~ 139 (320)
T cd05286 87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT 139 (320)
T ss_pred ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence 2589999999999999999999998887755 47778888884 588999999
Q ss_pred EEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916 185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (364)
Q Consensus 185 VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g 263 (364)
|||+|+ |.+|++++++|+.+|+ .+++++.++++.+.++++|++.+++.. ..++.+.++.+. .+.++|++|||++
T Consensus 140 vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vl~~~~ 214 (320)
T cd05286 140 VLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR--DEDFVERVREIT--GGRGVDVVYDGVG 214 (320)
T ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--chhHHHHHHHHc--CCCCeeEEEECCC
Confidence 999997 9999999999999999 567777888889999999998776532 345656665543 2567999999999
Q ss_pred CHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC---------CCcHHHHHHHHHcCCCCCCCce
Q 017916 264 FNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---------KNTWPLCLELLRSGKIDVKPLV 333 (364)
Q Consensus 264 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~ 333 (364)
+ ......+++++++|+++.+|..... ..+....+..+++++.+.... .+.+.+++++++++.+. +..
T Consensus 215 ~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~ 291 (320)
T cd05286 215 K-DTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK--VEI 291 (320)
T ss_pred c-HhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc--Ccc
Confidence 5 6888999999999999999854332 122223333567776543211 23456788899999884 445
Q ss_pred EEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 334 THRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.+.|++ +++++|++.+.++...+|++++.
T Consensus 292 ~~~~~~--~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 292 GKRYPL--ADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cceEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 677888 99999999999988889999863
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.1e-31 Score=242.89 Aligned_cols=299 Identities=24% Similarity=0.304 Sum_probs=231.3
Q ss_pred eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
|++.+.. ++.+++.+.+.|.+.+++|+|+|.++++|+.|+..+.|.+... ..+|.++|+|++|+|+.+|++++.|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~ 79 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTGF 79 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCccC
Confidence 4555553 3678999999999999999999999999999998887654221 2468899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l 174 (364)
++||+|++.+ ..|+|++|+.++.+.++++|+++++.+++.+. .+.+||+++
T Consensus 80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l 131 (331)
T cd08273 80 EVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQML 131 (331)
T ss_pred CCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHH
Confidence 9999999752 24889999999999999999999998877554 888999998
Q ss_pred H-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 R-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
. .+++++|++|+|+|+ |.+|++++++|+..|++ ++.+.. +++.++++++|+.. ++. ...++... .. .+
T Consensus 132 ~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~--~~---~~ 201 (331)
T cd08273 132 HRAAKVLTGQRVLIHGASGGVGQALLELALLAGAE-VYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA--ML---TP 201 (331)
T ss_pred HHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh--hc---cC
Confidence 5 478999999999997 99999999999999994 666665 88888888999653 332 22333332 12 24
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc--ccc--------------hhhhhcCcEEEeeccC-----
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT--VPL--------------TPAAVREVDVVGVFRY----- 311 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~--------------~~~~~~~~~~~~~~~~----- 311 (364)
+++|+++||+|+. .....+++++++|+++.+|....... ... .....+.++.......
T Consensus 202 ~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 280 (331)
T cd08273 202 GGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDP 280 (331)
T ss_pred CCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCH
Confidence 5799999999954 58899999999999999985432211 110 0111223333332211
Q ss_pred ---CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 312 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 312 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
.+.+++++++++++.+ .+.+.+.|++ ++++++++.+.++...||+|+
T Consensus 281 ~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 281 KLFRQDLTELLDLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence 3567889999999988 4556788888 999999999998888899886
No 113
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=4.5e-31 Score=239.81 Aligned_cols=288 Identities=24% Similarity=0.379 Sum_probs=229.0
Q ss_pred CCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccc
Q 017916 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHC 115 (364)
Q Consensus 36 ~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~ 115 (364)
.|.+.+++|+||+.++++|+.|+..+.+.+.. ...+|.++|+|++|+|+.+|++++++++||+|+++..
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence 56788999999999999999999988765432 2356889999999999999999999999999987521
Q ss_pred cCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcC-CHH
Q 017916 116 KGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPI 193 (364)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~ 193 (364)
..+|+|++|+.+++++++++|+++++++++.+. .+.+||++++..++++|++|+|+|+ +.+
T Consensus 71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~ 133 (303)
T cd08251 71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT 133 (303)
T ss_pred -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence 245899999999999999999999998888665 7889999998889999999999976 999
Q ss_pred HHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHH
Q 017916 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS 273 (364)
Q Consensus 194 G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~ 273 (364)
|++++|+|+++|+ .+++++.++++.+.++++|++.+++.. ..++.+.++.+. .+.++|+++|+++ +......++
T Consensus 134 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~~~~~d~v~~~~~-~~~~~~~~~ 207 (303)
T cd08251 134 GLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLT--GGRGVDVVINTLS-GEAIQKGLN 207 (303)
T ss_pred HHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHc--CCCCceEEEECCc-HHHHHHHHH
Confidence 9999999999999 577777888888888999998877643 346666666553 2568999999998 678889999
Q ss_pred hcccCCEEEEEcCCCCC--ccccchhhhhcCcEEEe-----eccC-----CCcHHHHHHHHHcCCCCCCCceEEEeeCCh
Q 017916 274 ATRAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVG-----VFRY-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 341 (364)
Q Consensus 274 ~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~ 341 (364)
+++++|+++.++..... ....... +.+++.+.. .... .+.+.++++++.++.+ .+...+.|++
T Consensus 208 ~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~-- 282 (303)
T cd08251 208 CLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL--RPTVSRIFPF-- 282 (303)
T ss_pred HhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc--cCCCceEEcH--
Confidence 99999999998754321 1122111 222222221 1111 3457788899999988 4456688888
Q ss_pred hhHHHHHHHHhcCCCceEEEE
Q 017916 342 KEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 342 ~~~~~a~~~~~~~~~~gkvvv 362 (364)
++++++++.+.++...||+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 283 DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 999999999999888888874
No 114
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.1e-31 Score=241.52 Aligned_cols=308 Identities=26% Similarity=0.332 Sum_probs=238.0
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++.++. .+++.+.|.|++.+++|+|||.++++|+.|+....+.+.. ...|.++|+|++|+|+.+|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~ 77 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG 77 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence 5778888776 8999999999999999999999999999999887664321 123778999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 173 (364)
+++||+|++.+.. ...|+|++|+.++.+.++++|+++++.+++.+ ..+.+++++
T Consensus 78 ~~~Gd~V~~~~~~-------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~ 132 (325)
T cd08271 78 WKVGDRVAYHASL-------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA 132 (325)
T ss_pred CCCCCEEEeccCC-------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence 9999999975310 13589999999999999999999998888765 488899999
Q ss_pred HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+. .+++++|++|+|+|+ +.+|++++++|+..|+. ++++. ++++.++++.+|++.+++. ...++.+.+++.. .
T Consensus 133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~ 206 (325)
T cd08271 133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKEIT--G 206 (325)
T ss_pred HHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHHHc--C
Confidence 84 588899999999998 89999999999999995 55554 6677788888998776653 3345555565543 2
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc--cccchhhhhcCcEEEeeccC---------CCcHHHHHH
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM--TVPLTPAAVREVDVVGVFRY---------KNTWPLCLE 320 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 320 (364)
+.++|++++++++. ....++++++++|+++.++...... .........+.+.+...... .+.+.++++
T Consensus 207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T cd08271 207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE 285 (325)
T ss_pred CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence 46799999999964 5567899999999999986332211 11111222333333332211 234577889
Q ss_pred HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++++.+ .+...+.|++ +++.++++.+.++...+|+++++
T Consensus 286 ~~~~~~i--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 286 LLAAGKL--EPLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHCCCe--eeccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence 9999988 4445677888 99999999999888899999874
No 115
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=3.8e-31 Score=236.41 Aligned_cols=266 Identities=37% Similarity=0.633 Sum_probs=216.8
Q ss_pred cEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCC
Q 017916 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNL 122 (364)
Q Consensus 43 ~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 122 (364)
||+|+|.++++|+.|+....|.+. ....+|.++|+|++|+|+++|++++.|++||+|++.+..+|..|.+|+. .
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~ 74 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L 74 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence 689999999999999998877542 1245688999999999999999999999999999999999999999997 7
Q ss_pred CCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHH
Q 017916 123 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLG 200 (364)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~l 200 (364)
|+...+.+ ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++. ..++++++|||+|++.+|++++++
T Consensus 75 ~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~ 153 (271)
T cd05188 75 CPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL 153 (271)
T ss_pred CCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 77666544 456799999999999999999999999998877 589999999965 556899999999985599999999
Q ss_pred HHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCE
Q 017916 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (364)
Q Consensus 201 a~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (364)
++..|. .+++++.++++.++++++|.+.++++. ..++.+.+. ...++++|++||++++......++++|+++|+
T Consensus 154 a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 154 AKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 999997 678888888899999999988776643 344555444 23356899999999965788899999999999
Q ss_pred EEEEcCCCCCccc-cchhhhhcCcEEEeeccC-CCcHHHHHHH
Q 017916 281 VCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLEL 321 (364)
Q Consensus 281 ~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 321 (364)
++.++........ .......+++++.+.... ...+++++++
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence 9999854432222 233466788888888765 4456666654
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=2.2e-30 Score=237.54 Aligned_cols=306 Identities=24% Similarity=0.332 Sum_probs=240.6
Q ss_pred eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
+++.+.. +..+++.+.+.|.+++++|+|||.++++|+.|+....+.+... ..+|.++|+|++|+|+.+|+++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (325)
T TIGR02824 2 KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP--PGASDILGLEVAGEVVAVGEGVSRW 79 (325)
T ss_pred ceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCCCCccceeEEEEEEeCCCCCCC
Confidence 4555443 3457777777777899999999999999999988776543221 2357899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l 174 (364)
++||+|+++. .+|+|++|+.++.++++++|+++++..++.+. .+.++|+++
T Consensus 80 ~~Gd~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~ 131 (325)
T TIGR02824 80 KVGDRVCALV----------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNL 131 (325)
T ss_pred CCCCEEEEcc----------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHH
Confidence 9999998751 34899999999999999999999988777554 888999886
Q ss_pred -HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 -RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 -~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+...++++++++|+|+ |++|++++++++.+|++ ++++..++++.++++.+|++.+++. ...++.+.++... .+
T Consensus 132 ~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~ 206 (325)
T TIGR02824 132 FQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGAR-VFTTAGSDEKCAACEALGADIAINY--REEDFVEVVKAET--GG 206 (325)
T ss_pred HHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHHHHHc--CC
Confidence 5688999999999997 99999999999999994 6677778888888888998766553 2345555555443 24
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccCC-----------CcHHHHHH
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRYK-----------NTWPLCLE 320 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 320 (364)
+++|+++|++|+ .....++++++++|+++.++... .........+..+++++.+..... ..+.++++
T Consensus 207 ~~~d~~i~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T TIGR02824 207 KGVDVILDIVGG-SYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWP 285 (325)
T ss_pred CCeEEEEECCch-HHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHH
Confidence 579999999994 57788999999999999998532 112334444557888888765321 23466788
Q ss_pred HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+++++.+ .+...+.|++ ++++++++.+.++...||+++++
T Consensus 286 ~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 286 LLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence 8889887 4456778888 99999999999888899999875
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-29 Score=231.88 Aligned_cols=311 Identities=28% Similarity=0.396 Sum_probs=240.6
Q ss_pred eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916 19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (364)
Q Consensus 19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
+++.+.. +..+++.+.+.|.+.+++|+|+|.++++|+.|+....+.+... ...|.++|+|++|+|+.+|+++.+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 2 RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred eEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCcC
Confidence 4555553 3467777888888899999999999999999988776644221 3457899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHH
Q 017916 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC 174 (364)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l 174 (364)
++||+|++++... ....|++++|+.++.++++++|+++++.+++.+ ..+.++|+++
T Consensus 80 ~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~ 136 (328)
T cd08268 80 AVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGAL 136 (328)
T ss_pred CCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHH
Confidence 9999999863211 124589999999999999999999998887755 4888999998
Q ss_pred H-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 R-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
. ...+.++++|+|+|+ |.+|++++++++..|+ .++.++.++++.+.++++|.+.+++.+. .++.+.+.... .+
T Consensus 137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~ 211 (328)
T cd08268 137 VELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEVLRIT--GG 211 (328)
T ss_pred HHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHh--CC
Confidence 4 588899999999998 9999999999999999 4666777888888888889877766432 45555555443 24
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC---------CCcHHHHHHHH
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---------KNTWPLCLELL 322 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l 322 (364)
.++|++|+++|+ ......+++++++|+++.++..... ........+.+++.+.+.... ...++.+.+++
T Consensus 212 ~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (328)
T cd08268 212 KGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGL 290 (328)
T ss_pred CCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHH
Confidence 579999999995 6778899999999999999854321 222333346677777665432 22455666677
Q ss_pred HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
.++.+ .+.....|++ +++.++++.+.++...||++++.
T Consensus 291 ~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 291 ASGAL--KPVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HCCCC--cCCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 78877 4446677888 99999999999888889999864
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.2e-29 Score=232.47 Aligned_cols=305 Identities=31% Similarity=0.493 Sum_probs=240.4
Q ss_pred ceeEEEe---cCCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916 18 NMAAWLL---GVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (364)
Q Consensus 18 ~~~~~~~---~~~~~~~~~~~~p~~~-~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
|+++++. .+..+++.+.+ |.+. +++++|++.++++|+.|+....|.+.. ....|.++|+|++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~ 77 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVT 77 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCC
Confidence 3567765 23567777777 6655 599999999999999999887664321 123467899999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHH
Q 017916 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH 172 (364)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~ 172 (364)
.+++||+|++++ ..|+|++|+.++.++++++|++++..+++.+ ..+.+|++
T Consensus 78 ~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~ 129 (323)
T cd08241 78 GFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYH 129 (323)
T ss_pred CCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHH
Confidence 999999999752 2489999999999999999999998877755 48888999
Q ss_pred HHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 173 ~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
++. ..+++++++|+|+|+ |.+|++++++|+..|++ +++++.++++.+.++++|++..++.. ..++.+.++...
T Consensus 130 ~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~-- 204 (323)
T cd08241 130 ALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGAR-VIAAASSEEKLALARALGADHVIDYR--DPDLRERVKALT-- 204 (323)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCE-EEEEeCCHHHHHHHHHcCCceeeecC--CccHHHHHHHHc--
Confidence 885 688999999999998 99999999999999995 77777788888888889987766533 345666665543
Q ss_pred cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc-ccchhhhhcCcEEEeeccC----------CCcHHHHH
Q 017916 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY----------KNTWPLCL 319 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 319 (364)
.+.++|+++|++|+ .....++++++++|+++.++....... +.......+++++.+.... .+.+.+++
T Consensus 205 ~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
T cd08241 205 GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELF 283 (323)
T ss_pred CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHH
Confidence 24579999999994 788889999999999999985433222 2223445677777776432 24567889
Q ss_pred HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916 320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363 (364)
Q Consensus 320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 363 (364)
+++.++.+ .+.....|++ +++.++++.+.++...+|++++
T Consensus 284 ~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 284 DLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence 99999987 4556788888 9999999999888888898874
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=3.7e-30 Score=234.39 Aligned_cols=301 Identities=28% Similarity=0.368 Sum_probs=231.2
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (364)
Q Consensus 18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
|+++++..+. .+++.+.+.|.+++++|+|||.++++|+.|+....|..........|.++|+|++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 4566666433 3566777778889999999999999999999887764321122345889999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (364)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~ 173 (364)
+++||+|++.+.. ...|+|++|+.++.++++++|+++++..++.+. .+.+++++
T Consensus 81 ~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQA 135 (309)
T ss_pred CCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHH
Confidence 9999999976310 125899999999999999999999988877665 77889988
Q ss_pred HHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
+.. ..+.+|++|+|+|+ |.+|++++++++..|++ +++++.++ +.++++++|++.+++... .++.+ ...
T Consensus 136 ~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~~ 205 (309)
T cd05289 136 LFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER------AAA 205 (309)
T ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------ccC
Confidence 855 56899999999997 99999999999999995 55555565 778888899877665432 23222 123
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCC
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDV 329 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~ 329 (364)
+.++|+++|++|+ ......+++++++|+++.++....... ....+++++...... .+.+.+++++++++.+
T Consensus 206 ~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 278 (309)
T cd05289 206 PGGVDAVLDTVGG-ETLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKL-- 278 (309)
T ss_pred CCCceEEEECCch-HHHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCE--
Confidence 4679999999995 577899999999999999975432111 222344444433222 4678889999999987
Q ss_pred CCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
.+.+.+.|++ ++++++++.+..+...+|+++
T Consensus 279 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 279 RPVVDRVFPL--EDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence 4556788888 999999999998877888874
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-29 Score=232.11 Aligned_cols=296 Identities=29% Similarity=0.382 Sum_probs=232.6
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (364)
Q Consensus 27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (364)
..+.+.+.+.|.+.+++|+||+.++++|+.|+....|.+.. ....|.++|+|++|+|+.+|+++.++++||+|+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 88 (337)
T cd08275 12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT- 88 (337)
T ss_pred cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 36777788888889999999999999999999887764322 134577899999999999999999999999999751
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCE
Q 017916 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETN 184 (364)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~ 184 (364)
..|+|++|+.++.++++++|+++++.+++.+. .+.++|+++ +..++++|++
T Consensus 89 ---------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 141 (337)
T cd08275 89 ---------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQS 141 (337)
T ss_pred ---------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCE
Confidence 24899999999999999999999988877665 888999998 4588999999
Q ss_pred EEEEcC-CHHHHHHHHHHHHCCCCEEEEEe-cChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916 185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (364)
Q Consensus 185 VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 262 (364)
|+|+|+ |.+|++++++|+.+ . .+.++. ..+++.+.++.+|++.+++.. ..++.+.++.+. ++++|+++||+
T Consensus 142 vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~d~v~~~~ 214 (337)
T cd08275 142 VLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYR--TQDYVEEVKKIS---PEGVDIVLDAL 214 (337)
T ss_pred EEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCC--CCcHHHHHHHHh---CCCceEEEECC
Confidence 999998 99999999999998 2 233332 345577888889987766643 356666666654 46799999999
Q ss_pred CCHHHHHHHHHhcccCCEEEEEcCCCCCc--cc---------------cchhhhhcCcEEEeeccC---------CCcHH
Q 017916 263 GFNKTMSTALSATRAGGKVCLVGMGHHEM--TV---------------PLTPAAVREVDVVGVFRY---------KNTWP 316 (364)
Q Consensus 263 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~---------~~~~~ 316 (364)
|+ .....++++++++|+++.+|...... .. .......+++++.+.... ...+.
T Consensus 215 g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (337)
T cd08275 215 GG-EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD 293 (337)
T ss_pred cH-HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence 94 57788999999999999997432210 11 112345667777665421 12467
Q ss_pred HHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 317 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
++++++.++.+ .+.....|++ ++++++++.+.++...||+++++
T Consensus 294 ~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 294 KLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 78889999987 4556678888 99999999999988899999874
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=4.8e-30 Score=234.94 Aligned_cols=295 Identities=27% Similarity=0.329 Sum_probs=222.5
Q ss_pred EEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCC
Q 017916 30 KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC 109 (364)
Q Consensus 30 ~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 109 (364)
++.+.+.|++++++|+|++.++++|+.|+....|.+........|..+|+|++|+|.++|++++++++||+|++....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 778889999999999999999999999998877644211112356789999999999999999999999999876321
Q ss_pred CCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH-cCCCCCCEEEE
Q 017916 110 WRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLI 187 (364)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~VLI 187 (364)
...|+|++|+.++.+.++++|++++..+++.+. .+.+||++++. .++++|++|+|
T Consensus 93 -----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli 149 (319)
T cd08267 93 -----------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI 149 (319)
T ss_pred -----------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 135899999999999999999999988877664 78899999865 56899999999
Q ss_pred EcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC-H
Q 017916 188 MGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF-N 265 (364)
Q Consensus 188 ~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~-~ 265 (364)
+|+ |.+|++++++|+.+|++ +++++.+ ++.++++++|++++++... .++. + ....++++|+++||+|+ .
T Consensus 150 ~g~~g~~g~~~~~la~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~--~~~~~~~~d~vi~~~~~~~ 220 (319)
T cd08267 150 NGASGGVGTFAVQIAKALGAH-VTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A--LTAGGEKYDVIFDAVGNSP 220 (319)
T ss_pred EcCCcHHHHHHHHHHHHcCCE-EEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h--hccCCCCCcEEEECCCchH
Confidence 998 99999999999999994 6666554 7888889999877766433 2332 1 12235679999999984 2
Q ss_pred HHHHHHHHhcccCCEEEEEcCCCCCccccc-----hh-hhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEEeeC
Q 017916 266 KTMSTALSATRAGGKVCLVGMGHHEMTVPL-----TP-AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 339 (364)
Q Consensus 266 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 339 (364)
......+..++++|+++.+|.......... .. ...+.+.........+.+.++++++.++.+ .+.+.+.|++
T Consensus 221 ~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 298 (319)
T cd08267 221 FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPL 298 (319)
T ss_pred HHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeeeeEEcH
Confidence 233344445999999999985432211111 11 112222222222225678899999999987 4557788888
Q ss_pred ChhhHHHHHHHHhcCCCceEEEE
Q 017916 340 SQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 340 ~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
+++++|++.+.++...+|+++
T Consensus 299 --~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 299 --EDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred --HHHHHHHHHHhcCCCCCcEeC
Confidence 999999999998888888874
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=9.6e-29 Score=222.83 Aligned_cols=276 Identities=26% Similarity=0.325 Sum_probs=218.2
Q ss_pred CcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCC
Q 017916 42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN 121 (364)
Q Consensus 42 ~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~ 121 (364)
+||+|||.++++|+.|+....|.+ ..+|.++|+|++|+|+++|+++.++++||+|++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~----------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL----------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence 589999999999999999887643 2457899999999999999999999999999875
Q ss_pred CCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHH
Q 017916 122 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTM 198 (364)
Q Consensus 122 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai 198 (364)
..|+|++|+.++.+.++++|+++++.+++.+ ..+.+++.++ +...+++|++|+|+|+ |.+|++++
T Consensus 59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~ 126 (293)
T cd05195 59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI 126 (293)
T ss_pred ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence 2489999999999999999999998888866 4888899888 4588999999999986 99999999
Q ss_pred HHHHHCCCCEEEEEecChhHHHHHHHcC--CCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc
Q 017916 199 LGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR 276 (364)
Q Consensus 199 ~la~~~g~~~vv~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 276 (364)
|+|+.+|+ .++.+..++++.+.++.++ ++.+++.. ..++.+.++... .+.++|++||++|+. .....+++++
T Consensus 127 ~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 127 QLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcc
Confidence 99999999 5777777888888888887 56666532 345666665553 256899999999965 8899999999
Q ss_pred cCCEEEEEcCCCCC--ccccchhhhhcCcEEEeeccC----------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhH
Q 017916 277 AGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV 344 (364)
Q Consensus 277 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~ 344 (364)
++|+++.++..... ....... ..+++.+...... .+.+.++++++.++.+ .+.....|.+ +++
T Consensus 201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~ 275 (293)
T cd05195 201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--ASE 275 (293)
T ss_pred cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hhH
Confidence 99999999853321 1122222 2234444432211 2356788899999987 5556677788 899
Q ss_pred HHHHHHHhcCCCceEEEE
Q 017916 345 EEAFETSARGGTAIKVMF 362 (364)
Q Consensus 345 ~~a~~~~~~~~~~gkvvv 362 (364)
.++++.+.++...||+++
T Consensus 276 ~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 276 IDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHHHHHhcCCCCceecC
Confidence 999999998888888874
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=3.9e-28 Score=218.60 Aligned_cols=272 Identities=29% Similarity=0.397 Sum_probs=215.0
Q ss_pred EEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCC
Q 017916 45 LVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCP 124 (364)
Q Consensus 45 lV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 124 (364)
.|||.++++|+.|+....|.+ ..|.++|+|++|+|+.+|++++.|++||+|++.
T Consensus 1 ~i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~-------------------- 54 (288)
T smart00829 1 EVEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL-------------------- 54 (288)
T ss_pred CeeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE--------------------
Confidence 389999999999999887643 236789999999999999999999999999875
Q ss_pred CccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHH
Q 017916 125 EMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGA 201 (364)
Q Consensus 125 ~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la 201 (364)
..|+|++|+.++.++++++|+++++.+++.+. .+.++++++ +...+.+|++|+|+|+ |.+|++++++|
T Consensus 55 ---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a 125 (288)
T smart00829 55 ---------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLA 125 (288)
T ss_pred ---------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHH
Confidence 24899999999999999999999998888765 788899988 6688999999999986 99999999999
Q ss_pred HHCCCCEEEEEecChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC
Q 017916 202 RAFGAPRIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 279 (364)
Q Consensus 202 ~~~g~~~vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G 279 (364)
+.+|+ .+++++.++++.++++++|+ +.++++. ..++.+.+++.. .++++|+++|++| .......+++++++|
T Consensus 126 ~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~-~~~~~~~~~~l~~~g 199 (288)
T smart00829 126 QHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRAT--GGRGVDVVLNSLA-GEFLDASLRCLAPGG 199 (288)
T ss_pred HHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHh--CCCCcEEEEeCCC-HHHHHHHHHhccCCc
Confidence 99999 57777788889999999998 6666543 345666665543 2457999999999 578889999999999
Q ss_pred EEEEEcCCCC--CccccchhhhhcCcEEEeecc---------CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHH
Q 017916 280 KVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR---------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348 (364)
Q Consensus 280 ~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~ 348 (364)
+++.++.... ........ ..+++++.+... ..+.+.+++++++++++. +...+.|++ +++++++
T Consensus 200 ~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~ 274 (288)
T smart00829 200 RFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLR--PLPVTVFPI--SDVEDAF 274 (288)
T ss_pred EEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCcc--CcCceEEcH--HHHHHHH
Confidence 9999985421 11122222 234455444321 123467788899999874 334577888 9999999
Q ss_pred HHHhcCCCceEEEE
Q 017916 349 ETSARGGTAIKVMF 362 (364)
Q Consensus 349 ~~~~~~~~~gkvvv 362 (364)
+.+..+...||+++
T Consensus 275 ~~~~~~~~~~~ivv 288 (288)
T smart00829 275 RYMQQGKHIGKVVL 288 (288)
T ss_pred HHHhcCCCcceEeC
Confidence 99998877788774
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=3.5e-28 Score=218.42 Aligned_cols=246 Identities=30% Similarity=0.416 Sum_probs=196.4
Q ss_pred cCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCce
Q 017916 70 VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 149 (364)
Q Consensus 70 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 149 (364)
+..+|.++|+|++|+|+++|++++.|++||+|+++ +.|++|+.++.+++
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~ 65 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANLL 65 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHHe
Confidence 35689999999999999999999999999999875 46899999999999
Q ss_pred EECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CC
Q 017916 150 FKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-AD 228 (364)
Q Consensus 150 ~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~ 228 (364)
+++|+++++.+++.+..+.+||++++..++++|+++||+|+|.+|++++++|+++|++.+++++.++++.++++++| .+
T Consensus 66 ~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 145 (277)
T cd08255 66 VPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPAD 145 (277)
T ss_pred eECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCc
Confidence 99999999888876678889999988889999999999988999999999999999965888888999999999999 44
Q ss_pred eEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEee
Q 017916 229 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 308 (364)
Q Consensus 229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 308 (364)
.++.+.. .. ..+.++|++||+++........+++++++|+++.+|............+..+.+++.+.
T Consensus 146 ~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 213 (277)
T cd08255 146 PVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSS 213 (277)
T ss_pred cccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEee
Confidence 4433211 01 12568999999998778889999999999999999854332111112233455555554
Q ss_pred ccC-------------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcC-CCceEEEE
Q 017916 309 FRY-------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMF 362 (364)
Q Consensus 309 ~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv 362 (364)
... .+.+++++++++++.+ .+.+.+.|++ +++++|++.++++ ....|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 214 QVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence 321 2568899999999987 4556677888 9999999999877 56667764
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.96 E-value=1.6e-26 Score=196.95 Aligned_cols=282 Identities=17% Similarity=0.173 Sum_probs=215.6
Q ss_pred CCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCc
Q 017916 38 SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG----HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD 113 (364)
Q Consensus 38 ~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 113 (364)
++++++|+||..|.+..|.-...+....... --.|+.|| ..++|+|++. +.+++++||.|++.
T Consensus 34 ~~~s~~vlvknlYLS~DPymR~rM~~~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~--------- 100 (343)
T KOG1196|consen 34 PLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGI--------- 100 (343)
T ss_pred CCCCccEEeEeeeecCCHHHHhhccCCCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEe---------
Confidence 4688999999999999887655443222111 11133333 2678999885 55789999999976
Q ss_pred cccCCCCCCCCCccccccCCCCCcceeEEEecCCceE--ECCC--CCCccchh--hhhhhHHHHHHH-HHcCCCCCCEEE
Q 017916 114 HCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF--KLPD--NVSLEEGA--MCEPLSVGLHAC-RRANIGPETNVL 186 (364)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~lP~--~~~~~~aa--~~~~~~~a~~~l-~~~~~~~g~~VL 186 (364)
=+|.||.+++++... ++|. +++..... +-.+..|||.++ +.+..++|++|+
T Consensus 101 ----------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~ 158 (343)
T KOG1196|consen 101 ----------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVF 158 (343)
T ss_pred ----------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEE
Confidence 379999988875444 4433 33333332 224888999998 679999999999
Q ss_pred EEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916 187 IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (364)
Q Consensus 187 I~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~ 264 (364)
|.|| |++|+.+.|+|+.+|+ .|++...+++|.++++ ++|.+..+||.+. .++.+.+++. .+.++|+.||.+|
T Consensus 159 VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~---~P~GIDiYfeNVG- 232 (343)
T KOG1196|consen 159 VSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC---FPEGIDIYFENVG- 232 (343)
T ss_pred EeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh---CCCcceEEEeccC-
Confidence 9988 9999999999999999 7999999999999886 5799999998653 4777777765 3689999999999
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCC---CCc---cccchhhhhcCcEEEeeccC------CCcHHHHHHHHHcCCCCCCCc
Q 017916 265 NKTMSTALSATRAGGKVCLVGMGH---HEM---TVPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPL 332 (364)
Q Consensus 265 ~~~~~~~~~~l~~~G~~v~~g~~~---~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~~~~~~ 332 (364)
+..++..+..|+..||++.+|+-. .+. -..+..++.|++.+.++... .+.++.+..++++|+|.....
T Consensus 233 G~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ed 312 (343)
T KOG1196|consen 233 GKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVED 312 (343)
T ss_pred cHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehh
Confidence 688999999999999999999521 111 12334567888888886543 566788999999999954443
Q ss_pred eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
+. -+| |+.++||..|..+.+.||.++.+
T Consensus 313 i~--~Gl--en~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 313 IA--DGL--ENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred HH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence 33 247 99999999999999999999864
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.94 E-value=2.1e-26 Score=223.77 Aligned_cols=292 Identities=20% Similarity=0.248 Sum_probs=229.2
Q ss_pred CceEEEEecCC---CCCCCcEEEEEeeeeeCcccHhhhhhcccCCcc----CCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017916 27 NTLKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV----VKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (364)
Q Consensus 27 ~~~~~~~~~~p---~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 99 (364)
.+++..+.|.. +..++.=+.-|-|++||++|+-...|..+..-. ..-..++|-||+|+- +-|.
T Consensus 1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGR 1496 (2376)
T ss_pred cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCc
Confidence 57777776654 346777789999999999999888876433211 123478999999984 5699
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHc
Q 017916 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA 177 (364)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~ 177 (364)
||+++. ..-++++-+.++.+++|.+|.++..++|++.+ .+.|+|++| .++
T Consensus 1497 RvM~mv----------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG 1548 (2376)
T KOG1202|consen 1497 RVMGMV----------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRG 1548 (2376)
T ss_pred EEEEee----------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhc
Confidence 999873 23568889999999999999999999999998 889999998 679
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
..++|++||||++ |++|++||.+|.+.|+ .|+++..+.+|++++.++- ..++- ++.+.+|+..+. ..+.|
T Consensus 1549 ~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~--NSRdtsFEq~vl--~~T~G 1623 (2376)
T KOG1202|consen 1549 QMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFA--NSRDTSFEQHVL--WHTKG 1623 (2376)
T ss_pred cccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccc--ccccccHHHHHH--HHhcC
Confidence 9999999999965 9999999999999999 6788889999999887543 22322 355567776664 45668
Q ss_pred CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccc-hhhhhcCcEEEeeccC------CCcHHHHHHHHHcC
Q 017916 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY------KNTWPLCLELLRSG 325 (364)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g 325 (364)
+|+|+|++... .+-++..++||+-+|||..+|-.....+.++ .....++.+++|.... .+.+.++..++++|
T Consensus 1624 rGVdlVLNSLa-eEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eG 1702 (2376)
T KOG1202|consen 1624 RGVDLVLNSLA-EEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEG 1702 (2376)
T ss_pred CCeeeehhhhh-HHHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhh
Confidence 99999999988 8899999999999999999983322222233 3456788888887543 44567777777664
Q ss_pred CCC--CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916 326 KID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364 (364)
Q Consensus 326 ~~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 364 (364)
--. .+|+...+|+- .++++||+.|.+++..||+|+++
T Consensus 1703 IksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1703 IKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred hccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence 221 37888888877 99999999999999999999974
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=4.8e-23 Score=157.91 Aligned_cols=109 Identities=39% Similarity=0.702 Sum_probs=97.0
Q ss_pred CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCC
Q 017916 41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120 (364)
Q Consensus 41 ~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~ 120 (364)
|+||+|||++++||++|++.+.|. ......+|.++|||++|+|+++|+++++|++||+|+..+...|..|.+|..+..
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 799999999999999999999884 223468899999999999999999999999999999998888999999999999
Q ss_pred CCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017916 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152 (364)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~l 152 (364)
++|.+...++.. .+|+|+||+.+++++++++
T Consensus 79 ~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence 999998888764 8999999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.70 E-value=3.5e-16 Score=123.89 Aligned_cols=128 Identities=30% Similarity=0.580 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHH
Q 017916 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA 271 (364)
Q Consensus 192 ~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~ 271 (364)
++|++++|+|+.+|+ .|++++.+++|.++++++|++++++++. .++.+.++++.. +.++|++|||+|+++.++.+
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~--~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTG--GRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTT--TSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccc--cccceEEEEecCcHHHHHHH
Confidence 589999999999996 8999999999999999999999988654 568888888753 35899999999999999999
Q ss_pred HHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccCC-CcHHHHHHHHHc
Q 017916 272 LSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRS 324 (364)
Q Consensus 272 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 324 (364)
+++++++|+++.+|... ....++...++.+++++.++.... ++++++++++.+
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 99999999999999876 566788888999999999999884 888999988864
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.40 E-value=2.2e-11 Score=113.11 Aligned_cols=172 Identities=19% Similarity=0.276 Sum_probs=134.3
Q ss_pred HHHHH-HHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916 170 GLHAC-RRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 170 a~~~l-~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
.+.++ +..+ ..+|++|+|.|+|.+|+.+++.++.+|+ .|++++.++.|.+.++.+|+..+ + ..+ .
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e----~ 254 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEE----A 254 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHH----H
Confidence 44555 3333 4689999999999999999999999999 67889999999999999998432 1 111 1
Q ss_pred HHHcCCCccEEEECCCCHHHHHHH-HHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCC--cHH--HHHHHH
Q 017916 248 QKAMGTGIDVSFDCAGFNKTMSTA-LSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN--TWP--LCLELL 322 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~l 322 (364)
. .++|++|+|+|+...+... ++.++++|+++.+|.. +..++...+..+.+++.+...+.. .++ +.+.++
T Consensus 255 v----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LL 328 (413)
T cd00401 255 V----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILL 328 (413)
T ss_pred H----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhh
Confidence 1 3589999999988888865 9999999999999854 446777778889999999887732 455 799999
Q ss_pred HcCCC-CCCCceEEE-----eeCChh-hHHHHHHHHhcCCC-ceEEEE
Q 017916 323 RSGKI-DVKPLVTHR-----FGFSQK-EVEEAFETSARGGT-AIKVMF 362 (364)
Q Consensus 323 ~~g~~-~~~~~~~~~-----~~~~~~-~~~~a~~~~~~~~~-~gkvvv 362 (364)
.+|.+ ++.+.+++. |+| + ++.++++.+.++.. .-|+++
T Consensus 329 a~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~ 374 (413)
T cd00401 329 AEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF 374 (413)
T ss_pred hCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence 99999 777666666 777 7 99999999887643 245654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.39 E-value=1.1e-11 Score=118.03 Aligned_cols=155 Identities=17% Similarity=0.266 Sum_probs=114.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCC-----------cccHHHHHHH
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTN-----------LQDIAEEVEK 246 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~-----------~~~~~~~i~~ 246 (364)
..++++|+|.|+|.+|+++++.|+.+|+ .|++++.++++.+.++++|++.+ ++..+. ++++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 79999999999999999999854 432211 1122222222
Q ss_pred HHHHcCCCccEEEECCCCH-----HH-HHHHHHhcccCCEEEEEcCC-CCC--ccccchhhhh-cCcEEEeeccCCCcHH
Q 017916 247 IQKAMGTGIDVSFDCAGFN-----KT-MSTALSATRAGGKVCLVGMG-HHE--MTVPLTPAAV-REVDVVGVFRYKNTWP 316 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~ 316 (364)
......+++|++|+|+|.+ .. .+++++.++++|++++++.. .+. ...+...++. +++++.|.+..+..+.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p 320 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP 320 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence 2221125799999999963 35 48999999999999999864 332 3344445565 8999999887765555
Q ss_pred -HHHHHHHcCCCCCCCceE
Q 017916 317 -LCLELLRSGKIDVKPLVT 334 (364)
Q Consensus 317 -~~~~~l~~g~~~~~~~~~ 334 (364)
++.+++.++.+++.+.++
T Consensus 321 ~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 321 TQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHhCCccHHHHhc
Confidence 599999999886555544
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.34 E-value=7.4e-13 Score=104.32 Aligned_cols=117 Identities=27% Similarity=0.391 Sum_probs=79.5
Q ss_pred cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC--CHHHHHHHHHhcccCCEEEEEcCCCCCccccchh--hhh
Q 017916 225 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--AAV 300 (364)
Q Consensus 225 lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~ 300 (364)
||++++++|.. +++ ..++++|+|||++| ....+..++++| ++|+++.++. ...... ...
T Consensus 1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence 68999999863 344 23679999999999 655557777888 9999999873 111111 112
Q ss_pred cCcEEEeecc------CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916 301 REVDVVGVFR------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362 (364)
Q Consensus 301 ~~~~~~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 362 (364)
..++...... ..+.++++.+++++|++ +|.+.++|+| +++.+|++.++++...||+|+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence 2333333331 23459999999999999 8889999999 999999999999999999996
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.55 E-value=1e-06 Score=84.09 Aligned_cols=130 Identities=18% Similarity=0.238 Sum_probs=90.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-------------cccHHHHHHH
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-------------LQDIAEEVEK 246 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~~~~i~~ 246 (364)
.++++|+|.|+|.+|++++++|+.+|+ .|++++.+.++.+.++++|++.+. ++.. ++++.+...+
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~-v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccccceeecCHHHHHHHHH
Confidence 467999999999999999999999999 588889999999999999987532 2211 1233333333
Q ss_pred HHHHcCCCccEEEECC---CCHH---HHHHHHHhcccCCEEEEEcCC-CCCcccc--chhhh-hcCcEEEeeccC
Q 017916 247 IQKAMGTGIDVSFDCA---GFNK---TMSTALSATRAGGKVCLVGMG-HHEMTVP--LTPAA-VREVDVVGVFRY 311 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~-~~~~~~~--~~~~~-~~~~~~~~~~~~ 311 (364)
.......++|++|+|+ |.+. ...++++.+++|+.+++++.. ++..... ...+. ..++++.+....
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~nl 314 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTDL 314 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCCc
Confidence 3333346799999999 6433 566789999999999999743 2222221 11122 234777776654
No 133
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.54 E-value=5.9e-06 Score=73.67 Aligned_cols=255 Identities=13% Similarity=0.109 Sum_probs=146.4
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEEcCC----cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceE
Q 017916 75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG----ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 150 (364)
Q Consensus 75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 150 (364)
.+|-..+ ++|++ +.+.++.+|.||+++.. ...+..+.-..+.....+|+. .....|.+|.++..+..+
T Consensus 32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~-----~l~~~YN~Y~r~~~d~~y 103 (314)
T PF11017_consen 32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRA-----GLPPIYNQYLRVSADPAY 103 (314)
T ss_pred ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhC-----cCchhhhceeecCCCccc
Confidence 3455555 56655 78889999999999742 112222222222333333332 233567788877766554
Q ss_pred ECCCCCCccchhhhhhhHHHHHHHHH---cCCCCCCEEEEEcC-CHHHHHHHHHHH-HCCCCEEEEEecChhHHHHHHHc
Q 017916 151 KLPDNVSLEEGAMCEPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAR-AFGAPRIVIVDVDDYRLSVAKEL 225 (364)
Q Consensus 151 ~lP~~~~~~~aa~~~~~~~a~~~l~~---~~~~~g~~VLI~Ga-g~~G~~ai~la~-~~g~~~vv~~~~~~~~~~~~~~l 225 (364)
.- ......+.+-+.+.|+|..-+. .+.-..+.|+|.+| +-+++..+..++ ..+.-.+++++ |..+.++.+.+
T Consensus 104 ~~--~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~l 180 (314)
T PF11017_consen 104 DP--EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESL 180 (314)
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhcc
Confidence 21 1121223333577788865432 22334467788887 788888888887 55555788885 66667799999
Q ss_pred CC-CeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC-EEEEEcCCCCCcc-----------
Q 017916 226 GA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGMGHHEMT----------- 292 (364)
Q Consensus 226 g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~~~~----------- 292 (364)
|+ +.++.|++ +..+. ...--+++|..|+.+....+..++...= +.+.+|.+..+..
T Consensus 181 g~Yd~V~~Yd~--------i~~l~---~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~ 249 (314)
T PF11017_consen 181 GCYDEVLTYDD--------IDSLD---APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRP 249 (314)
T ss_pred CCceEEeehhh--------hhhcc---CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCc
Confidence 97 56777754 33331 2456788999999988888888887653 4556664332211
Q ss_pred --ccchhhhhcCcEEEeeccCCCcHHHH-HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCC
Q 017916 293 --VPLTPAAVREVDVVGVFRYKNTWPLC-LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 355 (364)
Q Consensus 293 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 355 (364)
++....+.+.+.-.|...+.+.+.+. .++++.. . ....+...-+. +.+.++++.+.+++
T Consensus 250 ~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~-~-~wl~~~~~~G~--ea~~~~y~~l~~G~ 311 (314)
T PF11017_consen 250 EFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADA-Q-PWLKVEEVAGP--EAVEAAYQDLLAGK 311 (314)
T ss_pred EEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh-c-CcEEEEEecCH--HHHHHHHHHHhcCC
Confidence 11112222333333332222222222 2333322 1 13345566677 99999999998774
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.49 E-value=1.7e-06 Score=77.48 Aligned_cols=173 Identities=17% Similarity=0.236 Sum_probs=106.1
Q ss_pred HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 017916 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
.+.+++|++||..|+|. |..+.++++..|.. .|++++.+++..+.+++. +...+.... .+ +..+. .
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~-~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALP-V 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCC-C
Confidence 46788999999999877 88888888887764 699999999988887763 433221111 12 11111 1
Q ss_pred cCCCccEEEECC------CCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEee-ccCCCcHHHHHHHHH
Q 017916 251 MGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLELLR 323 (364)
Q Consensus 251 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 323 (364)
..+.+|+|+... .....+.++++.|+|+|+++..+..... .......+...+.+. ........++.++++
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 219 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG---ELPEEIRNDAELYAGCVAGALQEEEYLAMLA 219 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC---CCCHHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence 134799998543 2356889999999999999987643221 111222222222211 112345667778887
Q ss_pred cCCCC-CCCceEEEeeCChhhHHHHHHHH--hcCCCceEEEE
Q 017916 324 SGKID-VKPLVTHRFGFSQKEVEEAFETS--ARGGTAIKVMF 362 (364)
Q Consensus 324 ~g~~~-~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvvv 362 (364)
+..+. ........+.+ +++.++++.+ ..+...++.+.
T Consensus 220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceEE
Confidence 74442 22223345667 8888999888 55544455443
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.24 E-value=2.5e-05 Score=73.29 Aligned_cols=103 Identities=21% Similarity=0.287 Sum_probs=78.5
Q ss_pred HHHHHHHHc-CCC-CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 017916 169 VGLHACRRA-NIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246 (364)
Q Consensus 169 ~a~~~l~~~-~~~-~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~ 246 (364)
.+|.++.++ ++. .|++|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+. +.+ +.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-----------l~e 263 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-----------MEE 263 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-----------HHH
Confidence 356666544 544 89999999999999999999999999 688888888776666666654 211 112
Q ss_pred HHHHcCCCccEEEECCCCHHHHH-HHHHhcccCCEEEEEcCCC
Q 017916 247 IQKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 288 (364)
.. .++|++|+++|....+. ..+..+++++.++..|...
T Consensus 264 al----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 264 AA----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred HH----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 21 36899999999877776 6889999999999988544
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.22 E-value=8.6e-05 Score=67.00 Aligned_cols=114 Identities=17% Similarity=0.183 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.+.+|+|.|.|.+|+++++.++.+|+ .|.+++++.++.+.++.+|+..+ .+ .+ +.+. -.++|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~----l~~~----l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SE----LAEE----VGKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HH----HHHH----hCCCCEEEE
Confidence 58999999999999999999999999 78888888888888888886532 11 11 2222 146999999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeecc
Q 017916 261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 310 (364)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (364)
|+...-.....++.+++++.+++++...+...+ .....++++..+...
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~~~ 264 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLAPG 264 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEECC
Confidence 987543445778899999999999865544433 334456667665443
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.21 E-value=6.1e-05 Score=66.41 Aligned_cols=132 Identities=22% Similarity=0.324 Sum_probs=84.6
Q ss_pred CcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 136 g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
.+|.+|.. +....+.+++++++..+.-..+. .....+.. .+.++++||-.|+|. |..++.+++ .|+..+++++.+
T Consensus 77 p~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 77 PSWEDPPD-PDEINIELDPGMAFGTGTHPTTR-LCLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CCCcCCCC-CCeEEEEECCCCccCCCCCHHHH-HHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 45566644 66788899998888776522211 12223322 256889999999876 877776544 677679999999
Q ss_pred hhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCH---HHHHHHHHhcccCCEEEEEcCC
Q 017916 216 DYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG 287 (364)
Q Consensus 216 ~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 287 (364)
+...+.+++. +....+.... ....+|+|+...... ..+..+.+.|+++|+++..+..
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 9887776642 2211111000 011589998765532 3456788899999999987643
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.12 E-value=9.6e-06 Score=73.85 Aligned_cols=108 Identities=25% Similarity=0.312 Sum_probs=81.0
Q ss_pred CceEECCCCCCccchhhhhhhHHHHHHHHHcCC----CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHH-HH
Q 017916 147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI----GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SV 221 (364)
Q Consensus 147 ~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~----~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~ 221 (364)
...+++|+.+..+.+....+.++++++++.+.. -++.+|+|.|+|.+|..+++.++..|+..|++++++.++. ++
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 456778899998888877778888888754332 4789999999999999999999988887888888887764 67
Q ss_pred HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHH
Q 017916 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267 (364)
Q Consensus 222 ~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~ 267 (364)
++++|.. +.++ .+ +.+.. ...|+||.|++++..
T Consensus 219 a~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence 7888873 3221 11 22221 358999999997655
No 139
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.02 E-value=0.00013 Score=68.05 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=76.8
Q ss_pred HHHHHHH-cC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916 170 GLHACRR-AN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 170 a~~~l~~-~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
++.++.+ .+ ...|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+...+...|+. +.+ ..+ .
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------lee----a 247 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEE----A 247 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHH----H
Confidence 4444433 33 4689999999999999999999999999 588888888777666666763 211 111 1
Q ss_pred HHHcCCCccEEEECCCCHHHHHH-HHHhcccCCEEEEEcCCC
Q 017916 248 QKAMGTGIDVSFDCAGFNKTMST-ALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 288 (364)
. .+.|++|++.|....+.. .+..+++++.++..|...
T Consensus 248 l----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 248 A----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred H----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 1 357999999998887774 889999999999988543
No 140
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.97 E-value=0.0001 Score=61.76 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=80.3
Q ss_pred hhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh----HHHHHHHcCCCeEEec-CC
Q 017916 161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY----RLSVAKELGADNIVKV-ST 235 (364)
Q Consensus 161 aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~----~~~~~~~lg~~~~~~~-~~ 235 (364)
.-+++.......+++...+++|++||-.|+|. |..++-+|+..+ .|+.++..++ ....++.+|..++... .+
T Consensus 52 gqtis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD 128 (209)
T COG2518 52 GQTISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD 128 (209)
T ss_pred CceecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence 33444333344466889999999999999876 999999999988 6899988776 3344667887654332 22
Q ss_pred CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916 236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
...-|. ...+||.|+-+.+.++.-..+++.|+++|+++.-
T Consensus 129 G~~G~~---------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 129 GSKGWP---------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred cccCCC---------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 222211 1368999998877677778899999999999875
No 141
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.87 E-value=7.8e-07 Score=84.20 Aligned_cols=159 Identities=20% Similarity=0.244 Sum_probs=101.3
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEE---
Q 017916 75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK--- 151 (364)
Q Consensus 75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~--- 151 (364)
..-|.|+++.+.+|+++.++. |++.+.. |+.|++|+. .|.+.+..+ ...++.|++++.++. .+..
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~-----V~GE~qI-~gQvk~a~~----~a~~~~~~g-~~l~~lf~~a~~~~k-~vr~~t~ 155 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSM-----VVGETQI-LGQVKNAYK----VAQEEKTVG-KVLERLFQKAFSVGK-RVRTETD 155 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhh-----hcCChHH-HHHHHHHHH----HHHHcCCch-HHHHHHHHHHHHHhh-hhhhhcC
Confidence 357889999999999998774 4444444 677887742 333333332 235678999887765 2222
Q ss_pred C-CCCCCccchhhhhhhHHHHH-HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC
Q 017916 152 L-PDNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD 228 (364)
Q Consensus 152 l-P~~~~~~~aa~~~~~~~a~~-~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~ 228 (364)
+ +..++...+ |.. +.+.....++++|+|.|+|.+|..+++.++..|+..+++++++.++.. +++.+|..
T Consensus 156 i~~~~vSv~~~--------Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~ 227 (417)
T TIGR01035 156 ISAGAVSISSA--------AVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE 227 (417)
T ss_pred CCCCCcCHHHH--------HHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe
Confidence 2 112221111 111 123344467899999999999999999999999778888888877754 66777754
Q ss_pred eEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHH
Q 017916 229 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266 (364)
Q Consensus 229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~ 266 (364)
.+.+ .+ +.+.. .++|+||+|++++.
T Consensus 228 -~i~~----~~----l~~~l----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 228 -AVKF----ED----LEEYL----AEADIVISSTGAPH 252 (417)
T ss_pred -EeeH----HH----HHHHH----hhCCEEEECCCCCC
Confidence 2221 11 21111 36899999998754
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.85 E-value=0.00033 Score=65.26 Aligned_cols=96 Identities=24% Similarity=0.323 Sum_probs=66.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
++.+|+|.|+|.+|+.+++.++.+|+ .|++++.+.++.+.+. .++......+. . .+.+.+.. .++|++|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~-~----~~~l~~~l----~~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS-N----AYEIEDAV----KRADLLI 235 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC-C----HHHHHHHH----ccCCEEE
Confidence 34569999999999999999999999 5888888888776654 45543222211 1 11222222 3689999
Q ss_pred ECCC---C--HH-HHHHHHHhcccCCEEEEEcC
Q 017916 260 DCAG---F--NK-TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 260 d~~g---~--~~-~~~~~~~~l~~~G~~v~~g~ 286 (364)
+|++ . +. .....++.+++++.+++++.
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~ 268 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI 268 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence 9973 2 11 23677888999999999874
No 143
>PLN02494 adenosylhomocysteinase
Probab=97.76 E-value=0.00043 Score=65.41 Aligned_cols=100 Identities=17% Similarity=0.271 Sum_probs=75.7
Q ss_pred HHHH-HHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916 171 LHAC-RRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 171 ~~~l-~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
+.++ +..+ .-.|++|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+..+ +..+ +.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leE----al 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLED----VV 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHH----HH
Confidence 4455 3333 3679999999999999999999999999 68888888877666666676421 1111 21
Q ss_pred HHcCCCccEEEECCCCHHHH-HHHHHhcccCCEEEEEcCC
Q 017916 249 KAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVGMG 287 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~ 287 (364)
...|++|++.|....+ ...++.|++++.++.+|..
T Consensus 308 ----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 308 ----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred ----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 2579999999976654 7899999999999999863
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.62 E-value=4.8e-05 Score=75.29 Aligned_cols=82 Identities=23% Similarity=0.385 Sum_probs=56.7
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC---------------------hhHHHHHHHcCCCeEEecCCC
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD---------------------DYRLSVAKELGADNIVKVSTN 236 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~---------------------~~~~~~~~~lg~~~~~~~~~~ 236 (364)
..++|++|+|.|+|+.|+++++.++..|++ |++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 367899999999999999999999999995 6667632 34566778899875544211
Q ss_pred cccHHHHHHHHHHHcCCCccEEEECCCCHHH
Q 017916 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267 (364)
Q Consensus 237 ~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~ 267 (364)
..+.. .... ..++|++|+++|+...
T Consensus 211 ~~~~~--~~~~----~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 211 GEDIT--LEQL----EGEFDAVFVAIGAQLG 235 (564)
T ss_pred CCcCC--HHHH----HhhCCEEEEeeCCCCC
Confidence 01211 1111 2368999999997543
No 145
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.59 E-value=0.00016 Score=68.75 Aligned_cols=160 Identities=19% Similarity=0.274 Sum_probs=98.1
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC
Q 017916 75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154 (364)
Q Consensus 75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~ 154 (364)
..-|+|+++.+.+|+++.++.-+|+.=+ |+.|+.. ...|.+.+..+ ...++.|+++ +++|+
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~a----~~~a~~~g~~g-~~l~~lf~~a--------~~~~k 150 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKDA----YALAQEAGTVG-TILNRLFQKA--------FSVAK 150 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHHH----HHHHHHcCCch-HHHHHHHHHH--------HHHHh
Confidence 4579999999999999988866666432 1222211 11111111111 0123444443 33444
Q ss_pred CCCccchhhhhhhHHHHHHHHHcC----CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe
Q 017916 155 NVSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN 229 (364)
Q Consensus 155 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~ 229 (364)
.+..+.+..-.+.++++++++.+. -.++.+|+|.|+|.+|.++++.++..|+..+++++++.++.. +++.+|..
T Consensus 151 ~v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~- 229 (423)
T PRK00045 151 RVRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE- 229 (423)
T ss_pred hHhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-
Confidence 444444433346666777775432 257899999999999999999999999878888888887754 67778753
Q ss_pred EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHH
Q 017916 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266 (364)
Q Consensus 230 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~ 266 (364)
++.+ .+ ..+. -.++|+||+|++++.
T Consensus 230 ~~~~----~~----~~~~----l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 230 AIPL----DE----LPEA----LAEADIVISSTGAPH 254 (423)
T ss_pred EeeH----HH----HHHH----hccCCEEEECCCCCC
Confidence 2221 11 1111 136899999998754
No 146
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.56 E-value=0.0019 Score=54.79 Aligned_cols=103 Identities=20% Similarity=0.369 Sum_probs=71.2
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcC-CCeEEecCCCcccHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELG-ADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~i~~~ 247 (364)
+....+.++++||..|+|. |..++.+|+..+. ..+++++.+++..+.++ .++ ...+.... .+..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~- 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT- 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-
Confidence 4567889999999999877 8888899887643 47999999988877554 456 33332221 122222221
Q ss_pred HHHcCCCccEEEECCCC---HHHHHHHHHhcccCCEEEEE
Q 017916 248 QKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~ 284 (364)
....+|.||...+. .+.+..+.+.|+|+|+++..
T Consensus 108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 23579999985542 45777889999999999864
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=97.52 E-value=0.0012 Score=66.86 Aligned_cols=140 Identities=23% Similarity=0.280 Sum_probs=84.8
Q ss_pred CcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec
Q 017916 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV 214 (364)
Q Consensus 136 g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~ 214 (364)
-++++|..+++..++.+ +.++.++|..... -.....+|+++||+|+ |.+|.+.++.+...|+ .|+.+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~--------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM--------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC--------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence 45667777777777766 5555555542100 0122346899999997 9999999999999999 6777777
Q ss_pred ChhHHHHH-HHcCC--C-eEEecCC-CcccHHHHHHHHHHHcCCCccEEEECCCC-------------------------
Q 017916 215 DDYRLSVA-KELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGF------------------------- 264 (364)
Q Consensus 215 ~~~~~~~~-~~lg~--~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~------------------------- 264 (364)
+.++.+.+ +.++. . ..+..+- ...++.+.+...... .+++|++|+++|.
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 77665543 33443 1 1222221 122333333333222 3479999999982
Q ss_pred HHHHHHHHHhccc---CCEEEEEcC
Q 017916 265 NKTMSTALSATRA---GGKVCLVGM 286 (364)
Q Consensus 265 ~~~~~~~~~~l~~---~G~~v~~g~ 286 (364)
....+.+++.+++ +|+++.++.
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS 558 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIAS 558 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECC
Confidence 1233445666655 588988874
No 148
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.46 E-value=0.0029 Score=56.84 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=75.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|+|.|.|.+|.++++.++.+|+ .|.+.+++.++...+..+|...+ .+ .+ +.+. -.+.|++|+
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~----l~~~----l~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NK----LEEK----VAEIDIVIN 215 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HH----HHHH----hccCCEEEE
Confidence 47899999999999999999999999 67788888777666666665321 11 11 2222 147899999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEe
Q 017916 261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307 (364)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 307 (364)
++...-.-...++.++++..++.++.......+ ...-.++++...
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~~ 260 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKALL 260 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEEE
Confidence 987432234577888988888888765544333 444455555553
No 149
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.34 E-value=0.0016 Score=61.71 Aligned_cols=92 Identities=21% Similarity=0.299 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.-.|.+|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. . ++ .++. ...|++
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~l----eell----~~ADIV 313 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TL----EDVV----ETADIF 313 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cH----HHHH----hcCCEE
Confidence 4579999999999999999999999999 6788877766654444556532 1 11 1221 368999
Q ss_pred EECCCCHHHHH-HHHHhcccCCEEEEEcCC
Q 017916 259 FDCAGFNKTMS-TALSATRAGGKVCLVGMG 287 (364)
Q Consensus 259 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 287 (364)
+.+.|....+. ..++.|++++.++.+|..
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 99999777665 799999999999998854
No 150
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.34 E-value=0.0042 Score=51.05 Aligned_cols=102 Identities=22% Similarity=0.324 Sum_probs=71.0
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
....+++|+.++=.|+|. |..++++|+.-...++++++.++++.++. ++||.+.+.......+ +.+..
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap---~~L~~---- 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP---EALPD---- 99 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch---HhhcC----
Confidence 557789999877778754 66788888655555899999999887665 4588876554433222 22211
Q ss_pred cCCCccEEEECCC--CHHHHHHHHHhcccCCEEEEEc
Q 017916 251 MGTGIDVSFDCAG--FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 251 ~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g 285 (364)
-..+|.+|--=| -.+.++.+|..|+++|+++.-.
T Consensus 100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 126899885322 2578889999999999999754
No 151
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.26 E-value=0.0043 Score=56.49 Aligned_cols=103 Identities=24% Similarity=0.310 Sum_probs=72.5
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
.++...++++++||..|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+.... .|..+.+..
T Consensus 72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~- 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE- 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc-
Confidence 3456778899999999987 48999999998764 36889999887665544 46665443321 222221111
Q ss_pred HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
...+|+|+.+.+........++.|+++|+++..
T Consensus 147 ----~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 147 ----FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ----cCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 246999999888666667789999999998763
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.0098 Score=51.72 Aligned_cols=104 Identities=21% Similarity=0.216 Sum_probs=64.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC---CCeEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG---ADNIVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg---~~~~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
.+++|||+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ +.+. ....+..+- ..+++.+.++..... -++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 4679999998 9999999999999999 567777777665544 3332 222222221 122333333332221 246
Q ss_pred ccEEEECCCCH-----------------------HHHHHHHHhcccCCEEEEEcC
Q 017916 255 IDVSFDCAGFN-----------------------KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 255 ~d~vid~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+|.++.+.|.. ...+..+..++++|+++.++.
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 136 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSS 136 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEec
Confidence 89999888731 123445566677888888874
No 153
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.25 E-value=0.0032 Score=55.27 Aligned_cols=84 Identities=26% Similarity=0.324 Sum_probs=57.0
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC----CC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG----AD-NIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg----~~-~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
..+.++||+|| +++|...+..+...|+ .++.+.++.+|.+.+ +++. .. .++..|-...+-.+.+.+.....+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 46789999999 9999999999999999 577777888887654 3443 21 244444333333333333333334
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
..+|+.|+++|-
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 589999999984
No 154
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.23 E-value=0.0032 Score=56.69 Aligned_cols=96 Identities=19% Similarity=0.297 Sum_probs=62.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADN-IVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
.+++++||-.|+|. |..++.+++ +|+..+++++.++...+.+++. +... +..... +. . .....
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~~----~---~~~~~ 224 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---YL----E---QPIEG 224 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---cc----c---cccCC
Confidence 45789999999876 777766665 5777899999998877666542 2221 111111 10 0 01135
Q ss_pred CccEEEECCCCH---HHHHHHHHhcccCCEEEEEcC
Q 017916 254 GIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 254 ~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 286 (364)
++|+|+...... ..+..+.+.|+|+|+++..|.
T Consensus 225 ~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 225 KADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred CceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 799998755422 455677899999999998764
No 155
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.19 E-value=0.0014 Score=55.85 Aligned_cols=103 Identities=22% Similarity=0.273 Sum_probs=67.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHH----HHHcCCCeEEecC-CCcccHHHHHH
Q 017916 172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSV----AKELGADNIVKVS-TNLQDIAEEVE 245 (364)
Q Consensus 172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~----~~~lg~~~~~~~~-~~~~~~~~~i~ 245 (364)
.+++...+++|++||-.|+|. |..++-+++..|.. .|++++..++-.+. ++.++...+.... +....
T Consensus 63 ~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g------ 135 (209)
T PF01135_consen 63 RMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEG------ 135 (209)
T ss_dssp HHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGT------
T ss_pred HHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhc------
Confidence 356778899999999999765 88888999888764 48888877754433 4456765432211 11111
Q ss_pred HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
+. ...+||.|+-+.+.++.-...++.|++||+++..
T Consensus 136 -~~--~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 136 -WP--EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -TG--GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred -cc--cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 11 1357999998888777777899999999999974
No 156
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.16 E-value=0.012 Score=45.28 Aligned_cols=102 Identities=24% Similarity=0.335 Sum_probs=67.8
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
....++++++||-.|+|. |..+..+++..+...+++++.++...+.++ .++...+..... +.......
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~---- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED---- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence 456677888999999866 888889998876568999999888776654 344432221111 11000111
Q ss_pred cCCCccEEEECCCC---HHHHHHHHHhcccCCEEEEE
Q 017916 251 MGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 251 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~ 284 (364)
....+|+|+...+. .+.++.+.+.|+++|+++..
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 13579999875432 34778899999999998864
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0043 Score=55.52 Aligned_cols=81 Identities=17% Similarity=0.258 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.+.+|||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+...+...+ .|+. ..+++.+.+.......++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYA-EPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCC-CHHHHHHHHHHHHHHcCCCccEE
Confidence 4578999998 9999999999888999 57777787777766665554432 2221 22333333444333334579999
Q ss_pred EECCC
Q 017916 259 FDCAG 263 (364)
Q Consensus 259 id~~g 263 (364)
|+++|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 158
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.10 E-value=0.0035 Score=49.55 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC--eEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
-.+.++||.|+|+.|.+++..+...|++.+.++.++.+|.+.+ +.++.. ..+.+++ +. .. -..+|
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~----~~----~~~~D 77 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LE----EA----LQEAD 77 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HC----HH----HHTES
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HH----HH----HhhCC
Confidence 3588999999999999999999999999899999988876544 566432 2333322 11 11 13699
Q ss_pred EEEECCCCH
Q 017916 257 VSFDCAGFN 265 (364)
Q Consensus 257 ~vid~~g~~ 265 (364)
++|+|++.+
T Consensus 78 ivI~aT~~~ 86 (135)
T PF01488_consen 78 IVINATPSG 86 (135)
T ss_dssp EEEE-SSTT
T ss_pred eEEEecCCC
Confidence 999998864
No 159
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.07 E-value=0.012 Score=50.41 Aligned_cols=103 Identities=19% Similarity=0.243 Sum_probs=69.1
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
.++...++++++||-.|+|. |..+..+++..+. ..|++++.+++-.+.+++ +|...+..... |.... +
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g---d~~~~---~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG---DGTLG---Y 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccC---C
Confidence 44667889999999998765 7778888887764 379999998877766543 45432211111 10000 0
Q ss_pred HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
. ....+|+|+-..........+++.|+++|+++..
T Consensus 141 ~--~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 E--ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred C--cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 0 1357999976555566777899999999998875
No 160
>PRK12742 oxidoreductase; Provisional
Probab=97.05 E-value=0.013 Score=50.97 Aligned_cols=79 Identities=22% Similarity=0.239 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
++.+|||+|+ |.+|.+.++.+...|+++++...++.++.+ +..+++... +..+-. +.. .+.++.+. .+++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~-~~~D~~--~~~-~~~~~~~~-~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA-VQTDSA--DRD-AVIDVVRK-SGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeE-EecCCC--CHH-HHHHHHHH-hCCCcEE
Confidence 4689999998 999999999999999954333333444433 334556542 222222 211 23333222 2469999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|+++|.
T Consensus 80 i~~ag~ 85 (237)
T PRK12742 80 VVNAGI 85 (237)
T ss_pred EECCCC
Confidence 999874
No 161
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=97.01 E-value=0.0071 Score=53.33 Aligned_cols=131 Identities=16% Similarity=0.240 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC---------CCcccHHHHHHHHHHH
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS---------TNLQDIAEEVEKIQKA 250 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~---------~~~~~~~~~i~~~~~~ 250 (364)
-++.++|+.|.|..|++++..++..|+ .|..-+....+.+..+.+|+...-.-+ .-+++|.+.-.++...
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 466788999999999999999999999 666666777888888888865321111 1234555544444444
Q ss_pred cCCCccEEEECCCC-----H-HHHHHHHHhcccCCEEEEEcCC-CCCc--cccchhhhhcCcEEEeeccC
Q 017916 251 MGTGIDVSFDCAGF-----N-KTMSTALSATRAGGKVCLVGMG-HHEM--TVPLTPAAVREVDVVGVFRY 311 (364)
Q Consensus 251 ~~~~~d~vid~~g~-----~-~~~~~~~~~l~~~G~~v~~g~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 311 (364)
.-.++|+||-+.-. + -....+...|+||+.++++... +++. ..+-.-...++++++|..+.
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl 310 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL 310 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence 45789999987642 1 3445799999999999999732 2222 22223456788999997765
No 162
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.98 E-value=0.0075 Score=50.16 Aligned_cols=81 Identities=23% Similarity=0.325 Sum_probs=57.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC---eEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
.|.+|||+|+ +++|++.++-...+|- .|+++.++.++.+.++..... .+.|. .+.+-...+-+|.+..-...+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv--~d~~~~~~lvewLkk~~P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDV--ADRDSRRELVEWLKKEYPNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecc--cchhhHHHHHHHHHhhCCchh
Confidence 4789999976 9999999998889998 678888899998888764432 23332 223333344445444445689
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++++++|-
T Consensus 81 vliNNAGI 88 (245)
T COG3967 81 VLINNAGI 88 (245)
T ss_pred eeeecccc
Confidence 99998874
No 163
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.92 E-value=0.0043 Score=47.02 Aligned_cols=94 Identities=28% Similarity=0.393 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHc----CC-CeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKEL----GA-DNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
||.+||-.|+|. |..++.+++. .++ .+++++.+++..+.+++. +. ..+..+. .++ . .......+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~----~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-E----FDPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-H----GGTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-c----cCcccCCC
Confidence 688999999765 7788888885 566 799999999888877652 22 2222111 222 1 11112457
Q ss_pred ccEEEECC-CC---H------HHHHHHHHhcccCCEEEEE
Q 017916 255 IDVSFDCA-GF---N------KTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 255 ~d~vid~~-g~---~------~~~~~~~~~l~~~G~~v~~ 284 (364)
+|+|+... .. . ..++.+.+.|+|+|+++.-
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999866 21 1 2478899999999998863
No 164
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.88 E-value=0.019 Score=49.38 Aligned_cols=103 Identities=19% Similarity=0.222 Sum_probs=67.3
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
.++...++++++||-.|+|. |..++.+++..+. ..|++++.+++..+.++ ++|.+.+..... +..+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~--- 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW--- 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC---
Confidence 44667789999999998755 6677788887653 25899998887766554 345543221111 111100
Q ss_pred HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
. ....||+|+-..........+.+.|+++|+++..
T Consensus 142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred c--ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 0 1247999885544456667888999999998864
No 165
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.78 E-value=0.013 Score=50.34 Aligned_cols=81 Identities=27% Similarity=0.366 Sum_probs=56.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCC----CeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~----~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
.++.++|+|| +++|.+.++.....|+ .++.+.+..++++.+ .+++. ...+|. .+..+..+.+..+... -++
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~-~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEE-FGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHh-hCc
Confidence 3578899998 9999999999999999 577777888877654 56773 122333 2234555555555432 347
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++++.+|-
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999998873
No 166
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.77 E-value=0.038 Score=53.21 Aligned_cols=103 Identities=23% Similarity=0.319 Sum_probs=61.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh--hH-HHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YR-LSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~--~~-~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
++.++||+|+ |.+|...++.+...|++ +++++.+. ++ .+..++++...+ .|..+ ..+..+.+..+.+ ..+++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~-~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAH-VVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAE-RHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHH-hCCCC
Confidence 5789999998 99999999999999994 66665532 22 233345564322 23221 1222222222222 23479
Q ss_pred cEEEECCCC----------HHHHHHHHH-----------------hcccCCEEEEEcC
Q 017916 256 DVSFDCAGF----------NKTMSTALS-----------------ATRAGGKVCLVGM 286 (364)
Q Consensus 256 d~vid~~g~----------~~~~~~~~~-----------------~l~~~G~~v~~g~ 286 (364)
|++|+++|. .+.+...++ .++++|+++.++.
T Consensus 286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 999999883 233333333 4556789998863
No 167
>PRK08017 oxidoreductase; Provisional
Probab=96.77 E-value=0.015 Score=51.19 Aligned_cols=79 Identities=20% Similarity=0.312 Sum_probs=52.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
++|||+|+ |.+|.+.++.+...|+ .++++.++.++.+.++++++..+ .|+. ...++.+.+.......++.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLD-DPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecC-CHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 47999998 9999999999999999 57777788888777777775432 2221 1122333333332222457899888
Q ss_pred CCC
Q 017916 261 CAG 263 (364)
Q Consensus 261 ~~g 263 (364)
+.|
T Consensus 81 ~ag 83 (256)
T PRK08017 81 NAG 83 (256)
T ss_pred CCC
Confidence 876
No 168
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.75 E-value=0.02 Score=53.77 Aligned_cols=99 Identities=21% Similarity=0.269 Sum_probs=69.1
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
+..++++|++||..|+|. |..+..+++..|+ .|++++.+++..+.+++......+.+.. .++ +.+ .+.
T Consensus 161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l----~~~ 228 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL----NGQ 228 (383)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc----CCC
Confidence 667889999999999754 6778888988888 7899999999998887643211111111 121 111 356
Q ss_pred ccEEEEC-----CCC---HHHHHHHHHhcccCCEEEEEc
Q 017916 255 IDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 255 ~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 285 (364)
+|.|+.. +|. ...++.+.+.|+|+|.++...
T Consensus 229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9988743 342 356788899999999998764
No 169
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.74 E-value=0.0067 Score=54.01 Aligned_cols=99 Identities=21% Similarity=0.379 Sum_probs=60.5
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
++++++++|++||-.|+|- |..++.+|+..|+ .|.+++.|++..++++ +.|....+.+.. .|+ +++
T Consensus 55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~~~-- 124 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----RDL-- 124 (273)
T ss_dssp HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----GG---
T ss_pred HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----ccc--
Confidence 3678999999999999763 6678889998899 6899989998877765 355432111100 121 112
Q ss_pred HcCCCccEEEE-----CCCC---HHHHHHHHHhcccCCEEEEE
Q 017916 250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~ 284 (364)
..++|.|+. .+|. +..++.+.+.|+|+|+++.-
T Consensus 125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 237898865 4542 35678899999999998754
No 170
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.74 E-value=0.032 Score=46.83 Aligned_cols=101 Identities=19% Similarity=0.321 Sum_probs=60.4
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
..+++|++||..|+|.-+ .+..+++.. +...+++++.++.+ +..++. .+..+....+..+.++... ...++
T Consensus 28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence 567899999999986633 444555543 44479999988754 112332 2222222222222232222 24579
Q ss_pred cEEEE-CC----CC------------HHHHHHHHHhcccCCEEEEEc
Q 017916 256 DVSFD-CA----GF------------NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 256 d~vid-~~----g~------------~~~~~~~~~~l~~~G~~v~~g 285 (364)
|+|+. .. |. ...+..+.++|+++|+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 99995 21 21 356778899999999998753
No 171
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.73 E-value=0.055 Score=46.10 Aligned_cols=103 Identities=17% Similarity=0.207 Sum_probs=67.2
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHH
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEK 246 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i~~ 246 (364)
.++...++++++||-.|+|. |..+..+++..+ ...|++++.+++-.+.++ ..+... +..... +..+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~---d~~~~~-- 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG---DGKRGL-- 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC---CcccCC--
Confidence 34667788999999998765 777788888764 237999999887665544 345321 111111 111101
Q ss_pred HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
. ....+|.|+-+.........+++.|+++|+++..
T Consensus 138 -~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 138 -E--KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred -c--cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 0 1257999987666556667888999999999764
No 172
>PRK14967 putative methyltransferase; Provisional
Probab=96.70 E-value=0.13 Score=44.38 Aligned_cols=99 Identities=26% Similarity=0.325 Sum_probs=64.2
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
+....++++++||-.|+|. |..++.+++. ++..+++++.+++..+.+++ .+....+. . .++.+.+
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~~----- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARAV----- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhhc-----
Confidence 3445678899999999876 8888888875 66579999999887765543 34321111 1 2222211
Q ss_pred HcCCCccEEEECCC---C------------------------HHHHHHHHHhcccCCEEEEE
Q 017916 250 AMGTGIDVSFDCAG---F------------------------NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 250 ~~~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~G~~v~~ 284 (364)
....+|+|+.... . ...+..+.+.|+++|+++.+
T Consensus 98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1357999986421 0 12445678899999999875
No 173
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.017 Score=51.46 Aligned_cols=78 Identities=22% Similarity=0.270 Sum_probs=52.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.++||+|+ |.+|...++.+...|+ .|++++++.++.+.+...+...+ .|+. ..+++.+.+..+.+. .+++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~-~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVN-DGAALARLAEELEAE-HGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCC-CHHHHHHHHHHHHHh-cCCCCEEEE
Confidence 37899998 9999999999988999 57777777776665555554332 2332 223444444443322 357999999
Q ss_pred CCC
Q 017916 261 CAG 263 (364)
Q Consensus 261 ~~g 263 (364)
++|
T Consensus 79 ~ag 81 (274)
T PRK05693 79 NAG 81 (274)
T ss_pred CCC
Confidence 988
No 174
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.63 E-value=0.024 Score=50.56 Aligned_cols=105 Identities=17% Similarity=0.203 Sum_probs=68.6
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
+..+ .+|||.|+|. |-++-.+++....+.++.++-+++=.+++++. +....-..+..-+=..+...++.+....++|
T Consensus 74 h~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fD 151 (282)
T COG0421 74 HPNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFD 151 (282)
T ss_pred CCCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCC
Confidence 3344 5999998655 55677888888888999999999989988873 3221111111111111123344444455899
Q ss_pred EEE-ECCCC---------HHHHHHHHHhcccCCEEEEE
Q 017916 257 VSF-DCAGF---------NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 257 ~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~ 284 (364)
+|| |+.-. .+..+.+.++|+++|.++.-
T Consensus 152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred EEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 987 54332 57888999999999999876
No 175
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.61 E-value=0.063 Score=47.66 Aligned_cols=104 Identities=21% Similarity=0.280 Sum_probs=64.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EE--ecC-CCcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IV--KVS-TNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~--~~~-~~~~~~~~~i~~~~~~~ 251 (364)
.|..|+|+|| +++|.+.+.-.-..|++.+.++ +..++.+. +++++... ++ ..| ...++..+.+... ...
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~-~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA-IRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH-HHh
Confidence 4688999999 9999988888888899654444 55555444 44445433 22 122 2234444444332 233
Q ss_pred CCCccEEEECCCCH-------------------------HHHHHHHHhcccC--CEEEEEcC
Q 017916 252 GTGIDVSFDCAGFN-------------------------KTMSTALSATRAG--GKVCLVGM 286 (364)
Q Consensus 252 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~ 286 (364)
-+++|+.++.+|-. ...+.++..|++. |+++..+.
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisS 150 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISS 150 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEec
Confidence 56899999988732 1334566666543 99998874
No 176
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.60 E-value=0.049 Score=45.67 Aligned_cols=82 Identities=16% Similarity=0.222 Sum_probs=56.8
Q ss_pred CCCEEEEEc-C-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeE-EecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMG-A-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~G-a-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
....|||+| + |++|.+.+.-...-|+ .|+++.++-++...+. ++|.... +|. +.+++..+...+..+...++.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence 346789997 4 9999999888888999 7888888877766554 7775432 233 2334555444444443467899
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
+.++.+|-
T Consensus 84 ~L~NNAG~ 91 (289)
T KOG1209|consen 84 LLYNNAGQ 91 (289)
T ss_pred EEEcCCCC
Confidence 99997763
No 177
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.58 E-value=0.044 Score=48.56 Aligned_cols=101 Identities=21% Similarity=0.357 Sum_probs=71.2
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~~ 249 (364)
+..++++|++||=.|.|- |.+++..|+.+|+ .|++++-|.+..+.+++ .|.. .+-.. ..| .+.+
T Consensus 66 ~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~---l~d----~rd~-- 134 (283)
T COG2230 66 EKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVR---LQD----YRDF-- 134 (283)
T ss_pred HhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEE---ecc----cccc--
Confidence 779999999999999766 7788899999999 78999999987776654 5654 21110 011 1112
Q ss_pred HcCCCccEEEE-----CCCC---HHHHHHHHHhcccCCEEEEEcCCC
Q 017916 250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
.+.||-|+. .+|. ++.+..+.+.|+++|++.+.....
T Consensus 135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 234777753 4553 467788999999999999876433
No 178
>PRK06182 short chain dehydrogenase; Validated
Probab=96.55 E-value=0.03 Score=49.89 Aligned_cols=81 Identities=23% Similarity=0.275 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
++.+++|+|+ |.+|...++.+...|+ .|++++++.++.+.+...+...+ .|.. ..+++.+.++.+.+. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~-~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVT-DEASIKAAVDTIIAE-EGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCC-CHHHHHHHHHHHHHh-cCCCCEE
Confidence 3578999998 9999999999988999 56777777766654444444322 2322 223444444444332 3579999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|+++|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999873
No 179
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.033 Score=51.24 Aligned_cols=82 Identities=26% Similarity=0.347 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.+|||+|+ +++|.+.++.+...|++ |+.+++++++.+. +++.|... ++..|-. .++..+.+..+.+ ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence 4679999998 99999999999999994 6677777766543 23345432 2222211 2233333333322 235
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 180
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.48 E-value=0.055 Score=44.91 Aligned_cols=90 Identities=19% Similarity=0.281 Sum_probs=60.2
Q ss_pred EEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916 185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (364)
Q Consensus 185 VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g 263 (364)
|+|.|+ |.+|...++.+...|. .|.++.+++++.+. ..++. ++..+- .+. +.+++.. .++|.||+++|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence 789998 9999999999999997 67777788887766 33333 233222 222 2233322 37999999998
Q ss_pred C----HHHHHHHHHhcccCC--EEEEEc
Q 017916 264 F----NKTMSTALSATRAGG--KVCLVG 285 (364)
Q Consensus 264 ~----~~~~~~~~~~l~~~G--~~v~~g 285 (364)
. .+....+++.++..| +++.++
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s 97 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLS 97 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred hhcccccccccccccccccccccceeee
Confidence 4 344556666665543 677665
No 181
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.037 Score=48.75 Aligned_cols=81 Identities=25% Similarity=0.331 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.|.+|||+|+ |.+|.+.++.+...|+ .|+.+++++.+.+. ..+++.. .+..+-. .+++.+.+..+... .+++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAET-YGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4789999998 9999999999999999 56666666655443 3445442 2222221 22333333333222 247999
Q ss_pred EEECCCC
Q 017916 258 SFDCAGF 264 (364)
Q Consensus 258 vid~~g~ 264 (364)
+|.++|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998873
No 182
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.46 E-value=0.056 Score=46.72 Aligned_cols=104 Identities=26% Similarity=0.379 Sum_probs=72.4
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
+...++.+|++|+-.|.|+ |.+++-||++.|. ..|++.+...+..+.+ +.+|....+.+. ..|..+.+
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~Dv~~~~---- 159 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGDVREGI---- 159 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--eccccccc----
Confidence 3668899999999988765 7888999998876 4788888877665554 345554422211 12222211
Q ss_pred HHcCCCccEEE-ECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916 249 KAMGTGIDVSF-DCAGFNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 249 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
.+..+|.+| |--...+.++.+.+.|+++|.++.+..
T Consensus 160 --~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 160 --DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred --cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 134788875 665556888999999999999999854
No 183
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.38 E-value=0.048 Score=45.69 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
++++.+||-.|+|. |..++.+++......|++++.+++..+.++ +.+.+.+..... +.. ++.. ...
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~~~ 112 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--EEK 112 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--CCC
Confidence 45689999998754 566667776554448999999987766554 355543221111 211 1111 357
Q ss_pred ccEEEECCC--CHHHHHHHHHhcccCCEEEEE
Q 017916 255 IDVSFDCAG--FNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 255 ~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~ 284 (364)
+|+|+.... -.+.+..+.+.|+++|+++.+
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 999986432 146777899999999999977
No 184
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.38 E-value=0.089 Score=44.41 Aligned_cols=104 Identities=13% Similarity=0.295 Sum_probs=63.5
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
+....++++++||=.|+|. |..++.+++......+++++.+++..+.+++ ++...+.... .+..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~-- 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL-- 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC--
Confidence 3556778899998887644 5556666766544479999999887766543 5554322211 1222212111
Q ss_pred HcCCCccE-EEECCCC-HHHHHHHHHhcccCCEEEEEc
Q 017916 250 AMGTGIDV-SFDCAGF-NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 250 ~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g 285 (364)
...+|. .++.... .+.+..+.+.|+++|+++...
T Consensus 107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 122344 4443322 467888999999999998774
No 185
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.35 E-value=0.03 Score=46.53 Aligned_cols=90 Identities=21% Similarity=0.221 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
-.|.+|.|+|.|.+|+..++.++.+|+ .|++.+++..........+... .++.+ +. ...|+|+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~e----ll----~~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDE----LL----AQADIVS 96 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHH----HH----HH-SEEE
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhh----hc----chhhhhh
Confidence 368999999999999999999999999 7888888777665445555421 12222 22 2468888
Q ss_pred ECCCCHH-----HHHHHHHhcccCCEEEEEcC
Q 017916 260 DCAGFNK-----TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 260 d~~g~~~-----~~~~~~~~l~~~G~~v~~g~ 286 (364)
.+....+ .-...+..|+++..++.++.
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred hhhccccccceeeeeeeeeccccceEEEeccc
Confidence 7665211 11356788898888887753
No 186
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.049 Score=47.90 Aligned_cols=82 Identities=22% Similarity=0.299 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CC-CeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GA-DNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~-~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
..+.+|||+|+ |.+|..++..+...|+ .|+.+.++.++.+.+ ..+ +. ...+..+- ..+++.+.++...+. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE-A 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh-c
Confidence 45789999998 9999999999999999 577777777665433 222 21 12222222 223444444443322 3
Q ss_pred CCccEEEECCC
Q 017916 253 TGIDVSFDCAG 263 (364)
Q Consensus 253 ~~~d~vid~~g 263 (364)
+++|++|++.|
T Consensus 85 ~~~d~li~~ag 95 (258)
T PRK06949 85 GTIDILVNNSG 95 (258)
T ss_pred CCCCEEEECCC
Confidence 57999999988
No 187
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.12 Score=45.02 Aligned_cols=82 Identities=16% Similarity=0.139 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...+..+...|+ .++.+++++++.... ++ .+.. ..+..+-.+ +++.+.+..+... -+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-LG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 4689999998 9999999999988999 466666666544322 22 2322 122222221 2222222222221 25
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 188
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.29 E-value=0.042 Score=48.36 Aligned_cols=82 Identities=22% Similarity=0.222 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.+.++||+|+ |.+|.+.++.+...|+++++....+++..+.++..+.. .+..+- ..++..+.++.+... -+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~-~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEKE-FGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 4678999998 99999999999889995444333344444444433432 222221 223344444443332 2479999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 189
>PLN02823 spermine synthase
Probab=96.27 E-value=0.051 Score=49.88 Aligned_cols=98 Identities=18% Similarity=0.235 Sum_probs=62.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CCeEEecCCC-----cccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADNIVKVSTN-----LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~ 254 (364)
...+|||.|+|. |..+..+++..+.+.+.+++.+++-.+++++.- .... .++.. ..|-.+.+ ....+.
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~-~~~dprv~v~~~Da~~~L----~~~~~~ 176 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNRE-AFCDKRLELIINDARAEL----EKRDEK 176 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccc-cccCCceEEEEChhHHHH----hhCCCC
Confidence 457899998764 566677778777778999999999999888742 1100 00000 12222222 223568
Q ss_pred ccEEE-ECCC-----------CHHHHH-HHHHhcccCCEEEEE
Q 017916 255 IDVSF-DCAG-----------FNKTMS-TALSATRAGGKVCLV 284 (364)
Q Consensus 255 ~d~vi-d~~g-----------~~~~~~-~~~~~l~~~G~~v~~ 284 (364)
+|+|| |... +.+.++ .+.+.|+++|.++.-
T Consensus 177 yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 177 FDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred ccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 99987 4321 224565 788899999998754
No 190
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.049 Score=47.49 Aligned_cols=78 Identities=23% Similarity=0.341 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
++.+++|+|+ |.+|...++.+...|+ .|+.++++.++.+.+ +.++.. .+..+-.+. +.+...... .+++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~---~~v~~~~~~-~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVGDD---AAIRAALAA-AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCCCH---HHHHHHHHH-hCCCCEE
Confidence 5679999998 9999999999999999 577777777665443 444543 222222211 123333322 3479999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 998873
No 191
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.25 E-value=0.056 Score=50.23 Aligned_cols=96 Identities=17% Similarity=0.239 Sum_probs=64.1
Q ss_pred CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC---CCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
.+|||.|+|.+|+.+++.+.+.+...|.+.+++.++.+.+.... .. .+.++-. +.. .+.++. .+.|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~~--d~~-al~~li----~~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDAA--DVD-ALVALI----KDFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccce-eEEeccc--ChH-HHHHHH----hcCCEEE
Confidence 47899999999999999998888557888889988888776653 22 2222221 222 232332 3569999
Q ss_pred ECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916 260 DCAGFNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+|....-....+-.|++.+=.+++...
T Consensus 74 n~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 74 NAAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred EeCCchhhHHHHHHHHHhCCCEEEccc
Confidence 999855554444456666656666653
No 192
>PRK04457 spermidine synthase; Provisional
Probab=96.24 E-value=0.12 Score=45.80 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC----CeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA----DNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~----~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
.++.+||+.|.|. |..+..+++......+.+++.+++-.+.+++. +. ..+... ..|..+.++. ....
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~----~~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAV----HRHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHh----CCCC
Confidence 4567899999865 77888888887655799999999988888763 32 111111 1333333332 2457
Q ss_pred ccEEE-ECCC---------CHHHHHHHHHhcccCCEEEE
Q 017916 255 IDVSF-DCAG---------FNKTMSTALSATRAGGKVCL 283 (364)
Q Consensus 255 ~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~ 283 (364)
+|+|+ |+.. ..+.++.+.++|+++|.++.
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 99986 4432 14788899999999999986
No 193
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.23 E-value=0.088 Score=51.52 Aligned_cols=45 Identities=20% Similarity=0.224 Sum_probs=36.2
Q ss_pred HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH
Q 017916 175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS 220 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~ 220 (364)
...+.+.|.+|||+|+ |.+|..+++.+...|+ .|+++.++.++..
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~ 118 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAE 118 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHH
Confidence 3466788999999998 9999999999988999 4666667766654
No 194
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.23 E-value=0.022 Score=50.50 Aligned_cols=96 Identities=19% Similarity=0.288 Sum_probs=69.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~ 261 (364)
..+|.|.|+|.+|.-++.+|.-+|+ .|...+.+..|...++.+....+..+.++..++.+.+ .+.|++|.+
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIga 238 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIGA 238 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEEE
Confidence 4567777999999999999999999 5788889999999888755444333323333333332 468999886
Q ss_pred CCC------HHHHHHHHHhcccCCEEEEEcC
Q 017916 262 AGF------NKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 262 ~g~------~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+=. .-..+++++.|+||+.++++..
T Consensus 239 VLIpgakaPkLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 239 VLIPGAKAPKLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred EEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence 421 2355688999999999998863
No 195
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.059 Score=47.73 Aligned_cols=81 Identities=17% Similarity=0.266 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +.+ +.. .++..+-.+ +++.+.+....+. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-FG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 5789999998 9999999999988999 567777776654332 222 322 222222222 2222233333222 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++|+++|
T Consensus 87 ~id~vi~~Ag 96 (263)
T PRK07814 87 RLDIVVNNVG 96 (263)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 196
>PRK00536 speE spermidine synthase; Provisional
Probab=96.21 E-value=0.021 Score=50.29 Aligned_cols=99 Identities=10% Similarity=-0.100 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
....+|||.|+|. |.++-.++|.-. .|..++-+++-.+++++ |..-.. .+++.+-.+...+ .+...+.+|+|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~---~~~~~~~fDVI 143 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQL---LDLDIKKYDLI 143 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehh---hhccCCcCCEE
Confidence 4568999998766 567778888753 78888888888888887 331110 1222222222112 12123679997
Q ss_pred E-ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916 259 F-DCAGFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 259 i-d~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
| |+.-+++....+.++|+++|.++.-+
T Consensus 144 IvDs~~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 144 ICLQEPDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred EEcCCCChHHHHHHHHhcCCCcEEEECC
Confidence 6 76666788889999999999998764
No 197
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.11 Score=45.83 Aligned_cols=82 Identities=23% Similarity=0.277 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
.+.++||+|+ +.+|.+.+..+...|+ .|+.++++.++.+ +.++++.. ..+..|- ..+++.+.++..... -+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4679999998 9999999999999999 5677777765443 44455532 1222221 223344444443332 24699
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.++|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998873
No 198
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.15 Score=47.09 Aligned_cols=82 Identities=18% Similarity=0.246 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.+|||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+ +..|... .+..|- +.+++.+.+..+.+. -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-LG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-CC
Confidence 4678999998 9999999999988999 566677776654432 2345432 122221 223333333333322 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|+++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 199
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.20 E-value=0.1 Score=45.28 Aligned_cols=107 Identities=23% Similarity=0.395 Sum_probs=74.3
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
....+++|++||=.++|. |-.|..+++..|-..|+++|-++..++.+++- |... +.+... + ...+ ..
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~--d----Ae~L-Pf 115 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG--D----AENL-PF 115 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe--c----hhhC-CC
Confidence 345566999999987654 88999999999877899999999988887652 2222 111111 1 0001 11
Q ss_pred cCCCccEEEECCCC------HHHHHHHHHhcccCCEEEEEcCCCCC
Q 017916 251 MGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGHHE 290 (364)
Q Consensus 251 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~ 290 (364)
....+|++..+.|- +..+.++.+.|+|+|+++.+.++...
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~ 161 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD 161 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCC
Confidence 14578988776652 46889999999999999998865544
No 200
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.18 E-value=0.029 Score=50.37 Aligned_cols=137 Identities=20% Similarity=0.346 Sum_probs=70.6
Q ss_pred CcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 136 g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
.+|.+|-.-+....+.+.+++.+-...=- +-......++.. .++|++||=.|.|. |..++.- ..+|++.|++++.+
T Consensus 118 P~w~~~~~~~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA-~klGA~~v~a~DiD 193 (295)
T PF06325_consen 118 PSWEEYPEPPDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAA-AKLGAKKVVAIDID 193 (295)
T ss_dssp ETT----SSTTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHH-HHTTBSEEEEEESS
T ss_pred CCCcccCCCCCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHH-HHcCCCeEEEecCC
Confidence 44555522244556666666655443200 111122233333 57889999988633 3333333 34599999999998
Q ss_pred hhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCH---HHHHHHHHhcccCCEEEEEcCC
Q 017916 216 DYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG 287 (364)
Q Consensus 216 ~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 287 (364)
+...+.+++ -|...-+.... ..+. ...++|+|+-..-.. .....+.++|+++|.++..|..
T Consensus 194 p~Av~~a~~N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl 261 (295)
T PF06325_consen 194 PLAVEAARENAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGIL 261 (295)
T ss_dssp CHHHHHHHHHHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEcccc
Confidence 866555443 23332221111 1111 136799999766632 2334456678999999998743
No 201
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.052 Score=48.32 Aligned_cols=81 Identities=28% Similarity=0.279 Sum_probs=51.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
+.++||+|+ |.+|...++.+...|++ |+.+++++++.+. .+.++....+..|- ..+++.+.+..+... -+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 578999998 99999999988888994 6666677666543 34454222222222 223444444444332 2579999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|+++|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999873
No 202
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.16 E-value=0.068 Score=47.36 Aligned_cols=82 Identities=22% Similarity=0.390 Sum_probs=53.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh----HHHHHHHcC-CC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY----RLSVAKELG-AD-NIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~----~~~~~~~lg-~~-~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
-.|+.|||+|+ +++|.+.++-...+|+ +++..+.+.+ ..+..++.| +. ...|. +..++.....++..+..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~- 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEV- 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhc-
Confidence 36899999987 8999888887778888 5666665543 233444444 21 22233 33455555555555444
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+.+|++++.+|.
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 489999998873
No 203
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.15 E-value=0.16 Score=43.36 Aligned_cols=104 Identities=22% Similarity=0.399 Sum_probs=71.7
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
++.+...+||-.|. .+|..++.+|..+. -.++++++.++++.+.+++ .|....+..-.. .+..+.+++ ..
T Consensus 55 ~~~~~~k~iLEiGT-~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~ 129 (219)
T COG4122 55 ARLSGPKRILEIGT-AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL 129 (219)
T ss_pred HHhcCCceEEEeec-ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence 44457788888885 34788889998876 3379999999998877664 566553221111 344444444 23
Q ss_pred CCCccEEE-ECCC--CHHHHHHHHHhcccCCEEEEEc
Q 017916 252 GTGIDVSF-DCAG--FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 252 ~~~~d~vi-d~~g--~~~~~~~~~~~l~~~G~~v~~g 285 (364)
.+.||+|| |+.= -++.++.+++.|++||.++.=+
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 57899997 5432 2678899999999999988755
No 204
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.16 Score=44.31 Aligned_cols=104 Identities=22% Similarity=0.235 Sum_probs=59.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHH-HH---HHcCCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLS-VA---KELGAD-NIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~-~~---~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.+.++||+|+ |.+|...+..+...|++ |+++.++. ++.+ +. +..+.. ..+..+- ..+++.+.++.+... .
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE-F 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence 4678999998 99999999998889995 55555543 2222 22 222322 1222221 223333333333322 2
Q ss_pred CCccEEEECCCCH-------------------HHHHHHHHhcccCCEEEEEcC
Q 017916 253 TGIDVSFDCAGFN-------------------KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 253 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+++|++|.++|.. ...+.+.+.+...|+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 4689999877632 234455555566688887753
No 205
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.13 E-value=0.016 Score=55.76 Aligned_cols=91 Identities=11% Similarity=0.145 Sum_probs=57.4
Q ss_pred HcCCCCCCEEE----EEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHH
Q 017916 176 RANIGPETNVL----IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 176 ~~~~~~g~~VL----I~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~ 249 (364)
..++++|+++| |+|+ |++|.+++|+++..|++ |+.+.....+....+..+... +++ .....+.+.+..+
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~-- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYD-VVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKAL-- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCe-eeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHH--
Confidence 36678999998 8876 99999999999999995 555544444333333334332 333 2223333333322
Q ss_pred HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
.+.....++.|.++|+++.++.
T Consensus 103 ---------------~~~~~~~l~~l~~~griv~i~s 124 (450)
T PRK08261 103 ---------------YEFFHPVLRSLAPCGRVVVLGR 124 (450)
T ss_pred ---------------HHHHHHHHHhccCCCEEEEEcc
Confidence 1345566777888888888764
No 206
>PRK00811 spermidine synthase; Provisional
Probab=96.11 E-value=0.034 Score=49.91 Aligned_cols=98 Identities=19% Similarity=0.207 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-C-----C--C-eEEecCCCcccHHHHHHHHHHH
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-G-----A--D-NIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g-----~--~-~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
.+.++||+.|+|. |..+..+++..+...|.+++.+++-.+.+++. . . + .+..+ ..|..+.+ ..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~---~~Da~~~l----~~ 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV---IGDGIKFV----AE 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE---ECchHHHH----hh
Confidence 4567999998765 66777778777777899999999888887763 1 1 1 11111 12322222 22
Q ss_pred cCCCccEEEECCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916 251 MGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 251 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g 285 (364)
..+.+|+||.-.. +.+.++.+.+.|+++|.++...
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 3568999885321 1345678899999999998753
No 207
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.15 Score=44.14 Aligned_cols=82 Identities=27% Similarity=0.266 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCC---CeEEecC-CCcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA---DNIVKVS-TNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~---~~~~~~~-~~~~~~~~~i~~~~~~~~~~ 254 (364)
.+.++||+|+ |.+|..+++.+...|++ |+++++++++.. +.+.+.. ...+..+ ....++.+.++.+.+. ..+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 4678999998 99999999988888995 677777665543 3344431 1122222 1223334444443332 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998763
No 208
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.056 Score=46.58 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=48.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHcCCCccEEEE
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.+++|+|+ |.+|...+..+...|+ .|++++++.++.+.+++++-......+-.+ +++.+..+.+ ...++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence 46899998 9999999888888899 577777776665555544322222222211 2222222222 1347999998
Q ss_pred CCCC
Q 017916 261 CAGF 264 (364)
Q Consensus 261 ~~g~ 264 (364)
++|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8763
No 209
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.084 Score=47.67 Aligned_cols=82 Identities=24% Similarity=0.311 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ + ..+.. ..+..+-. .+++.+.++.+... -+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 3578999998 9999999999888899 577777776654433 2 22322 12222222 22333333333222 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|+++|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 210
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.03 E-value=0.089 Score=46.53 Aligned_cols=81 Identities=22% Similarity=0.263 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
++.++||+|+ +.+|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+- ..++..+.++...+. -+++|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence 4679999998 9999999999999999 5677777776655443 34421 1222221 223334444444332 34799
Q ss_pred EEEECCC
Q 017916 257 VSFDCAG 263 (364)
Q Consensus 257 ~vid~~g 263 (364)
++|+++|
T Consensus 83 ~li~~ag 89 (263)
T PRK06200 83 CFVGNAG 89 (263)
T ss_pred EEEECCC
Confidence 9999887
No 211
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.01 E-value=0.029 Score=46.18 Aligned_cols=100 Identities=19% Similarity=0.276 Sum_probs=64.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe-cCCC--------------cccHHHHHHH
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK-VSTN--------------LQDIAEEVEK 246 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~-~~~~--------------~~~~~~~i~~ 246 (364)
.-+|+|+|+|.+|+.|+.+++.+|+ .+++.+...++.+..+.++...+.. +... .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4789999999999999999999999 6788888888888888877654332 1110 1122222222
Q ss_pred HHHHcCCCccEEEECC---C--CHH-HHHHHHHhcccCCEEEEEcC
Q 017916 247 IQKAMGTGIDVSFDCA---G--FNK-TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~---g--~~~-~~~~~~~~l~~~G~~v~~g~ 286 (364)
.. ..+|++|.+. + .+. ...+.++.|+++..++++..
T Consensus 99 ~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 99 FI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 22 3578888532 1 122 22467888999999998863
No 212
>PRK06196 oxidoreductase; Provisional
Probab=95.98 E-value=0.067 Score=48.85 Aligned_cols=81 Identities=17% Similarity=0.278 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.+.+|||+|+ |.+|.+++..+...|+ .|+.+.++.++.+. ..++.....+..|-. .+++.+.+..+... .+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~-~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDS-GRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhc-CCCCCE
Confidence 4679999998 9999999998888999 46666676655433 233321122222221 22333333333221 357999
Q ss_pred EEECCC
Q 017916 258 SFDCAG 263 (364)
Q Consensus 258 vid~~g 263 (364)
+|+++|
T Consensus 103 li~nAg 108 (315)
T PRK06196 103 LINNAG 108 (315)
T ss_pred EEECCC
Confidence 999887
No 213
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.078 Score=45.88 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH-HHHHH---cCCCeE-EecCCCcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKE---LGADNI-VKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~~~~---lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
++.++||+|+ |.+|..+++.+...|++ |+.++++.++. +.+++ .+...+ .|.. +.+++.+.++..... -++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRIGGIDLV-DPQAARRAVDEVNRQ-FGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcCceEEEeecC-CHHHHHHHHHHHHHH-hCC
Confidence 3689999998 99999999988888994 67776655442 22222 233221 1221 123333333333222 247
Q ss_pred ccEEEECCC
Q 017916 255 IDVSFDCAG 263 (364)
Q Consensus 255 ~d~vid~~g 263 (364)
+|++|.+.|
T Consensus 83 ~d~vi~~ag 91 (239)
T PRK12828 83 LDALVNIAG 91 (239)
T ss_pred cCEEEECCc
Confidence 999999876
No 214
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.082 Score=46.41 Aligned_cols=80 Identities=28% Similarity=0.346 Sum_probs=49.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-H---cCCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~---lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
|.++||+|+ +.+|.+.++.+...|+ .|++++++.++.+.+. . .+.. ..+..|- ..+++.+.+.++.+.. ++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence 468999998 9999999999999999 6777777665543322 2 2221 2232222 2233333343333322 46
Q ss_pred ccEEEECCC
Q 017916 255 IDVSFDCAG 263 (364)
Q Consensus 255 ~d~vid~~g 263 (364)
+|++|++.|
T Consensus 79 id~lI~~ag 87 (252)
T PRK07677 79 IDALINNAA 87 (252)
T ss_pred ccEEEECCC
Confidence 999999887
No 215
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.071 Score=48.22 Aligned_cols=81 Identities=31% Similarity=0.451 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC-eE----EecCCCcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NI----VKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~-~~----~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
+|.++||+|+ |++|.++++.+...|+ .|+.+.++.++.+. .++++.. .+ .|.. +.++..+.+.++... .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~-~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVT-DLAAMQAAAEEAVER-FG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCC-CHHHHHHHHHHHHHH-cC
Confidence 5789999998 9999999999999999 56777777666543 4455421 11 2221 223333444443332 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|+++|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 216
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.94 E-value=0.094 Score=46.34 Aligned_cols=81 Identities=17% Similarity=0.251 Sum_probs=48.8
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHCCCCEEEEEecChhHH----HHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Gag---~~G~~ai~la~~~g~~~vv~~~~~~~~~----~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.|.++||+|++ ++|.+.++.+...|++ |+.+.++.+.. ++.++++....+..|- ..++..+.+....+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence 46899999873 8999999998889995 55555554322 2233444323333332 2233444444433322
Q ss_pred CCccEEEECCC
Q 017916 253 TGIDVSFDCAG 263 (364)
Q Consensus 253 ~~~d~vid~~g 263 (364)
+++|++|+++|
T Consensus 87 g~ld~lv~nAg 97 (258)
T PRK07533 87 GRLDFLLHSIA 97 (258)
T ss_pred CCCCEEEEcCc
Confidence 47999999886
No 217
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.93 E-value=0.16 Score=43.11 Aligned_cols=35 Identities=43% Similarity=0.545 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
.+.+|+|.|+|++|..+++.+...|...+..++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 35789999999999999999999999888888765
No 218
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.93 E-value=0.12 Score=45.20 Aligned_cols=81 Identities=17% Similarity=0.272 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|..+++.+...|+ .|+.++++.++.+.. +..+.. ..+..+-. .+++.+.++.+... .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4789999998 9999999999998999 577777776554322 223432 12223222 22333333333322 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|.+|.++|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 219
>PRK01581 speE spermidine synthase; Validated
Probab=95.91 E-value=0.22 Score=45.90 Aligned_cols=98 Identities=16% Similarity=0.125 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-----------CeEEecCCCcccHHHHHHHHH
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-----------DNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-----------~~~~~~~~~~~~~~~~i~~~~ 248 (364)
....+|||.|+|. |.++..+++..+...|.+++.+++-.+.++.+.. ..+... -.|..+.+
T Consensus 149 ~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL---- 220 (374)
T PRK01581 149 IDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFL---- 220 (374)
T ss_pred CCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHH----
Confidence 4457999998754 6677777777666789999999998998886310 011000 12323323
Q ss_pred HHcCCCccEEEECCCC-----------HHHHHHHHHhcccCCEEEEEc
Q 017916 249 KAMGTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g 285 (364)
......+|+||--... .+.+..+.+.|+|+|.++.-.
T Consensus 221 ~~~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 221 SSPSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred HhcCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 2235679998743221 346778899999999988764
No 220
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.1 Score=46.04 Aligned_cols=84 Identities=27% Similarity=0.345 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcC-C-HHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-H----cCCCeE--EecCCCc-ccHHHHHHHHH
Q 017916 179 IGPETNVLIMGA-G-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E----LGADNI--VKVSTNL-QDIAEEVEKIQ 248 (364)
Q Consensus 179 ~~~g~~VLI~Ga-g-~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~----lg~~~~--~~~~~~~-~~~~~~i~~~~ 248 (364)
+.++.++||+|+ | ++|.++++.+...|++ |+++++++++.+... + ++...+ +..+-.+ ++..+.++...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 345789999987 6 7999999999999995 666666665543322 1 343222 2222211 22333333332
Q ss_pred HHcCCCccEEEECCCC
Q 017916 249 KAMGTGIDVSFDCAGF 264 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~ 264 (364)
.. .+++|++|+++|.
T Consensus 93 ~~-~g~id~li~~ag~ 107 (262)
T PRK07831 93 ER-LGRLDVLVNNAGL 107 (262)
T ss_pred HH-cCCCCEEEECCCC
Confidence 22 2479999999984
No 221
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.90 E-value=0.083 Score=46.71 Aligned_cols=81 Identities=26% Similarity=0.235 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
++.+++|+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+.+ .+.. ..+..+- ...+..+.++++.+. -+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence 4689999998 9999999999988999 56777777666554443 3321 1121111 112333334443332 24789
Q ss_pred EEEECCC
Q 017916 257 VSFDCAG 263 (364)
Q Consensus 257 ~vid~~g 263 (364)
++|+++|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999886
No 222
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.11 Score=45.69 Aligned_cols=82 Identities=23% Similarity=0.241 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe--EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~-~~~~~~~i~~~~~~~~~~~d 256 (364)
.+.++||+|+ |.+|...++.+...|+ .|+.+.++.+..+...++.... .+..+-. .+++.+.+..+... -.++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4679999998 9999999999888999 5677777766555554443221 2222221 22333333333322 24799
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 223
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=95.88 E-value=0.33 Score=43.11 Aligned_cols=102 Identities=23% Similarity=0.247 Sum_probs=63.8
Q ss_pred HcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 176 RANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.++ .+|...+..... |.. .+..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~----~~~~- 136 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGR----VFGA- 136 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHH----Hhhh-
Confidence 35678999998887654 455556666553 237999999998876654 456654322222 211 1111
Q ss_pred cCCCccEEE-E--CCCC-------------------------HHHHHHHHHhcccCCEEEEEcC
Q 017916 251 MGTGIDVSF-D--CAGF-------------------------NKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 251 ~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
....+|.|+ | |+|. .+.+..+++.|+++|+++....
T Consensus 137 ~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYstc 200 (264)
T TIGR00446 137 AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYSTC 200 (264)
T ss_pred hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 123599987 4 4543 1366778889999999986643
No 224
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.88 E-value=0.098 Score=46.63 Aligned_cols=82 Identities=21% Similarity=0.275 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHH----HHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~----~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
++.++||+|+ + ++|.+.++.+...|++ |+.+.++++.. ++.+++|....+..|- ..++..+.+++..+. -
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence 4678999998 4 8999999999999995 55555544222 2223445332222222 223344444443332 2
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+.+|++|+++|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999998873
No 225
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.85 E-value=0.14 Score=44.81 Aligned_cols=82 Identities=21% Similarity=0.229 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--HHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 255 (364)
.+.++||+|+ |.+|.+.+..+...|+ .|+.++++.. ..+.+++++.. ..+..+- ..+++.+.++...+. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence 4789999998 9999999999988999 5666655442 12333444432 2222222 123333333333322 2479
Q ss_pred cEEEECCCC
Q 017916 256 DVSFDCAGF 264 (364)
Q Consensus 256 d~vid~~g~ 264 (364)
|++|+++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 226
>PRK08317 hypothetical protein; Provisional
Probab=95.83 E-value=0.16 Score=43.99 Aligned_cols=104 Identities=24% Similarity=0.294 Sum_probs=68.0
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHc--CCCeEEecCCCcccHHHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL--GADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~l--g~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
++...+.++++||..|+|. |..+..+++..+ ...+++++.++...+.+++. .....+.+.. .+..+ . ..
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~--~d~~~----~-~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVR--GDADG----L-PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEe--ccccc----C-CC
Confidence 3567888999999999865 788889998874 34799999998888877664 1111111100 01000 0 00
Q ss_pred cCCCccEEEECC------CCHHHHHHHHHhcccCCEEEEEc
Q 017916 251 MGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 251 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
....+|+|+... .....+..+.++|+++|.++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 135689887532 22457788999999999998765
No 227
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.099 Score=45.64 Aligned_cols=82 Identities=27% Similarity=0.330 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d 256 (364)
++.++||+|+ |.+|...++.+...|+ .++.++++.++.+ ..++++... .+..+-. ..+..+....+.+. .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4679999998 9999999999999999 5677766665543 334555432 2222211 12222222323222 35799
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998873
No 228
>PRK06128 oxidoreductase; Provisional
Probab=95.80 E-value=0.3 Score=44.24 Aligned_cols=103 Identities=20% Similarity=0.218 Sum_probs=59.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--H----HHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--R----LSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~----~~~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
.+.++||+|+ +.+|.+.+..+...|++ |+.+..+.+ + .+.++..+... .+..+- ..+++.+.+.++.+.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE- 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence 4679999998 99999999999889995 444433221 1 12233344322 222221 123333334333332
Q ss_pred CCCccEEEECCCCH--------------------------HHHHHHHHhcccCCEEEEEc
Q 017916 252 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g 285 (364)
-+++|++|.++|.. ...+.++..+.++|+++.++
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~s 191 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTG 191 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEEC
Confidence 24799999988731 12334455566778988876
No 229
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.77 E-value=0.21 Score=42.67 Aligned_cols=101 Identities=20% Similarity=0.155 Sum_probs=63.2
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHH
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
.++..+++++++||-.|+|. |..+..+++..+ .+++++.+++..+.++ +++...+..... +..+. +.
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~~ 140 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLVR--RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKG---WP 140 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHhC--EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccC---CC
Confidence 34567888999999998754 555556666543 6899998877665554 345433211111 11110 10
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
..+.+|+|+...........+.+.|+++|+++..
T Consensus 141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 1257999886555456667889999999998865
No 230
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.76 E-value=0.24 Score=42.90 Aligned_cols=92 Identities=24% Similarity=0.260 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCC--EEEEEecC----hhH--------HHHHHHcCCCeEEecCCCcccHHHHHH
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAP--RIVIVDVD----DYR--------LSVAKELGADNIVKVSTNLQDIAEEVE 245 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~--~vv~~~~~----~~~--------~~~~~~lg~~~~~~~~~~~~~~~~~i~ 245 (364)
-.+.+|+|.|+|..|..++..+...|.+ .++.++++ .+| .++++.++... ...++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~------~~~~l~~~l- 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK------TGGTLKEAL- 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc------ccCCHHHHH-
Confidence 4568999999999999999999899998 89999887 333 33445443211 001222222
Q ss_pred HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
.++|++|++++.+-.-...++.|.+...+..+.
T Consensus 96 -------~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 -------KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -------hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 248999999873322236677777776655544
No 231
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.12 Score=45.41 Aligned_cols=83 Identities=20% Similarity=0.278 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH----HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~----~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
++.+++|+|+ |.+|...++.+...|++.|+.++++.++.. .++..+... .+..+-. .+++.+.+....... +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-G 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 5678999998 999999999999999965777777655433 223334321 1222222 223333333332222 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 232
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.31 Score=43.30 Aligned_cols=78 Identities=28% Similarity=0.402 Sum_probs=46.9
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-H---HHcCCCe----EEecCCCcccHHHHHHHHHHHcCCC
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-A---KELGADN----IVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~---~~lg~~~----~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
+++|+|+ |++|..+++.+...|++ |+.+.+++++.+. . +..+... ..|..+ .++..+...++... .++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~-~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAA-HGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHh-cCC
Confidence 6899998 99999999999889995 6666666654332 2 2233321 123221 12233323333222 357
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|+++|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 233
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.098 Score=46.14 Aligned_cols=83 Identities=19% Similarity=0.230 Sum_probs=51.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCC--eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~ 254 (364)
-++.++||+|+ |.+|..++..+...|++ |+.+.++.+..+.+. .+.-. ..+..+-. .+++.+.+..+.+. -.+
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence 46789999998 99999999999999994 777777665544333 23211 12222221 22233333333322 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 87 ~d~vi~~ag~ 96 (264)
T PRK12829 87 LDVLVNNAGI 96 (264)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 234
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.74 E-value=0.057 Score=43.97 Aligned_cols=80 Identities=23% Similarity=0.312 Sum_probs=50.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC--hhHHH-HHHH---cCCC-eEEecC-CCcccHHHHHHHHHHHcCCC
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLS-VAKE---LGAD-NIVKVS-TNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~--~~~~~-~~~~---lg~~-~~~~~~-~~~~~~~~~i~~~~~~~~~~ 254 (364)
++||+|+ +++|.+.++.+...|..+++.+.++ .++.. +..+ .+.. ..+..| ...+++.+.+..+.. ....
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 80 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIK-RFGP 80 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHH-HHSS
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence 6899998 9999999888888888788888877 33333 3233 3421 122222 222444444444442 2457
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998874
No 235
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.12 Score=44.70 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecC-CCcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVS-TNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~ 253 (364)
.|.++||+|+ +++|.+.+..+...|+ .|+.+.++.++.+. +++.+... .+..+ ...++..+.+.++.+..+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 8999999998888999 46666666665432 22334332 22222 2223344444444443344
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
.+|++|+++|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 236
>PLN02366 spermidine synthase
Probab=95.73 E-value=0.094 Score=47.56 Aligned_cols=100 Identities=24% Similarity=0.267 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC------C-eEEecCCCcccHHHHHHHHHHH
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA------D-NIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~------~-~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
....++|||.|+|. |.++..+++.-+...+.+++.+++-.+++++. .. + .+-.. ..|..+.+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi---~~Da~~~l~~~--- 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH---IGDGVEFLKNA--- 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE---EChHHHHHhhc---
Confidence 35578999998765 55677888877777889999888877877763 21 0 11100 02222222211
Q ss_pred cCCCccEEEECCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916 251 MGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 251 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g 285 (364)
.++.+|+||--.. +.+.++.+.++|+++|.++.-.
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 1457999874322 1356788999999999997643
No 237
>PRK09186 flagellin modification protein A; Provisional
Probab=95.72 E-value=0.25 Score=43.29 Aligned_cols=81 Identities=23% Similarity=0.363 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc----CCCe--EEecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL----GADN--IVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l----g~~~--~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
++.+|||+|+ |.+|...+..+...|+ .++.+.++.++.+ ..+++ +... .+..+- ..+++.+.+......
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~- 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK- 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-
Confidence 4679999998 9999999999999999 4666666665543 22333 2211 112221 123333444443332
Q ss_pred CCCccEEEECCC
Q 017916 252 GTGIDVSFDCAG 263 (364)
Q Consensus 252 ~~~~d~vid~~g 263 (364)
-+++|++|.+++
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 246999999885
No 238
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.71 E-value=0.069 Score=51.98 Aligned_cols=73 Identities=27% Similarity=0.442 Sum_probs=51.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
+.+|++|+|+|.|..|++++++++..|+ .|++.+..+.+.+.++++|+... . . ....+.+ ..+|+|
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~--~--~~~~~~l--------~~~D~V 74 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-S--T--SDAVQQI--------ADYALV 74 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-c--C--cchHhHh--------hcCCEE
Confidence 4678999999999999999999999999 57778876666655677776432 1 1 1111111 357999
Q ss_pred EECCCCH
Q 017916 259 FDCAGFN 265 (364)
Q Consensus 259 id~~g~~ 265 (364)
|.+.|.+
T Consensus 75 V~SpGi~ 81 (488)
T PRK03369 75 VTSPGFR 81 (488)
T ss_pred EECCCCC
Confidence 9988864
No 239
>PRK06484 short chain dehydrogenase; Validated
Probab=95.70 E-value=0.29 Score=48.03 Aligned_cols=104 Identities=23% Similarity=0.280 Sum_probs=65.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d 256 (364)
.|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++++... .+..|-. .++..+.+....+. -+.+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 5788999998 9999999999989999 577777776665544 3455332 1222222 23333334333332 24799
Q ss_pred EEEECCCCH-----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916 257 VSFDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 257 ~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~ 286 (364)
++|.++|.. + ..+.++..++.+|+++.++.
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS 401 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGS 401 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECc
Confidence 999988731 0 13344556666789988863
No 240
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.70 E-value=0.12 Score=41.61 Aligned_cols=101 Identities=24% Similarity=0.285 Sum_probs=60.9
Q ss_pred HHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHH
Q 017916 174 CRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 174 l~~~~~-~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~ 250 (364)
+++..+ ..+.+++|.|+|.+|...++.+...|...+.+++++.++.+ +.++++... ...+ .+..+ .
T Consensus 10 ~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~----~--- 78 (155)
T cd01065 10 LEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLEE----L--- 78 (155)
T ss_pred HHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchhh----c---
Confidence 344333 45789999999999999998888887546788877776654 455555421 0111 11111 1
Q ss_pred cCCCccEEEECCCCHHH----HHHHHHhcccCCEEEEEcC
Q 017916 251 MGTGIDVSFDCAGFNKT----MSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 251 ~~~~~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g~ 286 (364)
-.++|++|.|+..... .......++++..++.++.
T Consensus 79 -~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 79 -LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred -cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 2578999999885332 1112234566666666653
No 241
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.13 Score=45.23 Aligned_cols=82 Identities=24% Similarity=0.310 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ +++|.+.++.+...|+ .|+.+.++.++.+.+ .++ +.. ..+..+- ..+++.+.++.+.+.. +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-G 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 4789999998 9999999999999999 566666666554332 222 322 1222221 2233334444433322 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 242
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.70 E-value=0.13 Score=45.54 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.|.++||+|+ + ++|.+.++.+...|++ |+.+.++++..+.+ ++++....+..|- ..++..+.++...+. -
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK-W 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4678999998 4 7999998888888995 55555553222222 2334332222222 223444444443332 2
Q ss_pred CCccEEEECCC
Q 017916 253 TGIDVSFDCAG 263 (364)
Q Consensus 253 ~~~d~vid~~g 263 (364)
+++|++++++|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 47999999876
No 243
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.69 E-value=0.13 Score=45.93 Aligned_cols=98 Identities=22% Similarity=0.331 Sum_probs=58.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
+++|.+||=.|.|+ |..+|. |..+|++.+++++.++...+.+++ -+...... ...-... ....++.
T Consensus 160 ~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~--~~~~~~~------~~~~~~~ 229 (300)
T COG2264 160 LKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQ--AKGFLLL------EVPENGP 229 (300)
T ss_pred hcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhh--cccccch------hhcccCc
Confidence 46899999998743 444433 345789899999988865554443 33331000 0000000 0111468
Q ss_pred ccEEEECCCCH---HHHHHHHHhcccCCEEEEEcC
Q 017916 255 IDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 255 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+|+|+-.+=.. .......++++|+|++++.|.
T Consensus 230 ~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGI 264 (300)
T COG2264 230 FDVIVANILAEVLVELAPDIKRLLKPGGRLILSGI 264 (300)
T ss_pred ccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEee
Confidence 99998755321 344567789999999999873
No 244
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.15 Score=45.55 Aligned_cols=82 Identities=22% Similarity=0.186 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC--eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD--NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
.+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+...... ..+..+- ..+++.+.++...+. -+++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence 3578999998 9999999999888999 577777777766554443211 1222221 122333333333222 24699
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.++|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999884
No 245
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.13 Score=45.52 Aligned_cols=82 Identities=23% Similarity=0.309 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCeE--EecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADNI--VKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~~--~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
.+.++||+|+ +.+|.+.++.+...|++ |+.+.+++++.+.. +++ +...+ +..+- ..++..+.+..+.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR- 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 4679999998 99999999999999994 66777776654432 222 11121 21121 122333333333322
Q ss_pred CCCccEEEECCCC
Q 017916 252 GTGIDVSFDCAGF 264 (364)
Q Consensus 252 ~~~~d~vid~~g~ 264 (364)
-+++|++|+++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2469999999873
No 246
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.66 E-value=0.19 Score=40.67 Aligned_cols=92 Identities=18% Similarity=0.286 Sum_probs=59.3
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
..-.|.+++|.|=|.+|.-.++.++.+|+ .|++++.++-+.-.+..-|... .. +.+. -...|+
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-----------~~~a----~~~adi 81 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-----------LEEA----LRDADI 81 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHH----TTT-SE
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-----------HHHH----HhhCCE
Confidence 35688999999999999999999999999 7899988887765555545432 11 2222 246799
Q ss_pred EEECCCCHHH-HHHHHHhcccCCEEEEEcC
Q 017916 258 SFDCAGFNKT-MSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 258 vid~~g~~~~-~~~~~~~l~~~G~~v~~g~ 286 (364)
+|.++|..+. ..+-++.|+++..+...|.
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence 9999997553 3467788987777666653
No 247
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.65 E-value=0.12 Score=48.91 Aligned_cols=76 Identities=16% Similarity=0.225 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
-.+.+|||.|+|..|.+++..+...|++.+.++.++.+|.+ ++.+++-..++.+ . .+... -..+|+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~-------~-~l~~~----l~~aDiV 246 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL-------S-ELPQL----IKKADII 246 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH-------H-HHHHH----hccCCEE
Confidence 45789999999999999999999999888888888877654 4455652222222 1 12111 1468999
Q ss_pred EECCCCHHH
Q 017916 259 FDCAGFNKT 267 (364)
Q Consensus 259 id~~g~~~~ 267 (364)
|+|++++..
T Consensus 247 I~aT~a~~~ 255 (414)
T PRK13940 247 IAAVNVLEY 255 (414)
T ss_pred EECcCCCCe
Confidence 999997643
No 248
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.34 Score=42.11 Aligned_cols=105 Identities=17% Similarity=0.166 Sum_probs=59.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-H---HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~---~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...++.+...|+++++...+++.+.+ . ++..+.. ..+..+- ..+++.+.++.+... -+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-FG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999998 999999999999999954443333332222 2 2223322 1222221 123333333333322 24
Q ss_pred CccEEEECCCCH----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916 254 GIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 254 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~ 286 (364)
++|++|.++|.. + ..+.+++.++..|+++.++.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 799999988731 1 12344455566788888763
No 249
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.61 E-value=0.1 Score=49.23 Aligned_cols=93 Identities=24% Similarity=0.313 Sum_probs=57.5
Q ss_pred EEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH--cCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 185 VLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE--LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 185 VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~--lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
|+|.|+|.+|..+++.+...+-. .+++.+++.++.+.+.+ .+.. .....+- .+.. .++++. .+.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~-~l~~~~----~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPE-SLAELL----RGCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHH-HHHHHH----TTSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHH-HHHHHH----hcCCEEEE
Confidence 68899999999999999877643 68888888888665543 2221 1222222 1222 244443 45699999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEE
Q 017916 261 CAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
|+|.......+-.|+..+-++++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 999554555666677778888873
No 250
>PRK04266 fibrillarin; Provisional
Probab=95.61 E-value=0.33 Score=41.98 Aligned_cols=104 Identities=15% Similarity=0.191 Sum_probs=61.8
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-C-CCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-G-ADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g-~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+...+++|++||=.|+|. |..+..+++..+...|++++.+++..+.+.+. . ...+..+.....+.. ....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~-~~~~l----~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE-RYAHV----V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc-hhhhc----c
Confidence 457889999999988644 44566677776534799999998766644322 1 111111111111100 00011 2
Q ss_pred CCccEEEECCCCHH----HHHHHHHhcccCCEEEEE
Q 017916 253 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV 284 (364)
Q Consensus 253 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~ 284 (364)
..+|+++.....++ .+..+.+.|+|+|+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 35999985444332 367888999999999873
No 251
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.13 Score=45.29 Aligned_cols=81 Identities=27% Similarity=0.353 Sum_probs=50.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC-CC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG-AD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg-~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ +.++ .. .++..|- ...++.+.++.+.....+++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 47899998 9999999998888999 567777777665544 3333 11 1222221 1233333344333221457999
Q ss_pred EEECCCC
Q 017916 258 SFDCAGF 264 (364)
Q Consensus 258 vid~~g~ 264 (364)
+|.++|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK08267 81 LFNNAGI 87 (260)
T ss_pred EEECCCC
Confidence 9999874
No 252
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.60 E-value=0.15 Score=44.50 Aligned_cols=82 Identities=20% Similarity=0.184 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC--CC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG--AD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg--~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
.+.++||+|+ |.+|...++.+...|++ |++++++.++.+.+ ..+. .. ..+..+- ...++.+.++..... ..+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 4578999998 99999999998888995 77777777655433 3332 11 1222221 223333333333222 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 253
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.58 E-value=0.19 Score=45.71 Aligned_cols=90 Identities=27% Similarity=0.321 Sum_probs=59.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916 183 TNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (364)
Q Consensus 183 ~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~ 261 (364)
.+|.|.|+|.+|.+.+..++..|. ..|++.++++++.+.++++|...... .+..+ . -...|+||.|
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~----~----~~~aDvViia 73 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAE----A----VKGADLVILC 73 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHH----H----hcCCCEEEEC
Confidence 579999999999999988888875 36888888888888888777532110 11111 1 1357999998
Q ss_pred CCCHH---HHHHHHHhcccCCEEEEEc
Q 017916 262 AGFNK---TMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 262 ~g~~~---~~~~~~~~l~~~G~~v~~g 285 (364)
+.... .+..+...++++..++.++
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvg 100 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVG 100 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCc
Confidence 87432 2233344566666666554
No 254
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.58 E-value=0.18 Score=46.11 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=56.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 262 (364)
+|||+|+ |-+|...++.+...|. .|.++.++.++...+...++..+. .+- .+ .+.+.... .++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl--~d-~~~l~~al----~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL--SL-PETLPPSF----KGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC--CC-HHHHHHHH----CCCCEEEECC
Confidence 6999998 9999999999888898 466666666555444445554322 111 11 11232222 4689999987
Q ss_pred CCH------------HHHHHHHHhcccCC--EEEEEcC
Q 017916 263 GFN------------KTMSTALSATRAGG--KVCLVGM 286 (364)
Q Consensus 263 g~~------------~~~~~~~~~l~~~G--~~v~~g~ 286 (364)
+.. .....+++.++..| +++.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 631 11234555554444 7877664
No 255
>PRK08589 short chain dehydrogenase; Validated
Probab=95.58 E-value=0.16 Score=45.28 Aligned_cols=82 Identities=22% Similarity=0.362 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
++.++||+|+ +.+|.+.++.+...|+ .|+.++++++..+..+++ +.. ..+..|- ..++..+.+..+.+.. ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence 4679999998 9999999998888999 566666664333333333 321 1222221 2233333344443322 47
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|+++|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 9999998863
No 256
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.58 E-value=0.17 Score=43.81 Aligned_cols=80 Identities=20% Similarity=0.316 Sum_probs=49.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-HHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
+.++||+|+ +.+|.+.++.+...|++ |+.++++.++ .+.++..++. .+..|- ..++..+.+..+... -+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP-VIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQH-TDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhh-CCCccEE
Confidence 458999998 99999999998889994 5556555432 3344455542 222222 223334444443322 2469999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
+.++|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998873
No 257
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.18 Score=44.56 Aligned_cols=81 Identities=25% Similarity=0.328 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-Hc--CCC-eEEecCCCc-ccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~l--g~~-~~~~~~~~~-~~~~~~i~~~~~~~~~~ 254 (364)
++.++||+|+ |.+|...++.+...|+ .|+++++++++.+.+. ++ +.. ..+..+-.+ +++.+..+.+.. .++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 4678999997 9999999999888999 5777777776654332 32 111 122222211 222222222222 357
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 258
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.18 Score=44.10 Aligned_cols=82 Identities=24% Similarity=0.339 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|...++.+...|+ .++.++++.++.+ +.+.+ +.. ..+..+-. .+++.+..+.+.+.. +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-G 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 4678999998 9999999998888898 5677777655432 22222 211 12222221 223333333333322 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998883
No 259
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.55 E-value=0.12 Score=45.16 Aligned_cols=108 Identities=28% Similarity=0.422 Sum_probs=66.3
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
+...++.||++|+-.|.|+ |.++..|+++.|. ..|+..+..+++.+.++ ..|....+... ..|..+.. +.
T Consensus 33 ~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~--~~Dv~~~g--~~ 107 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVH--HRDVCEEG--FD 107 (247)
T ss_dssp HHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEE--ES-GGCG----S
T ss_pred HHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeE--ecceeccc--cc
Confidence 4668999999999987654 6678888887753 37899999988876654 35654211110 01211100 00
Q ss_pred HHcCCCccEEE-ECCCCHHHHHHHHHhc-ccCCEEEEEcC
Q 017916 249 KAMGTGIDVSF-DCAGFNKTMSTALSAT-RAGGKVCLVGM 286 (364)
Q Consensus 249 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~G~~v~~g~ 286 (364)
......+|.|| |--...+.+..+.+.| +++|+++.+..
T Consensus 108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred ccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 00135688876 6555567889999999 89999999864
No 260
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.12 Score=45.13 Aligned_cols=82 Identities=18% Similarity=0.217 Sum_probs=48.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
+.++||+|+ |.+|...+..+...|+++++...++.++.+ +...++.. ..+..|- ..+++.+.++...+..+.++|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 568999998 999999999888899964444443444433 33344422 1222221 2233444444443333445999
Q ss_pred EEECCC
Q 017916 258 SFDCAG 263 (364)
Q Consensus 258 vid~~g 263 (364)
+|.+.|
T Consensus 85 li~~ag 90 (253)
T PRK08642 85 VVNNAL 90 (253)
T ss_pred EEECCC
Confidence 999875
No 261
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.54 E-value=0.48 Score=40.29 Aligned_cols=92 Identities=17% Similarity=0.138 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh-HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
.|.+|||.|+|.+|..-++.+...|+ .|.+++.... ....+.+.|--..+. . ++.. .. -.++++||
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~--~---~~~~--~d-----l~~~~lVi 74 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA--R---CFDA--DI-----LEGAFLVI 74 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe--C---CCCH--HH-----hCCcEEEE
Confidence 46799999999999999999999999 5666654332 222222223111111 1 1111 11 14789999
Q ss_pred ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916 260 DCAGFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
-+.+.++.-..+....+..|..+...
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 99997656556666666777777554
No 262
>PRK07574 formate dehydrogenase; Provisional
Probab=95.53 E-value=0.25 Score=46.26 Aligned_cols=92 Identities=22% Similarity=0.287 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|.|.|.|.+|+.+++.++.+|+ .|.+.++.....+..+.++... + .+ +.++. ...|+|+-
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~----l~ell----~~aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VS----FDSLV----SVCDVVTI 254 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CC----HHHHh----hcCCEEEE
Confidence 56889999999999999999999999 6788877654444444555431 1 12 22222 35799887
Q ss_pred CCCCHHH----H-HHHHHhcccCCEEEEEcCCC
Q 017916 261 CAGFNKT----M-STALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~ 288 (364)
+....+. + ...+..|+++..++.++...
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 287 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK 287 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence 7653222 1 24678899999888886543
No 263
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.15 Score=44.38 Aligned_cols=83 Identities=19% Similarity=0.346 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CC-C---eEEecCC-CcccHHHHHHHHHHH
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GA-D---NIVKVST-NLQDIAEEVEKIQKA 250 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~-~---~~~~~~~-~~~~~~~~i~~~~~~ 250 (364)
++.+++|+|+ |.+|...++.+...|+ .|++++++.++.+.+ .++ +. . ...|... ...++.+....+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4579999998 9999999999988999 577777777654432 222 21 1 1122211 122333333334333
Q ss_pred cCCCccEEEECCCC
Q 017916 251 MGTGIDVSFDCAGF 264 (364)
Q Consensus 251 ~~~~~d~vid~~g~ 264 (364)
.+..+|++|.++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33578999998883
No 264
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.49 E-value=0.19 Score=44.91 Aligned_cols=104 Identities=19% Similarity=0.273 Sum_probs=62.4
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChh---HHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~-~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.+.++||+|+ +++|.+.++.+...|++ |+.+.++.+ +.+ +.++++....+..|- ..++..+.++.+.+. -
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE-LAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence 4679999986 48999999988889994 555655532 222 224455332222222 223344444444332 3
Q ss_pred CCccEEEECCCCH--------------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916 253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 286 (364)
+++|++|+++|.. + ..+.++..|..+|+++.++.
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS 144 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY 144 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence 5799999998731 1 23445566677789887763
No 265
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.48 E-value=0.12 Score=47.31 Aligned_cols=79 Identities=23% Similarity=0.338 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCe----EEecCCCcccHHHHHHHHHHH
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN----IVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~----~~~~~~~~~~~~~~i~~~~~~ 250 (364)
.|.++||+|+ +++|.+.++.+...|++ |+.++++.++.+.+ +++ +... ..|.. .+..+.++.+.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~---~~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFS---GDIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECC---CCcHHHHHHHHHH
Confidence 5889999998 99999988888888995 66677777765433 222 1111 12332 1233333333332
Q ss_pred c-CCCccEEEECCC
Q 017916 251 M-GTGIDVSFDCAG 263 (364)
Q Consensus 251 ~-~~~~d~vid~~g 263 (364)
. +.++|++|+++|
T Consensus 128 ~~~~didilVnnAG 141 (320)
T PLN02780 128 IEGLDVGVLINNVG 141 (320)
T ss_pred hcCCCccEEEEecC
Confidence 2 235679999876
No 266
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.47 E-value=0.19 Score=44.24 Aligned_cols=79 Identities=32% Similarity=0.318 Sum_probs=48.5
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCCeEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ .++ +-...+..|- ..++..+.++.+.+. -+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence 6899998 9999999999888999 567777766554322 222 3222233322 223344444443332 347999
Q ss_pred EEECCCC
Q 017916 258 SFDCAGF 264 (364)
Q Consensus 258 vid~~g~ 264 (364)
+|+++|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998873
No 267
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.14 Score=45.29 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++ +.. ..+..|- +.++..+.++.+. . -
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~-~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N-I 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h-h
Confidence 4778999998 9999999999999999 567777776654433 222 322 1222221 2233333343332 1 2
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|++++++|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 469999998874
No 268
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.17 Score=44.51 Aligned_cols=82 Identities=24% Similarity=0.209 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~ 254 (364)
++.++||+|+ |.+|...++.+...|++ ++++.+++++.+..+++ +.. ..+..+-. .+++...+..+... -++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence 4679999998 99999999988889995 55555666554444433 322 12222221 23333334443332 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 269
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.45 E-value=0.31 Score=43.47 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CC------eEEecCCCcccHHHHHHHHHHHcC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-AD------NIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~------~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+.+.+||+.|+|. |..+..+++....+.+.+++.+++-.+.+++.- .. .-+.+ ...|..+.++ ...
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i--~~~D~~~~l~----~~~ 143 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDL--QIDDGFKFLA----DTE 143 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEE--EECchHHHHH----hCC
Confidence 4456999998755 445666677665668999998887777766531 10 00000 0123222222 224
Q ss_pred CCccEEEE-CC---C------CHHHHHHHHHhcccCCEEEEEc
Q 017916 253 TGIDVSFD-CA---G------FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 253 ~~~d~vid-~~---g------~~~~~~~~~~~l~~~G~~v~~g 285 (364)
+.+|+||- .. + +.+.++.+.+.|+++|.++...
T Consensus 144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 68999874 32 1 2356678899999999998763
No 270
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.45 E-value=0.36 Score=40.31 Aligned_cols=99 Identities=19% Similarity=0.332 Sum_probs=63.4
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
....+.++++||=.|+|. |..++.+++......+++++.+++..+.+++ ++...+..... +... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~-------~ 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI-------E 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh-------h
Confidence 445667889999888754 6677777776644479999998887666543 44332221111 1111 1
Q ss_pred cCCCccEEEECCC---CHHHHHHHHHhcccCCEEEEE
Q 017916 251 MGTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 251 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~ 284 (364)
....+|+++.... -.+.+..+.+.|+++|+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 1346999986432 135677889999999998764
No 271
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.45 E-value=0.61 Score=42.82 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=64.8
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHH-HHHCCCCEEEEEecChhHHHH-HHHc----CCCeEEecCCCcccHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLG-ARAFGAPRIVIVDVDDYRLSV-AKEL----GADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~l-a~~~g~~~vv~~~~~~~~~~~-~~~l----g~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
+....+...+++|.|+|..|.+.+.. +...+.+.|.+.+++.++.+. ++++ +.. +..++ +..+ ..
T Consensus 120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~----~~ 190 (325)
T PRK08618 120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADE----AI 190 (325)
T ss_pred HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHH----HH
Confidence 44333456789999999888776654 456788889999888877543 3333 432 22221 2222 21
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
...|+|+.|+.+...+ .. +.+++|-++..+|...
T Consensus 191 ----~~aDiVi~aT~s~~p~-i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 191 ----EEADIIVTVTNAKTPV-FS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred ----hcCCEEEEccCCCCcc-hH-HhcCCCcEEEecCCCC
Confidence 3689999999876433 33 8899988988888543
No 272
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.45 E-value=0.53 Score=42.15 Aligned_cols=57 Identities=23% Similarity=0.383 Sum_probs=45.7
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeEE
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIV 231 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~~ 231 (364)
+...++||++|+---+|.+|.+.+.+|+.+|++.++++. .+.+|..+++.+|+.-+.
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~ 113 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVIL 113 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Confidence 457799999666644599999999999999998666663 377899999999987544
No 273
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.43 E-value=0.19 Score=46.00 Aligned_cols=81 Identities=22% Similarity=0.358 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCC---C-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA---D-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~---~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+. .+++.. . ..+..+- ...+..+.+..+. ....
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~-~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR-ALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH-HhCC
Confidence 4678999998 9999999998888898 56666676665443 334421 1 1221221 1223333333322 2245
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++|+++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 274
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.42 E-value=0.14 Score=45.03 Aligned_cols=82 Identities=18% Similarity=0.295 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+. .. ..|... .+..+-. .+++.+.+..... .-+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence 4789999998 9999999998888899 56677666654332 22 223221 2222221 2333333333322 235
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 275
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.23 Score=44.01 Aligned_cols=81 Identities=17% Similarity=0.220 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHH---cCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~---lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+ ..+. .+.. ..+..|-. ..++.+.++..... .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 5789999998 9999999999988999 5677776665432 2222 2322 12222222 22333334443322 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 7999998875
No 276
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.22 Score=43.72 Aligned_cols=82 Identities=21% Similarity=0.193 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ +++|.+.+..+...|+ .|+.+.+++++.+.+ .+ .+... .+..+- ..++..+.++.+.+. -+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence 3678999998 9999999998888999 466666766654432 22 33222 222222 122333334433332 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 277
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.16 Score=46.36 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc-----CCC-eEEecCCC-cccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL-----GAD-NIVKVSTN-LQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l-----g~~-~~~~~~~~-~~~~~~~i~~~~~~~ 251 (364)
.|.+++|+|+ +++|.+.+..+...|+ .|+.+.++.++.+ .++++ +.. ..+..|-. ..+..+....+.. .
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence 4679999998 9999999998888999 5666666665543 22222 111 12222221 1222333333322 2
Q ss_pred CCCccEEEECCCC
Q 017916 252 GTGIDVSFDCAGF 264 (364)
Q Consensus 252 ~~~~d~vid~~g~ 264 (364)
.+++|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 3579999998873
No 278
>PRK08643 acetoin reductase; Validated
Probab=95.37 E-value=0.21 Score=43.87 Aligned_cols=81 Identities=21% Similarity=0.286 Sum_probs=48.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ .+ .+... .+..+- ..++..+.++++.+. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 568999998 9999999999988999 567776666544322 22 23221 222222 122333333333322 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 279
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.37 E-value=0.47 Score=41.82 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=46.6
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh---hHHH-HHHHcC-CC-eEEecCC-CcccHHHHHHHHHHH
Q 017916 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELG-AD-NIVKVST-NLQDIAEEVEKIQKA 250 (364)
Q Consensus 181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~-~~~~lg-~~-~~~~~~~-~~~~~~~~i~~~~~~ 250 (364)
.|.++||+|+ +++|.+.++.+...|++ |+.+.++. ++.+ +.+++. .. ..+..|- ..++..+.++.+.+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4678999986 48999999988889995 55554332 2222 333442 11 1222221 223344444443332
Q ss_pred cCCCccEEEECCC
Q 017916 251 MGTGIDVSFDCAG 263 (364)
Q Consensus 251 ~~~~~d~vid~~g 263 (364)
-+++|++++++|
T Consensus 85 -~g~ld~lv~nag 96 (257)
T PRK08594 85 -VGVIHGVAHCIA 96 (257)
T ss_pred -CCCccEEEECcc
Confidence 257999999876
No 280
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.33 E-value=0.35 Score=46.20 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=65.6
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i~~~~ 248 (364)
.....+++|++||=.|+|+ |..+.++++.++...+++++.++++.+.++ .+|... +...+....+. ..+.
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~----~~~~ 305 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGP----SQWA 305 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccc----cccc
Confidence 3556778999999887644 445556666665347999999998876553 456652 21111111110 0010
Q ss_pred HHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916 249 KAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 249 ~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~ 286 (364)
....+|.|| | |+|.+ +.+..+++.|+|||+++....
T Consensus 306 --~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc 369 (426)
T TIGR00563 306 --ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC 369 (426)
T ss_pred --cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 134699987 4 55532 466778899999999997643
No 281
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=95.33 E-value=0.25 Score=47.33 Aligned_cols=106 Identities=22% Similarity=0.267 Sum_probs=64.5
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
....+++|++||=.|+|+ |..+..+++.++ ...|++++.+.++.+.++ .+|...+........++... . .
T Consensus 246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~---~-~ 320 (434)
T PRK14901 246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLEL---K-P 320 (434)
T ss_pred HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccc---c-c
Confidence 446778999998887644 445556666553 237999999998876654 46776533222211111100 0 0
Q ss_pred HcCCCccEEE-E--CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017916 250 AMGTGIDVSF-D--CAGF-------------------------NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 250 ~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g 285 (364)
...+.+|.|+ | |+|. .+.+..+++.|++||+++...
T Consensus 321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvyst 384 (434)
T PRK14901 321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYAT 384 (434)
T ss_pred cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 0124689987 4 4542 245778899999999998664
No 282
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.18 Score=44.38 Aligned_cols=80 Identities=21% Similarity=0.181 Sum_probs=49.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC---eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD---NIVKVST-NLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~---~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 255 (364)
+.+|||+|+ |.+|...+..+...|+ .|+.+++++++.+.. +++... ..+..|- ..+++.+.++.+... .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence 358999998 9999999999888899 577777776665433 333211 1222222 123333333433332 2368
Q ss_pred cEEEECCC
Q 017916 256 DVSFDCAG 263 (364)
Q Consensus 256 d~vid~~g 263 (364)
|++|.++|
T Consensus 80 d~lv~~ag 87 (257)
T PRK07024 80 DVVIANAG 87 (257)
T ss_pred CEEEECCC
Confidence 99999877
No 283
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.31 E-value=0.087 Score=47.30 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.+.++||.|+|+.+.+++.-+..+|++.+.++.++.+|.+.+ +.++... +..+.. + +.+... -..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~----~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAI----EKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhc----ccCCCEE
Confidence 578999999999999999999999998899998888776544 4444211 111110 0 111111 2468999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|+|+..
T Consensus 195 InaTp~ 200 (282)
T TIGR01809 195 VSTVPA 200 (282)
T ss_pred EECCCC
Confidence 999774
No 284
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.30 E-value=0.19 Score=44.19 Aligned_cols=81 Identities=30% Similarity=0.345 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
.+.++||+|+ |.+|.+.++.+...|+ .|+.+++++...+..+++ +... .+..+- ..++..+.++.+... -++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cCC
Confidence 4678999998 9999999999988999 566676654333333333 3321 122221 123333444444332 247
Q ss_pred ccEEEECCC
Q 017916 255 IDVSFDCAG 263 (364)
Q Consensus 255 ~d~vid~~g 263 (364)
+|++|.++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999886
No 285
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.28 E-value=0.31 Score=43.05 Aligned_cols=99 Identities=25% Similarity=0.297 Sum_probs=66.9
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+....++++++||-.|+|. |..+..+++..+...+++++.++...+.+++.-.. .++. .+. ..+. ..
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~----~~~~--~~ 91 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADI----ASWQ--PP 91 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cch----hccC--CC
Confidence 4556678889999998754 66778888877555899999999888877654221 1221 111 1111 13
Q ss_pred CCccEEEECCC------CHHHHHHHHHhcccCCEEEEE
Q 017916 253 TGIDVSFDCAG------FNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 253 ~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~ 284 (364)
..+|+|+.... ....+..+.+.|+++|.++..
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 47999986433 135778899999999999875
No 286
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.16 Score=44.69 Aligned_cols=82 Identities=24% Similarity=0.271 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc-----CCC-eEEecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l-----g~~-~~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
.+.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .+++ +.. ..+..+- ..+++.+.++.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA- 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 4678999998 9999999999989999 46666666655433 2333 211 1222221 223344444444332
Q ss_pred CCCccEEEECCCC
Q 017916 252 GTGIDVSFDCAGF 264 (364)
Q Consensus 252 ~~~~d~vid~~g~ 264 (364)
-+++|++|.++|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999998873
No 287
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.23 Score=43.95 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=48.1
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.+.++||+|+ +++|.+.++.+...|++ |+.+.+.++..+.++ +++....+..|- ..++..+.+....+. -
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-W 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-h
Confidence 4678999984 58999999998889995 555544333223332 234322232222 223444444444332 2
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|++|+++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999998864
No 288
>PRK05717 oxidoreductase; Validated
Probab=95.24 E-value=0.26 Score=43.30 Aligned_cols=82 Identities=27% Similarity=0.279 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~d 256 (364)
.|.++||+|+ |.+|..++..+...|+ .|+.++.+.++.+ ..++++.. ..+..|-. ..+..+.+.++.+.. +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 4678999998 9999999999988898 5666666554433 33445432 12222221 223333334443322 4699
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.++|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998873
No 289
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.22 E-value=0.27 Score=43.18 Aligned_cols=82 Identities=23% Similarity=0.282 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--HHHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~ 255 (364)
++.++||+|+ +++|.+.++.+...|++ |+.+.++.. ..+.++..+... .+..|- ..+++.+.++...+. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCCC
Confidence 4789999998 99999999999999995 555544332 123334445332 222222 223344444443332 2479
Q ss_pred cEEEECCCC
Q 017916 256 DVSFDCAGF 264 (364)
Q Consensus 256 d~vid~~g~ 264 (364)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
No 290
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.21 E-value=0.46 Score=42.13 Aligned_cols=104 Identities=18% Similarity=0.202 Sum_probs=66.1
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHc-C------CCeEEecCCCcccHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL-G------ADNIVKVSTNLQDIAEEVEK 246 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~l-g------~~~~~~~~~~~~~~~~~i~~ 246 (364)
+...++++++||-.|+|. |..+..+++..+. ..|++++.+++..+.+++. . ...+......-.+
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------- 138 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------- 138 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc-------
Confidence 345678899999998754 5567778877653 3799999999888877542 1 1111100011011
Q ss_pred HHHHcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcCC
Q 017916 247 IQKAMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGMG 287 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~~ 287 (364)
+ ....+.+|.|+...+ -...++++.+.|+|||+++.+...
T Consensus 139 l-p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 139 L-PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred C-CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 1 001346899876432 135788999999999999887644
No 291
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.21 E-value=0.23 Score=43.60 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=48.7
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe--EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Gag---~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
.|.++||+|++ ++|.+.++.+...|++ |+.+.++++..+.++++.... .+..|- ..++..+.+..+.+. -+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hCC
Confidence 57899999874 8999999999889995 566655544334444442211 222221 223333334333332 247
Q ss_pred ccEEEECCC
Q 017916 255 IDVSFDCAG 263 (364)
Q Consensus 255 ~d~vid~~g 263 (364)
+|++|+++|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999887
No 292
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.26 Score=43.11 Aligned_cols=81 Identities=15% Similarity=0.196 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++ +.. ..+..+- ...+..+.++.+.+.. +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 4578999998 9999999999999999 577777766554322 222 321 1222221 1233333344433322 4
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
.+|+++.+.|
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6999999887
No 293
>PRK04148 hypothetical protein; Provisional
Probab=95.20 E-value=0.14 Score=40.04 Aligned_cols=93 Identities=14% Similarity=0.231 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
.++.+|++.|.| .|...+..+...|. .|++++.+++..+.+++.+...+.+--. +.++ + + -+++|++.
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~----~-~----y~~a~liy 82 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL----E-I----YKNAKLIY 82 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH----H-H----HhcCCEEE
Confidence 456889999988 78755555557898 7999999999999898888755443111 1111 1 1 25789999
Q ss_pred ECCCCHHHHHHHHHhccc-CCEEEEE
Q 017916 260 DCAGFNKTMSTALSATRA-GGKVCLV 284 (364)
Q Consensus 260 d~~g~~~~~~~~~~~l~~-~G~~v~~ 284 (364)
..--.++....+++.-+. +.-++..
T Consensus 83 sirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 888777777666666554 3344443
No 294
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.20 E-value=0.29 Score=43.04 Aligned_cols=82 Identities=20% Similarity=0.297 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-H---HHHcCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGADN-IVKVSTNL-QDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~---~~~lg~~~-~~~~~~~~-~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|..+++.+...|++ |+.+.+++++.+ . +++.+... .+..+-.+ .++.+.+..+... -+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER-FG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 4679999998 99999999999999995 666666664433 2 23344332 12222211 2222233322221 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 295
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.26 Score=43.34 Aligned_cols=83 Identities=19% Similarity=0.337 Sum_probs=48.7
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHCC-CCEEEEEecChhH-H-HHHH---HcCCC--eEEecCCC-cccHHHHHHHHH
Q 017916 179 IGPETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYR-L-SVAK---ELGAD--NIVKVSTN-LQDIAEEVEKIQ 248 (364)
Q Consensus 179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~-~-~~~~---~lg~~--~~~~~~~~-~~~~~~~i~~~~ 248 (364)
+..+.+|||+|+ |++|.+.++-+...| + .|+.+.++.++ . ++.+ ..+.. ..+..+-. ..+..+.+++..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999998 999999998776664 7 56666665543 2 2223 33321 23333322 233333344443
Q ss_pred HHcCCCccEEEECCCC
Q 017916 249 KAMGTGIDVSFDCAGF 264 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~ 264 (364)
. .+++|++|.++|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 2 2579999987764
No 296
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.31 Score=42.32 Aligned_cols=82 Identities=23% Similarity=0.252 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|..++..+...|. .|++++++.++.+.+ + +.+.. ..+..+- ..+++.+.++.+.+. -+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-FG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 4568999998 9999999999988999 577777776554332 2 22221 1222222 123333334443332 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999873
No 297
>PLN02244 tocopherol O-methyltransferase
Probab=95.19 E-value=0.39 Score=44.40 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
+++++||=.|+|. |..+..+++..|+ .|++++.++...+.+++ .+...-+.+.. .|..+ + ....+.+
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~~~----~-~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADALN----Q-PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCccc----C-CCCCCCc
Confidence 7889999988754 5677788888888 78999999876665544 23321111100 01000 0 0013579
Q ss_pred cEEEECCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017916 256 DVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 256 d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g 285 (364)
|+|+.... . ...+.++.+.|+|||+++...
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 99986322 1 357788999999999998764
No 298
>PLN03139 formate dehydrogenase; Provisional
Probab=95.18 E-value=0.35 Score=45.31 Aligned_cols=91 Identities=21% Similarity=0.267 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|.|.|.|.+|...++.++.+|+ .|++.+.+....+..+++|+... .++ .++. ...|+|+.
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l----~ell----~~sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDL----DAML----PKCDVVVI 261 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCH----HHHH----hhCCEEEE
Confidence 57899999999999999999999999 56777766544444455554321 122 2232 24788887
Q ss_pred CCCCH-HH---H-HHHHHhcccCCEEEEEcCC
Q 017916 261 CAGFN-KT---M-STALSATRAGGKVCLVGMG 287 (364)
Q Consensus 261 ~~g~~-~~---~-~~~~~~l~~~G~~v~~g~~ 287 (364)
++... ++ + ...+..|+++..++.++.+
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCC
Confidence 66532 22 1 2467889999988888654
No 299
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.18 E-value=0.25 Score=44.02 Aligned_cols=82 Identities=24% Similarity=0.249 Sum_probs=48.4
Q ss_pred CCCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh---hHHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHc
Q 017916 180 GPETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 180 ~~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~-~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
-.+.++||+|+ +++|.+.++.+...|++ |+.+.+++ ++.+ +.++++....+..|- ..++..+.++.+.+.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK- 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-
Confidence 35678999986 48999999999899995 55554443 2222 233455322232222 223333333333322
Q ss_pred CCCccEEEECCC
Q 017916 252 GTGIDVSFDCAG 263 (364)
Q Consensus 252 ~~~~d~vid~~g 263 (364)
-+++|++|+++|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 247999999886
No 300
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.18 E-value=0.26 Score=43.69 Aligned_cols=81 Identities=17% Similarity=0.199 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.|.++||+|+ + ++|.+.++.+...|++ |+.+.+++...+.+++ .+....+..|- ..++..+.+....+. -
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-W 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-c
Confidence 4678999987 4 7999988888889995 5555555321222332 23222222222 223344444443332 2
Q ss_pred CCccEEEECCC
Q 017916 253 TGIDVSFDCAG 263 (364)
Q Consensus 253 ~~~d~vid~~g 263 (364)
+++|++|+++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 46999999987
No 301
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.087 Score=46.76 Aligned_cols=78 Identities=23% Similarity=0.251 Sum_probs=48.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
+.+++|+|+ |.+|...++.+...|+ .|++++++.++.+.. .+... ..|+ .+.+++.+.++...+. -+++|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDV-TDDASVQAAVDEVIAR-AGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEEE
Confidence 468999998 9999999998888899 466776665443221 12221 1222 2234444444444332 34799999
Q ss_pred ECCCC
Q 017916 260 DCAGF 264 (364)
Q Consensus 260 d~~g~ 264 (364)
+++|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
No 302
>PLN03075 nicotianamine synthase; Provisional
Probab=95.17 E-value=0.2 Score=44.97 Aligned_cols=98 Identities=22% Similarity=0.256 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcC-----CCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELG-----ADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg-----~~~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
.++++|+-.|.|+.++.++.+++.. ....+.+++.+++..+.++++- ...-+.+.. .|..+ ... ..+
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~~-~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VTE-SLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----ccc-ccC
Confidence 3779999999998899888888654 4447999999998887776532 222122211 12111 110 125
Q ss_pred CccEEEECC-------CCHHHHHHHHHhcccCCEEEEE
Q 017916 254 GIDVSFDCA-------GFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 254 ~~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
++|+||..+ .-.+.+..+.+.|+|||.++.=
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr 232 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLR 232 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence 799998764 2246778899999999998854
No 303
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.17 E-value=0.28 Score=43.21 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH---HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~---~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~ 254 (364)
.+.++||+|+ +.+|.+.++.+...|++ ++.+.++++..+ .+.+.+.. ..+..+-. .++..+.+++.... .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 5789999998 99999999999999995 555555422122 22333432 12222222 22333334333332 347
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 304
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.16 E-value=0.34 Score=42.72 Aligned_cols=98 Identities=22% Similarity=0.266 Sum_probs=67.9
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
.+......++++||=.|+|. |..+..+++.. +. .+++++.++...+.+++.+.+.. . .+. ..+. .
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~-~-----~d~----~~~~--~ 86 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDAR-T-----GDV----RDWK--P 86 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEE-E-----cCh----hhCC--C
Confidence 34556678889999998755 66777888776 44 79999999988888877654422 1 111 1121 1
Q ss_pred CCCccEEEECCC-----C-HHHHHHHHHhcccCCEEEEE
Q 017916 252 GTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 252 ~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~ 284 (364)
...+|+|+.... . ...+..+.+.|+|+|+++..
T Consensus 87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 357999987432 2 45677889999999999865
No 305
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.27 Score=43.12 Aligned_cols=82 Identities=20% Similarity=0.175 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+ +++ +.. ..+..+- ..+++...++...+.. +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-G 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-C
Confidence 5678999998 9999999999999999 567777766554332 222 322 1222222 2233333333333322 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998863
No 306
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.15 E-value=0.18 Score=37.68 Aligned_cols=87 Identities=18% Similarity=0.281 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|||.|+|.+|..-++.+...|+ .+.+++... +..+ +...... ..+.+ .-.++++||.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA 66 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence 57899999999999999999999999 566665554 2222 2222222 12111 1357999999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916 261 CAGFNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+.+.++.-..+.+..+..|.++....
T Consensus 67 at~d~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSEEEETT
T ss_pred cCCCHHHHHHHHHHHhhCCEEEEECC
Confidence 99976666667777777888887753
No 307
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.28 Score=43.24 Aligned_cols=81 Identities=23% Similarity=0.304 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCCe-EEecCCC-cccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~ 254 (364)
.+.++||+|+ |.+|...+..+...|+ .|+.++++.+..+..+++ +... .+..+-. ..+..+.+..+... -++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 4679999998 9999999999988999 467776665433333322 3221 2222221 12333333333322 347
Q ss_pred ccEEEECCC
Q 017916 255 IDVSFDCAG 263 (364)
Q Consensus 255 ~d~vid~~g 263 (364)
+|++|.++|
T Consensus 83 id~vi~~ag 91 (263)
T PRK08226 83 IDILVNNAG 91 (263)
T ss_pred CCEEEECCC
Confidence 999999887
No 308
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=95.15 E-value=0.56 Score=44.85 Aligned_cols=104 Identities=18% Similarity=0.231 Sum_probs=65.3
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
...++++|++||=.|+|+ |.-+.+++..++ ...|++++.++++.+.++ ++|...+.....+..+ +...
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~----l~~~-- 303 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAER----LTEY-- 303 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhh----hhhh--
Confidence 346778999998887654 555666777652 337999999999887764 4676542221111111 1111
Q ss_pred HcCCCccEEEE---CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916 250 AMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 250 ~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~ 286 (364)
..+.||.|+- |+|.+ +.+..+++.|++||+++....
T Consensus 304 -~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 367 (431)
T PRK14903 304 -VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTC 367 (431)
T ss_pred -hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 1346999873 44431 236678899999999887653
No 309
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.15 E-value=0.35 Score=42.89 Aligned_cols=105 Identities=17% Similarity=0.222 Sum_probs=66.6
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHc
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
.+...+++++.+||=.|+|. |..+..+++..++ .+++++.+++..+.+++.... ..+.+.. .++.+ . ...
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~----~-~~~ 114 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK----K-DFP 114 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc----C-CCC
Confidence 34667889999999998754 5566777777777 799999998887777653211 1111100 11110 0 001
Q ss_pred CCCccEEEEC--C---C---CHHHHHHHHHhcccCCEEEEEcC
Q 017916 252 GTGIDVSFDC--A---G---FNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 252 ~~~~d~vid~--~---g---~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
...+|+|+.. . . -...++.+.+.|+|+|+++....
T Consensus 115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 3469999862 1 1 13467788999999999998753
No 310
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.28 Score=42.92 Aligned_cols=82 Identities=26% Similarity=0.334 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+. +++.+.. ..+..+-. ..++.+.+....... +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 4679999998 9999999998888898 56777776655332 2333432 12222221 223333333333222 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 311
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.12 E-value=0.12 Score=45.02 Aligned_cols=105 Identities=24% Similarity=0.360 Sum_probs=62.6
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
+....++|++||=.|+|. |..+..+++..+. ..|+++|.+++-.+.+++ .+...+.-...+.+++. +
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~-- 112 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----F-- 112 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S--
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----C--
Confidence 446778999999987644 6678888888764 379999999988877764 23322211111112211 0
Q ss_pred HcCCCccEEEECCCC------HHHHHHHHHhcccCCEEEEEcCCC
Q 017916 250 AMGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 250 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
....+|+|..+.|- ...+.++.+.|+|||+++.+..+.
T Consensus 113 -~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~ 156 (233)
T PF01209_consen 113 -PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK 156 (233)
T ss_dssp --TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred -CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence 13579999877653 467889999999999999887543
No 312
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.18 Score=43.22 Aligned_cols=77 Identities=27% Similarity=0.324 Sum_probs=48.7
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH-HcCCCccEEEE
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDVSFD 260 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~d~vid 260 (364)
.+++|+|+ |.+|...++.+...|+ .++.++++.++.+.++..+.. .+..+-... +.++++.. ..+.++|++|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~---~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAE-ALALDVADP---ASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccce-EEEecCCCH---HHHHHHHHHhcCCCCCEEEE
Confidence 47899997 9999999988878898 567777777766666555543 222222221 12223221 12347999999
Q ss_pred CCCC
Q 017916 261 CAGF 264 (364)
Q Consensus 261 ~~g~ 264 (364)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 8774
No 313
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.11 E-value=0.21 Score=41.60 Aligned_cols=94 Identities=20% Similarity=0.277 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
++++||-.|+|. |..++.+++......|++++.+++..+.++ +.+...+..... +..+ +. ....+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCcc
Confidence 378999888654 556666666654447999999987665543 455543221111 2211 11 135799
Q ss_pred EEEECC-CC-HHHHHHHHHhcccCCEEEEE
Q 017916 257 VSFDCA-GF-NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 257 ~vid~~-g~-~~~~~~~~~~l~~~G~~v~~ 284 (364)
+|+... .. .+.++.+.+.|+++|+++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 988542 21 45667788999999999876
No 314
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.10 E-value=0.081 Score=47.21 Aligned_cols=47 Identities=28% Similarity=0.339 Sum_probs=39.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG 226 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg 226 (364)
.+|++++|.|+|+.+.+++.-++..|++.+.++.++.+|.+.+ +.++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 4689999999999999999999999998899998888886554 4444
No 315
>PLN02253 xanthoxin dehydrogenase
Probab=95.10 E-value=0.22 Score=44.50 Aligned_cols=82 Identities=22% Similarity=0.276 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCC--C-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~--~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
.+.++||+|+ |.+|.+.++.+...|+ .|+.++.++++.+ +..+++. . ..+..|- ..+++.+.+..+.+. -++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence 4678999998 9999999988888899 5666666554433 3334432 1 1222221 223333444444332 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|+++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998873
No 316
>PRK07985 oxidoreductase; Provisional
Probab=95.09 E-value=0.61 Score=42.07 Aligned_cols=81 Identities=20% Similarity=0.215 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC--hhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~--~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~ 251 (364)
++.++||+|+ +.+|.+.++.+...|++ |+.+..+ .++.+. +++.+... .+..+-. .++..+.++.....
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA- 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 5679999998 99999999999999995 4554332 222222 22334321 2222222 23333333433332
Q ss_pred CCCccEEEECCC
Q 017916 252 GTGIDVSFDCAG 263 (364)
Q Consensus 252 ~~~~d~vid~~g 263 (364)
-+++|+++.+.|
T Consensus 126 ~g~id~lv~~Ag 137 (294)
T PRK07985 126 LGGLDIMALVAG 137 (294)
T ss_pred hCCCCEEEECCC
Confidence 347999998876
No 317
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.3 Score=43.47 Aligned_cols=81 Identities=22% Similarity=0.321 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcC-----CC-eEEecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELG-----AD-NIVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg-----~~-~~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
++.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+. .+++. .. .++..+- ..+++.+.++...+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW- 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 4679999998 9999999999999999 56777666554332 22221 11 1221221 122333333333222
Q ss_pred CCCccEEEECCC
Q 017916 252 GTGIDVSFDCAG 263 (364)
Q Consensus 252 ~~~~d~vid~~g 263 (364)
.+++|++|.++|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 247899999887
No 318
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.07 E-value=0.31 Score=42.89 Aligned_cols=82 Identities=23% Similarity=0.264 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+... ..+.. ..+..+-. .+++.+.+..+... .+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 5689999998 9999999999988999 5677777766544332 22222 12222221 22333333333322 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|.+|.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 319
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.06 E-value=0.25 Score=43.12 Aligned_cols=83 Identities=20% Similarity=0.214 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-H---HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~---~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...+..+...|+++++...++.++.+ . ++..+... .+..+- ..++..+.++...+.. +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-G 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 4678999998 999999999999999965444445544432 2 22334321 222222 2233333333333322 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998873
No 320
>PRK12743 oxidoreductase; Provisional
Probab=95.04 E-value=0.28 Score=43.12 Aligned_cols=81 Identities=19% Similarity=0.188 Sum_probs=47.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH----HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~----~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~ 254 (364)
+.+|||+|+ +.+|..+++.+...|+++++...++.++.+ .++..+.. ..+..+-. .+++.+.+.++... -++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 468999998 999999999999999964444344443322 22334432 22222221 23333333333332 247
Q ss_pred ccEEEECCC
Q 017916 255 IDVSFDCAG 263 (364)
Q Consensus 255 ~d~vid~~g 263 (364)
+|++|.+.|
T Consensus 81 id~li~~ag 89 (256)
T PRK12743 81 IDVLVNNAG 89 (256)
T ss_pred CCEEEECCC
Confidence 999999887
No 321
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.02 E-value=0.3 Score=42.91 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=47.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH----cCCC--eEEecCCCc-ccHHHHHHHHHHHcC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGAD--NIVKVSTNL-QDIAEEVEKIQKAMG 252 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~----lg~~--~~~~~~~~~-~~~~~~i~~~~~~~~ 252 (364)
+.+|||+|+ |.+|.+.+..+...|+ .++.++++.++.+.. .+ .+.. ..+..+-.+ ++....+.++... -
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 468999998 9999999998888899 567776665543322 22 2211 122222221 2223333333222 2
Q ss_pred CCccEEEECCC
Q 017916 253 TGIDVSFDCAG 263 (364)
Q Consensus 253 ~~~d~vid~~g 263 (364)
+++|++|.+.|
T Consensus 80 ~~id~vv~~ag 90 (259)
T PRK12384 80 GRVDLLVYNAG 90 (259)
T ss_pred CCCCEEEECCC
Confidence 47999999887
No 322
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.25 Score=43.19 Aligned_cols=82 Identities=23% Similarity=0.246 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc--CCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL--GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l--g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~ 254 (364)
++.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+. ...+ +.. ..+..+-. .++..+.+..+.+. -++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 4678999998 9999999988888898 56666666554332 2222 221 22222222 22333333333322 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998883
No 323
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.96 E-value=0.48 Score=40.60 Aligned_cols=101 Identities=18% Similarity=0.214 Sum_probs=61.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEE------------ecCCCcccHHHHHH
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIV------------KVSTNLQDIAEEVE 245 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~------------~~~~~~~~~~~~i~ 245 (364)
..++.+||+.|+|. |.-++.||. .|. .|++++.++...+.+ ++.+..... .+.-.-.|+.+
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--- 105 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA--- 105 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC---
Confidence 35778999998866 778888875 699 699999999877764 333321100 00000001100
Q ss_pred HHHHHcCCCccEEEECCCC--------HHHHHHHHHhcccCCEEEEEcC
Q 017916 246 KIQKAMGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 246 ~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+.......+|.++|+..- ...++.+.++|+|+|+++....
T Consensus 106 -~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 106 -LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred -CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 000012468999996431 2457789999999998776654
No 324
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.95 E-value=0.33 Score=42.04 Aligned_cols=82 Identities=23% Similarity=0.287 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEE-ecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIV-KVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~-~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.+|||+|+ |.+|...++.+...|.+ |+++.+++++.+.. +..+....+ ..+- ...++.+.++.+... -.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA-FG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 3578999998 99999999998888995 77777776654332 233433211 1111 123333444433322 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|.+|.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998863
No 325
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=94.95 E-value=0.51 Score=45.36 Aligned_cols=104 Identities=24% Similarity=0.321 Sum_probs=64.1
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI 247 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~ 247 (364)
.+.....++|++||=.|+|. |..+..+++.+ +...|++++.++++.+.++ .+|...+........+ +
T Consensus 242 ~~~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~-------~ 313 (445)
T PRK14904 242 ACLLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARS-------F 313 (445)
T ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccc-------c
Confidence 33556778999999887644 33444555544 2237999999998876554 4676542221111111 1
Q ss_pred HHHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916 248 QKAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 248 ~~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~ 286 (364)
. ....+|.|+ | |+|++ ..+..+++.|++||+++....
T Consensus 314 ~--~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvystc 378 (445)
T PRK14904 314 S--PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYATC 378 (445)
T ss_pred c--cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 1 134699987 4 55532 257778889999999997653
No 326
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.36 Score=42.39 Aligned_cols=82 Identities=17% Similarity=0.277 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh-H-HHHH---HHcCCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-R-LSVA---KELGAD-NIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~-~-~~~~---~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.+.++||+|+ +++|.+.++.+...|++ ++.++++.+ . .+.. +..+.. ..+..+- ..++..+.+...... -
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4678999998 99999999999999994 556655432 2 2222 233422 1222222 223333334443332 3
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 579999999873
No 327
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.94 E-value=0.3 Score=41.98 Aligned_cols=96 Identities=22% Similarity=0.260 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE--EecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI--VKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
-+|-+||=.|+|+ |+.+..+| ++|+ .|.++|.+++..+.++.-..... ++|... .+.++.. .++.||+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~------~~edl~~-~~~~FDv 127 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA------TVEDLAS-AGGQFDV 127 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchhh------hHHHHHh-cCCCccE
Confidence 4788999988754 45555554 4577 79999999999888874322221 233321 2333332 2478999
Q ss_pred EEE-----CCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916 258 SFD-----CAGFN-KTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 258 vid-----~~g~~-~~~~~~~~~l~~~G~~v~~g 285 (364)
|++ .+..+ ..+..+.+.++|+|.+...-
T Consensus 128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 986 34444 35667999999999887664
No 328
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.93 E-value=0.29 Score=42.88 Aligned_cols=81 Identities=27% Similarity=0.378 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.+|||+|+ |.+|...++.+...|+ .|++++++.++.+.. .++ +.. ..+..+- ..+++.+.++.+... .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 3578999998 9999999998888899 566676666554322 222 322 1222222 223333333333322 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++|.++|
T Consensus 81 ~~d~vi~~a~ 90 (258)
T PRK12429 81 GVDILVNNAG 90 (258)
T ss_pred CCCEEEECCC
Confidence 7999999886
No 329
>PRK06194 hypothetical protein; Provisional
Probab=94.93 E-value=0.23 Score=44.42 Aligned_cols=82 Identities=23% Similarity=0.326 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+ ...++ +... .+..+-. .+++.+.+..+.+. .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-FG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 3578999998 9999999998888999 5666766654433 22332 3221 1222221 22333333333222 34
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 330
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.92 E-value=0.25 Score=41.94 Aligned_cols=103 Identities=23% Similarity=0.296 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc-CC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM-GT 253 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 253 (364)
....+||-.|.+. |..++.+|+.+.- ..+++++.++++.+.+++ .|...-+.+. ..+..+.+..+.... .+
T Consensus 44 ~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~--~gda~~~l~~l~~~~~~~ 120 (205)
T PF01596_consen 44 TRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVI--EGDALEVLPELANDGEEG 120 (205)
T ss_dssp HT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEE--ES-HHHHHHHHHHTTTTT
T ss_pred cCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEE--EeccHhhHHHHHhccCCC
Confidence 3456999998643 8899999998742 389999999988777654 4543222211 145555566554322 24
Q ss_pred CccEEE-ECCCC--HHHHHHHHHhcccCCEEEEEc
Q 017916 254 GIDVSF-DCAGF--NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 254 ~~d~vi-d~~g~--~~~~~~~~~~l~~~G~~v~~g 285 (364)
.||+|| |+.=. ...+..++++|+++|.++.=+
T Consensus 121 ~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 121 QFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp SEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred ceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 799987 55321 356778889999999988754
No 331
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.58 Score=40.93 Aligned_cols=31 Identities=26% Similarity=0.205 Sum_probs=25.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV 212 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~ 212 (364)
.+.++||+|+ +.+|.+.++.+...|++ |+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~ 34 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIH 34 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEE
Confidence 4679999998 99999999999999995 4443
No 332
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.91 E-value=0.65 Score=37.66 Aligned_cols=87 Identities=14% Similarity=0.109 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|||.|+|.+|..-++.+...|++ |.+++ ++..+.+++++...... ..+ ....-.++|+||-
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~~-----~~~-------~~~dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWKQ-----KTF-------SNDDIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEEe-----ccc-------ChhcCCCceEEEE
Confidence 578999999999999888888888995 55553 33333334454222211 111 1111257899999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEE
Q 017916 261 CAGFNKTMSTALSATRAGGKVCL 283 (364)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~ 283 (364)
++++.+ .+..+..++....++.
T Consensus 77 aT~d~e-~N~~i~~~a~~~~~vn 98 (157)
T PRK06719 77 ATNQHA-VNMMVKQAAHDFQWVN 98 (157)
T ss_pred CCCCHH-HHHHHHHHHHHCCcEE
Confidence 998654 4555554444343443
No 333
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.23 Score=44.29 Aligned_cols=81 Identities=27% Similarity=0.318 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|.+.+..+...|++ |+.++++.++.+. .++ .+... .+..|- ...++.+.+....+. -+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999998 99999999999899994 6666666554432 222 23321 222221 122333333333222 34
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++|+++|
T Consensus 83 ~id~li~nAg 92 (275)
T PRK05876 83 HVDVVFSNAG 92 (275)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 334
>PRK06398 aldose dehydrogenase; Validated
Probab=94.90 E-value=0.19 Score=44.35 Aligned_cols=76 Identities=16% Similarity=0.302 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.|.++||+|+ +.+|.+.+..+...|+ .|+.++++..+.. .. ..+..|- ..++..+.+...... -+++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~-~~~~~D~~~~~~i~~~~~~~~~~-~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DV-DYFKVDVSNKEQVIKGIDYVISK-YGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ce-EEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 4679999998 9999999999999999 4666665543321 11 1121221 223333344443332 3469999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|+++|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998873
No 335
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.90 E-value=0.94 Score=39.47 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=59.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH-H---HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-S---VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~-~---~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
+.++||+|+ |.+|...++.+...|+++++....+.++. + .++..+.. ..+..+- ...++...++.+.... .+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-GV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-CC
Confidence 578999998 99999999988889996444443332222 2 22333332 1222221 1223333344443322 47
Q ss_pred ccEEEECCCC----------HH---------------HHHHHHHhcccCCEEEEEcC
Q 017916 255 IDVSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 255 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~ 286 (364)
+|++|.++|. .+ ..+.+.+.++..|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS 141 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence 9999999873 11 12344556667788988874
No 336
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.23 Score=45.01 Aligned_cols=81 Identities=22% Similarity=0.310 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc-----CCC-eEEecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l-----g~~-~~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
.+.+|||+|+ |.+|..+++.+...|+ .++.+.++.++.+. .+.+ +.. ..+..+- ..++..+.+.++...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~- 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA- 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence 5689999998 9999999998888899 46666666554332 2222 111 1222221 112333333333222
Q ss_pred CCCccEEEECCC
Q 017916 252 GTGIDVSFDCAG 263 (364)
Q Consensus 252 ~~~~d~vid~~g 263 (364)
-+++|++|.++|
T Consensus 93 ~~~iD~li~nAg 104 (306)
T PRK06197 93 YPRIDLLINNAG 104 (306)
T ss_pred CCCCCEEEECCc
Confidence 247999999887
No 337
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.88 E-value=0.35 Score=43.07 Aligned_cols=81 Identities=21% Similarity=0.294 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|.+.+..+...|+ .|+.++++.++.+ +.+++ +.. ..+..+-. ..++.+.+..+... -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999998 9999999999989999 5666766655433 22222 322 12222221 12233333333222 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++|.++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 338
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.86 E-value=0.19 Score=45.11 Aligned_cols=43 Identities=28% Similarity=0.400 Sum_probs=36.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA 222 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~ 222 (364)
..+.+|+|.|+|++|.+++..+...|++.+.+++++.+|.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3567999999999999999999999998899998888776544
No 339
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.86 E-value=0.33 Score=42.84 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHH-HHHH----cCCC-eEEecCCC-cccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS-VAKE----LGAD-NIVKVSTN-LQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~-~~~~----lg~~-~~~~~~~~-~~~~~~~i~~~~~~~ 251 (364)
++.++||+|+ +++|.+.+..+...|++ |+.+ .++.++.+ ..++ .+.. ..+..|-. .+++.+.+..+.+.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED- 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence 4789999998 99999999999999995 4444 33444332 2222 2322 22222222 23333333333322
Q ss_pred CCCccEEEECCC
Q 017916 252 GTGIDVSFDCAG 263 (364)
Q Consensus 252 ~~~~d~vid~~g 263 (364)
-+++|++|+++|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247999999875
No 340
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.73 Score=41.47 Aligned_cols=83 Identities=20% Similarity=0.191 Sum_probs=47.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHH----HHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHc
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRL----SVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAM 251 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~----~~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~ 251 (364)
-++.++||+|+ |.+|...+..+...|++ |+.+.++. ... +.++..+... .+..|-. ..++.+.++.+...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~- 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE- 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 35679999998 99999999888888995 55554443 211 1222223222 2222222 22333333333332
Q ss_pred CCCccEEEECCCC
Q 017916 252 GTGIDVSFDCAGF 264 (364)
Q Consensus 252 ~~~~d~vid~~g~ 264 (364)
.+++|++|.++|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 2479999988773
No 341
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=94.84 E-value=0.18 Score=42.59 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=61.2
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
+.....++.+||-.|+|. |..+..+|+. |. .|++++.+++-.+.+++ .+...+... ..++. .+.
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~---~~d~~----~~~-- 91 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTA---VVDLN----NLT-- 91 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEE---ecChh----hCC--
Confidence 444556778999998765 6677788875 76 78999999876665543 233211100 01111 111
Q ss_pred cCCCccEEEECCC----C----HHHHHHHHHhcccCCEEEEE
Q 017916 251 MGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 251 ~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~ 284 (364)
....+|+|+.... . ...+..+.+.|+|+|.++.+
T Consensus 92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1346999987532 1 25667888899999996554
No 342
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=94.83 E-value=0.55 Score=45.15 Aligned_cols=103 Identities=22% Similarity=0.319 Sum_probs=63.4
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
....++++++||=.|+|. |..++.+++.. +...+++++.++++.+.++ .+|...+..... |..+....+
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~~~~~~-- 317 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKAL---DARKVHEKF-- 317 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC---Ccccccchh--
Confidence 446778899988887644 44555666665 3347999999998876654 456654222211 111111111
Q ss_pred HcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916 250 AMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 250 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g 285 (364)
...+|.|+ | |+|.+ +.+..+++.|++||+++...
T Consensus 318 --~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvyst 379 (444)
T PRK14902 318 --AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYST 379 (444)
T ss_pred --cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEc
Confidence 24699986 4 44421 35777889999999998654
No 343
>PRK08264 short chain dehydrogenase; Validated
Probab=94.82 E-value=0.17 Score=43.93 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.+.++||+|+ |.+|...++.+...|++.|+.+.++.++.+. .+.. ..+..+-.+ .+.++++.+. -..+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~-~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEA-ASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHh-cCCCCEE
Confidence 4578999998 9999999999999998456766666554432 2221 122212111 1223333322 2468999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|.++|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 998875
No 344
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.82 E-value=0.64 Score=40.58 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.+.++||+|+ |.+|...+..+...|+ .++.++++. ....+.. ..+..+- ..+++.+.+..+... .+++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4678999998 9999999998888999 566665544 1222221 1222221 123333334333322 246999
Q ss_pred EEECCCC
Q 017916 258 SFDCAGF 264 (364)
Q Consensus 258 vid~~g~ 264 (364)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
No 345
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.3 Score=42.82 Aligned_cols=77 Identities=22% Similarity=0.222 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.+.++||+|+ |.+|...++.+...|+ .|+.++++.++ +..+.. ..+..+- ..+++.+.+..+.+. .+++|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4789999998 9999999999988999 56666665544 112211 1222221 122333333333332 247899
Q ss_pred EEECCC
Q 017916 258 SFDCAG 263 (364)
Q Consensus 258 vid~~g 263 (364)
+|.++|
T Consensus 79 vi~~ag 84 (252)
T PRK07856 79 LVNNAG 84 (252)
T ss_pred EEECCC
Confidence 999887
No 346
>PRK06181 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.42 Score=42.09 Aligned_cols=81 Identities=25% Similarity=0.363 Sum_probs=48.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
+.+|||+|+ |.+|..+++.+...|+ .|+.+++++++.+. .+ ..+... ++..+- ..+++.+.++...+. -++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 357999998 9999999999989998 57777776654332 22 223321 122221 122333333333322 246
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 9999999873
No 347
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.79 E-value=0.38 Score=42.20 Aligned_cols=82 Identities=18% Similarity=0.254 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--HHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 255 (364)
.|.++||+|+ +.+|.+.++.+...|++ |+.++.... ..+.+++++.. ..+..+- ..++..+.+.++.+. .+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence 4679999998 99999999999999995 555544322 22333344432 1222222 223344444444332 2479
Q ss_pred cEEEECCCC
Q 017916 256 DVSFDCAGF 264 (364)
Q Consensus 256 d~vid~~g~ 264 (364)
|++|+++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 348
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.77 E-value=0.22 Score=44.33 Aligned_cols=84 Identities=25% Similarity=0.255 Sum_probs=52.1
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC----eEEecCC-CcccHHHHHHHHHH
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD----NIVKVST-NLQDIAEEVEKIQK 249 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~----~~~~~~~-~~~~~~~~i~~~~~ 249 (364)
-.|..+||+|+ .++|.+.+..+...|+ .|+.+.++.++.+.. +. .+.. ..+..+- ..++..+.+.....
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35778899987 9999999999999999 566666776664332 22 2221 1122222 22333333433333
Q ss_pred HcCCCccEEEECCCC
Q 017916 250 AMGTGIDVSFDCAGF 264 (364)
Q Consensus 250 ~~~~~~d~vid~~g~ 264 (364)
...+++|+.++.+|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 335689999998774
No 349
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.43 Score=41.58 Aligned_cols=80 Identities=24% Similarity=0.299 Sum_probs=48.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-Hc-----CCC-eEEecCCC-cccHHHHHHHHHHHcC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL-----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG 252 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~l-----g~~-~~~~~~~~-~~~~~~~i~~~~~~~~ 252 (364)
+.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+. .+ +.. ..+..|-. .+++.+.++.+... -
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE-L 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 468999998 9999988888888898 5666667766544332 11 211 12222222 23334444443332 3
Q ss_pred CCccEEEECCC
Q 017916 253 TGIDVSFDCAG 263 (364)
Q Consensus 253 ~~~d~vid~~g 263 (364)
+++|++|.++|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 47999999886
No 350
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=94.74 E-value=0.55 Score=39.50 Aligned_cols=77 Identities=29% Similarity=0.370 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
++.+++|.|+ |.+|..++..+...|+ .++.+.++.++.+.+ +.+ +.. +...+. .+.. .+.+.. .+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----KG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----hc
Confidence 5689999997 9999988888888887 667777776665433 223 222 111111 1111 122222 36
Q ss_pred ccEEEECCCCHH
Q 017916 255 IDVSFDCAGFNK 266 (364)
Q Consensus 255 ~d~vid~~g~~~ 266 (364)
.|++|.+...+.
T Consensus 98 ~diVi~at~~g~ 109 (194)
T cd01078 98 ADVVFAAGAAGV 109 (194)
T ss_pred CCEEEECCCCCc
Confidence 899999877544
No 351
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.74 E-value=0.43 Score=41.59 Aligned_cols=81 Identities=19% Similarity=0.296 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...++.+...|+ .|+.++++.++...+ +..+.. ..+..+- ..+++.+.++.+.+. -.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999998 9999999999988999 566666665443322 222322 1222222 122333334433322 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 352
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.73 E-value=0.34 Score=42.32 Aligned_cols=79 Identities=27% Similarity=0.323 Sum_probs=48.9
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCccEEE
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
+|+|+|+ |.+|.+.+..+...|+ .|++++++.++.+.+. .++... .+..+- ..+++.+.+..+.+. .+++|.+|
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence 6899998 9999999999988999 5777777776655443 344321 111111 122333333333222 24799999
Q ss_pred ECCCC
Q 017916 260 DCAGF 264 (364)
Q Consensus 260 d~~g~ 264 (364)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98763
No 353
>PRK06720 hypothetical protein; Provisional
Probab=94.72 E-value=0.7 Score=37.98 Aligned_cols=81 Identities=25% Similarity=0.314 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH---cCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~---lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
++.+++|+|+ +++|...+..+...|+ .|+.++.+.++.+. .++ .+... .+..+-. .+++.+.+...... -+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 5778999998 8899999988888898 57777766554322 222 24321 2222221 23333333333322 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|++++++|
T Consensus 93 ~iDilVnnAG 102 (169)
T PRK06720 93 RIDMLFQNAG 102 (169)
T ss_pred CCCEEEECCC
Confidence 7899999888
No 354
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.093 Score=46.08 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=45.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC-eEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
+.++||+|+ |.+|..+++.+...|+ .++++.+++++.+.+. ..+.. .++..+- .+. +.++.. ...++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCCC
Confidence 357999998 9999999999999999 4566666655443332 22322 1111111 111 123222 13479
Q ss_pred cEEEECCC
Q 017916 256 DVSFDCAG 263 (364)
Q Consensus 256 d~vid~~g 263 (364)
|++|.++|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999887
No 355
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.70 E-value=0.34 Score=42.51 Aligned_cols=82 Identities=29% Similarity=0.473 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ +.+|.+.++.+...|+ .++.++++.++.+ ...++ +.. ..+..+-. ..++.+.+..+... -+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence 4678999998 9999999999988999 5666766655433 22222 322 12222222 22333333333222 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999998873
No 356
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.68 E-value=0.2 Score=43.41 Aligned_cols=92 Identities=14% Similarity=0.257 Sum_probs=55.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-------------------hHH----HHHHHcCCCe-EEecCCCc
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGADN-IVKVSTNL 237 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-------------------~~~----~~~~~lg~~~-~~~~~~~~ 237 (364)
+.+|+|.|.|++|..++..+.+.|...+..++.+. .|. +.+++++..- +..++
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--- 87 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--- 87 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence 46899999999999999999999998888887432 111 1122333221 11111
Q ss_pred ccHH-HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC
Q 017916 238 QDIA-EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 279 (364)
Q Consensus 238 ~~~~-~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G 279 (364)
..+. +....+. ..++|+||||..+......+.+.....+
T Consensus 88 ~~i~~~~~~~l~---~~~~D~VvdaiD~~~~k~~L~~~c~~~~ 127 (231)
T cd00755 88 EFLTPDNSEDLL---GGDPDFVVDAIDSIRAKVALIAYCRKRK 127 (231)
T ss_pred eecCHhHHHHHh---cCCCCEEEEcCCCHHHHHHHHHHHHHhC
Confidence 1111 1122221 3469999999998766555666555554
No 357
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=94.67 E-value=0.98 Score=43.55 Aligned_cols=100 Identities=23% Similarity=0.303 Sum_probs=64.1
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
.+++|++||=..|++ |-=+.++|..++ -..+++.+.+..|...+ +++|+..+...+.....+.+ ...
T Consensus 110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~-------~~~ 181 (470)
T PRK11933 110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGA-------ALP 181 (470)
T ss_pred CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhh-------hch
Confidence 678999998886543 333456666553 23789999999886554 56788765443332222211 113
Q ss_pred CCccEEE-E--CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017916 253 TGIDVSF-D--CAGF-------------------------NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 253 ~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g 285 (364)
..||.|+ | |+|. .+.+..+++.|++||+++..-
T Consensus 182 ~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYST 242 (470)
T PRK11933 182 ETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYST 242 (470)
T ss_pred hhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEC
Confidence 4688876 5 6654 246677889999999998654
No 358
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.66 E-value=0.46 Score=41.53 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=29.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~ 214 (364)
+.+|+|.|+|++|..+++.+.+.|...+..+|.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 56 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDF 56 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeC
Confidence 478999999999999999999999988888764
No 359
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.64 E-value=0.57 Score=41.34 Aligned_cols=95 Identities=23% Similarity=0.317 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHHHcCCC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
.++.+||-.|+|. |..+..+++. |. .|++++.+++..+.+++. |.. .+.... .+.. ++.....+.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~----~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQ----DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHH----HHhhhcCCC
Confidence 5567888888755 6777888875 66 689999999888777652 322 111111 1111 111112457
Q ss_pred ccEEEECC-----CC-HHHHHHHHHhcccCCEEEEE
Q 017916 255 IDVSFDCA-----GF-NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 255 ~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~ 284 (364)
+|+|+... .. ...+..+.+.|+|+|+++.+
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 99998532 11 35678899999999999765
No 360
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.4 Score=43.08 Aligned_cols=83 Identities=27% Similarity=0.320 Sum_probs=48.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh---------hH-HHHHHHc---CCCe-EEecCC-CcccHHHH
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---------YR-LSVAKEL---GADN-IVKVST-NLQDIAEE 243 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~---------~~-~~~~~~l---g~~~-~~~~~~-~~~~~~~~ 243 (364)
-++.++||+|+ +++|.+.++.+...|++ ++.++.+. ++ .+..+++ +... .+..|- ..++..+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 35789999998 99999999988889995 55554432 22 2222332 3221 222221 22333444
Q ss_pred HHHHHHHcCCCccEEEECCCC
Q 017916 244 VEKIQKAMGTGIDVSFDCAGF 264 (364)
Q Consensus 244 i~~~~~~~~~~~d~vid~~g~ 264 (364)
++...+. -+++|++|+++|.
T Consensus 83 ~~~~~~~-~g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVET-FGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHh-cCCCCEEEECCCC
Confidence 4444332 2479999998874
No 361
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.62 E-value=0.37 Score=42.31 Aligned_cols=81 Identities=30% Similarity=0.338 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
.+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ .+++.. ..+..+- ...+..+.++.+... -+++|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 3578999998 9999999999998999 567777776655433 344422 1222221 223334444443332 24799
Q ss_pred EEEECCC
Q 017916 257 VSFDCAG 263 (364)
Q Consensus 257 ~vid~~g 263 (364)
++|.+.|
T Consensus 83 ~li~~ag 89 (257)
T PRK07067 83 ILFNNAA 89 (257)
T ss_pred EEEECCC
Confidence 9999876
No 362
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.59 E-value=0.45 Score=37.41 Aligned_cols=94 Identities=22% Similarity=0.301 Sum_probs=57.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-------------------hHHH----HHHHcCC-CeEEecCCCc
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRLS----VAKELGA-DNIVKVSTNL 237 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-------------------~~~~----~~~~lg~-~~~~~~~~~~ 237 (364)
..+|+|.|+|++|..++..+...|...+..+|... .|.+ .++++.. ..+..+..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 46899999999999999999889998888886321 1222 2333432 22222211
Q ss_pred ccH-HHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEE
Q 017916 238 QDI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVC 282 (364)
Q Consensus 238 ~~~-~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v 282 (364)
++ .+...++. .++|+||+|..+.+....+.+.++..+.-.
T Consensus 80 -~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~ 120 (135)
T PF00899_consen 80 -KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPF 120 (135)
T ss_dssp -HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EE
T ss_pred -ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCE
Confidence 22 22233332 368999999998766666666666555433
No 363
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.57 E-value=0.84 Score=36.20 Aligned_cols=91 Identities=21% Similarity=0.328 Sum_probs=53.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-------------------hHH----HHHHHcCCC-eEEecCCCccc
Q 017916 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGAD-NIVKVSTNLQD 239 (364)
Q Consensus 184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-------------------~~~----~~~~~lg~~-~~~~~~~~~~~ 239 (364)
+|+|.|+|++|...+..+...|...+..++.+. .|. +.++++... .+..++..-.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 588999999999999999999998888886431 121 222333322 22112111000
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCE
Q 017916 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (364)
Q Consensus 240 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (364)
. ...+. -.++|+||+|..+......+.+.++..+.
T Consensus 81 -~-~~~~~----~~~~diVi~~~d~~~~~~~l~~~~~~~~i 115 (143)
T cd01483 81 -D-NLDDF----LDGVDLVIDAIDNIAVRRALNRACKELGI 115 (143)
T ss_pred -h-hHHHH----hcCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 0 11111 25799999999976655555555555543
No 364
>PRK03612 spermidine synthase; Provisional
Probab=94.57 E-value=0.48 Score=46.50 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CCeEE--ecCC-----CcccHHHHHHHHHHHc
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADNIV--KVST-----NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~~~~--~~~~-----~~~~~~~~i~~~~~~~ 251 (364)
++.++||+.|+|. |..+..+++.-+.+.+..++.+++-.+.+++.. ..... .+++ ...|.. ++....
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~----~~l~~~ 370 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAF----NWLRKL 370 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHH----HHHHhC
Confidence 5568999998754 566667777544468999999999888888721 10000 0000 012322 222223
Q ss_pred CCCccEEEECCCC-----------HHHHHHHHHhcccCCEEEEEc
Q 017916 252 GTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 252 ~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g 285 (364)
.+++|+|+-.... .+.++.+.++|+++|.++.-.
T Consensus 371 ~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 371 AEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred CCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 5689998743221 245678899999999988653
No 365
>PRK09242 tropinone reductase; Provisional
Probab=94.57 E-value=0.35 Score=42.49 Aligned_cols=82 Identities=24% Similarity=0.274 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc-----CCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GADN-IVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l-----g~~~-~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
.+.++||+|+ |.+|...+..+...|+ .|+.+.++.++.+.+ .++ +... .+..+- ..++..+.+..+.+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH- 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH-
Confidence 4789999998 9999999999999999 466666666554332 222 2211 121221 123333334443332
Q ss_pred CCCccEEEECCCC
Q 017916 252 GTGIDVSFDCAGF 264 (364)
Q Consensus 252 ~~~~d~vid~~g~ 264 (364)
-+++|++|.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999874
No 366
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.56 E-value=0.58 Score=43.17 Aligned_cols=34 Identities=38% Similarity=0.550 Sum_probs=30.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
..+|+|.|+|++|..+++.+...|...+..++.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4789999999999999999999999888888764
No 367
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.56 E-value=0.5 Score=42.06 Aligned_cols=81 Identities=22% Similarity=0.225 Sum_probs=49.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
+.+|||+|+ |.+|...++.+...|+ .|+.++++.++.+.+.. ++.. ..+..+- ..+++.+.+..+... -.++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH-FGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 458999998 9999999998888898 56777777665544333 3321 1222221 123333333333322 247899
Q ss_pred EEECCCC
Q 017916 258 SFDCAGF 264 (364)
Q Consensus 258 vid~~g~ 264 (364)
+|.++|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 368
>PLN02476 O-methyltransferase
Probab=94.54 E-value=1 Score=40.11 Aligned_cols=106 Identities=22% Similarity=0.231 Sum_probs=68.1
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
.+.....+||-.|.+ +|..++.+|+.++. ..+++++.+++..+.++ +.|..+-+.+. ..+..+.+.++....
T Consensus 114 ~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li--~GdA~e~L~~l~~~~ 190 (278)
T PLN02476 114 VQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVK--HGLAAESLKSMIQNG 190 (278)
T ss_pred HHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcc
Confidence 445667899999863 36777788887642 26899999998876664 45654322221 134455555443211
Q ss_pred -CCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916 252 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 252 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 285 (364)
.+.||.||--... .+.+..+++.|++||.++.=+
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN 228 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN 228 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 2579998743332 356778899999999988644
No 369
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.51 E-value=0.68 Score=39.61 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
...+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34689999999999999999999999888888765
No 370
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.51 E-value=0.82 Score=39.78 Aligned_cols=106 Identities=21% Similarity=0.275 Sum_probs=67.0
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
.+..+..+||-.|.|. |..++.+++.++ ...+++++.+++..+.+++ .|...-+.+. ..+..+.+..+....
T Consensus 64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~~~ 140 (234)
T PLN02781 64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLNND 140 (234)
T ss_pred HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHhCC
Confidence 4456678999988633 667777887653 4489999999987776654 4543222211 134444444443211
Q ss_pred -CCCccEEEECCC---CHHHHHHHHHhcccCCEEEEEc
Q 017916 252 -GTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 252 -~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g 285 (364)
.+.||+||--.. -.+.+..+++.|++||.++.-+
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 357999984332 1456778899999999887643
No 371
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.48 Score=42.23 Aligned_cols=80 Identities=18% Similarity=0.235 Sum_probs=48.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCC---CeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGA---DNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~---~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
+.++||+|+ |.+|...+..+...|+ .|++++++.++.+.+. ..+. ...+..+- ..+++.+ +.+.... -
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence 568999998 9999999998888899 4666666665543332 2221 11222222 2233333 4444332 2
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|+++.++|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999998873
No 372
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.50 E-value=0.43 Score=41.39 Aligned_cols=82 Identities=23% Similarity=0.278 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~d 256 (364)
++.++||+|+ |.+|...+..+...|+ .|+...++.++.+.+ ..++.. ..+..+-. .+++.+.+.++.+. -+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 4679999998 9999999988888898 566665655554433 344432 12222211 22333333333222 24799
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.++|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999873
No 373
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.53 Score=41.87 Aligned_cols=80 Identities=21% Similarity=0.202 Sum_probs=49.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.++||+|+ |.+|...++.+...|. .|+++.++.++.+.+++ ++.. ..+..+- ..+++.+.+.++.+. ..++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 47999998 9999999988888898 56777777766554443 2321 1122221 122333334333322 3578999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|.++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998873
No 374
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.47 E-value=0.48 Score=36.84 Aligned_cols=95 Identities=21% Similarity=0.296 Sum_probs=55.6
Q ss_pred EEEEcC-CHHHHHHHHHHHHCC--CCEEEEEecChh--H-HHHHHHcCCCeEEecCCCcccHHHHHHHHHH---------
Q 017916 185 VLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDY--R-LSVAKELGADNIVKVSTNLQDIAEEVEKIQK--------- 249 (364)
Q Consensus 185 VLI~Ga-g~~G~~ai~la~~~g--~~~vv~~~~~~~--~-~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~--------- 249 (364)
|.|.|+ |.+|..++.+.+... + .|++...... + .+.++++.+..+...+. +..+.++....
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 578898 999999999999987 5 3455544322 2 34556788887765432 22222222211
Q ss_pred --------H-cCCCccEEEECCCCHHHHHHHHHhcccCCEEEE
Q 017916 250 --------A-MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL 283 (364)
Q Consensus 250 --------~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 283 (364)
. ...++|+++.++-+-..+.-.+..++.+-++.+
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 0 125688888876656777777777776655543
No 375
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.47 E-value=0.57 Score=38.70 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=28.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216 (364)
Q Consensus 184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~ 216 (364)
+|+|.|+|++|...++.+...|...+..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999889998888887653
No 376
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=94.46 E-value=0.4 Score=42.05 Aligned_cols=95 Identities=20% Similarity=0.204 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC----C------eEEecCCCcccHHHHHHHHHHH
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA----D------NIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~----~------~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
+..+|||.|+|. |..+-.+++....+.+.+++-+++-.+.++++-. . .++. .|-. .+.+.
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~----~~l~~ 145 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGR----KFLKE 145 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHH----HHHHT
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhH----HHHHh
Confidence 678999998655 5566677777767789999999988888876421 0 1221 2322 23333
Q ss_pred cCC-CccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017916 251 MGT-GIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 251 ~~~-~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g 285 (364)
... ++|+|| |... +.+.++.+.++|+++|.++.-.
T Consensus 146 ~~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~ 191 (246)
T PF01564_consen 146 TQEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA 191 (246)
T ss_dssp SSST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence 345 899987 5543 3578899999999999998754
No 377
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.45 E-value=0.62 Score=40.86 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~ 214 (364)
...+|+|.|+|++|..++..+...|...+..++.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3479999999999999999999999988888764
No 378
>PRK12367 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.33 Score=42.56 Aligned_cols=75 Identities=21% Similarity=0.257 Sum_probs=44.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.+.++||+|+ |++|.+.++.+...|+ .|++++++. ++.+.... +....+..+-. +. +.+.+. -+++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~--~~-~~~~~~----~~~iDil 83 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECG--KE-ESLDKQ----LASLDVL 83 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCC--CH-HHHHHh----cCCCCEE
Confidence 3679999998 9999999999888999 566666554 22221111 11122222221 11 122222 2469999
Q ss_pred EECCCC
Q 017916 259 FDCAGF 264 (364)
Q Consensus 259 id~~g~ 264 (364)
|+++|.
T Consensus 84 VnnAG~ 89 (245)
T PRK12367 84 ILNHGI 89 (245)
T ss_pred EECCcc
Confidence 999874
No 379
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.44 E-value=0.27 Score=42.40 Aligned_cols=75 Identities=23% Similarity=0.331 Sum_probs=46.1
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~ 261 (364)
+++|+|+ +.+|.+.++.+...|+ .|+.+.++.++.+.+ ++++... +..+-.++ +.++++.+.....+|++|++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~---~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDA-IVCDNTDP---ASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcE-EecCCCCH---HHHHHHHHHHhhcCcEEEEC
Confidence 5899988 9999999999988899 566677776665433 4455432 22222211 12333322222368999988
Q ss_pred CC
Q 017916 262 AG 263 (364)
Q Consensus 262 ~g 263 (364)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 380
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.44 E-value=0.36 Score=42.50 Aligned_cols=76 Identities=20% Similarity=0.216 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~ 257 (364)
+|.++||+|+ |.+|...++.+...|+ .|+.+.++..+. ++. ...+..+-. .+++.+.+..+... -+++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4789999998 9999999999888999 466666554321 111 111222221 12233333333222 347999
Q ss_pred EEECCC
Q 017916 258 SFDCAG 263 (364)
Q Consensus 258 vid~~g 263 (364)
+|+++|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999887
No 381
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.42 E-value=0.68 Score=42.71 Aligned_cols=34 Identities=35% Similarity=0.537 Sum_probs=30.1
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
+.+|+|.|+|++|..++..+...|...+..+|.+
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4689999999999999999999999888888764
No 382
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.41 E-value=0.53 Score=41.37 Aligned_cols=83 Identities=20% Similarity=0.194 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHH---cCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~---lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|...++.+...|+++++....+.++.+ ..++ .+.. ..+..+-. .+++.+.+...... .+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999998 999999998888899954444433333332 2222 2332 12222211 22333333333222 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999873
No 383
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.41 E-value=0.44 Score=41.40 Aligned_cols=81 Identities=16% Similarity=0.158 Sum_probs=46.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HH---HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCc
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VA---KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~ 255 (364)
.++||+|+ |.+|...+..+...|+++++...++.++.+ .. +..+.. ..+..+-. .+++.+.++.+.+ ..+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence 37899998 999999999888899964444445444332 22 222321 12222221 2233333443332 24579
Q ss_pred cEEEECCCC
Q 017916 256 DVSFDCAGF 264 (364)
Q Consensus 256 d~vid~~g~ 264 (364)
|++|.++|.
T Consensus 81 d~vi~~ag~ 89 (247)
T PRK09730 81 AALVNNAGI 89 (247)
T ss_pred CEEEECCCC
Confidence 999999874
No 384
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=94.40 E-value=1.2 Score=37.84 Aligned_cols=90 Identities=12% Similarity=0.154 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh-H-HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-R-LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~-~-~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.|.+|||.|+|.+|...+..+...|+ .|.+++.... . .+++.. +.-... .. .+.. ..-.++|+|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~~---~~--~~~~-------~~l~~adlV 74 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRWK---QK--EFEP-------SDIVDAFLV 74 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEEE---ec--CCCh-------hhcCCceEE
Confidence 46899999999999998888888998 4566643321 1 122222 211111 11 1110 012468999
Q ss_pred EECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916 259 FDCAGFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 259 id~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
|-|+++++. +..+......+.++...
T Consensus 75 iaaT~d~el-N~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 75 IAATNDPRV-NEQVKEDLPENALFNVI 100 (202)
T ss_pred EEcCCCHHH-HHHHHHHHHhCCcEEEC
Confidence 999996554 44433333445555543
No 385
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.38 E-value=0.4 Score=45.00 Aligned_cols=73 Identities=23% Similarity=0.328 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
-.+.+|||.|+|-+|..++..+...|...++++.++.+|.. +++++|+..+ .++ + +... -..+|+|
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvV 242 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVV 242 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEE
Confidence 46789999999999999999999999888888888887754 6788995432 221 1 2112 1468999
Q ss_pred EECCCCH
Q 017916 259 FDCAGFN 265 (364)
Q Consensus 259 id~~g~~ 265 (364)
|.+++++
T Consensus 243 issTsa~ 249 (414)
T COG0373 243 ISSTSAP 249 (414)
T ss_pred EEecCCC
Confidence 9998875
No 386
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.37 E-value=0.56 Score=40.83 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHH---HcCCCeE-EecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAK---ELGADNI-VKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~---~lg~~~~-~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ |.+|...++.+...|+++++....+. .+.+.++ ..+.... +..+- ..+++.+.+.+..+. .+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-VG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 3568899998 99999999999999996444343333 2223333 3343321 11221 122333333333332 25
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 387
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.31 E-value=0.62 Score=40.87 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.+|||+|+ +.+|...+..+...|++ ++.++++.++.+.+ +..+.. ..+..|-. .++..+.++.+.+. -+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-LG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 4789999998 99999999988889995 55565655544322 222322 12222221 12333333333322 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 388
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.29 E-value=0.64 Score=41.07 Aligned_cols=82 Identities=26% Similarity=0.287 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ +.+|.+.+..+...|++ ++.+.+++++.+. ++..+.. ..+..|-. .++..+.+..+... -+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-VG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence 5678999998 99999988888889995 5666666655432 2233432 12222222 12223333333222 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.++|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 389
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=94.28 E-value=1.2 Score=42.49 Aligned_cols=107 Identities=20% Similarity=0.230 Sum_probs=65.1
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHH
Q 017916 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEV 244 (364)
Q Consensus 170 a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i 244 (364)
+...+....+++|++||=.|+|. |..+..+++..+...|++++.++++.+.++ .+|... ++..+. .+ +
T Consensus 233 s~~~~~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~--~~----~ 305 (427)
T PRK10901 233 AQLAATLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA--RD----P 305 (427)
T ss_pred HHHHHHHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc--cc----c
Confidence 33334556778999999887644 445556666654347999999998876654 345432 222111 11 1
Q ss_pred HHHHHHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916 245 EKIQKAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 245 ~~~~~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g 285 (364)
..+. ....+|.|+ | |.+.+ ..+..+++.|+|||+++...
T Consensus 306 ~~~~--~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst 372 (427)
T PRK10901 306 AQWW--DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT 372 (427)
T ss_pred hhhc--ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 1111 134699987 3 33321 36778888999999998664
No 390
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.28 E-value=0.52 Score=41.63 Aligned_cols=82 Identities=21% Similarity=0.312 Sum_probs=47.6
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecC---hhHHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVD---DYRLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~---~~~~~-~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
.+.++||+|+ +++|.+.++.+...|++ |+.+... .++.+ +.++++....+..|- ..++..+.+..+....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW- 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh-
Confidence 4689999984 58999998888889995 4444322 23322 234445322222222 2234444444443322
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|++|+++|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 579999998763
No 391
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.6 Score=41.09 Aligned_cols=79 Identities=27% Similarity=0.344 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCC-eEEecCCCcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ +++|...++.+...|+ .|+.++++.++.+.+ +++ +.. ..+..+-. + .+.++.+.... +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLS--S-PEAREQLAAEA-G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC--C-HHHHHHHHHHh-C
Confidence 4689999998 9999999998888999 677777766554332 222 221 22222221 1 22233333322 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 392
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.63 Score=42.29 Aligned_cols=81 Identities=19% Similarity=0.240 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh----------hHH----HHHHHcCCC-eEEecCC-CcccHHHH
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----------YRL----SVAKELGAD-NIVKVST-NLQDIAEE 243 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~----------~~~----~~~~~lg~~-~~~~~~~-~~~~~~~~ 243 (364)
.+.++||+|+ +++|.++++.+...|++ |+.+.++. ++. +.++..+.. ..+..|- ..++..+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGAT-VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4679999998 89999999999999994 55555542 222 222333432 1222221 22333334
Q ss_pred HHHHHHHcCCCccEEEECC-C
Q 017916 244 VEKIQKAMGTGIDVSFDCA-G 263 (364)
Q Consensus 244 i~~~~~~~~~~~d~vid~~-g 263 (364)
+..+.+. -+++|++|+++ |
T Consensus 86 ~~~~~~~-~g~iDilVnnA~g 105 (305)
T PRK08303 86 VERIDRE-QGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHH-cCCccEEEECCcc
Confidence 4433332 24799999988 5
No 393
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.25 E-value=1 Score=38.18 Aligned_cols=34 Identities=26% Similarity=0.490 Sum_probs=29.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
..+|+|.|+|++|...++.+.+.|...+..+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4789999999999999999999999878888765
No 394
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=94.22 E-value=0.77 Score=42.66 Aligned_cols=103 Identities=30% Similarity=0.412 Sum_probs=64.1
Q ss_pred HHcCCCCCCEEEEE-cC-CHHHHHHHHHHHHC---CCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHH
Q 017916 175 RRANIGPETNVLIM-GA-GPIGLVTMLGARAF---GAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVE 245 (364)
Q Consensus 175 ~~~~~~~g~~VLI~-Ga-g~~G~~ai~la~~~---g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~ 245 (364)
...+.++|++||=. .| |+ =+.++|..+ |. .|++.+.+++|...+ +.+|+..+.........+.+
T Consensus 150 ~~L~p~pge~VlD~cAAPGG---KTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~--- 222 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGG---KTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAE--- 222 (355)
T ss_pred HHcCCCCcCEEEEECCCCCC---HHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEecccccccc---
Confidence 56888999999987 44 54 334455444 44 579999999887654 56898853332221111111
Q ss_pred HHHHHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916 246 KIQKAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 246 ~~~~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~ 286 (364)
.+. .+..||.|+ | |+|++ +.+..+++.|++||+++..-.
T Consensus 223 ~~~--~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYSTC 289 (355)
T COG0144 223 LLP--GGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTC 289 (355)
T ss_pred ccc--ccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 110 022488876 5 66643 477788999999999987653
No 395
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.21 E-value=0.65 Score=40.15 Aligned_cols=103 Identities=20% Similarity=0.282 Sum_probs=64.9
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
....++++++||-.|+|. |..+..+++..+. ..+++++.+++..+.+++ .+.+.+..... +.. .+.
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~----~~~- 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAM----ELP- 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chh----cCC-
Confidence 456778899999998754 5677788877643 379999999887766653 23322111111 110 010
Q ss_pred HcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916 250 AMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 250 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
.....+|+|+-+.. -...+.++.+.|+++|+++....
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 01357899875322 13466788999999999987653
No 396
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.21 E-value=0.65 Score=41.33 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=46.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-H---HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-A---KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~---~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
..++||+|+ |.+|...++.+...|+ .|+++.++.++... . +..+... .+..+- ..+++.+.++..... -++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence 458999998 9999999998888899 56666565544322 2 2223321 112222 122333333333222 246
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 397
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.20 E-value=0.62 Score=40.53 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
.+.+|||+|+ |.+|...+..+...|+ .|++++++.++... ++..+.. ..+..+- ...++.+.+..+... -.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-FG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 4578999998 9999999988888899 56777666544322 2222321 1222221 122333333333222 23
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998753
No 398
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=94.18 E-value=0.4 Score=34.46 Aligned_cols=84 Identities=15% Similarity=0.258 Sum_probs=53.4
Q ss_pred EcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe---EEecCCCcccHHHHHHHHHHHcCCCccEEEECCC-
Q 017916 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG- 263 (364)
Q Consensus 188 ~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g- 263 (364)
.|.| .|..+..+++. +...+++++.+.+..+.+++..... +..-+...-.+ ..+.+|+|+....
T Consensus 3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~----------~~~sfD~v~~~~~~ 70 (95)
T PF08241_consen 3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPF----------PDNSFDVVFSNSVL 70 (95)
T ss_dssp ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-----------TT-EEEEEEESHG
T ss_pred ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCcc----------ccccccccccccce
Confidence 3544 47888888888 5558999999999888887754332 22211111111 1357899986422
Q ss_pred -----CHHHHHHHHHhcccCCEEEE
Q 017916 264 -----FNKTMSTALSATRAGGKVCL 283 (364)
Q Consensus 264 -----~~~~~~~~~~~l~~~G~~v~ 283 (364)
-...+.++.+.|+|+|+++.
T Consensus 71 ~~~~~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 71 HHLEDPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp GGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeccCHHHHHHHHHHHcCcCeEEeC
Confidence 13677899999999999874
No 399
>PRK11761 cysM cysteine synthase B; Provisional
Probab=94.16 E-value=2 Score=38.79 Aligned_cols=57 Identities=21% Similarity=0.307 Sum_probs=44.6
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEE
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIV 231 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~ 231 (364)
+...+.+|++|+...+|..|++++..|+.+|.+.++++.. +++|.+.++.+|++-+.
T Consensus 56 ~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 114 (296)
T PRK11761 56 KRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELIL 114 (296)
T ss_pred HcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence 4455678888777666999999999999999987777743 55788888999987543
No 400
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.16 E-value=0.47 Score=41.11 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
+..+|||+|+ |.+|...++.+...|+++++.+.+..+..+.+. ..+.. ..+..+- ..+++.+.+..+... -.
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~ 83 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER-FG 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH-cC
Confidence 3468999998 999999999999999965444544444333221 22322 1222222 123333333333322 24
Q ss_pred CccEEEECCC
Q 017916 254 GIDVSFDCAG 263 (364)
Q Consensus 254 ~~d~vid~~g 263 (364)
++|.+|.++|
T Consensus 84 ~id~vi~~ag 93 (249)
T PRK12825 84 RIDILVNNAG 93 (249)
T ss_pred CCCEEEECCc
Confidence 7999999887
No 401
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.15 E-value=0.59 Score=42.08 Aligned_cols=93 Identities=23% Similarity=0.249 Sum_probs=57.1
Q ss_pred CEEEEEcCCHHHHH-HHHHHHHCCCCEEEEEecChh--HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH-cCCCccEE
Q 017916 183 TNVLIMGAGPIGLV-TMLGARAFGAPRIVIVDVDDY--RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA-MGTGIDVS 258 (364)
Q Consensus 183 ~~VLI~Gag~~G~~-ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~d~v 258 (364)
-+|.|.|.|.+|.. +..+.+.-+.+.+.+++.+.+ .....+++|..... .++ +.+... .-.++|+|
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~i----e~LL~~~~~~dIDiV 74 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGI----DGLLAMPEFDDIDIV 74 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCH----HHHHhCcCCCCCCEE
Confidence 47899999999986 445555456655555555543 34567778865321 122 222220 01469999
Q ss_pred EECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916 259 FDCAGFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 259 id~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
|++++...+......++..|-+++...
T Consensus 75 f~AT~a~~H~e~a~~a~eaGk~VID~s 101 (302)
T PRK08300 75 FDATSAGAHVRHAAKLREAGIRAIDLT 101 (302)
T ss_pred EECCCHHHHHHHHHHHHHcCCeEEECC
Confidence 999997777666666666665555543
No 402
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.14 E-value=0.83 Score=38.98 Aligned_cols=98 Identities=14% Similarity=0.225 Sum_probs=56.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
++++++||=.|+|. |..+..+++..+. ..|++++.++.. ..-++ .++.-+-......+.+.... ..+.+|+
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~--~~~~~D~ 120 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERV--GDSKVQV 120 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHh--CCCCCCE
Confidence 58899988888754 5556666666653 379999887621 01122 22221211112122222211 2457999
Q ss_pred EEECC-----CC------------HHHHHHHHHhcccCCEEEEE
Q 017916 258 SFDCA-----GF------------NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 258 vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~ 284 (364)
|+... |. ...++.+.+.|++||+++..
T Consensus 121 V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~ 164 (209)
T PRK11188 121 VMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK 164 (209)
T ss_pred EecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 99643 22 13567889999999999874
No 403
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.14 E-value=0.79 Score=40.17 Aligned_cols=82 Identities=13% Similarity=0.257 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-H---HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-A---KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~---~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
++.++||+|+ +.+|...+..+...|+ .|+.++++.++.+. . ++.+.. ..+..+- ..+++.+.++...... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-G 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-C
Confidence 5789999998 9999999998888899 56777776554332 2 233422 1222221 2233333333333322 4
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|.+|.++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 404
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.13 E-value=0.46 Score=41.20 Aligned_cols=82 Identities=21% Similarity=0.361 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|...+..+...|+ .|+.+++++++.+.. .+ .+... .+..+-. ..++.+.++.+... -+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE-LG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 3578999998 9999999998888999 577777766554322 22 23211 2222221 22333333333221 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998873
No 405
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.10 E-value=0.26 Score=47.76 Aligned_cols=78 Identities=22% Similarity=0.314 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh---------------------hHHHHHHHcCCCeEEecCCCcc
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---------------------YRLSVAKELGADNIVKVSTNLQ 238 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~ 238 (364)
..+++|+|.|+|+.|+.++..++..|.+ |++.+..+ ...+.++++|++...+..- ..
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~ 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GR 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CC
Confidence 3678999999999999999999999995 56665443 2456677888764433111 01
Q ss_pred cHHHHHHHHHHHcCCCccEEEECCCCH
Q 017916 239 DIAEEVEKIQKAMGTGIDVSFDCAGFN 265 (364)
Q Consensus 239 ~~~~~i~~~~~~~~~~~d~vid~~g~~ 265 (364)
++ .+.... .++|.+|.++|+.
T Consensus 217 ~~--~~~~~~----~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL----EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH----hcCCEEEEEeCCC
Confidence 11 112221 3699999999964
No 406
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.10 E-value=0.74 Score=40.37 Aligned_cols=81 Identities=26% Similarity=0.326 Sum_probs=48.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC--eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~~d 256 (364)
+.++||+|+ |.+|...+..+...|+ .++.++++.++.+ +.+.+.-. ..+..+-. .+++...+..+.... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER-GPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 468999998 9999999988888898 5677777666544 33333211 12222221 123333333333322 4699
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 407
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.08 E-value=0.67 Score=40.46 Aligned_cols=79 Identities=25% Similarity=0.373 Sum_probs=48.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 255 (364)
.++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+.. .+.. ..+..+- ..+++.+.++.+.+. -.++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCCC
Confidence 57999998 9999999998888899 57777776655443322 2222 1122221 123344434444332 2468
Q ss_pred cEEEECCC
Q 017916 256 DVSFDCAG 263 (364)
Q Consensus 256 d~vid~~g 263 (364)
|++|.+.+
T Consensus 80 d~vi~~a~ 87 (255)
T TIGR01963 80 DILVNNAG 87 (255)
T ss_pred CEEEECCC
Confidence 99998776
No 408
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.05 E-value=0.76 Score=41.15 Aligned_cols=89 Identities=24% Similarity=0.292 Sum_probs=57.6
Q ss_pred EEEEEcCCHHHHHH-HHHHHHCCCCEEEEEecChhH--HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 184 NVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 184 ~VLI~Gag~~G~~a-i~la~~~g~~~vv~~~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
+|.|.|+|.+|... ..+.+..+.+.+.+++.++++ ....+++|...... ++. .+.. ...+|+||+
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e----~ll~--~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVD----GLLA--NPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHH----HHhc--CCCCCEEEE
Confidence 68889999999754 566665677555555555543 45677788654321 212 1221 247999999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEE
Q 017916 261 CAGFNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~ 284 (364)
+++...+......++..|-+++..
T Consensus 71 aTp~~~H~e~a~~al~aGk~VIde 94 (285)
T TIGR03215 71 ATSAKAHARHARLLAELGKIVIDL 94 (285)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEEC
Confidence 999888877777777765555443
No 409
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.03 E-value=1.2 Score=37.76 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
-.|.+|+|.|.|.+|..+++.+...|+ .|++.+.+.++.+.+. .+++.. ++. ++ +. ...+|++
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~----~~-------l~---~~~~Dv~ 89 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAP----EE-------IY---SVDADVF 89 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecc----hh-------hc---cccCCEE
Confidence 357899999999999999999999999 5678888777665544 446432 221 11 11 2368999
Q ss_pred EECCCCHHHHHHHHHhcc
Q 017916 259 FDCAGFNKTMSTALSATR 276 (364)
Q Consensus 259 id~~g~~~~~~~~~~~l~ 276 (364)
+-|+.....-...++.|+
T Consensus 90 vp~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 90 APCALGGVINDDTIPQLK 107 (200)
T ss_pred EecccccccCHHHHHHcC
Confidence 866543333344556664
No 410
>PRK06484 short chain dehydrogenase; Validated
Probab=94.03 E-value=0.44 Score=46.75 Aligned_cols=82 Identities=28% Similarity=0.377 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
.+.++||+|+ +++|.+.++.+...|+ .|+.+.++.++.+ +.++++... .+..|- ..+++.+.++.+.+. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence 5789999998 9999999999999999 5677767666654 445565432 122221 223344444443332 24799
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998873
No 411
>PTZ00146 fibrillarin; Provisional
Probab=94.01 E-value=0.81 Score=40.95 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=61.7
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHH-HHHHH----cCCCeEEecCCCcccHHHHHHH
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRL-SVAKE----LGADNIVKVSTNLQDIAEEVEK 246 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~-~~~~~----lg~~~~~~~~~~~~~~~~~i~~ 246 (364)
.++...++++++||=.|+|. |..+..++...|. ..|++++.+++-. ++++. -++.. +.-+.. . ....+.
T Consensus 124 g~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~-I~~Da~--~-p~~y~~ 198 (293)
T PTZ00146 124 GVANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVP-IIEDAR--Y-PQKYRM 198 (293)
T ss_pred CcceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEE-EECCcc--C-hhhhhc
Confidence 35667889999999888755 6677888888763 3799998875432 22222 12222 211111 1 111111
Q ss_pred HHHHcCCCccEEEECCCCHH----HHHHHHHhcccCCEEEEE
Q 017916 247 IQKAMGTGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV 284 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~ 284 (364)
. ...+|+||-.+..++ ...++.+.|+++|+++..
T Consensus 199 ~----~~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI~ 236 (293)
T PTZ00146 199 L----VPMVDVIFADVAQPDQARIVALNAQYFLKNGGHFIIS 236 (293)
T ss_pred c----cCCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEEE
Confidence 1 236899986554443 234567799999999873
No 412
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.98 E-value=0.52 Score=44.57 Aligned_cols=76 Identities=13% Similarity=0.251 Sum_probs=45.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
.+.+++|+|+ |.+|.+.++.+...|+ .|+++++++++.+. ....+.. ..+..+-. + .+.+.+. -+++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d-~~~v~~~----l~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--Q-EAALAEL----LEKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--C-HHHHHHH----hCCCCE
Confidence 4789999998 9999999998888999 56666666554432 2111111 12222211 1 1223322 147999
Q ss_pred EEECCCC
Q 017916 258 SFDCAGF 264 (364)
Q Consensus 258 vid~~g~ 264 (364)
+|+++|.
T Consensus 249 LInnAGi 255 (406)
T PRK07424 249 LIINHGI 255 (406)
T ss_pred EEECCCc
Confidence 9998763
No 413
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.97 E-value=0.87 Score=41.93 Aligned_cols=90 Identities=21% Similarity=0.261 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|.|.|.|.+|...++.++.+|+ .|++.+++.... .....+.. + .++. ++. ...|+|+-
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~----~----~~l~----ell----~~aDiV~l 210 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAE----Y----RPLE----ELL----RESDFVSL 210 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCE----e----cCHH----HHH----hhCCEEEE
Confidence 57899999999999999999999999 577887665432 23334432 1 1222 222 24689888
Q ss_pred CCCCHH----HH-HHHHHhcccCCEEEEEcCCC
Q 017916 261 CAGFNK----TM-STALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~ 288 (364)
++...+ .+ ...+..|+++..++.++...
T Consensus 211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~ 243 (333)
T PRK13243 211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK 243 (333)
T ss_pred eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence 765322 11 25678899999888886543
No 414
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=93.95 E-value=0.67 Score=40.32 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHH---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|...+..+...|+++++...+++++.+ ... ..+.. ..+..+-. .+++.+.++..... -+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH-FG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 3679999998 999999999888899964433333333322 222 22322 12222222 22333333333322 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
.+|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (247)
T PRK12935 84 KVDILVNNAGI 94 (247)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 415
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.94 E-value=0.79 Score=42.61 Aligned_cols=35 Identities=31% Similarity=0.484 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
.+.+|||.|+|++|..++..+...|...+..++.+
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34799999999999999999999999988888753
No 416
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.94 E-value=0.62 Score=40.60 Aligned_cols=80 Identities=26% Similarity=0.212 Sum_probs=45.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 255 (364)
.++||+|+ |.+|...++.....|+++++...++.++.+. ++..+.. ..+..+- ...++.+.++.+... -+++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCCC
Confidence 47999998 9999999999988899644444444443322 2222322 1222222 122333333333322 2479
Q ss_pred cEEEECCC
Q 017916 256 DVSFDCAG 263 (364)
Q Consensus 256 d~vid~~g 263 (364)
|++|.++|
T Consensus 82 d~li~~ag 89 (248)
T PRK06947 82 DALVNNAG 89 (248)
T ss_pred CEEEECCc
Confidence 99999887
No 417
>PRK07577 short chain dehydrogenase; Provisional
Probab=93.92 E-value=0.41 Score=41.26 Aligned_cols=74 Identities=18% Similarity=0.331 Sum_probs=45.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEEE
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
+.++||+|+ |.+|...++.+...|+ .|+.+.++.++ .+.. .++..+- ..+++.+.+..+.. ..++|++|
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~vi 73 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAIV 73 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEEE
Confidence 578999998 9999999999988998 56666665443 1111 1222221 12333344444433 23689999
Q ss_pred ECCCC
Q 017916 260 DCAGF 264 (364)
Q Consensus 260 d~~g~ 264 (364)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98873
No 418
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.92 E-value=0.66 Score=40.86 Aligned_cols=82 Identities=23% Similarity=0.211 Sum_probs=46.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHH-H---HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLS-V---AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~-~---~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 252 (364)
++.++||+|+ +.+|...++.+...|+.+ +.+.+ +.++.+ . ++..+... .+..+- ..++..+.+..+... .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~v-vi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKV-VINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE-F 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence 5789999998 999999999999999954 44434 322222 2 22233321 222221 122333333333222 2
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|+++.++|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 479999998874
No 419
>PRK06101 short chain dehydrogenase; Provisional
Probab=93.90 E-value=0.61 Score=40.54 Aligned_cols=41 Identities=27% Similarity=0.272 Sum_probs=32.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE 224 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~ 224 (364)
.++||+|+ |++|...+..+...|+ .|+.+++++++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence 46899998 9999988888888899 57777777777655544
No 420
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.88 E-value=0.53 Score=42.35 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~ 216 (364)
.+.++||.|+|+.+.+++..+...|++.+.++.++.
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999988888877777778998888888874
No 421
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.88 E-value=0.32 Score=43.32 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=41.2
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC
Q 017916 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG 226 (364)
Q Consensus 173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg 226 (364)
+++......+.+++|.|+|+.+.+++.-++..|++.+.++.++.+|.+.+ +.++
T Consensus 113 ~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~ 167 (272)
T PRK12550 113 LLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG 167 (272)
T ss_pred HHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC
Confidence 34443445567999999999999999999999998888988888776544 4443
No 422
>PRK09135 pteridine reductase; Provisional
Probab=93.86 E-value=0.77 Score=39.88 Aligned_cols=81 Identities=19% Similarity=0.117 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHHHHH-H---HcCC--CeEEecCCC-cccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVA-K---ELGA--DNIVKVSTN-LQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~~~~-~---~lg~--~~~~~~~~~-~~~~~~~i~~~~~~~ 251 (364)
.+.+|||+|+ |.+|..++..+...|+ .|++++++ .++.+.+ + ..+. ...+..+-. .+++.+.++.+...
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA- 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 4578999998 9999999998888899 46666554 3332222 1 2211 112222211 12223333332221
Q ss_pred CCCccEEEECCC
Q 017916 252 GTGIDVSFDCAG 263 (364)
Q Consensus 252 ~~~~d~vid~~g 263 (364)
-.++|++|.++|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 246899999987
No 423
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.86 E-value=0.79 Score=39.71 Aligned_cols=83 Identities=19% Similarity=0.255 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH-HH---HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SV---AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~---~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |.+|...+..+...|+++++...+.+.+. .. ++..+... .+..+-. .+++.+.++.+.+. -.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-FG 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 3568999998 99999999999989996444443333222 22 22223221 2211221 12233333333221 24
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|.+|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (248)
T PRK05557 83 GVDILVNNAGI 93 (248)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 424
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.85 E-value=0.77 Score=40.69 Aligned_cols=79 Identities=24% Similarity=0.305 Sum_probs=46.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d 256 (364)
+|||+|+ |.+|...+..+...|++ |+.++++.++.+. .. ..+... .+..+-. .+++.+.++.+.. ..+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 6899998 99999999888888994 6666666655332 22 223222 2222221 1223333333222 235799
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.++|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999874
No 425
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.85 E-value=0.56 Score=40.88 Aligned_cols=84 Identities=20% Similarity=0.317 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe--EE--ecCC-CcccHHHHHHHHH
Q 017916 179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN--IV--KVST-NLQDIAEEVEKIQ 248 (364)
Q Consensus 179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~--~~--~~~~-~~~~~~~~i~~~~ 248 (364)
..++.+|||+|+ |.+|...++.+...|+ .|++++++.++.+. +++.+... ++ +.+. ...++.+..+.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999998 9999999988888899 56677776654322 22333221 22 2221 2233333334343
Q ss_pred HHcCCCccEEEECCCC
Q 017916 249 KAMGTGIDVSFDCAGF 264 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~ 264 (364)
+. .+++|.+|.++|.
T Consensus 88 ~~-~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQ-FGRLDGVLHNAGL 102 (247)
T ss_pred HH-hCCCCEEEECCcc
Confidence 32 2479999988763
No 426
>PRK08328 hypothetical protein; Provisional
Probab=93.84 E-value=0.85 Score=39.62 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~ 214 (364)
.+.+|+|.|+|++|..++..+...|...+..+|.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3478999999999999999999999998888863
No 427
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.83 E-value=0.5 Score=40.09 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
++.+||-.|+|. |..+..+++......+++++.+++..+.+++ .+...+.... .+..+.+... .....+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence 678888888765 6777788887654579999999988777654 2333222111 2221222111 1135688
Q ss_pred EEEECCC--------------CHHHHHHHHHhcccCCEEEEE
Q 017916 257 VSFDCAG--------------FNKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 257 ~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~ 284 (364)
.++-... ....++.+.+.|+|+|.++..
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~ 155 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA 155 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence 8875322 245788999999999999876
No 428
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.83 E-value=0.68 Score=42.23 Aligned_cols=81 Identities=23% Similarity=0.357 Sum_probs=48.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCC-CCEEEEEecChhHHH-HHHHcCCC----eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLS-VAKELGAD----NIVKVST-NLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~~~-~~~~lg~~----~~~~~~~-~~~~~~~~i~~~~~~~~~ 253 (364)
+.++||+|+ +++|.+.++.+...| + .|+.+.++.++.+ ..++++.. ..+..+- ...+..+.+.++... .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES-GR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence 568999998 999999888888889 7 5666666665543 33444321 1222221 122333333333222 35
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|+++|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998773
No 429
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.82 E-value=0.47 Score=41.10 Aligned_cols=80 Identities=23% Similarity=0.253 Sum_probs=45.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHH-HHHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRL-SVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~-~~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
.++||+|+ |.+|...++.+...|++ ++++.+ +.++. +...++ +.. ..+..+- ...++.+.+..+.+. .++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR-VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE-LGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-cCC
Confidence 36899998 99999999999889995 555544 33332 222222 211 1222222 123333334333332 346
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 9999999873
No 430
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=93.80 E-value=1.5 Score=38.91 Aligned_cols=35 Identities=20% Similarity=0.424 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
.+.+|+|.|.|++|..++..+...|...+..++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999998888888743
No 431
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.80 E-value=0.32 Score=49.07 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh---------------------HHHHHHHcCCCeEEecCCCccc
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY---------------------RLSVAKELGADNIVKVSTNLQD 239 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~ 239 (364)
.+.+|+|.|+|..|+.++..++..|++ |.+.+..+. +.++++++|++...+..- ..+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence 489999999999999999999999995 666665442 456677788765443211 111
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCH
Q 017916 240 IAEEVEKIQKAMGTGIDVSFDCAGFN 265 (364)
Q Consensus 240 ~~~~i~~~~~~~~~~~d~vid~~g~~ 265 (364)
. .++.+ ..++|.+|.++|+.
T Consensus 387 ~--~~~~l----~~~~DaV~latGa~ 406 (639)
T PRK12809 387 I--TFSDL----TSEYDAVFIGVGTY 406 (639)
T ss_pred C--CHHHH----HhcCCEEEEeCCCC
Confidence 1 12222 24689999999863
No 432
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.67 Score=40.72 Aligned_cols=83 Identities=18% Similarity=0.171 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC---hhHH-HHH---HHcCCCe-EEecCCC-cccHHHHHHHHHHH
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD---DYRL-SVA---KELGADN-IVKVSTN-LQDIAEEVEKIQKA 250 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~---~~~~-~~~---~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~ 250 (364)
.+.++||+|+ |.+|.+.++.+...|+++++....+ .++. +.. +..+... .+..|-. .++..+.+......
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 4678999998 9999999999988999644443222 1111 222 2234321 2222221 22333333333222
Q ss_pred cCCCccEEEECCCC
Q 017916 251 MGTGIDVSFDCAGF 264 (364)
Q Consensus 251 ~~~~~d~vid~~g~ 264 (364)
.+++|++|.++|.
T Consensus 87 -~~~id~li~~ag~ 99 (257)
T PRK12744 87 -FGRPDIAINTVGK 99 (257)
T ss_pred -hCCCCEEEECCcc
Confidence 2479999998874
No 433
>PRK07340 ornithine cyclodeaminase; Validated
Probab=93.79 E-value=0.88 Score=41.32 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=64.9
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHH-HCCCCEEEEEecChhHHH-HHHHcCCC--eEEecCCCcccHHHHHHHHHH
Q 017916 174 CRRANIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~-~~g~~~vv~~~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~i~~~~~ 249 (364)
.+...-....+++|.|+|..|.+.+..+. ..+.+.+.+.+++.++.+ ++.++... .+. + .+..+.+
T Consensus 117 ~~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av----- 186 (304)
T PRK07340 117 ARTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP----- 186 (304)
T ss_pred HHHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----
Confidence 34433356679999999999988888776 478888899988887755 44445321 111 1 1222221
Q ss_pred HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
.+.|+|+.|+.+.+.+-.. .++||-++..+|...
T Consensus 187 ---~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 187 ---EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFT 220 (304)
T ss_pred ---hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCC
Confidence 3789999998875533333 378888888888543
No 434
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.78 E-value=0.79 Score=38.14 Aligned_cols=80 Identities=25% Similarity=0.444 Sum_probs=52.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCC--Ce-EEecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGA--DN-IVKVS-TNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~--~~-~~~~~-~~~~~~~~~i~~~~~~~~~~~d 256 (364)
...+|+|+ +++|.+..|.....|+ ++++.+.+. +..+.++.|+. ++ .+..+ +...+....+++..+..+ .++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g-~ps 92 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG-TPS 92 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC-CCc
Confidence 34577787 8999999999999999 566666544 44566777875 22 11111 122344444555555445 899
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++++|+|.
T Consensus 93 vlVncAGI 100 (256)
T KOG1200|consen 93 VLVNCAGI 100 (256)
T ss_pred EEEEcCcc
Confidence 99999985
No 435
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.77 E-value=1 Score=40.14 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
...+.+++|.|+|++|.+++..+...|+ .+.++.++.++.+ +.+.+.... .... ++.+ . ....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~~----~---~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMDE----L---PLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chhh----h---cccCcc
Confidence 3457899999999999999888888898 6777777776644 344443210 1111 0110 1 124689
Q ss_pred EEEECCCCHH--HH---HHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEE
Q 017916 257 VSFDCAGFNK--TM---STALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 306 (364)
Q Consensus 257 ~vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 306 (364)
++|+|++.+. .. ......++++..++++....... ..+..+-.+++.+.
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-~ll~~A~~~G~~~v 234 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-PFLAEAKSLGTKTI 234 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-HHHHHHHHCCCeee
Confidence 9999988531 01 11234577777777765433322 23333444555443
No 436
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.75 E-value=1.3 Score=34.35 Aligned_cols=92 Identities=21% Similarity=0.208 Sum_probs=52.6
Q ss_pred EEEEEcC-CHHHHHHHHHHHH-CCCCEEEEEecChh---HHHHHHHcCCCe--EEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 184 NVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDY---RLSVAKELGADN--IVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~-~g~~~vv~~~~~~~---~~~~~~~lg~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
+|.|+|+ |-+|.+.++.+.. -+.+.+.++++.+. ..+.-.-.|... +..+ .+ +.+.. ..+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~~----~~~D 69 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEELL----EEAD 69 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHHT----TH-S
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHhc----ccCC
Confidence 6899999 9999999999987 67765666665541 122222222211 1111 12 33332 2389
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
++||++. ++.....++.+...|.-+..|.++
T Consensus 70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp EEEEES--HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCC
Confidence 9999886 666666666555567666666544
No 437
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.74 E-value=0.5 Score=42.56 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=31.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~ 216 (364)
-.+.+++|+|+|++|.+++..+...|++.|.++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3567899999999999988888889998788887764
No 438
>KOG3201 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.70 E-value=0.3 Score=39.17 Aligned_cols=154 Identities=16% Similarity=0.173 Sum_probs=88.1
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCC---cccHHHHH
Q 017916 169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTN---LQDIAEEV 244 (364)
Q Consensus 169 ~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~---~~~~~~~i 244 (364)
.||..|+..+.-.|.+||-.|+|-+|++-+.+|...-.+.|..++.+.+..+.+++.-..+ ...+.+- .-.+....
T Consensus 17 la~~~l~~~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlrw~~~~aq 96 (201)
T KOG3201|consen 17 LAWTILRDPNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLRWLIWGAQ 96 (201)
T ss_pred HHHHHHhchhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhHHHHhhhH
Confidence 3666676655556788999999999999999999888778999999888777766532111 0001000 00111111
Q ss_pred HHHHHHcCCCccEEE--ECCCCH----HHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccCC-CcHH
Q 017916 245 EKIQKAMGTGIDVSF--DCAGFN----KTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRYK-NTWP 316 (364)
Q Consensus 245 ~~~~~~~~~~~d~vi--d~~g~~----~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 316 (364)
. ...+..||+|+ ||.--. +.+...+.+|+|.|+.+.++...+. ...+.......++++.-.-.+. ..++
T Consensus 97 s---q~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fsPRRg~sL~kF~de~~~~gf~v~l~enyde~iwq 173 (201)
T KOG3201|consen 97 S---QQEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFSPRRGQSLQKFLDEVGTVGFTVCLEENYDEAIWQ 173 (201)
T ss_pred H---HHhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEecCcccchHHHHHHHHHhceeEEEecccHhHHHHH
Confidence 1 11245799987 565533 3555677789999998777643322 2333333444444444333332 2333
Q ss_pred HHHHHHHcC
Q 017916 317 LCLELLRSG 325 (364)
Q Consensus 317 ~~~~~l~~g 325 (364)
.-.++..++
T Consensus 174 rh~~Lkk~~ 182 (201)
T KOG3201|consen 174 RHGRLKKGD 182 (201)
T ss_pred HHHHHhcCC
Confidence 334443333
No 439
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=93.61 E-value=3.1 Score=35.76 Aligned_cols=92 Identities=14% Similarity=0.053 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 259 (364)
++.+|||.|+|.++.-=+..+...|++ |.+++..- .....+.+-+-...+. .++.. .. -.++++||
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~~-----r~~~~--~d-----l~g~~LVi 90 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLIK-----GNYDK--EF-----IKDKHLIV 90 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEEe-----CCCCh--HH-----hCCCcEEE
Confidence 577999999999998878888888994 55553322 1221122223222221 11111 11 14789999
Q ss_pred ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916 260 DCAGFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
-|++.++.=.......+..+.++...
T Consensus 91 aATdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 91 IATDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred ECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 99997655445555555557666554
No 440
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.59 E-value=0.52 Score=41.59 Aligned_cols=104 Identities=19% Similarity=0.246 Sum_probs=58.5
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh---hHHHHHHHc----CCCeEEecCC-CcccHHHHHHHHHH
Q 017916 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKEL----GADNIVKVST-NLQDIAEEVEKIQK 249 (364)
Q Consensus 181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~~~~~l----g~~~~~~~~~-~~~~~~~~i~~~~~ 249 (364)
.|.++||+|+ +++|.+.+..+...|++ |+.+..+. ...+.++++ +....+..|- ..++..+.++...+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4678999986 48999999999889995 44442221 112222222 2111222221 22333434444433
Q ss_pred HcCCCccEEEECCCCH--------------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916 250 AMGTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 250 ~~~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 286 (364)
. -+++|++|+++|.. + ..+.++..|+.+|+++.++.
T Consensus 84 ~-~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS 148 (258)
T PRK07370 84 K-WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTY 148 (258)
T ss_pred H-cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 2 24799999988731 0 12345666767788887753
No 441
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=93.55 E-value=1.3 Score=38.25 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=28.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~ 213 (364)
..+|+|.|+|++|..++..+...|...+..+|
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD 52 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVD 52 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence 57999999999999999999999998888875
No 442
>PRK05855 short chain dehydrogenase; Validated
Probab=93.52 E-value=0.72 Score=45.76 Aligned_cols=82 Identities=23% Similarity=0.264 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
.+.++||+|+ |++|.+.++.+...|++ |+.++++.++.+.+ +..|.. ..+..|-. .++..+.+..+.+ ..+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hcC
Confidence 4578999998 99999999988889995 67777776554432 223332 12222221 2233333333322 234
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 79999999874
No 443
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.51 E-value=0.76 Score=41.72 Aligned_cols=81 Identities=25% Similarity=0.338 Sum_probs=46.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHH-HH---HHHcCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRL-SV---AKELGADN-IVKVSTNL-QDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~-~~---~~~lg~~~-~~~~~~~~-~~~~~~i~~~~~~~~ 252 (364)
.+.++||+|+ +.+|.+.++.+...|++ |+.++.. .++. +. ++..|... .+..+-.+ ++..+.+..... -
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~-Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGAT-VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence 4678999998 99999999888889995 5555443 2222 22 22334322 12222111 222222222222 3
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|++|+++|.
T Consensus 88 g~iD~li~nAG~ 99 (306)
T PRK07792 88 GGLDIVVNNAGI 99 (306)
T ss_pred CCCCEEEECCCC
Confidence 579999998874
No 444
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=93.49 E-value=0.56 Score=39.54 Aligned_cols=94 Identities=16% Similarity=0.196 Sum_probs=57.1
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHHHc
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
....++.+||-.|+|. |..+..+++ .|. .|++++.++.-.+.+++. +.. .... .+.. .+. .
T Consensus 26 ~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~-----~d~~----~~~--~ 91 (195)
T TIGR00477 26 VKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDA-----YDIN----AAA--L 91 (195)
T ss_pred hccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe-----ccch----hcc--c
Confidence 4445567899888754 666666766 477 789999998776655432 322 1111 1111 010 1
Q ss_pred CCCccEEEECC-----CC---HHHHHHHHHhcccCCEEEEE
Q 017916 252 GTGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 252 ~~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~ 284 (364)
...+|+|+... .. ...+..+.+.|+|+|.++.+
T Consensus 92 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 92 NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 34699997642 11 35677888999999996554
No 445
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=93.45 E-value=3.4 Score=37.27 Aligned_cols=56 Identities=20% Similarity=0.271 Sum_probs=43.5
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeE
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNI 230 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~ 230 (364)
+...+.++++|+...+|..|.+.+..|+.+|.+.++++.. ++.|.+.++.+|++-.
T Consensus 52 ~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~ 109 (290)
T TIGR01138 52 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELI 109 (290)
T ss_pred HcCCCCCCCEEEEECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 4455677887766566999999999999999987666643 4578888899998744
No 446
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=93.40 E-value=0.97 Score=42.14 Aligned_cols=82 Identities=18% Similarity=0.144 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-CHHHHH--HHHHHHHCCCCEEEEEecCh---h-H------------HHHHHHcCCCe-EEecCCC-ccc
Q 017916 181 PETNVLIMGA-GPIGLV--TMLGARAFGAPRIVIVDVDD---Y-R------------LSVAKELGADN-IVKVSTN-LQD 239 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~--ai~la~~~g~~~vv~~~~~~---~-~------------~~~~~~lg~~~-~~~~~~~-~~~ 239 (364)
-+.++||+|+ +++|.+ .++.+ ..|+. ++++.... + + .+.++++|... .+..+-. .++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 4578899997 899998 44455 78995 44554211 1 1 23445566532 2333322 233
Q ss_pred HHHHHHHHHHHcCCCccEEEECCCCH
Q 017916 240 IAEEVEKIQKAMGTGIDVSFDCAGFN 265 (364)
Q Consensus 240 ~~~~i~~~~~~~~~~~d~vid~~g~~ 265 (364)
..+.+..+.+.. +++|+++++++.+
T Consensus 118 v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhc-CCCCEEEECCccC
Confidence 444444444433 4799999998865
No 447
>PLN03013 cysteine synthase
Probab=93.37 E-value=2.7 Score=39.90 Aligned_cols=56 Identities=23% Similarity=0.306 Sum_probs=43.5
Q ss_pred HHcCCCCCCEEEEEc-CCHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeE
Q 017916 175 RRANIGPETNVLIMG-AGPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNI 230 (364)
Q Consensus 175 ~~~~~~~g~~VLI~G-ag~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~ 230 (364)
+...+++|.+.+|.. +|..|++.+..|+.+|.+.++++. .+++|.+.++.+|++-+
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi 225 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELV 225 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEE
Confidence 456678886666664 599999999999999998766653 36678889999998654
No 448
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.34 E-value=0.34 Score=49.12 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
..+.+|+|.|+|+.|++++..++..|++ |++++..
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~-V~V~E~~ 359 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVA-VTVYDRH 359 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecC
Confidence 3578999999999999999999999995 6666654
No 449
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.33 E-value=0.56 Score=41.42 Aligned_cols=77 Identities=21% Similarity=0.223 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 258 (364)
.+.++||+|+ |.+|.+.++.+...|+ .|+.++.+.++... .... .+..+- ..+++.+.+..+... -+++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~-~~~~D~~~~~~~~~~~~~~~~~-~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQ-FVPTDVSSAEEVNHTVAEIIEK-FGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceE-EEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 4678999998 9999999999999999 46666555443211 1111 111121 123333333333322 2479999
Q ss_pred EECCC
Q 017916 259 FDCAG 263 (364)
Q Consensus 259 id~~g 263 (364)
|.++|
T Consensus 82 i~~Ag 86 (266)
T PRK06171 82 VNNAG 86 (266)
T ss_pred EECCc
Confidence 99887
No 450
>PRK06123 short chain dehydrogenase; Provisional
Probab=93.30 E-value=0.99 Score=39.24 Aligned_cols=82 Identities=20% Similarity=0.201 Sum_probs=46.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 254 (364)
+.++||+|+ |.+|...++.....|+.+++...+++++... ++..+... .+..+- ..+++.+.+..+.+. .++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hCC
Confidence 457999998 9999999988888898544333334333222 23334321 222221 123334444433322 247
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06123 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 451
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.28 E-value=2.1 Score=39.20 Aligned_cols=90 Identities=23% Similarity=0.327 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.++.|.|.|.+|++.++.++.+|. .|+..+++.. .+..+.+++.++ ++.+.+ ...|++.-
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell--------~~sDii~l 206 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELL--------AESDIISL 206 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHH--------HhCCEEEE
Confidence 48999999999999999999999999 5777766654 333344554432 122222 24677654
Q ss_pred -CCCCHHHHH----HHHHhcccCCEEEEEcCCC
Q 017916 261 -CAGFNKTMS----TALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 261 -~~g~~~~~~----~~~~~l~~~G~~v~~g~~~ 288 (364)
|-.++++.. ..++.|++++.+|..+.+.
T Consensus 207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 444444332 4778999999999887543
No 452
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.28 E-value=1.1 Score=42.02 Aligned_cols=35 Identities=40% Similarity=0.494 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
.+.+|+|.|+|++|..++..+...|...+..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999988888765
No 453
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.26 E-value=1.1 Score=39.36 Aligned_cols=82 Identities=18% Similarity=0.327 Sum_probs=47.2
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh--hHH-HHHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcC
Q 017916 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD--YRL-SVAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 252 (364)
Q Consensus 181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~--~~~-~~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~ 252 (364)
.+.+++|+|+ +++|.+.++.+...|+ .|+.++++. +.. ++.++++.. ..+..|-. .++..+.+..+.+. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH-V 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH-c
Confidence 4678999985 6899999998888999 456565432 222 233444421 12222221 22333333333322 3
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|++|+++|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 579999998873
No 454
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.25 E-value=0.94 Score=39.58 Aligned_cols=83 Identities=18% Similarity=0.304 Sum_probs=47.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHc---
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAM--- 251 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~--- 251 (364)
+.+++|+|+ |.+|...++.+...|+++++...++.++.+ ....+ +.. ..+..+- ..+++.+.++......
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 578999998 999999999888889954443445554432 22232 221 1222221 1233333333333221
Q ss_pred --CCCccEEEECCCC
Q 017916 252 --GTGIDVSFDCAGF 264 (364)
Q Consensus 252 --~~~~d~vid~~g~ 264 (364)
..++|++|.++|.
T Consensus 86 ~~~~~id~vi~~ag~ 100 (254)
T PRK12746 86 VGTSEIDILVNNAGI 100 (254)
T ss_pred cCCCCccEEEECCCC
Confidence 1469999998864
No 455
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.22 E-value=1.6 Score=35.52 Aligned_cols=87 Identities=16% Similarity=0.230 Sum_probs=56.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (364)
Q Consensus 184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g 263 (364)
+|-+.|.|..|...++-+...|+ .|.+.++++++.+.+.+.|+..+ + + .+++. ...|+||-|+.
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~----s----~~e~~----~~~dvvi~~v~ 66 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA---D----S----PAEAA----EQADVVILCVP 66 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE---S----S----HHHHH----HHBSEEEE-SS
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh---h----h----hhhHh----hcccceEeecc
Confidence 68888999999988888888899 67888999999888877774322 1 1 22232 23589998888
Q ss_pred CHHHHHHH------HHhcccCCEEEEEcC
Q 017916 264 FNKTMSTA------LSATRAGGKVCLVGM 286 (364)
Q Consensus 264 ~~~~~~~~------~~~l~~~G~~v~~g~ 286 (364)
+.+..... +..+.++..++.++.
T Consensus 67 ~~~~v~~v~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 67 DDDAVEAVLFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp SHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred cchhhhhhhhhhHHhhccccceEEEecCC
Confidence 76555554 334556666776654
No 456
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.21 E-value=2.1 Score=36.98 Aligned_cols=104 Identities=19% Similarity=0.305 Sum_probs=64.9
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
+....+++.+||-.|+|. |..+..+++..+ ...+++++.+++..+.+++.-. ...+.+.. .++.+ ..
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~----~~- 116 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEA----LP- 116 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--ccccc----CC-
Confidence 445566788999998866 778888888775 3379999998887777765321 11011100 11110 00
Q ss_pred HcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916 250 AMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 250 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
.....+|+|+.... ....+..+.+.|+++|.++.+..
T Consensus 117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~ 159 (239)
T PRK00216 117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF 159 (239)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence 11346898874321 24567788999999999988754
No 457
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=93.18 E-value=0.87 Score=41.49 Aligned_cols=89 Identities=12% Similarity=0.177 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|.|.|.|.+|...++.++.+|+ .|++.+.+.++.. +..... ...+ +.++. ...|+|+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~----l~e~l----~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREE----LSAFL----SQTRVLIN 196 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----cccc----HHHHH----hcCCEEEE
Confidence 57899999999999999999999999 5777765443211 111111 0112 22222 35788888
Q ss_pred CCCCHHH----H-HHHHHhcccCCEEEEEcCC
Q 017916 261 CAGFNKT----M-STALSATRAGGKVCLVGMG 287 (364)
Q Consensus 261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~ 287 (364)
+....+. + ...++.|+++..++.++.+
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCc
Confidence 7664322 1 2467788999988888753
No 458
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=93.14 E-value=0.71 Score=37.88 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=52.3
Q ss_pred CCCCCEEEEEcCCH-HHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 179 IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 179 ~~~g~~VLI~Gag~-~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
--.|.+|||.|+|. +|..++..++..|+ .+.++.+.. +++.+.+ ..+|+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------~~l~~~l--------~~aDi 90 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------KNLKEHT--------KQADI 90 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------hhHHHHH--------hhCCE
Confidence 35789999999976 69989999998999 455554331 1111111 35899
Q ss_pred EEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
||.+++++..+.. +.++++-.++.++.+.
T Consensus 91 VIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 91 VIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred EEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 9999997654332 3466666677776543
No 459
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.13 E-value=1.2 Score=42.03 Aligned_cols=39 Identities=26% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh
Q 017916 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY 217 (364)
Q Consensus 178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~ 217 (364)
+-..+.+|||+|+ |.+|..+++.+...|. .|+++.++..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~ 95 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKS 95 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechh
Confidence 3456789999998 9999999999988898 4666666553
No 460
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=93.13 E-value=0.61 Score=35.89 Aligned_cols=92 Identities=20% Similarity=0.209 Sum_probs=52.7
Q ss_pred EEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecCh-hHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916 184 NVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDD-YRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~-~~~~~~~~lg----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 256 (364)
+|.|.|+ |.+|...++++... .++.+..+.++. ....+...++ .... .+.+ .+ ...+ .++|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~--~~----~~~~-----~~~D 68 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL-SVED--AD----PEEL-----SDVD 68 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE-BEEE--TS----GHHH-----TTES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce-eEee--cc----hhHh-----hcCC
Confidence 5889997 99999999998763 554444454444 2222322222 1111 1111 01 1111 5799
Q ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287 (364)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (364)
++|.|.+.....+..-+.+..+-+++.++..
T Consensus 69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 69 VVFLALPHGASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp EEEE-SCHHHHHHHHHHHHHTTSEEEESSST
T ss_pred EEEecCchhHHHHHHHHHhhCCcEEEeCCHH
Confidence 9999999555544555556777788887643
No 461
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.10 E-value=1.3 Score=37.98 Aligned_cols=78 Identities=26% Similarity=0.284 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh----------hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD----------YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~----------~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
-.|.+|+|.|-|.+|+.+++++...|+++|.+.+.+. +..+..++.+... .+.. .+..+ -.++
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~--~~~~--~~~~~-~~~l-- 93 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSA--RVKV--QDYFP-GEAI-- 93 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCcc--ccCc--ccccC-cccc--
Confidence 3688999999999999999999999997777777766 5666555544221 1111 00000 0011
Q ss_pred HcCCCccEEEECCCCH
Q 017916 250 AMGTGIDVSFDCAGFN 265 (364)
Q Consensus 250 ~~~~~~d~vid~~g~~ 265 (364)
...++|+++-|+...
T Consensus 94 -~~~~~DVlipaA~~~ 108 (217)
T cd05211 94 -LGLDVDIFAPCALGN 108 (217)
T ss_pred -eeccccEEeeccccC
Confidence 134789999888743
No 462
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.09 E-value=0.57 Score=41.85 Aligned_cols=86 Identities=17% Similarity=0.228 Sum_probs=58.4
Q ss_pred HHHHHHcCC-CCCCEEEEEcCCH-HHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916 171 LHACRRANI-GPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (364)
Q Consensus 171 ~~~l~~~~~-~~g~~VLI~Gag~-~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~ 248 (364)
+..++..++ -.|.+|+|.|.|. +|..++.++...|++ |.++.+.. .++. +..
T Consensus 146 ~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~l~----~~~ 199 (286)
T PRK14175 146 MEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KDMA----SYL 199 (286)
T ss_pred HHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hhHH----HHH
Confidence 334455432 4789999999855 999999999999995 44443211 1111 121
Q ss_pred HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
...|++|.++|.+..+.. +.++++..++.+|...
T Consensus 200 ----~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 200 ----KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred ----hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 468999999997766554 4578888888888543
No 463
>PRK05599 hypothetical protein; Provisional
Probab=93.09 E-value=1.2 Score=38.98 Aligned_cols=78 Identities=18% Similarity=0.214 Sum_probs=45.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC--eEEecCCC-cccHHHHHHHHHHHcCCCc
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~~ 255 (364)
++||+|+ +++|.+.+.... .|. .|+.+.++.++.+.+ + +.+.. ..+..|-. .++..+.+..+.+. .+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL-AGEI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh-cCCC
Confidence 6899998 999988888766 487 566666666655432 2 23432 22333222 23333333333322 3579
Q ss_pred cEEEECCCC
Q 017916 256 DVSFDCAGF 264 (364)
Q Consensus 256 d~vid~~g~ 264 (364)
|+++.++|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999988874
No 464
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=92.98 E-value=1 Score=45.81 Aligned_cols=82 Identities=24% Similarity=0.360 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCe--EEecCC-CcccHHHHHHHHHHHc
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN--IVKVST-NLQDIAEEVEKIQKAM 251 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~--~~~~~~-~~~~~~~~i~~~~~~~ 251 (364)
.+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +.+ +... .+..+- ...++.+.+.+....
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~- 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA- 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence 4789999998 9999999999988999 567777766554332 222 3211 122221 123333333333322
Q ss_pred CCCccEEEECCCC
Q 017916 252 GTGIDVSFDCAGF 264 (364)
Q Consensus 252 ~~~~d~vid~~g~ 264 (364)
-+++|++|+++|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999874
No 465
>PRK12827 short chain dehydrogenase; Provisional
Probab=92.96 E-value=1.1 Score=38.91 Aligned_cols=31 Identities=29% Similarity=0.483 Sum_probs=25.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV 212 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~ 212 (364)
.+.++||+|+ |.+|...+..+...|++ ++.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~-v~~~ 36 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGAD-VIVL 36 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEE
Confidence 3568999998 99999999888889995 4443
No 466
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.90 E-value=1 Score=39.49 Aligned_cols=97 Identities=20% Similarity=0.221 Sum_probs=54.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-H-cCCCeE-EecCCCcccHHHHHHHHHHHcCCCccE
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E-LGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~-lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~ 257 (364)
+.+|||+|+ |.+|..+++.+...|++ |+++.++.++..... . .++..+ .|+.+ .. + .+.+..+.++|+
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~~-~---~l~~~~~~~~d~ 88 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFA-VKAGVRDVDKAKTSLPQDPSLQIVRADVTE---GS-D---KLVEAIGDDSDA 88 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCE-EEEEecCHHHHHHhcccCCceEEEEeeCCC---CH-H---HHHHHhhcCCCE
Confidence 578999998 99999999888888984 666656655533221 1 112211 12211 11 1 121212247999
Q ss_pred EEECCCCHH-------------HHHHHHHhccc--CCEEEEEcC
Q 017916 258 SFDCAGFNK-------------TMSTALSATRA--GGKVCLVGM 286 (364)
Q Consensus 258 vid~~g~~~-------------~~~~~~~~l~~--~G~~v~~g~ 286 (364)
+|.+.|... ....+++.+.. .++++.++.
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS 132 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS 132 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence 998876421 12344555543 367887763
No 467
>PRK07102 short chain dehydrogenase; Provisional
Probab=92.87 E-value=1.1 Score=38.82 Aligned_cols=77 Identities=25% Similarity=0.280 Sum_probs=45.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc---CCCe--EEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL---GADN--IVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l---g~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
.+++|+|+ |.+|...++.+...|+ .|+++++++++.+. .+.+ +... .+..+-. + .+.+++..+.....+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~-~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDIL--D-TASHAAFLDSLPALP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCC--C-hHHHHHHHHHHhhcC
Confidence 47999998 9999999999988899 56777777665432 2222 1111 2222211 1 122333332223457
Q ss_pred cEEEECCC
Q 017916 256 DVSFDCAG 263 (364)
Q Consensus 256 d~vid~~g 263 (364)
|+++.++|
T Consensus 78 d~vv~~ag 85 (243)
T PRK07102 78 DIVLIAVG 85 (243)
T ss_pred CEEEECCc
Confidence 99998776
No 468
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=92.86 E-value=2.6 Score=36.99 Aligned_cols=99 Identities=20% Similarity=0.311 Sum_probs=63.1
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHcCC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
+.....++.+||-.|+|. |..+..+++ .|. .+++++.+++..+.+++... ...+.- |.. .+. ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-----d~~----~~~-~~~~ 102 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-----DIE----SLP-LATA 102 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-----Ccc----cCc-CCCC
Confidence 444445678899998754 555555554 466 79999999998888876532 122211 111 010 0134
Q ss_pred CccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916 254 GIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 254 ~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
.+|+|+.... ....+.++.+.|+|+|.++....
T Consensus 103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 6999986432 13567889999999999987653
No 469
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=92.86 E-value=0.81 Score=39.33 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=59.9
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEE-------ecCCC-----cccHHHH
Q 017916 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIV-------KVSTN-----LQDIAEE 243 (364)
Q Consensus 177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~-------~~~~~-----~~~~~~~ 243 (364)
....++.+||+.|+|. |.-++.||. .|+ .|++++.++...+.+ ++.+..... .+... ..|+.
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~-- 107 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFF-- 107 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECccc--
Confidence 3446678999998765 777777775 699 699999998877654 333332100 00000 01111
Q ss_pred HHHHHHHcCCCccEEEECCC----C----HHHHHHHHHhcccCCEEEEE
Q 017916 244 VEKIQKAMGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 244 i~~~~~~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~ 284 (364)
.+.......+|.++|... . ...+..+.++|+|+|+++.+
T Consensus 108 --~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 108 --ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred --CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 011101246899998542 1 24577889999999875544
No 470
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=92.86 E-value=0.12 Score=41.45 Aligned_cols=95 Identities=18% Similarity=0.159 Sum_probs=55.3
Q ss_pred EEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC----CCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS----TNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
|+|.|+|++|...+..++..|. .|..+.+++ +.+.+++-|......-. ......... ......+|++|-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV 73 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence 6889999999988888888888 566666666 66666665543211000 000000000 011368999999
Q ss_pred CCCCH---HHHHHHHHhcccCCEEEEEcC
Q 017916 261 CAGFN---KTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 261 ~~g~~---~~~~~~~~~l~~~G~~v~~g~ 286 (364)
|+=+. +.++.+...+.+...++.+..
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence 88643 344445555566667777643
No 471
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.84 E-value=1.4 Score=39.21 Aligned_cols=82 Identities=26% Similarity=0.300 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH--------HHH---HHHcCCCe-EEecC-CCcccHHHHHHH
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--------LSV---AKELGADN-IVKVS-TNLQDIAEEVEK 246 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~--------~~~---~~~lg~~~-~~~~~-~~~~~~~~~i~~ 246 (364)
.+.++||+|+ |.+|...++.+...|++ |+++.++.++ .+. ++..+... .+..+ ...++..+.+..
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGAN-IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4578999998 99999999988889994 6666554321 111 22233321 12112 122333344444
Q ss_pred HHHHcCCCccEEEECCCC
Q 017916 247 IQKAMGTGIDVSFDCAGF 264 (364)
Q Consensus 247 ~~~~~~~~~d~vid~~g~ 264 (364)
+.+.. +++|++|+++|.
T Consensus 84 ~~~~~-g~id~li~~ag~ 100 (273)
T PRK08278 84 AVERF-GGIDICVNNASA 100 (273)
T ss_pred HHHHh-CCCCEEEECCCC
Confidence 33322 379999998874
No 472
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=92.83 E-value=1.1 Score=39.51 Aligned_cols=28 Identities=21% Similarity=0.307 Sum_probs=23.6
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEE
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIV 212 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~ 212 (364)
++||+|+ +++|.+.++.+...|++ |+.+
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~~-V~~~ 31 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGYR-VVLH 31 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCCe-EEEE
Confidence 6899998 99999999999999995 4444
No 473
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.83 E-value=0.58 Score=41.90 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=56.1
Q ss_pred HHHcC-CCCCCEEEEEcCCH-HHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CRRAN-IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~~~~-~~~g~~VLI~Gag~-~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
++..+ --.|.+|+|.|.|. +|...+.++...|+ .|.++.+. . +++.+.+
T Consensus 150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~---t------------------~~L~~~~------- 200 (283)
T PRK14192 150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR---T------------------QNLPELV------- 200 (283)
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC---c------------------hhHHHHh-------
Confidence 44433 35788999999966 99999999999999 56655321 0 1111111
Q ss_pred CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287 (364)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (364)
..+|++|+++|.+..+. .+.++++..++.++..
T Consensus 201 -~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n 233 (283)
T PRK14192 201 -KQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFH 233 (283)
T ss_pred -ccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEe
Confidence 46899999998655333 3568888888888754
No 474
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.83 E-value=0.85 Score=39.53 Aligned_cols=81 Identities=28% Similarity=0.402 Sum_probs=46.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHHHH-HHc---CCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVA-KEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~~~-~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 253 (364)
+.++||+|+ |.+|...+..+...|++ ++.+ +++.++.+.+ ..+ +... ++..+-. .+++.+.+..+.... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF-G 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-C
Confidence 468999998 99999988888788995 5555 6665544322 222 2211 2222211 123333333333222 3
Q ss_pred CccEEEECCCC
Q 017916 254 GIDVSFDCAGF 264 (364)
Q Consensus 254 ~~d~vid~~g~ 264 (364)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998873
No 475
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=92.83 E-value=3 Score=31.67 Aligned_cols=88 Identities=23% Similarity=0.262 Sum_probs=58.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHC--CCCEEEEEecChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 184 NVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 184 ~VLI~Gag~~G~~ai~la~~~--g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
+|.|.|.|..|.....-++.. +.+.+.+++.++++.+. .++++.. . |. ++. ++.. ..++|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~~~----~ll~--~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----DLE----ELLA--DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----SHH----HHHH--HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----HHH----HHHH--hhcCCEEEE
Confidence 578899998888877555554 45444556667666654 4667776 2 22 222 2222 247999999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEc
Q 017916 261 CAGFNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
++....+...+..++..|- .+++.
T Consensus 69 ~tp~~~h~~~~~~~l~~g~-~v~~E 92 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGK-HVLVE 92 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTS-EEEEE
T ss_pred ecCCcchHHHHHHHHHcCC-EEEEE
Confidence 9998888888888888655 45553
No 476
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.82 E-value=2.8 Score=38.01 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=25.8
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEE
Q 017916 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIV 210 (364)
Q Consensus 181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv 210 (364)
.|.++||+|+ +++|.+.++.+...|+++++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 5789999987 78999999999999996444
No 477
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=92.73 E-value=0.56 Score=43.44 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=29.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh
Q 017916 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY 217 (364)
Q Consensus 181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~ 217 (364)
.|.+|||+|+ |.+|..+++.+...|.+ |++++++..
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~-V~~~~r~~~ 39 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAE-VYGYSLDPP 39 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCE-EEEEeCCCc
Confidence 3679999998 99999999999999984 666665543
No 478
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=92.65 E-value=0.96 Score=39.49 Aligned_cols=79 Identities=20% Similarity=0.281 Sum_probs=46.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
++||+|+ |.+|...++.+...|+ .++.+.+++++.+ ..+. .+... .+..+- ..+++.+.+..+... .+++|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id 79 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGFD 79 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCCC
Confidence 6899998 9999999999989999 5666666654432 2222 23221 222221 123333334444332 24789
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99998873
No 479
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=92.64 E-value=1.7 Score=43.11 Aligned_cols=93 Identities=13% Similarity=0.117 Sum_probs=61.5
Q ss_pred CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (364)
Q Consensus 183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 262 (364)
++++|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.- |..+ .+.+++. .-+.+|.++-++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a---~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLA---HLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhc---CccccCEEEEEc
Confidence 789999999999999999999998 5899999999999998887654432 2222 2222222 235788887776
Q ss_pred CCHHHHH---HHHHhcccCCEEEE
Q 017916 263 GFNKTMS---TALSATRAGGKVCL 283 (364)
Q Consensus 263 g~~~~~~---~~~~~l~~~G~~v~ 283 (364)
++.+.-. .+.+...+.-+++.
T Consensus 490 ~~~~~~~~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 490 PNGYEAGEIVASAREKRPDIEIIA 513 (558)
T ss_pred CChHHHHHHHHHHHHHCCCCeEEE
Confidence 6533221 23344445555443
No 480
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=92.63 E-value=1 Score=36.25 Aligned_cols=94 Identities=21% Similarity=0.315 Sum_probs=58.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH-----HcCCCcc
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK-----AMGTGID 256 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~d 256 (364)
.+|+|+|+ |++|.++++.-|+.++ -|..++.++... ++.-+..+ ...+|.++-..+.+ ..+.++|
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-------Ad~sI~V~-~~~swtEQe~~v~~~vg~sL~gekvD 74 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-------ADSSILVD-GNKSWTEQEQSVLEQVGSSLQGEKVD 74 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-------ccceEEec-CCcchhHHHHHHHHHHHHhhcccccc
Confidence 57999998 9999999999999999 567776554321 22212221 22344443322221 1267899
Q ss_pred EEEECCCCH--------H------------------HHHHHHHhcccCCEEEEEc
Q 017916 257 VSFDCAGFN--------K------------------TMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 257 ~vid~~g~~--------~------------------~~~~~~~~l~~~G~~v~~g 285 (364)
.||+-+|+- + ....+-.+|+++|-+-+.|
T Consensus 75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtG 129 (236)
T KOG4022|consen 75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTG 129 (236)
T ss_pred eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecc
Confidence 999876631 1 1112345788999887776
No 481
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=92.62 E-value=3.4 Score=37.95 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHH-HCCCCEEEEEecChhHHH-HHHHc----CCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916 180 GPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (364)
Q Consensus 180 ~~g~~VLI~Gag~~G~~ai~la~-~~g~~~vv~~~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 253 (364)
+...+++|.|+|..+.+.+..+. ..+.+.+.+..++.+|.+ +++++ +.. +..+ .+..+.+ .
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~ 193 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S 193 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence 45578999999988877777665 578888888888887755 33444 432 2221 1222211 4
Q ss_pred CccEEEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
+.|+|+.|+.+.+.+ ...+.++++-++..+|.
T Consensus 194 ~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~ 225 (326)
T TIGR02992 194 GADIIVTTTPSETPI-LHAEWLEPGQHVTAMGS 225 (326)
T ss_pred cCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCC
Confidence 689999998864321 12346788777777774
No 482
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=92.50 E-value=3.6 Score=31.02 Aligned_cols=92 Identities=18% Similarity=0.165 Sum_probs=58.7
Q ss_pred EEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (364)
Q Consensus 185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~ 264 (364)
|+|.|.|.+|...++.++..+. .+++++.++++.+.++..|.. ++.-+..+. +.+++ ..-..++.++-+.++
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~---~~l~~---a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDP---EVLER---AGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSH---HHHHH---TTGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhh---hHHhh---cCccccCEEEEccCC
Confidence 6788999999999999999665 789999999999999888844 333222222 22222 223578888888775
Q ss_pred HHHHH---HHHHhcccCCEEEEE
Q 017916 265 NKTMS---TALSATRAGGKVCLV 284 (364)
Q Consensus 265 ~~~~~---~~~~~l~~~G~~v~~ 284 (364)
.+.-. ...+.+.+..+++..
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEE
Confidence 43222 233444556666654
No 483
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=92.49 E-value=1.9 Score=41.92 Aligned_cols=102 Identities=22% Similarity=0.266 Sum_probs=64.6
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc--CCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL--GADNIVKVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l--g~~~~~~~~~~~~~~~~~i~~~~~~~~ 252 (364)
+...++++++||-.|+|. |..++.+++..+. .+++++.+++..+.+++. +...-+.+.. .++.+ . ....
T Consensus 260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~--~d~~~----~-~~~~ 330 (475)
T PLN02336 260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV--ADCTK----K-TYPD 330 (475)
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE--cCccc----C-CCCC
Confidence 344567889999998755 5667788887887 799999998877776542 2111011100 11110 0 0012
Q ss_pred CCccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916 253 TGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 253 ~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g 285 (364)
+.+|+|+.... ....+..+.+.|+|+|+++...
T Consensus 331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~ 369 (475)
T PLN02336 331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISD 369 (475)
T ss_pred CCEEEEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 46999986321 1467789999999999988764
No 484
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=92.43 E-value=4 Score=37.53 Aligned_cols=88 Identities=20% Similarity=0.158 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.|.+|.|.|.|.+|...++.++.+|. .|++.+.+.+..... .. + ..+ +.+.. ...|+|+-
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~---~~~----l~ell----~~aDiVil 204 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----Y---KDS----VKEAI----KDADIISL 204 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----c---cCC----HHHHH----hcCCEEEE
Confidence 56789999999999999999999999 677887665432110 00 1 012 22221 35799888
Q ss_pred CCCCHH-----HHHHHHHhcccCCEEEEEcCCC
Q 017916 261 CAGFNK-----TMSTALSATRAGGKVCLVGMGH 288 (364)
Q Consensus 261 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~ 288 (364)
++.... .....+..|+++..++..+.+.
T Consensus 205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~ 237 (330)
T PRK12480 205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA 237 (330)
T ss_pred eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence 776432 2234667888888888886543
No 485
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=92.36 E-value=2 Score=40.16 Aligned_cols=35 Identities=31% Similarity=0.532 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~ 215 (364)
.+.+|+|.|+|++|..++..+.+.|...+..++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35789999999999999999999999888888754
No 486
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=92.33 E-value=0.9 Score=38.48 Aligned_cols=97 Identities=22% Similarity=0.260 Sum_probs=69.4
Q ss_pred HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
+..+.+-..|.=.|.|. |...-.|+++....++.++++|++..+.+++...+.-+. . ..++.|+. ....
T Consensus 25 ~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~--~------aDl~~w~p--~~~~ 93 (257)
T COG4106 25 RVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFE--E------ADLRTWKP--EQPT 93 (257)
T ss_pred hCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCcee--c------ccHhhcCC--CCcc
Confidence 33445566777778777 888999999987779999999999999888766543221 1 12566643 3467
Q ss_pred cEEEECCC------CHHHHHHHHHhcccCCEEEE
Q 017916 256 DVSFDCAG------FNKTMSTALSATRAGGKVCL 283 (364)
Q Consensus 256 d~vid~~g------~~~~~~~~~~~l~~~G~~v~ 283 (364)
|++|..+- -++.+..++..|+|||.+..
T Consensus 94 dllfaNAvlqWlpdH~~ll~rL~~~L~Pgg~LAV 127 (257)
T COG4106 94 DLLFANAVLQWLPDHPELLPRLVSQLAPGGVLAV 127 (257)
T ss_pred chhhhhhhhhhccccHHHHHHHHHhhCCCceEEE
Confidence 88875432 25788899999999998754
No 487
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=92.32 E-value=4 Score=35.78 Aligned_cols=103 Identities=13% Similarity=0.203 Sum_probs=66.1
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHc-
Q 017916 178 NIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM- 251 (364)
Q Consensus 178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~- 251 (364)
+.....+||-.|. .+|..++.+|+.++. ..+++++.++++.+.++ +.|...-+.+. ..+..+.+..+....
T Consensus 76 ~~~~ak~iLEiGT-~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~--~G~a~e~L~~l~~~~~ 152 (247)
T PLN02589 76 KLINAKNTMEIGV-YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFR--EGPALPVLDQMIEDGK 152 (247)
T ss_pred HHhCCCEEEEEeC-hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eccHHHHHHHHHhccc
Confidence 3344568888885 458888889887642 27999999888776654 45643323321 134455555543321
Q ss_pred -CCCccEEE-ECCC--CHHHHHHHHHhcccCCEEEE
Q 017916 252 -GTGIDVSF-DCAG--FNKTMSTALSATRAGGKVCL 283 (364)
Q Consensus 252 -~~~~d~vi-d~~g--~~~~~~~~~~~l~~~G~~v~ 283 (364)
.+.||+|| |+-- -.+.+..+++.|++||.++.
T Consensus 153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred cCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 25799997 4322 13567788999999998775
No 488
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=92.29 E-value=1.7 Score=40.11 Aligned_cols=103 Identities=21% Similarity=0.310 Sum_probs=64.3
Q ss_pred HHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHc
Q 017916 174 CRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAM 251 (364)
Q Consensus 174 l~~~~~-~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~ 251 (364)
++...+ .++++||-.|+|. |..+..+++..+...+++++.+++-.+.+++... ..+ .+ ...+.. ++. ..
T Consensus 105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i-~~--i~gD~e----~lp-~~ 175 (340)
T PLN02490 105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC-KI--IEGDAE----DLP-FP 175 (340)
T ss_pred HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCC-eE--EeccHH----hCC-CC
Confidence 343443 4678999998755 6677788887755579999998887777665321 111 11 011211 110 01
Q ss_pred CCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916 252 GTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 252 ~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g 285 (364)
.+.+|+|+.+.. ....++++.+.|+++|+++..+
T Consensus 176 ~~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~ 215 (340)
T PLN02490 176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIG 215 (340)
T ss_pred CCceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 346899886421 1357788999999999998765
No 489
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.29 E-value=1.7 Score=37.93 Aligned_cols=80 Identities=24% Similarity=0.246 Sum_probs=45.7
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hH-HHHHH---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YR-LSVAK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (364)
Q Consensus 183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~-~~~~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~ 254 (364)
.++||+|+ |.+|...+..+...|++ ++.++++. .+ ..... ..+.. ..+..+-. ..++.+.+..+.+. -++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAA-WGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHh-cCC
Confidence 47899998 99999999999889995 55555433 22 22222 22321 22222221 23333333333332 246
Q ss_pred ccEEEECCCC
Q 017916 255 IDVSFDCAGF 264 (364)
Q Consensus 255 ~d~vid~~g~ 264 (364)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 9999998873
No 490
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=92.29 E-value=2.9 Score=33.89 Aligned_cols=87 Identities=20% Similarity=0.223 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
.+.+|.|.|-|.-|.+-++=+|-.|.+++++........+.+++-|+.. .+..+.+ ...|+|+-
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv--------~~aDvV~~ 66 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEV--------MSVAEAV--------KKADVVML 66 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHH--------HC-SEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCee--------ccHHHHH--------hhCCEEEE
Confidence 4789999999888999999999999977777765555788888888752 1222222 35789888
Q ss_pred CCCCHHHHHH-----HHHhcccCCEEEEE
Q 017916 261 CAGFNKTMST-----ALSATRAGGKVCLV 284 (364)
Q Consensus 261 ~~g~~~~~~~-----~~~~l~~~G~~v~~ 284 (364)
.+. .+.... ....|+++-.+++.
T Consensus 67 L~P-D~~q~~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 67 LLP-DEVQPEVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp -S--HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred eCC-hHHHHHHHHHHHHhhCCCCCEEEeC
Confidence 776 333333 34567766666543
No 491
>PRK06940 short chain dehydrogenase; Provisional
Probab=92.24 E-value=1.7 Score=38.79 Aligned_cols=78 Identities=22% Similarity=0.324 Sum_probs=45.5
Q ss_pred CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (364)
Q Consensus 183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 256 (364)
.+++|+|+|++|.+.+..+. .|+ .|+.++++.++.+ ..+++ +.. ..+..|- ..+++.+.+..+ .. -+++|
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~id 78 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPVT 78 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCCC
Confidence 57888998899999888875 788 5666667665443 22222 322 1222222 122333333333 21 24799
Q ss_pred EEEECCCC
Q 017916 257 VSFDCAGF 264 (364)
Q Consensus 257 ~vid~~g~ 264 (364)
++|+++|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999874
No 492
>PRK06141 ornithine cyclodeaminase; Validated
Probab=92.21 E-value=5.3 Score=36.48 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=60.3
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHH-HCCCCEEEEEecChhHHH-HHHHc---CCCeEEecCCCcccHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL---GADNIVKVSTNLQDIAEEVEKIQK 249 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~-~~g~~~vv~~~~~~~~~~-~~~~l---g~~~~~~~~~~~~~~~~~i~~~~~ 249 (364)
+...-....+|+|.|+|..|...+.... ..+.+.+.+..++.++.+ +++++ +.. +... .+ +.+..
T Consensus 118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~----~~~av- 187 (314)
T PRK06141 118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TD----LEAAV- 187 (314)
T ss_pred HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CC----HHHHH-
Confidence 3333356789999999999988876444 467778889888887754 44444 321 1111 11 12111
Q ss_pred HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286 (364)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
.+.|+|+.|+.++..+ .-.+.++++-.+...|.
T Consensus 188 ---~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~ 220 (314)
T PRK06141 188 ---RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGN 220 (314)
T ss_pred ---hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCC
Confidence 4689999988865221 11256788776666664
No 493
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.21 E-value=1.4 Score=35.74 Aligned_cols=83 Identities=24% Similarity=0.353 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHHHHHcCCCeEEec-C-CCcccHHHHHHHHHHHcCCCc
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKV-S-TNLQDIAEEVEKIQKAMGTGI 255 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~~~~lg~~~~~~~-~-~~~~~~~~~i~~~~~~~~~~~ 255 (364)
.+|-.-||+|+ +++|.+++..+...|++ ++..+. +....+.++++|-.-++.- + .+.+|....+..... .-+.+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgas-v~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~-kfgrl 84 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGAS-VALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKA-KFGRL 84 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCce-EEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHh-hccce
Confidence 35666788865 99999999999999996 455554 4456788899997544321 1 223444443333322 13468
Q ss_pred cEEEECCCC
Q 017916 256 DVSFDCAGF 264 (364)
Q Consensus 256 d~vid~~g~ 264 (364)
|+.++|.|.
T Consensus 85 d~~vncagi 93 (260)
T KOG1199|consen 85 DALVNCAGI 93 (260)
T ss_pred eeeeeccce
Confidence 999999984
No 494
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=92.20 E-value=4.4 Score=36.46 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=62.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc--CCCeEEecC-CCcccHHHHHHHHHHHc-CCC
Q 017916 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL--GADNIVKVS-TNLQDIAEEVEKIQKAM-GTG 254 (364)
Q Consensus 180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l--g~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~ 254 (364)
..+..|||+|+ ++.|...+.-+...|+.+++++-.++...++..+. +--..+..| ..+++..+..+-..+.. ..+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 45567999998 99999999999999997777663333323333333 111122222 22334443333333322 345
Q ss_pred ccEEEECCCCH--------------------------HHHHHHHHhccc-CCEEEEEcCC
Q 017916 255 IDVSFDCAGFN--------------------------KTMSTALSATRA-GGKVCLVGMG 287 (364)
Q Consensus 255 ~d~vid~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~ 287 (364)
.--+++++|.. +.....+..+++ .||++.++..
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~ 166 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSV 166 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccc
Confidence 77788888721 233445556654 5999988743
No 495
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=92.19 E-value=0.72 Score=41.59 Aligned_cols=57 Identities=23% Similarity=0.302 Sum_probs=46.3
Q ss_pred HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeEE
Q 017916 175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIV 231 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~~ 231 (364)
....+.||.++||-.. |.+|...+-.+...|++.+++.- .+.+|...++.||+..+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 4478999999999876 99999999999999996555542 266889999999987544
No 496
>PLN00203 glutamyl-tRNA reductase
Probab=92.13 E-value=1.1 Score=43.77 Aligned_cols=74 Identities=22% Similarity=0.359 Sum_probs=50.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 260 (364)
+.+|+|.|+|.+|.++++.+...|+..++++.++.++.+.+ ..++-..+ .+ ..+.+ +... -.+.|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~----~~~~d-l~~a----l~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IY----KPLDE-MLAC----AAEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Ee----ecHhh-HHHH----HhcCCEEEE
Confidence 68999999999999999999999987788888888776544 44532111 11 01111 1111 146899999
Q ss_pred CCCCH
Q 017916 261 CAGFN 265 (364)
Q Consensus 261 ~~g~~ 265 (364)
|++++
T Consensus 336 AT~s~ 340 (519)
T PLN00203 336 STSSE 340 (519)
T ss_pred ccCCC
Confidence 98764
No 497
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=92.11 E-value=2.2 Score=38.93 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=60.1
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH---HHHHc-CCCeEEecCCCcccHHHHHHHHHHH
Q 017916 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKEL-GADNIVKVSTNLQDIAEEVEKIQKA 250 (364)
Q Consensus 175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~---~~~~l-g~~~~~~~~~~~~~~~~~i~~~~~~ 250 (364)
......+|++||-.|+|. |..+..+++ .|+..|++++.+..-.. .++.+ +...-+.+.. .+ +.++..
T Consensus 115 ~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~--~~----ie~lp~- 185 (314)
T TIGR00452 115 PHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP--LG----IEQLHE- 185 (314)
T ss_pred HhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE--CC----HHHCCC-
Confidence 445667789999998765 666666654 47767999998875433 23332 2111111100 11 111211
Q ss_pred cCCCccEEEECC-----CC-HHHHHHHHHhcccCCEEEEE
Q 017916 251 MGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLV 284 (364)
Q Consensus 251 ~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~ 284 (364)
...||+|+... .+ .+.+.++.++|++||+++..
T Consensus 186 -~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle 224 (314)
T TIGR00452 186 -LYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE 224 (314)
T ss_pred -CCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 23699998632 12 36888999999999999864
No 498
>PRK07069 short chain dehydrogenase; Validated
Probab=92.10 E-value=1.4 Score=38.30 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=45.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHHHH-HHHcC----CCeE--E--ecCCCcccHHHHHHHHHHHcC
Q 017916 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSV-AKELG----ADNI--V--KVSTNLQDIAEEVEKIQKAMG 252 (364)
Q Consensus 184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~~~-~~~lg----~~~~--~--~~~~~~~~~~~~i~~~~~~~~ 252 (364)
++||+|+ |.+|...++.+...|+ .|+.++++ .++.+. .+++. ...+ + |.. ..+++.+.+....+. -
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT-DEAQWQALLAQAADA-M 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecC-CHHHHHHHHHHHHHH-c
Confidence 3789987 9999999988888899 56666655 443332 22221 1111 1 221 223333333333322 2
Q ss_pred CCccEEEECCCC
Q 017916 253 TGIDVSFDCAGF 264 (364)
Q Consensus 253 ~~~d~vid~~g~ 264 (364)
+++|++|.++|.
T Consensus 78 ~~id~vi~~ag~ 89 (251)
T PRK07069 78 GGLSVLVNNAGV 89 (251)
T ss_pred CCccEEEECCCc
Confidence 469999999873
No 499
>PRK07411 hypothetical protein; Validated
Probab=92.07 E-value=1.5 Score=41.28 Aligned_cols=33 Identities=39% Similarity=0.502 Sum_probs=29.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214 (364)
Q Consensus 182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~ 214 (364)
..+|||.|+|++|..+++.+.+.|...+..+|.
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~ 70 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDF 70 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 468999999999999999999999998888864
No 500
>TIGR00308 TRM1 tRNA(guanine-26,N2-N2) methyltransferase. This enzyme is responsible for two methylations of a characteristic guanine of most tRNA molecules. The activity has been demonstrated for eukaryotic and archaeal proteins, which are active when expressed in E. coli, a species that lacks this enzyme. At least one Eubacterium, Aquifex aeolicus, has an ortholog, as do all completed archaeal genomes.
Probab=92.03 E-value=2.6 Score=39.43 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=63.4
Q ss_pred EEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE-E
Q 017916 187 IMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS-F 259 (364)
Q Consensus 187 I~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v-i 259 (364)
|.-+ +++|..++.+++.. |++.|+.++.+++..+.+++ .+...+..+. .|....+.. .+..+|+| +
T Consensus 48 vLD~faGsG~rgir~a~e~~ga~~Vv~nD~n~~Av~~i~~N~~~N~~~~~~v~~---~Da~~~l~~----~~~~fDvIdl 120 (374)
T TIGR00308 48 IADALSASGIRAIRYAHEIEGVREVFANDINPKAVESIKNNVEYNSVENIEVPN---EDAANVLRY----RNRKFHVIDI 120 (374)
T ss_pred EEECCCchhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEc---hhHHHHHHH----hCCCCCEEEe
Confidence 4444 66788899999875 88899999999988777654 3443222221 233332222 24579998 7
Q ss_pred ECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916 260 DCAGFN-KTMSTALSATRAGGKVCLVG 285 (364)
Q Consensus 260 d~~g~~-~~~~~~~~~l~~~G~~v~~g 285 (364)
|..|++ +.+..+++.++++|.+....
T Consensus 121 DPfGs~~~fld~al~~~~~~glL~vTa 147 (374)
T TIGR00308 121 DPFGTPAPFVDSAIQASAERGLLLVTA 147 (374)
T ss_pred CCCCCcHHHHHHHHHhcccCCEEEEEe
Confidence 999874 77788999999999887764
Done!