Citrus Sinensis ID: 017920

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
MAITTTRSLSVTPVTRRSATPINPLRSSSLSYSLTRPFGSNLTLKVPSFRVSASSMSSIHAPESASRTSFLDRRESGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERGAGATLACGTGACAVVVAAVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLLN
ccEEEEEEEECcccccccccccccccccccccccccccccCEEcccccccEEccccccccccccccccHcccccccccEEEEccccccccEEEEEccccccccccHHHHHHHHcccccccccEEEEEEcccccccEEEEEEcccccHHccccHHHHHHHHHHHHHcccccccEEEEEEccCEEEEEECccccEEECccccccccccccccccccccccEEEEEEEEccCEEEEEEEEccccEEEEEEcccccccccccccHHHccccccccccccccccEEEEEEEcccEEEEEEEcccccHcccccccHHHHHHHHHHHccccccEEEEEccccEEEEECccccCEEEEccccEEEEEEEEcc
*****T**LSV*****************************NLTLKVPSFRVSA*********************ESGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERGAGATLACGTGACAVVVAAVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLLN
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MAITTTRSLSVTPVTRRSATPINPLRSSSLSYSLTRPFGSNLTLKVPSFRVSASSMSSIHAPESASRTSFLDRRESGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERGAGATLACGTGACAVVVAAVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLLN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Diaminopimelate epimerase, chloroplastic confidentQ2QNF7
Diaminopimelate epimerase, chloroplastic Racemase that operates by a 'two-base' mechanism, which involves one active-site cysteine acting as a base to abstract the alpha-proton of an amino acid, while a second cysteine thiol functions as an acid to reprotonate the resulting planar carbanionic intermediate from the opposite face.confidentQ9LFG2
Putative diaminopimelate epimerase, chloroplastic probableA2ZLS4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.1.-.-Racemases and epimerases.probable
5.1.1.-Acting on amino acids and derivatives.probable
5.1.1.7Maleamate amidohydrolase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3EJX, chain A
Confidence level:very confident
Coverage over the Query: 77-363
View the alignment between query and template
View the model in PyMOL