SDN1 protein (Arabidopsis thaliana)

STRING 9.05

SDN1 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	SDN1	SDN1 (SMALL RNA DEGRADING NUCLEASE 1); 3'-5' exonuclease/ exonuclease; Encodes an exonuclease that degrades single-stranded small RNAs in vitro and limits the accumulation of small RNAs in vivo. ; 3'-5' exonuclease degrading single-stranded small RNAs (409 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G61390	exonuclease family protein; exonuclease family protein; FUNCTIONS IN- exonuclease activity, nuc [...] (487 aa)	•	0.921
	AT1G74390	exonuclease family protein; exonuclease family protein; FUNCTIONS IN- exonuclease activity, nuc [...] (506 aa)	•	0.921
	AT5G53360	seven in absentia (SINA) family protein; seven in absentia (SINA) family protein; FUNCTIONS IN- [...] (233 aa)	•	0.439
	HYL1	HYL1 (HYPONASTIC LEAVES 1); double-stranded RNA binding / miRNA binding / protein binding; Enco [...] (419 aa)	•	0.436
	HST	HST (HASTY); nucleocytoplasmic transporter; Encodes member of importin/exportin family. Involve [...] (1202 aa)	•	0.435

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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