Query 017926
Match_columns 363
No_of_seqs 233 out of 1163
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 07:08:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xqr_A HSPBP1 protein; armadil 100.0 3.7E-37 1.3E-41 296.7 16.5 213 115-336 14-238 (296)
2 4db6_A Armadillo repeat protei 99.9 4.1E-21 1.4E-25 171.1 19.7 180 146-332 25-205 (210)
3 4hxt_A De novo protein OR329; 99.9 4.9E-20 1.7E-24 166.8 21.6 192 133-333 4-196 (252)
4 4hxt_A De novo protein OR329; 99.8 9.9E-20 3.4E-24 164.8 20.1 193 132-333 45-238 (252)
5 4db8_A Armadillo-repeat protei 99.8 8.3E-20 2.8E-24 166.8 19.3 192 132-332 55-247 (252)
6 4db8_A Armadillo-repeat protei 99.8 1.4E-19 4.9E-24 165.3 17.6 179 147-332 26-205 (252)
7 4db6_A Armadillo repeat protei 99.8 8.5E-19 2.9E-23 156.1 18.0 157 170-333 8-164 (210)
8 3nmw_A APC variant protein; AR 99.8 9.8E-19 3.4E-23 172.0 17.1 207 135-353 131-348 (354)
9 3ul1_B Importin subunit alpha- 99.8 2.3E-17 7.7E-22 168.3 23.6 194 133-333 59-258 (510)
10 1xm9_A Plakophilin 1; armadill 99.8 9.2E-18 3.2E-22 169.3 19.2 191 133-333 4-217 (457)
11 3nmw_A APC variant protein; AR 99.8 2.4E-17 8.1E-22 162.1 20.1 187 146-334 97-290 (354)
12 3nmz_A APC variant protein; pr 99.8 8.5E-18 2.9E-22 170.7 16.8 201 134-346 246-457 (458)
13 3tpo_A Importin subunit alpha- 99.8 4.6E-17 1.6E-21 166.5 21.2 182 145-332 263-445 (529)
14 3tpo_A Importin subunit alpha- 99.7 1.5E-16 5.3E-21 162.6 22.9 194 133-333 78-277 (529)
15 3ul1_B Importin subunit alpha- 99.7 6.2E-17 2.1E-21 165.1 19.0 182 145-332 244-426 (510)
16 3nmz_A APC variant protein; pr 99.7 6.5E-17 2.2E-21 164.2 18.5 187 147-335 214-407 (458)
17 3tt9_A Plakophilin-2; cell adh 99.7 4.8E-17 1.6E-21 151.5 15.4 193 133-332 10-225 (233)
18 4b8j_A Importin subunit alpha- 99.7 1.1E-15 3.8E-20 154.8 25.0 192 133-333 76-270 (528)
19 4b8j_A Importin subunit alpha- 99.7 3.7E-16 1.3E-20 158.3 21.4 181 146-332 257-439 (528)
20 2jdq_A Importin alpha-1 subuni 99.7 4E-16 1.4E-20 153.0 20.4 181 146-332 205-386 (450)
21 1wa5_B Importin alpha subunit; 99.7 2.1E-15 7.3E-20 153.1 24.3 192 133-333 89-283 (530)
22 3tt9_A Plakophilin-2; cell adh 99.7 3E-16 1E-20 146.1 15.9 154 175-336 9-180 (233)
23 2jdq_A Importin alpha-1 subuni 99.7 1.7E-15 5.6E-20 148.6 20.4 193 132-333 65-260 (450)
24 1xm9_A Plakophilin 1; armadill 99.7 5.5E-16 1.9E-20 156.3 16.5 152 175-335 3-171 (457)
25 3now_A UNC-45 protein, SD10334 99.7 5.3E-16 1.8E-20 166.9 17.2 189 135-332 584-778 (810)
26 1wa5_B Importin alpha subunit; 99.7 2.5E-15 8.6E-20 152.6 21.1 192 134-334 218-410 (530)
27 1xqr_A HSPBP1 protein; armadil 99.7 8.3E-16 2.8E-20 147.7 15.9 152 134-289 84-238 (296)
28 1jdh_A Beta-catenin; beta-cate 99.7 3.5E-15 1.2E-19 149.6 20.1 193 132-332 60-252 (529)
29 2z6h_A Catenin beta-1, beta-ca 99.6 1.2E-14 4.3E-19 151.6 21.8 196 131-334 56-251 (644)
30 3l6x_A Catenin delta-1; cateni 99.6 4.3E-15 1.5E-19 154.8 17.4 192 133-333 50-267 (584)
31 3now_A UNC-45 protein, SD10334 99.6 5.3E-15 1.8E-19 159.1 17.9 180 146-333 549-734 (810)
32 3l6x_A Catenin delta-1; cateni 99.6 1.4E-14 4.9E-19 150.9 17.8 156 172-335 46-220 (584)
33 2z6g_A B-catenin; FULL-length, 99.6 6.6E-14 2.3E-18 150.1 20.9 192 133-332 194-385 (780)
34 1jdh_A Beta-catenin; beta-cate 99.5 9.7E-14 3.3E-18 139.1 16.8 193 133-335 19-214 (529)
35 2z6g_A B-catenin; FULL-length, 99.5 4.6E-13 1.6E-17 143.6 20.8 202 133-347 443-671 (780)
36 2z6h_A Catenin beta-1, beta-ca 99.5 4.2E-13 1.4E-17 140.0 19.5 193 133-335 16-211 (644)
37 3grl_A General vesicular trans 99.3 1.2E-10 4E-15 121.7 18.6 202 112-319 38-266 (651)
38 3opb_A SWI5-dependent HO expre 99.3 2.4E-11 8.1E-16 129.6 13.6 220 108-333 369-632 (778)
39 3opb_A SWI5-dependent HO expre 99.2 5.2E-11 1.8E-15 127.0 13.0 197 134-338 501-730 (778)
40 3grl_A General vesicular trans 98.9 2.1E-08 7.1E-13 104.8 17.7 211 127-348 17-253 (651)
41 3ltj_A Alpharep-4; protein eng 98.9 2.1E-07 7.2E-12 81.8 18.9 137 146-332 58-194 (201)
42 3ltm_A Alpha-REP4; protein eng 98.8 2E-07 6.9E-12 82.6 17.5 137 146-332 63-199 (211)
43 3ltm_A Alpha-REP4; protein eng 98.8 7.7E-08 2.6E-12 85.3 14.1 152 130-333 18-169 (211)
44 4gmo_A Putative uncharacterize 98.7 2E-08 6.9E-13 106.2 10.1 152 175-332 35-210 (684)
45 3ltj_A Alpharep-4; protein eng 98.7 1.6E-07 5.3E-12 82.7 14.3 151 129-331 12-162 (201)
46 4gmo_A Putative uncharacterize 98.7 8.7E-08 3E-12 101.3 12.8 167 136-309 39-229 (684)
47 1oyz_A Hypothetical protein YI 98.6 1.4E-06 4.8E-11 80.5 16.8 120 182-333 99-218 (280)
48 1oyz_A Hypothetical protein YI 98.6 1.8E-06 6.3E-11 79.7 17.1 144 146-333 104-247 (280)
49 3dad_A FH1/FH2 domain-containi 98.3 2.5E-05 8.5E-10 75.8 18.6 193 128-326 115-326 (339)
50 2qk2_A LP04448P; mini spindles 98.3 7.5E-06 2.6E-10 74.5 14.0 171 144-333 26-202 (242)
51 1b3u_A Protein (protein phosph 98.3 1.7E-05 5.7E-10 79.7 16.5 174 145-332 176-349 (588)
52 1te4_A Conserved protein MTH18 98.3 1.4E-07 4.7E-12 78.4 0.6 118 174-332 12-129 (131)
53 1b3u_A Protein (protein phosph 98.2 1.2E-05 4.2E-10 80.7 14.0 169 146-332 415-583 (588)
54 3qml_C Protein SLS1, nucleotid 98.2 4.7E-06 1.6E-10 79.8 9.9 137 147-289 42-189 (315)
55 4fdd_A Transportin-1; heat rep 98.2 3.2E-06 1.1E-10 90.4 9.4 171 150-332 338-508 (852)
56 2vgl_B AP-2 complex subunit be 98.2 3.2E-05 1.1E-09 79.9 16.3 160 112-289 29-189 (591)
57 2qk1_A Protein STU2; STU2P, XM 98.1 4E-05 1.4E-09 71.0 14.3 178 144-332 27-216 (249)
58 2vgl_B AP-2 complex subunit be 98.1 7.3E-05 2.5E-09 77.2 17.7 159 147-333 27-186 (591)
59 3b2a_A TON_1937, putative unch 98.1 0.00014 4.9E-09 67.4 17.2 180 132-332 34-214 (265)
60 4fdd_A Transportin-1; heat rep 98.0 2.1E-05 7.1E-10 84.1 12.2 176 145-332 268-467 (852)
61 1ibr_B P95, importin beta-1 su 98.0 7.8E-05 2.7E-09 72.4 13.3 201 130-333 127-354 (462)
62 1u6g_C TIP120 protein, CAND1; 97.9 0.00018 6.2E-09 79.8 16.6 188 133-333 8-201 (1230)
63 1te4_A Conserved protein MTH18 97.9 1.3E-05 4.3E-10 66.4 5.2 87 176-286 44-130 (131)
64 1u6g_C TIP120 protein, CAND1; 97.9 0.00076 2.6E-08 74.8 20.9 196 130-334 47-282 (1230)
65 1w63_A Adapter-related protein 97.8 0.0003 1E-08 73.2 15.8 174 132-332 71-259 (618)
66 1ibr_B P95, importin beta-1 su 97.8 4.5E-05 1.5E-09 74.1 8.9 194 129-332 33-242 (462)
67 1qgr_A Protein (importin beta 97.7 0.00025 8.6E-09 74.8 13.8 176 148-333 343-534 (876)
68 2qk2_A LP04448P; mini spindles 97.7 0.00044 1.5E-08 62.6 13.6 146 131-290 56-206 (242)
69 2bpt_A Importin beta-1 subunit 97.6 0.00015 5.3E-09 76.2 10.1 191 131-332 498-707 (861)
70 1w63_A Adapter-related protein 97.6 0.0002 6.9E-09 74.5 10.7 174 146-333 120-339 (618)
71 1qgr_A Protein (importin beta 97.6 0.0019 6.6E-08 68.0 17.8 194 130-332 171-391 (876)
72 2bpt_A Importin beta-1 subunit 97.5 0.0025 8.4E-08 67.0 17.6 199 131-342 179-401 (861)
73 2vgl_A Adaptor protein complex 97.4 0.0034 1.2E-07 65.4 17.1 163 143-332 48-212 (621)
74 3b2a_A TON_1937, putative unch 97.4 0.0036 1.2E-07 58.1 14.2 145 176-336 35-179 (265)
75 3tjz_B Coatomer subunit gamma; 97.3 0.013 4.3E-07 57.4 18.1 180 127-332 22-201 (355)
76 2qk1_A Protein STU2; STU2P, XM 97.2 0.0082 2.8E-07 55.3 15.0 175 112-290 32-221 (249)
77 4ffb_C Protein STU2; tubulin f 97.2 0.016 5.4E-07 53.6 17.0 177 145-332 21-208 (278)
78 2vgl_A Adaptor protein complex 97.0 0.017 5.8E-07 60.2 16.7 129 145-289 86-216 (621)
79 3dad_A FH1/FH2 domain-containi 96.9 0.017 5.9E-07 55.9 14.6 146 179-332 123-282 (339)
80 3eg5_B Protein diaphanous homo 96.7 0.12 4.3E-06 50.7 19.1 167 151-324 85-282 (383)
81 2of3_A ZYG-9; multifunctional 96.4 0.12 4.1E-06 48.5 15.9 166 146-332 59-232 (266)
82 2db0_A 253AA long hypothetical 96.0 0.18 6E-06 45.4 14.2 140 176-338 109-248 (253)
83 2db0_A 253AA long hypothetical 95.5 0.48 1.6E-05 42.6 15.1 185 131-347 32-217 (253)
84 2fv2_A RCD1 required for cell 95.3 0.35 1.2E-05 45.2 14.0 199 79-289 2-224 (268)
85 2iw3_A Elongation factor 3A; a 95.2 0.3 1E-05 53.6 15.3 185 130-333 132-321 (986)
86 3tjz_B Coatomer subunit gamma; 95.1 2.2 7.4E-05 41.5 19.7 157 112-289 43-205 (355)
87 1ho8_A Vacuolar ATP synthase s 94.7 0.062 2.1E-06 54.4 7.7 73 175-247 396-478 (480)
88 2f31_A Diaphanous protein homo 94.7 0.43 1.5E-05 43.3 12.7 157 163-325 33-217 (233)
89 1ho8_A Vacuolar ATP synthase s 94.6 0.019 6.3E-07 58.2 3.6 88 116-205 382-478 (480)
90 3gs3_A Symplekin, LD45768P; he 94.5 1.9 6.4E-05 40.1 16.7 133 146-291 28-175 (257)
91 2fv2_A RCD1 required for cell 94.4 0.78 2.7E-05 42.8 13.7 194 131-332 3-220 (268)
92 3ibv_A Exportin-T; karyopherin 94.3 0.86 3E-05 49.9 16.3 115 126-249 1-124 (980)
93 2iw3_A Elongation factor 3A; a 94.1 1.5 5.1E-05 48.2 17.6 152 151-319 70-225 (986)
94 2bnx_A Diaphanous protein homo 93.4 2.6 9.1E-05 41.1 16.4 157 163-325 37-221 (386)
95 4ady_A RPN2, 26S proteasome re 93.4 1.5 5E-05 48.1 15.6 106 128-250 574-681 (963)
96 4ady_A RPN2, 26S proteasome re 93.3 1.1 3.9E-05 48.9 14.6 101 217-332 612-715 (963)
97 3o2t_A Symplekin; heat repeat, 93.0 3.5 0.00012 40.5 16.4 147 130-291 24-185 (386)
98 1upk_A MO25 protein; transfera 92.5 4.9 0.00017 38.8 16.3 184 145-336 90-283 (341)
99 2x1g_F Cadmus; transport prote 92.4 1.7 5.7E-05 46.7 14.6 132 146-289 477-615 (971)
100 1wa5_C Importin alpha RE-expor 92.0 0.99 3.4E-05 48.7 12.2 176 146-332 418-624 (960)
101 1wa5_C Importin alpha RE-expor 91.6 3.7 0.00013 44.2 16.1 188 135-332 459-666 (960)
102 3ebb_A Phospholipase A2-activa 91.2 10 0.00035 35.8 19.5 208 103-328 75-298 (304)
103 4ffb_C Protein STU2; tubulin f 91.1 2.4 8.2E-05 38.6 12.2 138 144-290 66-213 (278)
104 2x19_B Importin-13; nuclear tr 91.0 1.5 5E-05 47.0 12.1 135 145-289 461-599 (963)
105 1x5b_A Signal transducing adap 90.9 0.95 3.2E-05 39.1 8.6 66 178-243 56-123 (163)
106 3u0r_A Apoptosis inhibitor 5; 90.6 2.2 7.4E-05 43.3 12.0 75 185-271 39-113 (507)
107 1mhq_A ADP-ribosylation factor 90.5 1.2 4.1E-05 37.9 8.7 71 176-246 40-117 (148)
108 1lsh_A Lipovitellin (LV-1N, LV 90.2 3.6 0.00012 45.3 14.5 166 101-289 319-507 (1056)
109 3ldz_A STAM-1, signal transduc 89.5 0.96 3.3E-05 38.0 7.3 68 176-243 44-112 (140)
110 4hat_C Exportin-1; heat repeat 89.3 1.2 4E-05 49.2 9.7 100 186-289 465-569 (1023)
111 1mhq_A ADP-ribosylation factor 88.4 1.1 3.7E-05 38.1 6.9 112 236-359 21-138 (148)
112 1juq_A ADP-ribosylation factor 88.4 1.5 5E-05 38.2 7.9 72 176-247 52-130 (171)
113 3ldz_A STAM-1, signal transduc 88.2 1.8 6.1E-05 36.3 8.0 97 235-342 24-120 (140)
114 1x5b_A Signal transducing adap 88.1 1.8 6.1E-05 37.3 8.2 95 236-341 35-130 (163)
115 1juq_A ADP-ribosylation factor 87.6 1.5 5.3E-05 38.0 7.5 130 218-359 14-150 (171)
116 3g2s_A C-terminal fragment of 86.9 4.2 0.00015 34.5 9.7 72 176-247 50-128 (149)
117 3qml_C Protein SLS1, nucleotid 85.4 5.3 0.00018 38.1 10.4 105 217-332 72-185 (315)
118 3gjx_A Exportin-1; transport, 84.9 24 0.00081 39.1 16.9 107 129-246 26-142 (1073)
119 2of3_A ZYG-9; multifunctional 84.8 4.6 0.00016 37.6 9.7 131 146-290 100-237 (266)
120 1elk_A Target of MYB1; superhe 84.6 3.5 0.00012 35.2 8.1 67 177-243 56-128 (157)
121 2x19_B Importin-13; nuclear tr 84.6 11 0.00039 40.0 14.0 143 131-289 24-175 (963)
122 3m1i_C Exportin-1; heat repeat 84.4 6.9 0.00024 42.6 12.4 101 186-290 465-570 (1049)
123 1lrv_A LRV, leucine-rich repea 84.3 0.36 1.2E-05 44.4 1.8 22 177-198 77-98 (244)
124 1lrv_A LRV, leucine-rich repea 84.0 0.38 1.3E-05 44.3 1.9 21 177-197 101-121 (244)
125 1dvp_A HRS, hepatocyte growth 82.4 3.8 0.00013 36.7 7.8 69 176-244 44-114 (220)
126 3zyq_A Hepatocyte growth facto 81.9 3.4 0.00011 37.4 7.3 70 176-245 47-118 (226)
127 3g2s_A C-terminal fragment of 81.7 8.1 0.00028 32.7 9.2 114 218-342 12-132 (149)
128 3m1i_C Exportin-1; heat repeat 81.7 15 0.0005 40.0 13.6 146 126-290 11-167 (1049)
129 4hat_C Exportin-1; heat repeat 81.2 20 0.00068 39.4 14.5 110 126-246 11-130 (1023)
130 3ebb_A Phospholipase A2-activa 79.4 21 0.00072 33.6 12.2 148 130-283 146-300 (304)
131 3u0r_A Apoptosis inhibitor 5; 79.3 38 0.0013 34.2 14.5 145 147-317 42-187 (507)
132 3zyq_A Hepatocyte growth facto 78.6 5.1 0.00017 36.2 7.3 115 217-342 8-124 (226)
133 2x1g_F Cadmus; transport prote 77.6 7.5 0.00026 41.6 9.5 143 131-290 7-158 (971)
134 3c2g_A SYS-1 protein; beta-cat 77.2 22 0.00076 35.0 11.5 181 150-332 260-469 (619)
135 1lsh_A Lipovitellin (LV-1N, LV 75.5 14 0.00047 40.7 11.0 138 129-285 389-539 (1056)
136 1elk_A Target of MYB1; superhe 74.3 9.7 0.00033 32.3 7.6 93 236-338 36-132 (157)
137 3a6p_A Exportin-5; exportin-5, 73.5 43 0.0015 37.3 14.5 105 133-246 13-126 (1204)
138 3ibv_A Exportin-T; karyopherin 70.8 14 0.00047 40.4 9.5 94 147-249 457-570 (980)
139 2bnx_A Diaphanous protein homo 68.6 74 0.0025 30.7 13.4 111 215-332 46-180 (386)
140 1dvp_A HRS, hepatocyte growth 66.7 7.1 0.00024 34.9 5.2 92 236-338 25-117 (220)
141 3gae_A Protein DOA1; UFD3, CDC 66.3 28 0.00094 31.8 9.3 165 104-289 34-217 (253)
142 3eg5_B Protein diaphanous homo 65.7 99 0.0034 29.8 15.6 122 148-270 135-276 (383)
143 3oc3_A Helicase MOT1, MOT1; re 63.8 64 0.0022 33.8 12.0 158 148-332 243-400 (800)
144 2f31_A Diaphanous protein homo 62.2 85 0.0029 27.8 15.3 119 148-266 69-207 (233)
145 4atg_A TAF6; transcription, TF 62.1 83 0.0029 27.7 12.7 121 114-243 10-160 (196)
146 2xpp_A IWS1, ECU08_0440; trans 59.7 34 0.0012 28.8 7.9 120 105-237 1-128 (145)
147 3l9t_A Putative uncharacterize 59.0 93 0.0032 28.4 11.2 119 147-289 85-207 (240)
148 2rg8_A Programmed cell death p 53.4 77 0.0026 26.9 9.3 96 103-204 2-116 (165)
149 1sz9_A PCF11 protein; RNA poly 53.1 78 0.0027 26.2 9.1 91 185-287 22-112 (144)
150 3rru_A TOM1L1 protein; structu 50.6 37 0.0013 28.6 6.7 72 177-248 56-133 (152)
151 3pst_A Protein DOA1; protein d 49.4 2E+02 0.007 28.3 13.2 129 149-289 242-389 (425)
152 3gjx_A Exportin-1; transport, 48.2 55 0.0019 36.2 9.2 96 186-289 491-595 (1073)
153 3l3f_X Protein DOA1, DOA1/UFD3 46.4 2.1E+02 0.0071 27.6 12.7 128 150-289 180-326 (362)
154 3hjl_A Flagellar motor switch 45.4 1.4E+02 0.0049 28.3 10.6 121 205-332 129-283 (329)
155 2xpp_A IWS1, ECU08_0440; trans 38.9 1.3E+02 0.0045 25.1 8.2 81 205-289 50-136 (145)
156 4flb_A Regulation of nuclear P 38.7 37 0.0013 27.4 4.7 62 176-247 10-71 (132)
157 1vsy_5 Proteasome activator BL 37.9 62 0.0021 35.5 7.6 161 120-289 785-966 (997)
158 1j3e_A SEQA protein; protein-D 35.4 34 0.0012 27.7 3.8 85 7-128 20-105 (115)
159 3oc3_A Helicase MOT1, MOT1; re 35.3 25 0.00085 36.8 3.6 125 147-288 277-403 (800)
160 1upk_A MO25 protein; transfera 34.8 3.1E+02 0.011 26.2 15.1 166 155-324 145-320 (341)
161 3sk7_A Protein SEQA; sequestra 30.9 26 0.0009 28.5 2.4 84 7-128 22-106 (116)
162 1n4k_A Inositol 1,4,5-trisphos 28.7 3.9E+02 0.013 25.5 11.5 111 131-248 228-380 (381)
163 3a6p_A Exportin-5; exportin-5, 27.8 5.9E+02 0.02 28.0 13.5 127 186-332 25-158 (1204)
164 1lrr_A SEQA protein; protein-D 27.4 43 0.0015 27.7 3.2 85 7-128 36-121 (131)
165 3nfq_A Transcription factor IW 25.9 3.2E+02 0.011 23.5 8.8 81 205-289 65-151 (170)
166 3fmt_A Protein SEQA; protein-D 24.0 51 0.0017 28.3 3.1 85 7-128 67-152 (162)
167 4fu3_A Regulation of nuclear P 23.8 95 0.0033 24.8 4.7 60 178-247 11-70 (135)
168 3l9t_A Putative uncharacterize 23.8 4.1E+02 0.014 24.0 14.6 135 181-346 78-214 (240)
169 2ccq_A P97, peptide N-glycanas 22.1 89 0.0031 24.3 4.0 43 179-221 6-65 (99)
170 3rru_A TOM1L1 protein; structu 21.1 71 0.0024 26.8 3.5 97 236-342 36-136 (152)
171 3eiq_C Programmed cell death p 20.1 2.9E+02 0.0099 26.4 8.0 99 102-204 45-160 (358)
No 1
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=100.00 E-value=3.7e-37 Score=296.70 Aligned_cols=213 Identities=25% Similarity=0.315 Sum_probs=193.6
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHhhcC----------CCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHH-hc
Q 017926 115 MEIKELMEKLKTPSDAQLIQIAIDDLNNS----------TLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVG-QL 183 (363)
Q Consensus 115 ~~Lkeal~~l~~~~d~~lmk~al~~L~~~----------~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~-lL 183 (363)
.||.++|+ ++||++++||+++.+|.++ +.+.+.|+.|++.|.++++++|||++|++.||+++|+. +|
T Consensus 14 ~~~~~~~~--~~~d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL 91 (296)
T 1xqr_A 14 VPRGSHMR--GQRGEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYL 91 (296)
T ss_dssp ------CC--SCHHHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTT
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHH
Confidence 46777765 4589999999999999997 45668999999999999999999999999999999999 99
Q ss_pred CCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCC-CHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHH
Q 017926 184 NHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSS-FVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLM 262 (363)
Q Consensus 184 ~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~-~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~ 262 (363)
+++++++|..|+|+||++++|||.+|+.+++.|++|+|+++|+++ +..++.+|+||||+++|+++++++.|.+.||++.
T Consensus 92 ~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~ 171 (296)
T 1xqr_A 92 EAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSV 171 (296)
T ss_dssp TCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHH
Confidence 999999999999999999999999999999999999999999964 6889999999999999999999999999999999
Q ss_pred HHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcc
Q 017926 263 LQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGL 336 (363)
Q Consensus 263 L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~ 336 (363)
|+.+|+++ +.++|++|+|+|++|+. .+++.+..+++.|+++.|+.+|.++|.+++++++.+|..+..
T Consensus 172 L~~lL~~~--d~~v~~~A~~aLs~L~~-----~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~ 238 (296)
T 1xqr_A 172 LMRAMQQQ--VQKLKVKSAFLLQNLLV-----GHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVT 238 (296)
T ss_dssp HHHHHHSS--CHHHHHHHHHHHHHHHH-----HCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHT
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHh-----CChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHh
Confidence 99999986 78899999999999996 367788999999999999999999999999999999984443
No 2
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.87 E-value=4.1e-21 Score=171.11 Aligned_cols=180 Identities=16% Similarity=0.217 Sum_probs=166.9
Q ss_pred CHHHHHHHHHHHHHcc-cCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHh
Q 017926 146 SLEDSQRALQELLILV-EPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKM 224 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lv-e~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~L 224 (363)
+.+.+..|+..|..+. .+.++...+.+.|+++.|+.+|+++++++|..|+|+|++++.+++..+..+++.|++|.|+++
T Consensus 25 ~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~l 104 (210)
T 4db6_A 25 DQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQL 104 (210)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHH
Confidence 5788888999999988 455777889999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHH
Q 017926 225 VKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFR 304 (363)
Q Consensus 225 L~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~ 304 (363)
|++++..++..|+++|++++.+++.....+.+.|+++.|+.+|+++ +..++..|+++|.+|+. .++..+..+.
T Consensus 105 L~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~aL~~l~~-----~~~~~~~~~~ 177 (210)
T 4db6_A 105 LSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS-----GGNEQKQAVK 177 (210)
T ss_dssp TTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHT-----SCHHHHHHHH
T ss_pred HcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHHHHHHHHc-----CCcHHHHHHH
Confidence 9999999999999999999999888888999999999999999986 67899999999999995 3466778889
Q ss_pred hCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 305 DRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 305 ~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
+.|+++.|+.++.+++.+++++|+.+|.
T Consensus 178 ~~g~i~~L~~ll~~~~~~v~~~a~~aL~ 205 (210)
T 4db6_A 178 EAGALEKLEQLQSHENEKIQKEAQEALE 205 (210)
T ss_dssp HTTHHHHHHHGGGCSCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999987
No 3
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.86 E-value=4.9e-20 Score=166.84 Aligned_cols=192 Identities=17% Similarity=0.207 Sum_probs=174.6
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCC-chhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPID-NANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQ 211 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iD-nAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~ 211 (363)
++..++.+.+++ .+.+..|+..|..++...+ +...+.+.|++++|+.+|+++++++|..|+++|++++.+++..+..
T Consensus 4 i~~L~~~L~~~~--~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 81 (252)
T 4hxt_A 4 VEKLVKLLTSTD--SETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 81 (252)
T ss_dssp HHHHHHHTTCSC--HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
Confidence 455667776653 7888999999999987764 8889999999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhh
Q 017926 212 VLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQ 291 (363)
Q Consensus 212 ~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~ 291 (363)
+.+.|++|.|++++++++..++..|+++|++++.+++.....+.+.|+++.|+.+++++ +..++..++++|.+|+.
T Consensus 82 ~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~--~~~~~~~a~~~L~~l~~-- 157 (252)
T 4hxt_A 82 IVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIAS-- 157 (252)
T ss_dssp HHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTT--
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHc--
Confidence 99999999999999999999999999999999998899999999999999999999987 57799999999999995
Q ss_pred hhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 292 LENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 292 ~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
.++.....+.+.|+++.|+.+|.+++..+++.++.+|..
T Consensus 158 ---~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~ 196 (252)
T 4hxt_A 158 ---GPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALAN 196 (252)
T ss_dssp ---SCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 345556788899999999999999999999999999984
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.84 E-value=9.9e-20 Score=164.82 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=175.6
Q ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHcccC-CCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHH
Q 017926 132 LIQIAIDDLNNSTLSLEDSQRALQELLILVEP-IDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 132 lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~-iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
.++..++.+.++ +.+.+..++..|..+... .++...+.+.|++++|+.+|+++++++|..|+++|++++..++..+.
T Consensus 45 ~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~ 122 (252)
T 4hxt_A 45 GVEVLVKLLTST--DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK 122 (252)
T ss_dssp HHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CHHHHHHHHhCC--CHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 355566667654 478899999999999987 67888999999999999999999999999999999999999999999
Q ss_pred HHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 211 QVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.+.+.|++|.|++++++++..++..|+++|++++.+++.....+.+.|+++.|+.++.++ +..+|..|+++|.+|+.
T Consensus 123 ~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~- 199 (252)
T 4hxt_A 123 AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIAS- 199 (252)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTT-
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCC--CHHHHHHHHHHHHHHHc-
Confidence 999999999999999999999999999999999999888888999999999999999976 57899999999999995
Q ss_pred hhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 291 QLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 291 ~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
.++.....+.+.|+++.|++++.+++.++++.|+.+|..
T Consensus 200 ----~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~ 238 (252)
T 4hxt_A 200 ----GPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALEN 238 (252)
T ss_dssp ----SBHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 356677888999999999999999999999999999983
No 5
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.84 E-value=8.3e-20 Score=166.85 Aligned_cols=192 Identities=16% Similarity=0.192 Sum_probs=174.3
Q ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHccc-CCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHH
Q 017926 132 LIQIAIDDLNNSTLSLEDSQRALQELLILVE-PIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 132 lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve-~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
.+...++.+.+++ .+.+..|+..|..++. +.++...+.+.|++++|+.+|+++++.+|..|+|+|++++.+++..+.
T Consensus 55 ~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (252)
T 4db8_A 55 ALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (252)
T ss_dssp HHHHHHHGGGCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cHHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHH
Confidence 4566777777653 7889999999999997 567888999999999999999999999999999999999998887768
Q ss_pred HHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 211 QVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.+++.|++|.|+++|++++..++..|+++|++++.+++.....+.+.|+++.|+.+|+++ +..++..|+++|.+|+.
T Consensus 133 ~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~- 209 (252)
T 4db8_A 133 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS- 209 (252)
T ss_dssp HHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCS--SHHHHHHHHHHHHHHTT-
T ss_pred HHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCC--CHHHHHHHHHHHHHHhc-
Confidence 899999999999999999999999999999999999888888999999999999999987 67899999999999995
Q ss_pred hhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 291 QLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 291 ~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.++.....+.+.|+++.|+.++.++++++++.|+.+|.
T Consensus 210 ----~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~A~~~L~ 247 (252)
T 4db8_A 210 ----GGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALE 247 (252)
T ss_dssp ----SCHHHHHHHHHTTHHHHHHTTTTCSSSHHHHTHHHHHH
T ss_pred ----CCHHHHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45667788899999999999999999999999999988
No 6
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.83 E-value=1.4e-19 Score=165.26 Aligned_cols=179 Identities=16% Similarity=0.227 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHHHcc-cCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 147 LEDSQRALQELLILV-EPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lv-e~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
.+.+..|+..|..++ .+.++...+.+.|++++|+.+|+++++++|..|+++|++++..++..+..+++.|++|.|+++|
T Consensus 26 ~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL 105 (252)
T 4db8_A 26 MQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 105 (252)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHH
Confidence 355667777774433 3445667888999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD 305 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~ 305 (363)
++++..++..|+++|+++..+.+.....+.+.|+++.|+.+|+++ +..++..|+++|.+|+. .++.....+.+
T Consensus 106 ~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~-----~~~~~~~~~~~ 178 (252)
T 4db8_A 106 SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS-----GGNEQIQAVID 178 (252)
T ss_dssp GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTT-----SCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHc-----CChHHHHHHHH
Confidence 999999999999999999998776658899999999999999986 67899999999999995 34566777889
Q ss_pred CCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 306 RFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 306 ~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.|+++.|+++|.++++.+++.++.+|.
T Consensus 179 ~~~i~~L~~ll~~~~~~v~~~a~~~L~ 205 (252)
T 4db8_A 179 AGALPALVQLLSSPNEQILQEALWALS 205 (252)
T ss_dssp TTCHHHHHHGGGCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999998
No 7
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.81 E-value=8.5e-19 Score=156.06 Aligned_cols=157 Identities=17% Similarity=0.165 Sum_probs=142.7
Q ss_pred HHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcc
Q 017926 170 LSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLA 249 (363)
Q Consensus 170 l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~ 249 (363)
...-|+.++|+.+|+++++++|..|+|+|++++..++..+..+++.|++|.|+++|++++..++..|+++|++++.+++.
T Consensus 8 ~~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~ 87 (210)
T 4db6_A 8 HHHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 87 (210)
T ss_dssp -----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred ccccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHH
Q 017926 250 GQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFL 329 (363)
Q Consensus 250 a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~ 329 (363)
....+++.||++.|+.+|+++ +..+|..|+++|.+|+. .++.....+.+.|+++.|+++|++++..+++.++.
T Consensus 88 ~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~-----~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~ 160 (210)
T 4db6_A 88 QIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS-----GGNEQIQAVIDAGALPALVQLLSSPNEQILQEALW 160 (210)
T ss_dssp HHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTT-----SCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCC--cHHHHHHHHHHHHHHHc-----CCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999999999999987 67899999999999995 35566677889999999999999999999999999
Q ss_pred HHHh
Q 017926 330 EHVF 333 (363)
Q Consensus 330 aL~~ 333 (363)
+|..
T Consensus 161 aL~~ 164 (210)
T 4db6_A 161 ALSN 164 (210)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 8
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.80 E-value=9.8e-19 Score=172.01 Aligned_cols=207 Identities=13% Similarity=0.029 Sum_probs=170.4
Q ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHcccC--CCchhhHHhcCCHHHHHHhc-CCCCHHHHHHHHHHHHHHhccChHHHHH
Q 017926 135 IAIDDLNNSTLSLEDSQRALQELLILVEP--IDNANDLSKLGGLSVLVGQL-NHPDTDIRKISAWILGKASQNNPLVQKQ 211 (363)
Q Consensus 135 ~al~~L~~~~~s~e~k~~AL~~L~~Lve~--iDnAn~l~~lGgl~~Li~lL-~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~ 211 (363)
..+..|.. .+.+.+..|...|..|... .+|...+.+.||+|+|+++| ++.+++++..|+++|.+++..++..+..
T Consensus 131 ~LV~LL~s--~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~ 208 (354)
T 3nmw_A 131 ALVAQLKS--ESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKAD 208 (354)
T ss_dssp HHHHGGGC--SCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHCC--CCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHH
Confidence 34444543 3678888888888888764 45778889999999999975 6788999999999999999878888888
Q ss_pred HH-HcCcHHHHHHhhcCCCH----HHHHHHHHHHHHHhc---CCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHH
Q 017926 212 VL-ELGALSKLMKMVKSSFV----EEAVKALYTVSSLIR---NNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSL 283 (363)
Q Consensus 212 ~l-e~G~lp~Ll~LL~s~~~----~v~~kAL~ALSsLiR---~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~l 283 (363)
+. ..|++|.|+++|.++++ +++..|.++|+++.. +++.++..+.+.||++.|+.+|++. +..++..|+++
T Consensus 209 i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~A~~a 286 (354)
T 3nmw_A 209 ICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH--SLTIVSNACGT 286 (354)
T ss_dssp HHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCS--CHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCC--ChHHHHHHHHH
Confidence 87 78999999999997654 578889999988886 6788899999999999999999986 56799999999
Q ss_pred HHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcccccCchhhhhHHHHHHh
Q 017926 284 VGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGLVFCTCPCIVRGAVIVAE 353 (363)
Q Consensus 284 L~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~~~~~~~~~~r~~~l~~~ 353 (363)
|.+|+. .+++.+..+.+.|+++.|+++|++++..+++.|+.||. .+....+.+|+...|++.
T Consensus 287 L~nLa~-----~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~---nL~~~~~~~~~~~~~~~~ 348 (354)
T 3nmw_A 287 LWNLSA-----RNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALR---NLMANRPAKYKDANIMSP 348 (354)
T ss_dssp HHHHTS-----SCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHH---HHHTTCCGGGC-------
T ss_pred HHHHhC-----CCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHH---HHHcCCHHHHhhhcccCC
Confidence 999985 36677889999999999999999999999999999998 445556888887777653
No 9
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.78 E-value=2.3e-17 Score=168.34 Aligned_cols=194 Identities=16% Similarity=0.231 Sum_probs=166.6
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCc--hhhHHhcCCHHHHHHhcCC-CCHHHHHHHHHHHHHHhccChHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDN--ANDLSKLGGLSVLVGQLNH-PDTDIRKISAWILGKASQNNPLVQ 209 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDn--An~l~~lGgl~~Li~lL~s-~~~~Ir~~Aa~~Lgt~aqNNp~~Q 209 (363)
+.+.++.++.. +++.+..|...+..++...+| .+.+++.|++|+|+++|++ +++++|..|||+|++++..+++.+
T Consensus 59 i~~~v~~l~s~--d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~ 136 (510)
T 3ul1_B 59 VEDIVKGINSN--NLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQT 136 (510)
T ss_dssp HHHHHHHHTSS--CHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHH
Confidence 55666767543 678899999999988765544 5789999999999999974 578999999999999999999999
Q ss_pred HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCc---cHHHHHHHHHHHHH
Q 017926 210 KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSF---EIRLHRKAVSLVGD 286 (363)
Q Consensus 210 ~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~---~~klr~kA~~lL~~ 286 (363)
+.+++.|++|.|+++|++++..++..|++||++|+.+++..+..+.+.||++.|+.+|.++.. ...+++.+++.+++
T Consensus 137 ~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~n 216 (510)
T 3ul1_B 137 KAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSN 216 (510)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987532 34578899999999
Q ss_pred HhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 287 LAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 287 L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
++.. ...........++++.|+.+|.+++.+++..++.+|..
T Consensus 217 l~~~-----~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~ 258 (510)
T 3ul1_B 217 LCRN-----KNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISY 258 (510)
T ss_dssp HHCC-----CSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred Hhhc-----ccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 9962 33334444456899999999999999999999999883
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.77 E-value=9.2e-18 Score=169.26 Aligned_cols=191 Identities=13% Similarity=0.098 Sum_probs=163.0
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchh-hHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNAN-DLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQ 211 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn-~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~ 211 (363)
+...+..|..+ +++.+..|...|..++...++.. .+.+.||+|+|+.+|++++++++..|+|+|++++..|+..+..
T Consensus 4 l~~lv~~L~s~--~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~ 81 (457)
T 1xm9_A 4 IPKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 81 (457)
T ss_dssp HHHHHHHHHSS--CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHHHCCC--CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 34456666654 45788999999999887666655 9999999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHhhc-CCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhc--------CCC------ccHHH
Q 017926 212 VLELGALSKLMKMVK-SSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILG--------NSS------FEIRL 276 (363)
Q Consensus 212 ~le~G~lp~Ll~LL~-s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~--------s~~------~~~kl 276 (363)
+++.|++|.|+++|. +++..++..|+++|++|..+ +.....+.+ ||++.|+.+|. ++. .+..+
T Consensus 82 i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v 159 (457)
T 1xm9_A 82 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHH
T ss_pred HHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHH
Confidence 999999999999999 77889999999999999988 778888889 99999999993 221 24567
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCcchhHHhC-CcHHHHHHhccC------CChhHHHHHHHHHHh
Q 017926 277 HRKAVSLVGDLAKCQLENMHKVEPPLFRDR-FFLKSVVDLTAS------ADLDLQEKVFLEHVF 333 (363)
Q Consensus 277 r~kA~~lL~~L~~~~~~~~~~~~~~~l~~~-g~v~~Lv~lL~~------~d~~lqE~al~aL~~ 333 (363)
++.|+|+|.+|+. +++.+..+.+. |+++.|+.+|++ .+..++|+++.+|..
T Consensus 160 ~~~a~~aL~nLs~------~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~n 217 (457)
T 1xm9_A 160 FFNATGCLRNLSS------ADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHN 217 (457)
T ss_dssp HHHHHHHHHHHTT------SHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc------CHHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHh
Confidence 7899999999995 36678888887 999999999985 466788888888774
No 11
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.76 E-value=2.4e-17 Score=162.14 Aligned_cols=187 Identities=16% Similarity=0.140 Sum_probs=158.2
Q ss_pred CHHHHHHHHHHHHHcccCCC-chhhHHhcCC-HHHHHHhcCCCCHHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHHH
Q 017926 146 SLEDSQRALQELLILVEPID-NANDLSKLGG-LSVLVGQLNHPDTDIRKISAWILGKASQN-NPLVQKQVLELGALSKLM 222 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iD-nAn~l~~lGg-l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqN-Np~~Q~~~le~G~lp~Ll 222 (363)
+++-+..|...|..++...+ +...+...|| +|+|+.+|.++++++|..|+|+|++++.+ |+..+..+.+.|++|.|+
T Consensus 97 ~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv 176 (354)
T 3nmw_A 97 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 176 (354)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHH
Confidence 35668889999999987765 4445556777 99999999999999999999999999985 888999999999999999
Q ss_pred Hhh-cCCCHHHHHHHHHHHHHHhcCCcccHHHHH-hcCcHHHHHHhhcCCCcc--HHHHHHHHHHHHHHhhhhhhcCCCC
Q 017926 223 KMV-KSSFVEEAVKALYTVSSLIRNNLAGQEMFY-VEAGDLMLQDILGNSSFE--IRLHRKAVSLVGDLAKCQLENMHKV 298 (363)
Q Consensus 223 ~LL-~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~-~~gG~~~L~~lL~s~~~~--~klr~kA~~lL~~L~~~~~~~~~~~ 298 (363)
++| ++++..++..|+.+|.+|..+++.++..+. ..||++.|+.+|++++.. ..++..|+++|.+|+... ..+++
T Consensus 177 ~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~--a~~~~ 254 (354)
T 3nmw_A 177 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLI--ATNED 254 (354)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhc--cCCHH
Confidence 975 566788899999999999887777777887 689999999999876322 258999999999998521 02556
Q ss_pred cchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhh
Q 017926 299 EPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFC 334 (363)
Q Consensus 299 ~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~ 334 (363)
.+..+.+.|+++.|+++|++++..+++.|+.+|..+
T Consensus 255 ~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL 290 (354)
T 3nmw_A 255 HRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNL 290 (354)
T ss_dssp HHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 788899999999999999999999999999999943
No 12
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.76 E-value=8.5e-18 Score=170.72 Aligned_cols=201 Identities=12% Similarity=0.021 Sum_probs=168.6
Q ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHcccC--CCchhhHHhcCCHHHHHHhc-CCCCHHHHHHHHHHHHHHhccChHHHH
Q 017926 134 QIAIDDLNNSTLSLEDSQRALQELLILVEP--IDNANDLSKLGGLSVLVGQL-NHPDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 134 k~al~~L~~~~~s~e~k~~AL~~L~~Lve~--iDnAn~l~~lGgl~~Li~lL-~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
...+..|.. .+.+.+..|...|..|... .+|...+...||+++|+++| .+.+++++..|+.+|++++..++..+.
T Consensus 246 p~LV~LL~s--~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~ 323 (458)
T 3nmz_A 246 RALVAQLKS--ESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA 323 (458)
T ss_dssp HHHHHGGGC--SCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHhC--CCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 334444543 3678888999999998764 35667888999999999974 677899999999999999987778888
Q ss_pred HHH-HcCcHHHHHHhhcCCCH----HHHHHHHHHHHHHhc---CCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHH
Q 017926 211 QVL-ELGALSKLMKMVKSSFV----EEAVKALYTVSSLIR---NNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVS 282 (363)
Q Consensus 211 ~~l-e~G~lp~Ll~LL~s~~~----~v~~kAL~ALSsLiR---~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~ 282 (363)
.+. ..|++|.|+++|.+.++ +++..|.++|+++.. +++.+...+.+.||++.|+.+|++. +..++..|++
T Consensus 324 ~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~--~~~v~~~A~~ 401 (458)
T 3nmz_A 324 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH--SLTIVSNACG 401 (458)
T ss_dssp HHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCS--CHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCC--ChHHHHHHHH
Confidence 887 78999999999997654 478889999998886 6888899999999999999999986 5679999999
Q ss_pred HHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcccccCchhhhh
Q 017926 283 LVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGLVFCTCPCIVR 346 (363)
Q Consensus 283 lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~~~~~~~~~~r 346 (363)
+|.+|+. .+++.+..+.+.|+++.|+++|.+++..+++.|+.||. .+....|.+||
T Consensus 402 aL~nLa~-----~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~---nL~~~~p~ky~ 457 (458)
T 3nmz_A 402 TLWNLSA-----RNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALR---NLMANRPAKYK 457 (458)
T ss_dssp HHHHHHS-----SCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHH---HHHTCCSCC--
T ss_pred HHHHHHc-----CCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHH---HHHcCCHhhhc
Confidence 9999995 36678889999999999999999999999999999998 44444577776
No 13
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.75 E-value=4.6e-17 Score=166.45 Aligned_cols=182 Identities=12% Similarity=0.102 Sum_probs=166.3
Q ss_pred CCHHHHHHHHHHHHHcccCCC-chhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 017926 145 LSLEDSQRALQELLILVEPID-NANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMK 223 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~iD-nAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~ 223 (363)
.+.+.+..|+..|.++.+..+ +...+...|+++.|+.+|.++++.++..|+++|++++..++..+..+++.|+++.|+.
T Consensus 263 ~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~ 342 (529)
T 3tpo_A 263 NDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPS 342 (529)
T ss_dssp SCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHH
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHH
Confidence 366888899999999988764 4456778899999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhH
Q 017926 224 MVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLF 303 (363)
Q Consensus 224 LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l 303 (363)
+|.+++..++..|+|+|++|+.+++.....+++.|+++.|+.+|.+. +..+|..|+|+|.+|+.. .+++....+
T Consensus 343 LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~--~~~v~~~A~~aL~nl~~~----~~~~~~~~l 416 (529)
T 3tpo_A 343 LLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKA--DFKTQKAAAWAITNYTSG----GTVEQIVYL 416 (529)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSS--CHHHHHHHHHHHHHHHHH----SCHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCC--CHHHHHHHHHHHHHHHcC----CCHHHHHHH
Confidence 99999999999999999999999998889999999999999999987 677999999999999963 455677889
Q ss_pred HhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 304 RDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 304 ~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
++.|+++.|+++|.+.|.+++..++.+|.
T Consensus 417 ~~~g~i~~L~~LL~~~d~~i~~~~L~aL~ 445 (529)
T 3tpo_A 417 VHCGIIEPLMNLLSAKDTKIIQVILDAIS 445 (529)
T ss_dssp HHTTCHHHHHHGGGCSCHHHHHHHHHHHH
T ss_pred HHCcCHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999987
No 14
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.74 E-value=1.5e-16 Score=162.59 Aligned_cols=194 Identities=16% Similarity=0.215 Sum_probs=165.3
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCC--chhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhccChHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPID--NANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQNNPLVQ 209 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iD--nAn~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNNp~~Q 209 (363)
+++.++.+.. .+++.+..|+..+..++..-. ....+++.|++|+|+.+|. ++++.++..|+|+|++++.+++...
T Consensus 78 l~~lv~~l~s--~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~ 155 (529)
T 3tpo_A 78 VEDIVKGINS--NNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQT 155 (529)
T ss_dssp HHHHHHHHTS--SCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHhcC--CCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHH
Confidence 4555666654 367888899999988775443 3578999999999999996 5679999999999999999999999
Q ss_pred HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCc---cHHHHHHHHHHHHH
Q 017926 210 KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSF---EIRLHRKAVSLVGD 286 (363)
Q Consensus 210 ~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~---~~klr~kA~~lL~~ 286 (363)
..+++.|++|.|+.+|.+++..++..|++||++|+.+++..+..+.+.||++.|+.+|..+.. ...+++.+++.+++
T Consensus 156 ~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~n 235 (529)
T 3tpo_A 156 KAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSN 235 (529)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999986532 34578899999999
Q ss_pred HhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 287 LAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 287 L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
++.. ...........++++.|+.+|.+++.+++..++.+|..
T Consensus 236 l~~~-----~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~ 277 (529)
T 3tpo_A 236 LCRN-----KNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISY 277 (529)
T ss_dssp HHCC-----CTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHhc-----ccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9962 33334444557899999999999999999999999873
No 15
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.73 E-value=6.2e-17 Score=165.10 Aligned_cols=182 Identities=12% Similarity=0.105 Sum_probs=165.7
Q ss_pred CCHHHHHHHHHHHHHcccCCC-chhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHH
Q 017926 145 LSLEDSQRALQELLILVEPID-NANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMK 223 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~iD-nAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~ 223 (363)
.+.+.+..|+..|.++++..+ +...+...|+++.|+.+|.+++..++..|+++|++++..++..+..+++.|+++.|+.
T Consensus 244 ~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~ 323 (510)
T 3ul1_B 244 NDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPS 323 (510)
T ss_dssp SCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-
T ss_pred CCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHH
Confidence 467888899999999988764 3456678899999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhH
Q 017926 224 MVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLF 303 (363)
Q Consensus 224 LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l 303 (363)
+|++++..++..|+|+|++|+.+++.....+.+.|+++.|+.++++. +..+|..|+|+|.+|+.. .+.+.+..+
T Consensus 324 LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~--~~~v~~~Aa~aL~Nl~~~----~~~~~~~~L 397 (510)
T 3ul1_B 324 LLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKA--DFKTQKEAAWAITNYTSG----GTVEQIVYL 397 (510)
T ss_dssp CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSS--CHHHHHHHHHHHHHHHHH----CCHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHcc----CCHHHHHHH
Confidence 99999999999999999999999999899999999999999999987 678999999999999973 456677889
Q ss_pred HhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 304 RDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 304 ~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
++.|+++.|+++|...|.+++..++.+|.
T Consensus 398 ~~~g~i~~L~~LL~~~d~~i~~~~L~aL~ 426 (510)
T 3ul1_B 398 VHCGIIEPLMNLLSAKDTKIIQVILDAIS 426 (510)
T ss_dssp HHTTCHHHHHHGGGCSCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999986
No 16
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.73 E-value=6.5e-17 Score=164.23 Aligned_cols=187 Identities=16% Similarity=0.137 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHcccCCC-chhhHHhcCC-HHHHHHhcCCCCHHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHHHH
Q 017926 147 LEDSQRALQELLILVEPID-NANDLSKLGG-LSVLVGQLNHPDTDIRKISAWILGKASQN-NPLVQKQVLELGALSKLMK 223 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lve~iD-nAn~l~~lGg-l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqN-Np~~Q~~~le~G~lp~Ll~ 223 (363)
++-+..|...|..++.+.+ +...+...+| +|+|+.+|.+++++++..|+|+|++++.+ ++..+..+.+.|++|+|++
T Consensus 214 ~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~ 293 (458)
T 3nmz_A 214 ITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME 293 (458)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHH
Confidence 4557788889999887765 3444556677 99999999999999999999999999985 7889999999999999999
Q ss_pred hh-cCCCHHHHHHHHHHHHHHhcCCcccHHHHH-hcCcHHHHHHhhcCCCcc--HHHHHHHHHHHHHHhhhhhhcCCCCc
Q 017926 224 MV-KSSFVEEAVKALYTVSSLIRNNLAGQEMFY-VEAGDLMLQDILGNSSFE--IRLHRKAVSLVGDLAKCQLENMHKVE 299 (363)
Q Consensus 224 LL-~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~-~~gG~~~L~~lL~s~~~~--~klr~kA~~lL~~L~~~~~~~~~~~~ 299 (363)
+| .+++..++..|+.||.+|..+++.++..+. ..||++.|+.+|.+++.. ..++..|+++|.+|+... ..+++.
T Consensus 294 lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~--a~~~~~ 371 (458)
T 3nmz_A 294 CALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLI--ATNEDH 371 (458)
T ss_dssp HHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcc--cCCHHH
Confidence 75 556778888999999999886667777887 689999999999876322 258999999999998521 025567
Q ss_pred chhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhc
Q 017926 300 PPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCG 335 (363)
Q Consensus 300 ~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~ 335 (363)
+..+.+.|+++.|+.+|++++.++++.|+.+|+.++
T Consensus 372 ~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa 407 (458)
T 3nmz_A 372 RQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLS 407 (458)
T ss_dssp HHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999433
No 17
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.73 E-value=4.8e-17 Score=151.50 Aligned_cols=193 Identities=12% Similarity=0.098 Sum_probs=155.8
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHccc-CCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVE-PIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQ 211 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve-~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~ 211 (363)
+..+++.|..++...+.+..|...|..++. +.++-..+...||+|+|+++|.++++++|..|+|+|.+++..|++.+..
T Consensus 10 i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~ 89 (233)
T 3tt9_A 10 LERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLE 89 (233)
T ss_dssp HHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 445566666655445667777788888774 5567788999999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHhhc-CCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcC--------------CCccHHH
Q 017926 212 VLELGALSKLMKMVK-SSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGN--------------SSFEIRL 276 (363)
Q Consensus 212 ~le~G~lp~Ll~LL~-s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s--------------~~~~~kl 276 (363)
+.+.|+||+|+++|. +.+.+++..|..+|-++.. ++.....+.+ +|++.|+.++.. ...+..+
T Consensus 90 I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~-~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v 167 (233)
T 3tt9_A 90 VAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSS-NDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFDI 167 (233)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT-SGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHH
T ss_pred HHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHc-ChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchHHH
Confidence 999999999999998 4677888877767776654 3556666665 589999886530 1135689
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCcchhHHhC-CcHHHHHHhccCC------ChhHHHHHHHHHH
Q 017926 277 HRKAVSLVGDLAKCQLENMHKVEPPLFRDR-FFLKSVVDLTASA------DLDLQEKVFLEHV 332 (363)
Q Consensus 277 r~kA~~lL~~L~~~~~~~~~~~~~~~l~~~-g~v~~Lv~lL~~~------d~~lqE~al~aL~ 332 (363)
+.+|+..|.+|+. .+++.+..+.+. |+|+.|+.+++.. +...+|.+..+|.
T Consensus 168 ~~na~~~L~nLss-----~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~ 225 (233)
T 3tt9_A 168 FYNVTGCLRNMSS-----AGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILH 225 (233)
T ss_dssp HHHHHHHHHHHTT-----SCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHHHHHHH
Confidence 9999999999985 356788888875 7899999999752 6789999999988
No 18
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.72 E-value=1.1e-15 Score=154.81 Aligned_cols=192 Identities=15% Similarity=0.209 Sum_probs=167.8
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCC--CchhhHHhcCCHHHHHHhcCCCC-HHHHHHHHHHHHHHhccChHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPI--DNANDLSKLGGLSVLVGQLNHPD-TDIRKISAWILGKASQNNPLVQ 209 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~i--DnAn~l~~lGgl~~Li~lL~s~~-~~Ir~~Aa~~Lgt~aqNNp~~Q 209 (363)
+...++.|.+. +++.+..|+..|..++... .+...+...|+++.|+.+|.+++ +.+|..|+|+|++++..++..+
T Consensus 76 l~~lv~~L~s~--~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~ 153 (528)
T 4b8j_A 76 LPAMIGGVYSD--DNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENT 153 (528)
T ss_dssp HHHHHHHHTSS--CHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHH
Confidence 56667777543 6788999999998886543 56788999999999999999876 9999999999999999999999
Q ss_pred HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 210 KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 210 ~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
..+++.|++|.|+.+|.+++..++..|+++|++|+.+++.....+.+.|+++.|+.+|..+ .+..++..++++|.+|+.
T Consensus 154 ~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~-~~~~v~~~a~~~L~~L~~ 232 (528)
T 4b8j_A 154 KVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEH-TKLSMLRNATWTLSNFCR 232 (528)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTT-CCHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcC-CCHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999888889999999999999999543 367899999999999996
Q ss_pred hhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 290 CQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 290 ~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
. . .........|+++.|+.+|.+++..+++.++.+|..
T Consensus 233 ~-----~-~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~ 270 (528)
T 4b8j_A 233 G-----K-PQPSFEQTRPALPALARLIHSNDEEVLTDACWALSY 270 (528)
T ss_dssp S-----S-SCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred C-----C-CCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 2 2 223344568999999999999999999999999883
No 19
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.72 E-value=3.7e-16 Score=158.29 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=165.2
Q ss_pred CHHHHHHHHHHHHHcccCCCc-hhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHh
Q 017926 146 SLEDSQRALQELLILVEPIDN-ANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKM 224 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDn-An~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~L 224 (363)
+.+.+..++..|.+++...+. ...+...|+++.|+.+|.++++.++..|+++|++++..++...+.+++.|++|.|+.+
T Consensus 257 ~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~l 336 (528)
T 4b8j_A 257 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSL 336 (528)
T ss_dssp CHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHH
Confidence 567888999999999877644 3577888999999999999999999999999999999999999999999999999999
Q ss_pred hcCC-CHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhH
Q 017926 225 VKSS-FVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLF 303 (363)
Q Consensus 225 L~s~-~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l 303 (363)
|.++ +..++..|+++|++++.+++.....+++.|+++.|+.+|.+. +..+|..|+++|.+|+.. .++.....+
T Consensus 337 L~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~--~~~v~~~a~~aL~nl~~~----~~~~~~~~l 410 (528)
T 4b8j_A 337 LTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTA--EFDIKKEAAWAISNATSG----GSHDQIKYL 410 (528)
T ss_dssp HHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHS--CHHHHHHHHHHHHHHHHH----SCHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcC--CHHHHHHHHHHHHHHHcC----CCHHHHHHH
Confidence 9998 889999999999999998888888899999999999999876 678999999999999973 356778888
Q ss_pred HhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 304 RDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 304 ~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.+.|+++.|+.+|..+|.++++.++.+|.
T Consensus 411 ~~~~~i~~L~~lL~~~d~~v~~~al~~L~ 439 (528)
T 4b8j_A 411 VSEGCIKPLCDLLICPDIRIVTVCLEGLE 439 (528)
T ss_dssp HHTTCHHHHHHGGGCSCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 89999999999999999999999999988
No 20
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.71 E-value=4e-16 Score=153.04 Aligned_cols=181 Identities=17% Similarity=0.129 Sum_probs=162.8
Q ss_pred CHHHHHHHHHHHHHcccCC-CchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHh
Q 017926 146 SLEDSQRALQELLILVEPI-DNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKM 224 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~i-DnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~L 224 (363)
+.+.+..++..|.+++... ++...+...|++++|+.+|.++++.+|..|+++|++++.+++...+.+++.|++|.|+++
T Consensus 205 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~l 284 (450)
T 2jdq_A 205 DTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHL 284 (450)
T ss_dssp CHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHH
Confidence 4677888999999988864 566778888999999999999999999999999999999999888889999999999999
Q ss_pred hcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHH
Q 017926 225 VKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFR 304 (363)
Q Consensus 225 L~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~ 304 (363)
+.+++..++..|+++|++++++++...+.+++.|+++.|+.+|+++ +..+|..|+++|.+|+.. .++.....+.
T Consensus 285 l~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~--~~~v~~~a~~~L~~l~~~----~~~~~~~~l~ 358 (450)
T 2jdq_A 285 LSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTA--EFRTRKEAAWAITNATSG----GSAEQIKYLV 358 (450)
T ss_dssp TTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHH----CCHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcC--CHHHHHHHHHHHHHHHcC----CCHHHHHHHH
Confidence 9998899999999999999999888888899999999999999976 578999999999999963 2445566777
Q ss_pred hCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 305 DRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 305 ~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
+.|+++.|+++|..++..+++.++.+|.
T Consensus 359 ~~~~i~~L~~ll~~~~~~v~~~a~~aL~ 386 (450)
T 2jdq_A 359 ELGCIKPLCDLLTVMDSKIVQVALNGLE 386 (450)
T ss_dssp HHTCHHHHHHGGGSSCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 8999999999999999999999999987
No 21
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.70 E-value=2.1e-15 Score=153.13 Aligned_cols=192 Identities=13% Similarity=0.166 Sum_probs=167.1
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCC--CchhhHHhcCCHHHHHHhcCCC-CHHHHHHHHHHHHHHhccChHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPI--DNANDLSKLGGLSVLVGQLNHP-DTDIRKISAWILGKASQNNPLVQ 209 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~i--DnAn~l~~lGgl~~Li~lL~s~-~~~Ir~~Aa~~Lgt~aqNNp~~Q 209 (363)
+...++.|.+. +++.+..|+..|..++... .+...+...|+++.|+.+|.++ ++.+|..|+|+|++++..++..+
T Consensus 89 i~~lv~~L~s~--~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~ 166 (530)
T 1wa5_B 89 LPQMTQQLNSD--DMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQT 166 (530)
T ss_dssp HHHHHHHHSCS--SHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHcCC--CHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHH
Confidence 45555666543 5788899999999987653 4456788899999999999987 89999999999999999999999
Q ss_pred HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 210 KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 210 ~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
..+++.|++|.|+.+|.+++..++..|+++|++++.+++.....+...|+++.|+.++.+. +..++..|+++|.+|+.
T Consensus 167 ~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~--~~~v~~~a~~~L~~L~~ 244 (530)
T 1wa5_B 167 KVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN--KPSLIRTATWTLSNLCR 244 (530)
T ss_dssp HHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSC--CHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccC--CHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999998888888999999999999999985 67799999999999995
Q ss_pred hhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 290 CQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 290 ~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
. ...........++++.|+.+|.++|..++..++.+|..
T Consensus 245 ~-----~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~ 283 (530)
T 1wa5_B 245 G-----KKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISY 283 (530)
T ss_dssp C-----SSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred C-----CCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 2 22334455668999999999999999999999999883
No 22
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.69 E-value=3e-16 Score=146.07 Aligned_cols=154 Identities=14% Similarity=0.082 Sum_probs=134.7
Q ss_pred CHHHHHHhcCCCCH--HHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHH
Q 017926 175 GLSVLVGQLNHPDT--DIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQE 252 (363)
Q Consensus 175 gl~~Li~lL~s~~~--~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~ 252 (363)
.+|+++++|+++++ +++..|+++|.+++.+|+..+..+.+.|+||+|+++|++++..++..|++||.+|..+++.+..
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~ 88 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKL 88 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 58999999999888 9999999999999999999999999999999999999999999999999999999998899999
Q ss_pred HHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhcc---------------
Q 017926 253 MFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTA--------------- 317 (363)
Q Consensus 253 ~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~--------------- 317 (363)
.+.++||++.|+.+|++.. +..++..|+.+|.+|+. .+..+..+.+. .++.|++++.
T Consensus 89 ~I~~~GaI~~Lv~lL~~~~-~~~~~e~a~~aL~nLS~------~~~~k~~i~~~-~i~~Lv~ll~~p~sG~~~~~~~~~~ 160 (233)
T 3tt9_A 89 EVAELNGVPRLLQVLKQTR-DLETKKQITGLLWNLSS------NDKLKNLMITE-ALLTLTENIIIPFSGWPEGDYPKAN 160 (233)
T ss_dssp HHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHT------SGGGHHHHHHH-HHHHHCCCCCHHHHCCCGGGCCCCC
T ss_pred HHHHcCCHHHHHHHHccCC-CHHHHHHHHHHHHHHHc------ChhhHHHHHhc-cHHHHHHHHhccccCCccccccccc
Confidence 9999999999999998421 56799999999999985 44566777764 6899998763
Q ss_pred -CCChhHHHHHHHHHHhhcc
Q 017926 318 -SADLDLQEKVFLEHVFCGL 336 (363)
Q Consensus 318 -~~d~~lqE~al~aL~~~~~ 336 (363)
..+.++++.|..+|..+++
T Consensus 161 ~~~~~~v~~na~~~L~nLss 180 (233)
T 3tt9_A 161 GLLDFDIFYNVTGCLRNMSS 180 (233)
T ss_dssp TTCCHHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHHHHhc
Confidence 1267999999999994433
No 23
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.68 E-value=1.7e-15 Score=148.65 Aligned_cols=193 Identities=13% Similarity=0.115 Sum_probs=164.1
Q ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHcccC-CCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHH
Q 017926 132 LIQIAIDDLNNSTLSLEDSQRALQELLILVEP-IDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 132 lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~-iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
.+...++.+.+. .+.+.+..|+..|..++.. .++...+...|+++.|+.+|+++++++|..|+|+|++++.+++..+.
T Consensus 65 ~i~~L~~~L~~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~ 143 (450)
T 2jdq_A 65 VVARFVEFLKRK-ENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
T ss_dssp HHHHHHHHHTCT-TCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHCCC-CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 455556666554 2578889999999998875 35667788899999999999999999999999999999999999999
Q ss_pred HHHHcCcHHHHHHhhcC-CCHHHHHHHHHHHHHHhcCC-cccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHh
Q 017926 211 QVLELGALSKLMKMVKS-SFVEEAVKALYTVSSLIRNN-LAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLA 288 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s-~~~~v~~kAL~ALSsLiR~~-~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~ 288 (363)
.+++.|++|.|++++.+ .+..++..|+++|++++++. +.....+. .++++.|+.+++++ +..++..++++|.+|+
T Consensus 144 ~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~--~~~v~~~a~~~L~~l~ 220 (450)
T 2jdq_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKV-SPCLNVLSWLLFVS--DTDVLADACWALSYLS 220 (450)
T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGT-GGGHHHHHHHTTCC--CHHHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHH-HHHHHHHHHHHccC--CHHHHHHHHHHHHHHH
Confidence 99999999999999996 57899999999999999876 43333333 78999999999976 6789999999999999
Q ss_pred hhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 289 KCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 289 ~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
. ..+.....+.+.|+++.|+.+|.+++..+++.++.+|..
T Consensus 221 ~-----~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~ 260 (450)
T 2jdq_A 221 D-----GPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGN 260 (450)
T ss_dssp S-----SSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred C-----CCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHH
Confidence 5 234456677889999999999999999999999999983
No 24
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.68 E-value=5.5e-16 Score=156.27 Aligned_cols=152 Identities=14% Similarity=0.110 Sum_probs=135.6
Q ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHH
Q 017926 175 GLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMF 254 (363)
Q Consensus 175 gl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f 254 (363)
.+|.++.+|+++++++|..|+++|++++.+|+..+..+.+.|++|.|+++|++++..++..|++||.+|..+++++...+
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 58999999999999999999999999999999999899999999999999999999999999999999999889999999
Q ss_pred HhcCcHHHHHHhhc-CCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhc--------cCC------
Q 017926 255 YVEAGDLMLQDILG-NSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLT--------ASA------ 319 (363)
Q Consensus 255 ~~~gG~~~L~~lL~-s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL--------~~~------ 319 (363)
.+.||++.|+.+|+ ++ +..++..|+++|.+|+. +++.+..+.+ |.++.|+++| .++
T Consensus 83 ~~~G~i~~Lv~lL~~~~--~~~~~~~a~~aL~nLa~------~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e 153 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTG--NAEIQKQLTGLLWNLSS------TDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSRE 153 (457)
T ss_dssp HHTTCHHHHHHHHTTCC--CHHHHHHHHHHHHHHHT------SSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------
T ss_pred HHcCCHHHHHHHHhhCC--CHHHHHHHHHHHHHHhc------CHHhHHHHHh-ccHHHHHHHHhccccccccCccchhcc
Confidence 99999999999998 54 56799999999999995 4677888888 9999999999 332
Q ss_pred --ChhHHHHHHHHHHhhc
Q 017926 320 --DLDLQEKVFLEHVFCG 335 (363)
Q Consensus 320 --d~~lqE~al~aL~~~~ 335 (363)
+.+++..++.+|..++
T Consensus 154 ~~~~~v~~~a~~aL~nLs 171 (457)
T 1xm9_A 154 VVDPEVFFNATGCLRNLS 171 (457)
T ss_dssp CCCHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHc
Confidence 4556669999998443
No 25
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.68 E-value=5.3e-16 Score=166.85 Aligned_cols=189 Identities=11% Similarity=0.015 Sum_probs=163.7
Q ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHcccCC-CchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHH
Q 017926 135 IAIDDLNNSTLSLEDSQRALQELLILVEPI-DNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVL 213 (363)
Q Consensus 135 ~al~~L~~~~~s~e~k~~AL~~L~~Lve~i-DnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~l 213 (363)
-.+..|. .+.+...+..|+..|.+|...- ++...+...||++.|+.+|.++++.||..|+++|++++.+ +..|..++
T Consensus 584 pLv~LL~-~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~-~~~~~~~v 661 (810)
T 3now_A 584 PLLNLLQ-QDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMS-EDVIKMFE 661 (810)
T ss_dssp HHHHTTS-TTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTS-HHHHHHHH
T ss_pred HHHHHhC-CCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCC-hHHHHHHH
Confidence 3344443 3335556678899999998874 6788899999999999999999999999999999999984 56888888
Q ss_pred H-cCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHh-cCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhh
Q 017926 214 E-LGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYV-EAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQ 291 (363)
Q Consensus 214 e-~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~-~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~ 291 (363)
+ .|+++.|+.|+.+++..++..|.+||+++..+++...+.+++ .||++.|+.+|.++ +.++|..|+|+|.+|+.
T Consensus 662 ~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~--d~~vq~~A~~aL~NL~~-- 737 (810)
T 3now_A 662 GNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANP--SPAVQHRGIVIILNMIN-- 737 (810)
T ss_dssp SSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCS--SHHHHHHHHHHHHHHHT--
T ss_pred hccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCC--CHHHHHHHHHHHHHHHh--
Confidence 6 699999999999999999999999999999988888888998 89999999999987 78899999999999985
Q ss_pred hhcCCCCcchhHHhCCcHHHHHHhccCC---ChhHHHHHHHHHH
Q 017926 292 LENMHKVEPPLFRDRFFLKSVVDLTASA---DLDLQEKVFLEHV 332 (363)
Q Consensus 292 ~~~~~~~~~~~l~~~g~v~~Lv~lL~~~---d~~lqE~al~aL~ 332 (363)
++++....+.+.|+++.|+++|+.. +.++.+.|+.+|.
T Consensus 738 ---~s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~ 778 (810)
T 3now_A 738 ---AGEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLA 778 (810)
T ss_dssp ---TCHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHH
Confidence 3456788899999999999999765 6899999998876
No 26
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.67 E-value=2.5e-15 Score=152.63 Aligned_cols=192 Identities=12% Similarity=0.085 Sum_probs=167.3
Q ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHcccCC-CchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHH
Q 017926 134 QIAIDDLNNSTLSLEDSQRALQELLILVEPI-DNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQV 212 (363)
Q Consensus 134 k~al~~L~~~~~s~e~k~~AL~~L~~Lve~i-DnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~ 212 (363)
...+..+.+ .+.+.+..|+..|..++... .+.......|++++|+.+|.++++.++..|+|+|++++.+++...+.+
T Consensus 218 ~~L~~ll~~--~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~ 295 (530)
T 1wa5_B 218 EPILGLFNS--NKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAV 295 (530)
T ss_dssp HHHHHGGGS--CCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHhcc--CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 334445544 45677888999999998765 455566668999999999999999999999999999999988888889
Q ss_pred HHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhh
Q 017926 213 LELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQL 292 (363)
Q Consensus 213 le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~ 292 (363)
++.|++|.|+.+|.+++..++..|+++|++++.+++.....+++.|+++.|+.+|+++ +..+|..|+++|.+|+.
T Consensus 296 ~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~--~~~vr~~A~~aL~~l~~--- 370 (530)
T 1wa5_B 296 IDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP--KENIKKEACWTISNITA--- 370 (530)
T ss_dssp HHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTT---
T ss_pred HhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCC--CHHHHHHHHHHHHHHHc---
Confidence 9999999999999998899999999999999999888888899999999999999987 57899999999999985
Q ss_pred hcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhh
Q 017926 293 ENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFC 334 (363)
Q Consensus 293 ~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~ 334 (363)
..+.....+.+.|+++.|+.+|..++..++..++.+|..+
T Consensus 371 --~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l 410 (530)
T 1wa5_B 371 --GNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNA 410 (530)
T ss_dssp --SCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3445566778899999999999999999999999998843
No 27
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.67 E-value=8.3e-16 Score=147.68 Aligned_cols=152 Identities=14% Similarity=0.149 Sum_probs=136.2
Q ss_pred HHHHH-HhhcCCCCHHHHHHHHHHHHHcccCCC-chhhHHhcCCHHHHHHhcCC-CCHHHHHHHHHHHHHHhccChHHHH
Q 017926 134 QIAID-DLNNSTLSLEDSQRALQELLILVEPID-NANDLSKLGGLSVLVGQLNH-PDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 134 k~al~-~L~~~~~s~e~k~~AL~~L~~Lve~iD-nAn~l~~lGgl~~Li~lL~s-~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
.-.+. .|.+ .+++.|..|+..|..++.+-+ +.+.+.+.||+++|+.+|++ +++.+|..|+|+|++++.+++..++
T Consensus 84 ~~Lv~~lL~s--~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~ 161 (296)
T 1xqr_A 84 HLLVGRYLEA--GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 161 (296)
T ss_dssp HHHHHTTTTC--SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcC--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHH
Confidence 34555 5543 367889999999999988654 56678899999999999985 5899999999999999999999999
Q ss_pred HHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 211 QVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
.|.+.|++|.|+.+|++++..++.+|+|||++++.+++..+..|++.|+++.|+.+|.++ +..++.+|+.+|.+|+.
T Consensus 162 ~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~--d~~v~~~al~aL~~l~~ 238 (296)
T 1xqr_A 162 QFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTE--HSPFHEHVLGALCSLVT 238 (296)
T ss_dssp HHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSC--CSTHHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCC--ChhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999898999999999999999999987 55699999999999996
No 28
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.66 E-value=3.5e-15 Score=149.61 Aligned_cols=193 Identities=13% Similarity=0.116 Sum_probs=166.6
Q ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHH
Q 017926 132 LIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQ 211 (363)
Q Consensus 132 lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~ 211 (363)
.+...++.|.+. .+.+.+..++..|..+....++...+.+.|++++|+.+|+++++++|..|+++|++++.+++..+..
T Consensus 60 ~i~~Lv~~L~~~-~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 138 (529)
T 1jdh_A 60 MVSAIVRTMQNT-NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 138 (529)
T ss_dssp HHHHHHHHHHHC-CCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred hHHHHHHHHhcC-CCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHH
Confidence 455566666543 3678888999999999888888999999999999999999999999999999999999998888999
Q ss_pred HHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhh
Q 017926 212 VLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQ 291 (363)
Q Consensus 212 ~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~ 291 (363)
+.+.|++|.|++++++++..++..++.+|.++..+++..+..+.+.||++.|+.+|++.. +...+..++.++.+|+.
T Consensus 139 i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~-~~~~~~~a~~~L~~l~~-- 215 (529)
T 1jdh_A 139 VRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSV-- 215 (529)
T ss_dssp HHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTT--
T ss_pred HHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCC-hHHHHHHHHHHHHHHhc--
Confidence 999999999999999988889999999999999988999999999999999999998764 45677788899999984
Q ss_pred hhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 292 LENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 292 ~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.+..+..+.+.|+++.|+.++..++..+++.++.+|.
T Consensus 216 ----~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~ 252 (529)
T 1jdh_A 216 ----CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLR 252 (529)
T ss_dssp ----STTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHH
T ss_pred ----CcccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHH
Confidence 5567788888888888888887777777777766665
No 29
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.64 E-value=1.2e-14 Score=151.56 Aligned_cols=196 Identities=14% Similarity=0.111 Sum_probs=171.3
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHH
Q 017926 131 QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
..+...++.|.+. .+.+.+..|...|..+....++...+.+.|++++|+.+|+++++.+|..|+++|++++.+++..+.
T Consensus 56 ~~i~~Lv~~L~~~-~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~ 134 (644)
T 2z6h_A 56 QMVSAIVRTMQNT-NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM 134 (644)
T ss_dssp HHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHH
T ss_pred ChHHHHHHHHhcC-CCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHH
Confidence 4456666777653 367888999999999998888899999999999999999999999999999999999999888899
Q ss_pred HHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 211 QVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.+.+.|++|.|+++|++++..++..++.+|++++.+++..+..+.+.||++.|+.+|++.. ...++..++.+|.+|+.
T Consensus 135 ~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~-~~~~~~~a~~~L~nLs~- 212 (644)
T 2z6h_A 135 AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSV- 212 (644)
T ss_dssp HHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCC-CHHHHHHHHHHHHHHTT-
T ss_pred HHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcCC-hHHHHHHHHHHHHHHhc-
Confidence 9999999999999999988888888999999999888889999999999999999999874 56788899999999984
Q ss_pred hhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhh
Q 017926 291 QLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFC 334 (363)
Q Consensus 291 ~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~ 334 (363)
.+..+..+++.|+++.|+.++..++..+++.++.+|..+
T Consensus 213 -----~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL 251 (644)
T 2z6h_A 213 -----CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNL 251 (644)
T ss_dssp -----CTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHH
T ss_pred -----CcccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 567788889999999999988887778888777777633
No 30
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.63 E-value=4.3e-15 Score=154.85 Aligned_cols=192 Identities=14% Similarity=0.062 Sum_probs=157.8
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHccc-CCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhcc-ChHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVE-PIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQN-NPLVQK 210 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve-~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqN-Np~~Q~ 210 (363)
+...+..|... +++.+..|...|..++. +.++...+...||+|+|+.+|.++++++|..|+|+|++++.. |+..+.
T Consensus 50 i~~LV~~L~s~--~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~ 127 (584)
T 3l6x_A 50 LPEVIAMLGFR--LDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKI 127 (584)
T ss_dssp HHHHHHHTTCS--CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHCCC--CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHH
Confidence 55566666543 56778888888988885 667888999999999999999999999999999999999985 799999
Q ss_pred HHHHcCcHHHHHHhhcC-CCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhc----------------CCCcc
Q 017926 211 QVLELGALSKLMKMVKS-SFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILG----------------NSSFE 273 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s-~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~----------------s~~~~ 273 (363)
.+++.|+||.|+++|.+ .+.+++..|..||-+|.. ++.....+++ +|++.|+.++. .+..+
T Consensus 128 ~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~-~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d 205 (584)
T 3l6x_A 128 AIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSS-HDSIKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEW 205 (584)
T ss_dssp HHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT-SGGGHHHHHH-HTHHHHHHHTHHHHHCCC----------CCCC
T ss_pred HHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-CchhhHHHHh-ccHHHHHHHHhccccccccccccccccccccc
Confidence 99999999999999997 467788888888888876 5667777774 68999999872 01125
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh-CCcHHHHHHhccC------CChhHHHHHHHHHHh
Q 017926 274 IRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD-RFFLKSVVDLTAS------ADLDLQEKVFLEHVF 333 (363)
Q Consensus 274 ~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~-~g~v~~Lv~lL~~------~d~~lqE~al~aL~~ 333 (363)
..++..|+++|.+|+. .++..+..+++ .|+++.|+.+|+. .+...+|.++.+|..
T Consensus 206 ~~V~~nAa~~L~NLs~-----~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~N 267 (584)
T 3l6x_A 206 ESVLTNTAGCLRNVSS-----ERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRN 267 (584)
T ss_dssp HHHHHHHHHHHHHHTS-----SCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-----CCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHH
Confidence 7899999999999995 34455777776 5778899999974 467899999999873
No 31
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.62 E-value=5.3e-15 Score=159.14 Aligned_cols=180 Identities=13% Similarity=0.052 Sum_probs=155.1
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHH---hcCCHHHHHHhcCCC-CHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLS---KLGGLSVLVGQLNHP-DTDIRKISAWILGKASQNNPLVQKQVLELGALSKL 221 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~---~lGgl~~Li~lL~s~-~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~L 221 (363)
+.+-|..|...|..++...+....|. ..|++|+|+.+|.++ +...+..|+|+|++++..++..++.+++.|++|+|
T Consensus 549 ~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~L 628 (810)
T 3now_A 549 TEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKI 628 (810)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHH
Confidence 45668888888888877666555442 257999999999876 44556799999999999999999999999999999
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHh-cCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcc
Q 017926 222 MKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYV-EAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEP 300 (363)
Q Consensus 222 l~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~-~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~ 300 (363)
+.++.+++..++..|+.+|++|+.+ ++.+..|.+ .|+++.|+.++.++ +..+|+.|+|+|++|+. +++...
T Consensus 629 v~LL~s~~~~Vq~~A~~~L~NLa~~-~~~~~~~v~~~g~l~~Lv~LL~s~--d~~vq~~Aa~ALanLt~-----~s~~~~ 700 (810)
T 3now_A 629 EYYLMEDHLYLTRAAAQCLCNLVMS-EDVIKMFEGNNDRVKFLALLCEDE--DEETATACAGALAIITS-----VSVKCC 700 (810)
T ss_dssp HHHHHSCCTTHHHHHHHHHHHHTTS-HHHHHHHHSSSSHHHHHHHGGGCS--SHHHHHHHHHHHHHHHH-----HCHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhCC-hHHHHHHHhccCcHHHHHHHhcCC--CHHHHHHHHHHHHHHhC-----CCHHHH
Confidence 9999998889999999999999986 567888886 68899999999986 67899999999999996 245567
Q ss_pred hhHHh-CCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 301 PLFRD-RFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 301 ~~l~~-~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
..+.+ .|+++.|+.+|.++|.++|..|+.+|..
T Consensus 701 ~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~N 734 (810)
T 3now_A 701 EKILAIASWLDILHTLIANPSPAVQHRGIVIILN 734 (810)
T ss_dssp HHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 77887 8999999999999999999999999973
No 32
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.60 E-value=1.4e-14 Score=150.87 Aligned_cols=156 Identities=13% Similarity=0.051 Sum_probs=138.1
Q ss_pred hcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcC-Cccc
Q 017926 172 KLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRN-NLAG 250 (363)
Q Consensus 172 ~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~-~~~a 250 (363)
.-+++++|+.+|.+++++++..|+++|.+++..++..+..+.+.|+||+|+++|++++..++..|++||.+|..+ ++.+
T Consensus 46 ~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~n 125 (584)
T 3l6x_A 46 RQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDN 125 (584)
T ss_dssp CCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHH
T ss_pred ccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999999999986 6889
Q ss_pred HHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhcc-------------
Q 017926 251 QEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTA------------- 317 (363)
Q Consensus 251 ~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~------------- 317 (363)
...+.++||++.|+.+|++.. +..++..|+.+|.+|+. +++.+..+.+ +.++.|+++|.
T Consensus 126 k~~I~~~GaIp~LV~LL~s~~-~~~~~e~aa~aL~nLS~------~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~ 197 (584)
T 3l6x_A 126 KIAIKNCDGVPALVRLLRKAR-DMDLTEVITGTLWNLSS------HDSIKMEIVD-HALHALTDEVIIPHSGWEREPNED 197 (584)
T ss_dssp HHHHHHTTHHHHHHHHHHHCC-SHHHHHHHHHHHHHHTT------SGGGHHHHHH-HTHHHHHHHTHHHHHCCC------
T ss_pred HHHHHHcCCHHHHHHHHcCCC-CHHHHHHHHHHHHHHhC------CchhhHHHHh-ccHHHHHHHHhccccccccccccc
Confidence 999999999999999999742 46689999999999985 4566777775 46899999871
Q ss_pred -----CCChhHHHHHHHHHHhhc
Q 017926 318 -----SADLDLQEKVFLEHVFCG 335 (363)
Q Consensus 318 -----~~d~~lqE~al~aL~~~~ 335 (363)
..+.++++.|..+|..++
T Consensus 198 ~k~~~~~d~~V~~nAa~~L~NLs 220 (584)
T 3l6x_A 198 CKPRHIEWESVLTNTAGCLRNVS 220 (584)
T ss_dssp ----CCCCHHHHHHHHHHHHHHT
T ss_pred ccccccccHHHHHHHHHHHHHHh
Confidence 236899999999999443
No 33
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.58 E-value=6.6e-14 Score=150.12 Aligned_cols=192 Identities=14% Similarity=0.110 Sum_probs=163.1
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQV 212 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~ 212 (363)
+...+..|.+. .+.+.+..|+..|..+....++...+...|++++|+.+|+++++.+|..|+++|++++.+++..+..+
T Consensus 194 i~~Lv~~L~~~-~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v 272 (780)
T 2z6g_A 194 VSAIVRTMQNT-NDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAV 272 (780)
T ss_dssp HHHHHHHHHHC-CCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHH
T ss_pred HHHHHHHHcCC-CCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHH
Confidence 33344445443 36788999999999988888888899999999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhh
Q 017926 213 LELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQL 292 (363)
Q Consensus 213 le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~ 292 (363)
.+.|++|.|+++|.+++..++..++.+|..++.+++..+..+.+.||++.|+.+|++.+ +...+..++.++.+|+.
T Consensus 273 ~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~-~~~~~~~a~~aL~~Ls~--- 348 (780)
T 2z6g_A 273 RLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSV--- 348 (780)
T ss_dssp HHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHT---
T ss_pred HHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcCC-HHHHHHHHHHHHHHhhc---
Confidence 99999999999999988888999999999999888999999999999999999999864 45677788999999984
Q ss_pred hcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 293 ENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 293 ~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.+..+..+.+.|+++.|+.+|.+++..+++.++.+|.
T Consensus 349 ---~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~ 385 (780)
T 2z6g_A 349 ---CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLR 385 (780)
T ss_dssp ---STTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHH
T ss_pred ---ChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHH
Confidence 4456777778888888888877777777777666655
No 34
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.54 E-value=9.7e-14 Score=139.08 Aligned_cols=193 Identities=13% Similarity=0.065 Sum_probs=162.1
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhc-CCHHHHHHhcCC-CCHHHHHHHHHHHHHHhccChHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKL-GGLSVLVGQLNH-PDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~l-Ggl~~Li~lL~s-~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
+...++.+.+ .+++.+..|+..|..+..+.++...+... |++++|+.+|.+ +++++|..|+++|++++.+ +..+.
T Consensus 19 i~~Lv~lL~~--~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~-~~~~~ 95 (529)
T 1jdh_A 19 IPELTKLLND--EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGLL 95 (529)
T ss_dssp HHHHHHHHTC--SCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHHHH
T ss_pred HHHHHHHhCC--CCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC-chhHH
Confidence 4445555553 36678889999999988877666566654 899999999964 5899999999999999875 66899
Q ss_pred HHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 211 QVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.+.+.|++|.|+++|+++++.++..|+++|.+++.+++..+..+.+.|+++.|+.+|+++ +.+++..++.++.+|+.
T Consensus 96 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~--~~~~~~~~~~~L~~la~- 172 (529)
T 1jdh_A 96 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--NVKFLAITTDCLQILAY- 172 (529)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHT-
T ss_pred HHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcC--CHHHHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999998777888899999999999999986 56788889999999985
Q ss_pred hhhcCCCCcchhHHhCCcHHHHHHhccCC-ChhHHHHHHHHHHhhc
Q 017926 291 QLENMHKVEPPLFRDRFFLKSVVDLTASA-DLDLQEKVFLEHVFCG 335 (363)
Q Consensus 291 ~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~-d~~lqE~al~aL~~~~ 335 (363)
.+++.+..+.+.|.++.|+.+|+.+ +...++.+..+|..++
T Consensus 173 ----~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~ 214 (529)
T 1jdh_A 173 ----GNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLS 214 (529)
T ss_dssp ----TCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHh
Confidence 3567788888999999999999876 5567777888877433
No 35
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.52 E-value=4.6e-13 Score=143.61 Aligned_cols=202 Identities=14% Similarity=0.113 Sum_probs=162.3
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCc----hhhHHhcCCHHHHHHhcCCCCH-HHHHHHHHHHHHHhccChH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDN----ANDLSKLGGLSVLVGQLNHPDT-DIRKISAWILGKASQNNPL 207 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDn----An~l~~lGgl~~Li~lL~s~~~-~Ir~~Aa~~Lgt~aqNNp~ 207 (363)
+...++.+.+.+...+.+..|+..|..++..... ...+...|++++|+.+|.+++. .+|..|+|+|++++. ++.
T Consensus 443 i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~-~~~ 521 (780)
T 2z6g_A 443 IEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLAL-CPA 521 (780)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHS-SHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhc-CHH
Confidence 4455555655333457788889999988764322 3477789999999999988764 999999999999997 566
Q ss_pred HHHHHHHcCcHHHHHHhhcCCC----------------------HHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHH
Q 017926 208 VQKQVLELGALSKLMKMVKSSF----------------------VEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQD 265 (363)
Q Consensus 208 ~Q~~~le~G~lp~Ll~LL~s~~----------------------~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~ 265 (363)
.|..+.+.|++|.|+++|.+.+ .+++..++.||++++++ +.++..+.+.|+++.|+.
T Consensus 522 ~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~La~~-~~~~~~l~~~~~i~~Lv~ 600 (780)
T 2z6g_A 522 NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARD-IHNRIVIRGLNTIPLFVQ 600 (780)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHHHTTS-HHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHHHHHHHHHHHHHhcC-hhhHHHHHHCCcHHHHHH
Confidence 7888999999999999997632 34566788889988864 677778889999999999
Q ss_pred hhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcccccCchhhh
Q 017926 266 ILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGLVFCTCPCIV 345 (363)
Q Consensus 266 lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~~~~~~~~~~ 345 (363)
+|.++ +..++..|+.+|.+|+. ++..+..+.+.|+++.|+.++.+++.++++.|+.||..+. ...+..|
T Consensus 601 lL~~~--~~~v~~~a~~aL~~L~~------~~~~~~~i~~~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~---~~~~~~~ 669 (780)
T 2z6g_A 601 LLYSP--IENIQRVAAGVLCELAQ------DKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS---EDKPQDY 669 (780)
T ss_dssp GGGCS--CHHHHHHHHHHHHHHHT------SHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHH---TTSCTTH
T ss_pred HHcCC--CHHHHHHHHHHHHHHhc------CHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHH---cCChHhh
Confidence 99987 67799999999999984 5567888999999999999999999999999999988433 3333455
Q ss_pred hH
Q 017926 346 RG 347 (363)
Q Consensus 346 r~ 347 (363)
+.
T Consensus 670 ~~ 671 (780)
T 2z6g_A 670 KK 671 (780)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 36
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.51 E-value=4.2e-13 Score=140.03 Aligned_cols=193 Identities=13% Similarity=0.065 Sum_probs=164.0
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhc-CCHHHHHHhcCC-CCHHHHHHHHHHHHHHhccChHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKL-GGLSVLVGQLNH-PDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~l-Ggl~~Li~lL~s-~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
+...+..|.+ .++..+..|+..|..+..+.++...+... |++++|+.+|.+ +++++|..|+.+|.+++.+ +..+.
T Consensus 16 i~~Lv~lL~~--~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~-~~~~~ 92 (644)
T 2z6h_A 16 IPELTKLLND--EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGLL 92 (644)
T ss_dssp HHHHHHHHTC--SCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTS-HHHHH
T ss_pred HHHHHHHHcC--CCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcC-hhhHH
Confidence 4455555653 36688999999999999888766666654 889999999976 4899999999999999976 55888
Q ss_pred HHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 211 QVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.+.+.|++|.|+++|+++++.++..|+++|.+++.+++.....+.+.|+++.|+.+|+++ +.+++..++.+|.+|+.
T Consensus 93 ~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~--~~~~~~~a~~~L~~La~- 169 (644)
T 2z6h_A 93 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--NVKFLAITTDCLQILAY- 169 (644)
T ss_dssp HHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHT-
T ss_pred HHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcC--CHHHHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999998877888899999999999999987 46788888889999985
Q ss_pred hhhcCCCCcchhHHhCCcHHHHHHhccCC-ChhHHHHHHHHHHhhc
Q 017926 291 QLENMHKVEPPLFRDRFFLKSVVDLTASA-DLDLQEKVFLEHVFCG 335 (363)
Q Consensus 291 ~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~-d~~lqE~al~aL~~~~ 335 (363)
.+++.+..+.+.|.++.|+.+|++. ...+++.++.+|..++
T Consensus 170 ----~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs 211 (644)
T 2z6h_A 170 ----GNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLS 211 (644)
T ss_dssp ----TCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHT
T ss_pred ----cCcHHHHHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHh
Confidence 3566778889999999999999987 4678888999988443
No 37
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=99.27 E-value=1.2e-10 Score=121.68 Aligned_cols=202 Identities=17% Similarity=0.152 Sum_probs=164.8
Q ss_pred HhHHHHHHHHHHcC--CCCHH--HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCC------------------chhh
Q 017926 112 KRQMEIKELMEKLK--TPSDA--QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPID------------------NAND 169 (363)
Q Consensus 112 ~r~~~Lkeal~~l~--~~~d~--~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iD------------------nAn~ 169 (363)
.||.-+..+- .+. -+.++ .-|+..+.+|++...+.|--..+|+.|..+....+ ++..
T Consensus 38 DRR~Av~~Lk-~~sk~y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~ 116 (651)
T 3grl_A 38 DRRNAVRALK-SLSKKYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEI 116 (651)
T ss_dssp HHHHHHHHHH-HTTTTTTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHhHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHH
Confidence 4666665543 232 23332 33788888888877777777778888877655432 2334
Q ss_pred HH-hcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChH-HHHHHHHc-CcHHHHHHhhcCCCHHHHHHHHHHHHHHhcC
Q 017926 170 LS-KLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPL-VQKQVLEL-GALSKLMKMVKSSFVEEAVKALYTVSSLIRN 246 (363)
Q Consensus 170 l~-~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~-~Q~~~le~-G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~ 246 (363)
|. +-++++.|+.+|++++-.+|.++..+|..++.++|. .|+.++.. +++|.|+.+|+++...+|..++..|+.++++
T Consensus 117 f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~ 196 (651)
T 3grl_A 117 FIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRS 196 (651)
T ss_dssp HHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTT
T ss_pred HHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcC
Confidence 43 458999999999999999999999999999999999 99999977 9999999999998889999999999999999
Q ss_pred CcccHHHHHhcCcHHHHHHhhcCCCc--cHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCC
Q 017926 247 NLAGQEMFYVEAGDLMLQDILGNSSF--EIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASA 319 (363)
Q Consensus 247 ~~~a~~~f~~~gG~~~L~~lL~s~~~--~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~ 319 (363)
++..|+.+.-.||++.|..++..... .-.+...++.++.+|+. .++.+...|.+.|+++.|..+|..+
T Consensus 197 n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr-----~N~sNQ~~FrEt~~i~~L~~LL~~~ 266 (651)
T 3grl_A 197 NGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLK-----NNNSNQNFFKEGSYIQRMKPWFEVG 266 (651)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHT-----TCHHHHHHHHHTTCGGGGGGGGCCC
T ss_pred CHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHh-----cCHHHHHHHHHcCCHHHHHHHhCCC
Confidence 99988888888999999999986431 23578899999999996 5777899999999999999999865
No 38
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.4e-11 Score=129.57 Aligned_cols=220 Identities=10% Similarity=0.080 Sum_probs=154.0
Q ss_pred HHHHHhHHHHHHHHHHcCCCCHHHHHHHHHHHhhcCCCCHHHH---HHHHHHHHHcccC-------C-----------C-
Q 017926 108 SELKKRQMEIKELMEKLKTPSDAQLIQIAIDDLNNSTLSLEDS---QRALQELLILVEP-------I-----------D- 165 (363)
Q Consensus 108 e~l~~r~~~Lkeal~~l~~~~d~~lmk~al~~L~~~~~s~e~k---~~AL~~L~~Lve~-------i-----------D- 165 (363)
|.+-+...+++.+++.++.+.+..+.-.++.++.|-..+.+.. ..-+..|..+.+. . +
T Consensus 369 e~L~~d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~~~e~~~l~~Lk~~A~~~~p~~~~~d~~~~~~~~v~~~ 448 (778)
T 3opb_A 369 IMIRSNESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEXXXXXXXXXXXXXXXXXXXPAADKVGAEKAAKEDILLF 448 (778)
T ss_dssp HHHHHCHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCCCCCCC------------------CCTHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCcccchhhhhhhhhhhhccccCcccCcccccccchHHHHHH
Confidence 4555667777777777764445556666777765533211100 0012222222211 1 1
Q ss_pred chhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHH---HHHHHHHHHHH
Q 017926 166 NANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVE---EAVKALYTVSS 242 (363)
Q Consensus 166 nAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~---v~~kAL~ALSs 242 (363)
|...+.+.|++++|+.++.++++.+|..|+|+|.+++. +++++..+++.|+++.|+.+|.+.+.. .+..|+.||++
T Consensus 449 ~~~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~-d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALAr 527 (778)
T 3opb_A 449 NEKYILRTELISFLKREMHNLSPNCKQQVVRIIYNITR-SKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTR 527 (778)
T ss_dssp HHHHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHT-SGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 34567788999999999999999999999999999985 599999999999999999999987654 78999999999
Q ss_pred HhcCCcccHHHHHh---cCcHHHHHHhhcC-CCc-----------cHHHHHHHHHHHHHHhhhhhhcCC---CCcchhHH
Q 017926 243 LIRNNLAGQEMFYV---EAGDLMLQDILGN-SSF-----------EIRLHRKAVSLVGDLAKCQLENMH---KVEPPLFR 304 (363)
Q Consensus 243 LiR~~~~a~~~f~~---~gG~~~L~~lL~s-~~~-----------~~klr~kA~~lL~~L~~~~~~~~~---~~~~~~l~ 304 (363)
|.-...+.. .|.. .|+++.|+.+|.. +.. +..-+..|+.+|++|+.. .+ ++.+..++
T Consensus 528 Llis~np~~-~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~----~~n~~E~~r~~Ii 602 (778)
T 3opb_A 528 MLIFTNPGL-IFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASS----ETSDGEEVCKHIV 602 (778)
T ss_dssp HHHTSCHHH-HSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHC----CSHHHHHHHHHHH
T ss_pred HHhcCCHHH-HcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcC----CcccchHHHHHHH
Confidence 886543322 3422 4899999999983 211 112366899999999972 11 23467777
Q ss_pred hC-CcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 305 DR-FFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 305 ~~-g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
++ |+++.|.++|.+++..+|..|+.++-.
T Consensus 603 ~~~ga~~~L~~LL~s~n~~VrrAA~elI~N 632 (778)
T 3opb_A 603 STKVYWSTIENLMLDENVPLQRSTLELISN 632 (778)
T ss_dssp HSHHHHHHHHHGGGCSSHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 75 999999999999999999999999773
No 39
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.22 E-value=5.2e-11 Score=126.97 Aligned_cols=197 Identities=13% Similarity=0.105 Sum_probs=152.7
Q ss_pred HHHHHHhhcCCCC-HHHHHHHHHHHHHcccCCCchhhHHh---cCCHHHHHHhcCC-CCH------------HH-HHHHH
Q 017926 134 QIAIDDLNNSTLS-LEDSQRALQELLILVEPIDNANDLSK---LGGLSVLVGQLNH-PDT------------DI-RKISA 195 (363)
Q Consensus 134 k~al~~L~~~~~s-~e~k~~AL~~L~~Lve~iDnAn~l~~---lGgl~~Li~lL~s-~~~------------~I-r~~Aa 195 (363)
+..+..+.+.... .+.|..|...|..+....|...-|.. .|+++||+.+|.. +.. .+ +..|+
T Consensus 501 ~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL 580 (778)
T 3opb_A 501 KIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEAL 580 (778)
T ss_dssp HHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHHHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHH
Confidence 3344444443211 12588899999998888887776642 5999999999982 221 13 78999
Q ss_pred HHHHHHhccC----hHHHHHHHHc-CcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccH-HHHHhc------CcHHHH
Q 017926 196 WILGKASQNN----PLVQKQVLEL-GALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQ-EMFYVE------AGDLML 263 (363)
Q Consensus 196 ~~Lgt~aqNN----p~~Q~~~le~-G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~-~~f~~~------gG~~~L 263 (363)
.+|+++|..+ +..+..+++. |++|.|..++.+++..++..|+.+||+++. ++.+. ..|... +++++|
T Consensus 581 ~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~-~~e~i~~k~~~~~~~~~~~rL~lL 659 (778)
T 3opb_A 581 LALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMS-HPLTIAAKFFNLENPQSLRNFNIL 659 (778)
T ss_dssp HHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHT-SGGGTGGGTSCCSSHHHHHHHHHH
T ss_pred HHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhC-CcHHHHHHHHhhcCchhhccHHHH
Confidence 9999999975 4678888885 999999999999999999999999999997 45554 355432 358899
Q ss_pred HHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhC-CcHHHHHHhccC--CChhHHHHHHHHHHhhcccc
Q 017926 264 QDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDR-FFLKSVVDLTAS--ADLDLQEKVFLEHVFCGLVF 338 (363)
Q Consensus 264 ~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~-g~v~~Lv~lL~~--~d~~lqE~al~aL~~~~~~~ 338 (363)
+.+++++ +..+|+.|+++|++++. .++.....+.+. +++..++.+++. ++.++|..++.++...+.+.
T Consensus 660 V~Ll~s~--D~~~r~AAagALAnLts-----~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~~~ 730 (778)
T 3opb_A 660 VKLLQLS--DVESQRAVAAIFANIAT-----TIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFEVI 730 (778)
T ss_dssp HHGGGCS--CHHHHHHHHHHHHHHHH-----HCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCC--CHHHHHHHHHHHHHhcC-----CChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhh
Confidence 9999886 78899999999999975 255666777776 899999999998 89999999999988555443
No 40
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=98.94 E-value=2.1e-08 Score=104.84 Aligned_cols=211 Identities=14% Similarity=0.118 Sum_probs=161.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCC--CCHHHHHHHHHHHHHHhcc
Q 017926 127 PSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNH--PDTDIRKISAWILGKASQN 204 (363)
Q Consensus 127 ~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s--~~~~Ir~~Aa~~Lgt~aqN 204 (363)
++..+.+....+-+.+ +.-.|||..|+..|..+..+ .+.-+..+|+++|+..|+. .|.++-..+..+|..+...
T Consensus 17 qs~~etI~~L~~Rl~~-~tl~eDRR~Av~~Lk~~sk~---y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~ 92 (651)
T 3grl_A 17 HTEAETIQKLCDRVAS-STLLDDRRNAVRALKSLSKK---YRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISN 92 (651)
T ss_dssp -CHHHHHHHHHHHHHH-CCSHHHHHHHHHHHHHTTTT---TTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCC
T ss_pred CChhhHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHH---hHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCC
Confidence 3567788888888877 44679999999999999654 3445557899999999965 5888888899999887765
Q ss_pred ChH-----------------HHHHHH-HcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcc-cHHHHHhc-CcHHHHH
Q 017926 205 NPL-----------------VQKQVL-ELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLA-GQEMFYVE-AGDLMLQ 264 (363)
Q Consensus 205 Np~-----------------~Q~~~l-e~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~-a~~~f~~~-gG~~~L~ 264 (363)
++. ..+.|+ +.+.++.|+.+|++++-.+|..++..|+.++++.+. .++.+... +|++.|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv 172 (651)
T 3grl_A 93 DEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLM 172 (651)
T ss_dssp C--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHH
T ss_pred CCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHH
Confidence 543 223444 448999999999999989999999999999999888 77888865 9999999
Q ss_pred HhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCCh----hHHHHHHHHHHhhcccccC
Q 017926 265 DILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADL----DLQEKVFLEHVFCGLVFCT 340 (363)
Q Consensus 265 ~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~----~lqE~al~aL~~~~~~~~~ 340 (363)
.+|+++ ...+|..++.+|.+|+. .+++..+.+.-+|..+.|.+++..... .+.+-++..|..+.....+
T Consensus 173 ~lL~d~--rE~iRneallLL~~Lt~-----~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~s 245 (651)
T 3grl_A 173 DLLADS--REVIRNDGVLLLQALTR-----SNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNS 245 (651)
T ss_dssp GGGGCS--SHHHHHHHHHHHHHHHT-----TCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHhCc--hHHHHHHHHHHHHHHhc-----CCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHH
Confidence 999987 46799999999999995 566667777778999999999986432 4555555555532233333
Q ss_pred chhhhhHH
Q 017926 341 CPCIVRGA 348 (363)
Q Consensus 341 ~~~~~r~~ 348 (363)
....||+.
T Consensus 246 NQ~~FrEt 253 (651)
T 3grl_A 246 NQNFFKEG 253 (651)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 44556653
No 41
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=98.86 E-value=2.1e-07 Score=81.83 Aligned_cols=137 Identities=15% Similarity=0.092 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
+...|..|+..|..+-. -+.++.|+.+|+++++.+|..|+++|+.+.. ..+++.|++++
T Consensus 58 ~~~vr~~a~~~L~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l 116 (201)
T 3ltj_A 58 DAWVRRAAADALGQIGD----------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD-----------ERAVEPLIKAL 116 (201)
T ss_dssp SHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHT
T ss_pred CHHHHHHHHHHHHhhCC----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHH
Confidence 34555555555544321 1355666666666666666666666666532 13566666666
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD 305 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~ 305 (363)
.+++..+|..|+++|+.+- . ...++.|..++.++ +..+|..|+..|..+..
T Consensus 117 ~d~~~~vr~~a~~aL~~~~--~---------~~~~~~L~~~l~d~--~~~vr~~A~~aL~~~~~---------------- 167 (201)
T 3ltj_A 117 KDEDWFVRIAAAFALGEIG--D---------ERAVEPLIKALKDE--DGWVRQSAADALGEIGG---------------- 167 (201)
T ss_dssp TCSSHHHHHHHHHHHHHHT--C---------GGGHHHHHHHTTCS--SHHHHHHHHHHHHHHCS----------------
T ss_pred cCCCHHHHHHHHHHHHHhC--C---------HHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCc----------------
Confidence 6666666666666666652 1 23455666666554 44566666666665531
Q ss_pred CCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 306 RFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 306 ~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
...++.|..++..++..+++.|..+|.
T Consensus 168 ~~~~~~L~~~l~d~~~~vr~~A~~aL~ 194 (201)
T 3ltj_A 168 ERVRAAMEKLAETGTGFARKVAVNYLE 194 (201)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 224556666666666667766666665
No 42
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=98.82 E-value=2e-07 Score=82.56 Aligned_cols=137 Identities=15% Similarity=0.092 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
+...+..|+..|..+-. -+.++.|+.+|+++++.+|..|+++|+.+.. .+.++.|++++
T Consensus 63 ~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l 121 (211)
T 3ltm_A 63 DAWVRRAAADALGQIGD----------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD-----------ERAVEPLIKAL 121 (211)
T ss_dssp CHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHT
T ss_pred CHHHHHHHHHHHHhhCC----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHH
Confidence 44555556555554321 2356667777777777777777777776642 24567777777
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD 305 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~ 305 (363)
++++..+|..|+.+|+.+- . ...++.|..+++++ +..+|..|+..|..+..
T Consensus 122 ~d~~~~vr~~a~~aL~~~~--~---------~~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~---------------- 172 (211)
T 3ltm_A 122 KDEDWFVRIAAAFALGEIG--D---------ERAVEPLIKALKDE--DGWVRQSAADALGEIGG---------------- 172 (211)
T ss_dssp TCSSHHHHHHHHHHHHHHC--C---------GGGHHHHHHHTTCS--SHHHHHHHHHHHHHHCS----------------
T ss_pred hCCCHHHHHHHHHHHHHcC--C---------HHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCc----------------
Confidence 7777777777777777761 1 13566677777654 45677777777776641
Q ss_pred CCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 306 RFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 306 ~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
...++.|..++..+++.++..|..+|.
T Consensus 173 ~~~~~~L~~~l~d~~~~vr~~A~~aL~ 199 (211)
T 3ltm_A 173 ERVRAAMEKLAETGTGFARKVAVNYLE 199 (211)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 245667777777777888888888877
No 43
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=98.80 E-value=7.7e-08 Score=85.32 Aligned_cols=152 Identities=15% Similarity=0.100 Sum_probs=124.0
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHH
Q 017926 130 AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQ 209 (363)
Q Consensus 130 ~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q 209 (363)
.+.+...++.|.++ +...|..|+..|..+-+ -++++.|+.+|+++++.+|..|+++|+.+..
T Consensus 18 ~~~~~~L~~~L~~~--~~~vR~~A~~~L~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~------ 79 (211)
T 3ltm_A 18 PEKVEMYIKNLQDD--SYYVRRAAAYALGKIGD----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD------ 79 (211)
T ss_dssp GGGHHHHHHHTTCS--SHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC------
T ss_pred HhHHHHHHHHHcCC--CHHHHHHHHHHHHHhCC----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC------
Confidence 34456666666643 67888889888887533 3578999999999999999999999998863
Q ss_pred HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 210 KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 210 ~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
.+.++.|+++|.+++..+|..|+++|+.+- . ...++.|+.++.++ +..+|..|+..|..+..
T Consensus 80 -----~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~--~---------~~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~ 141 (211)
T 3ltm_A 80 -----ERAVEPLIKALKDEDGWVRQSAAVALGQIG--D---------ERAVEPLIKALKDE--DWFVRIAAAFALGEIGD 141 (211)
T ss_dssp -----GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC--C---------GGGHHHHHHHTTCS--SHHHHHHHHHHHHHHCC
T ss_pred -----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC--c---------HHHHHHHHHHHhCC--CHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999873 2 24678899999876 67799999999998852
Q ss_pred hhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 290 CQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 290 ~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
...++.|..+|..++..++..++.+|..
T Consensus 142 ----------------~~~~~~L~~~l~d~~~~vr~~a~~aL~~ 169 (211)
T 3ltm_A 142 ----------------ERAVEPLIKALKDEDGWVRQSAADALGE 169 (211)
T ss_dssp ----------------GGGHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 2478899999998899999999999883
No 44
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=98.75 E-value=2e-08 Score=106.16 Aligned_cols=152 Identities=12% Similarity=0.071 Sum_probs=121.4
Q ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH-HhhcCCCHHHHHHHHHHHHHHhcC-CcccHH
Q 017926 175 GLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLM-KMVKSSFVEEAVKALYTVSSLIRN-NLAGQE 252 (363)
Q Consensus 175 gl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll-~LL~s~~~~v~~kAL~ALSsLiR~-~~~a~~ 252 (363)
.+.|+++.|++++++.|..||++|+++++ ++..+..+++.|+++.++ .+|.+++.++|..|.+||.+|+.+ .+....
T Consensus 35 ~i~Pll~~L~S~~~~~r~~A~~al~~l~~-~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~ 113 (684)
T 4gmo_A 35 KILPVLKDLKSPDAKSRTTAAGAIANIVQ-DAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCV 113 (684)
T ss_dssp TTHHHHHHHSSSCCSHHHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHc-CcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHH
Confidence 57789999999999999999999999997 788999999999998865 578888899999999999999875 456677
Q ss_pred HHHhcCcHHHHHHhhcCCC------------ccH-------HHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHH
Q 017926 253 MFYVEAGDLMLQDILGNSS------------FEI-------RLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVV 313 (363)
Q Consensus 253 ~f~~~gG~~~L~~lL~s~~------------~~~-------klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv 313 (363)
.+++.|+++.|..+++... ... .+...++.+|.+|+. ...+....+...+.++.|+
T Consensus 114 ~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e-----~s~~~~~~v~~~~~l~~l~ 188 (684)
T 4gmo_A 114 HLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLAL-----ARDEIHEAVATKQTILRLL 188 (684)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHH-----HCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHh-----CCHHHHHHHHhcccHHHHH
Confidence 7888999999998875310 000 122346678888885 2445566778889999999
Q ss_pred HhccCC---ChhHHHHHHHHHH
Q 017926 314 DLTASA---DLDLQEKVFLEHV 332 (363)
Q Consensus 314 ~lL~~~---d~~lqE~al~aL~ 332 (363)
.+|... ..+++..++.+|.
T Consensus 189 ~~L~~~~~~~~~v~~~a~~~L~ 210 (684)
T 4gmo_A 189 FRLISADIAPQDIYEEAISCLT 210 (684)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHH
T ss_pred HHHHhcCCCcHHHHHHHHHHHH
Confidence 998543 4689999999987
No 45
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=98.75 E-value=1.6e-07 Score=82.68 Aligned_cols=151 Identities=16% Similarity=0.127 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHH
Q 017926 129 DAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLV 208 (363)
Q Consensus 129 d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~ 208 (363)
+.......++.|.++ +.+.|..|+..|..+-. -+.++.|+.+|+++++.+|..|+++|+.+..
T Consensus 12 ~~~~~~~~i~~L~~~--~~~vr~~A~~~L~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~----- 74 (201)
T 3ltj_A 12 DPEKVEMYIKNLQDD--SYYVRRAAAYALGKIGD----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD----- 74 (201)
T ss_dssp CHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-----
T ss_pred CCcchHHHHHHhcCC--CHHHHHHHHHHHHhcCC----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC-----
Confidence 444555666666654 56778888888876532 2578999999999999999999999998753
Q ss_pred HHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHh
Q 017926 209 QKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLA 288 (363)
Q Consensus 209 Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~ 288 (363)
..+++.|+++|.++++.+|..|+++|+.+- . ...++.|..++.++ +..+|..|++.+..+.
T Consensus 75 ------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~--~---------~~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~ 135 (201)
T 3ltj_A 75 ------ERAVEPLIKALKDEDGWVRQSAAVALGQIG--D---------ERAVEPLIKALKDE--DWFVRIAAAFALGEIG 135 (201)
T ss_dssp ------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC--C---------GGGHHHHHHHTTCS--SHHHHHHHHHHHHHHT
T ss_pred ------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC--c---------HHHHHHHHHHHcCC--CHHHHHHHHHHHHHhC
Confidence 257899999999999999999999999873 2 24678889999876 6779999999998885
Q ss_pred hhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHH
Q 017926 289 KCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEH 331 (363)
Q Consensus 289 ~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL 331 (363)
. ...++.|..+|..++..++..++.+|
T Consensus 136 ~----------------~~~~~~L~~~l~d~~~~vr~~A~~aL 162 (201)
T 3ltj_A 136 D----------------ERAVEPLIKALKDEDGWVRQSAADAL 162 (201)
T ss_dssp C----------------GGGHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred C----------------HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 2 35778889999888888888887665
No 46
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=98.69 E-value=8.7e-08 Score=101.31 Aligned_cols=167 Identities=14% Similarity=0.057 Sum_probs=134.3
Q ss_pred HHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHH-HhcCCCCHHHHHHHHHHHHHHhcc-ChHHHHHHH
Q 017926 136 AIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLV-GQLNHPDTDIRKISAWILGKASQN-NPLVQKQVL 213 (363)
Q Consensus 136 al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li-~lL~s~~~~Ir~~Aa~~Lgt~aqN-Np~~Q~~~l 213 (363)
.++.|.++ +.++|..|+..|..++++-.+...+.+.|++.+++ .+|.+++.+||..|+++|++++.. .+.+...++
T Consensus 39 ll~~L~S~--~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~ 116 (684)
T 4gmo_A 39 VLKDLKSP--DAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCVHLY 116 (684)
T ss_dssp HHHHHSSS--CCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHcCCC--CHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHHHHH
Confidence 34455543 56789999999999999877888899999999876 578999999999999999999985 688999999
Q ss_pred HcCcHHHHHHhhcCCCH---------------------HHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcC-CC
Q 017926 214 ELGALSKLMKMVKSSFV---------------------EEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGN-SS 271 (363)
Q Consensus 214 e~G~lp~Ll~LL~s~~~---------------------~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s-~~ 271 (363)
+.|++++|+.++++... .+...++++|.+++.++..+...+...++++.|+.+|.+ +.
T Consensus 117 ~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~~~ 196 (684)
T 4gmo_A 117 RLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLISADI 196 (684)
T ss_dssp HTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHHCC
T ss_pred HcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhcCC
Confidence 99999999999853211 123467888899998888888899999999999888743 33
Q ss_pred ccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcH
Q 017926 272 FEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFL 309 (363)
Q Consensus 272 ~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v 309 (363)
.+..++..|+.+|..|+. .++.....+.+.+..
T Consensus 197 ~~~~v~~~a~~~L~~ls~-----dn~~~~~~i~~~~~~ 229 (684)
T 4gmo_A 197 APQDIYEEAISCLTTLSE-----DNLKVGQAITDDQET 229 (684)
T ss_dssp SCHHHHHHHHHHHHHHHT-----TCHHHHHHHHTCCSS
T ss_pred CcHHHHHHHHHHHHHHhc-----cCHHHHHHHHhcchH
Confidence 456799999999999985 355666677766643
No 47
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=98.61 E-value=1.4e-06 Score=80.47 Aligned_cols=120 Identities=9% Similarity=0.088 Sum_probs=91.1
Q ss_pred hcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHH
Q 017926 182 QLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDL 261 (363)
Q Consensus 182 lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~ 261 (363)
+++++++.+|..|+++|+.+...++.... ..+|.|+.++++++..+|..|+++|+.+-. ...++
T Consensus 99 ~~~d~~~~vr~~a~~aL~~l~~~~~~~~~-----~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~-----------~~~~~ 162 (280)
T 1oyz_A 99 ALNDKSACVRATAIESTAQRCKKNPIYSP-----KIVEQSQITAFDKSTNVRRATAFAISVIND-----------KATIP 162 (280)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHTTCSCHHHHHHHHHHHHTC--------------CCHH
T ss_pred HhcCCCHHHHHHHHHHHHHHhccCCcccH-----HHHHHHHHHhhCCCHHHHHHHHHHHHhcCC-----------HHHHH
Confidence 34677888888888888888766654333 457888888888888888888888887632 24788
Q ss_pred HHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 262 MLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 262 ~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
.|+.+++++ +..+|..|++.|..+.. + ...+++.|+.+|..++..++..++.+|..
T Consensus 163 ~L~~~l~d~--~~~vr~~a~~aL~~~~~------~--------~~~~~~~L~~~l~d~~~~vR~~A~~aL~~ 218 (280)
T 1oyz_A 163 LLINLLKDP--NGDVRNWAAFAININKY------D--------NSDIRDCFVEMLQDKNEEVRIEAIIGLSY 218 (280)
T ss_dssp HHHHHHTCS--SHHHHHHHHHHHHHHTC------C--------CHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHcCC--CHHHHHHHHHHHHhhcc------C--------cHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 888988876 56689999999887742 1 12467889999998899999999999883
No 48
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=98.59 E-value=1.8e-06 Score=79.69 Aligned_cols=144 Identities=10% Similarity=0.026 Sum_probs=107.8
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
+...+..++..|..+..... ...-..++.|+.+|+++++.+|..|+++|+.+.. .+++|.|+.++
T Consensus 104 ~~~vr~~a~~aL~~l~~~~~----~~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~-----------~~~~~~L~~~l 168 (280)
T 1oyz_A 104 SACVRATAIESTAQRCKKNP----IYSPKIVEQSQITAFDKSTNVRRATAFAISVIND-----------KATIPLLINLL 168 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHCG----GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC--------------CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCC----cccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC-----------HHHHHHHHHHH
Confidence 45566666666665432110 0112357888899999999999999999997653 25899999999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD 305 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~ 305 (363)
++++..+|..|+++|+.+-.+.+ ..++.|..+++++ +..+|..|++.|..+. +
T Consensus 169 ~d~~~~vr~~a~~aL~~~~~~~~---------~~~~~L~~~l~d~--~~~vR~~A~~aL~~~~----------------~ 221 (280)
T 1oyz_A 169 KDPNGDVRNWAAFAININKYDNS---------DIRDCFVEMLQDK--NEEVRIEAIIGLSYRK----------------D 221 (280)
T ss_dssp TCSSHHHHHHHHHHHHHHTCCCH---------HHHHHHHHHTTCS--CHHHHHHHHHHHHHTT----------------C
T ss_pred cCCCHHHHHHHHHHHHhhccCcH---------HHHHHHHHHhcCC--CHHHHHHHHHHHHHhC----------------C
Confidence 99999999999999998842222 3567899999876 5779999999988775 2
Q ss_pred CCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 306 RFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 306 ~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
...++.|+.+|..++ ++..++.+|..
T Consensus 222 ~~~~~~L~~~l~d~~--vr~~a~~aL~~ 247 (280)
T 1oyz_A 222 KRVLSVLCDELKKNT--VYDDIIEAAGE 247 (280)
T ss_dssp GGGHHHHHHHHTSSS--CCHHHHHHHHH
T ss_pred HhhHHHHHHHhcCcc--HHHHHHHHHHh
Confidence 357899999998654 88889999884
No 49
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=98.35 E-value=2.5e-05 Score=75.83 Aligned_cols=193 Identities=17% Similarity=0.102 Sum_probs=149.6
Q ss_pred CHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH-cccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccCh
Q 017926 128 SDAQLIQIAIDDLNNSTLSLEDSQRALQELLI-LVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNP 206 (363)
Q Consensus 128 ~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~-Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp 206 (363)
++.....++++.|.+. +.+++..+|-.|.. +-++.+.|..|+..+|+..|+......+.+.+.++..+++.+.- +.
T Consensus 115 sps~ra~~iiekL~~~--~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~-~v 191 (339)
T 3dad_A 115 QLSVRVNAILEKLYSS--SGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLML-FV 191 (339)
T ss_dssp CHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTT-SH
T ss_pred CcHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHh-cc
Confidence 4556677888888854 57889999999999 55789999999999999999999999999999999999999986 44
Q ss_pred HHHHHHHH-cCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhc-------Cc---HHHHHHhhcCC-CccH
Q 017926 207 LVQKQVLE-LGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVE-------AG---DLMLQDILGNS-SFEI 274 (363)
Q Consensus 207 ~~Q~~~le-~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~-------gG---~~~L~~lL~s~-~~~~ 274 (363)
.--+.+++ ...|..|..++.+....+...|+.-|-++|-..+.+...+.+. .| ++-|+.+|++. ..+.
T Consensus 192 ~Gm~gvvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~ 271 (339)
T 3dad_A 192 DGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADP 271 (339)
T ss_dssp HHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCH
T ss_pred ccccchhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCH
Confidence 45555554 3688899999998777888888888888888776665555442 23 88999999732 2477
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCC----CcchhHHhCCcHHHHHHhccCC--ChhHHHH
Q 017926 275 RLHRKAVSLVGDLAKCQLENMHK----VEPPLFRDRFFLKSVVDLTASA--DLDLQEK 326 (363)
Q Consensus 275 klr~kA~~lL~~L~~~~~~~~~~----~~~~~l~~~g~v~~Lv~lL~~~--d~~lqE~ 326 (363)
.++.+|..||..+.... .+. +....+.+.|+=..+..++++. |++++++
T Consensus 272 elq~~amtLIN~lL~~a---pd~d~~~di~d~Le~~gi~~~i~r~l~~~~~~~~l~~Q 326 (339)
T 3dad_A 272 ELLVYTVTLINKTLAAL---PDQDSFYDVTDALEQQGMEALVQRHLGTAGTDVDLRTQ 326 (339)
T ss_dssp HHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHTTHHHHHHHHHSCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC---CChhHHHHHHHHHHHccHHHHHHHHHhccCCCHHHHHH
Confidence 89999999999998641 111 2345566778877788878765 7777765
No 50
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=98.33 E-value=7.5e-06 Score=74.45 Aligned_cols=171 Identities=9% Similarity=0.055 Sum_probs=126.3
Q ss_pred CCCHHHHHHHHHHHHHcccC-CCc-hhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHH
Q 017926 144 TLSLEDSQRALQELLILVEP-IDN-ANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQNN-PLVQKQVLELGALS 219 (363)
Q Consensus 144 ~~s~e~k~~AL~~L~~Lve~-iDn-An~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp 219 (363)
+.+-..|..|+..|..+++. .+. ..++.+ .++.|..+|. ..+..+|..|+.+++.++..- +....++ ...+|
T Consensus 26 s~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~--i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~--~~ilp 101 (242)
T 2qk2_A 26 EKKWTLRKESLEVLEKLLTDHPKLENGEYGA--LVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYA--SACVP 101 (242)
T ss_dssp CSSHHHHHHHHHHHHHHHHHCSSBCCCCCHH--HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHH--HHHHH
T ss_pred cCCHHHHHHHHHHHHHHHccCCCCCCCCHHH--HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHH--HHHHH
Confidence 34678899999999998875 221 223333 3667788884 899999999999999999631 1122211 24799
Q ss_pred HHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCC-
Q 017926 220 KLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKV- 298 (363)
Q Consensus 220 ~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~- 298 (363)
.|+..+.+.+..+|..|..||.+++...+ ... -++.|...++++ +.++|..++.+|..++.. ..++
T Consensus 102 ~ll~~l~d~~~~vr~~a~~aL~~~~~~~~--~~~-----ll~~l~~~l~~~--~~~vr~~~l~~l~~~l~~----~~~~~ 168 (242)
T 2qk2_A 102 SLLEKFKEKKPNVVTALREAIDAIYASTS--LEA-----QQESIVESLSNK--NPSVKSETALFIARALTR----TQPTA 168 (242)
T ss_dssp HHHHGGGCCCHHHHHHHHHHHHHHHTTSC--HHH-----HHHHHHHHTTCS--CHHHHHHHHHHHHHHHTT----CCGGG
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHcCC--HHH-----HHHHHHHHHcCC--ChHHHHHHHHHHHHHHHH----cCCCC
Confidence 99999999999999999999999987643 222 345677778876 568999999999997642 2222
Q ss_pred -cchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 299 -EPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 299 -~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
....+ ..+++.|+.+|...+..+|+.|..++..
T Consensus 169 ~~~~~l--~~l~p~l~~~l~D~~~~VR~~A~~~l~~ 202 (242)
T 2qk2_A 169 LNKKLL--KLLTTSLVKTLNEPDPTVRDSSAEALGT 202 (242)
T ss_dssp CCHHHH--HHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccHHHH--HHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 22333 3689999999998999999999999883
No 51
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.28 E-value=1.7e-05 Score=79.67 Aligned_cols=174 Identities=10% Similarity=-0.006 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHh
Q 017926 145 LSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKM 224 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~L 224 (363)
.+.+.|..|++.|..+++..... ...-..+|.+..+++++++.+|..|+.+++.+++..+.- ......+|.+.++
T Consensus 176 ~~~~VR~~a~~~l~~l~~~~~~~--~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~~ 250 (588)
T 1b3u_A 176 DTPMVRRAAASKLGEFAKVLELD--NVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQE---DLEALVMPTLRQA 250 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHTSCHH--HHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHH---HHHHHTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcHH--hHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHH
Confidence 46788999999999988776532 223356778888999999999999999999999865531 2234578999999
Q ss_pred hcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHH
Q 017926 225 VKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFR 304 (363)
Q Consensus 225 L~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~ 304 (363)
+++++..+|..|+.+|+.++....+ ......-++.+..+++++ +..+|..++..+..++.. ..+.......
T Consensus 251 ~~d~~~~vR~~a~~~l~~l~~~~~~---~~~~~~l~~~l~~~l~d~--~~~vr~~a~~~l~~~~~~----~~~~~~~~~~ 321 (588)
T 1b3u_A 251 AEDKSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCEN----LSADCRENVI 321 (588)
T ss_dssp HTCSSHHHHHHHHHTHHHHHHHHCH---HHHHHTHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHT----SCTTTHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCc---ccchhHHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHH----hChhhhhhHH
Confidence 9888888999999999999875322 122345578888989876 567999999999999863 2222121122
Q ss_pred hCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 305 DRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 305 ~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
-..+++.+..+++..+..+|..++.+|.
T Consensus 322 ~~~l~p~l~~~l~d~~~~vR~~a~~~l~ 349 (588)
T 1b3u_A 322 MSQILPCIKELVSDANQHVKSALASVIM 349 (588)
T ss_dssp HHTHHHHHHHHHTCSCHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 3456677777777777788877777766
No 52
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=98.26 E-value=1.4e-07 Score=78.40 Aligned_cols=118 Identities=9% Similarity=0.022 Sum_probs=87.5
Q ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHH
Q 017926 174 GGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEM 253 (363)
Q Consensus 174 Ggl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~ 253 (363)
..++.++.+|+++++.+|..|+++|+.+.. ..++.|+++|++++..+|..|+++|+.+- .+
T Consensus 12 ~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~------------~~~~~L~~~L~d~~~~vR~~A~~aL~~~~--~~----- 72 (131)
T 1te4_A 12 SGLVPRGSHMADENKWVRRDVSTALSRMGD------------EAFEPLLESLSNEDWRIRGAAAWIIGNFQ--DE----- 72 (131)
T ss_dssp ---------CCSSCCCSSSSCCSSTTSCSS------------TTHHHHHHGGGCSCHHHHHHHHHHHGGGC--SH-----
T ss_pred ccHHHHHHHhcCCCHHHHHHHHHHHHHhCc------------hHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CH-----
Confidence 457788899999999999999999986542 12689999999888899999999998873 11
Q ss_pred HHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 254 FYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 254 f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
..++.|..+|+++ +..+|..|++.|..+.. ...++.|..+|+.+|..++..+..+|.
T Consensus 73 ----~a~~~L~~~L~d~--~~~VR~~A~~aL~~~~~----------------~~a~~~L~~~l~d~~~~vr~~A~~aL~ 129 (131)
T 1te4_A 73 ----RAVEPLIKLLEDD--SGFVRSGAARSLEQIGG----------------ERVRAAMEKLAETGTGFARKVAVNYLE 129 (131)
T ss_dssp ----HHHHHHHHHHHHC--CTHHHHHHHHHHHHHCS----------------HHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred ----HHHHHHHHHHcCC--CHHHHHHHHHHHHHhCc----------------HHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 2478888888765 56789999999888752 246788899998889999999998875
No 53
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.22 E-value=1.2e-05 Score=80.67 Aligned_cols=169 Identities=9% Similarity=-0.008 Sum_probs=123.0
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
+...|..+++.+..+++..... +..-..++.++.+|++++..||..|+.+++.++..... .+.....+|.|+.++
T Consensus 415 ~~~vr~~~~~~l~~l~~~~~~~--~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~---~~~~~~llp~l~~~~ 489 (588)
T 1b3u_A 415 KWRVRLAIIEYMPLLAGQLGVE--FFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGK---EWAHATIIPKVLAMS 489 (588)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGG--GCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH---HHHHHHTHHHHHHTT
T ss_pred CchHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhCc---hhHHHHHHHHHHHHh
Confidence 4456666777776665433211 11112467788899999999999999999999875332 122346789999998
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD 305 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~ 305 (363)
.+++..+|..++.+++.+++.... .++...-++.|..+++++ +..+|..++.++..++.. .+ ..+..
T Consensus 490 ~~~~~~~R~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~d~--~~~Vr~~a~~~l~~l~~~----~~----~~~~~ 556 (588)
T 1b3u_A 490 GDPNYLHRMTTLFCINVLSEVCGQ---DITTKHMLPTVLRMAGDP--VANVRFNVAKSLQKIGPI----LD----NSTLQ 556 (588)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHH---HHHHHHTHHHHHHGGGCS--CHHHHHHHHHHHHHHGGG----SC----HHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHhhCCCC--CchHHHHHHHHHHHHHHH----hc----hhhhH
Confidence 888888999999999999875332 233345678888888876 567999999999999853 11 22334
Q ss_pred CCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 306 RFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 306 ~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
..+++.|..++...|.++|+.|..|+.
T Consensus 557 ~~~~p~l~~l~~d~d~~vr~~a~~al~ 583 (588)
T 1b3u_A 557 SEVKPILEKLTQDQDVDVKYFAQEALT 583 (588)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHH
Confidence 567777888777779999999999987
No 54
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=98.21 E-value=4.7e-06 Score=79.76 Aligned_cols=137 Identities=16% Similarity=0.207 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHH--hcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHc--CcHHHHH
Q 017926 147 LEDSQRALQELLILVEPIDNANDLSKLGGLSVLVG--QLNHPDTDIRKISAWILGKASQNNPLVQKQVLEL--GALSKLM 222 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~--lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~--G~lp~Ll 222 (363)
.+....||+.|+++.+++...-.|.... +..|-. |..+..+.+|..|+.+||.+.+|||.+-+.|.+. ..+..+.
T Consensus 42 ~~~le~aLD~L~ElSHDi~~G~KI~~~e-f~lL~nL~~~~~~~~~~rE~aarII~ssLRNNP~Al~~V~~~~p~fv~~lf 120 (315)
T 3qml_C 42 IARLEDSFDRIMEFAHDYKHGYKIITHE-FALLANLSLNENLPLTLRELSTRVITSCLRNNPPVVEFINESFPNFKSKIM 120 (315)
T ss_dssp HHHHHHHHHHHGGGTTSHHHHHHHHHHH-HHHHHHHHHCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHhhhHHHhCc-HHHHHHHHhhccCChhHHHHHHHHHHHHHccCHHHHHHHHHhChhHHHHHH
Confidence 4556789999999999999988888653 455544 3456788999999999999999999999988875 4444444
Q ss_pred Hhh----cC---CCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 223 KMV----KS---SFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 223 ~LL----~s---~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
.-| .. ....++..-+++|..|+.+. ..| ...|+..|..++...+.+..+|+|++-++.++-.
T Consensus 121 ~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~----~~F-~~~~m~~L~~ly~~~~~d~~~k~Kvl~li~d~f~ 189 (315)
T 3qml_C 121 AALSNLNDSNHRSSNILIKRYLSILNELPVTS----EDL-PIYSTVVLQNVYERNNKDKQLQIKVLELISKILK 189 (315)
T ss_dssp HHHHHHHCC--CCCHHHHHHHHHHHHHSCCCS----TTC---CCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHHhcCh----Hhh-hhccHHHHHHHHccCCCCHHHHHHHHHHHHHHcc
Confidence 333 22 23455677899999999874 224 3568888888876543367799999999999874
No 55
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=98.19 E-value=3.2e-06 Score=90.37 Aligned_cols=171 Identities=13% Similarity=0.056 Sum_probs=116.7
Q ss_pred HHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCC
Q 017926 150 SQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSF 229 (363)
Q Consensus 150 k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~ 229 (363)
|..|...|..+++... ..+.. ..++.+..+|++++..+|..|+++||.++...++.-.. .-.+.+|.|+.++++++
T Consensus 338 r~~a~~~L~~la~~~~--~~~~~-~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~-~l~~~l~~l~~~l~d~~ 413 (852)
T 4fdd_A 338 RKCSAAALDVLANVYR--DELLP-HILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIP-YLPELIPHLIQCLSDKK 413 (852)
T ss_dssp HHHHHHHHHHHHHHHG--GGGHH-HHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGG-GHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHHhcc--HHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHH-HHHHHHHHHHHHcCCCC
Confidence 4455555555544322 12221 24666677888999999999999999999876642222 22468999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcH
Q 017926 230 VEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFL 309 (363)
Q Consensus 230 ~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v 309 (363)
..+|..|+++|+.+....++....-+-.+-++.|...+.++ +.++|..|++++.+++... .+...+.+ ..++
T Consensus 414 ~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~--~~~vr~~a~~aL~~l~~~~----~~~l~~~l--~~ll 485 (852)
T 4fdd_A 414 ALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDS--NKRVQEAACSAFATLEEEA----CTELVPYL--AYIL 485 (852)
T ss_dssp HHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHHH----GGGGGGGH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHh----hHhhHhHH--HHHH
Confidence 99999999999998875332111111124567888888775 5689999999999999642 22333333 4677
Q ss_pred HHHHHhccCCChhHHHHHHHHHH
Q 017926 310 KSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 310 ~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
+.|+.+++..+......++.++.
T Consensus 486 ~~L~~~l~~~~~~~~~~~~~ai~ 508 (852)
T 4fdd_A 486 DTLVFAFSKYQHKNLLILYDAIG 508 (852)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHHHHHHHH
Confidence 88888887666666555666655
No 56
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=98.18 E-value=3.2e-05 Score=79.91 Aligned_cols=160 Identities=16% Similarity=0.154 Sum_probs=114.5
Q ss_pred HhHHHHHHHHHHc-CCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHH
Q 017926 112 KRQMEIKELMEKL-KTPSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDI 190 (363)
Q Consensus 112 ~r~~~Lkeal~~l-~~~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~I 190 (363)
+|.+-+++++-.+ .|.+-.......++.+.+ .+.+.|..+.-.+..+.+.. .++. +-.+..+.+.|+++++.+
T Consensus 29 ~k~~~~~kli~~~~~G~d~~~~~~~vi~l~~s--~~~~~Krl~yl~l~~~~~~~---~e~~-~l~~n~l~kdL~~~n~~i 102 (591)
T 2vgl_B 29 KRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT--DNLELKKLVYLYLMNYAKSQ---PDMA-IMAVNSFVKDCEDPNPLI 102 (591)
T ss_dssp HHHHHHHHHHHHHHTTCCCGGGHHHHHHTTSS--SCHHHHHHHHHHHHHHHHHS---HHHH-HTTHHHHGGGSSSSSHHH
T ss_pred HHHHHHHHHHHHHHCCCChHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcccC---chHH-HHHHHHHHHHcCCCCHHH
Confidence 4666666665443 344433445556665443 35677766666666655421 1221 234567778899999999
Q ss_pred HHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCC
Q 017926 191 RKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNS 270 (363)
Q Consensus 191 r~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~ 270 (363)
|..|..+||++. +|+..+. .+|.+.+++.++++.+|.+|+.|+..+.+.+|.... +.+-++.|..+|.++
T Consensus 103 r~~AL~~L~~i~--~~~~~~~-----l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~---~~~~~~~l~~lL~d~ 172 (591)
T 2vgl_B 103 RALAVRTMGCIR--VDKITEY-----LCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVE---DQGFLDSLRDLIADS 172 (591)
T ss_dssp HHHHHHHHHTCC--SGGGHHH-----HHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHH---HHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHcCC--hHHHHHH-----HHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhcc---cccHHHHHHHHhCCC
Confidence 999999999886 5555444 468899999999999999999999999998776442 345678999999876
Q ss_pred CccHHHHHHHHHHHHHHhh
Q 017926 271 SFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 271 ~~~~klr~kA~~lL~~L~~ 289 (363)
+..++..|+.++..++.
T Consensus 173 --d~~V~~~A~~aL~~i~~ 189 (591)
T 2vgl_B 173 --NPMVVANAVAALSEISE 189 (591)
T ss_dssp --CHHHHHHHHHHHHHHTT
T ss_pred --ChhHHHHHHHHHHHHHh
Confidence 67799999999999985
No 57
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=98.13 E-value=4e-05 Score=71.02 Aligned_cols=178 Identities=10% Similarity=0.027 Sum_probs=128.3
Q ss_pred CCCHHHHHHHHHHHHH-cccC-CCc---hhhHHhcCCHHHHHHhc-CCCCHHHHHHHHHHHHHHhccC--hHHH-HHHHH
Q 017926 144 TLSLEDSQRALQELLI-LVEP-IDN---ANDLSKLGGLSVLVGQL-NHPDTDIRKISAWILGKASQNN--PLVQ-KQVLE 214 (363)
Q Consensus 144 ~~s~e~k~~AL~~L~~-Lve~-iDn---An~l~~lGgl~~Li~lL-~s~~~~Ir~~Aa~~Lgt~aqNN--p~~Q-~~~le 214 (363)
+..-.+|..|++.|.. +++. .+. ..++..+ +..|...| +..+..+|..|+.+|+.++..- +..+ .+..
T Consensus 27 s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~--~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y~~- 103 (249)
T 2qk1_A 27 SSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNL--LGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDYVS- 103 (249)
T ss_dssp CSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHH--HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHHHH-
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHH--HHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHHHH-
Confidence 4467889999999999 8854 121 2233333 66777888 7889999999999999999531 3333 3222
Q ss_pred cCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhc
Q 017926 215 LGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLEN 294 (363)
Q Consensus 215 ~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~ 294 (363)
-.+|.++..+++....|+..+.+|+-+++.+.++....-+-..-++.|...|+++ +..+|.-++.+|..++..
T Consensus 104 -~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k--~~~vk~~al~~l~~~~~~---- 176 (249)
T 2qk1_A 104 -LVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHK--TPQIRMECTQLFNASMKE---- 176 (249)
T ss_dssp -HHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCS--SHHHHHHHHHHHHHHHHH----
T ss_pred -HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCC--ChHHHHHHHHHHHHHHHH----
Confidence 3799999999998889999999999999986533110000012456778888887 567999999999999863
Q ss_pred CCCCcchh---HHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 295 MHKVEPPL---FRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 295 ~~~~~~~~---l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.+..... .....+++.|..++...+.++|+.|..++.
T Consensus 177 -~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~ 216 (249)
T 2qk1_A 177 -EKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFA 216 (249)
T ss_dssp -CCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred -cCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 2221122 223679999999999999999999999988
No 58
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=98.12 E-value=7.3e-05 Score=77.22 Aligned_cols=159 Identities=15% Similarity=0.129 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHcccC-CCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 147 LEDSQRALQELLILVEP-IDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lve~-iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
.+.|..++..+.++.-. .|. -.+++.+++++.+++..+|..+...+..++..+|+... -+++.|.+-|
T Consensus 27 ~~~k~~~~~kli~~~~~G~d~------~~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~e~~~-----l~~n~l~kdL 95 (591)
T 2vgl_B 27 KEKRKEAVKKVIAAMTVGKDV------SSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAI-----MAVNSFVKDC 95 (591)
T ss_dssp HHHHHHHHHHHHHHHHTTCCC------GGGHHHHHHTTSSSCHHHHHHHHHHHHHHHHHSHHHHH-----TTHHHHGGGS
T ss_pred HHHHHHHHHHHHHHHHCCCCh------HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccCchHHH-----HHHHHHHHHc
Confidence 45566666555553322 221 23678899999999999999999999999887765432 3567888889
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD 305 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~ 305 (363)
.++++.+|..|+.+|+++. .+.....+ ++.+..++.++ +..+|.+|+.++..++. .+++ .+.+
T Consensus 96 ~~~n~~ir~~AL~~L~~i~--~~~~~~~l-----~~~l~~~L~d~--~~~VRk~A~~al~~i~~-----~~p~---~~~~ 158 (591)
T 2vgl_B 96 EDPNPLIRALAVRTMGCIR--VDKITEYL-----CEPLRKCLKDE--DPYVRKTAAVCVAKLHD-----INAQ---MVED 158 (591)
T ss_dssp SSSSHHHHHHHHHHHHTCC--SGGGHHHH-----HHHHHHHSSCS--CHHHHHHHHHHHHHHHH-----SSCC---CHHH
T ss_pred CCCCHHHHHHHHHHHHcCC--hHHHHHHH-----HHHHHHHcCCC--ChHHHHHHHHHHHHHHh-----hChh---hccc
Confidence 9989999999999999984 34333332 46788888876 67899999999999985 2444 3344
Q ss_pred CCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 306 RFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 306 ~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
.++++.+..+|...|+.++..|+.+|.-
T Consensus 159 ~~~~~~l~~lL~d~d~~V~~~A~~aL~~ 186 (591)
T 2vgl_B 159 QGFLDSLRDLIADSNPMVVANAVAALSE 186 (591)
T ss_dssp HHHHHHHHHTTSCSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhCCCChhHHHHHHHHHHH
Confidence 6899999999998899999999999883
No 59
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=98.11 E-value=0.00014 Score=67.38 Aligned_cols=180 Identities=12% Similarity=0.111 Sum_probs=139.2
Q ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHh-cCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHH
Q 017926 132 LIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSK-LGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQK 210 (363)
Q Consensus 132 lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~-lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~ 210 (363)
.....++.|. +.+...+..+|..|++++...|-.-+... -.+++.++.++.+.|..+-..|..||+++..+.|-.-+
T Consensus 34 ~l~~L~~LL~--dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~ 111 (265)
T 3b2a_A 34 ALFLILELAG--EDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSK 111 (265)
T ss_dssp HHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHH
T ss_pred HHHHHHHHHh--ccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHH
Confidence 3444445553 34678899999999999998754444433 35899999999999999999999999999999998888
Q ss_pred HHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 211 QVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 211 ~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.+.+ .+..|..++++.+.-.+..|.-.++.+ +--.+. -+-+..|.+++.|+ +.++|.-+..++.+++..
T Consensus 112 ~y~K--l~~aL~dlik~~~~il~~eaae~Lgkl-kv~~~~------~~V~~~l~sLl~Sk--d~~vK~agl~~L~eia~~ 180 (265)
T 3b2a_A 112 TFLK--AAKTLVSLLESPDDMMRIETIDVLSKL-QPLEDS------KLVRTYINELVVSP--DLYTKVAGFCLFLNMLNS 180 (265)
T ss_dssp HHHH--HHHHHHHHTTSCCHHHHHHHHHHHHHC-CBSCCC------HHHHHHHHHHHTCS--SHHHHHHHHHHHHHHGGG
T ss_pred HHHH--HHHHHHHHhcCCCchHHHHHHHHhCcC-Ccccch------HHHHHHHHHHHhCC--ChhHHHHHHHHHHHhhcc
Confidence 8765 468888999988887888888888888 211111 13467899999776 778888999999999864
Q ss_pred hhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 291 QLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 291 ~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
..|+.... +++.-+.++|++.|+.++|+|+.++.
T Consensus 181 ---S~D~~i~~-----~I~~eI~elL~~eD~~l~e~aLd~Le 214 (265)
T 3b2a_A 181 ---SADSGHLT-----LILDEIPSLLQNDNEFIVELALDVLE 214 (265)
T ss_dssp ---CSSCCCGG-----GTTTTHHHHHTCSCHHHHHHHHHHHH
T ss_pred ---cCCHHHHH-----HHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 23444443 45566789999999999999999987
No 60
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=98.05 E-value=2.1e-05 Score=84.06 Aligned_cols=176 Identities=13% Similarity=0.066 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHcccCCCchhhHHh--cCCHHHHHHhc-----------CC-----------CCHHHHHHHHHHHHH
Q 017926 145 LSLEDSQRALQELLILVEPIDNANDLSK--LGGLSVLVGQL-----------NH-----------PDTDIRKISAWILGK 200 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~iDnAn~l~~--lGgl~~Li~lL-----------~s-----------~~~~Ir~~Aa~~Lgt 200 (363)
.+.+.+..|++.+..+++.....+.+.. -..+|.++..+ .. .+-.+|..|+.+|+.
T Consensus 268 ~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~ 347 (852)
T 4fdd_A 268 QDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDV 347 (852)
T ss_dssp SSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHH
Confidence 3567788899988888876432221111 12356666666 22 123579999999999
Q ss_pred HhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHH
Q 017926 201 ASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKA 280 (363)
Q Consensus 201 ~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA 280 (363)
++...+. .++. ..+|.+.+++.+++..+|..|+++|++++.+.......+ -.+.++.|..+++++ +..+|..|
T Consensus 348 la~~~~~---~~~~-~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~-l~~~l~~l~~~l~d~--~~~Vr~~a 420 (852)
T 4fdd_A 348 LANVYRD---ELLP-HILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPY-LPELIPHLIQCLSDK--KALVRSIT 420 (852)
T ss_dssp HHHHHGG---GGHH-HHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGG-HHHHHHHHHHHTTCS--SHHHHHHH
T ss_pred HHHhccH---HHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHH-HHHHHHHHHHHcCCC--CHHHHHHH
Confidence 9986542 2222 467888888988888999999999999998866433222 235688999999876 67899999
Q ss_pred HHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 281 VSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 281 ~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
++++..++..... ...... -.++++.|+..|..+++.+++.++.+|.
T Consensus 421 ~~~l~~l~~~~~~---~~~~~~--~~~ll~~L~~~L~d~~~~vr~~a~~aL~ 467 (852)
T 4fdd_A 421 CWTLSRYAHWVVS---QPPDTY--LKPLMTELLKRILDSNKRVQEAACSAFA 467 (852)
T ss_dssp HHHHHHTHHHHHH---SCTTTT--HHHHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc---chHHHH--HHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 9999999864210 111111 2367888999998889999999999987
No 61
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=97.95 E-value=7.8e-05 Score=72.39 Aligned_cols=201 Identities=8% Similarity=0.062 Sum_probs=127.3
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCc--hhhHHhcCCHHHHHHhcCCC--CHHHHHHHHHHHHHHhccC
Q 017926 130 AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDN--ANDLSKLGGLSVLVGQLNHP--DTDIRKISAWILGKASQNN 205 (363)
Q Consensus 130 ~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDn--An~l~~lGgl~~Li~lL~s~--~~~Ir~~Aa~~Lgt~aqNN 205 (363)
.+++...+..+.+.+.+...+..++..|..+++.... -..+. -..++.++.+|+++ ++.||..|+++++++..--
T Consensus 127 ~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~ 205 (462)
T 1ibr_B 127 PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFT 205 (462)
T ss_dssp TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3566667777765422567888999999998876521 11111 13567788899887 7999999999999976421
Q ss_pred hHHH-HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHH
Q 017926 206 PLVQ-KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLV 284 (363)
Q Consensus 206 p~~Q-~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL 284 (363)
...- ......-.++.|.+++.+++..++..++.+|..++..++.....++..+-++.+...+++. +..+|..++.++
T Consensus 206 ~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~v~~~a~~~l 283 (462)
T 1ibr_B 206 KANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD--IDEVALQGIEFW 283 (462)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCS--SHHHHHHHHHHH
T ss_pred HHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--chHHHHHHHHHH
Confidence 1100 0001111467777788888889999999999999987765332222225567777778765 567899999999
Q ss_pred HHHhhhhhh----cCC---------CCcchhHH--hCCcHHHHHHhccCC-------ChhHHHHHHHHHHh
Q 017926 285 GDLAKCQLE----NMH---------KVEPPLFR--DRFFLKSVVDLTASA-------DLDLQEKVFLEHVF 333 (363)
Q Consensus 285 ~~L~~~~~~----~~~---------~~~~~~l~--~~g~v~~Lv~lL~~~-------d~~lqE~al~aL~~ 333 (363)
..++....+ ..+ ......+. -..+++.++..+... +..++..+..+|..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~ 354 (462)
T 1ibr_B 284 SNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLML 354 (462)
T ss_dssp HHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHH
Confidence 999864200 000 01111111 134566677777542 34678888888773
No 62
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=97.90 E-value=0.00018 Score=79.85 Aligned_cols=188 Identities=9% Similarity=0.061 Sum_probs=127.3
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCc-hhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHH
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDN-ANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQ 211 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDn-An~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~ 211 (363)
+.+.++.+.+ .+.+.|..|++.|...+...-. ...-..-..++.+++.|.++++.+|..|+.+|+.++...+.-
T Consensus 8 l~~lL~~l~s--~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~--- 82 (1230)
T 1u6g_C 8 ISNLLEKMTS--SDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEY--- 82 (1230)
T ss_dssp HHHHHHHTTC--SSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHH---
T ss_pred HHHHHHhcCC--CCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHH---
Confidence 3344444443 3567777777777765533110 000111134677889999999999999999999999865541
Q ss_pred HHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCccc-----HHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 017926 212 VLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAG-----QEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGD 286 (363)
Q Consensus 212 ~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a-----~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~ 286 (363)
.+ ...++.|+..+.+++..+|..|..+|+.++....+. .....-..-++.|...+.+. .+..+|..|+..+..
T Consensus 83 ~~-~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~-~~~~~~~~al~~l~~ 160 (1230)
T 1u6g_C 83 QV-ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQ-EDVSVQLEALDIMAD 160 (1230)
T ss_dssp HH-HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCC-SCHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCC-CchHHHHHHHHHHHH
Confidence 11 246788999888878888999999999998875542 11112234577888888742 256789999999999
Q ss_pred HhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 287 LAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 287 L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
++.. ..+...+.+ ..+++.+...|.+++..+|+.++.|+..
T Consensus 161 ~~~~----~~~~l~~~~--~~ll~~l~~~L~~~~~~vR~~a~~al~~ 201 (1230)
T 1u6g_C 161 MLSR----QGGLLVNFH--PSILTCLLPQLTSPRLAVRKRTIIALGH 201 (1230)
T ss_dssp HHHH----TCSSCTTTH--HHHHHHHGGGGGCSSHHHHHHHHHHHHH
T ss_pred HHHH----hHhHHHHHH--HHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 9853 222233322 4577888888888899999999999883
No 63
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=97.87 E-value=1.3e-05 Score=66.36 Aligned_cols=87 Identities=18% Similarity=0.223 Sum_probs=71.8
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHH
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFY 255 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~ 255 (363)
++.|+.+|+++++.+|..|+++||.+.. ..+++.|+++|++++..+|..|+++|+.+- .
T Consensus 44 ~~~L~~~L~d~~~~vR~~A~~aL~~~~~-----------~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~--~-------- 102 (131)
T 1te4_A 44 FEPLLESLSNEDWRIRGAAAWIIGNFQD-----------ERAVEPLIKLLEDDSGFVRSGAARSLEQIG--G-------- 102 (131)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHGGGCS-----------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC--S--------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCC-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC--c--------
Confidence 7899999999999999999999998763 135899999999888899999999999873 1
Q ss_pred hcCcHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 017926 256 VEAGDLMLQDILGNSSFEIRLHRKAVSLVGD 286 (363)
Q Consensus 256 ~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~ 286 (363)
...++.|..+++++ +..+|..|+..|..
T Consensus 103 -~~a~~~L~~~l~d~--~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 103 -ERVRAAMEKLAETG--TGFARKVAVNYLET 130 (131)
T ss_dssp -HHHHHHHHHHTTSC--CTHHHHHHHHHGGG
T ss_pred -HHHHHHHHHHHhCC--CHHHHHHHHHHHHh
Confidence 23578889999865 55688888877653
No 64
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=97.87 E-value=0.00076 Score=74.84 Aligned_cols=196 Identities=14% Similarity=0.093 Sum_probs=133.2
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHH-
Q 017926 130 AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLV- 208 (363)
Q Consensus 130 ~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~- 208 (363)
..++...++.+.+ .+.+.|..|+..|..+++.... ..+. ..++.|+..|.++++.+|..|+.+|+.++..-+.-
T Consensus 47 ~~il~~Ll~~L~d--~~~~vR~~A~~~L~~l~~~~~~-~~~~--~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~ 121 (1230)
T 1u6g_C 47 RKVVKMILKLLED--KNGEVQNLAVKCLGPLVSKVKE-YQVE--TIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPAS 121 (1230)
T ss_dssp HHHHHHHHHHTTC--SSHHHHHHHHHHHHHHHTTSCH-HHHH--HHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHhCCH-HHHH--HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcc
Confidence 3667778888864 4778899999999998876543 2222 24667778888889999999999999999754432
Q ss_pred -----HHHHHHcCcHHHHHHhhc-CCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHH
Q 017926 209 -----QKQVLELGALSKLMKMVK-SSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVS 282 (363)
Q Consensus 209 -----Q~~~le~G~lp~Ll~LL~-s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~ 282 (363)
+... -...+|.|++.+. +++..++..|+.+++.++..++.....+. ..-++.|...|.++ +..+|.+|+.
T Consensus 122 ~~~~~~~~~-~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~~~~-~~ll~~l~~~L~~~--~~~vR~~a~~ 197 (1230)
T 1u6g_C 122 SGSALAANV-CKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH-PSILTCLLPQLTSP--RLAVRKRTII 197 (1230)
T ss_dssp --CCTHHHH-HHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTH-HHHHHHHGGGGGCS--SHHHHHHHHH
T ss_pred cccchHHHH-HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHHHHH-HHHHHHHHHHHcCC--cHHHHHHHHH
Confidence 1222 2357999999998 47788899999999999975443222211 23456677777765 4678999998
Q ss_pred HHHHHhhhhh---------------h-cCCCCcch---------------hHH--hCCcHHHHHHhccCCChhHHHHHHH
Q 017926 283 LVGDLAKCQL---------------E-NMHKVEPP---------------LFR--DRFFLKSVVDLTASADLDLQEKVFL 329 (363)
Q Consensus 283 lL~~L~~~~~---------------~-~~~~~~~~---------------~l~--~~g~v~~Lv~lL~~~d~~lqE~al~ 329 (363)
++..++.... . ..+...+. .+. -..+++.+...+...++++++.++.
T Consensus 198 al~~l~~~~~~~~~~~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~ 277 (1230)
T 1u6g_C 198 ALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQ 277 (1230)
T ss_dssp HHHHHTTTC----CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 8888874310 0 00011110 010 1356778888888788999999998
Q ss_pred HHHhh
Q 017926 330 EHVFC 334 (363)
Q Consensus 330 aL~~~ 334 (363)
++..+
T Consensus 278 ~l~~l 282 (1230)
T 1u6g_C 278 AFESF 282 (1230)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88743
No 65
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=97.83 E-value=0.0003 Score=73.21 Aligned_cols=174 Identities=15% Similarity=0.118 Sum_probs=122.9
Q ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHH
Q 017926 132 LIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQ 211 (363)
Q Consensus 132 lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~ 211 (363)
...+.++.+.+ .+.+.|....-.+..+.+.- .++..+ .+..+.+-|+++++.+|..|+++||++. +++.-
T Consensus 71 ~~~~vik~~~s--~~~~~Krl~Yl~~~~~~~~~---~e~~~l-~in~l~kDL~~~n~~vr~lAL~~L~~i~--~~~~~-- 140 (618)
T 1w63_A 71 GQLECLKLIAS--QKFTDKRIGYLGAMLLLDER---QDVHLL-MTNCIKNDLNHSTQFVQGLALCTLGCMG--SSEMC-- 140 (618)
T ss_dssp GHHHHHHHHHS--SSHHHHHHHHHHHHHHCCCC---HHHHHH-HHHHHHHHHSCSSSHHHHHHHHHHHHHC--CHHHH--
T ss_pred hHHHHHHHHcC--CchHHHHHHHHHHHHHhCCC---cHHHHH-HHHHHHHhcCCCCHhHHHHHHHHHHhcC--CHHHH--
Confidence 33444454443 35566666555666666542 232221 4566777889999999999999999998 34332
Q ss_pred HHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhh
Q 017926 212 VLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQ 291 (363)
Q Consensus 212 ~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~ 291 (363)
...+|.+.++|.+.++.+|.+|+.|+..+.+.+|.... +-++.+..+|.++ +..++..|+.++..++..
T Consensus 141 ---~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v~-----~~~~~l~~lL~D~--d~~V~~~Al~~L~~i~~~- 209 (618)
T 1w63_A 141 ---RDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELME-----MFLPATKNLLNEK--NHGVLHTSVVLLTEMCER- 209 (618)
T ss_dssp ---HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGGG-----GGGGGTTTSTTCC--CHHHHHHHHHHHHHHCCS-
T ss_pred ---HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHHH-----HHHHHHHHHhCCC--CHhHHHHHHHHHHHHHHh-
Confidence 25689999999999999999999999999998886543 4456777788775 677999999999999842
Q ss_pred hhcCCCCcchhHHhCCcHHHHHHhccC---------------CChhHHHHHHHHHH
Q 017926 292 LENMHKVEPPLFRDRFFLKSVVDLTAS---------------ADLDLQEKVFLEHV 332 (363)
Q Consensus 292 ~~~~~~~~~~~l~~~g~v~~Lv~lL~~---------------~d~~lqE~al~aL~ 332 (363)
+++....+. .+++.++.+|.. .++-.|-.++++|.
T Consensus 210 ----~~~~~~~~~--~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~ 259 (618)
T 1w63_A 210 ----SPDMLAHFR--KLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLR 259 (618)
T ss_dssp ----HHHHHHHHH--TTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHHHHHH
T ss_pred ----ChHHHHHHH--HHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHHHHHHH
Confidence 222222332 567777777652 47888888888877
No 66
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=97.82 E-value=4.5e-05 Score=74.09 Aligned_cols=194 Identities=9% Similarity=-0.022 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhh------HHh------cCCHHHHHHhcCCCCHHHHHHHHH
Q 017926 129 DAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNAND------LSK------LGGLSVLVGQLNHPDTDIRKISAW 196 (363)
Q Consensus 129 d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~------l~~------lGgl~~Li~lL~s~~~~Ir~~Aa~ 196 (363)
..+.+...+.++.+.+.+.+.|..|...|..++.......+ ... ...-..|+..|.++++.+ ..++.
T Consensus 33 ~~~~~~~L~~il~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~~~~l~~~~~~~ik~~ll~~l~~~~~~v-~~~~~ 111 (462)
T 1ibr_B 33 LPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQ 111 (462)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCCSSS-CSHHH
T ss_pred hHHHHHHHHHHHHcCCCChHHHHHHHHHHHHhccccchHHHHHHHhhhhcCCHHHHHHHHHHHHHHhCCCCchh-hHHHH
Confidence 35566677788887666788899999888888765431111 111 112234677888888888 99999
Q ss_pred HHHHHhccC-hHHHHHHHHcCcHHHHHHhhcCC--CHHHHHHHHHHHHHHhcCC-cccHHHHHhcCcHHHHHHhhcCCCc
Q 017926 197 ILGKASQNN-PLVQKQVLELGALSKLMKMVKSS--FVEEAVKALYTVSSLIRNN-LAGQEMFYVEAGDLMLQDILGNSSF 272 (363)
Q Consensus 197 ~Lgt~aqNN-p~~Q~~~le~G~lp~Ll~LL~s~--~~~v~~kAL~ALSsLiR~~-~~a~~~f~~~gG~~~L~~lL~s~~~ 272 (363)
+|+.++... |. .. -.+.+|.|++.+.++ +..++..++.+|+.+++.. +.....+. ...++.+..+++++..
T Consensus 112 ~i~~ia~~~~~~-~~---w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~ 186 (462)
T 1ibr_B 112 CVAGIACAEIPV-NQ---WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEP 186 (462)
T ss_dssp HHHHHHHHHGGG-TC---CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHhccc-cc---cHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCC
Confidence 999998642 21 00 137899999999988 7888999999999999865 32211121 1356788888887633
Q ss_pred cHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 273 EIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 273 ~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
+..+|..|+..+.+++....+.... .....-+++.+...+..++.+++..++.++.
T Consensus 187 ~~~vr~~a~~~l~~~~~~~~~~~~~----~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~ 242 (462)
T 1ibr_B 187 SNNVKLAATNALLNSLEFTKANFDK----ESERHFIMQVVCEATQCPDTRVRVAALQNLV 242 (462)
T ss_dssp CHHHHHHHHHHHHHHTTTTHHHHTS----HHHHHHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 5679999999999876321000000 0011124667777777889999999999987
No 67
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=97.74 E-value=0.00025 Score=74.76 Aligned_cols=176 Identities=15% Similarity=0.179 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccCh-HHHHHHHHcCcHHHHHHhhc
Q 017926 148 EDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNP-LVQKQVLELGALSKLMKMVK 226 (363)
Q Consensus 148 e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp-~~Q~~~le~G~lp~Ll~LL~ 226 (363)
..|..|...|..+++... ..+.. ..++.+...|++++..+|..|++++|.++...+ +.-...+ ...+|.|+..++
T Consensus 343 ~~r~~a~~~l~~l~~~~~--~~~~~-~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~~l~~~l~ 418 (876)
T 1qgr_A 343 NPCKAAGVCLMLLATCCE--DDIVP-HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMK 418 (876)
T ss_dssp CHHHHHHHHHHHHHHHHG--GGGHH-HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCc--HhhHH-HHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHhC
Confidence 345566666666554332 11211 245555677888999999999999999998654 3222222 358999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCcccH--HHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhc----------
Q 017926 227 SSFVEEAVKALYTVSSLIRNNLAGQ--EMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLEN---------- 294 (363)
Q Consensus 227 s~~~~v~~kAL~ALSsLiR~~~~a~--~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~---------- 294 (363)
+++..+|..|+++|+.++...++.. ..+. ...++.|...+.++ .++|..+++++.+++....+.
T Consensus 419 d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l-~~~l~~l~~~l~~~---~~v~~~a~~al~~l~~~~~~~~~~~~~~~~~ 494 (876)
T 1qgr_A 419 DPSVVVRDTAAWTVGRICELLPEAAINDVYL-APLLQCLIEGLSAE---PRVASNVCWAFSSLAEAAYEAADVADDQEEP 494 (876)
T ss_dssp CSSHHHHHHHHHHHHHHHHHCGGGTSSTTTH-HHHHHHHHHHTTSC---HHHHHHHHHHHHHHHHHHHHTTSCTTSCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHhCchhcccHHHH-HHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHhhhccccccccccc
Confidence 9888999999999999998765421 1111 24466777777663 678999999999998642100
Q ss_pred CCCCcchhHHhCCcHHHHHHhccCC---ChhHHHHHHHHHHh
Q 017926 295 MHKVEPPLFRDRFFLKSVVDLTASA---DLDLQEKVFLEHVF 333 (363)
Q Consensus 295 ~~~~~~~~l~~~g~v~~Lv~lL~~~---d~~lqE~al~aL~~ 333 (363)
......+.+ ..+++.|..++... +..++..++.++..
T Consensus 495 ~~~~l~~~~--~~il~~L~~~l~~~~~~~~~~r~~~~~~l~~ 534 (876)
T 1qgr_A 495 ATYCLSSSF--ELIVQKLLETTDRPDGHQNNLRSSAYESLME 534 (876)
T ss_dssp CCCSSTTTH--HHHHHHHHHHTTSCSSCSTTHHHHHHHHHHH
T ss_pred cchhhhHhH--HHHHHHHHHHHhCcCcchhhHHHHHHHHHHH
Confidence 001123333 35778888888764 35777778777763
No 68
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=97.74 E-value=0.00044 Score=62.58 Aligned_cols=146 Identities=8% Similarity=0.089 Sum_probs=110.1
Q ss_pred HHHHHHHHHhh-cCCCCHHHHHHHHHHHHHcccCCCchhhHHh--cCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChH
Q 017926 131 QLIQIAIDDLN-NSTLSLEDSQRALQELLILVEPIDNANDLSK--LGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPL 207 (363)
Q Consensus 131 ~lmk~al~~L~-~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~--lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~ 207 (363)
+++......+. + .+...+..|+..+..++.... ..|.. -.-+++|+..+.+.++.+|..|+.+|.+++.+.+
T Consensus 56 ~i~~~L~~~l~kd--~~~~V~~~a~~~l~~la~~l~--~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~- 130 (242)
T 2qk2_A 56 ALVSALKKVITKD--SNVVLVAMAGKCLALLAKGLA--KRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTS- 130 (242)
T ss_dssp HHHHHHHHHHHHC--SCHHHHHHHHHHHHHHHHHHG--GGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC-
T ss_pred HHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC-
Confidence 55555555563 4 366788899999999886542 23332 2368888999999999999999999999998654
Q ss_pred HHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCccc--HHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHH
Q 017926 208 VQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAG--QEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVG 285 (363)
Q Consensus 208 ~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a--~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~ 285 (363)
.. ..+|.|+..+++.+..+|..++..|+.++..+.+. ....+ ..-++.|..+|.+. +..+|..|..++.
T Consensus 131 ~~------~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l-~~l~p~l~~~l~D~--~~~VR~~A~~~l~ 201 (242)
T 2qk2_A 131 LE------AQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLL-KLLTTSLVKTLNEP--DPTVRDSSAEALG 201 (242)
T ss_dssp HH------HHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHH-HHHHHHHHHHHTSS--CHHHHHHHHHHHH
T ss_pred HH------HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHH-HHHHHHHHHHhcCC--ChHHHHHHHHHHH
Confidence 11 36888999999988999999999999987765332 12222 25678899999876 5679999999999
Q ss_pred HHhhh
Q 017926 286 DLAKC 290 (363)
Q Consensus 286 ~L~~~ 290 (363)
.++..
T Consensus 202 ~l~~~ 206 (242)
T 2qk2_A 202 TLIKL 206 (242)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 69
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=97.63 E-value=0.00015 Score=76.24 Aligned_cols=191 Identities=13% Similarity=0.131 Sum_probs=126.3
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchh-hHHhcCCHHHHHHhcCC---------------CCHHHHHHH
Q 017926 131 QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNAN-DLSKLGGLSVLVGQLNH---------------PDTDIRKIS 194 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn-~l~~lGgl~~Li~lL~s---------------~~~~Ir~~A 194 (363)
.+|...+..+.+.+.+...|..+++.+..++....... .+. -..+++++..|.. ....+|..+
T Consensus 498 ~il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~ 576 (861)
T 2bpt_A 498 ALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETS-ASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNI 576 (861)
T ss_dssp HHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCCGGGHHHH-HHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcchHHHHHHHHHHHHHHHHcchhhHHHH-HHHHHHHHHHHHHHHhhhcccCChhhHHHHHHHHHHH
Confidence 45666666666544445667778888888877654321 111 1345666666542 246789999
Q ss_pred HHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCH-HHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCcc
Q 017926 195 AWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFV-EEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFE 273 (363)
Q Consensus 195 a~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~-~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~ 273 (363)
+.+|+++++.-+..-..++ ...++.++.++++.+. .++..++.++++++.........++. .-++.|...+.++ +
T Consensus 577 ~~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l~-~i~~~l~~~l~~~--~ 652 (861)
T 2bpt_A 577 LTVLAAVIRKSPSSVEPVA-DMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLE-TFSPYLLKALNQV--D 652 (861)
T ss_dssp HHHHHHHHHHCGGGTGGGH-HHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHH-HHHHHHHHHHHCT--T
T ss_pred HHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHhccc--c
Confidence 9999999986553100111 2568888888988766 78889999999998765443333332 3567888888665 4
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCC--ChhHHHHHHHHHH
Q 017926 274 IRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASA--DLDLQEKVFLEHV 332 (363)
Q Consensus 274 ~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~--d~~lqE~al~aL~ 332 (363)
..+|..++.++..++.. .++...+.+ ..+++.+...+..+ +.++++.++.++.
T Consensus 653 ~~vr~~a~~~l~~l~~~----~~~~~~~~~--~~l~~~l~~~l~~~~~~~~vr~~~~~~l~ 707 (861)
T 2bpt_A 653 SPVSITAVGFIADISNS----LEEDFRRYS--DAMMNVLAQMISNPNARRELKPAVLSVFG 707 (861)
T ss_dssp SHHHHHHHHHHHHHHHH----TGGGGHHHH--HHHHHHHHHHHHCTTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----hchhccchH--HHHHHHHHHHhCCccccHhhhHHHHHHHH
Confidence 45899999999999863 222222222 35677788888765 4889999999987
No 70
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=97.62 E-value=0.0002 Score=74.49 Aligned_cols=174 Identities=12% Similarity=0.039 Sum_probs=116.7
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
++-.+..|+..|..+... ++.. ..++++..+|+++++.||..|+.+++.+...+|+.-+ +.++.|.++|
T Consensus 120 n~~vr~lAL~~L~~i~~~-----~~~~-~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v~-----~~~~~l~~lL 188 (618)
T 1w63_A 120 TQFVQGLALCTLGCMGSS-----EMCR-DLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELME-----MFLPATKNLL 188 (618)
T ss_dssp SSHHHHHHHHHHHHHCCH-----HHHH-HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGGG-----GGGGGTTTST
T ss_pred CHhHHHHHHHHHHhcCCH-----HHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHHH-----HHHHHHHHHh
Confidence 556788888888876521 2221 3467888999999999999999999999998886432 6889999999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcC-------------CCccHHHHHHHHHHHHHHhhhhh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGN-------------SSFEIRLHRKAVSLVGDLAKCQL 292 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s-------------~~~~~klr~kA~~lL~~L~~~~~ 292 (363)
.+.++.++..|+.+|+.++.+++.....|. .-++.+..+|.+ ...++-+|.+++.++..++....
T Consensus 189 ~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~--~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~~l~~~~~ 266 (618)
T 1w63_A 189 NEKNHGVLHTSVVLLTEMCERSPDMLAHFR--KLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDD 266 (618)
T ss_dssp TCCCHHHHHHHHHHHHHHCCSHHHHHHHHH--TTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHHHHHHHHTTTCH
T ss_pred CCCCHhHHHHHHHHHHHHHHhChHHHHHHH--HHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHHHHHHHHhCCCCH
Confidence 998899999999999999887654333333 234444444432 01245667777777776664200
Q ss_pred h--------------cCCC---Cc----------------chhHHhCCcHHHHHHhccCCChhHHHHHHHHHHh
Q 017926 293 E--------------NMHK---VE----------------PPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVF 333 (363)
Q Consensus 293 ~--------------~~~~---~~----------------~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~ 333 (363)
+ ..+. .. .+.+. ...+..|..+|.+.|+++|..++.+|..
T Consensus 267 ~~~~~~~~~L~~l~~~~~~~~~~~~aV~~ea~~~i~~l~~~~~l~-~~a~~~L~~~L~~~d~~vr~~aL~~L~~ 339 (618)
T 1w63_A 267 DSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLR-VLAINILGRFLLNNDKNIRYVALTSLLK 339 (618)
T ss_dssp HHHHTTHHHHHHHHHTSCCSSTHHHHHHHHHHHHHHHSCCCHHHH-HHHHHHHHHHHTCSSTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 0 0000 00 00111 1356677788888888999988888873
No 71
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=97.59 E-value=0.0019 Score=67.98 Aligned_cols=194 Identities=13% Similarity=0.075 Sum_probs=130.4
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCch--hhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChH
Q 017926 130 AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNA--NDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPL 207 (363)
Q Consensus 130 ~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnA--n~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~ 207 (363)
..++...+..+.+++.+.+.|..|+..|..+++.+... ........++.+..++++++.++|..|+.+++.++...++
T Consensus 171 ~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~ 250 (876)
T 1qgr_A 171 NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQ 250 (876)
T ss_dssp HHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHH
Confidence 34555566666665446788999999998877643210 1111111366667778888999999999999999998776
Q ss_pred HHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCccc-----------------HHHHHh---cCcHHHHHHhh
Q 017926 208 VQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAG-----------------QEMFYV---EAGDLMLQDIL 267 (363)
Q Consensus 208 ~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a-----------------~~~f~~---~gG~~~L~~lL 267 (363)
.-...+....++.++..+.+.++.++..|+..++.+++..... ...+.. ..-++.+...+
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l 330 (876)
T 1qgr_A 251 YMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTL 330 (876)
T ss_dssp GCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHh
Confidence 5344444578999999888888899999999999988642100 000111 12245566666
Q ss_pred cCC-----CccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 268 GNS-----SFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 268 ~s~-----~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
... ..+.++|..|..++..|+... .+ .+. ..+++.+...+.+.+..+|+.++.++.
T Consensus 331 ~~~~~d~~~~~~~~r~~a~~~l~~l~~~~----~~----~~~-~~~l~~l~~~l~~~~~~~r~~a~~~l~ 391 (876)
T 1qgr_A 331 TKQDENDDDDDWNPCKAAGVCLMLLATCC----ED----DIV-PHVLPFIKEHIKNPDWRYRDAAVMAFG 391 (876)
T ss_dssp TCCCSSCCTTCCCHHHHHHHHHHHHHHHH----GG----GGH-HHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred hcccccccccccHHHHHHHHHHHHHHHHC----cH----hhH-HHHHHHHHHHccCCChHHHHHHHHHHH
Confidence 421 123457888999999998632 11 122 256777888888889999999999988
No 72
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=97.53 E-value=0.0025 Score=67.02 Aligned_cols=199 Identities=12% Similarity=-0.010 Sum_probs=131.4
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCch--hhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHH
Q 017926 131 QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNA--NDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLV 208 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnA--n~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~ 208 (363)
.++...+..+.+++.+.+.|..|+..+..+++.++.. ........++.|..+++++++.+|..|+.+++.++...|..
T Consensus 179 ~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~ 258 (861)
T 2bpt_A 179 NILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTF 258 (861)
T ss_dssp HHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455566666557888999999998876544311 00011113555667778899999999999999999877653
Q ss_pred HHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcc-----------------cHHHHHhcCcHHHHHHhhcCCC
Q 017926 209 QKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLA-----------------GQEMFYVEAGDLMLQDILGNSS 271 (363)
Q Consensus 209 Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~-----------------a~~~f~~~gG~~~L~~lL~s~~ 271 (363)
-...+....++.++..+.+.+..++..|+..++.+++.... ....++ ...++.++..|....
T Consensus 259 ~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~ll~~l~~~~ 337 (861)
T 2bpt_A 259 MKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSI-KDVVPNLLNLLTRQN 337 (861)
T ss_dssp CHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHH-HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhHHHHHHHH-HHHHHHHHHHHHhcc
Confidence 22223336778888888888889999999999998875211 011111 234667777776421
Q ss_pred -----ccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcccccCch
Q 017926 272 -----FEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGLVFCTCP 342 (363)
Q Consensus 272 -----~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~~~~~~~ 342 (363)
.+..+|..+..++..++... .+. +. ..+++.+.+.+.+.+...++.++.++. .+...|.
T Consensus 338 ~d~~d~~~~~r~~a~~~L~~l~~~~----~~~----~~-~~l~~~l~~~l~~~~~~~r~~a~~~l~---~i~~~~~ 401 (861)
T 2bpt_A 338 EDPEDDDWNVSMSAGACLQLFAQNC----GNH----IL-EPVLEFVEQNITADNWRNREAAVMAFG---SIMDGPD 401 (861)
T ss_dssp CC-CCCCCHHHHHHHHHHHHHHHHH----GGG----GH-HHHHHHHHHHTTCSSHHHHHHHHHHHH---HTSSSSC
T ss_pred cccccccCcHHHHHHHHHHHHHHHc----cHh----HH-HHHHHHHHHHcCCCChhHHHHHHHHHH---HHHcCCC
Confidence 12368888999999998632 111 11 246677788888889999999999988 4444443
No 73
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=97.44 E-value=0.0034 Score=65.42 Aligned_cols=163 Identities=14% Similarity=0.019 Sum_probs=122.1
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHH
Q 017926 143 STLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLM 222 (363)
Q Consensus 143 ~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll 222 (363)
+..+...|..++..+.++.-.-. +. ..|+..+++++.+++..+|..+--.+...+..+|+.-.. ++..+.
T Consensus 48 ~~~~~~~k~~~l~Kli~l~~~G~---d~--s~~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~~~e~~~L-----~iN~l~ 117 (621)
T 2vgl_A 48 KALDGYSKKKYVCKLLFIFLLGH---DI--DFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRL-----INNAIK 117 (621)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHSC---CC--CSCHHHHHHGGGCSCHHHHHHHHHHHHHSCCCCHHHHHH-----HHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCC---CC--chhHHHHHHHhcCCCHHHHHHHHHHHHHHccCCcHHHHH-----HHHHHH
Confidence 34567778777777776533211 11 247899999999999999999999999999988754322 356777
Q ss_pred HhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhh--cCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcc
Q 017926 223 KMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDIL--GNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEP 300 (363)
Q Consensus 223 ~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL--~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~ 300 (363)
+=+.++++-++.-|+.+||++. .+. +.+ .-.+.+..++ .+. +..+|++|+..+..+... +++..
T Consensus 118 kDl~~~n~~ir~lALr~L~~i~--~~e----~~~-~l~~~v~~~l~~~d~--~~~VRK~A~~al~kl~~~-----~p~~~ 183 (621)
T 2vgl_A 118 NDLASRNPTFMGLALHCIANVG--SRE----MAE-AFAGEIPKILVAGDT--MDSVKQSAALCLLRLYRT-----SPDLV 183 (621)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHC--CHH----HHH-HHTTHHHHHHHCSSS--CHHHHHHHHHHHHHHHHH-----CGGGC
T ss_pred HhcCCCCHHHHHHHHHHhhccC--CHH----HHH-HHHHHHHHHHhCCCC--CHHHHHHHHHHHHHHHHh-----Chhhc
Confidence 7778888889999999999993 232 222 3446777888 444 678999999999999862 33322
Q ss_pred hhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 301 PLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 301 ~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
+ ..++++.+.++|...|+.++..|+.++.
T Consensus 184 ~---~~~~~~~l~~lL~d~d~~V~~~a~~~l~ 212 (621)
T 2vgl_A 184 P---MGDWTSRVVHLLNDQHLGVVTAATSLIT 212 (621)
T ss_dssp C---CCSCHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred C---chhHHHHHHHHhCCCCccHHHHHHHHHH
Confidence 2 2589999999998889999999988876
No 74
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=97.37 E-value=0.0036 Score=58.06 Aligned_cols=145 Identities=14% Similarity=0.163 Sum_probs=114.1
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHH
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFY 255 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~ 255 (363)
+..|+.+|...|+.++.+|..+|..+...-|..-....=...+|.++.++++.+..+..+|+.+|..++.+.|..-+.|.
T Consensus 35 l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y~ 114 (265)
T 3b2a_A 35 LFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTFL 114 (265)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHHH
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 45566788888999999999999999987655555544457899999999999999999999999999999998888887
Q ss_pred hcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhc
Q 017926 256 VEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCG 335 (363)
Q Consensus 256 ~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~ 335 (363)
.. ...|..++.++ +.-++.-|+-.+..|-- .. . ..+++..+..++.+.|..++..++.++..-+
T Consensus 115 Kl--~~aL~dlik~~--~~il~~eaae~Lgklkv-----~~--~-----~~~V~~~l~sLl~Skd~~vK~agl~~L~eia 178 (265)
T 3b2a_A 115 KA--AKTLVSLLESP--DDMMRIETIDVLSKLQP-----LE--D-----SKLVRTYINELVVSPDLYTKVAGFCLFLNML 178 (265)
T ss_dssp HH--HHHHHHHTTSC--CHHHHHHHHHHHHHCCB-----SC--C-----CHHHHHHHHHHHTCSSHHHHHHHHHHHHHHG
T ss_pred HH--HHHHHHHhcCC--CchHHHHHHHHhCcCCc-----cc--c-----hHHHHHHHHHHHhCCChhHHHHHHHHHHHhh
Confidence 64 45777888866 45577888887777721 11 1 2456778888888889999999999988433
Q ss_pred c
Q 017926 336 L 336 (363)
Q Consensus 336 ~ 336 (363)
.
T Consensus 179 ~ 179 (265)
T 3b2a_A 179 N 179 (265)
T ss_dssp G
T ss_pred c
Confidence 3
No 75
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=97.29 E-value=0.013 Score=57.38 Aligned_cols=180 Identities=10% Similarity=0.045 Sum_probs=105.9
Q ss_pred CCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccCh
Q 017926 127 PSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNP 206 (363)
Q Consensus 127 ~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp 206 (363)
++....++|+ ..++++..++..+..++..+.++.-.-+.=....-...+..+++++.+++..+|...--.+-.++..++
T Consensus 22 ~~k~~v~qe~-r~fn~~~~~~~kc~~~l~kll~l~~~G~~f~~~e~t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~~~ 100 (355)
T 3tjz_B 22 LEKSAVLQEA-RVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAE 100 (355)
T ss_dssp CCHHHHHHHG-GGTTSSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHGGGGCCCHHHHHHHHHHHHHHTTTSS
T ss_pred chHHHHHHHH-HHhcCCCCcHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCHH
Confidence 3445555563 566665555555455666666554433221111112345566777777787887777777777665432
Q ss_pred HHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 017926 207 LVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGD 286 (363)
Q Consensus 207 ~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~ 286 (363)
+ .+ =+...|.+=++++++-+|..|+.++|+|.- +.-.+. -...+..+|.+. ++.+|++|+.....
T Consensus 101 e---~i---Lv~Nsl~kDl~~~N~~iR~lALRtL~~I~~--~~m~~~-----l~~~lk~~L~d~--~pyVRk~A~l~~~k 165 (355)
T 3tjz_B 101 D---VI---IVTSSLTKDMTGKEDSYRGPAVRALCQITD--STMLQA-----IERYMKQAIVDK--VPSVSSSALVSSLH 165 (355)
T ss_dssp C---GG---GGHHHHHHHHHSSCHHHHHHHHHHHHHHCC--TTTHHH-----HHHHHHHHHTCS--SHHHHHHHHHHHHH
T ss_pred H---HH---HHHHHHHhhcCCCcHhHHHHHHHHHhcCCC--HHHHHH-----HHHHHHHHcCCC--CHHHHHHHHHHHHH
Confidence 2 12 245666666667777777777888877742 222222 234567777766 55677777777777
Q ss_pred HhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 287 LAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 287 L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
|.. .. . .+++ +|+..+-+++...++-++-+|+.+|.
T Consensus 166 L~~-----~~---p-e~v~-~~~~~l~~ll~d~n~~V~~~Al~lL~ 201 (355)
T 3tjz_B 166 LLK-----CS---F-DVVK-RWVNEAQEAASSDNIMVQYHALGLLY 201 (355)
T ss_dssp HTT-----TC---H-HHHH-TTHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred Hhc-----cC---H-HHHH-HHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 763 12 2 2232 57777777777777777766666655
No 76
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.0082 Score=55.30 Aligned_cols=175 Identities=9% Similarity=0.097 Sum_probs=120.3
Q ss_pred HhHHHHHHHHH-HcCC-------CCH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCC--chh-hHHhcCCHHHH
Q 017926 112 KRQMEIKELME-KLKT-------PSD-AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPID--NAN-DLSKLGGLSVL 179 (363)
Q Consensus 112 ~r~~~Lkeal~-~l~~-------~~d-~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iD--nAn-~l~~lGgl~~L 179 (363)
+|++-+.++.. .+.+ ..+ .+++....+.+.+ +.+...+..|+..+..+++... .-. .+.. -.+|++
T Consensus 32 eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~-D~n~~v~~~A~~al~~la~~l~~~~f~~~y~~-~llp~l 109 (249)
T 2qk1_A 32 DRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQK-DANIQAVALAAQSVELICDKLKTPGFSKDYVS-LVFTPL 109 (249)
T ss_dssp HHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHHCTTTSCHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHhcccccccHHHHH-HHHHHH
Confidence 46666666666 4421 123 4566666666632 3356678888999998886442 111 2222 258899
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHh---
Q 017926 180 VGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYV--- 256 (363)
Q Consensus 180 i~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~--- 256 (363)
+..+.+..+.||..+..++-+++.+-+.....-.=...++.|+..|++.+..+|..++..|+.++...+..-..|..
T Consensus 110 l~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~ 189 (249)
T 2qk1_A 110 LDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLK 189 (249)
T ss_dssp HHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHH
Confidence 99999989999999999999888754211100000136788999999988899999999999999876643233332
Q ss_pred cCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 257 EAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 257 ~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
-.-++.|..++.+. +..+|..|..++..++..
T Consensus 190 ~~iip~l~~~l~D~--~~~VR~aA~~~l~~i~~~ 221 (249)
T 2qk1_A 190 DEVVPIVIQIVNDT--QPAIRTIGFESFAILIKI 221 (249)
T ss_dssp TTHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHH
Confidence 35678999999876 667999999999999864
No 77
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.016 Score=53.62 Aligned_cols=177 Identities=12% Similarity=-0.011 Sum_probs=115.9
Q ss_pred CCHHHHHHHHHHHHHcccCCCc----hhhHHhcCCHHHH-HHhcCCCCHHHHHHHHHHHHHHhccChH-----HHHHHHH
Q 017926 145 LSLEDSQRALQELLILVEPIDN----ANDLSKLGGLSVL-VGQLNHPDTDIRKISAWILGKASQNNPL-----VQKQVLE 214 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~iDn----An~l~~lGgl~~L-i~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~-----~Q~~~le 214 (363)
..=..|..|++.|..++..... ...+...+.+..+ -..+...|..+...++.+|..++..-.. ......-
T Consensus 21 k~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~ 100 (278)
T 4ffb_C 21 KLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLI 100 (278)
T ss_dssp SSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHH
Confidence 3557889999999888765321 1122234444444 4678899999999999999998864221 1111222
Q ss_pred cCcHHHHHH-hhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhh
Q 017926 215 LGALSKLMK-MVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLE 293 (363)
Q Consensus 215 ~G~lp~Ll~-LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~ 293 (363)
...+|.|+. .+.+....++.+|+.++..++....+... + ++.+...+++. +++++..++..|..+....
T Consensus 101 ~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~-~-----~e~l~~~l~~K--npkv~~~~l~~l~~~l~~f-- 170 (278)
T 4ffb_C 101 STWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQ-S-----VELVIPFFEKK--LPKLIAAAANCVYELMAAF-- 170 (278)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHH-H-----HHHHGGGGGCS--CHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHH-H-----HHHHHHHHhcc--CHHHHHHHHHHHHHHHHHh--
Confidence 356888885 57888888898999988888754332221 1 35566667776 6789999999998887642
Q ss_pred cCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 294 NMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 294 ~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
+.........-..+++.+..+|.+.|.++|+.|..++.
T Consensus 171 -g~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~ 208 (278)
T 4ffb_C 171 -GLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIV 208 (278)
T ss_dssp -TTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHH
T ss_pred -CCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 11111111111246677888899999999999999876
No 78
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=97.00 E-value=0.017 Score=60.17 Aligned_cols=129 Identities=12% Similarity=0.124 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHh
Q 017926 145 LSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKM 224 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~L 224 (363)
.+.+.|..+.-.+..+.+.- .++.-+ .+..+.+-|+++++-+|..|..+||++. +|+.-+ ..+|.+.++
T Consensus 86 ~~~~~Krl~YL~l~~~~~~~---~e~~~L-~iN~l~kDl~~~n~~ir~lALr~L~~i~--~~e~~~-----~l~~~v~~~ 154 (621)
T 2vgl_A 86 NRYTEKQIGYLFISVLVNSN---SELIRL-INNAIKNDLASRNPTFMGLALHCIANVG--SREMAE-----AFAGEIPKI 154 (621)
T ss_dssp SCHHHHHHHHHHHHHSCCCC---HHHHHH-HHHHHHHHHHSCCHHHHHHHHHHHHHHC--CHHHHH-----HHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHccCC---cHHHHH-HHHHHHHhcCCCCHHHHHHHHHHhhccC--CHHHHH-----HHHHHHHHH
Confidence 35677877777777776542 222211 2445566778999999999999999996 455333 457889999
Q ss_pred h--cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 225 V--KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 225 L--~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
+ .+.++-||.+|+.|+..+.+.+|.... ..+-++.|..+|.++ +..++..|+.++..++.
T Consensus 155 l~~~d~~~~VRK~A~~al~kl~~~~p~~~~---~~~~~~~l~~lL~d~--d~~V~~~a~~~l~~i~~ 216 (621)
T 2vgl_A 155 LVAGDTMDSVKQSAALCLLRLYRTSPDLVP---MGDWTSRVVHLLNDQ--HLGVVTAATSLITTLAQ 216 (621)
T ss_dssp HHCSSSCHHHHHHHHHHHHHHHHHCGGGCC---CCSCHHHHHHHTTCS--CHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHhChhhcC---chhHHHHHHHHhCCC--CccHHHHHHHHHHHHHH
Confidence 9 778889999999999999998775442 136689999999765 66799999999999986
No 79
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=96.90 E-value=0.017 Score=55.94 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=113.2
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhc-
Q 017926 179 LVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVE- 257 (363)
Q Consensus 179 Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~- 257 (363)
+++-|.+.+..-+..+..-|..+.|..+..-..|++.+|+..|+++..+.+...+.-+|.|+..+.- |..+.+-++..
T Consensus 123 iiekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~-~v~Gm~gvvs~~ 201 (339)
T 3dad_A 123 ILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLML-FVDGMLGVVAHS 201 (339)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTT-SHHHHHHHHHCH
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHh-ccccccchhCCH
Confidence 4455556677778899999999777767777789999999999999999888899999999999985 67788777764
Q ss_pred CcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh--------C--CcHHHHHHhcc---CCChhHH
Q 017926 258 AGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD--------R--FFLKSVVDLTA---SADLDLQ 324 (363)
Q Consensus 258 gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~--------~--g~v~~Lv~lL~---~~d~~lq 324 (363)
..+..|..++.+. +..+.+.|+.+|..++.. .+.....+.+ . .-...|+.+|+ +.|.+++
T Consensus 202 ~fI~~lyslv~s~--~~~V~k~AL~LL~v~V~~-----se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq 274 (339)
T 3dad_A 202 DTIQWLYTLCASL--SRLVVKTALKLLLVFVEY-----SENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELL 274 (339)
T ss_dssp HHHHHHHHGGGCS--CHHHHHHHHHHHHHHHHH-----CGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHH
T ss_pred HHHHHHHHHHcCc--cHHHHHHHHHHHHHHHcc-----CcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHH
Confidence 5788889888864 677888899999999863 2222222221 1 23679999997 6799999
Q ss_pred HHHHHHHH
Q 017926 325 EKVFLEHV 332 (363)
Q Consensus 325 E~al~aL~ 332 (363)
..++.-+.
T Consensus 275 ~~amtLIN 282 (339)
T 3dad_A 275 VYTVTLIN 282 (339)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877655
No 80
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=96.67 E-value=0.12 Score=50.69 Aligned_cols=167 Identities=16% Similarity=0.110 Sum_probs=114.7
Q ss_pred HHHHHHHHHccc--CCCchhhHHhcCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHhccChHHHHHHHHc-C
Q 017926 151 QRALQELLILVE--PIDNANDLSKLGGLSVLVGQLN-----------HPDTDIRKISAWILGKASQNNPLVQKQVLEL-G 216 (363)
Q Consensus 151 ~~AL~~L~~Lve--~iDnAn~l~~lGgl~~Li~lL~-----------s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~-G 216 (363)
...|..|.-.+. +++.-..|. .+|+..|+..|. ..+..++..+..||..+. ||...-+.++++ .
T Consensus 85 ~~~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalm-N~~~G~~~vl~~~~ 162 (383)
T 3eg5_B 85 LSCLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM-NNKFGIKTMLETEE 162 (383)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHT-SSHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHh-cchhhHHHHHcChH
Confidence 345666665444 457788997 899999998874 124578888999999887 666666777766 7
Q ss_pred cHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCc-cc-HHHHHh----------cCcHHHHHHhhcCCCccHHHHHHHHHHH
Q 017926 217 ALSKLMKMVKSSFVEEAVKALYTVSSLIRNNL-AG-QEMFYV----------EAGDLMLQDILGNSSFEIRLHRKAVSLV 284 (363)
Q Consensus 217 ~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~-~a-~~~f~~----------~gG~~~L~~lL~s~~~~~klr~kA~~lL 284 (363)
.+..|...|.+....++.-++--|+.+|--.. .+ ...+++ ..-+..++..|.+. .+..++..+..+|
T Consensus 163 ~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~-~~~e~~~~~m~lI 241 (383)
T 3eg5_B 163 GILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSG-TSIALKVGCLQLI 241 (383)
T ss_dssp HHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTT-SCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHHcc-CcHHHHHHHHHHH
Confidence 89999999999888888878888877765432 22 333322 23478889999875 3677889999999
Q ss_pred HHHhhhhhhcCCC----CcchhHHhCCcHHHHHHhccC-CChhHH
Q 017926 285 GDLAKCQLENMHK----VEPPLFRDRFFLKSVVDLTAS-ADLDLQ 324 (363)
Q Consensus 285 ~~L~~~~~~~~~~----~~~~~l~~~g~v~~Lv~lL~~-~d~~lq 324 (363)
..++... .+- ..+..|...|+.+.+-. |+. +++++.
T Consensus 242 N~li~~~---~dl~~R~~lR~ef~~~Gl~~il~~-lr~~~~~~L~ 282 (383)
T 3eg5_B 242 NALITPA---EELDFRVHIRSELMRLGLHQVLQE-LREIENEDMK 282 (383)
T ss_dssp HHHHTTC---CCHHHHHHHHHHHHHTTHHHHHHH-HTTSCCHHHH
T ss_pred HHHHcCC---CCHHHHHHHHHHHHHCChHHHHHH-HhcCCChhHH
Confidence 9998631 111 23455667788776665 444 354444
No 81
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=96.35 E-value=0.12 Score=48.45 Aligned_cols=166 Identities=12% Similarity=0.014 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHH-hcCCCCHHHHHHHHHHHHHHhc----cChHHHHHHHHcCcHHH
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVG-QLNHPDTDIRKISAWILGKASQ----NNPLVQKQVLELGALSK 220 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~-lL~s~~~~Ir~~Aa~~Lgt~aq----NNp~~Q~~~le~G~lp~ 220 (363)
+...+..+++.|...+++. ....+..+..+-.-+. -+.+++..+-..+..+|..+.. .+....++-. .-.+|.
T Consensus 59 d~k~~~~ale~L~~~l~~~-~~~~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea-~~~lP~ 136 (266)
T 2of3_A 59 DFKQHLAALDSLVRLADTS-PRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEV-SAFVPY 136 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHC-HHHHHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhC-hHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHHHH-HHHHHH
Confidence 5688888888888876642 1222222222221111 2236788898899888887753 2222222111 236899
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcc
Q 017926 221 LMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEP 300 (363)
Q Consensus 221 Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~ 300 (363)
|+.-+.+..+.+|.++-..+-.+..-+++. .-++.+...+++. +.|.|...+..+.++.... ...
T Consensus 137 LveKlGd~k~~vR~~~r~il~~l~~v~~~~-------~v~~~l~~g~ksK--N~R~R~e~l~~l~~li~~~----G~~-- 201 (266)
T 2of3_A 137 LLLKTGEAKDNMRTSVRDIVNVLSDVVGPL-------KMTPMLLDALKSK--NARQRSECLLVIEYYITNA----GIS-- 201 (266)
T ss_dssp HHHGGGCSSHHHHHHHHHHHHHHHHHHCHH-------HHHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHH----CSG--
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHCCHH-------HHHHHHHHHHccC--CHHHHHHHHHHHHHHHHhc----CCC--
Confidence 999998888888766555443333223331 1345677788887 5789999999999998642 111
Q ss_pred hhHHhCCcH---HHHHHhccCCChhHHHHHHHHHH
Q 017926 301 PLFRDRFFL---KSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 301 ~~l~~~g~v---~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
....+ +.+..++...|..+|+.|+.|+.
T Consensus 202 ----~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lv 232 (266)
T 2of3_A 202 ----PLKSLSVEKTVAPFVGDKDVNVRNAAINVLV 232 (266)
T ss_dssp ----GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHH
T ss_pred ----ccccccchHHHHHHHcCCCHHHHHHHHHHHH
Confidence 13468 99999999999999999999988
No 82
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=96.02 E-value=0.18 Score=45.44 Aligned_cols=140 Identities=14% Similarity=0.124 Sum_probs=103.2
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHH
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFY 255 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~ 255 (363)
+|.+..-+.-.++.+|..-+.+|+.++.+||..-.. .+.-+..|+.+.+..-+..|+.-|+++-.|++....
T Consensus 109 Vp~lfanyrigd~kikIn~~yaLeeIaranP~l~~~-----v~rdi~smltskd~~Dkl~aLnFi~alGen~~~yv~--- 180 (253)
T 2db0_A 109 IPVLFANYRIGDEKTKINVSYALEEIAKANPMLMAS-----IVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVN--- 180 (253)
T ss_dssp HHHHHHHSCCCSHHHHHHHHHHHHHHHHHCHHHHHH-----HHHHHHHHTSCSSHHHHHHHHHHHHTCCTTTHHHHG---
T ss_pred HHHHHHHHhcCCccceecHHHHHHHHHHhChHHHHH-----HHHHHHHHhcCCChHHHHHHHHHHHHHhccCccccC---
Confidence 444445556679999999999999999999986654 456788999988877788999999998766554332
Q ss_pred hcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhc
Q 017926 256 VEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCG 335 (363)
Q Consensus 256 ~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~ 335 (363)
-=++.|..+|.++ +.-+|..|+-.+.+|+. .++..++ ++...++-+...+..++.++-.+|....
T Consensus 181 --PfLprL~aLL~D~--deiVRaSaVEtL~~lA~-----~npklRk------ii~~kl~e~~D~S~lv~~~V~egL~rl~ 245 (253)
T 2db0_A 181 --PFLPRIINLLHDG--DEIVRASAVEALVHLAT-----LNDKLRK------VVIKRLEELNDTSSLVNKTVKEGISRLL 245 (253)
T ss_dssp --GGHHHHHGGGGCS--SHHHHHHHHHHHHHHHT-----SCHHHHH------HHHHHHHHCCCSCHHHHHHHHHHHHHHH
T ss_pred --cchHHHHHHHcCc--chhhhHHHHHHHHHHHH-----cCHHHHH------HHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3467888899987 67799999999999995 3433332 3444556667778888888888877444
Q ss_pred ccc
Q 017926 336 LVF 338 (363)
Q Consensus 336 ~~~ 338 (363)
+.+
T Consensus 246 l~e 248 (253)
T 2db0_A 246 LLE 248 (253)
T ss_dssp HC-
T ss_pred HHh
Confidence 433
No 83
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=95.55 E-value=0.48 Score=42.64 Aligned_cols=185 Identities=12% Similarity=0.139 Sum_probs=121.6
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhc-CCCCHHHHHHHHHHHHHHhccChHHH
Q 017926 131 QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQL-NHPDTDIRKISAWILGKASQNNPLVQ 209 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL-~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q 209 (363)
+.+++.+..|.+.-.+ .+..|+..+..+.+...-+ +. -.+.-|+.++ +++.-.+-..-+..+|.++.-||+.-
T Consensus 32 ~~l~~lI~~LDDDlwt--V~kNAl~vi~~i~~~~~el---~e-pl~~kL~vm~~ksEaIpltqeIa~a~G~la~i~Pe~v 105 (253)
T 2db0_A 32 SVLKKLIELLDDDLWT--VVKNAISIIMVIAKTREDL---YE-PMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELV 105 (253)
T ss_dssp HHHHHHHHHTTCSCHH--HHHHHHHHHHHHHTTCGGG---HH-HHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHhccHHHH--HHHhHHHHHHHHHHHhHHH---HH-HHHHHHHHHHhhcccCchHHHHHHHHhHHHHhCHHHH
Confidence 3445555555443222 2344555555555443211 10 0122334454 46677777788999999999999755
Q ss_pred HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 210 KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 210 ~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
. +.+|.|..-..-.++..+..--|+|.-|.|.||..... .+.-+..++.+++.. =|.-|+.+|..|..
T Consensus 106 ~-----~vVp~lfanyrigd~kikIn~~yaLeeIaranP~l~~~-----v~rdi~smltskd~~--Dkl~aLnFi~alGe 173 (253)
T 2db0_A 106 K-----SMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMAS-----IVRDFMSMLSSKNRE--DKLTALNFIEAMGE 173 (253)
T ss_dssp H-----HHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHCHHHHHH-----HHHHHHHHTSCSSHH--HHHHHHHHHHTCCT
T ss_pred H-----hhHHHHHHHHhcCCccceecHHHHHHHHHHhChHHHHH-----HHHHHHHHhcCCChH--HHHHHHHHHHHHhc
Confidence 4 46788888888889999999999999999999875533 345567778877433 35567777776653
Q ss_pred hhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcccccCchhhhhH
Q 017926 290 CQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGLVFCTCPCIVRG 347 (363)
Q Consensus 290 ~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~~~~~~~~~~r~ 347 (363)
. ....+ .-++|.|..+|..+|.-++-.+..+|...+ ...+. +|.
T Consensus 174 n--------~~~yv--~PfLprL~aLL~D~deiVRaSaVEtL~~lA---~~npk-lRk 217 (253)
T 2db0_A 174 N--------SFKYV--NPFLPRIINLLHDGDEIVRASAVEALVHLA---TLNDK-LRK 217 (253)
T ss_dssp T--------THHHH--GGGHHHHHGGGGCSSHHHHHHHHHHHHHHH---TSCHH-HHH
T ss_pred c--------Ccccc--CcchHHHHHHHcCcchhhhHHHHHHHHHHH---HcCHH-HHH
Confidence 2 12222 357899999999999999999999998444 33343 664
No 84
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=95.33 E-value=0.35 Score=45.18 Aligned_cols=199 Identities=17% Similarity=0.147 Sum_probs=134.1
Q ss_pred hHHHHhhHhhcCCCCCcccchhcccCCCHHHHHHhHHHHHH----HHHHcCCCCHHHHHHHHHHHhhc---CCCCH--HH
Q 017926 79 IDGMLQWAIGHSDPAKLKETAQDVQRLSPSELKKRQMEIKE----LMEKLKTPSDAQLIQIAIDDLNN---STLSL--ED 149 (363)
Q Consensus 79 l~~LL~wsi~~s~~~~~~~~~~~~~~~~~e~l~~r~~~Lke----al~~l~~~~d~~lmk~al~~L~~---~~~s~--e~ 149 (363)
++.+.+|-.+-.+|+.-..+-. +|-|||+-..+ ++.++| .-+.+++|.+.+.-. +..+. -+
T Consensus 2 ~~~i~qli~~L~~p~~Re~AL~--------eLsk~Re~~~~La~~LW~S~G--tia~LLQEIisiYp~lspp~Lt~~~Sn 71 (268)
T 2fv2_A 2 REKIYQWINELSSPETRENALL--------ELSKKRESVPDLAPMLWHSFG--TIAALLQEIVNIYPSINPPTLTAHQSN 71 (268)
T ss_dssp CHHHHHHHHHTSSTTTHHHHHH--------HHHHHTTTCTTHHHHHHHSTT--HHHHHHHHHHHTGGGBTTBCCCHHHHH
T ss_pred hHHHHHHHHHhcCchhHHHHHH--------HHHHhhhccccHHHHHHhccC--HHHHHHHHHHHHcccCCCcccCHHHHh
Confidence 4678889988888765211111 12223332222 344433 356788888887643 23332 23
Q ss_pred H-HHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCC-----CHHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHH
Q 017926 150 S-QRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHP-----DTDIRKISAWILGKASQ-NNPLVQKQVLELGALSKLM 222 (363)
Q Consensus 150 k-~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~-----~~~Ir~~Aa~~Lgt~aq-NNp~~Q~~~le~G~lp~Ll 222 (363)
| ..||--|...+.+.|....|.+.+---.|..+|+.. .+-+|-.+..+||.+++ +++++-..+++.+.+|..+
T Consensus 72 RVcnaLaLlQcvAshpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCL 151 (268)
T 2fv2_A 72 RVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCL 151 (268)
T ss_dssp HHHHHHHHHHHHHHCTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHH
Confidence 3 556666677778889999999987666777888653 36899999999999998 5788888889999999999
Q ss_pred HhhcCCCHHHHHHHHHHHHHHhcCCccc-------HHHHHhcC-cHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 223 KMVKSSFVEEAVKALYTVSSLIRNNLAG-------QEMFYVEA-GDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 223 ~LL~s~~~~v~~kAL~ALSsLiR~~~~a-------~~~f~~~g-G~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
+.+..+++--+.-|.|-+.-|+-+. .+ .+.|...+ -+..++.-+... .+.++-+.+......|+.
T Consensus 152 rime~GselSKtvAtfIlqKIL~dd-~GL~YiC~t~eRF~av~~vL~~mV~~l~~~-ps~RLLKhiircYlRLsd 224 (268)
T 2fv2_A 152 RIMESGSELSKTVATFILQKILLDD-TGLAYICQTYERFSHVAMILGKMVLQLSKE-PSARLLKHVVRCYLRLSD 224 (268)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHSH-HHHHHHTSSHHHHHHHHHHHHHHHHHTTTS-CCHHHHHHHHHHHHHHTT
T ss_pred HHHhhccHHHHHHHHHHHHHHhccc-hhHHHHHccHHHHHHHHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHhc
Confidence 9999999877888888888877543 33 24455433 233333333332 367888888887777764
No 85
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=95.17 E-value=0.3 Score=53.63 Aligned_cols=185 Identities=12% Similarity=0.143 Sum_probs=121.6
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHH-hc-CCHHHHHHhcCCCCHHHHHHHHHHHHHHhc--cC
Q 017926 130 AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLS-KL-GGLSVLVGQLNHPDTDIRKISAWILGKASQ--NN 205 (363)
Q Consensus 130 ~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~-~l-Ggl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aq--NN 205 (363)
..++...+..+.+.. .=..|..||+.+..+++.. ...+. .+ ..+|.+-.++....++|+..|..++..+|+ .|
T Consensus 132 ~~~~~~~~~~~~~~~-kw~~k~~~l~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n 208 (986)
T 2iw3_A 132 KALLPHLTNAIVETN-KWQEKIAILAAFSAMVDAA--KDQVALRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDN 208 (986)
T ss_dssp HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHh--HHHHHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCC
Confidence 344555666664432 4578999999999999854 22222 12 356666788888999999999999998887 45
Q ss_pred hHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHH
Q 017926 206 PLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVG 285 (363)
Q Consensus 206 p~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~ 285 (363)
..+. ..+|.|++.+.+++. .-+++..||+.. |......=.=+=-+++|.+.|... ...+++|++-.+.
T Consensus 209 ~d~~------~~~~~~~~~~~~p~~--~~~~~~~l~~~t--fv~~v~~~~l~~~~p~l~r~l~~~--~~~~~r~~~~~~~ 276 (986)
T 2iw3_A 209 KDIE------RFIPSLIQCIADPTE--VPETVHLLGATT--FVAEVTPATLSIMVPLLSRGLNER--ETGIKRKSAVIID 276 (986)
T ss_dssp TTTG------GGHHHHHHHHHCTTH--HHHHHHHHTTCC--CCSCCCHHHHHHHHHHHHHHHTSS--SHHHHHHHHHHHH
T ss_pred cchh------hhHHHHHHHhcChhh--hHHHHHHhhcCe--eEeeecchhHHHHHHHHHhhhccC--cchhheeeEEEEc
Confidence 5443 468999999998753 456788888742 222111100011246666667765 3457899999999
Q ss_pred HHhhhhhhcCCCCcchhHHhCCcHHHHHHhccC-CChhHHHHHHHHHHh
Q 017926 286 DLAKCQLENMHKVEPPLFRDRFFLKSVVDLTAS-ADLDLQEKVFLEHVF 333 (363)
Q Consensus 286 ~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~-~d~~lqE~al~aL~~ 333 (363)
|||.-. .+|.....|. ..++|.|-..... .|+++||.+.+|+..
T Consensus 277 n~~~lv---~~~~~~~~f~-~~l~p~~~~~~~~~~~pe~r~~~~~a~~~ 321 (986)
T 2iw3_A 277 NMCKLV---EDPQVIAPFL-GKLLPGLKSNFATIADPEAREVTLRALKT 321 (986)
T ss_dssp HHHTTC---CCHHHHHHHH-TTTHHHHHHHTTTCCSHHHHHHHHHHHHH
T ss_pred chhhhc---CCHHHHhhhh-hhhhhHHHHHhhccCCHHHHHHHHHHHHH
Confidence 999632 2333333332 4566666665554 499999999888773
No 86
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=95.09 E-value=2.2 Score=41.45 Aligned_cols=157 Identities=8% Similarity=0.023 Sum_probs=94.8
Q ss_pred HhHHHHHHHHHHcC-CCC-HH----HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCC
Q 017926 112 KRQMEIKELMEKLK-TPS-DA----QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNH 185 (363)
Q Consensus 112 ~r~~~Lkeal~~l~-~~~-d~----~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s 185 (363)
+.++-+++++-.+. |.+ .. .+.-..++.+.. .+.+.|.-..--+..+....+.+ | =....|.+-+++
T Consensus 43 kc~~~l~kll~l~~~G~~f~~~e~t~lf~~v~kl~~s--~d~~lKrLvYLyl~~~~~~~~e~--i---Lv~Nsl~kDl~~ 115 (355)
T 3tjz_B 43 KCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQS--NDPTLRRMCYLTIKEMSCIAEDV--I---IVTSSLTKDMTG 115 (355)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHTTTSSCG--G---GGHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCHHHH--H---HHHHHHHhhcCC
Confidence 45667777766542 322 11 122222333433 35566655555555555442221 1 135556677778
Q ss_pred CCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHH
Q 017926 186 PDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQD 265 (363)
Q Consensus 186 ~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~ 265 (363)
+++-+|..|..++|.+.. |+.-+. ..+.+-+.+.+.++.||.+|+.+...+++.+|+..+ +.++-+.+
T Consensus 116 ~N~~iR~lALRtL~~I~~--~~m~~~-----l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v~-----~~~~~l~~ 183 (355)
T 3tjz_B 116 KEDSYRGPAVRALCQITD--STMLQA-----IERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK-----RWVNEAQE 183 (355)
T ss_dssp SCHHHHHHHHHHHHHHCC--TTTHHH-----HHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHHHH-----TTHHHHHH
T ss_pred CcHhHHHHHHHHHhcCCC--HHHHHH-----HHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHHHH-----HHHHHHHH
Confidence 888888888888888864 323222 356677777787888888888888888877765432 45666777
Q ss_pred hhcCCCccHHHHHHHHHHHHHHhh
Q 017926 266 ILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 266 lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
++.+. +.-++-.|..++..+..
T Consensus 184 ll~d~--n~~V~~~Al~lL~ei~~ 205 (355)
T 3tjz_B 184 AASSD--NIMVQYHALGLLYHVRK 205 (355)
T ss_dssp HTTCS--SHHHHHHHHHHHHHHHT
T ss_pred HhcCC--CccHHHHHHHHHHHHHh
Confidence 77665 34566677777776653
No 87
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=94.70 E-value=0.062 Score=54.41 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=64.9
Q ss_pred CHHHHHHhcCC----------CCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHh
Q 017926 175 GLSVLVGQLNH----------PDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLI 244 (363)
Q Consensus 175 gl~~Li~lL~s----------~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLi 244 (363)
.+..|+.+|.+ .++.+.+-||.=||..++..|..+..+-+.|+=..+++|+.+++++||..||.|+.-++
T Consensus 396 llk~L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg~K~~VM~Lm~h~d~~Vr~~AL~avQklm 475 (480)
T 1ho8_A 396 IFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAII 475 (480)
T ss_dssp HHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHTSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 45677888863 47889999999999999999999998889999999999999999999999999999888
Q ss_pred cCC
Q 017926 245 RNN 247 (363)
Q Consensus 245 R~~ 247 (363)
.++
T Consensus 476 ~~~ 478 (480)
T 1ho8_A 476 GYT 478 (480)
T ss_dssp HHS
T ss_pred Hhc
Confidence 764
No 88
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=94.66 E-value=0.43 Score=43.33 Aligned_cols=157 Identities=17% Similarity=0.102 Sum_probs=104.4
Q ss_pred CCCchhhHHhcCCHHHHHHhcCC----C-------CHHHHHHHHHHHHHHhccChHHHHHHHHc-CcHHHHHHhhcCCCH
Q 017926 163 PIDNANDLSKLGGLSVLVGQLNH----P-------DTDIRKISAWILGKASQNNPLVQKQVLEL-GALSKLMKMVKSSFV 230 (363)
Q Consensus 163 ~iDnAn~l~~lGgl~~Li~lL~s----~-------~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~-G~lp~Ll~LL~s~~~ 230 (363)
+++.-..| ..||+..|+.+|.. . +..++..+..||..+. ||...-+.+++. +++..|...|.++..
T Consensus 33 ~~~Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalm-n~~~G~~~vl~~~~~i~~l~~~L~s~~~ 110 (233)
T 2f31_A 33 PVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM-NNKFGIKTMLETEEGILLLVRAMDPAVP 110 (233)
T ss_dssp CHHHHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHT-SSHHHHHHHHTSSSHHHHHHTTCCTTSH
T ss_pred CcHHHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHh-CChHHHHHHHcCcHHHHHHHHHhCCCCc
Confidence 45667777 46898888887742 1 4577888999998887 566666667665 789999999998888
Q ss_pred HHHHHHHHHHHHHhcCCc-cc-HHHHHh----------cCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCC-
Q 017926 231 EEAVKALYTVSSLIRNNL-AG-QEMFYV----------EAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHK- 297 (363)
Q Consensus 231 ~v~~kAL~ALSsLiR~~~-~a-~~~f~~----------~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~- 297 (363)
.++..++--|+.+|--.. .+ ...+.+ ..-+..+++.+++. .+..++..+..+|..|+... .+.
T Consensus 111 ~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~-~~~e~~~~~m~lIN~li~~~---~dl~ 186 (233)
T 2f31_A 111 NMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSG-TSIALKVGCLQLINALITPA---EELD 186 (233)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTT-SCHHHHHHHHHHHHHHHTTC---CCHH
T ss_pred hHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHHhcC-ChHHHHHHHHHHHHHHHCCC---CCHH
Confidence 888777766666654332 24 333322 12356788888754 36778999999999998631 111
Q ss_pred ---CcchhHHhCCcHHHHHHhccCCChhHHH
Q 017926 298 ---VEPPLFRDRFFLKSVVDLTASADLDLQE 325 (363)
Q Consensus 298 ---~~~~~l~~~g~v~~Lv~lL~~~d~~lqE 325 (363)
..+..|...|+.+.+-.+=...++++..
T Consensus 187 ~R~~lR~ef~~~Gl~~il~~l~~~~~~~L~~ 217 (233)
T 2f31_A 187 FRVHIRSELMRLGLHQVLQELREIENEDMKV 217 (233)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHCChHHHHHHHhccCCHHHHH
Confidence 2345566778876665554444555443
No 89
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=94.59 E-value=0.019 Score=58.21 Aligned_cols=88 Identities=18% Similarity=0.198 Sum_probs=69.3
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHhhcC--------CCCHHHHHHHHHHHHHcccCCCchhhHH-hcCCHHHHHHhcCCC
Q 017926 116 EIKELMEKLKTPSDAQLIQIAIDDLNNS--------TLSLEDSQRALQELLILVEPIDNANDLS-KLGGLSVLVGQLNHP 186 (363)
Q Consensus 116 ~Lkeal~~l~~~~d~~lmk~al~~L~~~--------~~s~e~k~~AL~~L~~Lve~iDnAn~l~-~lGgl~~Li~lL~s~ 186 (363)
|.+.+ ..|.. ++.+++|..++.|... +.++.....|+.++.++|....+.+.+. ++||=..+.++++|+
T Consensus 382 W~ENa-~kf~e-~~~~llk~L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg~K~~VM~Lm~h~ 459 (480)
T 1ho8_A 382 WSDNI-DEFKK-DNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHS 459 (480)
T ss_dssp HHHHS-GGGSS-GGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHTSCS
T ss_pred HHHHH-HHHHh-cchHHHHHHHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcCcHHHHHHHhcCC
Confidence 44444 45544 6899999999999742 2345567889999999999887766554 688888888999999
Q ss_pred CHHHHHHHHHHHHHHhccC
Q 017926 187 DTDIRKISAWILGKASQNN 205 (363)
Q Consensus 187 ~~~Ir~~Aa~~Lgt~aqNN 205 (363)
|++||..|..|+..+..+|
T Consensus 460 d~~Vr~~AL~avQklm~~~ 478 (480)
T 1ho8_A 460 DSRVKYEALKATQAIIGYT 478 (480)
T ss_dssp SHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999887654
No 90
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=94.48 E-value=1.9 Score=40.05 Aligned_cols=133 Identities=9% Similarity=0.079 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 146 SLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
+.++|+..|....+++-+.|.+ -+- .-++.++.+-.+++.++|...+..|..++...++... ..++.|..|+
T Consensus 28 ~~~~kl~~L~qa~el~~~~dp~-ll~--~~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~k~~l~~-----~~l~~L~~Ll 99 (257)
T 3gs3_A 28 SPSTKCELLAKVQETVLGSCAE-LAE--EFLESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELLP-----HVINVVSMLL 99 (257)
T ss_dssp CHHHHHHHHHHHHHHHTTTTGG-GHH--HHHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHccCHh-HHH--HHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 3479999999999977666533 222 2467778877778999999999999999976665433 4678899999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCc--------H-------HHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAG--------D-------LMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG--------~-------~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.++++.+..+++.+.+++-+ ...+.+...++ | ..+...+.+. +..+|..+.-++..+...
T Consensus 100 ~d~d~~V~K~~I~~~~~iY~---~~l~~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~--n~gvkl~~iKF~e~vIl~ 174 (257)
T 3gs3_A 100 RDNSAQVIKRVIQACGSIYK---NGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNE--NDGIRTNAIKFLEGVVVL 174 (257)
T ss_dssp TCSCHHHHHHHHHHHHHHHH---HHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSS--CHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHH---HHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHccC--CcchHHHHHHHHHHHHHh
Confidence 98888888888888888743 23333333222 2 2344456665 577899999999888754
Q ss_pred h
Q 017926 291 Q 291 (363)
Q Consensus 291 ~ 291 (363)
|
T Consensus 175 q 175 (257)
T 3gs3_A 175 Q 175 (257)
T ss_dssp T
T ss_pred h
Confidence 3
No 91
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=94.40 E-value=0.78 Score=42.81 Aligned_cols=194 Identities=16% Similarity=0.106 Sum_probs=120.7
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCC-CchhhHHhc-CCHHHHHH-------hcCCCC----HHHH-HHHHH
Q 017926 131 QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPI-DNANDLSKL-GGLSVLVG-------QLNHPD----TDIR-KISAW 196 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~i-DnAn~l~~l-Ggl~~Li~-------lL~s~~----~~Ir-~~Aa~ 196 (363)
+.|.+.+..|.++ +.|+.|+.+|..--|+. |.|--+-.. |-+..|++ .|..+. ..-| ..|..
T Consensus 3 ~~i~qli~~L~~p----~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLa 78 (268)
T 2fv2_A 3 EKIYQWINELSSP----ETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALA 78 (268)
T ss_dssp HHHHHHHHHTSST----TTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCc----hhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHHHHHcccCCCcccCHHHHhHHHHHHH
Confidence 4455666666665 45999999998877765 445555443 55555543 232221 2223 23333
Q ss_pred HHHHHhccChHHHHHHHHcCcHHHHHHhhcCCC-----HHHHHHHHHHHHHHhcCCcc-cHHHHHhcCcHHHHHHhhcCC
Q 017926 197 ILGKASQNNPLVQKQVLELGALSKLMKMVKSSF-----VEEAVKALYTVSSLIRNNLA-GQEMFYVEAGDLMLQDILGNS 270 (363)
Q Consensus 197 ~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~-----~~v~~kAL~ALSsLiR~~~~-a~~~f~~~gG~~~L~~lL~s~ 270 (363)
.+-.+| .||+.+..|++.+..--|...|+..+ +-+|..++.-|+++++...+ ...-+.+..-++...+.+...
T Consensus 79 LlQcvA-shpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLrime~G 157 (268)
T 2fv2_A 79 LLQCVA-SHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESG 157 (268)
T ss_dssp HHHHHH-HCTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHS
T ss_pred HHHHHH-cCcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhc
Confidence 334444 58999999999987666667776544 23588999999999997544 444455678899999999887
Q ss_pred CccHHHHHHHHHHHHHHhhhh--hhcCCCCcchhHH-hCCcHHHHHHhcc-CCChhHHHHHHHHHH
Q 017926 271 SFEIRLHRKAVSLVGDLAKCQ--LENMHKVEPPLFR-DRFFLKSVVDLTA-SADLDLQEKVFLEHV 332 (363)
Q Consensus 271 ~~~~klr~kA~~lL~~L~~~~--~~~~~~~~~~~l~-~~g~v~~Lv~lL~-~~d~~lqE~al~aL~ 332 (363)
+.-.|.-|.|.+..+.... +... -...++|. =..++..+|..+. .++..+..++.+|-.
T Consensus 158 --selSKtvAtfIlqKIL~dd~GL~Yi-C~t~eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYl 220 (268)
T 2fv2_A 158 --SELSKTVATFILQKILLDDTGLAYI-CQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYL 220 (268)
T ss_dssp --CHHHHHHHHHHHHHHHHSHHHHHHH-TSSHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHhccchhHHHH-HccHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 4557889999998887521 0000 01122221 1234444555443 457788888888765
No 92
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=94.30 E-value=0.86 Score=49.92 Aligned_cols=115 Identities=12% Similarity=0.018 Sum_probs=85.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCC---CHHHHHHHHHHHHHHh
Q 017926 126 TPSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHP---DTDIRKISAWILGKAS 202 (363)
Q Consensus 126 ~~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~---~~~Ir~~Aa~~Lgt~a 202 (363)
||-+++.+.+|++..-++.++.+.|..|.+-|+.+=+.. ++|.....+|.++ ++.+|..|+.+|-+..
T Consensus 1 ~~m~~~~v~~Al~~~~~p~sd~~~r~~A~~~L~~~q~sp---------~aw~~~~~iL~~~~~~~~~vr~fa~~~L~~~I 71 (980)
T 3ibv_A 1 GPMSAQDVENAVEAALDPSVGPIIKQQATDFIGSLRSSS---------TGWKICHEIFSEKTKYKPSTRLICLQTLSEKV 71 (980)
T ss_dssp --CHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHST---------THHHHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCh---------hHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 456777888899877788888999999988888765554 3889999999653 7999999999999988
Q ss_pred ccChHH----HHHHHHcCcHHHHHHhhc-CCCHHHHHHHHHHHHHHhcC-Ccc
Q 017926 203 QNNPLV----QKQVLELGALSKLMKMVK-SSFVEEAVKALYTVSSLIRN-NLA 249 (363)
Q Consensus 203 qNNp~~----Q~~~le~G~lp~Ll~LL~-s~~~~v~~kAL~ALSsLiR~-~~~ 249 (363)
+.-|.- +...++...+..+.+.-. .++..++.|...+++.++.. +|.
T Consensus 72 ~~l~~e~~~~~~~~lr~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p~ 124 (980)
T 3ibv_A 72 REWNNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPS 124 (980)
T ss_dssp HHCCTTTSHHHHHHHHHHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTTT
T ss_pred HhCChhhhHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhCcc
Confidence 744444 556666666666666211 23456899999999998875 444
No 93
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=94.14 E-value=1.5 Score=48.17 Aligned_cols=152 Identities=13% Similarity=0.136 Sum_probs=108.0
Q ss_pred HHHHHHHHHcccCCCchh--hHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHHHHhhcC
Q 017926 151 QRALQELLILVEPIDNAN--DLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQN-NPLVQKQVLELGALSKLMKMVKS 227 (363)
Q Consensus 151 ~~AL~~L~~Lve~iDnAn--~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqN-Np~~Q~~~le~G~lp~Ll~LL~s 227 (363)
+.|+..+..+++....+. .-.-++.++.++..+.+....||..|..++-+++++ ||..- ...+|.|+..+++
T Consensus 70 ~~a~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~-----~~~~~~~~~~~~~ 144 (986)
T 2iw3_A 70 ANAMQAVAHIANQSNLSPSVEPYIVQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI-----KALLPHLTNAIVE 144 (986)
T ss_dssp HHHHHHHHHHTCTTTCCTTTHHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH-----HHHHHHHHHHhcc
Confidence 777888888876553322 223347788889988888899999999999888885 55443 3468999999976
Q ss_pred CC-HHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhC
Q 017926 228 SF-VEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDR 306 (363)
Q Consensus 228 ~~-~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~ 306 (363)
.. =..+..|+..|..++...+ .+-...--..++.+..++.+.+ ..++..|...+..+|... .+.+. .
T Consensus 145 ~~kw~~k~~~l~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~d~k--~~v~~~~~~~~~~~~~~~---~n~d~------~ 212 (986)
T 2iw3_A 145 TNKWQEKIAILAAFSAMVDAAK-DQVALRMPELIPVLSETMWDTK--KEVKAAATAAMTKATETV---DNKDI------E 212 (986)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHTTCSS--HHHHHHHHHHHHHHGGGC---CCTTT------G
T ss_pred ccchHHHHHHHHHHHHHHHHhH-HHHHHhccchhcchHhhcccCc--HHHHHHHHHHHHHHHhcC---CCcch------h
Confidence 54 3568889999999997653 2222222467899999998863 458888888899888642 23332 2
Q ss_pred CcHHHHHHhccCC
Q 017926 307 FFLKSVVDLTASA 319 (363)
Q Consensus 307 g~v~~Lv~lL~~~ 319 (363)
.++|.|++++.++
T Consensus 213 ~~~~~~~~~~~~p 225 (986)
T 2iw3_A 213 RFIPSLIQCIADP 225 (986)
T ss_dssp GGHHHHHHHHHCT
T ss_pred hhHHHHHHHhcCh
Confidence 4567777777765
No 94
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=93.41 E-value=2.6 Score=41.14 Aligned_cols=157 Identities=17% Similarity=0.100 Sum_probs=103.5
Q ss_pred CCCchhhHHhcCCHHHHHHhcCC-----------CCHHHHHHHHHHHHHHhccChHHHHHHHHc-CcHHHHHHhhcCCCH
Q 017926 163 PIDNANDLSKLGGLSVLVGQLNH-----------PDTDIRKISAWILGKASQNNPLVQKQVLEL-GALSKLMKMVKSSFV 230 (363)
Q Consensus 163 ~iDnAn~l~~lGgl~~Li~lL~s-----------~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~-G~lp~Ll~LL~s~~~ 230 (363)
+++.-..|. .+|+..|+.+|.. .+..+...+..||..+. ||...-+.++.. +++..|...|.+...
T Consensus 37 ~~~Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalm-N~~~Gl~~vl~~~~~i~~l~~sL~s~~~ 114 (386)
T 2bnx_A 37 PVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM-NNKFGIKTMLETEEGILLLVRAMDPAVP 114 (386)
T ss_dssp CHHHHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHT-SSHHHHHHHHHSSSHHHHHHHTCCTTSH
T ss_pred CcHHHHHHH-HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHh-CCHHHHHHHHcCcHHHHHHHHHhCCCCc
Confidence 346667775 6888888877741 14577888999998887 555556666665 789999999998888
Q ss_pred HHHHHHHHHHHHHhcCCc-cc-HHHHHh----------cCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCC-
Q 017926 231 EEAVKALYTVSSLIRNNL-AG-QEMFYV----------EAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHK- 297 (363)
Q Consensus 231 ~v~~kAL~ALSsLiR~~~-~a-~~~f~~----------~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~- 297 (363)
.++..++--|+.+|--.. .+ ...+++ ..=+..|+..+... .+..++..++.+|..|+... .+-
T Consensus 115 ~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~-~~~e~~~a~m~lIN~lv~~~---~dl~ 190 (386)
T 2bnx_A 115 NMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSG-TSIALKVGCLQLINALITPA---EELD 190 (386)
T ss_dssp HHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTT-SCHHHHHHHHHHHHHHHTTC---SCHH
T ss_pred hHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHHcC-ChHHHHHHHHHHHHHHHCCC---CCHH
Confidence 887777666666554332 23 332221 22466788888754 35678999999999998631 111
Q ss_pred ---CcchhHHhCCcHHHHHHhccCCChhHHH
Q 017926 298 ---VEPPLFRDRFFLKSVVDLTASADLDLQE 325 (363)
Q Consensus 298 ---~~~~~l~~~g~v~~Lv~lL~~~d~~lqE 325 (363)
..+..|...|+.+.+-.+=...++++..
T Consensus 191 ~R~~LR~Ef~~~GL~~il~~Lr~~~~~~L~~ 221 (386)
T 2bnx_A 191 FRVHIRSELMRLGLHQVLQELREIENEDMKV 221 (386)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHCChHHHHHHHhccCChhHHH
Confidence 2345667778877765554444555443
No 95
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=93.39 E-value=1.5 Score=48.07 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcc-cCCCchhhHHhcCCHHHHHHhc-CCCCHHHHHHHHHHHHHHhccC
Q 017926 128 SDAQLIQIAIDDLNNSTLSLEDSQRALQELLILV-EPIDNANDLSKLGGLSVLVGQL-NHPDTDIRKISAWILGKASQNN 205 (363)
Q Consensus 128 ~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lv-e~iDnAn~l~~lGgl~~Li~lL-~s~~~~Ir~~Aa~~Lgt~aqNN 205 (363)
.+...+++.+..+.+. .+.+.|..|...|..+. .+. ..++.++..| ++.++.+|..|++++|.++..|
T Consensus 574 Gn~~aIq~LL~~~~~d-~~d~VRraAViaLGlI~~g~~---------e~v~rlv~~L~~~~d~~VR~gAalALGli~aGn 643 (963)
T 4ady_A 574 GNNSAVKRLLHVAVSD-SNDDVRRAAVIALGFVLLRDY---------TTVPRIVQLLSKSHNAHVRCGTAFALGIACAGK 643 (963)
T ss_dssp CCHHHHHHHHHHHHHC-SCHHHHHHHHHHHHHHTSSSC---------SSHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSS
T ss_pred CCHHHHHHHHHHhccC-CcHHHHHHHHHHHHhhccCCH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCC
Confidence 3456677777776643 35567777888887642 222 2456677644 6789999999999999999887
Q ss_pred hHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCccc
Q 017926 206 PLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAG 250 (363)
Q Consensus 206 p~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a 250 (363)
|. ..++..|..+.++.+..||..|+.||+-+.-++..+
T Consensus 644 ~~-------~~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig~gtnna 681 (963)
T 4ady_A 644 GL-------QSAIDVLDPLTKDPVDFVRQAAMIALSMILIQQTEK 681 (963)
T ss_dssp CC-------HHHHHHHHHHHTCSSHHHHHHHHHHHHHHSTTCCTT
T ss_pred Cc-------HHHHHHHHHHccCCCHHHHHHHHHHHHHHhcCCccc
Confidence 73 124677888888888999999999999988765554
No 96
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=93.27 E-value=1.1 Score=48.88 Aligned_cols=101 Identities=5% Similarity=-0.006 Sum_probs=65.1
Q ss_pred cHHHHHHhhc-CCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcC
Q 017926 217 ALSKLMKMVK-SSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENM 295 (363)
Q Consensus 217 ~lp~Ll~LL~-s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~ 295 (363)
.+|.++.+|. +.++.+|..|.+||+-+.-+++. ...++.|..+++++ +..+|..|++.+.-+... .
T Consensus 612 ~v~rlv~~L~~~~d~~VR~gAalALGli~aGn~~-------~~aid~L~~L~~D~--d~~Vrq~Ai~ALG~Ig~g----t 678 (963)
T 4ady_A 612 TVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGL-------QSAIDVLDPLTKDP--VDFVRQAAMIALSMILIQ----Q 678 (963)
T ss_dssp SHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCC-------HHHHHHHHHHHTCS--SHHHHHHHHHHHHHHSTT----C
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCCc-------HHHHHHHHHHccCC--CHHHHHHHHHHHHHHhcC----C
Confidence 4577776554 45677888888888888776653 12455777777765 667999999999988763 2
Q ss_pred CCCcchhHHhCCcHHHHHHhccC--CChhHHHHHHHHHH
Q 017926 296 HKVEPPLFRDRFFLKSVVDLTAS--ADLDLQEKVFLEHV 332 (363)
Q Consensus 296 ~~~~~~~l~~~g~v~~Lv~lL~~--~d~~lqE~al~aL~ 332 (363)
++...+.+. .+.+.|...... .|...+=.+.-|.+
T Consensus 679 nna~~~rva--~~l~~L~~~~~dk~~d~~~~fga~iAqG 715 (963)
T 4ady_A 679 TEKLNPQVA--DINKNFLSVITNKHQEGLAKFGACVAQG 715 (963)
T ss_dssp CTTTCTTHH--HHHHHHHHHHHCSSSCHHHHHHHHHHHH
T ss_pred ccccchHHH--HHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence 333333332 355667777754 35656655555544
No 97
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=92.96 E-value=3.5 Score=40.50 Aligned_cols=147 Identities=14% Similarity=0.100 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHH
Q 017926 130 AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQ 209 (363)
Q Consensus 130 ~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q 209 (363)
-+.+-+.+....... .++|+..|..+.+++=+.|. .-+ -+-++.++.+-...+.+||...+..|..++...++..
T Consensus 24 ~~~v~~lln~A~~~~--~~~Kl~~L~q~~EL~l~~dp-sLl--~~fl~~il~f~~d~~~~vRk~~a~FieEa~~~~~el~ 98 (386)
T 3o2t_A 24 SERVVDLLNQAALIT--NDSKITVLKQVQELIINKDP-TLL--DNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELL 98 (386)
T ss_dssp HHHHHHHHHHHHHCC--STHHHHHHHHHHHHHHTTCG-GGG--GGGHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHhhhccC--hHHHHHHHHHHHHHHhccCH-HHH--HHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444432 25799999999997554443 122 2457888998888899999999999999997655443
Q ss_pred HHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCc--------HH-------HHHHhhcCCCccH
Q 017926 210 KQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAG--------DL-------MLQDILGNSSFEI 274 (363)
Q Consensus 210 ~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG--------~~-------~L~~lL~s~~~~~ 274 (363)
..+++.|..||.++++.+..+++.+.+++- +...+.++..++ |+ .++..+.+. +.
T Consensus 99 -----~~~l~~L~~LL~d~d~~V~K~~I~~~tslY---pl~f~~i~~~~~~~~~~e~~W~~m~~lK~~Il~~~ds~--n~ 168 (386)
T 3o2t_A 99 -----LKLIANLNMLLRDENVNVVKKAILTMTQLY---KVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSD--ND 168 (386)
T ss_dssp -----HHHHHHHHHHHTCSSHHHHHHHHHHHHHHH---HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHGGGCS--SH
T ss_pred -----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH---HHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHhccC--Cc
Confidence 245788889998888888888888888874 333333333322 32 344445655 57
Q ss_pred HHHHHHHHHHHHHhhhh
Q 017926 275 RLHRKAVSLVGDLAKCQ 291 (363)
Q Consensus 275 klr~kA~~lL~~L~~~~ 291 (363)
.+|..++-++..++..|
T Consensus 169 GVrl~aiKFle~VIl~q 185 (386)
T 3o2t_A 169 GIRTHAIKFVEGLIVTL 185 (386)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHh
Confidence 78999999998887543
No 98
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=92.52 E-value=4.9 Score=38.77 Aligned_cols=184 Identities=14% Similarity=0.105 Sum_probs=128.1
Q ss_pred CCHHHHHHHHHHHHHcccCC-Cc----hhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcH
Q 017926 145 LSLEDSQRALQELLILVEPI-DN----ANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQNNPLVQKQVLELGAL 218 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~i-Dn----An~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~l 218 (363)
.+.|.|..+...+..++..- +. ..-++. --..+.-++. .+++++--.+-.+|..|.. ++.+...++..+.+
T Consensus 90 L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~--~peil~~L~~gYe~~diAl~~G~mLRecir-~e~la~~iL~~~~f 166 (341)
T 1upk_A 90 IDFEGKKDVAQIFNNILRRQIGTRTPTVEYICT--QQNILFMLLKGYESPEIALNCGIMLRECIR-HEPLAKIILWSEQF 166 (341)
T ss_dssp SCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHT--CTHHHHHHHHGGGSTTTHHHHHHHHHHHHT-SHHHHHHHHHSGGG
T ss_pred CCchhhccHHHHHHHHHhcccCCCCchhHHHHc--CHHHHHHHHHhhccchhHhHHHHHHHHHHH-hHHHHHHHhccHHH
Confidence 35677777766666665543 21 111111 1111112221 2456777777778888876 67788888888899
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCc---HHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcC
Q 017926 219 SKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAG---DLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENM 295 (363)
Q Consensus 219 p~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG---~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~ 295 (363)
..+.+.+..++-++...|...+-.++..|......|+..+= +.....+|.+++ --.|+.++-||+.|.... .
T Consensus 167 ~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~N--YVTkRQSlKLLgelLldr---~ 241 (341)
T 1upk_A 167 YDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSEN--YVTKRQSLKLLGELLLDR---H 241 (341)
T ss_dssp GHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSS--HHHHHHHHHHHHHHHHSG---G
T ss_pred HHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCc--chhHHHHHHHHHHHHhCc---h
Confidence 99999999988899999999999988888887888887552 466777888874 457999999999998631 2
Q ss_pred CCCcch-hHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcc
Q 017926 296 HKVEPP-LFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGL 336 (363)
Q Consensus 296 ~~~~~~-~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~ 336 (363)
+..... .+-+..-++.++.+|+.....+|-.|-+......+
T Consensus 242 N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVA 283 (341)
T 1upk_A 242 NFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVA 283 (341)
T ss_dssp GHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeee
Confidence 222222 23345778999999999999999888887664444
No 99
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=92.45 E-value=1.7 Score=46.74 Aligned_cols=132 Identities=9% Similarity=0.121 Sum_probs=81.9
Q ss_pred CHHHHHHHHHHHHHcccCCCchh--hHHhcCCHHHHHHhcC--CCCHHHHHHHHHHHHHHhc---cChHHHHHHHHcCcH
Q 017926 146 SLEDSQRALQELLILVEPIDNAN--DLSKLGGLSVLVGQLN--HPDTDIRKISAWILGKASQ---NNPLVQKQVLELGAL 218 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iDnAn--~l~~lGgl~~Li~lL~--s~~~~Ir~~Aa~~Lgt~aq---NNp~~Q~~~le~G~l 218 (363)
+-.+++.++-.+..+.+...... .+.. .++ ++..|. .+++.||..++|+||..+. .+|+ .+ ..++
T Consensus 477 ~w~~~eaal~~l~~iae~~~~~~~~~l~~--l~~-~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~----~l-~~vl 548 (971)
T 2x1g_F 477 HWTKLEACIYSFQSVAEHFGGEEKRQIPR--LMR-VLAEIPYEKLNVKLLGTALETMGSYCNWLMENPA----YI-PPAI 548 (971)
T ss_dssp CCHHHHHHHHHHHHTTTC------CHHHH--HHH-HHHHSCTTTSCHHHHHHHHHHHHHTHHHHC--------CH-HHHH
T ss_pred cHHHHHHHHHHHHHHHhhcChhhhHHHHH--HHH-HHHhcCccccCHHHHHHHHHHHHHHHHHHhcCHH----HH-HHHH
Confidence 44678888888888877654221 1111 123 333334 3489999999999998874 2331 11 1456
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 219 SKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 219 p~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
|.|+..++ +.++..|.+|+..+++.......-++ ..-++.|..++..+..+...+..+...+..++.
T Consensus 549 ~~l~~~l~---~~v~~~A~~al~~l~~~~~~~l~p~~-~~ll~~l~~~l~~~~~~~~~~~~~~~ai~~i~~ 615 (971)
T 2x1g_F 549 NLLVRGLN---SSMSAQATLGLKELCRDCQLQLKPYA-DPLLNACHASLNTGRMKNSDSVRLMFSIGKLMS 615 (971)
T ss_dssp HHHHHHHH---SSCHHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC---hHHHHHHHHHHHHHHHHHHHhccccH-HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHH
Confidence 77777773 46799999999999987653322222 134566677777654456778888888888875
No 100
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=92.02 E-value=0.99 Score=48.74 Aligned_cols=176 Identities=9% Similarity=-0.008 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHHHHcccCCC----chh------hHHhcCCHHHHHHhcCCC---CHHHHHHHHHHHHHHhccChHHHHHH
Q 017926 146 SLEDSQRALQELLILVEPID----NAN------DLSKLGGLSVLVGQLNHP---DTDIRKISAWILGKASQNNPLVQKQV 212 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~iD----nAn------~l~~lGgl~~Li~lL~s~---~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~ 212 (363)
+-..|..|+-.+..+.+... ... ++... ....++..|+++ ++-+|..|+|+||..+..-+ ...
T Consensus 418 ~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~-l~~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~~---~~~ 493 (960)
T 1wa5_C 418 NWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDF-FTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLT---KAQ 493 (960)
T ss_dssp CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHH-HHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSC---HHH
T ss_pred hHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHH-HHHHhHHHhcCCCCCCceehHHHHHHHHHHHhhCC---HHH
Confidence 44677788887777755321 111 12110 011234555666 89999999999999987421 222
Q ss_pred HHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCc-------c-cHHHHHh--cCcHHHHHHhhcCCC-ccHH--HHHH
Q 017926 213 LELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNL-------A-GQEMFYV--EAGDLMLQDILGNSS-FEIR--LHRK 279 (363)
Q Consensus 213 le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~-------~-a~~~f~~--~gG~~~L~~lL~s~~-~~~k--lr~k 279 (363)
-...++.+++.|.+++..|+..|.+||.+++.+.. . ....+.. ..-++.|..++.... .+.+ ....
T Consensus 494 -l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~ 572 (960)
T 1wa5_C 494 -LIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEF 572 (960)
T ss_dssp -HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHH
T ss_pred -HHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhcccccccccccccHHHhhhhHHHHHHHHHHHHHhccCCCCcccccHH
Confidence 23468889998888788899999999999997521 1 1122221 133455666666531 0111 1234
Q ss_pred HHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhcc----C-CChhHHHHHHHHHH
Q 017926 280 AVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTA----S-ADLDLQEKVFLEHV 332 (363)
Q Consensus 280 A~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~----~-~d~~lqE~al~aL~ 332 (363)
+..+|..++.. ..++..+.+. .+++.|...+. + ++..++..++.++.
T Consensus 573 l~~al~~vv~~----~~~~~~p~~~--~l~~~L~~~l~~~~~~~~~~~~~~~~~e~l~ 624 (960)
T 1wa5_C 573 LMRSIFRVLQT----SEDSIQPLFP--QLLAQFIEIVTIMAKNPSNPRFTHYTFESIG 624 (960)
T ss_dssp HHHHHHHHHHH----HTTTTGGGHH--HHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----HHHhhhhHHH--HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 55666666542 1233344322 24444444442 2 36667766777766
No 101
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=91.57 E-value=3.7 Score=44.24 Aligned_cols=188 Identities=10% Similarity=0.092 Sum_probs=109.2
Q ss_pred HHHHHhhcCC-CCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccC-------h
Q 017926 135 IAIDDLNNST-LSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNN-------P 206 (363)
Q Consensus 135 ~al~~L~~~~-~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNN-------p 206 (363)
..+..+.++. ..+--|..|+..+..+.+.+. ...+. ..++.++..|.++++.||..||++|.+++.+. +
T Consensus 459 ~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~~-~~~l~--~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~ 535 (960)
T 1wa5_C 459 EIAPDLTSNNIPHIILRVDAIKYIYTFRNQLT-KAQLI--ELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAF 535 (960)
T ss_dssp HTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSC-HHHHH--HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCB
T ss_pred HhHHHhcCCCCCCceehHHHHHHHHHHHhhCC-HHHHH--HHHHHHHHHhCCCChhHHHHHHHHHHHHHhcccccccccc
Confidence 3455565542 256778889999999988763 22222 34777888888889999999999999988741 1
Q ss_pred H-HHHHHHH--cCcHHHHHHhhcCCC---HH--HHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhh----cCCCccH
Q 017926 207 L-VQKQVLE--LGALSKLMKMVKSSF---VE--EAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDIL----GNSSFEI 274 (363)
Q Consensus 207 ~-~Q~~~le--~G~lp~Ll~LL~s~~---~~--v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL----~s~~~~~ 274 (363)
. .+..+.. ...++.|+.++.... .. ....++.||+.++.........+.. .-++.|...+ +++ .+.
T Consensus 536 ~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p~~~-~l~~~L~~~l~~~~~~~-~~~ 613 (960)
T 1wa5_C 536 IFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFP-QLLAQFIEIVTIMAKNP-SNP 613 (960)
T ss_dssp SSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHH-HHHHHHHHHHHHHTTSC-CCH
T ss_pred cccHHHhhhhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHhCC-CCc
Confidence 2 1222222 145677777877741 11 2345667777666543322222211 1223333333 333 355
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 275 RLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 275 klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.++....-+|+.++.. .+++....+ ...+++.+...|.....++.+.+...+.
T Consensus 614 ~~~~~~~e~l~~l~~~----~~~~~~~~~-~~~~~p~~~~iL~~~~~~~~~~~~~i~~ 666 (960)
T 1wa5_C 614 RFTHYTFESIGAILNY----TQRQNLPLL-VDSMMPTFLTVFSEDIQEFIPYVFQIIA 666 (960)
T ss_dssp HHHHHHHHHHHHHHHT----SCGGGHHHH-HHHHHHHHHHHHHTTCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc----CCcchHHHH-HHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 6666777778777752 233333333 3456677777777665566666655544
No 102
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=91.20 E-value=10 Score=35.81 Aligned_cols=208 Identities=11% Similarity=0.058 Sum_probs=117.7
Q ss_pred cCCCHHHHHHhHHHHHHHHHHcC-----CCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHH
Q 017926 103 QRLSPSELKKRQMEIKELMEKLK-----TPSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLS 177 (363)
Q Consensus 103 ~~~~~e~l~~r~~~Lkeal~~l~-----~~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~ 177 (363)
-+++|+++. -|+++++.+. .+++ ..+.-..+++ ..+.+.+.-++|-+.-++-+.+.+.-|..-+.-.
T Consensus 75 ~~Ls~~el~----~L~~l~~~l~~~s~~~~~~-~~l~~l~kil---~WP~~~~fPvLDLlRl~~l~p~~~~~~~~~~~~~ 146 (304)
T 3ebb_A 75 KKLTEDDLI----LLEKILSLICNSSSEKPTV-QQLQILWKAI---NCPEDIVFPALDILRLSIKHPSVNENFCNEKEGA 146 (304)
T ss_dssp GCCCHHHHH----HHHHHHHHHHTTCSSCCCH-HHHHHHHHHH---TSCTTTCHHHHHHHHHHTTSHHHHHHHHSTTTHH
T ss_pred cCcCHHHHH----HHHHHHHHHhccCCCccch-HHHHHHHHHH---cCCHHhHHHHHHHHHHHHcCccHHHHhhccccch
Confidence 358998775 3444444332 2232 2333344444 4566788899999998877666555555443333
Q ss_pred HHH----HhcCC-CCHHHHHHHHHHHHHHhccChHHHHHHHHc--CcHHHHHHhhcCCCHHHHH---HHHHHHHHHhcCC
Q 017926 178 VLV----GQLNH-PDTDIRKISAWILGKASQNNPLVQKQVLEL--GALSKLMKMVKSSFVEEAV---KALYTVSSLIRNN 247 (363)
Q Consensus 178 ~Li----~lL~s-~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~--G~lp~Ll~LL~s~~~~v~~---kAL~ALSsLiR~~ 247 (363)
.++ ..+++ ..+..+..++++++++..+ +..++.++.. ..++.+...+.+.+..++. ..++-+|....+.
T Consensus 147 ~l~~~l~~~~~~~~~p~n~ml~lR~l~NlF~~-~~g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~ 225 (304)
T 3ebb_A 147 QFSSHLINLLNPKGKPANQLLALRTFCNCFVG-QAGQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKD 225 (304)
T ss_dssp HHHHHHHHTTCTTSCHHHHHHHHHHHHHGGGS-HHHHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHccCC-chhHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhc
Confidence 333 44432 4567799999999999975 5566666643 3445555555555666654 4556566554432
Q ss_pred cccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCC-ChhHHHH
Q 017926 248 LAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASA-DLDLQEK 326 (363)
Q Consensus 248 ~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~-d~~lqE~ 326 (363)
.. .+.-. --+..+..++... .+....-+.+-++.+|+. .+++..+.....|+-..+-...... ...+.|.
T Consensus 226 ~~-~~~~~--~ll~~l~~il~~~-~d~EalyR~LvALGtL~~-----~~~~~~~lak~l~~~~~v~~~~~~~~~~kv~~~ 296 (304)
T 3ebb_A 226 HN-IEGKA--QCLSLISTILEVV-QDLEATFRLLVALGTLIS-----DDSNAVQLAKSLGVDSQIKKYSSVSEPAKVSEC 296 (304)
T ss_dssp CC-HHHHH--HHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHT-----TCHHHHHHHHHTTHHHHGGGGGGCCSSHHHHHH
T ss_pred CC-chHHH--HHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHh-----CChhHHHHHHHcCHHHHHHHHHhCCCchhHHHH
Confidence 22 11111 1344555556543 355577788999999985 3444444445556655444444442 4455554
Q ss_pred HH
Q 017926 327 VF 328 (363)
Q Consensus 327 al 328 (363)
+-
T Consensus 297 ~~ 298 (304)
T 3ebb_A 297 CR 298 (304)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 103
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=91.11 E-value=2.4 Score=38.63 Aligned_cols=138 Identities=10% Similarity=0.092 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHHHHcccCCCchh---hH-Hh--cCCHHHHHH-hcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcC
Q 017926 144 TLSLEDSQRALQELLILVEPIDNAN---DL-SK--LGGLSVLVG-QLNHPDTDIRKISAWILGKASQNNPLVQKQVLELG 216 (363)
Q Consensus 144 ~~s~e~k~~AL~~L~~Lve~iDnAn---~l-~~--lGgl~~Li~-lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G 216 (363)
+...-....+++.+..+++....+. .+ .. -..++.|+. +|.++.+.+|..|..++-.++....... -
T Consensus 66 DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~------~ 139 (278)
T 4ffb_C 66 DSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSIT------Q 139 (278)
T ss_dssp CSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSH------H
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHH------H
Confidence 4456677788888888887654321 11 11 234566664 6888999999999998887764321111 1
Q ss_pred cHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCccc---HHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 217 ALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAG---QEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 217 ~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a---~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
.++.++..+++.++.++..++..|+.+++.+... ...++. ..++.+..++.+. +..||..|..++..+...
T Consensus 140 ~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~~~k~~l~-~i~~~l~k~l~d~--~~~VR~aA~~l~~~ly~~ 213 (278)
T 4ffb_C 140 SVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNVNVQTFLP-ELLKHVPQLAGHG--DRNVRSQTMNLIVEIYKV 213 (278)
T ss_dssp HHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHH-HHGGGHHHHHTCS--SHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcCCchhHHH-HHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHH
Confidence 2456667788888999999999999998864321 111111 2234566677776 677999999999988764
No 104
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=90.98 E-value=1.5 Score=46.96 Aligned_cols=135 Identities=15% Similarity=0.147 Sum_probs=83.6
Q ss_pred CCHHHHHHHHHHHHHcccCCCc-hhhHHhcCCHHHHHHh---cCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHH
Q 017926 145 LSLEDSQRALQELLILVEPIDN-ANDLSKLGGLSVLVGQ---LNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSK 220 (363)
Q Consensus 145 ~s~e~k~~AL~~L~~Lve~iDn-An~l~~lGgl~~Li~l---L~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~ 220 (363)
.+-..++.++-.+..+.+..+. ...+ ++.++.. +.++++.||..++|+||..+.--.... .++ ...++.
T Consensus 461 ~~w~~~eaal~al~~i~~~~~~~~~~~-----l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~~~l~~~~-~~l-~~vl~~ 533 (963)
T 2x19_B 461 YSWQHTEALLYGFQSIAETIDVNYSDV-----VPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHP-VMI-NSVLPL 533 (963)
T ss_dssp CCHHHHHHHHHHHHHHTTSCCSSCCSH-----HHHHHHHGGGSCCCSHHHHHHHHHHHHHTHHHHHHCH-HHH-TTTHHH
T ss_pred CchHHHHHHHHHHHHHHhhcCchhhHH-----HHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHhCH-HHH-HHHHHH
Confidence 4567777788777777776532 1111 2333333 244688999999999998875211111 222 378899
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 221 LMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 221 Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
|+..+.+ +.++..|.+|+..+++..+....-+. ..-++.|..++.....+...+..+...+..++.
T Consensus 534 l~~~l~~--~~V~~~A~~al~~l~~~~~~~l~p~~-~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~ 599 (963)
T 2x19_B 534 VLHALGN--PELSVSSVSTLKKICRECKYDLPPYA-ANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLS 599 (963)
T ss_dssp HHHHTTC--GGGHHHHHHHHHHHHHHTGGGCTTTH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHhCC--chHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhccCCCChHHHHHHHHHHHHHHh
Confidence 9988865 67899999999999986543221111 122344555565432345567777777777764
No 105
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=90.90 E-value=0.95 Score=39.09 Aligned_cols=66 Identities=12% Similarity=0.140 Sum_probs=53.3
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHhhcC-CCHHHHHHHHHHHHHH
Q 017926 178 VLVGQLNHPDTDIRKISAWILGKASQNN-PLVQKQVLELGALSKLMKMVKS-SFVEEAVKALYTVSSL 243 (363)
Q Consensus 178 ~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp~Ll~LL~s-~~~~v~~kAL~ALSsL 243 (363)
.|..-|++.++.++.+|..+|-++++|. +..+..+.....+..|+++++. .++.|+.|++.-|-.-
T Consensus 56 al~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W 123 (163)
T 1x5b_A 56 AIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEW 123 (163)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 4556678889999999999999999994 7788788778889999999975 4567888887766543
No 106
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=90.61 E-value=2.2 Score=43.27 Aligned_cols=75 Identities=12% Similarity=0.155 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHH
Q 017926 185 HPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQ 264 (363)
Q Consensus 185 s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~ 264 (363)
..++..+..||..|......-|..|+. +|..+++|..+++..+|+.|+..|..+|++ .... .-.++|.
T Consensus 39 kg~~k~K~LaaQ~I~kffk~FP~l~~~-----Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~--~~i~-----kiaDvL~ 106 (507)
T 3u0r_A 39 KGGTKEKRLAAQFIPKFFKHFPELADS-----AINAQLDLCEDEDVSIRRQAIKELPQFATG--ENLP-----RVADILT 106 (507)
T ss_dssp GSCHHHHHHHHHHHHHHGGGCGGGHHH-----HHHHHHHHHTCSSHHHHHHHHHHGGGGCCT--TCHH-----HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhChhhHHH-----HHHHHHHHHhcccHHHHHHHHHhhHHHhhh--hhhh-----hHHHHHH
Confidence 347999999999999999999999987 567899999999999999999999999997 3332 3456889
Q ss_pred HhhcCCC
Q 017926 265 DILGNSS 271 (363)
Q Consensus 265 ~lL~s~~ 271 (363)
++|+++.
T Consensus 107 QlLqtdd 113 (507)
T 3u0r_A 107 QLLQTDD 113 (507)
T ss_dssp HHTTCCC
T ss_pred HHHhccc
Confidence 9999863
No 107
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=90.48 E-value=1.2 Score=37.86 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=57.0
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhcc-ChHHHHHHHHcCcHHHHHHhhcC------CCHHHHHHHHHHHHHHhcC
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQN-NPLVQKQVLELGALSKLMKMVKS------SFVEEAVKALYTVSSLIRN 246 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqN-Np~~Q~~~le~G~lp~Ll~LL~s------~~~~v~~kAL~ALSsLiR~ 246 (363)
+..|..-|++.++.++..|..+|-++++| .+..+..+.....+..|++++.. .+..|+.|++.-|-+-...
T Consensus 40 ~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~ 117 (148)
T 1mhq_A 40 PWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVW 117 (148)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 34455667899999999999999999999 46788888888999999999974 3568888887766654433
No 108
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=90.16 E-value=3.6 Score=45.35 Aligned_cols=166 Identities=16% Similarity=0.154 Sum_probs=92.5
Q ss_pred cccCCCHHHHH----------HhHHHHHHHHHHcCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhH
Q 017926 101 DVQRLSPSELK----------KRQMEIKELMEKLKTPSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDL 170 (363)
Q Consensus 101 ~~~~~~~e~l~----------~r~~~Lkeal~~l~~~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l 170 (363)
-.+.++.|+|+ +-|.|+.+++-..+.+.-...|++. +.+...+..+...++-.+..++.. +
T Consensus 319 ~lR~~~~e~L~~l~~~~~~~~~~r~~~lDal~~aGT~~a~~~i~~~---i~~~~l~~~ea~~~l~~~~~~~~P-t----- 389 (1056)
T 1lsh_A 319 FLRNVDAGVLQSIWHKLHQQKDYRRWILDAVPAMATSEALLFLKRT---LASEQLTSAEATQIVASTLSNQQA-T----- 389 (1056)
T ss_dssp HHTTSCHHHHHHHHHHHTTSHHHHHHHHHHHHHHCSHHHHHHHHHH---HHTTCSCHHHHHHHHHHHHHTCCC-C-----
T ss_pred HHhcCCHHHHHHHHHHHhccHHHHHHHHHHhHhcCCHHHHHHHHHH---HHcCCCCHHHHHHHHHHhhccCCC-C-----
Confidence 34567776653 1234666666655554344445544 455666766554454444443321 1
Q ss_pred HhcCCHHHHHHhcCC----CCHHHHHHHHHHHHHHhc----cChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHH
Q 017926 171 SKLGGLSVLVGQLNH----PDTDIRKISAWILGKASQ----NNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSS 242 (363)
Q Consensus 171 ~~lGgl~~Li~lL~s----~~~~Ir~~Aa~~Lgt~aq----NNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSs 242 (363)
...+..+..++++ .++.+|..|.-++|+++. +++.|...+++ -....|.+.+.+.+...+..+|.||+|
T Consensus 390 --~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~~c~~~~v~-~i~~~l~~~~~~~~~~~~~~~LkaLGN 466 (1056)
T 1lsh_A 390 --RESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCPDELLQ-PLHDLLSQSSDRAKEEEIVLALKALGN 466 (1056)
T ss_dssp --HHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCSSCCGGGTH-HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCCCCCHHHHH-HHHHHHHHHHhcCChHHHHHHHHHhhc
Confidence 1123444556655 467888888888888774 33333221110 122233344455566678899999999
Q ss_pred HhcCCcccHHHHHhcCcHHHHHHhhcC-----CCccHHHHHHHHHHHHHHhh
Q 017926 243 LIRNNLAGQEMFYVEAGDLMLQDILGN-----SSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 243 LiR~~~~a~~~f~~~gG~~~L~~lL~s-----~~~~~klr~kA~~lL~~L~~ 289 (363)
+ ++|. .++.|..++.. .+...++|..|+++|..+..
T Consensus 467 ~--g~p~---------~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~ 507 (1056)
T 1lsh_A 467 A--GQPN---------SIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAK 507 (1056)
T ss_dssp H--TCGG---------GHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGG
T ss_pred c--CChh---------HHHHHHHhhcCccccccccchHHHHHHHHHHHHhhh
Confidence 8 4553 45555555532 12346777778888777763
No 109
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=89.46 E-value=0.96 Score=37.98 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=54.0
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHH
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNN-PLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSL 243 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsL 243 (363)
+..|..-|++.++.++.+|..+|-++++|. +..+..+.....+..|+++++..++.|+.|.+..|-+-
T Consensus 44 ~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~~~~Vk~kil~li~~W 112 (140)
T 3ldz_A 44 LRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEW 112 (140)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 344556678889999999999999999995 56777777777888888988777788888887766554
No 110
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=89.34 E-value=1.2 Score=49.17 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=63.0
Q ss_pred CCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCC---CH--HHHHHHHHHHHHHhcCCcccHHHHHhcCcH
Q 017926 186 PDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSS---FV--EEAVKALYTVSSLIRNNLAGQEMFYVEAGD 260 (363)
Q Consensus 186 ~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~---~~--~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~ 260 (363)
.+=..++.++|++|.++..-..-+..-.=..++|.|+.++... ++ -++..++|.||...+-... ...|. ..-+
T Consensus 465 ~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~wl~~-~~~~L-~~vl 542 (1023)
T 4hat_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKA-HWNFL-RTVI 542 (1023)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHHHHH-CHHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHhc-cHHHH-HHHH
Confidence 5678999999999999975433323222235788888888631 12 2345677998875542111 11121 1234
Q ss_pred HHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 261 LMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 261 ~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
..|...+..+ +.+++..|++++.+||.
T Consensus 543 ~~L~~~l~~~--~~~v~~~A~~al~~l~~ 569 (1023)
T 4hat_C 543 LKLFEFMHET--HEGVQDMACDTFIKIVQ 569 (1023)
T ss_dssp HHHHHHTTCS--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcC--CHHHHHHHHHHHHHHHH
Confidence 4566666554 46799999999999996
No 111
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=88.43 E-value=1.1 Score=38.13 Aligned_cols=112 Identities=11% Similarity=0.032 Sum_probs=78.0
Q ss_pred HHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHh
Q 017926 236 ALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDL 315 (363)
Q Consensus 236 AL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~l 315 (363)
.+-.|+-+|+..+.+. ...+..|..-|++. +..++..|+.++-.++. |.+..+...+.+..++..|+.+
T Consensus 21 ~~leicD~I~~~~~~~-----k~a~rai~krl~~~--n~~vql~AL~LLe~~vk----NCG~~fh~evas~~Fl~eL~kl 89 (148)
T 1mhq_A 21 AIQNFCEQVNTDPNGP-----THAPWLLAHKIQSP--QEKEALYALTVLEMCMN----HCGEKFHSEVAKFRFLNELIKV 89 (148)
T ss_dssp HHHHHHHHHHHSSHHH-----HHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHH----HSCHHHHHHHTSHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCccH-----HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHH----HcCHHHHHHHhhHHHHHHHHHH
Confidence 3446777777654322 23456677777776 67789999999999987 4677777888888999999999
Q ss_pred ccC------CChhHHHHHHHHHHhhcccccCchhhhhHHHHHHhhhhccc
Q 017926 316 TAS------ADLDLQEKVFLEHVFCGLVFCTCPCIVRGAVIVAEYIYINF 359 (363)
Q Consensus 316 L~~------~d~~lqE~al~aL~~~~~~~~~~~~~~r~~~l~~~~~~~~~ 359 (363)
+.. .+..++++++..+..++...+..+. ++..--.....|+.|
T Consensus 90 ~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~~p~-i~~~y~~Lk~~G~~F 138 (148)
T 1mhq_A 90 LSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIK-IRDAYQMLKKQGIIK 138 (148)
T ss_dssp TCCSTTSCCCCHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHTTSSC
T ss_pred HccccCCCCCCHHHHHHHHHHHHHHHHHcCCCch-HHHHHHHHHHcCCCC
Confidence 874 4889999999999877765554453 443333344444444
No 112
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=88.39 E-value=1.5 Score=38.21 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=57.7
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHhhcC------CCHHHHHHHHHHHHHHhcCC
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNN-PLVQKQVLELGALSKLMKMVKS------SFVEEAVKALYTVSSLIRNN 247 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp~Ll~LL~s------~~~~v~~kAL~ALSsLiR~~ 247 (363)
+..|..-|++.++.++.+|..+|-++++|. +..+..+.+...+..|++++.. .+..|+.|++..|-.-...+
T Consensus 52 ~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f 130 (171)
T 1juq_A 52 VRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL 130 (171)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 345667778999999999999999999995 6788888888999999999973 24678888887777654433
No 113
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=88.16 E-value=1.8 Score=36.31 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=70.4
Q ss_pred HHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHH
Q 017926 235 KALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVD 314 (363)
Q Consensus 235 kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~ 314 (363)
..+-.|+-+|+..+.+.. ..+..|..-|.+. +..++..|+.++-.++. |.++.+...+.+..++..++.
T Consensus 24 ~~ileicD~I~~~~~~~k-----~a~rai~Krl~~~--n~~~ql~AL~LLe~~vk----NcG~~f~~evas~~Fl~el~~ 92 (140)
T 3ldz_A 24 GLILDICDKVGQSRTGPK-----DCLRSIMRRVNHK--DPHVAMQALTLLGACVS----NCGKIFHLEVCSRDFASEVSN 92 (140)
T ss_dssp HHHHHHHHHHTTSTTHHH-----HHHHHHHHHHTCS--SHHHHHHHHHHHHHHHH----HSCHHHHHHHSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcCHH-----HHHHHHHHHHcCC--ChHHHHHHHHHHHHHHH----hcCHHHHHHHhhHHHHHHHHH
Confidence 356668888887654322 3456677777776 56788999999988886 356666666767788888888
Q ss_pred hccCCChhHHHHHHHHHHhhcccccCch
Q 017926 315 LTASADLDLQEKVFLEHVFCGLVFCTCP 342 (363)
Q Consensus 315 lL~~~d~~lqE~al~aL~~~~~~~~~~~ 342 (363)
+++..++.++++++..+..++......+
T Consensus 93 l~~~~~~~Vk~kil~li~~W~~~f~~~~ 120 (140)
T 3ldz_A 93 VLNKGHPKVCEKLKALMVEWTDEFKNDP 120 (140)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHTTCG
T ss_pred HhccCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 8877899999999999986665444444
No 114
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=88.07 E-value=1.8 Score=37.31 Aligned_cols=95 Identities=15% Similarity=0.068 Sum_probs=69.1
Q ss_pred HHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHh
Q 017926 236 ALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDL 315 (363)
Q Consensus 236 AL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~l 315 (363)
.+-.|+-+|+..+.+.. ..+..|..-|++. +..++..|+.+|-.++. +....+...+.+..++..|+.+
T Consensus 35 ~~leicD~I~~~~~~~k-----eA~ral~krl~~~--n~~vql~AL~LLd~~vk----NcG~~Fh~evas~~Fl~el~~l 103 (163)
T 1x5b_A 35 LIMDICDKVGSTPNGAK-----DCLKAIMKRVNHK--VPHVALQALTLLGACVA----NCGKIFHLEVCSRDFATEVRAV 103 (163)
T ss_dssp HHHHHHHHHHHSSSHHH-----HHHHHHHHHHTCS--SHHHHHHHHHHHHHHHH----HTCHHHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCccHH-----HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHH----HhhHHHHHHHhhHHHHHHHHHH
Confidence 44567778876554322 2345677777776 56788999999998887 3566777777778888889888
Q ss_pred ccC-CChhHHHHHHHHHHhhcccccCc
Q 017926 316 TAS-ADLDLQEKVFLEHVFCGLVFCTC 341 (363)
Q Consensus 316 L~~-~d~~lqE~al~aL~~~~~~~~~~ 341 (363)
+.. .++.++++++..+..++......
T Consensus 104 ~~~~~~~~Vk~kil~li~~W~~~f~~~ 130 (163)
T 1x5b_A 104 IKNKAHPKVCEKLKSLMVEWSEEFQKD 130 (163)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTTTC
T ss_pred HccCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 876 58999999999988766544433
No 115
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=87.59 E-value=1.5 Score=38.04 Aligned_cols=130 Identities=12% Similarity=0.066 Sum_probs=85.7
Q ss_pred HHHHHHhhcCCC-HHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCC
Q 017926 218 LSKLMKMVKSSF-VEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMH 296 (363)
Q Consensus 218 lp~Ll~LL~s~~-~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~ 296 (363)
+..+|.-..++. .+.--..+-.|+-+|+..+.+.. ..+..|..-|++. +..++..|+.++-.++. |..
T Consensus 14 ~~~~IekATs~~l~~~Dw~~ileicD~I~~~~~~~k-----~A~ral~krl~~~--n~~vql~AL~LLd~~vk----NCG 82 (171)
T 1juq_A 14 LESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQ-----IAVRLLAHKIQSP--QEWEALQALTVLEACMK----NCG 82 (171)
T ss_dssp HHHHHHHHTCTTCSSCCHHHHHHHHHHHHHSTTHHH-----HHHHHHHHHHTCS--SHHHHHHHHHHHHHHHH----HSH
T ss_pred HHHHHHHHcCCCCCCcCHHHHHHHHHHHHcCCccHH-----HHHHHHHHHhcCC--CHHHHHHHHHHHHHHHH----HcC
Confidence 445555444432 11122345578888887654322 2355677778876 56789999999999987 355
Q ss_pred CCcchhHHhCCcHHHHHHhccC------CChhHHHHHHHHHHhhcccccCchhhhhHHHHHHhhhhccc
Q 017926 297 KVEPPLFRDRFFLKSVVDLTAS------ADLDLQEKVFLEHVFCGLVFCTCPCIVRGAVIVAEYIYINF 359 (363)
Q Consensus 297 ~~~~~~l~~~g~v~~Lv~lL~~------~d~~lqE~al~aL~~~~~~~~~~~~~~r~~~l~~~~~~~~~ 359 (363)
..+...+.+..++..|+.++.. .+..++++++..+..++...+..+ .++..--.....|+.|
T Consensus 83 ~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~~~-~i~~~y~~Lk~~G~~f 150 (171)
T 1juq_A 83 RRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPEEA-KIKDAYHMLKRQGIVQ 150 (171)
T ss_dssp HHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHCTTCH-HHHHHHHHHHHTTSCS
T ss_pred HHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHCCCCC
Confidence 6677777788899999999863 378999999999997776555444 3444433444445444
No 116
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=86.92 E-value=4.2 Score=34.47 Aligned_cols=72 Identities=15% Similarity=0.091 Sum_probs=56.5
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHhhcC------CCHHHHHHHHHHHHHHhcCC
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNN-PLVQKQVLELGALSKLMKMVKS------SFVEEAVKALYTVSSLIRNN 247 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp~Ll~LL~s------~~~~v~~kAL~ALSsLiR~~ 247 (363)
+..|..-|++.++.++..|..+|-++++|. +..+..|.....+..|++++.. .+..|+.|.+..|-+-...+
T Consensus 50 ~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f 128 (149)
T 3g2s_A 50 TRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGL 128 (149)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHHHh
Confidence 334556678899999999999999999996 4567778788899999999974 45678888887777655443
No 117
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=85.35 E-value=5.3 Score=38.08 Aligned_cols=105 Identities=15% Similarity=0.100 Sum_probs=66.4
Q ss_pred cHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcC-c-H----HHHHHhhcCCC-ccHHHHHHHHHHHHHHhh
Q 017926 217 ALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEA-G-D----LMLQDILGNSS-FEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 217 ~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~g-G-~----~~L~~lL~s~~-~~~klr~kA~~lL~~L~~ 289 (363)
.+..|+ +....+..++.+|...|++.+||||++.+.+.+.- . + +-|..++...+ ....++.+-+..|.-|+.
T Consensus 72 lL~nL~-~~~~~~~~~rE~aarII~ssLRNNP~Al~~V~~~~p~fv~~lf~~L~~~~~~~~~~~~~l~KR~LsII~~L~~ 150 (315)
T 3qml_C 72 LLANLS-LNENLPLTLRELSTRVITSCLRNNPPVVEFINESFPNFKSKIMAALSNLNDSNHRSSNILIKRYLSILNELPV 150 (315)
T ss_dssp HHHHHH-HCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHCTTHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHH-hhccCChhHHHHHHHHHHHHHccCHHHHHHHHHhChhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHhc
Confidence 333444 33344567899999999999999999998777632 1 2 22333333221 133577778888888874
Q ss_pred hhhhcCCCCcchhHHhCCcHHHHHHhccCC--ChhHHHHHHHHHH
Q 017926 290 CQLENMHKVEPPLFRDRFFLKSVVDLTASA--DLDLQEKVFLEHV 332 (363)
Q Consensus 290 ~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~--d~~lqE~al~aL~ 332 (363)
++ ..|. ...+..|.+++... +.+.|.+++.-+.
T Consensus 151 ------~~---~~F~-~~~m~~L~~ly~~~~~d~~~k~Kvl~li~ 185 (315)
T 3qml_C 151 ------TS---EDLP-IYSTVVLQNVYERNNKDKQLQIKVLELIS 185 (315)
T ss_dssp ------CS---TTC---CCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred ------Ch---Hhhh-hccHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 22 2222 33447777777666 8999999887765
No 118
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=84.90 E-value=24 Score=39.10 Aligned_cols=107 Identities=13% Similarity=0.081 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhccC--
Q 017926 129 DAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQNN-- 205 (363)
Q Consensus 129 d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNN-- 205 (363)
|.+.+.+++..+-++ +.+.|..|-+.|..+-++. ++|..+..+|. +.++.+|..|+.+|-+..+.+
T Consensus 26 Dv~~Le~lv~~ly~p--~~~~r~qA~~~L~q~q~sp---------~aw~~~~~iL~~s~~~~vR~fAa~~L~~~I~~~W~ 94 (1073)
T 3gjx_A 26 DINLLDNVVNCLYHG--EGAQQRMAQEVLTHLKEHP---------DAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWK 94 (1073)
T ss_dssp SHHHHHHHHHTTTCS--SHHHHHHHHHHHHTSSCCS---------CHHHHHTCC---CCSHHHHHHHHHHHHHHHHHTGG
T ss_pred CHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHcCc---------hHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 566677777776655 3567888888777765544 36777777775 458899999999999988742
Q ss_pred --hHHHHHHHHcCcHHHHHHhhcCC-----CHHHHHHHHHHHHHHhcC
Q 017926 206 --PLVQKQVLELGALSKLMKMVKSS-----FVEEAVKALYTVSSLIRN 246 (363)
Q Consensus 206 --p~~Q~~~le~G~lp~Ll~LL~s~-----~~~v~~kAL~ALSsLiR~ 246 (363)
|.-+...++...+..+.+.-.++ ++.++.|...+++.+++.
T Consensus 95 ~L~~e~~~~LR~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~ 142 (1073)
T 3gjx_A 95 ILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQ 142 (1073)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHccCccccccchHHHHHHHHHHHHHHHH
Confidence 44555566666666666654432 355667777788877765
No 119
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=84.80 E-value=4.6 Score=37.58 Aligned_cols=131 Identities=14% Similarity=0.112 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHcccCC---Cc-hhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHH
Q 017926 146 SLEDSQRALQELLILVEPI---DN-ANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKL 221 (363)
Q Consensus 146 s~e~k~~AL~~L~~Lve~i---Dn-An~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~L 221 (363)
+...-..+|+.|..+++-. +. -.+-...--+|.|+.-|.++...+|..+-.++..+.+--|. ...++.+
T Consensus 100 N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~-------~~v~~~l 172 (266)
T 2of3_A 100 NPAALIKVLELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGP-------LKMTPML 172 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH-------HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCH-------HHHHHHH
Confidence 4444455566555554321 10 11111122468888888888899999999998877653221 2356778
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcH---HHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 222 MKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGD---LMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 222 l~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~---~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
+.-+++.+..+|..++..|++++..+... ...++ +.+..++.++ |..+|.-|..++..+...
T Consensus 173 ~~g~ksKN~R~R~e~l~~l~~li~~~G~~-----~~~~l~~~~~ia~ll~D~--d~~VR~aAl~~lve~y~~ 237 (266)
T 2of3_A 173 LDALKSKNARQRSECLLVIEYYITNAGIS-----PLKSLSVEKTVAPFVGDK--DVNVRNAAINVLVACFKF 237 (266)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHHHHHCSG-----GGGGGCHHHHHGGGGGCS--SHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHhcCCC-----ccccccchHHHHHHHcCC--CHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999865443 23578 8999999987 677999999998887754
No 120
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=84.63 E-value=3.5 Score=35.19 Aligned_cols=67 Identities=10% Similarity=0.036 Sum_probs=52.9
Q ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHH-HHHhhcC---CCHHHHHHHHHHHHHH
Q 017926 177 SVLVGQLN-HPDTDIRKISAWILGKASQNN-PLVQKQVLELGALSK-LMKMVKS---SFVEEAVKALYTVSSL 243 (363)
Q Consensus 177 ~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp~-Ll~LL~s---~~~~v~~kAL~ALSsL 243 (363)
..|..-|+ +.++.++..|..+|-++++|. +..+..+.+...+.. |++++.. .+..|+.|++..|-.-
T Consensus 56 ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W 128 (157)
T 1elk_A 56 RAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSW 128 (157)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHH
Confidence 44556676 578999999999999999996 888888888889998 8999853 2357888877666553
No 121
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=84.58 E-value=11 Score=40.02 Aligned_cols=143 Identities=12% Similarity=0.021 Sum_probs=88.9
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhccC----
Q 017926 131 QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQNN---- 205 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNN---- 205 (363)
..+.+++..+..+ .+.+.|..|-+.|..+-.+. ++|..+..+|. +.++.+|..|+.+|-+..+.+
T Consensus 24 ~~l~~~l~~l~~~-~~~~~r~~A~~~L~~~~~~p---------~~~~~~~~lL~~~~~~~vr~~aa~~L~~~i~~~w~~l 93 (963)
T 2x19_B 24 ENVEKALHQLYYD-PNIENKNLAQKWLMQAQVSP---------QAWHFSWQLLQPDKVPEIQYFGASALHIKISRYWSDI 93 (963)
T ss_dssp HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHST---------THHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHCGGGS
T ss_pred HHHHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCH---------HHHHHHHHHhcCCCchHHHHHHHHHHHHHHHhCHHhC
Confidence 3344555553322 24566766766666543332 57888888885 568999999999999988643
Q ss_pred hHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcC-CcccHHHHHhcCcHHHHHHhhcCC---CccHHHHHHHH
Q 017926 206 PLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRN-NLAGQEMFYVEAGDLMLQDILGNS---SFEIRLHRKAV 281 (363)
Q Consensus 206 p~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~-~~~a~~~f~~~gG~~~L~~lL~s~---~~~~klr~kA~ 281 (363)
|.-+...++...+..+.+. .+++..++.|...+|+.|++. +|.... +-++-|+.++++. ..+...+.-+.
T Consensus 94 ~~~~~~~ir~~ll~~l~~~-~~~~~~ir~kl~~~la~i~~~~~p~~Wp-----~~l~~l~~~~~~~~~~~~~~~~~~~~l 167 (963)
T 2x19_B 94 PTDQYESLKAQLFTQITRF-ASGSKIVLTRLCVALASLALSMMPDAWP-----CAVADMVRLFQAEDSPVDGQGRCLALL 167 (963)
T ss_dssp CGGGHHHHHHHHHHHHHHT-TTSCHHHHHHHHHHHHHHHHHHTTTTST-----THHHHHHHHHCC------CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHhCccccc-----hHHHHHHHHHhhhccCCCcHHHHHHHH
Confidence 3334444555566666553 223577899999999999886 343322 3455666666651 01233455667
Q ss_pred HHHHHHhh
Q 017926 282 SLVGDLAK 289 (363)
Q Consensus 282 ~lL~~L~~ 289 (363)
.++..|+.
T Consensus 168 ~iL~~l~e 175 (963)
T 2x19_B 168 ELLTVLPE 175 (963)
T ss_dssp HHHHHHHH
T ss_pred HHHHhCHH
Confidence 77777764
No 122
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=84.42 E-value=6.9 Score=42.62 Aligned_cols=101 Identities=13% Similarity=0.065 Sum_probs=60.0
Q ss_pred CCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCC----CH-HHHHHHHHHHHHHhcCCcccHHHHHhcCcH
Q 017926 186 PDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSS----FV-EEAVKALYTVSSLIRNNLAGQEMFYVEAGD 260 (363)
Q Consensus 186 ~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~----~~-~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~ 260 (363)
.+-..+..|++++|.++.......+.-+-...++.|+.+.... +. -++..++|.++...+-.... ..+.. .-+
T Consensus 465 ~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~l~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~-~~~l~-~vl 542 (1049)
T 3m1i_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAH-WNFLR-TVI 542 (1049)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHCHHHHHHC-HHHHH-HHH
T ss_pred CCHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhH-HHHHH-HHH
Confidence 4667899999999999865433322111112444444443321 12 23446888888654422111 12221 345
Q ss_pred HHHHHhhcCCCccHHHHHHHHHHHHHHhhh
Q 017926 261 LMLQDILGNSSFEIRLHRKAVSLVGDLAKC 290 (363)
Q Consensus 261 ~~L~~lL~s~~~~~klr~kA~~lL~~L~~~ 290 (363)
+.|...|.++ +.+++..|++++..|+..
T Consensus 543 ~~ll~~l~~~--~~~V~~~A~~al~~l~~~ 570 (1049)
T 3m1i_C 543 LKLFEFMHET--HEGVQDMACDTFIKIVQK 570 (1049)
T ss_dssp HHHHHHTTSS--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--CHHHHHHHHHHHHHHHHH
Confidence 6677777765 578999999999999963
No 123
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=84.34 E-value=0.36 Score=44.44 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=16.5
Q ss_pred HHHHHhcCCCCHHHHHHHHHHH
Q 017926 177 SVLVGQLNHPDTDIRKISAWIL 198 (363)
Q Consensus 177 ~~Li~lL~s~~~~Ir~~Aa~~L 198 (363)
..+..+++++++.||..|+..+
T Consensus 77 ~~l~~L~~D~~~~VR~~aA~~L 98 (244)
T 1lrv_A 77 EALTPLIRDSDEVVRRAVAYRL 98 (244)
T ss_dssp GGGGGGTTCSSHHHHHHHHTTS
T ss_pred HHHHHHccCcCHHHHHHHHHHC
Confidence 3455677888999999888643
No 124
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=84.04 E-value=0.38 Score=44.26 Aligned_cols=21 Identities=19% Similarity=0.102 Sum_probs=16.0
Q ss_pred HHHHHhcCCCCHHHHHHHHHH
Q 017926 177 SVLVGQLNHPDTDIRKISAWI 197 (363)
Q Consensus 177 ~~Li~lL~s~~~~Ir~~Aa~~ 197 (363)
+.|..++++++..||..++.-
T Consensus 101 ~~L~~ll~D~d~~VR~~aA~~ 121 (244)
T 1lrv_A 101 EQLSALMFDEDREVRITVADR 121 (244)
T ss_dssp GGGGGTTTCSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHh
Confidence 456677888888888888774
No 125
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=82.39 E-value=3.8 Score=36.73 Aligned_cols=69 Identities=16% Similarity=0.191 Sum_probs=53.9
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHHHHHhhcCC-CHHHHHHHHHHHHHHh
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNN-PLVQKQVLELGALSKLMKMVKSS-FVEEAVKALYTVSSLI 244 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp~Ll~LL~s~-~~~v~~kAL~ALSsLi 244 (363)
+..|..-|++.++.++.+|..+|-++++|. +..+..|.+...+..|++++.+. +..|+.|++.-+-.-.
T Consensus 44 ~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 114 (220)
T 1dvp_A 44 FAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWA 114 (220)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 334556678899999999999999999996 56778887778899999988753 4678887776655443
No 126
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=81.87 E-value=3.4 Score=37.38 Aligned_cols=70 Identities=14% Similarity=0.216 Sum_probs=54.6
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccCh-HHHHHHHHcCcHHHHHHhhcC-CCHHHHHHHHHHHHHHhc
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNNP-LVQKQVLELGALSKLMKMVKS-SFVEEAVKALYTVSSLIR 245 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp-~~Q~~~le~G~lp~Ll~LL~s-~~~~v~~kAL~ALSsLiR 245 (363)
+..|..-|++.++.++.+|..+|-++++|.. ..+..|.....+..|+++++. .+..|+.|++..|-.-..
T Consensus 47 ~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~ 118 (226)
T 3zyq_A 47 VNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAH 118 (226)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 3445666789999999999999999999944 477777777888888888865 346788888877766543
No 127
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=81.69 E-value=8.1 Score=32.70 Aligned_cols=114 Identities=9% Similarity=0.059 Sum_probs=79.4
Q ss_pred HHHHHHhhcCCCH-HHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCC
Q 017926 218 LSKLMKMVKSSFV-EEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMH 296 (363)
Q Consensus 218 lp~Ll~LL~s~~~-~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~ 296 (363)
+..++.-..++.- +.--..+-.|+-+|+..+.+-. ..+..|..-+.+. ++.++..|+.++-.++. |..
T Consensus 12 ~~~~IekATs~~l~~~dw~~ileicD~I~~~~~~pk-----~a~ral~krl~~~--n~~v~l~AL~LLe~cvk----NCG 80 (149)
T 3g2s_A 12 LEARINRATNPLNKELDWASINGFCEQLNEDFEGPP-----LATRLLAHKIQSP--QEWEAIQALTVLETCMK----SCG 80 (149)
T ss_dssp HHHHHHHHSCTTCSSCCHHHHHHHHHHGGGSSSHHH-----HHHHHHHHHHTCS--SHHHHHHHHHHHHHHHH----HCC
T ss_pred HHHHHHHHcCCCCCCcCHHHHHHHHHHHHCCCCcHH-----HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHH----hcC
Confidence 4445554444321 1123466778888887654322 2455777777776 67789999999999987 467
Q ss_pred CCcchhHHhCCcHHHHHHhccC------CChhHHHHHHHHHHhhcccccCch
Q 017926 297 KVEPPLFRDRFFLKSVVDLTAS------ADLDLQEKVFLEHVFCGLVFCTCP 342 (363)
Q Consensus 297 ~~~~~~l~~~g~v~~Lv~lL~~------~d~~lqE~al~aL~~~~~~~~~~~ 342 (363)
..+...+.+..++..|+.++.. .+..++++++..+..++...+..+
T Consensus 81 ~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~~~p 132 (149)
T 3g2s_A 81 KRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPEEV 132 (149)
T ss_dssp HHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHHHhCCCc
Confidence 7777778888899999999963 588999999999987776444444
No 128
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=81.68 E-value=15 Score=40.03 Aligned_cols=146 Identities=10% Similarity=0.036 Sum_probs=92.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhcc
Q 017926 126 TPSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQN 204 (363)
Q Consensus 126 ~~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqN 204 (363)
.|.+.+.+.+++..+-+++ .+.|..|-+.|..+-.+. ++|..+..+|. +.++.+|..|+.+|-+....
T Consensus 11 ~~~~~~~l~~~l~~~~~p~--~~~r~~Ae~~L~~~~~~p---------~~~~~l~~iL~~s~~~~vr~~aa~~Lk~~i~~ 79 (1049)
T 3m1i_C 11 NDLDIALLDQVVSTFYQGS--GVQQKQAQEILTKFQDNP---------DAWQKADQILQFSTNPQSKFIALSILDKLITR 79 (1049)
T ss_dssp SCCCHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHST---------TGGGGHHHHHHHCSCHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHhCc---------hHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHh
Confidence 4445666667777666654 346777777776654433 46777777773 57899999999999998864
Q ss_pred C----hHHHHHHHHcCcHHHHHHhhcCC-----CHHHHHHHHHHHHHHhcC-CcccHHHHHhcCcHHHHHHhhcCCCccH
Q 017926 205 N----PLVQKQVLELGALSKLMKMVKSS-----FVEEAVKALYTVSSLIRN-NLAGQEMFYVEAGDLMLQDILGNSSFEI 274 (363)
Q Consensus 205 N----p~~Q~~~le~G~lp~Ll~LL~s~-----~~~v~~kAL~ALSsLiR~-~~~a~~~f~~~gG~~~L~~lL~s~~~~~ 274 (363)
+ |.-+...++...+..+...-..+ +..++.|...+|+.|++. .|.... +-++-|+.+++. +.
T Consensus 80 ~W~~l~~~~~~~ir~~ll~~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~~Wp-----~ll~~L~~~~~~---~~ 151 (1049)
T 3m1i_C 80 KWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWP-----EFIPELIGSSSS---SV 151 (1049)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCT-----THHHHHHHHHTT---CH
T ss_pred hCccCCHHHHHHHHHHHHHHHHhhCCccccchhhHHHHHHHHHHHHHHHHHhCcccch-----HHHHHHHHHHcc---Ch
Confidence 2 33344445555555555443222 256788999999999886 443222 345566666653 23
Q ss_pred HHHHHHHHHHHHHhhh
Q 017926 275 RLHRKAVSLVGDLAKC 290 (363)
Q Consensus 275 klr~kA~~lL~~L~~~ 290 (363)
..+..+..++..|+.+
T Consensus 152 ~~~~~~l~~L~~l~ee 167 (1049)
T 3m1i_C 152 NVCENNMIVLKLLSEE 167 (1049)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3455667777777643
No 129
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=81.21 E-value=20 Score=39.37 Aligned_cols=110 Identities=12% Similarity=0.084 Sum_probs=78.3
Q ss_pred CCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhcc
Q 017926 126 TPSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQN 204 (363)
Q Consensus 126 ~~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqN 204 (363)
.|-|.+.+.+++..+-++. .+.|..|-+.|.++=.+. ++|..+..+|. +.++.+|..|+.+|-+..+.
T Consensus 11 ~~~dv~~Le~av~~ly~p~--~~~r~~A~~~L~~~q~sp---------~aw~~~~~iL~~s~~~~vR~faa~~Lk~~I~~ 79 (1023)
T 4hat_C 11 NDLDIALLDQVVSTFYQGS--GVQQKQAQEILTKFQDNP---------DAWQKADQILQFSTNPQSKFIALSILDKLITR 79 (1023)
T ss_dssp SCCCHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHCT---------TGGGGHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHcCc---------cHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 3445666777777776654 246777777777654443 46777777774 56899999999999999874
Q ss_pred ----ChHHHHHHHHcCcHHHHHHhhcCC-----CHHHHHHHHHHHHHHhcC
Q 017926 205 ----NPLVQKQVLELGALSKLMKMVKSS-----FVEEAVKALYTVSSLIRN 246 (363)
Q Consensus 205 ----Np~~Q~~~le~G~lp~Ll~LL~s~-----~~~v~~kAL~ALSsLiR~ 246 (363)
-|.-+...++...+..+.+...++ ...++.|...+++.+++.
T Consensus 80 ~W~~L~~e~~~~Ir~~Ll~~l~~~~~~~~~i~~~~~i~nKLa~~la~I~~~ 130 (1023)
T 4hat_C 80 KWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQ 130 (1023)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHhcCCcccccccHHHHHHHHHHHHHHHHH
Confidence 355566667777777777765443 345678899999998876
No 130
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=79.41 E-value=21 Score=33.59 Aligned_cols=148 Identities=13% Similarity=0.031 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhc--CCHHHHHHhcCCCCHHHHHHHHHHHHHHhcc---
Q 017926 130 AQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKL--GGLSVLVGQLNHPDTDIRKISAWILGKASQN--- 204 (363)
Q Consensus 130 ~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~l--Ggl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqN--- 204 (363)
..++...+..+.+ ...+-.++.++.-+..+........-+... ..+..+..++.+++..+|..++.++-+.+--
T Consensus 146 ~~l~~~l~~~~~~-~~~p~n~ml~lR~l~NlF~~~~g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~ 224 (304)
T 3ebb_A 146 AQFSSHLINLLNP-KGKPANQLLALRTFCNCFVGQAGQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVCFHK 224 (304)
T ss_dssp HHHHHHHHHTTCT-TSCHHHHHHHHHHHHHGGGSHHHHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcCC-CCChHHHHHHHHHHHHccCCchhHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhh
Confidence 3444444454433 345667888888888888776544433331 1223334455567999999999988877642
Q ss_pred ChHHHHHHHHcCcHHHHHHhhcC-CCHHHHHHHHHHHHHHhcCCcccHHHHHh-cCcHHHHHHhhcCCCccHHHHHHHHH
Q 017926 205 NPLVQKQVLELGALSKLMKMVKS-SFVEEAVKALYTVSSLIRNNLAGQEMFYV-EAGDLMLQDILGNSSFEIRLHRKAVS 282 (363)
Q Consensus 205 Np~~Q~~~le~G~lp~Ll~LL~s-~~~~v~~kAL~ALSsLiR~~~~a~~~f~~-~gG~~~L~~lL~s~~~~~klr~kA~~ 282 (363)
++.. +. ...++..+.+++.. .+.+...+++-||++++..... ...+.+ .|.-..+..+.+.. .+.|+..-+.+
T Consensus 225 ~~~~-~~--~~~ll~~l~~il~~~~d~EalyR~LvALGtL~~~~~~-~~~lak~l~~~~~v~~~~~~~-~~~kv~~~~~~ 299 (304)
T 3ebb_A 225 DHNI-EG--KAQCLSLISTILEVVQDLEATFRLLVALGTLISDDSN-AVQLAKSLGVDSQIKKYSSVS-EPAKVSECCRF 299 (304)
T ss_dssp SCCH-HH--HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTHHHHGGGGGGCC-SSHHHHHHHHH
T ss_pred cCCc-hH--HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhCChh-HHHHHHHcCHHHHHHHHHhCC-CchhHHHHHHH
Confidence 1111 11 11255566666665 3567788999999999987544 444444 44445555555553 36676554444
Q ss_pred H
Q 017926 283 L 283 (363)
Q Consensus 283 l 283 (363)
+
T Consensus 300 ~ 300 (304)
T 3ebb_A 300 I 300 (304)
T ss_dssp H
T ss_pred H
Confidence 3
No 131
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=79.26 E-value=38 Score=34.22 Aligned_cols=145 Identities=12% Similarity=0.135 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHcccCC-CchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh
Q 017926 147 LEDSQRALQELLILVEPI-DNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV 225 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lve~i-DnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL 225 (363)
...|.-|.+.+-.+...- +.++. .+..+++|+..++..||.+|..-|..+|.+ ..+. .....|++||
T Consensus 42 ~k~K~LaaQ~I~kffk~FP~l~~~-----Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~i~------kiaDvL~QlL 109 (507)
T 3u0r_A 42 TKEKRLAAQFIPKFFKHFPELADS-----AINAQLDLCEDEDVSIRRQAIKELPQFATG-ENLP------RVADILTQLL 109 (507)
T ss_dssp HHHHHHHHHHHHHHGGGCGGGHHH-----HHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhChhhHHH-----HHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hhhh------hHHHHHHHHH
Confidence 445555555555443321 22221 345556666677889999999999999986 2221 2457789999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh
Q 017926 226 KSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD 305 (363)
Q Consensus 226 ~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~ 305 (363)
.+++.....-.=.+|-++++.++.+. .+| ++.++..+ +..+|.++..+|..=... ..++....-.+
T Consensus 110 qtdd~~E~~~V~~sL~sllk~Dpk~t-----l~~--lf~~i~~~---~e~~Rer~lkFi~~kl~~----l~~~~l~~E~E 175 (507)
T 3u0r_A 110 QTDDSAEFNLVNNALLSIFKMDAKGT-----LGG--LFSQILQG---EDIVRERAIKFLSTKLKT----LPDEVLTKEVE 175 (507)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHCHHHH-----HHH--HHHHHHHS---CHHHHHHHHHHHHHHGGG----SCTTTSCHHHH
T ss_pred hccchHHHHHHHHHHHHHHhcChHHH-----HHH--HHHHHccc---chHHHHHHHHHHHHHHhh----cchhhccHHHH
Confidence 99887766667777888888776532 111 23333333 356899988888765542 12222223334
Q ss_pred CCcHHHHHHhcc
Q 017926 306 RFFLKSVVDLTA 317 (363)
Q Consensus 306 ~g~v~~Lv~lL~ 317 (363)
.-++..+-.+|+
T Consensus 176 ~~i~~~ikK~L~ 187 (507)
T 3u0r_A 176 ELILTESKKVLE 187 (507)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 444555555553
No 132
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=78.62 E-value=5.1 Score=36.17 Aligned_cols=115 Identities=11% Similarity=0.187 Sum_probs=76.1
Q ss_pred cHHHHHHhhcCCC-HHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcC
Q 017926 217 ALSKLMKMVKSSF-VEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENM 295 (363)
Q Consensus 217 ~lp~Ll~LL~s~~-~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~ 295 (363)
.+..+|.-..++. .+.--..+..|+-+|+..+.+.. ..+..|..-|++. +..++..|+.+|-.++.+ .
T Consensus 8 ~~~~~i~kAT~~~~~~~dw~~ileicD~I~~~~~~~k-----~a~ral~krl~~~--n~~v~l~aL~LLe~~vkN----c 76 (226)
T 3zyq_A 8 TFERLLDKATSQLLLETDWESILQICDLIRQGDTQAK-----YAVNSIKKKVNDK--NPHVALYALEVMESVVKN----C 76 (226)
T ss_dssp HHHHHHHHHTCTTCSSCCHHHHHHHHHHHHTTSSCHH-----HHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHH----H
T ss_pred hHHHHHHHHcCCCCCCcCHHHHHHHHHHHhCCCccHH-----HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHh----c
Confidence 3445555555432 11123456667777876544322 2355677777776 567899999999999873 4
Q ss_pred CCCcchhHHhCCcHHHHHHhccC-CChhHHHHHHHHHHhhcccccCch
Q 017926 296 HKVEPPLFRDRFFLKSVVDLTAS-ADLDLQEKVFLEHVFCGLVFCTCP 342 (363)
Q Consensus 296 ~~~~~~~l~~~g~v~~Lv~lL~~-~d~~lqE~al~aL~~~~~~~~~~~ 342 (363)
...+...+.+..++..|+.++.. .+..++++++..+..++......+
T Consensus 77 G~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~f~~~~ 124 (226)
T 3zyq_A 77 GQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNEP 124 (226)
T ss_dssp CHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTCG
T ss_pred chHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCCCc
Confidence 55566667777787888888765 488999999999887665444444
No 133
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=77.63 E-value=7.5 Score=41.63 Aligned_cols=143 Identities=8% Similarity=-0.002 Sum_probs=84.5
Q ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcC-CCCHHHHHHHHHHHHHHhccC----
Q 017926 131 QLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLN-HPDTDIRKISAWILGKASQNN---- 205 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNN---- 205 (363)
+.+.+++..+.++ +.+.|..|-+.|..+-.+. ++|..+..+|. +.++.+|..|+.+|-+..+.+
T Consensus 7 ~~l~~~l~~~~~~--d~~~r~~A~~~L~~~~~~p---------~~w~~~~~lL~~~~~~~vr~~aa~~L~~~i~~~w~~l 75 (971)
T 2x1g_F 7 ARLEEAVVSFYRS--NSQNQAITHEWLTDAEASP---------QAWQFSWQLMQLGKSQEVQFFGAITLHSKLMKHWHEV 75 (971)
T ss_dssp ----CTHHHHHTS--TTTC----CHHHHHTTTST---------HHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHCGGGC
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCH---------HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHccHhhC
Confidence 3455566555554 3345666766666654433 36777788885 568999999999999988642
Q ss_pred hHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCC----ccHHHHHHHH
Q 017926 206 PLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSS----FEIRLHRKAV 281 (363)
Q Consensus 206 p~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~----~~~klr~kA~ 281 (363)
|.-+...++...++.+.+.- .++..++.|...+|+.|+++.-+... +-++-|..+++++. .+...+.-+.
T Consensus 76 ~~~~~~~ir~~ll~~l~~~~-~~~~~vr~kl~~~la~i~~~~~p~Wp-----~~l~~l~~~~~~~~~~~~~~~~~~~~~l 149 (971)
T 2x1g_F 76 PPENREELKQKILESIVRFA-GGPKIVLNRLCISLGAYIVHMLGEWP-----GAIEEVINTFQNQRMPNVSADVQLWIML 149 (971)
T ss_dssp CGGGHHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHTTCC-----------HHHHHHHHTC----CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHcccccc-----HHHHHHHHHHhccccccCCCHHHHHHHH
Confidence 33345555666666666654 33577899999999999887433222 23455666665420 0234566777
Q ss_pred HHHHHHhhh
Q 017926 282 SLVGDLAKC 290 (363)
Q Consensus 282 ~lL~~L~~~ 290 (363)
.++..|+.+
T Consensus 150 ~iL~~l~EE 158 (971)
T 2x1g_F 150 EVLTAIPEE 158 (971)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhHHH
Confidence 888877753
No 134
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*
Probab=77.17 E-value=22 Score=34.95 Aligned_cols=181 Identities=13% Similarity=0.187 Sum_probs=125.8
Q ss_pred HHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhc-CC
Q 017926 150 SQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVK-SS 228 (363)
Q Consensus 150 k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~-s~ 228 (363)
...++|-|.-|.++-|-..-|++..|+..+-..++.++.++-...+..|-.......-|.-- -...+|-+++.+. ++
T Consensus 260 vtR~FDLL~LLmHdSnAIDGFVk~DGv~~I~TvinYpN~~l~RaG~KLLLQVSDaksL~~t~--L~e~LPFi~~~i~~h~ 337 (619)
T 3c2g_A 260 IIRTFDLLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNNDLIRAGCKLLLQVSDAKALAKTP--LENILPFLLRLIEIHP 337 (619)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCGGGGTSC--CTTHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcccccccceeecccceeEEEEeecCCcHHHHhhhheeeeecchHHHhhcc--ccccchHHHHHhccCC
Confidence 35678888888888888889999999999999999999999989998887665432111100 1256888888886 56
Q ss_pred CHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcC-C----CccHHHHHHHHHHHHHHhhhh--------h-hc
Q 017926 229 FVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGN-S----SFEIRLHRKAVSLVGDLAKCQ--------L-EN 294 (363)
Q Consensus 229 ~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s-~----~~~~klr~kA~~lL~~L~~~~--------~-~~ 294 (363)
++++...-..-||+.+.|..+-.+.-+..|++.+|-..+.. + -.+..-|..|+..+++-...- . .+
T Consensus 338 eDdvvYSGTGFLSNVVAHKq~VKelAI~~nAI~LLh~~I~ky~~Lsdf~ea~Kkk~aC~IicN~LRalNNFLMmWIPm~N 417 (619)
T 3c2g_A 338 DDEVIYSGTGFLSNVVAHKQHVKDIAIRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLNNFLMMWIPTPN 417 (619)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHTTHHHHHHHHHHTSCCGGGCCSHHHHHHHHHHHHHHHHHHHHHHGGGSCCTT
T ss_pred CcceEEecchHHHHHHhcccchHHHHhccCcHHHHHHHHhhCCChhhhhhhhhhcchHHHHHHHHHHHhhheeEEEecCC
Confidence 67888889999999999988888888889999988887532 1 123334566766666543311 0 01
Q ss_pred CCC--------CcchhHHhCCcHHHHHHhccCC--C----hhHHHHHHHHHH
Q 017926 295 MHK--------VEPPLFRDRFFLKSVVDLTASA--D----LDLQEKVFLEHV 332 (363)
Q Consensus 295 ~~~--------~~~~~l~~~g~v~~Lv~lL~~~--d----~~lqE~al~aL~ 332 (363)
+.. ...-.|++..+++.|+.+|+.+ | .+++-..++-..
T Consensus 418 Gqr~~~G~~EqQQVckFIE~d~LKrLMtCLS~e~fDv~~LlELRSTILR~F~ 469 (619)
T 3c2g_A 418 GETKTAGPNEKQQVCKFIEIDILKKLMSCLSCEGMDTPGLLELRSTILRSFI 469 (619)
T ss_dssp SCCCCCCHHHHHHHHGGGSHHHHHHHHHHHHCCC-CCTTHHHHHHHHHHHHH
T ss_pred CccccCChHHHHHHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHH
Confidence 110 1123466778999999999865 3 345555555543
No 135
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=75.46 E-value=14 Score=40.74 Aligned_cols=138 Identities=14% Similarity=0.063 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHh----cCCCCHHHHHHHHHHHHHHh
Q 017926 129 DAQLIQIAIDDLNNST--LSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQ----LNHPDTDIRKISAWILGKAS 202 (363)
Q Consensus 129 d~~lmk~al~~L~~~~--~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~l----L~s~~~~Ir~~Aa~~Lgt~a 202 (363)
+.+.|+...+.+..+. .++.-+..++-.+..+|...=..+..+.-..++++.+. ++..+.+-+..+..+||++.
T Consensus 389 t~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~~c~~~~v~~i~~~l~~~~~~~~~~~~~~~LkaLGN~g 468 (1056)
T 1lsh_A 389 TRESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAG 468 (1056)
T ss_dssp CHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCSSCCGGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccC
Confidence 3677777777766532 23344455666665555421000011122234555544 45667888899999999997
Q ss_pred ccChHHHHHHHHcCcHHHHHHhhcC-------CCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHH
Q 017926 203 QNNPLVQKQVLELGALSKLMKMVKS-------SFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIR 275 (363)
Q Consensus 203 qNNp~~Q~~~le~G~lp~Ll~LL~s-------~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~k 275 (363)
. | ..++.|.+++.. ....++..|++||..+....|.. .-+++..++.+...+..
T Consensus 469 ~--p---------~~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~~p~~--------v~~il~~i~~n~~e~~E 529 (1056)
T 1lsh_A 469 Q--P---------NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRK--------VQEIVLPIFLNVAIKSE 529 (1056)
T ss_dssp C--G---------GGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHH--------HHHHHHHHHHCTTSCHH
T ss_pred C--h---------hHHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhhchHH--------HHHHHHHHhcCCCCChH
Confidence 5 3 357788888742 13467888999999987655432 23456677655545666
Q ss_pred HHHHHHHHHH
Q 017926 276 LHRKAVSLVG 285 (363)
Q Consensus 276 lr~kA~~lL~ 285 (363)
+|.-|..+|-
T Consensus 530 vRiaA~~~Lm 539 (1056)
T 1lsh_A 530 LRIRSCIVFF 539 (1056)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776666653
No 136
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=74.34 E-value=9.7 Score=32.32 Aligned_cols=93 Identities=13% Similarity=0.062 Sum_probs=65.6
Q ss_pred HHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHH-HHH
Q 017926 236 ALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKS-VVD 314 (363)
Q Consensus 236 AL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~-Lv~ 314 (363)
.+-.|+-+|+..+.+.. ..+..|..-|++. .+..++..|+.++-.+.. |..+.+...+.+..++.. |+.
T Consensus 36 ~~leicD~I~~~~~~~k-----~a~ral~krl~~~-~n~~v~l~AL~LLd~~vk----NcG~~fh~eva~~~fl~e~Lvk 105 (157)
T 1elk_A 36 LNMEICDIINETEEGPK-----DALRAVKKRIVGN-KNFHEVMLALTVLETCVK----NCGHRFHVLVASQDFVESVLVR 105 (157)
T ss_dssp HHHHHHHHHHHSSSHHH-----HHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHH----HSCHHHHHHHTSHHHHHHHTHH
T ss_pred HHHHHHHHHhCCCccHH-----HHHHHHHHHhccC-CCHHHHHHHHHHHHHHHH----HhCHHHHHHHhhHHHHHHHHHH
Confidence 44467777776543322 3345677777642 256788999999999887 466777777778888888 788
Q ss_pred hccC---CChhHHHHHHHHHHhhcccc
Q 017926 315 LTAS---ADLDLQEKVFLEHVFCGLVF 338 (363)
Q Consensus 315 lL~~---~d~~lqE~al~aL~~~~~~~ 338 (363)
++.. ++..++++++..+..++...
T Consensus 106 ~~~~k~~~~~~Vk~kil~li~~W~~~f 132 (157)
T 1elk_A 106 TILPKNNPPTIVHDKVLNLIQSWADAF 132 (157)
T ss_dssp HHSTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HhccCCCCcHHHHHHHHHHHHHHHHHc
Confidence 8853 25689999999988666533
No 137
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=73.48 E-value=43 Score=37.26 Aligned_cols=105 Identities=11% Similarity=-0.032 Sum_probs=72.1
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhc--CCCCHHHHHHHHHHHHHHhccC----h
Q 017926 133 IQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQL--NHPDTDIRKISAWILGKASQNN----P 206 (363)
Q Consensus 133 mk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL--~s~~~~Ir~~Aa~~Lgt~aqNN----p 206 (363)
+.+++..+-++..+.+.|..|-+.|+.+-++. .+|..+...| .+.++.+|..|+.+|-+..+.+ |
T Consensus 13 l~~~l~~~~~p~~~~~~r~~Ae~~L~~~~~~p---------~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~l~ 83 (1204)
T 3a6p_A 13 LVKAVTVMMDPNSTQRYRLEALKFCEEFKEKC---------PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMS 83 (1204)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHC---------TTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGGSC
T ss_pred HHHHHHHHhCCCCChHHHHHHHHHHHHHHhCc---------hHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcccCC
Confidence 55666666677667777888888777653332 3677666544 4568999999999999988642 3
Q ss_pred HHHHHHHHcCcHHHHHHhhcC---CCHHHHHHHHHHHHHHhcC
Q 017926 207 LVQKQVLELGALSKLMKMVKS---SFVEEAVKALYTVSSLIRN 246 (363)
Q Consensus 207 ~~Q~~~le~G~lp~Ll~LL~s---~~~~v~~kAL~ALSsLiR~ 246 (363)
.-+...++...+..+...... .+..++.|...+|+.|++.
T Consensus 84 ~e~k~~Ir~~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~ 126 (1204)
T 3a6p_A 84 RLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKR 126 (1204)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHH
Confidence 445555565566665544321 3467899999999998876
No 138
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=70.77 E-value=14 Score=40.42 Aligned_cols=94 Identities=15% Similarity=0.094 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHcccCCCc-hhhH-H---hc-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHhc---cChHHHHHH
Q 017926 147 LEDSQRALQELLILVEPIDN-ANDL-S---KL-GGLSVLVGQLN-----HPDTDIRKISAWILGKASQ---NNPLVQKQV 212 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lve~iDn-An~l-~---~l-Ggl~~Li~lL~-----s~~~~Ir~~Aa~~Lgt~aq---NNp~~Q~~~ 212 (363)
=.+.+.++-.|..+.|.+.+ +... . .+ ..++.++.+++ .+++.||..++|+||.-+. .+|
T Consensus 457 W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll~~ll~s~i~~~~hp~V~~~~~~~l~rys~~~~~~~------ 530 (980)
T 3ibv_A 457 WQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQILALVTTSQVCRHPHPLVQLLYMEILVRYASFFDYES------ 530 (980)
T ss_dssp HHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHHHHHHHSSTTTCCCHHHHHHHHHHHHHTGGGGGTCC------
T ss_pred HHHHHHHHHHHHHHHhhccccccccCcccchhHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHhcCc------
Confidence 46778888888877777643 2221 0 01 12345555654 6789999999999998775 233
Q ss_pred HHcCcHHHHHHhhcC------CCHHHHHHHHHHHHHHhcCCcc
Q 017926 213 LELGALSKLMKMVKS------SFVEEAVKALYTVSSLIRNNLA 249 (363)
Q Consensus 213 le~G~lp~Ll~LL~s------~~~~v~~kAL~ALSsLiR~~~~ 249 (363)
..+|+++..+-+ ++..++..|.|++..+|+.+.+
T Consensus 531 ---~~l~~~L~~ll~~~gl~~~~~~V~~~a~~af~~f~~~~~~ 570 (980)
T 3ibv_A 531 ---AAIPALIEYFVGPRGIHNTNERVRPRAWYLFYRFVKSIKK 570 (980)
T ss_dssp ---TTHHHHHHHHTSTTTTTCCCTTTHHHHHHHHHHHHHHTTT
T ss_pred ---hhHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhhH
Confidence 456666655544 4567899999999999987665
No 139
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=68.63 E-value=74 Score=30.71 Aligned_cols=111 Identities=14% Similarity=0.136 Sum_probs=73.5
Q ss_pred cCcHHHHHHhhcC----C-------CHHHHHHHHHHHHHHhcCCcccHHHHHhc-CcHHHHHHhhcCCCccHHHHHHHHH
Q 017926 215 LGALSKLMKMVKS----S-------FVEEAVKALYTVSSLIRNNLAGQEMFYVE-AGDLMLQDILGNSSFEIRLHRKAVS 282 (363)
Q Consensus 215 ~G~lp~Ll~LL~s----~-------~~~v~~kAL~ALSsLiR~~~~a~~~f~~~-gG~~~L~~lL~s~~~~~klr~kA~~ 282 (363)
.+|+..|+.+|.. . +......++.+|-+++ |+..+.+.+... +++..|..+|.++ ..+++..++-
T Consensus 46 ~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalm-N~~~Gl~~vl~~~~~i~~l~~sL~s~--~~~~r~~vle 122 (386)
T 2bnx_A 46 AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM-NNKFGIKTMLETEEGILLLVRAMDPA--VPNMMIDAAK 122 (386)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHT-SSHHHHHHHHHSSSHHHHHHHTCCTT--SHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHh-CCHHHHHHHHcCcHHHHHHHHHhCCC--CchHHHHHHH
Confidence 5788888887742 1 1244667888888886 567778877775 6799999999876 5678888999
Q ss_pred HHHHHhhhhhhcCCCCc-ch----------hHHhCCcHHHHHHhccCC-ChhHHHHHHHHHH
Q 017926 283 LVGDLAKCQLENMHKVE-PP----------LFRDRFFLKSVVDLTASA-DLDLQEKVFLEHV 332 (363)
Q Consensus 283 lL~~L~~~~~~~~~~~~-~~----------~l~~~g~v~~Lv~lL~~~-d~~lqE~al~aL~ 332 (363)
+|..+|.. .++.. .. ...+..-...+++.+... +.+++-.++.-+.
T Consensus 123 LL~alc~~----~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~a~m~lIN 180 (386)
T 2bnx_A 123 LLSALCIL----PQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLIN 180 (386)
T ss_dssp HHHHHHTC----CSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHcC----CCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 99999863 12111 11 122334456688888743 6666665554444
No 140
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=66.74 E-value=7.1 Score=34.88 Aligned_cols=92 Identities=5% Similarity=-0.009 Sum_probs=64.6
Q ss_pred HHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHh
Q 017926 236 ALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDL 315 (363)
Q Consensus 236 AL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~l 315 (363)
.+-.|+-+|+..+.+.. ..+..|..-|++. +..++..|+.+|..++.+ ..+.+...+.+..++..|+.+
T Consensus 25 ~~leicd~i~~~~~~~k-----~a~r~l~krl~~~--n~~~~l~aL~Lle~~vkN----cG~~f~~eva~~~fl~~l~~l 93 (220)
T 1dvp_A 25 SILLICDEINQKDVTPK-----NAFAAIKKKMNSP--NPHSSCYSLLVLESIVKN----CGAPVHEEVFTKENCEMFSSF 93 (220)
T ss_dssp HHHHHHHHHHTTSSCHH-----HHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHH----SHHHHHHHHSSHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcCHH-----HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHhc----cCHHHHHHHHhHHHHHHHHHH
Confidence 34557778876554322 2344566667776 567899999999999873 445555666667788888888
Q ss_pred ccC-CChhHHHHHHHHHHhhcccc
Q 017926 316 TAS-ADLDLQEKVFLEHVFCGLVF 338 (363)
Q Consensus 316 L~~-~d~~lqE~al~aL~~~~~~~ 338 (363)
+.. .+..++++++..+..++...
T Consensus 94 ~~~~~~~~Vk~kil~li~~W~~~f 117 (220)
T 1dvp_A 94 LESTPHENVRQKMLELVQTWAYAF 117 (220)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHh
Confidence 764 47899999998888666533
No 141
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=66.31 E-value=28 Score=31.82 Aligned_cols=165 Identities=12% Similarity=0.125 Sum_probs=94.1
Q ss_pred CCCHHHHHHhHHHHHHHHHHcCCCCHHH-HHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHh
Q 017926 104 RLSPSELKKRQMEIKELMEKLKTPSDAQ-LIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQ 182 (363)
Q Consensus 104 ~~~~e~l~~r~~~Lkeal~~l~~~~d~~-lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~l 182 (363)
+++|+++. -++.++..+. +..+ +..-+.+++.+ .+ .+..++|-+.-++-+...+..+.. .+-..
T Consensus 34 ~ls~~el~----~l~~~l~~l~--~~~~~~~~~~~ki~~~--WP--~~fP~lDllRl~~~~~~~~~~l~~-----~l~~~ 98 (253)
T 3gae_A 34 TFDDEILA----QIGGALHDID--ESWELLLSFANTIRSN--WE--IKTPAYDIVRLIVKKLPYSSDIKD-----YIEEG 98 (253)
T ss_dssp CSCHHHHH----HHHHHHTCHH--HHHHHHHHHHHHHHHH--CS--CCHHHHHHHHHHGGGCSCGGGGHH-----HHHHH
T ss_pred CCCHHHHH----HHHHHHhccc--ccHHHHHHHHHHHHHh--CC--ccchHHHHHHHHHcCCchHHHHHH-----HHHHh
Confidence 78998765 3444443211 1122 22334455533 22 578899999998888877665554 12223
Q ss_pred cCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcC----C----CHHHHH---HHHHHHHHHhcCCcccH
Q 017926 183 LNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKS----S----FVEEAV---KALYTVSSLIRNNLAGQ 251 (363)
Q Consensus 183 L~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s----~----~~~v~~---kAL~ALSsLiR~~~~a~ 251 (363)
+.+.++..+..++++++++-++.+..++.+........+++.+.+ . +..++. -.++-+|....+...
T Consensus 99 ~~~~~~~~~ml~lR~l~NlF~~~~~g~~l~~~~~~~~~i~~~i~~~~~~~~~~~~~nl~iA~ATl~~N~av~~~~~~~-- 176 (253)
T 3gae_A 99 LGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDTEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS-- 176 (253)
T ss_dssp TTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTSCS--
T ss_pred cCCCchhHHHHHHHHHHHcccCCchHHHHHhcchhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHhhccc--
Confidence 445678999999999999998766456666544445555655432 1 123333 445555555444322
Q ss_pred HHHHhcCcHHHHHHhhcC----C---CccHHHHHHHHHHHHHHhh
Q 017926 252 EMFYVEAGDLMLQDILGN----S---SFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 252 ~~f~~~gG~~~L~~lL~s----~---~~~~klr~kA~~lL~~L~~ 289 (363)
+......+..++.. . ..+....-+++-++.+|+.
T Consensus 177 ----~~e~~~~l~~~i~~~~~~~e~~~~d~Ea~yR~LvAlGtL~~ 217 (253)
T 3gae_A 177 ----DLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLAT 217 (253)
T ss_dssp ----CTTHHHHHHHHHHTTTTTSHHHHHSHHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHh
Confidence 12233445555442 1 1244466778888888885
No 142
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=65.66 E-value=99 Score=29.79 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHcccCCCchhhHHh-cCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccCh-HH-HHHHHH----------
Q 017926 148 EDSQRALQELLILVEPIDNANDLSK-LGGLSVLVGQLNHPDTDIRKISAWILGKASQNNP-LV-QKQVLE---------- 214 (363)
Q Consensus 148 e~k~~AL~~L~~Lve~iDnAn~l~~-lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp-~~-Q~~~le---------- 214 (363)
+.....+..|.-+.....-.+.+.. -.++..|..+|.++++.+|..|..+|+.+|--.. .. ...+++
T Consensus 135 ~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e 214 (383)
T 3eg5_B 135 RNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDE 214 (383)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCC
Confidence 3344455555555544433444443 4578888899999999999999999999886432 22 333322
Q ss_pred cCcHHHHHHhhcC-CCHHHHHHHHHHHHHHhcCCccc------HHHHHhcCcHHHHHHhhcCC
Q 017926 215 LGALSKLMKMVKS-SFVEEAVKALYTVSSLIRNNLAG------QEMFYVEAGDLMLQDILGNS 270 (363)
Q Consensus 215 ~G~lp~Ll~LL~s-~~~~v~~kAL~ALSsLiR~~~~a------~~~f~~~gG~~~L~~lL~s~ 270 (363)
..-+..++..|.+ .+.+.+..++.-|-+++.+.+.. +..|...|-.+++.. |+..
T Consensus 215 ~~RF~~lv~~L~~~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~-lr~~ 276 (383)
T 3eg5_B 215 VERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQE-LREI 276 (383)
T ss_dssp SCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHH-HTTS
T ss_pred CCcHHHHHHHHHccCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCChHHHHHH-HhcC
Confidence 2457788999987 46688888898888888765432 344555555555555 6543
No 143
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=63.76 E-value=64 Score=33.76 Aligned_cols=158 Identities=13% Similarity=0.027 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcC
Q 017926 148 EDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKS 227 (363)
Q Consensus 148 e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s 227 (363)
..|+.+.+.|.-+ -.++.. ...+..++..+..+.=++|-.+.-.|..+ .+..++ --++++.++.-|.+
T Consensus 243 PVRETaAQtLGaL-~hLp~e-----~~IL~qLV~~l~~~~WEVRHGGLLGLKYL---~DLL~~---Ld~Vv~aVL~GL~D 310 (800)
T 3oc3_A 243 PVRDAAAYLLSRI-YPLIGP-----NDIIEQLVGFLDSGDWQVQFSGLIALGYL---KEFVED---KDGLCRKLVSLLSS 310 (800)
T ss_dssp HHHHHHHHHHHHH-TTTSCS-----CCHHHHHTTGGGCSCHHHHHHHHHHHHHT---GGGCCC---HHHHHHHHHHHTTC
T ss_pred ehHHHHHHHHHHH-HhCChh-----HHHHHHHHhhcCCCCeeehhhhHHHHHHH---HHHHHH---HHHHHHHHHhhcCC
Confidence 5566666666665 444332 33444455555666777777777777776 121211 13667888888899
Q ss_pred CCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCC
Q 017926 228 SFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRF 307 (363)
Q Consensus 228 ~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g 307 (363)
.++.|+.-|..+|..++ .+.....++. --|+.|..+ .+=+. .......||+.|+... ... -.+..
T Consensus 311 ~DDDVRAVAAetLiPIA--~p~~l~~LL~-iLWd~L~~L-DDLSA---STgSVMdLLAkL~s~p-----~~a---~~dp~ 375 (800)
T 3oc3_A 311 PDEDIKLLSAELLCHFP--ITDSLDLVLE-KCWKNIESE-ELISV---SKTSNLSLLTKIYREN-----PEL---SIPPE 375 (800)
T ss_dssp SSHHHHHHHHHHHTTSC--CSSTHHHHHH-HHHHHHHTC-CSCCT---THHHHHHHHHHHHHHC-----TTC---CCCSG
T ss_pred cccHHHHHHHHHhhhhc--chhhHHHHHH-HHHHHhhhh-cccch---hhHHHHHHHHHHHcCC-----ccc---ccChH
Confidence 89999999999999888 3333333221 123444433 21111 2346788999999753 111 11248
Q ss_pred cHHHHHHhccCCChhHHHHHHHHHH
Q 017926 308 FLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 308 ~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
.+|.|--.|++.-..+|..++.+|.
T Consensus 376 LVPRL~PFLRHtITSVR~AVL~TL~ 400 (800)
T 3oc3_A 376 RLKDIFPCFTSPVPEVRTSILNMVK 400 (800)
T ss_dssp GGGGTGGGGTCSSHHHHHHHHHHTT
T ss_pred HHHHHHhhhcCCcHHHHHHHHHHHH
Confidence 8999999999999999999999977
No 144
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=62.22 E-value=85 Score=27.83 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHcccCCCchhhHHh-cCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccCh-HH-HHHHHHc---------
Q 017926 148 EDSQRALQELLILVEPIDNANDLSK-LGGLSVLVGQLNHPDTDIRKISAWILGKASQNNP-LV-QKQVLEL--------- 215 (363)
Q Consensus 148 e~k~~AL~~L~~Lve~iDnAn~l~~-lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp-~~-Q~~~le~--------- 215 (363)
+.....+.-|.-+..+..-.+.+.. -+++..|...|.++++.+|..+..+|+.+|--.. .. ...++++
T Consensus 69 ~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e 148 (233)
T 2f31_A 69 RNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDE 148 (233)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCC
Confidence 3344555666655544433444443 4578888889999999999999999998886432 23 3333322
Q ss_pred -CcHHHHHHhhcC-CCHHHHHHHHHHHHHHhcCCccc------HHHHHhcCcHHHHHHh
Q 017926 216 -GALSKLMKMVKS-SFVEEAVKALYTVSSLIRNNLAG------QEMFYVEAGDLMLQDI 266 (363)
Q Consensus 216 -G~lp~Ll~LL~s-~~~~v~~kAL~ALSsLiR~~~~a------~~~f~~~gG~~~L~~l 266 (363)
.-+..++..+++ +..+.+..++.-|-+++.+.+.- +..|...|-.++|..+
T Consensus 149 ~~RF~~lv~~l~~~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~l 207 (233)
T 2f31_A 149 VERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQEL 207 (233)
T ss_dssp SCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred cchHHHHHHHHhcCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHH
Confidence 356678888874 45678888888888888764432 3455555555555444
No 145
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=62.07 E-value=83 Score=27.69 Aligned_cols=121 Identities=21% Similarity=0.198 Sum_probs=71.8
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHhhcCC---------------------CCHHHHHHHHHHHHHcccCCCchhhHHh
Q 017926 114 QMEIKELMEKLKTPSDAQLIQIAIDDLNNST---------------------LSLEDSQRALQELLILVEPIDNANDLSK 172 (363)
Q Consensus 114 ~~~Lkeal~~l~~~~d~~lmk~al~~L~~~~---------------------~s~e~k~~AL~~L~~Lve~iDnAn~l~~ 172 (363)
+.+.+++.+.+.+ ...++|++.|++.. .+.+.....+.-..-|++|..--=+-.-
T Consensus 10 q~yf~~It~a~~~----~~r~~aL~sL~~D~gL~~LlPyf~~fI~~~v~~nl~~l~~L~~lm~~~~ALl~N~~l~lepYl 85 (196)
T 4atg_A 10 QLYFDKILSMIKS----DMKDIAIECLEKESGLQQLVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNKHVFIDPYL 85 (196)
T ss_dssp HHHHHHHHHHHTS----TTHHHHHHHHHHCSSCTTTHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHCTTCCCGGGH
T ss_pred HHHHHHHHHHHHh----HHHHHHHHHHhcCCChhhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCChHHHH
Confidence 4455555555443 34677777775432 1233334445555556665432222222
Q ss_pred cCCHHHHHHhcCC---CCHHHHHHHHHHHHHHhcc----ChHHHHHHHHcCcHHHHHHhhcCCC--HHHHHHHHHHHHHH
Q 017926 173 LGGLSVLVGQLNH---PDTDIRKISAWILGKASQN----NPLVQKQVLELGALSKLMKMVKSSF--VEEAVKALYTVSSL 243 (363)
Q Consensus 173 lGgl~~Li~lL~s---~~~~Ir~~Aa~~Lgt~aqN----Np~~Q~~~le~G~lp~Ll~LL~s~~--~~v~~kAL~ALSsL 243 (363)
.-.+|+++.|+=+ ....+|..||.+|+.++.. +|..|..+ +..|.+-+.+++ .....-|+..|+.+
T Consensus 86 H~LipsvLtCll~k~l~~~~LRd~AA~lL~~I~~~~~~~y~~L~~RI-----~~tl~k~l~dp~~~l~t~YGAi~GL~~l 160 (196)
T 4atg_A 86 HQILPSLLTCVIGKSIVDDDVRKMSADIVKYIYDTYSRSYKTLAPRV-----LKTLKGVWMDPNRSEDSQYGALYCLSIL 160 (196)
T ss_dssp HHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTTTSTTHHHHH-----HHHHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHhCccCchHHHHH-----HHHHHHHHcCCCCChHHHHHHHHHHHHh
Confidence 3468999988722 2338999999999999964 35555543 445666665443 45677888888887
No 146
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=59.66 E-value=34 Score=28.80 Aligned_cols=120 Identities=15% Similarity=0.123 Sum_probs=73.7
Q ss_pred CCHHHHHHhHHHHHHHHHHcCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcC
Q 017926 105 LSPSELKKRQMEIKELMEKLKTPSDAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLN 184 (363)
Q Consensus 105 ~~~e~l~~r~~~Lkeal~~l~~~~d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~ 184 (363)
|||+|+..+-..|.+-|..... .|. ++. .....-=.|+.-|..+...+...+....|...|.+..+-..|.
T Consensus 1 ~~~~e~~~~~~~l~~~M~~Aa~-~D~----~a~----~~~~PA~~KlklL~~V~~~l~k~~l~~~~ld~giL~~l~~WL~ 71 (145)
T 2xpp_A 1 MDPGTVLEISRSLKKRMQDILK-KDN----ANN----LEGRPATGKIENVEEISDILMSKALQESLLDEGILDEIKGWLE 71 (145)
T ss_dssp ---CHHHHHHHHHHHHHHHHHH-HHH----HHH----HHTSCCCHHHHHHHHHHHHHTCTTTHHHHHHTTHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHH----HHH----HcCChHHHHHhhHHHHHHHHhhHHHHHHHHHcCHHHHHHHHhC
Confidence 5677766555555555542111 111 121 1111223578888999999999999999999999998877775
Q ss_pred C------CCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCC--HHHHHHHH
Q 017926 185 H------PDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSF--VEEAVKAL 237 (363)
Q Consensus 185 s------~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~--~~v~~kAL 237 (363)
- ++..||.....+|.++ |-.++.+.+.|.-..++-+-+++. ++.+..|-
T Consensus 72 PLpDgsLP~~~Ir~~lL~~L~~l----PI~~e~Lk~SglGkvv~~l~k~~~et~~nk~la~ 128 (145)
T 2xpp_A 72 PLPDKSMPNIKIRKRLLDVLKTM----KIHKEHLVTSGVGKIVYFYSINPKESKEVRASAK 128 (145)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHTS----CCCHHHHHHHCHHHHHHHHHHCTTSCHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHC----CCCHHHhhcCCCCcchhhhhcCCccCHHHHHHHH
Confidence 1 6789999999999877 434666666664444444444433 44554443
No 147
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=59.02 E-value=93 Score=28.36 Aligned_cols=119 Identities=13% Similarity=0.024 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHH-hcCCCCHHHHHHHHHHHHHHhc-cChHHHHHHHHcCcHHHHHHh
Q 017926 147 LEDSQRALQELLILVEPIDNANDLSKLGGLSVLVG-QLNHPDTDIRKISAWILGKASQ-NNPLVQKQVLELGALSKLMKM 224 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~-lL~s~~~~Ir~~Aa~~Lgt~aq-NNp~~Q~~~le~G~lp~Ll~L 224 (363)
-+.|..|..-|..+ . .+ ...|+.+.. +-..++=.||..++.+++..+. ..|+ ..++.+...
T Consensus 85 deVR~~Av~lLg~~-~-~~-------~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe--------~~l~~~~~W 147 (240)
T 3l9t_A 85 YQVRMYAVFLFGYL-S-KD-------KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK--------KALPIIDEW 147 (240)
T ss_dssp HHHHHHHHHHHHHT-T-TS-------HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT--------TTHHHHHHH
T ss_pred hHHHHHHHHHHHhc-c-Cc-------HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH--------HHHHHHHHH
Confidence 47788887766665 2 11 113444545 3356778899999999999885 5554 267888899
Q ss_pred hcCCCHHHHHHHHHHHHHHhcCCcccHHHHHh--cCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 225 VKSSFVEEAVKALYTVSSLIRNNLAGQEMFYV--EAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 225 L~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~--~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
..+++..+|+-|+-.+-.-+.. + .|.. .-.+++|..+..++ +..||+..++.|.+++.
T Consensus 148 ~~d~n~~VRR~Ase~~rpW~~~-~----~~k~dp~~ll~iL~~L~~D~--s~yVrKSVan~LrD~SK 207 (240)
T 3l9t_A 148 LKSSNLHTRRAATEGLRIWTNR-P----YFKENPNEAIRRIADLKEDV--SEYVRKSVGNALRDISK 207 (240)
T ss_dssp HHCSSHHHHHHHHHHTCSGGGS-T----TTTTCHHHHHHHHHTTTTCS--CHHHHHHHHHHHHHHHT
T ss_pred hcCCCHHHHHHHHHhhHHHhcc-c----hhhcCHHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHhh
Confidence 9999998988776654321111 1 1111 01344444444443 67899999999999986
No 148
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=53.44 E-value=77 Score=26.87 Aligned_cols=96 Identities=17% Similarity=0.200 Sum_probs=59.3
Q ss_pred cCCCHHHHHHhHHHH-HHHHHHcCCCCHHHHHHHHHHHhhcCC---------------CCHHHHHHHHHHHHHcccCCCc
Q 017926 103 QRLSPSELKKRQMEI-KELMEKLKTPSDAQLIQIAIDDLNNST---------------LSLEDSQRALQELLILVEPIDN 166 (363)
Q Consensus 103 ~~~~~e~l~~r~~~L-keal~~l~~~~d~~lmk~al~~L~~~~---------------~s~e~k~~AL~~L~~Lve~iDn 166 (363)
+++|+|+++++.+-+ +|-+.. . |.+-.-++++.+..++ ....+|+.+..-|..|...+=+
T Consensus 2 p~~s~ee~~kk~~~ii~EYf~~---~-D~~Ea~~~l~eL~~p~~~~~~V~~~I~~aldrk~~ere~~s~LL~~L~~~~ls 77 (165)
T 2rg8_A 2 LPLDERAFEKTLTPIIQEYFEH---G-DTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMS 77 (165)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHH---C-CHHHHHHHHHHHTCSGGGGHHHHHHHHHHHTSCHHHHHHHHHHHHHHBTTTBC
T ss_pred CCCCHHHHHHHHHHHHHHHHcC---C-CHHHHHHHHHHhCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHCCCC
Confidence 357888887665544 555442 1 2222333333333221 2346677777777777766666
Q ss_pred hhhHHhcCCHHHHHHhcCC---CCHHHHHHHHHHHHHHhcc
Q 017926 167 ANDLSKLGGLSVLVGQLNH---PDTDIRKISAWILGKASQN 204 (363)
Q Consensus 167 An~l~~lGgl~~Li~lL~s---~~~~Ir~~Aa~~Lgt~aqN 204 (363)
..+|.+ |+..++..|.. +-|.+-..-+..++.++..
T Consensus 78 ~~~i~~--Gf~~lle~ldDl~iDiP~a~~~la~fiarav~d 116 (165)
T 2rg8_A 78 TTDVEK--SFDKLLKDLPELALDTPRAPQLVGQFIARAVGD 116 (165)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHH--HHHHHHHhChhhcccccchHHHHHHHHHHHHHc
Confidence 777776 88888877754 5677788888888877654
No 149
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=53.14 E-value=78 Score=26.25 Aligned_cols=91 Identities=8% Similarity=0.076 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHH
Q 017926 185 HPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQ 264 (363)
Q Consensus 185 s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~ 264 (363)
++-+.|.....||+- |-+.-..+ +..+-+-+...++.-+.-+||-+-+++||...-.......+-.+.+.
T Consensus 22 nSk~~I~~LT~~a~~-----~~~~a~~I-----v~~i~~~i~k~~p~~KL~~LYL~DsIvkN~g~~y~~~F~~~l~~~f~ 91 (144)
T 1sz9_A 22 NSRPIITTLTKLAEE-----NISCAQYF-----VDAIESRIEKCMPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYK 91 (144)
T ss_dssp CCHHHHHHHHHHHHH-----TGGGHHHH-----HHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHHH
T ss_pred ccHhHHHHHHHHHHH-----HHHHHHHH-----HHHHHHHhccCCHhhHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 445566666666554 33333333 33444445556677889999999999998654444455556677777
Q ss_pred HhhcCCCccHHHHHHHHHHHHHH
Q 017926 265 DILGNSSFEIRLHRKAVSLVGDL 287 (363)
Q Consensus 265 ~lL~s~~~~~klr~kA~~lL~~L 287 (363)
+..... +...|.|...++.-=
T Consensus 92 ~~~~~~--d~~~r~k~~rL~~~W 112 (144)
T 1sz9_A 92 RTYLLV--DNTTRTKLINMFKLW 112 (144)
T ss_dssp HHHHTS--CHHHHHHHHHHHHHH
T ss_pred HHHHhC--CHHHHHHHHHHHHHH
Confidence 777654 566888877776644
No 150
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=50.60 E-value=37 Score=28.62 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=51.6
Q ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHhccC-hHHHHHHHHcCcHHH-HHHhhcCC---CHHHHHHHHHHHHHHhcCCc
Q 017926 177 SVLVGQLN-HPDTDIRKISAWILGKASQNN-PLVQKQVLELGALSK-LMKMVKSS---FVEEAVKALYTVSSLIRNNL 248 (363)
Q Consensus 177 ~~Li~lL~-s~~~~Ir~~Aa~~Lgt~aqNN-p~~Q~~~le~G~lp~-Ll~LL~s~---~~~v~~kAL~ALSsLiR~~~ 248 (363)
..|..-|+ +.++.++..|..+|-++++|. +..+..|.....+.. |++++... +..|+.|++..|-+-...++
T Consensus 56 ral~KRl~~~~n~~~~l~AL~LLe~cvkNCG~~fh~eiask~Fl~e~L~kl~~~~~~~~~~Vk~kil~li~~Wa~~F~ 133 (152)
T 3rru_A 56 KALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQGFP 133 (152)
T ss_dssp HHHHHHHTTCCBHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHTTTTGGGGSGGGCCCHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHhhHhHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 34445555 468888889999999999985 455666666667764 78888642 35789999888888765553
No 151
>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A
Probab=49.40 E-value=2e+02 Score=28.30 Aligned_cols=129 Identities=12% Similarity=0.125 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHcccCCCchhhHHhcCCHHHHH-HhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcC
Q 017926 149 DSQRALQELLILVEPIDNANDLSKLGGLSVLV-GQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKS 227 (363)
Q Consensus 149 ~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li-~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s 227 (363)
.+..++|-|..++-....+..+.. ++ ..+.+..+..+..+.++++++-++-+.-+..+........+++.+..
T Consensus 242 ~~FPaLDLLRl~v~~p~~~~~l~~------li~~~l~~~~~an~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~ 315 (425)
T 3pst_A 242 IKTPAYDIVRLIVKKLPYSSDIKD------YIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDT 315 (425)
T ss_dssp CCHHHHHHHHHHGGGCSCGGGGHH------HHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHHHHHHHSCC
T ss_pred cccHHHHHHHHHHcCCchHHHHHH------HHHHhcCCCChhHHHHHHHHHHHhcCCcchHHHHhhCchhHHHHHHHHHH
Confidence 377799999998888876654443 33 23446689999999999999998655445544333345667766642
Q ss_pred C----CH----HHHH---HHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhc-----C--CCccHHHHHHHHHHHHHHhh
Q 017926 228 S----FV----EEAV---KALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILG-----N--SSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 228 ~----~~----~v~~---kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~-----s--~~~~~klr~kA~~lL~~L~~ 289 (363)
. .. .++. -.++-+|......+.. ......+..++. . ...+....-+++-++.+|+.
T Consensus 316 ~l~~~~~~~nkNl~IA~ATLllNlAv~~~~~~~~------~el~~~l~e~l~~~~g~~E~~~~d~EA~yRlLVALGtLv~ 389 (425)
T 3pst_A 316 EFSQASAKQSQNLAIAVSTLIFNYSALVTKGNSD------LELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLAT 389 (425)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCSC------TTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHH
T ss_pred HhhhcccCCCchHHHHHHHHHHHHHHHHhcccch------HHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHh
Confidence 2 11 2322 3445555544322211 123345555554 1 01144466788888888885
No 152
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=48.17 E-value=55 Score=36.19 Aligned_cols=96 Identities=14% Similarity=0.125 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHHHhccChHHHH-HHHHcCcHHHHHHhhcCCC----H-HHHHHHHHHHHHHhc---CCcccHHHHHh
Q 017926 186 PDTDIRKISAWILGKASQNNPLVQK-QVLELGALSKLMKMVKSSF----V-EEAVKALYTVSSLIR---NNLAGQEMFYV 256 (363)
Q Consensus 186 ~~~~Ir~~Aa~~Lgt~aqNNp~~Q~-~~le~G~lp~Ll~LL~s~~----~-~v~~kAL~ALSsLiR---~~~~a~~~f~~ 256 (363)
.+-..+..++|++|+++..-..-.+ .++ -..++.|+.|..... . -++...+|.+|...| .|+. |.+
T Consensus 491 ~sW~~lea~~~aigaIag~~~~~~E~~~L-p~vi~~Ll~L~e~~~~kd~k~~vas~i~~vlgrY~~wl~~h~~----~L~ 565 (1073)
T 3gjx_A 491 WSWKNLNTLCWAIGSISGAMHEEDEKRFL-VTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWK----FLK 565 (1073)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHH-HHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHCHHHHHHCHH----HHH
T ss_pred CCHHHHhHHHHHHHHHHCcCCcccccchH-HHHHHHHhcccccccccchhHHHHHHHHHHHhhhHHHHHhCHH----HHH
Confidence 3577889999999999864332222 222 134566666654331 1 134445566665433 2222 221
Q ss_pred cCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 257 EAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 257 ~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
--+..|.+.+.++ +..++.-|+.++..+|.
T Consensus 566 -~vl~~L~~~m~~~--~~~vq~aA~~af~~i~~ 595 (1073)
T 3gjx_A 566 -TVVNKLFEFMHET--HDGVQDMACDTFIKIAQ 595 (1073)
T ss_dssp -HHHHHHHHHTTCC--STTHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhcC--CHHHHHHHHHHHHHHHH
Confidence 2345566666655 45689999999999986
No 153
>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=46.44 E-value=2.1e+02 Score=27.56 Aligned_cols=128 Identities=12% Similarity=0.144 Sum_probs=73.8
Q ss_pred HHHHHHHHHHcccCCCchhhHHhcCCHHHHH-HhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcC-
Q 017926 150 SQRALQELLILVEPIDNANDLSKLGGLSVLV-GQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKS- 227 (363)
Q Consensus 150 k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li-~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s- 227 (363)
+..++|-+..++-....+..+.. ++ ..+.+..+..+..+.++++++-++-..-+..+........+++.+..
T Consensus 180 ~FP~LDLLRl~v~~~~~~~~l~~------li~~~~~~~~~~n~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~~ 253 (362)
T 3l3f_X 180 KTPAYDIVRLIVKKLPYSSDIKD------YIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDTE 253 (362)
T ss_dssp CHHHHHHHHHHGGGCSCGGGGHH------HHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSCSC
T ss_pred cchHHHHHHHHhcCCChHHHHHH------HHHHhcCCCChhHHHHHHHHHHHhccCcchHHHHHhcchhHHHHHHHHHHH
Confidence 77799999998888876654433 33 23446689999999999999998655345444322224455555422
Q ss_pred ---CCH----HHHH---HHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhc-----CC--CccHHHHHHHHHHHHHHhh
Q 017926 228 ---SFV----EEAV---KALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILG-----NS--SFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 228 ---~~~----~v~~---kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~-----s~--~~~~klr~kA~~lL~~L~~ 289 (363)
... .++. -.++-+|......+.. ......+..++. .. ..+....-+++-++.+|+.
T Consensus 254 ~~~~~~~~nkNl~IA~ATL~lNlAv~~~~~~~~------~el~~~l~~~l~~~~g~~E~~~~d~EA~yRlLVALGtL~~ 326 (362)
T 3l3f_X 254 FSQASAKQSQNLAIAVSTLIFNYSALVTKGNSD------LELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLAT 326 (362)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHTCSC------TTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCchHHHHHHHHHHHHHHHHhcccch------HHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHh
Confidence 121 2322 3444455443322111 123345555554 10 1244566788889999885
No 154
>3hjl_A Flagellar motor switch protein FLIG; armadillo repeat motif, superhelix, conformational plasticit repeat, torque generation; 2.40A {Aquifex aeolicus}
Probab=45.41 E-value=1.4e+02 Score=28.26 Aligned_cols=121 Identities=12% Similarity=0.064 Sum_probs=60.0
Q ss_pred ChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccH----------------HHHHhcCcHHHHHHhhc
Q 017926 205 NPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQ----------------EMFYVEAGDLMLQDILG 268 (363)
Q Consensus 205 Np~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~----------------~~f~~~gG~~~L~~lL~ 268 (363)
+|..+..++.+=--..=-++|..=+.+.+...++.|+.+=+-.|... ..+...||+..+..+|+
T Consensus 129 hPQtiAlILs~L~p~~AA~vL~~Lp~~~r~ev~~Ria~l~~v~p~~l~~le~~L~~~l~~~~~~~~~~~gG~~~vA~ILN 208 (329)
T 3hjl_A 129 HPQTIALFLSQLSPKKSAEIIQNLPEELKKEVVKRIATLENVNVQYVKELAQILLEEISSLGAKEALKLEGTAVAAELLN 208 (329)
T ss_dssp CHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCHHHHHHHHHhCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcccccccccccHHHHHHHHh
Confidence 55555544443222222233333344555566666665543333321 11224688988888886
Q ss_pred CCCccHHHH------------------HHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHH
Q 017926 269 NSSFEIRLH------------------RKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLE 330 (363)
Q Consensus 269 s~~~~~klr------------------~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~a 330 (363)
.- +.... ++-.|.+.+|.. .++...+.+.+.==-..|+-.|+..+.+++++.+..
T Consensus 209 ~~--d~~~e~~il~~L~~~dpela~~Ir~~MF~Fedl~~-----lddr~iq~llrev~~~~L~~ALKga~~elrekil~n 281 (329)
T 3hjl_A 209 TL--DKETRELILQSIGQEDPLLEERIREKMFTFEDIRK-----LSDRDIIEILKVVDKNTLMIALLGAPEDIKQKFLSN 281 (329)
T ss_dssp HS--CHHHHHHHHHHHHHHCHHHHHHHHHHHSCGGGGGG-----SCHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHHTT
T ss_pred cC--ChHHHHHHHHHHHHhCHHHHHHHHHHhcCHHHHhC-----CCHHHHHHHHHhCCHHHHHHHHcCCCHHHHHHHHHh
Confidence 53 11111 122333333331 233444555544445666777777778888877655
Q ss_pred HH
Q 017926 331 HV 332 (363)
Q Consensus 331 L~ 332 (363)
+-
T Consensus 282 mS 283 (329)
T 3hjl_A 282 MS 283 (329)
T ss_dssp SC
T ss_pred cC
Confidence 43
No 155
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=38.89 E-value=1.3e+02 Score=25.13 Aligned_cols=81 Identities=12% Similarity=0.104 Sum_probs=57.6
Q ss_pred ChHHHHHHHHcCcHHHHHHhhcCC------CHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHH
Q 017926 205 NPLVQKQVLELGALSKLMKMVKSS------FVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHR 278 (363)
Q Consensus 205 Np~~Q~~~le~G~lp~Ll~LL~s~------~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~ 278 (363)
....|..+++.|++..+-.-|..- +-.+|...+.+|..+ |-..+.+.+.|--.+++.+-+++......|+
T Consensus 50 k~~l~~~~ld~giL~~l~~WL~PLpDgsLP~~~Ir~~lL~~L~~l----PI~~e~Lk~SglGkvv~~l~k~~~et~~nk~ 125 (145)
T 2xpp_A 50 SKALQESLLDEGILDEIKGWLEPLPDKSMPNIKIRKRLLDVLKTM----KIHKEHLVTSGVGKIVYFYSINPKESKEVRA 125 (145)
T ss_dssp CTTTHHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHHHHTS----CCCHHHHHHHCHHHHHHHHHHCTTSCHHHHH
T ss_pred hHHHHHHHHHcCHHHHHHHHhCcCCCCCCCCHHHHHHHHHHHHHC----CCCHHHhhcCCCCcchhhhhcCCccCHHHHH
Confidence 445799999999999998888742 236788888888776 4445555555544555555567766778899
Q ss_pred HHHHHHHHHhh
Q 017926 279 KAVSLVGDLAK 289 (363)
Q Consensus 279 kA~~lL~~L~~ 289 (363)
.|-.++..-..
T Consensus 126 la~~Li~~WsR 136 (145)
T 2xpp_A 126 SAKALVQKWTN 136 (145)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877653
No 156
>4flb_A Regulation of nuclear PRE-mRNA domain-containing; structural genomics consortium, SGC, protein binding; 1.80A {Homo sapiens}
Probab=38.71 E-value=37 Score=27.39 Aligned_cols=62 Identities=16% Similarity=0.317 Sum_probs=44.1
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCC
Q 017926 176 LSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNN 247 (363)
Q Consensus 176 l~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~ 247 (363)
+.-.++-|+++...|+..+.||+-+.- .-..+ +..+.+-+...+++-+...+|-+..++++.
T Consensus 10 l~~~L~~L~~s~~sI~~~s~w~l~h~~-----~a~~I-----v~~i~~~l~~~~~~~KL~~LYL~ndIl~ns 71 (132)
T 4flb_A 10 LDRKFQSVTNTMESIQGLSSWCIENKK-----HHSTI-----VYHWMKWLRRSAYPHRLNLFYLANDVIQNC 71 (132)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHHHHTGG-----GHHHH-----HHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCcccHHHHHHHHHHHHHhHH-----HHHHH-----HHHHHHHHHcCChhhHHHHHHHHHHHHHHh
Confidence 334455677788999999999997542 22222 344555566667777899999999999875
No 157
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=37.90 E-value=62 Score=35.49 Aligned_cols=161 Identities=16% Similarity=0.076 Sum_probs=89.3
Q ss_pred HHHHc-CCCCHHHHHHHHHHHhhcCC---CCHHHHHHHHHHHHHccc----CCCchhhHHhcCCHHHHHHhcCCCC-HHH
Q 017926 120 LMEKL-KTPSDAQLIQIAIDDLNNST---LSLEDSQRALQELLILVE----PIDNANDLSKLGGLSVLVGQLNHPD-TDI 190 (363)
Q Consensus 120 al~~l-~~~~d~~lmk~al~~L~~~~---~s~e~k~~AL~~L~~Lve----~iDnAn~l~~lGgl~~Li~lL~s~~-~~I 190 (363)
++..+ ..+-..+.+.+.++.+.... .+- .|..+|.-+.-++- -+.... +...+..++.+|.++. .+|
T Consensus 785 ~l~~ls~~~~~~~~~~~~l~~l~~~~~~s~sW-~R~~~L~~lq~~~f~n~f~l~~~~---~~~i~~~v~~~L~D~q~~EV 860 (997)
T 1vsy_5 785 LYAGLGYMPIRKNHVAAIVDYVCSSNVALSSN-QTKLQLAFIQHFLSAELLQLTEEE---KNKILEFVVSNLYNEQFVEV 860 (997)
T ss_dssp HHHHTSSSCCCHHHHHHHHHHSSCTTTTSCSS-SHHHHHHHHHHHHHHHTTTSCTTH---HHHTHHHHTTTTTCSSCHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHcCHHH---HHHHHHHHHHHhcCCccHHH
Confidence 34555 34445666777777765432 344 77777766544322 111111 1234778889999999 999
Q ss_pred HHHHHHHHHHHhccC-h-HHHHHHHH---cCc-----HHHHHHhhcCCCHHHHHHHHHHHHHHhcCCcccH--HHHHhcC
Q 017926 191 RKISAWILGKASQNN-P-LVQKQVLE---LGA-----LSKLMKMVKSSFVEEAVKALYTVSSLIRNNLAGQ--EMFYVEA 258 (363)
Q Consensus 191 r~~Aa~~Lgt~aqNN-p-~~Q~~~le---~G~-----lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~~a~--~~f~~~g 258 (363)
|..|+.+|+.+.+.. + ...+.+++ ... ...+-+-... +...+..|+.+||++|..+|... ..++= .
T Consensus 861 Re~Aa~tLsgll~c~~~~~~~~~li~~f~~~~~~~~~~~~~~~~~~~-~~~~rH~aVLgL~AlV~a~Py~vP~P~w~P-~ 938 (997)
T 1vsy_5 861 RVRAASILSDIVHNWKEEQPLLSLIERFAKGLDVNKYTSKERQKLSK-TDIKIHGNVLGLGAIISAFPYVFPLPPWIP-K 938 (997)
T ss_dssp HHHHHHHHHHHHHSCCSHHHHHHHHHHHTTSSTTTSSCHHHHHHHHH-HCHHHHHHHHHHHHHHTTCSCCSSCCTHHH-H
T ss_pred HHHHHHHHHHHHHcCCchhhHHHHHHHHHHHHhhcccccccccccch-HHHHHHHHHHHHHHHHhhCCCCCCCCcccH-H
Confidence 999999999999877 5 32222221 111 1111110000 00235689999999999887643 22220 1
Q ss_pred cHHHHHHhhcCCCccHHHHHHHHHHHHHHhh
Q 017926 259 GDLMLQDILGNSSFEIRLHRKAVSLVGDLAK 289 (363)
Q Consensus 259 G~~~L~~lL~s~~~~~klr~kA~~lL~~L~~ 289 (363)
-+..|.....++ ..++.-+-..+++.-.
T Consensus 939 ~l~~La~~~~~~---~~i~~tvk~tlseFkr 966 (997)
T 1vsy_5 939 NLSNLSSWARTS---GMTGNAAKNTISEFKK 966 (997)
T ss_dssp HHHHHHTTSSSC---SSHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhCCC---CchHHHHHHHHHHHHh
Confidence 122232223332 2266677777777754
No 158
>1j3e_A SEQA protein; protein-DNA complex, recognition of hemimethylated DNA, mismatched DNA, replication; HET: 6MA; 2.50A {Escherichia coli} SCOP: d.228.1.1 PDB: 1iu3_C
Probab=35.36 E-value=34 Score=27.75 Aligned_cols=85 Identities=15% Similarity=0.309 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhccCC-CccccccccccCCCccccccCCccchhhhcccCCcCCCCCCChHHHHhh
Q 017926 7 RIASRALWLLVLLMITMAIGRAERVNNSSS-AGLFWSTAKEDEDQPRKAERNDDSTAAAIVNDHDELDGGFSSIDGMLQW 85 (363)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LL~w 85 (363)
..++|.++++-+|-.....+-+.+...+.+ .-+-|++ ++..|++......++ -+....| |
T Consensus 20 kaV~RFl~iLs~Ly~~~p~~F~~a~~si~GR~R~YFA~--~~~~LL~~g~~tkPK-----~Ip~Tpf------------W 80 (115)
T 1j3e_A 20 RAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVYFAA--DEQTLLKNGNQTKPK-----HVPGTPY------------W 80 (115)
T ss_dssp SHHHHHHHHHHHHHHHCHHHHHHHHHTCBCSSSBCEES--SSHHHHHSSSSCCCE-----ECTTSSC------------E
T ss_pred hhHHHHHHHHHHHHHHCHHHHHHHHHHccCCCCceeCC--CHHHHHHhCCCCCCC-----cCCCCCe------------e
Confidence 357899999888888777775555543443 3445554 444555443333322 2222333 9
Q ss_pred HhhcCCCCCcccchhcccCCCHHHHHHhHHHHHHHHHHcCCCC
Q 017926 86 AIGHSDPAKLKETAQDVQRLSPSELKKRQMEIKELMEKLKTPS 128 (363)
Q Consensus 86 si~~s~~~~~~~~~~~~~~~~~e~l~~r~~~Lkeal~~l~~~~ 128 (363)
.|.|.+.+ ++|..|+++|..|+-|+
T Consensus 81 ViTN~NT~------------------rKr~ml~~vm~~mg~~~ 105 (115)
T 1j3e_A 81 VITNTNTG------------------RKCSMIEHIMQSMQFPA 105 (115)
T ss_dssp ECCCSCHH------------------HHHHHHHHHHHHTTCCH
T ss_pred eeecCChH------------------HHHHHHHHHHHHcCCCH
Confidence 98887743 47889999999998864
No 159
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=35.28 E-value=25 Score=36.76 Aligned_cols=125 Identities=20% Similarity=0.116 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhc
Q 017926 147 LEDSQRALQELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVK 226 (363)
Q Consensus 147 ~e~k~~AL~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~ 226 (363)
=|.+..+|--|.++-+-+. .| -+.++.++..|++.+.+||..||.+|.-++ .|..-. ..+..|++.|.
T Consensus 277 WEVRHGGLLGLKYL~DLL~---~L--d~Vv~aVL~GL~D~DDDVRAVAAetLiPIA--~p~~l~-----~LL~iLWd~L~ 344 (800)
T 3oc3_A 277 WQVQFSGLIALGYLKEFVE---DK--DGLCRKLVSLLSSPDEDIKLLSAELLCHFP--ITDSLD-----LVLEKCWKNIE 344 (800)
T ss_dssp HHHHHHHHHHHHHTGGGCC---CH--HHHHHHHHHHTTCSSHHHHHHHHHHHTTSC--CSSTHH-----HHHHHHHHHHH
T ss_pred eeehhhhHHHHHHHHHHHH---HH--HHHHHHHHhhcCCcccHHHHHHHHHhhhhc--chhhHH-----HHHHHHHHHhh
Confidence 4778888888888722222 12 234677778899999999999999999999 332222 34566666666
Q ss_pred CCCH--HHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHh
Q 017926 227 SSFV--EEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLA 288 (363)
Q Consensus 227 s~~~--~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~ 288 (363)
+-++ .-....+.-|+.++.+.+.+ -....-++.|-.++++. -..||..++.++..+.
T Consensus 345 ~LDDLSASTgSVMdLLAkL~s~p~~a---~~dp~LVPRL~PFLRHt--ITSVR~AVL~TL~tfL 403 (800)
T 3oc3_A 345 SEELISVSKTSNLSLLTKIYRENPEL---SIPPERLKDIFPCFTSP--VPEVRTSILNMVKNLS 403 (800)
T ss_dssp TCCSCCTTHHHHHHHHHHHHHHCTTC---CCCSGGGGGTGGGGTCS--SHHHHHHHHHHTTTCC
T ss_pred hhcccchhhHHHHHHHHHHHcCCccc---ccChHHHHHHHhhhcCC--cHHHHHHHHHHHHHHH
Confidence 5322 12345566666666643211 11124567778888887 3457777777665553
No 160
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=34.85 E-value=3.1e+02 Score=26.20 Aligned_cols=166 Identities=11% Similarity=0.055 Sum_probs=112.4
Q ss_pred HHHHHcccCCCchhhHHhcCCHHHHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcC---cHHHHHHhhcCCCHH
Q 017926 155 QELLILVEPIDNANDLSKLGGLSVLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELG---ALSKLMKMVKSSFVE 231 (363)
Q Consensus 155 ~~L~~Lve~iDnAn~l~~lGgl~~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G---~lp~Ll~LL~s~~~~ 231 (363)
.-|.+++.....|.-+...+-+..+..+.+.++=+|-..|...+-.+-..++..-..++..+ .+...-+||.+++=-
T Consensus 145 ~mLRecir~e~la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYV 224 (341)
T 1upk_A 145 IMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYV 224 (341)
T ss_dssp HHHHHHHTSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHH
T ss_pred HHHHHHHHhHHHHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcch
Confidence 33444554444555555556666777888899999999999999988888887777777654 577788899988766
Q ss_pred HHHHHHHHHHHHhcC--CcccHHHHHhc-CcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHh--C
Q 017926 232 EAVKALYTVSSLIRN--NLAGQEMFYVE-AGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRD--R 306 (363)
Q Consensus 232 v~~kAL~ALSsLiR~--~~~a~~~f~~~-gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~--~ 306 (363)
.++.++--|+-++-+ |..-...++.. .-+.+++.+|++++ -.+|..|...+.=.+... +..+.....+.. .
T Consensus 225 TkRQSlKLLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~s--k~Iq~EAFhVFKvFVANP--~K~~~I~~IL~~Nr~ 300 (341)
T 1upk_A 225 TKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKS--RNIQFEAFHVFKVFVANP--NKTQPILDILLKNQA 300 (341)
T ss_dssp HHHHHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSC--HHHHHHHHHHHHHHHHCS--SCCHHHHHHHHHTHH
T ss_pred hHHHHHHHHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCch--hchhhhhhhheeeeeeCC--CCChHHHHHHHHHHH
Confidence 689999999998865 43334444443 45889999999984 457889998888777521 111122223332 3
Q ss_pred CcHHHHHHhccCC--ChhHH
Q 017926 307 FFLKSVVDLTASA--DLDLQ 324 (363)
Q Consensus 307 g~v~~Lv~lL~~~--d~~lq 324 (363)
.++..|-+..... |..+.
T Consensus 301 kLl~fl~~f~~d~~eDeqF~ 320 (341)
T 1upk_A 301 KLIEFLSKFQNDRTEDEQFN 320 (341)
T ss_dssp HHHHHHHHTTTTC-CCSHHH
T ss_pred HHHHHHHhCCCCCcchhhHH
Confidence 5666666666543 44444
No 161
>3sk7_A Protein SEQA; sequestration, negative regulator, DNA replication initiatio binding, replication inhibitor; HET: FME; 1.50A {Vibrio cholerae}
Probab=30.94 E-value=26 Score=28.46 Aligned_cols=84 Identities=13% Similarity=0.274 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhccCC-CccccccccccCCCccccccCCccchhhhcccCCcCCCCCCChHHHHhh
Q 017926 7 RIASRALWLLVLLMITMAIGRAERVNNSSS-AGLFWSTAKEDEDQPRKAERNDDSTAAAIVNDHDELDGGFSSIDGMLQW 85 (363)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LL~w 85 (363)
..++|.|+++-+|-.....+-+.+. .+.+ .-+-|++. +..|++......++ -+.... + |
T Consensus 22 kaV~RFl~iLs~Ly~~~p~~F~~a~-~i~GR~R~YFA~s--e~~LL~~g~~tkPK-----~Ip~Tp----f--------W 81 (116)
T 3sk7_A 22 NAIDRFMLILSTLHRIDSASFSEAT-MFKGRKRVYFADN--EQTLLASGQTTKPK-----AIPNTP----F--------W 81 (116)
T ss_dssp SHHHHHHHHHHHHHHHCHHHHHHHH-HC----CCCEESS--HHHHHHHCTTSCCE-----ECTTSS----C--------E
T ss_pred hhHHHHHHHHHHHHHhCHHHHHHHH-HhcCCcceeecCC--HHHHHHcCCCCCCC-----cCCCCC----e--------e
Confidence 3678999999888887766645444 3443 44555543 44455544433322 121222 3 9
Q ss_pred HhhcCCCCCcccchhcccCCCHHHHHHhHHHHHHHHHHcCCCC
Q 017926 86 AIGHSDPAKLKETAQDVQRLSPSELKKRQMEIKELMEKLKTPS 128 (363)
Q Consensus 86 si~~s~~~~~~~~~~~~~~~~~e~l~~r~~~Lkeal~~l~~~~ 128 (363)
-|.|++.+ ++|..|+++|..|+.|+
T Consensus 82 ViTN~NT~------------------rKr~ml~~vm~~mg~~~ 106 (116)
T 3sk7_A 82 VITNNNTS------------------RKQQMVEQVMVRMGFPS 106 (116)
T ss_dssp ECCCSCHH------------------HHHHHHHHHHHHTTCCH
T ss_pred EEeCCCcH------------------HHHHHHHHHHHHcCCCH
Confidence 98887743 47889999999998864
No 162
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=28.65 E-value=3.9e+02 Score=25.51 Aligned_cols=111 Identities=18% Similarity=0.234 Sum_probs=64.8
Q ss_pred HHHHHHHHHhhcCCCCHHHH---HHHHHHHHHcccCCCc-----------------hhhHHhcCCHHHHHHhcCCC---C
Q 017926 131 QLIQIAIDDLNNSTLSLEDS---QRALQELLILVEPIDN-----------------ANDLSKLGGLSVLVGQLNHP---D 187 (363)
Q Consensus 131 ~lmk~al~~L~~~~~s~e~k---~~AL~~L~~Lve~iDn-----------------An~l~~lGgl~~Li~lL~s~---~ 187 (363)
.++.+.+..+.+...+..++ ..+|++|..++.+.++ .+-|...|-+..|+.+|..+ +
T Consensus 228 ~~l~~f~~~l~~~~i~~~~~~~v~~~L~dLi~F~~~~~~~~~~~l~~~~g~p~r~RQkLlrEq~il~ll~~iL~~~f~~~ 307 (381)
T 1n4k_A 228 KVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDC 307 (381)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTTSCCSSCSGGGGGCCCCHHHHHHHHHTTHHHHHHHHHHGGGC--
T ss_pred HHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHhcCcchhcccchhhhcCCccHHHHHHHHhhChHHHHHHHHHhhcccc
Confidence 44556666666555554433 4456666666665432 22345577788888877432 1
Q ss_pred -------------------HHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCCc
Q 017926 188 -------------------TDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNNL 248 (363)
Q Consensus 188 -------------------~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~~ 248 (363)
..|-..+-.+|..++++|.+.|..+.+. ++.+...+... .-|.-+|-.++.+|.
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~i~~l~Y~LL~~~~~~~r~Nq~y~ak~--~~~~q~qig~~-----~~a~d~i~~ll~nN~ 380 (381)
T 1n4k_A 308 GDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQ--FGFMQKQIGYD-----VLAEDTITALLHNNR 380 (381)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH--HHHHHHHHCTT-----HHHHHHHHHHHTTC-
T ss_pred CccchhhHHHhcchhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH--HHHHHHHhCcc-----ccHHHHHHHHHhcCC
Confidence 1255566788888888999999887653 55555544431 234455556666553
No 163
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=27.76 E-value=5.9e+02 Score=28.02 Aligned_cols=127 Identities=8% Similarity=-0.055 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhc--CCCHHHHHHHHHHHHHHhcCC----cccHHHHHhcCc
Q 017926 186 PDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVK--SSFVEEAVKALYTVSSLIRNN----LAGQEMFYVEAG 259 (363)
Q Consensus 186 ~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~--s~~~~v~~kAL~ALSsLiR~~----~~a~~~f~~~gG 259 (363)
.+++.|..|-..|-.+-++ | .+.+.+...|. +.+..+|.-|+..|-+.++.+ ++.....++..-
T Consensus 25 ~~~~~r~~Ae~~L~~~~~~-p---------~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~l~~e~k~~Ir~~l 94 (1204)
T 3a6p_A 25 STQRYRLEALKFCEEFKEK-C---------PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSV 94 (1204)
T ss_dssp CCHHHHHHHHHHHHHHHHH-C---------TTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGGSCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhC-c---------hHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHH
Confidence 4777888888777765332 2 23444444443 345678888888888887642 333445555444
Q ss_pred HHHHHHhhcCC-CccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHH
Q 017926 260 DLMLQDILGNS-SFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHV 332 (363)
Q Consensus 260 ~~~L~~lL~s~-~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~ 332 (363)
++.+...-... ..+..+|.|.+.++..++..- -+..- ..+++.|+.++++ +...++.++.+|.
T Consensus 95 l~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d----~p~~W-----p~ll~~L~~~~~~-~~~~~e~~L~iL~ 158 (1204)
T 3a6p_A 95 MELIANGTLNILEEENHIKDALSRIVVEMIKRE----WPQHW-----PDMLIELDTLSKQ-GETQTELVMFILL 158 (1204)
T ss_dssp HHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHH----STTTC-----TTHHHHHHHHHHT-CHHHHHHHHHHHH
T ss_pred HHHHHhhccccccccHHHHHHHHHHHHHHHHHh----Ccccc-----hHHHHHHHHHhcC-CHHHHHHHHHHHH
Confidence 55544432110 125779999999999998641 22222 3566777777765 4556676666665
No 164
>1lrr_A SEQA protein; protein-DNA complex, replication, methylated GATC, replication inhibitor/DNA complex; HET: 6MA; 2.65A {Escherichia coli} SCOP: d.228.1.1
Probab=27.42 E-value=43 Score=27.74 Aligned_cols=85 Identities=15% Similarity=0.309 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhccCC-CccccccccccCCCccccccCCccchhhhcccCCcCCCCCCChHHHHhh
Q 017926 7 RIASRALWLLVLLMITMAIGRAERVNNSSS-AGLFWSTAKEDEDQPRKAERNDDSTAAAIVNDHDELDGGFSSIDGMLQW 85 (363)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LL~w 85 (363)
..++|.++++-+|-.....+-+.+...+.+ .-+-|++ ++..|++......++ -+....| |
T Consensus 36 kaV~RFl~iLs~Ly~~~p~~F~~a~~si~GR~R~YFA~--s~e~LL~sg~~tkPK-----~Ip~Tpf------------W 96 (131)
T 1lrr_A 36 RAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVYFAA--DEQTLLKNGNQTKPK-----HVPGTPY------------W 96 (131)
T ss_dssp SHHHHHHHHHHHHHHHCHHHHHHHHHTCBCSSSBCEES--SHHHHHHHSSCCCCE-----ECTTSSC------------E
T ss_pred hhHHHHHHHHHHHHHHCHHHHHHHHHHccCCCCceeCC--CHHHHHHhCCCCCCC-----cCCCCCe------------E
Confidence 357889998888888777765555533443 3444544 444555443333322 1212333 9
Q ss_pred HhhcCCCCCcccchhcccCCCHHHHHHhHHHHHHHHHHcCCCC
Q 017926 86 AIGHSDPAKLKETAQDVQRLSPSELKKRQMEIKELMEKLKTPS 128 (363)
Q Consensus 86 si~~s~~~~~~~~~~~~~~~~~e~l~~r~~~Lkeal~~l~~~~ 128 (363)
.|.|.+.+ ++|..|+++|..|+.|.
T Consensus 97 ViTN~NT~------------------rKr~ml~~vm~~mg~~~ 121 (131)
T 1lrr_A 97 VITNTNTG------------------RKCSMIEHIMQSMQFPA 121 (131)
T ss_dssp ECCCCCHH------------------HHHHHHHHHHHHTTCCH
T ss_pred EEecCChH------------------HHHHHHHHHHHHhCCCH
Confidence 98887643 47889999999998864
No 165
>3nfq_A Transcription factor IWS1; SPN1, RNA polymerase II; 1.85A {Saccharomyces cerevisiae} PDB: 3o8z_A 3oak_A
Probab=25.85 E-value=3.2e+02 Score=23.46 Aligned_cols=81 Identities=12% Similarity=0.089 Sum_probs=56.3
Q ss_pred ChHHHHHHHHcCcHHHHHHhhcCC------CHHHHHHHHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHH
Q 017926 205 NPLVQKQVLELGALSKLMKMVKSS------FVEEAVKALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHR 278 (363)
Q Consensus 205 Np~~Q~~~le~G~lp~Ll~LL~s~------~~~v~~kAL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~ 278 (363)
....|..|++.|++..+-.-|..- +-.++...+-+|..+ |-..+.+...|--.+++.+-+++......|+
T Consensus 65 k~~L~~~~ld~giL~~l~~WLePLpDgSLP~~~Ir~~lL~~L~~l----PI~~e~Lk~SglGkvV~~l~k~~~et~~nkr 140 (170)
T 3nfq_A 65 KANLADTILDNNLLQSVRIWLEPLPDGSLPSFEIQKSLFAALNDL----PVKTEHLKESGLGRVVIFYTKSKRVEAQLAR 140 (170)
T ss_dssp CGGGHHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHHHHTS----CCCHHHHHHHSHHHHHHHHHHCTTSCHHHHH
T ss_pred HHHHHHHHHHcchHHHHHHHhCcCCCCCCCcHHHHHHHHHHHHHC----CCCHHHHhhCCCCceeeehhcCCcccHHHHH
Confidence 345899999999999988888642 236788888888865 4444445444444455555567666677888
Q ss_pred HHHHHHHHHhh
Q 017926 279 KAVSLVGDLAK 289 (363)
Q Consensus 279 kA~~lL~~L~~ 289 (363)
.|-.++..-..
T Consensus 141 la~~Li~~WsR 151 (170)
T 3nfq_A 141 LAEKLIAEWTR 151 (170)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHH
Confidence 88888887754
No 166
>3fmt_A Protein SEQA; protein-DNA complex, hemimethylated GATC, DNA replication; HET: 6MA; 2.98A {Escherichia coli}
Probab=23.99 E-value=51 Score=28.30 Aligned_cols=85 Identities=15% Similarity=0.329 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhccCC-CccccccccccCCCccccccCCccchhhhcccCCcCCCCCCChHHHHhh
Q 017926 7 RIASRALWLLVLLMITMAIGRAERVNNSSS-AGLFWSTAKEDEDQPRKAERNDDSTAAAIVNDHDELDGGFSSIDGMLQW 85 (363)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LL~w 85 (363)
..++|.+.++-+|-.....+-+.+...+.+ .-+-|++ ++..|++...-..++ -+.... | |
T Consensus 67 ~aV~RFl~iLs~Ly~~~p~~F~~a~e~i~GR~R~YFA~--~~~~LL~~g~~tkPK-----~Ip~Tp----f--------W 127 (162)
T 3fmt_A 67 RAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVYFAA--DEQTLLKNGNQTKPK-----HVPGTP----Y--------W 127 (162)
T ss_dssp SHHHHHHHHHHHHHHHCHHHHHHHHHTCCCSSCCCEES--SHHHHHHHSSSCCEE-----ECTTSS----C--------E
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHccCCCceeecC--CHHHHHHcCCCCCCC-----cCCCCC----e--------e
Confidence 367889998888888777665555544443 3444544 344455544433322 121222 3 9
Q ss_pred HhhcCCCCCcccchhcccCCCHHHHHHhHHHHHHHHHHcCCCC
Q 017926 86 AIGHSDPAKLKETAQDVQRLSPSELKKRQMEIKELMEKLKTPS 128 (363)
Q Consensus 86 si~~s~~~~~~~~~~~~~~~~~e~l~~r~~~Lkeal~~l~~~~ 128 (363)
.|.|++.+ ++|..|+++|..|+.|.
T Consensus 128 ViTN~NT~------------------rKr~ml~~vm~~mg~~~ 152 (162)
T 3fmt_A 128 VITNTNTG------------------RKCSMIEHIMQSMQFPA 152 (162)
T ss_dssp EECCSCHH------------------HHHHHHHHHHHHTTCCH
T ss_pred EEecCCcH------------------HHHHHHHHHHHHcCCCH
Confidence 99887743 47889999999998864
No 167
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=23.84 E-value=95 Score=24.83 Aligned_cols=60 Identities=13% Similarity=0.343 Sum_probs=40.6
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhhcCCCHHHHHHHHHHHHHHhcCC
Q 017926 178 VLVGQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMVKSSFVEEAVKALYTVSSLIRNN 247 (363)
Q Consensus 178 ~Li~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL~s~~~~v~~kAL~ALSsLiR~~ 247 (363)
-.+.-|+++.+.|+..+.||+-+.- .-..+ +..+.+-+...+++-+...+|-+..++++.
T Consensus 11 ~~L~~L~~s~~sI~~~s~w~l~~~~-----~a~~i-----v~~i~~~l~~~~~~~KL~~LYLindIl~ns 70 (135)
T 4fu3_A 11 KKLSELSNSQQSVQTLSLWLIHHRK-----HAGPI-----VSVWHRELRKAKSNRKLTFLYLANDVIQNS 70 (135)
T ss_dssp HHHHHCCSSTTHHHHHHHHHHHTGG-----GHHHH-----HHHHHHHHHHSCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHccccHHHHHHHHHHHHHHHH-----HHHHH-----HHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 3455567788999999999997542 22222 233444455445556889999999998763
No 168
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=23.79 E-value=4.1e+02 Score=24.04 Aligned_cols=135 Identities=10% Similarity=0.017 Sum_probs=79.9
Q ss_pred HhcCCCCHHHHHHHHHHHHHHhccChHHHHHHHHcCcHHHHHHhh-cCCCHHHHHHHHHHHHHHhc-CCcccHHHHHhcC
Q 017926 181 GQLNHPDTDIRKISAWILGKASQNNPLVQKQVLELGALSKLMKMV-KSSFVEEAVKALYTVSSLIR-NNLAGQEMFYVEA 258 (363)
Q Consensus 181 ~lL~s~~~~Ir~~Aa~~Lgt~aqNNp~~Q~~~le~G~lp~Ll~LL-~s~~~~v~~kAL~ALSsLiR-~~~~a~~~f~~~g 258 (363)
.+.+++..++|..|+.+||.+ . + . ...++.+-..+ ..++=.|+.-+..+++.++. -++..
T Consensus 78 ~L~~~~~deVR~~Av~lLg~~-~--~-~------~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe~-------- 139 (240)
T 3l9t_A 78 LAYQSDVYQVRMYAVFLFGYL-S--K-D------KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYKK-------- 139 (240)
T ss_dssp HHHTCSSHHHHHHHHHHHHHT-T--T-S------HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTTT--------
T ss_pred HHHhCcchHHHHHHHHHHHhc-c--C-c------HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHH--------
Confidence 455788899999999999988 2 1 1 12467777634 34445778878888888875 33331
Q ss_pred cHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHHHHHhccCCChhHHHHHHHHHHhhcccc
Q 017926 259 GDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKSVVDLTASADLDLQEKVFLEHVFCGLVF 338 (363)
Q Consensus 259 G~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~Lv~lL~~~d~~lqE~al~aL~~~~~~~ 338 (363)
-++.+.....++ +.-+|+-|.-.+.--+. .+..... -.-+++.|..+...++.-+|..+..+|. =+.
T Consensus 140 ~l~~~~~W~~d~--n~~VRR~Ase~~rpW~~------~~~~k~d--p~~ll~iL~~L~~D~s~yVrKSVan~Lr---D~S 206 (240)
T 3l9t_A 140 ALPIIDEWLKSS--NLHTRRAATEGLRIWTN------RPYFKEN--PNEAIRRIADLKEDVSEYVRKSVGNALR---DIS 206 (240)
T ss_dssp THHHHHHHHHCS--SHHHHHHHHHHTCSGGG------STTTTTC--HHHHHHHHHTTTTCSCHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHhcCC--CHHHHHHHHHhhHHHhc------cchhhcC--HHHHHHHHHHhcCChHHHHHHHHHHHHH---HHh
Confidence 456777778887 56677755544332121 0111000 0113444444444557777877777776 455
Q ss_pred cCchhhhh
Q 017926 339 CTCPCIVR 346 (363)
Q Consensus 339 ~~~~~~~r 346 (363)
-+.|+-.+
T Consensus 207 K~~Pd~V~ 214 (240)
T 3l9t_A 207 KKFPDLVK 214 (240)
T ss_dssp TTCHHHHH
T ss_pred hhCHHHHH
Confidence 55666554
No 169
>2ccq_A P97, peptide N-glycanase homolog; glycoprotein; 1.6A {Homo sapiens} SCOP: d.314.1.1 PDB: 2hpl_A 2hpj_A 2cm0_A
Probab=22.07 E-value=89 Score=24.34 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=23.4
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHhcc----------------ChHHHHHHHHc-CcHHHH
Q 017926 179 LVGQLNHPDTDIRKISAWILGKASQN----------------NPLVQKQVLEL-GALSKL 221 (363)
Q Consensus 179 Li~lL~s~~~~Ir~~Aa~~Lgt~aqN----------------Np~~Q~~~le~-G~lp~L 221 (363)
.+..|...+.+....|..+|.+++.| |+..|+.+... |++..|
T Consensus 6 ~l~~L~~n~~~~~~~a~~tL~k~l~Nil~~P~e~KyR~Ir~~N~~f~~~v~~~~G~~e~L 65 (99)
T 2ccq_A 6 AVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTAFSTRLLPVRGAVECL 65 (99)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHHHHCTTCGGGGEEETTCHHHHHHTTTSTTHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCCCcccceeecCCHHHHHHhcCCccHHHHH
Confidence 34445555555556666666555554 56666666554 444433
No 170
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=21.12 E-value=71 Score=26.83 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=61.1
Q ss_pred HHHHHHHHhcCCcccHHHHHhcCcHHHHHHhhcCCCccHHHHHHHHHHHHHHhhhhhhcCCCCcchhHHhCCcHHH-HHH
Q 017926 236 ALYTVSSLIRNNLAGQEMFYVEAGDLMLQDILGNSSFEIRLHRKAVSLVGDLAKCQLENMHKVEPPLFRDRFFLKS-VVD 314 (363)
Q Consensus 236 AL~ALSsLiR~~~~a~~~f~~~gG~~~L~~lL~s~~~~~klr~kA~~lL~~L~~~~~~~~~~~~~~~l~~~g~v~~-Lv~ 314 (363)
.+-.|+-+|+..+.+- ...+..|..-|.+. .+.+++..|+.++-.++. |....+...+.+..++.. |+.
T Consensus 36 ~ileicD~In~~~~~p-----keA~ral~KRl~~~-~n~~~~l~AL~LLe~cvk----NCG~~fh~eiask~Fl~e~L~k 105 (152)
T 3rru_A 36 QFMHICDIINTTQDGP-----KDAVKALKKRISKN-YNHKEIQLTLSLIDMCVQ----NCGPSFQSLIVKKEFVKENLVK 105 (152)
T ss_dssp HHHHHHHHHHHSTTHH-----HHHHHHHHHHHTTC-CBHHHHHHHHHHHHHHHH----HSCHHHHHHHSSHHHHTTTTGG
T ss_pred HHHHHHHHHhCCCccH-----HHHHHHHHHHHcCC-CChHHHHHHHHHHHHHHH----hcCHHHHHHHHhhHhHHHHHHH
Confidence 4555666776544321 23455666666642 256677788888888876 356666666666666654 666
Q ss_pred hccC---CChhHHHHHHHHHHhhcccccCch
Q 017926 315 LTAS---ADLDLQEKVFLEHVFCGLVFCTCP 342 (363)
Q Consensus 315 lL~~---~d~~lqE~al~aL~~~~~~~~~~~ 342 (363)
++.. ....++++++..+..++......+
T Consensus 106 l~~~~~~~~~~Vk~kil~li~~Wa~~F~~~p 136 (152)
T 3rru_A 106 LLNPRYNLPLDIQNRILNFIKTWSQGFPGGV 136 (152)
T ss_dssp GGSGGGCCCHHHHHHHHHHHHHHHTCCSSSC
T ss_pred HhcCCCCCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 6653 245799999999987666444333
No 171
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=20.07 E-value=2.9e+02 Score=26.40 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=54.3
Q ss_pred ccCCCHHHHHHhHHHH-HHHHHH------------cCCCC-HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHcccCCCch
Q 017926 102 VQRLSPSELKKRQMEI-KELMEK------------LKTPS-DAQLIQIAIDDLNNSTLSLEDSQRALQELLILVEPIDNA 167 (363)
Q Consensus 102 ~~~~~~e~l~~r~~~L-keal~~------------l~~~~-d~~lmk~al~~L~~~~~s~e~k~~AL~~L~~Lve~iDnA 167 (363)
.++||+++++++-+-+ +|-+.. ++.|. -+..++.++...- +....+|+.+-.-|..|+..+=..
T Consensus 45 ~p~ls~ee~~k~~~~ii~EYf~~~d~~Ea~~~l~eL~~p~~~~~~v~~~I~~aL--dr~~~erE~~s~LLs~L~~~~ls~ 122 (358)
T 3eiq_C 45 VLPLDETAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLAL--EGKASHREMTSKLLSDLCGTVMST 122 (358)
T ss_dssp -----CHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTTCCGGGGGHHHHHHHHHT--TSCHHHHHHHHHHHHTTTTTSCCH
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHHhCCCCH
Confidence 3567888887655443 444432 11111 1222333333211 124566777777777777665566
Q ss_pred hhHHhcCCHHHHHHhcCC---CCHHHHHHHHHHHHHHhcc
Q 017926 168 NDLSKLGGLSVLVGQLNH---PDTDIRKISAWILGKASQN 204 (363)
Q Consensus 168 n~l~~lGgl~~Li~lL~s---~~~~Ir~~Aa~~Lgt~aqN 204 (363)
.+|.+ |+..++..+.. +-|.+...-+..|+.++..
T Consensus 123 ~~i~~--gf~~lle~ldDl~lDiP~a~~~la~flaRaV~d 160 (358)
T 3eiq_C 123 NDVEK--SFDKLLKDLPELALDTPRAPQLVGQFIARAVGD 160 (358)
T ss_dssp HHHHH--HHHHHHHTHHHHHHHCTTHHHHHHHHHHHHHHT
T ss_pred HHHHH--HHHHHHHhhhhhccccccHHHHHHHHHHHHHHh
Confidence 66665 77777776653 5677788888888877754
Done!