Query 017931
Match_columns 363
No_of_seqs 112 out of 152
Neff 2.5
Searched_HMMs 13730
Date Mon Mar 25 07:13:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017931.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017931hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nvpc_ b.56.1.1 (C:) Large ch 100.0 3E-31 2.2E-35 192.3 6.0 47 317-363 1-47 (47)
2 d1nh2c_ b.56.1.1 (C:) Large ch 100.0 6.1E-31 4.4E-35 198.2 6.1 50 314-363 9-58 (59)
3 d1tvfa1 b.105.1.2 (A:316-383) 29.6 19 0.0014 26.4 3.1 26 325-350 24-51 (68)
4 d2b1xb1 d.17.4.4 (B:513-679) N 24.9 33 0.0024 25.9 4.0 35 318-354 125-160 (167)
5 d1o6wa1 b.72.1.1 (A:1-29) Spli 22.8 16 0.0012 22.7 1.4 17 347-363 10-26 (29)
6 d1ywia1 b.72.1.1 (A:15-42) Hun 22.8 14 0.001 22.7 1.1 17 347-363 9-25 (28)
7 d1o6wa2 b.72.1.1 (A:30-75) Spl 18.9 20 0.0014 24.2 1.3 26 333-363 13-38 (46)
8 d2rm0w1 b.72.1.1 (W:1-37) Form 16.6 26 0.0019 22.4 1.4 27 332-363 4-30 (37)
9 d2k7ia1 d.348.1.1 (A:1-62) Unc 16.5 37 0.0027 23.6 2.3 19 325-343 3-21 (62)
10 d1h8ga_ b.109.1.1 (A:) Choline 16.4 35 0.0025 24.5 2.3 21 340-360 34-54 (95)
No 1
>d1nvpc_ b.56.1.1 (C:) Large chain TOA1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=3e-31 Score=192.35 Aligned_cols=47 Identities=45% Similarity=0.943 Sum_probs=46.1
Q ss_pred CCCCEEEEEEeeeeccCCceeEEeecceeEECCeeeeeecccccccC
Q 017931 317 NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 363 (363)
Q Consensus 317 ~t~NvvLCqYDKV~R~KNKWKc~LKDGIm~INGKDyvF~KatGEfEw 363 (363)
+++|+||||||||+|+||||||+||||||+||||||||+||+|||||
T Consensus 1 ~t~n~vlc~ydKV~R~KnKWKc~lKdGim~ingkdyvF~ka~gE~eW 47 (47)
T d1nvpc_ 1 DTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 47 (47)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEEEC
T ss_pred CcceEEEEEEEEEEeecceEEEEEEeeEEEECCcEEEEEeeeeeecC
Confidence 48999999999999999999999999999999999999999999999
No 2
>d1nh2c_ b.56.1.1 (C:) Large chain TOA1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=6.1e-31 Score=198.21 Aligned_cols=50 Identities=50% Similarity=0.864 Sum_probs=44.8
Q ss_pred cCCCCCCEEEEEEeeeeccCCceeEEeecceeEECCeeeeeecccccccC
Q 017931 314 EELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 363 (363)
Q Consensus 314 Ed~~t~NvvLCqYDKV~R~KNKWKc~LKDGIm~INGKDyvF~KatGEfEw 363 (363)
|+..++|+||||||||+|+||||||+||||||+||||||||+||+|||||
T Consensus 9 ed~~~~n~vlc~yDKV~R~KnKWK~~LKdGim~ingkdy~F~ka~GE~eW 58 (59)
T d1nh2c_ 9 EDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEW 58 (59)
T ss_dssp -----CCEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEEEC
T ss_pred cCCCCCcEEEEEEEEEeeccceEEEEEeeeEEEECCeEEEEeeceEEEEe
Confidence 45678999999999999999999999999999999999999999999999
No 3
>d1tvfa1 b.105.1.2 (A:316-383) Pencillin binding protein 4 (PbpD), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=29.56 E-value=19 Score=26.42 Aligned_cols=26 Identities=23% Similarity=0.448 Sum_probs=22.1
Q ss_pred EEeeeeccCCc--eeEEeecceeEECCe
Q 017931 325 QFDKVTRTKSR--WKCALKDGIMHINNK 350 (363)
Q Consensus 325 qYDKV~R~KNK--WKc~LKDGIm~INGK 350 (363)
+||=|-+-++| ||++++||-++|+-.
T Consensus 24 lYdvVpK~~~k~~~k~~v~dgkv~vdy~ 51 (68)
T d1tvfa1 24 LYDVLPSDFSKKDYKLVVEDGKVHADYP 51 (68)
T ss_dssp EEEEEETTCCGGGCEEEEETTEEEEECS
T ss_pred hhhhccCCCCccCceEEEeCCeEEEecc
Confidence 68888888887 799999999999643
No 4
>d2b1xb1 d.17.4.4 (B:513-679) Naphthalene 1,2-dioxygenase beta subunit {Rhodococcus sp. ncimb12038 [TaxId: 92694]}
Probab=24.94 E-value=33 Score=25.92 Aligned_cols=35 Identities=14% Similarity=0.264 Sum_probs=24.8
Q ss_pred CCCEEEEEE-eeeeccCCceeEEeecceeEECCeeeee
Q 017931 318 TQHLVLAQF-DKVTRTKSRWKCALKDGIMHINNKDILF 354 (363)
Q Consensus 318 t~NvvLCqY-DKV~R~KNKWKc~LKDGIm~INGKDyvF 354 (363)
..-++.|.| |++.|+-+.||+.-| ++.++......
T Consensus 125 ~~~~~~G~Y~D~l~r~~ggwri~~R--~v~lD~~~~~~ 160 (167)
T d2b1xb1 125 TYDVLSGERTDVLRRAGDSFLMAKR--VVLLDQTTIMT 160 (167)
T ss_dssp CCEEEEEEEEEEEEEETTEEEEEEE--EEEESCSSBSS
T ss_pred cEEEEEEEEEEEEEEeCCEEEEEEE--EEEEcCCCccC
Confidence 445677888 999999999997555 45566554433
No 5
>d1o6wa1 b.72.1.1 (A:1-29) Splicing factor prp40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.80 E-value=16 Score=22.66 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=15.2
Q ss_pred ECCeeeeeecccccccC
Q 017931 347 INNKDILFNKATGEFDF 363 (363)
Q Consensus 347 INGKDyvF~KatGEfEw 363 (363)
=+||-|-|++.|+|..|
T Consensus 10 ~~G~~YYyN~~T~eS~W 26 (29)
T d1o6wa1 10 ASGRIYYYNTLTKKSTW 26 (29)
T ss_dssp TTCCEEEEETTTTEEES
T ss_pred CCCCEEEeECCCCCEec
Confidence 37999999999999877
No 6
>d1ywia1 b.72.1.1 (A:15-42) Huntingtin-interacting protein HYPA/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.79 E-value=14 Score=22.70 Aligned_cols=17 Identities=12% Similarity=0.294 Sum_probs=15.0
Q ss_pred ECCeeeeeecccccccC
Q 017931 347 INNKDILFNKATGEFDF 363 (363)
Q Consensus 347 INGKDyvF~KatGEfEw 363 (363)
=+||-|-|++.++|..|
T Consensus 9 ~~G~~YYyN~~T~eS~W 25 (28)
T d1ywia1 9 PDGRTYYYNTETKQSTW 25 (28)
T ss_dssp TTTEEEEEETTTTEEEE
T ss_pred CCCCEEEeECCCCCEec
Confidence 37999999999999876
No 7
>d1o6wa2 b.72.1.1 (A:30-75) Splicing factor prp40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.90 E-value=20 Score=24.18 Aligned_cols=26 Identities=27% Similarity=0.478 Sum_probs=21.7
Q ss_pred CCceeEEeecceeEECCeeeeeecccccccC
Q 017931 333 KSRWKCALKDGIMHINNKDILFNKATGEFDF 363 (363)
Q Consensus 333 KNKWKc~LKDGIm~INGKDyvF~KatGEfEw 363 (363)
++.|+-...+ +||-|-|++.+|+.-|
T Consensus 13 ~~~W~e~~~~-----~Gr~YYyN~~T~es~W 38 (46)
T d1o6wa2 13 ENGWKAAKTA-----DGKVYYYNPTTRETSW 38 (46)
T ss_dssp HHTCEEEECT-----TCCEEEEETTTTEEES
T ss_pred cCCCeEEECC-----CCCEEEEECCCCCEec
Confidence 6779887654 4999999999999877
No 8
>d2rm0w1 b.72.1.1 (W:1-37) Formin binding protein FBP28 domain {Domestic mouse (Mus musculus) [TaxId: 10090]}
Probab=16.56 E-value=26 Score=22.40 Aligned_cols=27 Identities=26% Similarity=0.411 Sum_probs=20.7
Q ss_pred cCCceeEEeecceeEECCeeeeeecccccccC
Q 017931 332 TKSRWKCALKDGIMHINNKDILFNKATGEFDF 363 (363)
Q Consensus 332 ~KNKWKc~LKDGIm~INGKDyvF~KatGEfEw 363 (363)
..+.|+. .++. +||-|.|++.+++..|
T Consensus 4 ~~s~W~e-~~~~----~Gr~YY~N~~T~~s~W 30 (37)
T d2rm0w1 4 AVSEWTE-YKTA----DGKTYYYNNRTLESTW 30 (37)
T ss_dssp CSCCEEE-EECT----TCCEEEEETTTTEEES
T ss_pred CccCCEE-EECC----CCCEEEEECCCCCEeC
Confidence 3567866 3333 7999999999999877
No 9
>d2k7ia1 d.348.1.1 (A:1-62) Uncharacterized protein Atu0232 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=16.51 E-value=37 Score=23.61 Aligned_cols=19 Identities=11% Similarity=0.333 Sum_probs=15.2
Q ss_pred EEeeeeccCCceeEEeecc
Q 017931 325 QFDKVTRTKSRWKCALKDG 343 (363)
Q Consensus 325 qYDKV~R~KNKWKc~LKDG 343 (363)
.|+-..-..++|+|.||.+
T Consensus 3 kFEi~~d~~g~~rfrL~a~ 21 (62)
T d2k7ia1 3 KFEIYQDKAGEYRFRFKAS 21 (62)
T ss_dssp EEEEEECTTSCEEEEECCT
T ss_pred cEEEEECCCCCEEEEEEeC
Confidence 3666677889999999976
No 10
>d1h8ga_ b.109.1.1 (A:) Choline binding domain of autolysin C-LytA {Streptococcus pneumoniae [TaxId: 1313]}
Probab=16.38 E-value=35 Score=24.53 Aligned_cols=21 Identities=14% Similarity=0.310 Sum_probs=15.9
Q ss_pred eecceeEECCeeeeeeccccc
Q 017931 340 LKDGIMHINNKDILFNKATGE 360 (363)
Q Consensus 340 LKDGIm~INGKDyvF~KatGE 360 (363)
++.|.+.|+|+.|-|...+|.
T Consensus 34 m~tGw~~~~g~~YYf~~~~G~ 54 (95)
T d1h8ga_ 34 MKTGWVKYKDTWYYLDAKEGA 54 (95)
T ss_dssp BCCEEEEETTEEEEECTTTCC
T ss_pred eEEeEEEECCeEEEEECCCCc
Confidence 556777889999999876664
Done!