BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017937
(363 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225430700|ref|XP_002264259.1| PREDICTED: GTPase Era-like [Vitis vinifera]
Length = 435
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/277 (89%), Positives = 267/277 (96%)
Query: 82 SFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLS 141
+FLSLSEKPDRNMA DDYE+EE D+AS+PNH+SGYVAVLGKPNVGKSTLANQMIGQKLS
Sbjct: 104 TFLSLSEKPDRNMALLDDYELEELDFASNPNHRSGYVAVLGKPNVGKSTLANQMIGQKLS 163
Query: 142 IVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVV 201
IVT+KPQTTRHRILGICSGPEYQMILYDTPG+IEKK+H LDSMMMKNVRSA INADC+VV
Sbjct: 164 IVTDKPQTTRHRILGICSGPEYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCVVV 223
Query: 202 LVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVI 261
LVDACK P++IDE+LEEGVG+ KDKLP LLVLNKKDLIKPGEIAKKLEWYEKF DVDEVI
Sbjct: 224 LVDACKEPQKIDEVLEEGVGNLKDKLPTLLVLNKKDLIKPGEIAKKLEWYEKFIDVDEVI 283
Query: 262 PVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPY 321
PVSAKYG GV+D++DWIL+KLPLGPAYYPKDIVSEHPERFFVGEI+REKIFMQYRNEVPY
Sbjct: 284 PVSAKYGQGVDDVKDWILSKLPLGPAYYPKDIVSEHPERFFVGEIVREKIFMQYRNEVPY 343
Query: 322 ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK
Sbjct: 344 ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 380
>gi|255561072|ref|XP_002521548.1| GTP-binding protein era, putative [Ricinus communis]
gi|223539226|gb|EEF40819.1| GTP-binding protein era, putative [Ricinus communis]
Length = 443
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/353 (73%), Positives = 300/353 (84%), Gaps = 7/353 (1%)
Query: 8 SSSFGSLFPHYSTLTAYREIKFGFQGRSSSITC--RSNEHQSLVLSEKEVQQQKLWSNQR 65
S S +LF + R +FGFQ ++++ T SN+ Q L +K QQ L S
Sbjct: 41 SCSTTNLFRRRIRTSRRRRSEFGFQVKNNTNTVFFLSNDQQ---LQKK--QQHILVSEGE 95
Query: 66 EMDLDDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPN 125
D D+ +E E ++ ++ LSLS KP+RNMA DDYE+EE DYAS PNH+SGYVAV+GKPN
Sbjct: 96 FDDDDEEEEEEEEEETNTLSLSVKPERNMALLDDYELEELDYASDPNHRSGYVAVVGKPN 155
Query: 126 VGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMM 185
VGKSTL+NQMIGQKLSIVT+KPQTTRHRILGICSGP+YQM+LYDTPG+I+K++H LDSMM
Sbjct: 156 VGKSTLSNQMIGQKLSIVTDKPQTTRHRILGICSGPDYQMVLYDTPGVIQKQMHKLDSMM 215
Query: 186 MKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIA 245
MKNVR+A INADC++V+VDACK PE+IDE+LEEGVG KDK PILLVLNKKDLIKPGEIA
Sbjct: 216 MKNVRNAAINADCVLVIVDACKVPEKIDEVLEEGVGSLKDKPPILLVLNKKDLIKPGEIA 275
Query: 246 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 305
KKLEWYEKFTDVDEVIPVSAKYGHGVEDI+DWIL+KLP GPAYYPKDIVSEHPERFFV E
Sbjct: 276 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIKDWILSKLPFGPAYYPKDIVSEHPERFFVAE 335
Query: 306 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
I+REKIFMQ+RNEVPYACQVNVVSYK+RPTAKDFIQ+EIVVEKNSQKII+IGK
Sbjct: 336 IVREKIFMQFRNEVPYACQVNVVSYKSRPTAKDFIQMEIVVEKNSQKIIIIGK 388
>gi|297735123|emb|CBI17485.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/265 (89%), Positives = 255/265 (96%)
Query: 94 MASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHR 153
MA DDYE+EE D+AS+PNH+SGYVAVLGKPNVGKSTLANQMIGQKLSIVT+KPQTTRHR
Sbjct: 1 MALLDDYELEELDFASNPNHRSGYVAVLGKPNVGKSTLANQMIGQKLSIVTDKPQTTRHR 60
Query: 154 ILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID 213
ILGICSGPEYQMILYDTPG+IEKK+H LDSMMMKNVRSA INADC+VVLVDACK P++ID
Sbjct: 61 ILGICSGPEYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCVVVLVDACKEPQKID 120
Query: 214 EILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVED 273
E+LEEGVG+ KDKLP LLVLNKKDLIKPGEIAKKLEWYEKF DVDEVIPVSAKYG GV+D
Sbjct: 121 EVLEEGVGNLKDKLPTLLVLNKKDLIKPGEIAKKLEWYEKFIDVDEVIPVSAKYGQGVDD 180
Query: 274 IRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR 333
++DWIL+KLPLGPAYYPKDIVSEHPERFFVGEI+REKIFMQYRNEVPYACQVNVVSYKTR
Sbjct: 181 VKDWILSKLPLGPAYYPKDIVSEHPERFFVGEIVREKIFMQYRNEVPYACQVNVVSYKTR 240
Query: 334 PTAKDFIQVEIVVEKNSQKIILIGK 358
PTAKDFIQVEIVVEKNSQKIILIGK
Sbjct: 241 PTAKDFIQVEIVVEKNSQKIILIGK 265
>gi|449457520|ref|XP_004146496.1| PREDICTED: GTPase Era-like [Cucumis sativus]
gi|449529894|ref|XP_004171933.1| PREDICTED: GTPase Era-like [Cucumis sativus]
Length = 433
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/281 (82%), Positives = 258/281 (91%)
Query: 78 DDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIG 137
DD SFLSL+EKPDRN+ DDYE+EE Y NH+SGY A++GKPNVGKSTL NQ+IG
Sbjct: 98 DDELSFLSLNEKPDRNLTLLDDYEMEELGYPCDLNHRSGYAALVGKPNVGKSTLVNQLIG 157
Query: 138 QKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINAD 197
QKLSIVT+KPQTTRHRILGICSGPEYQ+ILYDTPG+IEKK+H LD+MMMKNVRSA +NAD
Sbjct: 158 QKLSIVTDKPQTTRHRILGICSGPEYQVILYDTPGVIEKKMHKLDTMMMKNVRSAAVNAD 217
Query: 198 CIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDV 257
C++V+VDACKAP++IDEILE GVGD K+ P LLVLNKKDLIKPGEIAKKLEWYEKFT+V
Sbjct: 218 CVLVVVDACKAPQKIDEILEGGVGDLKEMPPTLLVLNKKDLIKPGEIAKKLEWYEKFTNV 277
Query: 258 DEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRN 317
DEVIPVSAKYGHG+ED+R+WIL+KLPLGPAYYPKDIVSEHPERFFV EI+REKIFMQYRN
Sbjct: 278 DEVIPVSAKYGHGIEDVREWILSKLPLGPAYYPKDIVSEHPERFFVSEIVREKIFMQYRN 337
Query: 318 EVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
EVPYACQVNVVSYK+RP AKDFIQ EIVVEKNSQKIILIGK
Sbjct: 338 EVPYACQVNVVSYKSRPGAKDFIQTEIVVEKNSQKIILIGK 378
>gi|22328152|ref|NP_201448.2| GTP-binding protein Era [Arabidopsis thaliana]
gi|17473914|gb|AAL38371.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|20259794|gb|AAM13244.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332010835|gb|AED98218.1| GTP-binding protein Era [Arabidopsis thaliana]
Length = 427
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/355 (68%), Positives = 284/355 (80%), Gaps = 20/355 (5%)
Query: 15 FPHYSTLTAYREIKFGFQGRSSSITCRSNEHQSLVLSEKEVQQQKLWSNQR---EMDL-- 69
F Y + R K Q +S+ + E S +KLW QR EM++
Sbjct: 27 FSPYRIYSRRRVTKSHLQAHNSTTSYGRTELSS---------SKKLWIRQRSFSEMEVEQ 77
Query: 70 ----DDGDEMEFD--DASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGK 123
DD +++E D D +S LSLS KPDRNMA DDYE+EE + + +H+SGYVAV+G
Sbjct: 78 AQLEDDEEQVEIDIVDEASLLSLSMKPDRNMALLDDYEMEELGHTPNTHHRSGYVAVVGM 137
Query: 124 PNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDS 183
PNVGKSTL+NQMIGQK+SIVT+KPQTTRHRILGICS PEYQMILYDTPG+IEKK+H LD+
Sbjct: 138 PNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHRLDT 197
Query: 184 MMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGE 243
MMMKNVR A INADC+V+LVDACK P I+E+L+EG+GD + K P+LLV+NKKDLIKPGE
Sbjct: 198 MMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDLEKKPPMLLVMNKKDLIKPGE 257
Query: 244 IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFV 303
IAKKLEWYEKFTDVDEVIPVSAKYGHG+ED+++WIL+KLP GP YYPKDIVSEHPERFFV
Sbjct: 258 IAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPERFFV 317
Query: 304 GEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
EI+REKIFMQYRNEVPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK
Sbjct: 318 SEIVREKIFMQYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGK 372
>gi|224097032|ref|XP_002310817.1| predicted protein [Populus trichocarpa]
gi|222853720|gb|EEE91267.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/278 (82%), Positives = 257/278 (92%), Gaps = 2/278 (0%)
Query: 83 FLSLSEKPDRNMASPDDYEIEEFDY--ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKL 140
LSLS KPDRN A DDYEIEE + +S+ NH+SGYVAV+GKPNVGKSTL+NQMIGQKL
Sbjct: 82 LLSLSVKPDRNTALLDDYEIEELAFHDSSNSNHRSGYVAVVGKPNVGKSTLSNQMIGQKL 141
Query: 141 SIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIV 200
SIVT+KPQTTRHRILGICS P+YQMILYDTPG+IEKK+H LDSMMMKNVRSA INADC++
Sbjct: 142 SIVTDKPQTTRHRILGICSAPDYQMILYDTPGVIEKKMHKLDSMMMKNVRSAAINADCVL 201
Query: 201 VLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEV 260
V+VDAC+APE+IDE+LEEGVG+ KD +P LLVLNKKDLIKPGEIAKKLEWYEKFT VDEV
Sbjct: 202 VIVDACRAPEKIDEMLEEGVGNLKDNVPTLLVLNKKDLIKPGEIAKKLEWYEKFTGVDEV 261
Query: 261 IPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVP 320
IPVSAK+G GVEDI++WIL+KLP+GPAYYPKDIVSEHPERFFV EI+REKIFMQ+RNEVP
Sbjct: 262 IPVSAKFGQGVEDIKEWILSKLPMGPAYYPKDIVSEHPERFFVAEIVREKIFMQFRNEVP 321
Query: 321 YACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
YACQVNVV YK RPTAKDFIQVEIVVEKN+QKII+IGK
Sbjct: 322 YACQVNVVGYKARPTAKDFIQVEIVVEKNTQKIIIIGK 359
>gi|78499699|gb|ABB45853.1| hypothetical protein [Eutrema halophilum]
Length = 429
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 280/358 (78%), Gaps = 23/358 (6%)
Query: 16 PHYSTLTAY----REIKFGFQGRSSSITCRSNEHQSLVLSEKEVQQQKLWSNQREMDLDD 71
P++ST Y R K Q SS+ S +E +KLW QR +
Sbjct: 25 PNFSTYHIYSRRSRVTKSHLQAHSST--------SSYGRTELAASAKKLWIRQRSFSETE 76
Query: 72 -----------GDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAV 120
++++ D +S LSLS KPDRNMA DDYE+EE + NH+SGYVAV
Sbjct: 77 VEQGQFEDEEEQEDIDISDEASLLSLSMKPDRNMALLDDYEMEELGHTPDTNHRSGYVAV 136
Query: 121 LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHM 180
LG PNVGKSTL+NQMIGQK+SIVT+KPQTTRHRILGICS PEYQMILYDTPG+IEKK+H
Sbjct: 137 LGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHR 196
Query: 181 LDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIK 240
LD+MMMKNVR A INADC+VVLVDACK P I+E+L+EG+G+ + + P+LLV+NKKDLIK
Sbjct: 197 LDTMMMKNVRDAAINADCVVVLVDACKMPANIEEVLKEGLGNLEKRPPMLLVMNKKDLIK 256
Query: 241 PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPER 300
PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVED+++WIL+KLP GP YYPKDIVSEHPER
Sbjct: 257 PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDVKEWILSKLPFGPPYYPKDIVSEHPER 316
Query: 301 FFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
FFV EI+REKIFMQYRNEVPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK
Sbjct: 317 FFVAEIVREKIFMQYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGK 374
>gi|312190415|gb|ADQ43214.1| GTP binding protein [Eutrema parvulum]
Length = 426
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/345 (68%), Positives = 281/345 (81%), Gaps = 21/345 (6%)
Query: 25 REIKFGFQGRSSSITCRSNEHQSLVLSEKEVQQQKLWSNQR---EMDLDDG--------D 73
R K Q ++S+I+ E S +KLW QR EM+++ G +
Sbjct: 37 RLTKSHLQAQNSTISYGRTELAS---------SKKLWIRQRSFSEMEVEQGRLEDEEEQE 87
Query: 74 EMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLAN 133
+++ D +S LSLS KPDRNMA DDYE+EE + NH+S YVAV+G PNVGKSTL+N
Sbjct: 88 DIDIGDEASLLSLSMKPDRNMALLDDYEMEELGHTPDTNHRS-YVAVVGMPNVGKSTLSN 146
Query: 134 QMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAG 193
QMIGQK+SIVT+KPQTTRHRILGICS PEYQMIL+DTPG+IEKK+H LD+MMMKNVR A
Sbjct: 147 QMIGQKISIVTDKPQTTRHRILGICSSPEYQMILFDTPGVIEKKMHRLDTMMMKNVRDAA 206
Query: 194 INADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEK 253
INADC+V+LVDACK P +I+E+L+EG+GD + + P+LLV+NKKDLIKPGEIAKKLEWYEK
Sbjct: 207 INADCVVILVDACKTPAKIEEVLKEGLGDLEKRPPMLLVMNKKDLIKPGEIAKKLEWYEK 266
Query: 254 FTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFM 313
FTDVDEVIPVSAKYGHG+ED+++WIL+KLP GP YYPKDIVSEHPERFFV EI+REKIFM
Sbjct: 267 FTDVDEVIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPERFFVAEIVREKIFM 326
Query: 314 QYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
QYRNEVPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK
Sbjct: 327 QYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGK 371
>gi|297794363|ref|XP_002865066.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297310901|gb|EFH41325.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 427
Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/280 (80%), Positives = 254/280 (90%)
Query: 79 DASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQ 138
D +S LSLS KPDRNMA DDYE+EE + +H+SGYVAVLG PNVGKSTL+NQMIGQ
Sbjct: 93 DEASLLSLSMKPDRNMALLDDYEMEELGHTPDTHHRSGYVAVLGMPNVGKSTLSNQMIGQ 152
Query: 139 KLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADC 198
K+SIVT+KPQTTRHRILGICS PEYQMILYDTPG+IEKK+H LD+MMMKNVR A INADC
Sbjct: 153 KISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINADC 212
Query: 199 IVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD 258
+V+LVDACK P I+E+L+EG+G+ + K P+LLV+NKKDLIKPGEIAKKLEWYEKFTDVD
Sbjct: 213 VVILVDACKTPTYIEEVLKEGLGNLEKKPPMLLVMNKKDLIKPGEIAKKLEWYEKFTDVD 272
Query: 259 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 318
EVIPVSAKYGHG+ED+++WIL+KLP GP YYPKDIVSEHPERFFV EI+REKIFMQYRNE
Sbjct: 273 EVIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPERFFVSEIVREKIFMQYRNE 332
Query: 319 VPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
VPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK
Sbjct: 333 VPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGK 372
>gi|356502167|ref|XP_003519892.1| PREDICTED: GTPase Era-like [Glycine max]
Length = 421
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/276 (79%), Positives = 252/276 (91%)
Query: 83 FLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSI 142
FLSLS+KPDRNMA DDYE EE D+ P+H+SGYV +LGKPNVGKSTLANQM+GQKLSI
Sbjct: 91 FLSLSDKPDRNMALLDDYEGEELDFEFGPDHRSGYVTLLGKPNVGKSTLANQMLGQKLSI 150
Query: 143 VTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVL 202
VT+KPQTTRHRIL ICSG +YQMILYD PG+++K++H LDSMMMKNVRSA +NADC++VL
Sbjct: 151 VTDKPQTTRHRILCICSGEDYQMILYDKPGVLQKEMHKLDSMMMKNVRSAAVNADCVLVL 210
Query: 203 VDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIP 262
VDA KAPE+ID +LEEG+GD KDK P LL+LNKKDL+KPGE+AKKLEWYEK TDVDEVIP
Sbjct: 211 VDARKAPEKIDGLLEEGIGDLKDKPPTLLILNKKDLVKPGELAKKLEWYEKLTDVDEVIP 270
Query: 263 VSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYA 322
VSAKYG GVED++DWIL+KLP GPAYYPKDIVSEHPERFFV EI+REKIFMQYRNE+PYA
Sbjct: 271 VSAKYGQGVEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYA 330
Query: 323 CQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
CQVNVV+YK RP AK++IQVEI+VEKNSQKIILIG+
Sbjct: 331 CQVNVVNYKARPNAKEYIQVEILVEKNSQKIILIGR 366
>gi|356559363|ref|XP_003547969.1| PREDICTED: GTPase Era-like [Glycine max]
Length = 428
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/270 (79%), Positives = 249/270 (92%)
Query: 89 KPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQ 148
KPDRNMA DDYE EE D+ P+H+SGYVA+LGKPNVGKSTLANQM+GQKLSIVT+KPQ
Sbjct: 104 KPDRNMAMLDDYEGEELDFDYGPDHRSGYVALLGKPNVGKSTLANQMLGQKLSIVTDKPQ 163
Query: 149 TTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA 208
TTRHRIL ICSG +YQMILYDTPG+++K++H+LDSMMMKNVRSA +NADC++VLVDA K
Sbjct: 164 TTRHRILCICSGTDYQMILYDTPGVLQKEMHLLDSMMMKNVRSAAVNADCVLVLVDARKT 223
Query: 209 PERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYG 268
PE+ID +LEEG+GD KDK P LL+LNKKDL+KPGE+AKKLEWYEKFT+VDEVIPVSAKYG
Sbjct: 224 PEKIDGLLEEGIGDLKDKPPTLLILNKKDLVKPGELAKKLEWYEKFTEVDEVIPVSAKYG 283
Query: 269 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 328
GVED++DWIL+KLP GPAYYPKDIVSEHPERFFV EI+REKIFMQYRNE+PYACQVNVV
Sbjct: 284 QGVEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVV 343
Query: 329 SYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
+YK RP AK++IQVEI+VEKN+QKIILIG+
Sbjct: 344 NYKARPNAKEYIQVEILVEKNTQKIILIGR 373
>gi|222632589|gb|EEE64721.1| hypothetical protein OsJ_19577 [Oryza sativa Japonica Group]
Length = 423
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/275 (76%), Positives = 249/275 (90%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIV 143
L L EKPDR++ D+YE EE + NH+SGYVAVLGKPNVGKSTL NQ++GQKLSIV
Sbjct: 94 LELIEKPDRSLCLLDEYESEELGTSHCANHRSGYVAVLGKPNVGKSTLINQIVGQKLSIV 153
Query: 144 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 203
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LD+MMMKNVRSA +ADC++V+V
Sbjct: 154 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDTMMMKNVRSAVGSADCVLVVV 213
Query: 204 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 263
DACK PE+IDEILEEGVG+ +LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+ D+VIP+
Sbjct: 214 DACKMPEKIDEILEEGVGNKDTELPVLLVLNKKDLIKPGEIAKKLEWYQKFTNADDVIPI 273
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PYAC
Sbjct: 274 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYRQEIPYAC 333
Query: 324 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
QVNV+SYK+RPTAKDFIQVEI+VEK SQ+ I++GK
Sbjct: 334 QVNVISYKSRPTAKDFIQVEILVEKESQRSIILGK 368
>gi|125553352|gb|EAY99061.1| hypothetical protein OsI_21018 [Oryza sativa Indica Group]
Length = 423
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/275 (76%), Positives = 249/275 (90%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIV 143
L L EKPDR++ D+YE EE + NH+SGYVAVLGKPNVGKSTL NQ++GQKLSIV
Sbjct: 94 LELIEKPDRSLCLLDEYESEELGTSHCANHRSGYVAVLGKPNVGKSTLINQIVGQKLSIV 153
Query: 144 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 203
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LD+MMMKNVRSA +ADC++V+V
Sbjct: 154 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDTMMMKNVRSAVGSADCVLVVV 213
Query: 204 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 263
DACK PE+IDEILEEGVG+ +LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+ D+VIP+
Sbjct: 214 DACKMPEKIDEILEEGVGNKDTELPVLLVLNKKDLIKPGEIAKKLEWYQKFTNADDVIPI 273
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PYAC
Sbjct: 274 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYRQEIPYAC 333
Query: 324 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
QVNV+SYK+RPTAKDFIQVEI+VEK SQ+ I++GK
Sbjct: 334 QVNVISYKSRPTAKDFIQVEILVEKESQRSIILGK 368
>gi|413948515|gb|AFW81164.1| GTP-binding protein era [Zea mays]
Length = 416
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/275 (76%), Positives = 248/275 (90%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIV 143
L L EKPDR++A D+YE EE + NH+SGYVAVLGKPNVGKSTL NQM+GQKLSIV
Sbjct: 87 LELIEKPDRSLALLDEYESEELGTSLCANHRSGYVAVLGKPNVGKSTLINQMVGQKLSIV 146
Query: 144 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 203
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNVRSA +ADC++V+
Sbjct: 147 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVRSAIGSADCVLVVA 206
Query: 204 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 263
DACK PE+IDE+LEEGVG+ LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+VD+VIP+
Sbjct: 207 DACKTPEKIDEMLEEGVGNKDIGLPVLLVLNKKDLIKPGEIAKKLEWYQKFTNVDDVIPI 266
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PY+C
Sbjct: 267 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFVQYRQEIPYSC 326
Query: 324 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
QVNVVSYK+RP AKDFIQVEI+VEK SQ+ I++GK
Sbjct: 327 QVNVVSYKSRPAAKDFIQVEILVEKESQRGIILGK 361
>gi|242091397|ref|XP_002441531.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor]
gi|241946816|gb|EES19961.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor]
Length = 459
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/275 (76%), Positives = 250/275 (90%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIV 143
L L EKPDR++A D+YE EE + NH+SGYVAVLGKPNVGKSTL NQM+GQKLSIV
Sbjct: 89 LELIEKPDRSLALLDEYESEELGTSLCANHRSGYVAVLGKPNVGKSTLINQMVGQKLSIV 148
Query: 144 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 203
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNVRSA +ADC++V+
Sbjct: 149 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVRSAIGSADCVLVVA 208
Query: 204 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 263
DACKAPE+IDE+LEEGVG+ LP+LLVLNKKDLIKPGEIAKKLEWY+KFT+VD+VIP+
Sbjct: 209 DACKAPEKIDEMLEEGVGNKDIALPVLLVLNKKDLIKPGEIAKKLEWYQKFTNVDDVIPI 268
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SAK+G+GV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PY+C
Sbjct: 269 SAKFGNGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFVQYRQEIPYSC 328
Query: 324 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
QVNVVSYK+RPTAKDFIQVEI+VEK +Q+ I++GK
Sbjct: 329 QVNVVSYKSRPTAKDFIQVEILVEKETQRSIILGK 363
>gi|357132500|ref|XP_003567868.1| PREDICTED: GTPase Era-like [Brachypodium distachyon]
Length = 404
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/275 (73%), Positives = 249/275 (90%)
Query: 84 LSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIV 143
L L EKPDR++A D+YE EE + NH+SGYVAVLGKPNVGKSTL NQ++GQKLSIV
Sbjct: 75 LELIEKPDRSLALLDEYESEELGTSQCANHRSGYVAVLGKPNVGKSTLINQIVGQKLSIV 134
Query: 144 TNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLV 203
T+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNVRSA NADC++V+V
Sbjct: 135 TDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVRSAIGNADCVLVVV 194
Query: 204 DACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV 263
DACK PE+ID++LEEGVG+ +PI+L+LNKKD+I+PGEIAK+LEWY+KFT+VD+VIP+
Sbjct: 195 DACKVPEKIDDMLEEGVGNKDTPVPIVLILNKKDMIRPGEIAKRLEWYQKFTNVDDVIPI 254
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR E+PYAC
Sbjct: 255 SAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYRQEIPYAC 314
Query: 324 QVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
QVNV+ YK+RP+AKDFIQVEI+VE+ SQ+ I++GK
Sbjct: 315 QVNVIGYKSRPSAKDFIQVEILVERESQRSIILGK 349
>gi|10177528|dbj|BAB10923.1| GTP-binding protein-like [Arabidopsis thaliana]
Length = 353
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/298 (71%), Positives = 243/298 (81%), Gaps = 33/298 (11%)
Query: 94 MASPDDYEIEEFDYASHPNHKSG---------------------------------YVAV 120
MA DDYE+EE + + +H+SG YVAV
Sbjct: 1 MALLDDYEMEELGHTPNTHHRSGLFVFSLNPILTEKLKFGYYDWETEFGDYGCYIGYVAV 60
Query: 121 LGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHM 180
+G PNVGKSTL+NQMIGQK+SIVT+KPQTTRHRILGICS PEYQMILYDTPG+IEKK+H
Sbjct: 61 VGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHR 120
Query: 181 LDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIK 240
LD+MMMKNVR A INADC+V+LVDACK P I+E+L+EG+GD + K P+LLV+NKKDLIK
Sbjct: 121 LDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDLEKKPPMLLVMNKKDLIK 180
Query: 241 PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPER 300
PGEIAKKLEWYEKFTDVDEVIPVSAKYGHG+ED+++WIL+KLP GP YYPKDIVSEHPER
Sbjct: 181 PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPER 240
Query: 301 FFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
FFV EI+REKIFMQYRNEVPYACQVNV+SYKTRP AKDFIQVE+VV+KNSQKIILIGK
Sbjct: 241 FFVSEIVREKIFMQYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGK 298
>gi|102139740|gb|ABF69947.1| GTPase family protein [Musa acuminata]
Length = 305
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/244 (83%), Positives = 230/244 (94%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
+GYVAVLG+PNVGKSTL+NQMIGQKLSIVT KPQTTRHRILGICSGPEYQMILYDTPG+I
Sbjct: 7 AGYVAVLGRPNVGKSTLSNQMIGQKLSIVTEKPQTTRHRILGICSGPEYQMILYDTPGVI 66
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
EKK+HMLDSMMMKNVRSA INADC++V+VDACK P +ID++LEEG+G +D LPILLVLN
Sbjct: 67 EKKMHMLDSMMMKNVRSAAINADCVLVVVDACKVPHKIDDVLEEGIGTLRDNLPILLVLN 126
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
KKDLIKPGEIAK+LEWY+KFT+VD+VIPVSAK+G GV+D++DWIL+KLP GPAYYPKDI
Sbjct: 127 KKDLIKPGEIAKRLEWYQKFTNVDDVIPVSAKFGQGVDDVKDWILSKLPFGPAYYPKDIA 186
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
SEHPERFFV EI+REKIF QYRNEVPYACQVNV++Y +RPT+KDFIQVEIVVEK SQKII
Sbjct: 187 SEHPERFFVAEIVREKIFTQYRNEVPYACQVNVLNYISRPTSKDFIQVEIVVEKESQKII 246
Query: 355 LIGK 358
LIGK
Sbjct: 247 LIGK 250
>gi|294463173|gb|ADE77123.1| unknown [Picea sitchensis]
Length = 433
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/280 (67%), Positives = 232/280 (82%), Gaps = 5/280 (1%)
Query: 84 LSLSEKPDR--NMASPDDYEIEEFDYAS---HPNHKSGYVAVLGKPNVGKSTLANQMIGQ 138
+SL++KP+R N+ ++DY P+H+SGYVAV+GKPNVGKSTL NQMIGQ
Sbjct: 99 VSLNDKPERMLNVKEEGADNGGDYDYGDLSVGPDHRSGYVAVVGKPNVGKSTLLNQMIGQ 158
Query: 139 KLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADC 198
KLSIVT+KPQTTRHRILG+CS P+YQM+LYDTPG+I+K++H LD+MMMKNV SA NADC
Sbjct: 159 KLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTPGVIQKEMHKLDAMMMKNVHSATGNADC 218
Query: 199 IVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD 258
++ +VD CK PE+++++ EE D K K P LLVLNKKDL+KPGEIAK++EWYEKF D
Sbjct: 219 VLTVVDVCKVPEKVNDLFEEDGVDLKKKPPTLLVLNKKDLMKPGEIAKRMEWYEKFGGAD 278
Query: 259 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNE 318
++ +SAKYGHGVED+++WI++KLP GPAYY KDI+SEHPERFFV EI+REKIFMQYR E
Sbjct: 279 HILSISAKYGHGVEDVKNWIVSKLPYGPAYYSKDIISEHPERFFVAEIVREKIFMQYRQE 338
Query: 319 VPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
VPYACQVNV SY RPT+K FI++EIVVEK +QKIILIGK
Sbjct: 339 VPYACQVNVASYIARPTSKHFIEIEIVVEKGAQKIILIGK 378
>gi|326504644|dbj|BAK06613.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 303
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/237 (74%), Positives = 212/237 (89%)
Query: 80 ASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQK 139
A L L EKPDR++A D+YE EE A NH+SGYVAVLGKPNVGKSTL NQ++GQK
Sbjct: 67 ARPRLELIEKPDRSLALLDEYESEELGAALCANHRSGYVAVLGKPNVGKSTLINQIVGQK 126
Query: 140 LSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 199
LSIVT+KPQTTRHRILGICS PEYQ+ILYDTPG+I+K++H LDSMMMKNV+SA NADC+
Sbjct: 127 LSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDSMMMKNVQSAIGNADCV 186
Query: 200 VVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE 259
+V+ DA K PE+ID++LEEGVG+ + K+P++LVLNKKD+IKPGEIAKKLEWY+KFTDVD+
Sbjct: 187 IVVADASKVPEKIDDMLEEGVGNKETKVPVVLVLNKKDMIKPGEIAKKLEWYQKFTDVDD 246
Query: 260 VIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYR 316
VIP+SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEHPERFFVGEI+REKIF+QYR
Sbjct: 247 VIPISAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYR 303
>gi|168064687|ref|XP_001784291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664167|gb|EDQ50897.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/248 (68%), Positives = 201/248 (81%), Gaps = 7/248 (2%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
+GYVA++GKPN GKSTL NQ+IGQKLSIVTNKPQTTRHRILGICSGP+YQM+LYDTPG+I
Sbjct: 2 AGYVALVGKPNAGKSTLLNQIIGQKLSIVTNKPQTTRHRILGICSGPDYQMVLYDTPGVI 61
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEG----VGDHKDKLPIL 230
K++ LD MMM+NVR+A +NADC++++VDAC+ PE + L +G V D++ P L
Sbjct: 62 SKQVKKLDEMMMRNVRTATLNADCVLIVVDACEQPEEVMSRLTDGQQTLVTDNR---PTL 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LVLNKKDLIKPGEIAKK WYE EVI VSAK G GV+ I++W+L +LP GPAYYP
Sbjct: 119 LVLNKKDLIKPGEIAKKKAWYELNGGTTEVIAVSAKQGAGVDKIKEWLLGRLPYGPAYYP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD+VSEHPERFFV EI+REKIF+QYR E+PY CQVNV SY R AKDFIQ+EIVVEK
Sbjct: 179 KDVVSEHPERFFVSEILREKIFLQYRQEIPYVCQVNVTSYMERRVAKDFIQLEIVVEKEG 238
Query: 351 QKIILIGK 358
QK IL+GK
Sbjct: 239 QKGILLGK 246
>gi|302754754|ref|XP_002960801.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii]
gi|300171740|gb|EFJ38340.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii]
Length = 330
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/252 (65%), Positives = 199/252 (78%), Gaps = 1/252 (0%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A +SGYVA++GKPNVGKSTL N +IGQKLSIVT KPQTTRHRILGICSGP YQMIL
Sbjct: 22 ADCSKFQSGYVALIGKPNVGKSTLLNGIIGQKLSIVTAKPQTTRHRILGICSGPNYQMIL 81
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
YDTPG+I K++H LD +MMK+VRSA IN+DC++++ D C PE++ L+EG +
Sbjct: 82 YDTPGVITKQMHKLDELMMKSVRSATINSDCLLLIADICHPPEQVLGTLDEGAVNLIKSK 141
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P LLVLNKKD +K EI KK EWYEK + +DEVIPVSAK+G G+E+++ W+++KLPLGPA
Sbjct: 142 PTLLVLNKKDKVKQSEIQKKQEWYEKNSGMDEVIPVSAKFGLGIEEVKQWLVSKLPLGPA 201
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AKDFIQVEIVV 346
YYP+DIVSEH ERFFV EI REKIF YR E+PY QVNVV Y R AKDFI++EI+V
Sbjct: 202 YYPRDIVSEHQERFFVSEIFREKIFQLYREEIPYCSQVNVVRYVEREAPAKDFIEIEILV 261
Query: 347 EKNSQKIILIGK 358
EK SQK IL+GK
Sbjct: 262 EKESQKAILLGK 273
>gi|302804232|ref|XP_002983868.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii]
gi|300148220|gb|EFJ14880.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii]
Length = 330
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 199/252 (78%), Gaps = 1/252 (0%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A ++GYVA++GKPNVGKSTL N +IGQKLSIVT KPQTTRHRILGICSGP YQMIL
Sbjct: 22 ADCSKFQAGYVALIGKPNVGKSTLLNGIIGQKLSIVTAKPQTTRHRILGICSGPNYQMIL 81
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
YDTPG+I K++H LD +MMK+VRSA IN+DC++++ D C PE++ L+EG +
Sbjct: 82 YDTPGVITKQMHKLDELMMKSVRSATINSDCLLLIADICHPPEQVLGTLDEGAVNLIKSK 141
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P LLVLNKKD +K EI KK EWYEK + +DEVIPVSAK+G G+E+++ W+++KLPLGPA
Sbjct: 142 PTLLVLNKKDKVKQSEIQKKQEWYEKNSGMDEVIPVSAKFGLGIEEVKQWLVSKLPLGPA 201
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AKDFIQVEIVV 346
YYP+DIVSEH ERFFV EI REKIF YR E+PY QVNVV Y R AKDFI++EI+V
Sbjct: 202 YYPRDIVSEHQERFFVSEIFREKIFQLYREEIPYCSQVNVVRYVEREAPAKDFIEIEILV 261
Query: 347 EKNSQKIILIGK 358
EK SQK IL+GK
Sbjct: 262 EKESQKAILLGK 273
>gi|51854284|gb|AAU10665.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|215767306|dbj|BAG99534.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 141/181 (77%), Positives = 169/181 (93%)
Query: 178 IHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 237
+H LD+MMMKNVRSA +ADC++V+VDACK PE+IDEILEEGVG+ +LP+LLVLNKKD
Sbjct: 1 MHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNKDTELPVLLVLNKKD 60
Query: 238 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 297
LIKPGEIAKKLEWY+KFT+ D+VIP+SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEH
Sbjct: 61 LIKPGEIAKKLEWYQKFTNADDVIPISAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEH 120
Query: 298 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 357
PERFFVGEI+REKIF+QYR E+PYACQVNV+SYK+RPTAKDFIQVEI+VEK SQ+ I++G
Sbjct: 121 PERFFVGEIVREKIFLQYRQEIPYACQVNVISYKSRPTAKDFIQVEILVEKESQRSIILG 180
Query: 358 K 358
K
Sbjct: 181 K 181
>gi|294460854|gb|ADE76000.1| unknown [Picea sitchensis]
Length = 324
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 143/225 (63%), Positives = 183/225 (81%), Gaps = 5/225 (2%)
Query: 84 LSLSEKPDR--NMASPDDYEIEEFDYAS---HPNHKSGYVAVLGKPNVGKSTLANQMIGQ 138
+SL++KP+R N+ ++DY P+H+SGYVAV+GKPNVGKSTL NQMIGQ
Sbjct: 99 VSLNDKPERMLNVKEEGADNGGDYDYGDLSVGPDHRSGYVAVVGKPNVGKSTLLNQMIGQ 158
Query: 139 KLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADC 198
KLSIVT+KPQTTRHRILG+CS P+YQM+LYDTPG+I+K++H LD+MMMKNV SA NADC
Sbjct: 159 KLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTPGVIQKEMHKLDAMMMKNVHSATGNADC 218
Query: 199 IVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD 258
++ +VD C+ PE+++++ EE D K K P LLVLNKKDL+KPGEIAK++EWYEKF D
Sbjct: 219 VLTVVDVCRVPEKVNDLFEEDGVDLKKKPPTLLVLNKKDLMKPGEIAKRMEWYEKFGGAD 278
Query: 259 EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFV 303
++ +SAKYGHGVED+++WI++KLP GPAYY KDI+SEHPERFF
Sbjct: 279 HILSISAKYGHGVEDVKNWIVSKLPYGPAYYSKDIISEHPERFFC 323
>gi|219363705|ref|NP_001136454.1| uncharacterized protein LOC100216562 [Zea mays]
gi|194695756|gb|ACF81962.1| unknown [Zea mays]
gi|195627606|gb|ACG35633.1| GTP-binding protein era [Zea mays]
gi|413948514|gb|AFW81163.1| GTP-binding protein era [Zea mays]
Length = 236
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/181 (77%), Positives = 167/181 (92%)
Query: 178 IHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 237
+H LDSMMMKNVRSA +ADC++V+ DACK PE+IDE+LEEGVG+ LP+LLVLNKKD
Sbjct: 1 MHKLDSMMMKNVRSAIGSADCVLVVADACKTPEKIDEMLEEGVGNKDIGLPVLLVLNKKD 60
Query: 238 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 297
LIKPGEIAKKLEWY+KFT+VD+VIP+SAK+GHGV+DI++WIL+KLPLGPAYYPKDI SEH
Sbjct: 61 LIKPGEIAKKLEWYQKFTNVDDVIPISAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEH 120
Query: 298 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 357
PERFFVGEI+REKIF+QYR E+PY+CQVNVVSYK+RP AKDFIQVEI+VEK SQ+ I++G
Sbjct: 121 PERFFVGEIVREKIFVQYRQEIPYSCQVNVVSYKSRPAAKDFIQVEILVEKESQRGIILG 180
Query: 358 K 358
K
Sbjct: 181 K 181
>gi|255087368|ref|XP_002505607.1| predicted protein [Micromonas sp. RCC299]
gi|226520877|gb|ACO66865.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/248 (52%), Positives = 176/248 (70%), Gaps = 5/248 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SGYVA++G+PN GKSTL NQ++G KLSIVT KPQTTRHRILGI S YQM+L DTPG
Sbjct: 1 HRSGYVAIVGRPNAGKSTLLNQLVGTKLSIVTFKPQTTRHRILGIVSEDHYQMVLLDTPG 60
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK-DKLPILL 231
+++++ + LD MM+K+VR+A NAD ++ +VDA + P E L + +H+ + P+ +
Sbjct: 61 VMKEEFNKLDEMMLKSVRNAMANADVLLAIVDATRDPYGAFEGL---LPEHRANPAPLGV 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DL++ EI + E++E V+ V PVSA G G + +R+W LT LP GP YPK
Sbjct: 118 IINKCDLLQVDEIREVKEYFEGIPGVERVFPVSALAGVGHDAVREWALTHLPEGPTLYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNS 350
D +SEHPERFF+ EIIREKIF+QY+ EVPY+ QV V S+K R KD I +I E+ S
Sbjct: 178 DTISEHPERFFIAEIIREKIFLQYQQEVPYSTQVWVESHKERDGVKKDLILAKIFCERKS 237
Query: 351 QKIILIGK 358
Q ILIGK
Sbjct: 238 QMGILIGK 245
>gi|268315826|ref|YP_003289545.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252]
gi|262333360|gb|ACY47157.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252]
Length = 311
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 172/250 (68%), Gaps = 9/250 (3%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P H+SGYVA++GKPNVGKSTL N ++G KLSIVT KPQTTRHR+LGI SG YQ++ DT
Sbjct: 21 PEHRSGYVAIVGKPNVGKSTLMNALLGHKLSIVTPKPQTTRHRVLGILSGDTYQIVFLDT 80
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC-KAPERIDEILEEGVGDHKDKLPI 229
PG+++K + L M++ V A +AD ++ + +A KAP+ I +G H P
Sbjct: 81 PGVLKKARYKLHEHMLRTVDRAVADADLVLFMAEATQKAPDTI------SLG-HLGNRPA 133
Query: 230 LLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+L LNK DL++ E + ++ Y K + V+P+SA G+ ++ + I+ +LP GP +
Sbjct: 134 ILALNKMDLVRNQEQVLPLVDAYMKQYPFEAVVPISALTGYNLDVLLKEIIHRLPPGPPF 193
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YPKD +SEHPERFFV EIIREKIF Q+R E+PYA QVN+V YK RP KDFI EI+VE+
Sbjct: 194 YPKDQLSEHPERFFVAEIIREKIFEQFREEIPYAAQVNIVDYKERPEGKDFIDAEIIVER 253
Query: 349 NSQKIILIGK 358
+QK ILIGK
Sbjct: 254 PTQKAILIGK 263
>gi|308811126|ref|XP_003082871.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116054749|emb|CAL56826.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 413
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/258 (49%), Positives = 179/258 (69%), Gaps = 7/258 (2%)
Query: 104 EFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY 163
E A P HKSGYVA++G+PN GKSTL N ++G KLSIVT KPQTTRHRILGI S Y
Sbjct: 101 ELLKADPPGHKSGYVAIVGRPNAGKSTLMNDLVGTKLSIVTFKPQTTRHRILGIVSEDAY 160
Query: 164 QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH 223
QM+L DTPG++ ++ + LD +M+K+VR++ NAD + +VDA + P EG+
Sbjct: 161 QMVLLDTPGVMVEEFNKLDGIMLKSVRNSMANADVMFYIVDAARDPYGA----WEGLAPK 216
Query: 224 KDK-LPILLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
K K +P L+LNK DL+ E I + ++++ +D+V+P+SA GVE++++W L +
Sbjct: 217 KGKRVPTALILNKCDLVGDRERIMELIDYFRAQDGIDDVLPISALNSTGVENVKNWALDR 276
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFI 340
LPLGP YPK+ +SEHPERFF+ EIIREKIF+QY+ EVPY+ QV + ++K R A KD I
Sbjct: 277 LPLGPTLYPKEAISEHPERFFIAEIIREKIFLQYKQEVPYSTQVWIEAHKERDGAKKDLI 336
Query: 341 QVEIVVEKNSQKIILIGK 358
++ VE+ SQ I++G+
Sbjct: 337 LAKVYVERQSQIGIIVGQ 354
>gi|345302117|ref|YP_004824019.1| GTP-binding protein Era-like-protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345111350|gb|AEN72182.1| GTP-binding protein Era-like-protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 311
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 172/250 (68%), Gaps = 9/250 (3%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P H+SGYVA++GKPNVGKSTL N ++G KLSIVT KPQTTRHR+LGI SG YQ++ DT
Sbjct: 21 PEHRSGYVAIVGKPNVGKSTLMNALLGHKLSIVTPKPQTTRHRVLGILSGDTYQIVFLDT 80
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC-KAPERIDEILEEGVGDHKDKLPI 229
PG+++K + L M++ V A +AD ++ + +A KAP+ I +G H P
Sbjct: 81 PGVLKKARYKLHEHMLRTVDRAVADADLVLFMAEATQKAPDTI------SLG-HLGNRPA 133
Query: 230 LLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+L LNK DL++ E + ++ Y K + V+P+SA G+ ++ + ++ +LP GP +
Sbjct: 134 ILALNKMDLVRNQEQVLPLVDAYMKQYPFEAVVPISALTGYNLDVLLKELIHRLPPGPPF 193
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YPKD +SEHPERFFV EIIREKIF Q+R E+PYA QVN+V YK RP KDFI EI+VE+
Sbjct: 194 YPKDQLSEHPERFFVAEIIREKIFEQFREEIPYAAQVNIVDYKERPEGKDFIDAEIIVER 253
Query: 349 NSQKIILIGK 358
+QK ILIGK
Sbjct: 254 PTQKAILIGK 263
>gi|145356544|ref|XP_001422488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582731|gb|ABP00805.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 173/251 (68%), Gaps = 7/251 (2%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSGY A++G+PN GKSTL N ++G KLSIVT KPQTTRHRILGI S QM+L DT
Sbjct: 46 PGHKSGYAAIVGRPNAGKSTLMNDLVGTKLSIVTYKPQTTRHRILGILSDENSQMVLLDT 105
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPI 229
PG++ ++ + LD MM+K+VR++ NAD + +VDA + P EG+ K K +P
Sbjct: 106 PGVMVEEFNKLDGMMLKSVRNSMANADVLFYIVDAARDPYGA----WEGLAPKKGKRVPT 161
Query: 230 LLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
L+LNK D++ E I + +E+++ +DEV+P+SA G ++++W L +LPLGP
Sbjct: 162 ALILNKCDMVGDRERIMELIEYFQAQEAIDEVLPISALNSTGTRNVKEWALERLPLGPTL 221
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVE 347
YPKD +SEHPERFF+ EIIREKIF+QY+ EVPY+ QV + ++K R KD I ++ VE
Sbjct: 222 YPKDAISEHPERFFIAEIIREKIFLQYKQEVPYSTQVWIETHKERDGVKKDLILAKVFVE 281
Query: 348 KNSQKIILIGK 358
+ SQ I++G+
Sbjct: 282 RQSQIGIIVGQ 292
>gi|303288864|ref|XP_003063720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454788|gb|EEH52093.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 292
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 172/248 (69%), Gaps = 7/248 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SGYVA++G+PN GKST N ++G KLSIVT KPQTTRHRILG+ S ++QM+L DTPG
Sbjct: 1 HRSGYVAIVGRPNAGKSTFMNALVGTKLSIVTYKPQTTRHRILGLVSEDDFQMVLLDTPG 60
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEIL--EEGVGDHKDKLPIL 230
++ ++ + LD MM+K+VR+A NAD ++ +VDA + P E L E GD D P+
Sbjct: 61 VMREEFNKLDEMMLKSVRNAMANADVLLAIVDARRDPLGNFEGLLPERRPGD--DPAPLG 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+++NK DL+ EI +K +E + V+ V PVSA G G + ++ W ++KLP+GP YP
Sbjct: 119 IIINKCDLLGVDEIRRKT--FESYPGVERVFPVSALAGVGHDAVQRWAVSKLPVGPTLYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKN 349
KD +SEHPERFF+ EIIREKIF+QY EVPY+ QV V S+K R KD + ++ VE+
Sbjct: 177 KDAISEHPERFFIAEIIREKIFLQYAKEVPYSAQVWVSSHKERDGIKKDLVIAKVYVERK 236
Query: 350 SQKIILIG 357
SQ I+IG
Sbjct: 237 SQMGIIIG 244
>gi|307109793|gb|EFN58030.1| hypothetical protein CHLNCDRAFT_20741 [Chlorella variabilis]
Length = 306
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 168/251 (66%), Gaps = 3/251 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P +G+VA++G+PN GKSTL N ++ QKLSIVT K QTTRHRILGI S P +Q + DT
Sbjct: 12 PLPNAGFVAIIGRPNAGKSTLMNALLQQKLSIVTPKAQTTRHRILGILSEPGFQAVFLDT 71
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGII K + L+ MM +V+ A +ADC++ +VDA P++ +++ G D P+
Sbjct: 72 PGIIVDKRNKLEDKMMASVQQAVRDADCLLAIVDASHEPQQALAMIQPG--DDWKGPPMA 129
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
++LNK DL+ E+ WY ++ D V+P+SA ++ + +W++ KLP GP+ YP
Sbjct: 130 VLLNKTDLVPAEELEALEAWYRQYCKADAVLPISALESSNLDAVVEWLVGKLPEGPSLYP 189
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AKDFIQVEIVVEKN 349
KDIVSE PERFFV EIIR+ IF+QY+ EVPY+ V VV+YK R T KD I+ EIV+EK
Sbjct: 190 KDIVSEQPERFFVSEIIRKHIFLQYQQEVPYSVAVEVVNYKERHTRGKDLIEAEIVLEKE 249
Query: 350 SQKIILIGKVS 360
QK I+IG+
Sbjct: 250 RQKGIIIGRAG 260
>gi|384251856|gb|EIE25333.1| GTP-binding protein Era [Coccomyxa subellipsoidea C-169]
Length = 299
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 165/249 (66%), Gaps = 7/249 (2%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI- 173
+G+VA++GKPN GKSTL N ++GQKLSIVT K QTTRHRI+G+ S +Q+I DTPG+
Sbjct: 5 AGFVAIIGKPNAGKSTLLNGILGQKLSIVTPKAQTTRHRIIGLHSEESFQIIFLDTPGVL 64
Query: 174 ----IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
I + ++MLD MM+NVR A +AD ++ +VD E +L K +P+
Sbjct: 65 REPSIAEPLNMLDQRMMQNVRQATKDADAVLAIVDGNDRAEEALPLLAPYC--RKGSVPL 122
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+VLNK DL+ + + +E++E +D VIPVSA G ++D+ +W ++ LP GPA Y
Sbjct: 123 AVVLNKVDLLTALRLRQLVEYFELQPGIDAVIPVSALKGRNLKDVEEWAVSHLPEGPALY 182
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
PKD VS+HPERFFVGEI+REKIF YR E+PY V V+ YK R KD +QV + VE
Sbjct: 183 PKDAVSDHPERFFVGEIVREKIFQLYREEIPYCSTVQVLDYKERAVGKDLVQVAVYVEHE 242
Query: 350 SQKIILIGK 358
SQK I++G+
Sbjct: 243 SQKGIMVGR 251
>gi|83815627|ref|YP_446187.1| GTP-binding protein Era [Salinibacter ruber DSM 13855]
gi|294508113|ref|YP_003572171.1| GTP-binding protein [Salinibacter ruber M8]
gi|83757021|gb|ABC45134.1| GTP-binding protein Era [Salinibacter ruber DSM 13855]
gi|294344441|emb|CBH25219.1| GTP-binding protein [Salinibacter ruber M8]
Length = 304
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/248 (51%), Positives = 165/248 (66%), Gaps = 8/248 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+H SGYVA++GKPNVGKSTL N ++G+KLSIVT KPQTTRHR+LGI SGPE+Q I DTP
Sbjct: 14 DHTSGYVAIVGKPNVGKSTLMNALLGEKLSIVTKKPQTTRHRVLGIHSGPEHQAIFLDTP 73
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GIIE + + L MM V+ A +AD ++ L +A + + D + +GD P L
Sbjct: 74 GIIEPR-YALHETMMGQVQGAIRDADLLLFLHEATQ--DEPDTQSLKKIGD----TPAFL 126
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
VL K DLI E +E YE DEV+P SAK G ++ + +L LP GP +YPK
Sbjct: 127 VLTKMDLIPKEETLPLVESYEDRRAFDEVVPTSAKEGFNLQTLLHLVLDTLPEGPPFYPK 186
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFIQVEIVVEKNS 350
D +SEHPERFFV E+IREK++ Y E+PY+ QVNVV+Y+ RP KD+I EIVV + S
Sbjct: 187 DRISEHPERFFVAEMIREKVYKHYHQEIPYSVQVNVVAYEERPEGTKDYIDAEIVVMEES 246
Query: 351 QKIILIGK 358
K ILIG+
Sbjct: 247 HKGILIGE 254
>gi|302841942|ref|XP_002952515.1| Era-like protein [Volvox carteri f. nagariensis]
gi|300262154|gb|EFJ46362.1| Era-like protein [Volvox carteri f. nagariensis]
Length = 453
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P H+SGYVAV+GKPN GKSTL N ++GQKLSIVT KPQTTRHRI+GI S YQMIL+DT
Sbjct: 153 PGHRSGYVAVIGKPNAGKSTLINALVGQKLSIVTYKPQTTRHRIMGIASDKHYQMILFDT 212
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PG+IE+K L+ MM V + +++ IV +VD+ P+ + + G+ + P+
Sbjct: 213 PGVIERKRTKLEERMMAAVVHSIKDSEAIVAVVDSADKPKEALAMFQP--GESWNGPPMA 270
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
++LNK DL+ EI + WY + ++V SA+ G+E +R+W +++LP GP Y
Sbjct: 271 VLLNKADLLTEDEIQELKTWYTENCRAEQVFVGSAERRDGLEALREWAVSRLPEGPTLYS 330
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFIQVEIVVEKN 349
K IVSE PERFFV E IRE++F+ + EVPY QV + + R KDFI EIVVEK
Sbjct: 331 KKIVSEQPERFFVAECIREQVFLHCQQEVPYCSQVLIKEFTERRGGLKDFISAEIVVEKE 390
Query: 350 SQKIILIG 357
SQK ILIG
Sbjct: 391 SQKGILIG 398
>gi|412991355|emb|CCO16200.1| GTP-binding protein Era [Bathycoccus prasinos]
Length = 381
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 165/249 (66%), Gaps = 4/249 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
H SGYVA++G+PN GKSTL N+++G KLSIVT KPQTTRHRILG+ S E QM+L DTP
Sbjct: 72 THTSGYVAIVGRPNAGKSTLLNKILGTKLSIVTKKPQTTRHRILGVLSDEESQMVLLDTP 131
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG-DHKDKLPIL 230
G++ + LD M+K+VRS+ ADC+++++D A E ++ E + D K+P
Sbjct: 132 GVMRSAFNKLDETMLKSVRSSVKTADCLIIVIDG-DAKETAEKDFENLLDVDVIGKVPTA 190
Query: 231 LVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+ +NK D IK + K+L +++ + V EVIP+SA GV+++ W KLP+GP+Y+
Sbjct: 191 VCVNKCDRIKDVQRIKELMKYFRQVEGVSEVIPISALNDTGVKEVVQWAKGKLPVGPSYF 250
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEK 348
K+ +SEHPERFFV EIIREKIF Y EVPY V V K R P AKD I+ I VE+
Sbjct: 251 SKEYLSEHPERFFVAEIIREKIFELYSQEVPYCSSVWVEELKERKPPAKDLIRATIYVER 310
Query: 349 NSQKIILIG 357
SQ I++G
Sbjct: 311 QSQVGIVVG 319
>gi|373458094|ref|ZP_09549861.1| GTP-binding protein Era-like-protein [Caldithrix abyssi DSM 13497]
gi|371719758|gb|EHO41529.1| GTP-binding protein Era-like-protein [Caldithrix abyssi DSM 13497]
Length = 299
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 164/247 (66%), Gaps = 4/247 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSGYVA++G PN GKSTL N ++ KLSI++ KPQTTR R+LGI + EYQ++ DTP
Sbjct: 9 NFKSGYVAIIGLPNAGKSTLLNALLNIKLSIISAKPQTTRRRVLGILNKAEYQVVFIDTP 68
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ K + L + MM+ V +A +AD + ++VDA + ++ LE + K P LL
Sbjct: 69 GIIKPK-YKLHTRMMEQVHTALQDADLLALIVDATEHKHPVEVDLE---AMNPKKKPALL 124
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DLI ++ ++ Y +F +E+IP+SA GV+ + I+ +LP P +YP
Sbjct: 125 LLNKVDLINKQDLLPLIDQYREFYPFEEIIPISALKRDGVDQVEQEIVKRLPQHPPFYPP 184
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D++S+ PERFFV EIIREKIF ++ EVPY+ +V V +K RP +KD+I I VE+ SQ
Sbjct: 185 DVLSDQPERFFVAEIIREKIFERFFQEVPYSTEVVVEEFKERPGSKDYIYAIIYVERPSQ 244
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 245 KGIIIGK 251
>gi|124008575|ref|ZP_01693267.1| GTP-binding protein Era [Microscilla marina ATCC 23134]
gi|123985949|gb|EAY25806.1| GTP-binding protein Era [Microscilla marina ATCC 23134]
Length = 302
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 171/258 (66%), Gaps = 6/258 (2%)
Query: 101 EIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSG 160
E EE+ NH +G+V+++GKPNVGKSTL NQ+IG+KLSI+T+K QTTRHRI+G+ +G
Sbjct: 2 ENEEWLIPEDDNHHAGFVSIIGKPNVGKSTLMNQVIGEKLSIITSKAQTTRHRIMGVING 61
Query: 161 PEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV 220
++Q++ DTPGII+ K + L MM+ V ++ +AD I+ + D + + D I + +
Sbjct: 62 DDFQIVYSDTPGIIKPK-YELHKSMMRFVNTSLDDADVILFVTDIFEKHDENDVIEKLKI 120
Query: 221 GDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILT 280
+ P++L++NK DL K ++ +K+ ++++ E+IP+SA ++ + + IL
Sbjct: 121 SE----APVILLVNKIDLAKDNQVEEKITYWKELIQPSEIIPISALNNINIDKLFESILK 176
Query: 281 KLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFI 340
LP P Y+PKD ++ PERFF E+IREKIF Y+ E+PYAC+V + +K + + I
Sbjct: 177 ALPKHPPYFPKDTFTDKPERFFAAEMIREKIFKNYKQEIPYACEVMITEFKEKEEIIN-I 235
Query: 341 QVEIVVEKNSQKIILIGK 358
+ EI+VE+ SQK ILIGK
Sbjct: 236 RAEILVERQSQKGILIGK 253
>gi|392969405|ref|ZP_10334820.1| GTP-binding protein Era [Fibrisoma limi BUZ 3]
gi|387841599|emb|CCH56878.1| GTP-binding protein Era [Fibrisoma limi BUZ 3]
Length = 310
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 174/252 (69%), Gaps = 10/252 (3%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSG----PEYQMI 166
P+HK+G+V+++GKPNVGKSTL NQ++G++LSI+T+K QTTRHRI+GI +G E+Q++
Sbjct: 15 PDHKAGFVSIVGKPNVGKSTLMNQLVGERLSIITSKAQTTRHRIMGILNGMHNGQEFQLV 74
Query: 167 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 226
DTPGII+ + + +SMM VR + +AD ++ + D + + D ++E + +
Sbjct: 75 YSDTPGIIKPQYKLHESMM-SFVRGSLEDADVVLFVTDIFEQHDEND-VIERL---QRTE 129
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
PILL++NK DL ++++K+ ++++ E+IP+SA ++ + + I+++LP P
Sbjct: 130 TPILLLINKVDLATQEQVSEKIAYWQEHFKAQEIIPISALNAFNIDKLFEGIVSRLPQHP 189
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
Y+PKD +++ PERFF EIIREKIF+ Y+ EVPY+C+V + S+K + IQ EI+V
Sbjct: 190 PYFPKDELTDKPERFFASEIIREKIFLNYKKEVPYSCEVVITSFKDKDDII-VIQSEILV 248
Query: 347 EKNSQKIILIGK 358
E+ +Q+ IL+G+
Sbjct: 249 ERTTQRAILLGE 260
>gi|385810840|ref|YP_005847236.1| GTP-binding protein Era [Ignavibacterium album JCM 16511]
gi|383802888|gb|AFH49968.1| GTP-binding protein Era [Ignavibacterium album JCM 16511]
Length = 301
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 161/251 (64%), Gaps = 7/251 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK GYV+++G PNVGKSTL N ++ QK+SIVT KPQTTR +ILGI + YQ+I DTP
Sbjct: 2 SHKVGYVSIIGLPNVGKSTLLNAILKQKISIVTPKPQTTRKKILGILTENNYQIIFLDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE----EGVGDHKDKL 227
GI+ + ++L M++ + + +AD +V+L D RI E E + + + K K
Sbjct: 62 GIV-RPAYLLHEKMLEEINESIKDADVLVLLFDVSNES-RIKESEENEIIKNLIEQKTK- 118
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
PI+L LNK D I + + + YE F + V+P++A VE + I++ L G
Sbjct: 119 PIILALNKVDSITQEQAQQLVNHYESFNNFKAVVPIAASSNFNVERLIQEIVSLLSEGEK 178
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
+YP DI+SE ERFFV EIIREKIF Y +E+PY+ +V +V +K R T KDFI EI+VE
Sbjct: 179 FYPDDIISEASERFFVSEIIREKIFELYEDEIPYSTEVIIVEFKERTTGKDFISAEIIVE 238
Query: 348 KNSQKIILIGK 358
++SQK I+IGK
Sbjct: 239 RDSQKPIIIGK 249
>gi|312131517|ref|YP_003998857.1| GTP-binding protein era [Leadbetterella byssophila DSM 17132]
gi|311908063|gb|ADQ18504.1| GTP-binding protein Era [Leadbetterella byssophila DSM 17132]
Length = 295
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 173/253 (68%), Gaps = 16/253 (6%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSG--PEY--QMIL 167
+H++G+++++GKPNVGKSTL NQ++G+KLSI+T+K QTTRHRI+GI +G PE+ QM+
Sbjct: 3 DHRAGFISIVGKPNVGKSTLMNQLVGEKLSIITSKAQTTRHRIMGIVNGETPEFDFQMVY 62
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPGII K ++ L MM+ V + + D I+ + D E+ DE E+ + K+
Sbjct: 63 SDTPGII-KPVYELHKSMMEFVHGSIEDGDVILFVTDIY---EKYDE--EDVIERLKNAT 116
Query: 228 -PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
PI+L++NK DL KP +I +K++ ++ E++ +SA G GV + D IL LP+ P
Sbjct: 117 SPIILIINKIDLAKPEDIEEKIQHWKAVFQPTEILTLSALQGEGVPQLMDRILHYLPVHP 176
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EI 344
Y+PKD +++ PERFF E+IREKIF+ Y+ EVPY+C+V + ++K + D I++ EI
Sbjct: 177 PYFPKDELTDKPERFFAAEMIREKIFLNYKKEVPYSCEVVITAFK---ESDDLIRISSEI 233
Query: 345 VVEKNSQKIILIG 357
VE+++Q+ IL+G
Sbjct: 234 YVERSTQRAILLG 246
>gi|291515778|emb|CBK64988.1| GTP-binding protein Era [Alistipes shahii WAL 8301]
Length = 293
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 155/245 (63%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG+V ++G PNVGKSTL N ++G+KLSI+T+K QTTRHRI+GI SG ++Q++ DTPG
Sbjct: 2 HRSGFVNIIGNPNVGKSTLMNALVGEKLSIITSKAQTTRHRIMGIVSGEDFQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I+ K + L MMK V A +AD I+ + D + ER EI++ + +P ++V
Sbjct: 62 IL-KPSYKLQESMMKFVTGALTDADVILYVTDTVEQSERSAEIVD---SIRRSGIPTVVV 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL P + ++ ++ +V+P SAK +E + IL+ LP GPA+YPKD
Sbjct: 118 INKIDLSTPEALEALVDKWQAEIPGAQVVPTSAKENFNIEGLFRTILSLLPEGPAFYPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ RFF EIIREKI Y E+PY C++ + SYK PT D I I V ++SQK
Sbjct: 178 TLTDKTLRFFASEIIREKILKFYDKEIPYCCEIEIESYKEEPTI-DRIAATIYVARDSQK 236
Query: 353 IILIG 357
ILIG
Sbjct: 237 GILIG 241
>gi|284040066|ref|YP_003389996.1| GTP-binding protein Era [Spirosoma linguale DSM 74]
gi|283819359|gb|ADB41197.1| GTP-binding protein Era [Spirosoma linguale DSM 74]
Length = 306
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 168/251 (66%), Gaps = 10/251 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP----EYQMIL 167
+HK+G+V+++GKPNVGKSTL NQ++G++LSI+T K QTTRHRI+GI +G E+Q++
Sbjct: 12 DHKAGFVSIVGKPNVGKSTLMNQLVGERLSIITAKAQTTRHRIMGILNGTHDGTEFQLVY 71
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPGII K ++ L MM VR + +AD ++ + D + + D ++E K ++
Sbjct: 72 SDTPGII-KPLYKLHESMMSFVRGSIEDADVVLFVTDIFEQHDEND-VIERL---QKSEV 126
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P+LL++NK D ++ +K+ ++E+ E+IP+SA V+ + + I+++LP P
Sbjct: 127 PVLLLINKVDQATQDQVVEKIAYWEERFKATEIIPISALNDFNVDRVFEGIISRLPQHPP 186
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
Y+PKD +++ PERFF EIIREKIF+ Y+ EVPY+ +V V +K + IQ EI+VE
Sbjct: 187 YFPKDELTDKPERFFASEIIREKIFLNYKKEVPYSSEVVVTGFKEKDDII-VIQAEILVE 245
Query: 348 KNSQKIILIGK 358
+ +Q+ IL+G+
Sbjct: 246 RATQRAILLGE 256
>gi|371777228|ref|ZP_09483550.1| GTPase Era [Anaerophaga sp. HS1]
Length = 293
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 168/245 (68%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL+NQ+IG++LSI+T+K QTTRHRI GI + +YQ+I DTPG
Sbjct: 3 HKAGFVNIVGNPNVGKSTLSNQLIGERLSIITSKAQTTRHRIFGIVNTEDYQIIFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ K + +SM+ + +SA I+AD ++ + D + P++ DE L + K+PILL
Sbjct: 63 VLKPKYKLQESMLQFS-KSALIDADILLYITDTIEQPDKNDEFLNLV---KRAKVPILLA 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DLI ++ +++E+++K E+ P+SA + ++++ + IL LP P Y+ KD
Sbjct: 119 INKIDLINQQKLEERVEYWQKELPHAEIFPISALHNFNLKNLYNRILDLLPESPPYFDKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV EIIREKI + Y+ E+PY+ +V V YK P ++ I+ I V ++SQK
Sbjct: 179 ALTDKPERFFVSEIIREKILLNYQKEIPYSVEVEVEEYKEGP-ERNHIRCVIHVTRDSQK 237
Query: 353 IILIG 357
I+IG
Sbjct: 238 GIIIG 242
>gi|441501603|ref|ZP_20983693.1| GTP-binding protein Era [Fulvivirga imtechensis AK7]
gi|441434626|gb|ELR68080.1| GTP-binding protein Era [Fulvivirga imtechensis AK7]
Length = 293
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 165/252 (65%), Gaps = 11/252 (4%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S HK+G+V+++GKPNVGKSTL NQ++G++LSI+T+K QTTRHRI+GI SG +Q+I
Sbjct: 2 SGTAHKAGFVSIIGKPNVGKSTLMNQLVGERLSIITSKAQTTRHRIMGIISGENFQIIYS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL- 227
DTPGII+ + + +S MMK V + +AD ++ + D I E +E + DH ++
Sbjct: 62 DTPGIIKPEYELHNS-MMKFVSHSLEDADVVLFITD-------IYEKFDESLSDHLRRID 113
Query: 228 -PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
PI+ +LNK D K + K+ ++++ + + +SA G G+ ++ I+ +P P
Sbjct: 114 APIIFILNKVDQAKGTQAEDKITYWKEHVKAERYLAISALEGLGIAELFASIVDLMPEHP 173
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
AY+PKD +++ PE+FFV EIIREKIF+ Y+ EVPY+ +V V +K T I+ EI V
Sbjct: 174 AYFPKDELTDKPEKFFVEEIIREKIFLNYKKEVPYSTEVVVTEFKEDETIIR-IRAEIYV 232
Query: 347 EKNSQKIILIGK 358
E+ SQK I+IGK
Sbjct: 233 ERKSQKGIIIGK 244
>gi|406670953|ref|ZP_11078198.1| GTP-binding protein Era [Facklamia hominis CCUG 36813]
gi|405582469|gb|EKB56475.1| GTP-binding protein Era [Facklamia hominis CCUG 36813]
Length = 306
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 162/248 (65%), Gaps = 3/248 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+P++ SG+VA++G+PNVGKSTL NQ++GQK++I+++K QTTR+RI G+ + + Q++ D
Sbjct: 8 YPDYHSGFVALVGRPNVGKSTLLNQIVGQKIAIMSDKAQTTRNRIQGVYTREQAQIVFID 67
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI + K H L M+K SA D I VLV+A + D+ + + V + K+P+
Sbjct: 68 TPGIHKPK-HELGEFMVKTAYSALNGVDAICVLVNASEKMGPGDQFVIDKV--REAKVPV 124
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK DLI P ++ +E Y+ + + VIP+SAK G ++ + D ++ K+P GP YY
Sbjct: 125 FLVVNKIDLIHPDDLLPLIESYQALFNFEAVIPISAKEGINIQALLDTLVAKMPNGPQYY 184
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D V +HPE F V E+IREKI + R E+P++ V V S + P K +Q I+VE+
Sbjct: 185 PADQVMDHPEYFVVSELIREKILLLTREEIPHSVAVQVHSMQRNPDDKVEVQASIIVERK 244
Query: 350 SQKIILIG 357
SQK I+IG
Sbjct: 245 SQKGIIIG 252
>gi|320353093|ref|YP_004194432.1| GTP-binding protein Era [Desulfobulbus propionicus DSM 2032]
gi|320121595|gb|ADW17141.1| GTP-binding protein Era [Desulfobulbus propionicus DSM 2032]
Length = 299
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 158/253 (62%), Gaps = 5/253 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG A++G PN GKSTL N ++GQK++IVT KPQTTR+RI+GI +G YQMIL DTPG
Sbjct: 6 HRSGVAAIIGPPNAGKSTLLNHLLGQKIAIVTPKPQTTRNRIMGIVTGTSYQMILLDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PIL 230
+ + M + M++ + AD I+ LVD E+ E E + +K+ P++
Sbjct: 66 LHAAREEM-NRQMVRVALESLAEADVILFLVDGADWAEKKREQRAEEFQGYLEKMTCPVV 124
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L LNK DL+ ++ ++WY + ++P+SA G G++ + D ++ +LP+GP YYP
Sbjct: 125 LALNKVDLLPSAQLLPVMDWYRRLYPFAAMVPISALRGTGIDTLTDELVARLPVGPQYYP 184
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
+DI ++ ERF EIIREKIF+ R+EVPY+ V + S++ IQ I+VE++S
Sbjct: 185 EDIPTDASERFIAAEIIREKIFLLTRDEVPYSTAVIIDSFEEGEPV--VIQATILVERSS 242
Query: 351 QKIILIGKVSPFL 363
QK IL+G+ L
Sbjct: 243 QKGILVGQKGSML 255
>gi|392397330|ref|YP_006433931.1| GTP-binding protein Era [Flexibacter litoralis DSM 6794]
gi|390528408|gb|AFM04138.1| GTP-binding protein Era [Flexibacter litoralis DSM 6794]
Length = 311
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 163/247 (65%), Gaps = 2/247 (0%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
NH++G+VA++GKPN GKSTL N ++G+KL+IVT+K QTTRHRI+GI + +YQ++ DTP
Sbjct: 18 NHQAGFVALVGKPNSGKSTLMNAVLGEKLAIVTHKAQTTRHRIMGILNNEDYQIVFSDTP 77
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L MM+ V + +AD I+++ ++ + D I + K K+P+++
Sbjct: 78 GIISPK-YELHEKMMRFVEKSLEDADVILLVTSLDESHDEEDAIQKLKKVLDKKKIPLIV 136
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DL+ I +K+ +++ + EV+P+SA G V ++ IL LP PAYY K
Sbjct: 137 LLNKSDLVNQEIIDEKIARWKEVLNPQEVLPLSALEGFDVNEVLQLILKYLPKHPAYYDK 196
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++++ PERFF EIIREKIF+ Y E+PY+ +V ++ +K P I EI VE+ SQ
Sbjct: 197 EMLTDRPERFFAAEIIREKIFLNYEQEIPYSTEVGILEFKDTPKILR-IHAEIHVERKSQ 255
Query: 352 KIILIGK 358
K ILIGK
Sbjct: 256 KGILIGK 262
>gi|167753498|ref|ZP_02425625.1| hypothetical protein ALIPUT_01772 [Alistipes putredinis DSM 17216]
gi|167658123|gb|EDS02253.1| ribosome biogenesis GTPase Era [Alistipes putredinis DSM 17216]
Length = 293
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 157/245 (64%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILG+ SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGVVSGEDFQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I+ K + L MMK V A +AD I+ + D + +R ++ILE+ + +P L V
Sbjct: 62 IL-KPSYKLQESMMKFVTGAVNDADVILYVTDTVEQSDRSNDILEK---IRQSDIPTLAV 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL P ++ + ++ ++ ++PVSA+ ++ + D IL +LP G A+Y KD
Sbjct: 118 INKIDLTTPEKLEELVDKWQALLPAATIVPVSARENFNIKGLFDLILERLPEGEAFYSKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ RFF EIIREKI Y E+PY C++ + +Y+ PT D I I V ++SQK
Sbjct: 178 TLTDKTLRFFASEIIREKILRNYDKEIPYCCEIAIEAYREEPTI-DRISAVIYVARDSQK 236
Query: 353 IILIG 357
ILIG
Sbjct: 237 GILIG 241
>gi|404403851|ref|ZP_10995435.1| GTPase Era [Alistipes sp. JC136]
Length = 293
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 155/245 (63%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRI+GI SG ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRIMGIVSGEDFQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I+ K + L MMK V A +AD I+ + D + +R EI+E ++ +P ++V
Sbjct: 62 IL-KPSYKLQESMMKFVTGAVTDADVILYVTDTVERSDRSAEIVER---INQSGIPTIVV 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL P + ++ ++ ++PVSAK VE + IL LP GPA+YPKD
Sbjct: 118 INKIDLSTPEALDALVDKWQAEIPGARIVPVSAKENFNVEGVFKIILELLPEGPAFYPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ RFF EIIREKI Y E+PY C++ + SYK P A D I I V ++SQK
Sbjct: 178 TLTDKTLRFFASEIIREKILKFYDKEIPYCCEIEIDSYKEEP-AIDRIAATIYVARDSQK 236
Query: 353 IILIG 357
ILIG
Sbjct: 237 GILIG 241
>gi|343085043|ref|YP_004774338.1| GTP-binding protein Era [Cyclobacterium marinum DSM 745]
gi|342353577|gb|AEL26107.1| GTP-binding protein Era-like-protein [Cyclobacterium marinum DSM
745]
Length = 296
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 170/252 (67%), Gaps = 11/252 (4%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S HK+G+V ++GKPNVGKSTL N ++G+KLSI+++K QTTRHRILGI + PEYQ++
Sbjct: 2 SENTHKAGFVNIIGKPNVGKSTLMNALLGEKLSIISSKAQTTRHRILGIMNEPEYQIVFS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE-GVGDHKDKL 227
DTPG+++ K + L MM V + +AD IV + D + E I++I+++ D +
Sbjct: 62 DTPGMLKPK-YELHKSMMGFVNLSLEDADVIVFVTDLFENDEEIEDIIKKINAAD----V 116
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P+LL++NK DL K ++A+ +++ + + D VIP+SA G ++ I IL +LP+ P
Sbjct: 117 PVLLIINKIDLNKEEKLAEVTQYWTEKINADIVIPISALEGFNLQKILQEILDRLPVHPP 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IV 345
+Y K+ +S+ PERFF EI+REKIF+QY+ E+PY+ +V + ++ ++ I++ I
Sbjct: 177 FYDKEELSDRPERFFASEIVREKIFIQYKKEIPYSTEVRIEDFE---ETENLIRMRAVIF 233
Query: 346 VEKNSQKIILIG 357
VE++SQK I+IG
Sbjct: 234 VERDSQKGIIIG 245
>gi|327403776|ref|YP_004344614.1| GTP-binding protein Era-like-protein [Fluviicola taffensis DSM
16823]
gi|327319284|gb|AEA43776.1| GTP-binding protein Era-like-protein [Fluviicola taffensis DSM
16823]
Length = 291
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 160/252 (63%), Gaps = 5/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HKS +V ++G PNVGKSTL N ++G+KLSIVT+K QTTRHRI G+ +G ++Q++ DTP
Sbjct: 2 SHKSAFVNIVGSPNVGKSTLMNGLVGEKLSIVTSKAQTTRHRIHGLVNGDDHQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G++ + L MM V S+ +AD ++ + D + E LE V K K+P+LL
Sbjct: 62 GVVNAS-YKLHEAMMSYVESSFKDADILLFITDMSENEMNHKETLERIV---KLKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DL ++ ++++++++ E+IP SA + + I D IL P GPAY+ K
Sbjct: 118 ILNKIDLADQTKLEERVQYWKEKVPNAEIIPTSALHKFNINVIWDRILQLAPEGPAYFDK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +S+ P RFFV E+IREKIF+ EVPYACQV + SY+ I+ I+VE++SQ
Sbjct: 178 DELSDRPVRFFVAEMIREKIFLHCDKEVPYACQVEIESYQEAENIT-HIRALIIVERDSQ 236
Query: 352 KIILIGKVSPFL 363
K ILIGK L
Sbjct: 237 KGILIGKKGDML 248
>gi|346226854|ref|ZP_08847996.1| GTPase Era [Anaerophaga thermohalophila DSM 12881]
Length = 293
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 164/245 (66%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL+N + G++LSI+T+K QTTRHRI GI + +YQ+I DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLSNHLTGERLSIITSKAQTTRHRIFGIVNTDDYQIIFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ K + L + M+ +SA +AD ++ + D ++P++ DE L+ K ++P+LLV
Sbjct: 63 VLKPK-YKLQASMLHFSKSALSDADILLYITDTVESPDKNDEFLQLV---KKTEVPVLLV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DLI ++ + +++++ E+ P+SA + + ++ D I+ LP+ P Y+ KD
Sbjct: 119 INKIDLIDQQKLEELVDYWKNELPGAEIFPISALHDFNIRNLYDRIVELLPVSPPYFDKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFF+ EIIREKI + Y+ E+PY+ +V V YK T D I+ I V ++SQK
Sbjct: 179 ALTDKPERFFISEIIREKILLNYQKEIPYSVEVEVDEYKEGATRND-IRCIIHVARDSQK 237
Query: 353 IILIG 357
I+IG
Sbjct: 238 GIIIG 242
>gi|260061761|ref|YP_003194841.1| GTP-binding protein Era [Robiginitalea biformata HTCC2501]
gi|88785893|gb|EAR17062.1| putative GTP-binding protein (cell growth-related) [Robiginitalea
biformata HTCC2501]
Length = 295
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 164/248 (66%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q++ DTPG
Sbjct: 4 HKAGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQIVFSDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM VR A ++AD ++ +V+ + + DE E + ++P+LL+
Sbjct: 64 II-KPAYGLQESMMDFVRLALVDADVLLYMVEVGEKGLK-DEAFAEKI--RSSQIPVLLL 119
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D G++ +++ W E+F + E+IP+SA GV ++ D IL LP P Y+PK
Sbjct: 120 INKIDTSDQGQLEEQVAFWTEQFPNA-EIIPISALERFGVPEVLDRILALLPEAPPYFPK 178
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFFV EIIREKI + Y+ E+PYA ++ ++ + I++ I+VE+
Sbjct: 179 DQLTDRPERFFVNEIIREKILLHYKKEIPYAVEIETERFE---ETDEIIRIGAVIMVERA 235
Query: 350 SQKIILIG 357
+QK ILIG
Sbjct: 236 TQKGILIG 243
>gi|330752120|emb|CBL87081.1| GTP-binding protein era homolog [uncultured Flavobacteriia
bacterium]
Length = 301
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 160/245 (65%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G +YQM+L DTPG
Sbjct: 11 HKSGFVTIVGNPNVGKSTLMNAWVGERLSIITSKAQTTRHRILGIINGDDYQMVLSDTPG 70
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+I K I+ + S MM V+ A +AD ++ +V+ + + E+ G K+P+LL+
Sbjct: 71 VI-KPIYEMQSSMMAFVKGALEDADILIYMVEIGEKEMKDAAFFEKIKG---SKIPLLLL 126
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + ++++ + EV P+SA G V+++ D+I+ KLP GPAYYPKD
Sbjct: 127 INKIDTADQETLMTTIAFWKEMLPMAEVFPISAITGFSVKEVLDYIIDKLPEGPAYYPKD 186
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IRE+I Y E+PY+ +V+ + I+ I+VE+++QK
Sbjct: 187 QLTDKPERFFVNEAIREQILQYYSKEIPYSVEVDTEDFFEEDKIIK-IRSVIMVERDTQK 245
Query: 353 IILIG 357
I+IG
Sbjct: 246 GIIIG 250
>gi|189502490|ref|YP_001958207.1| GTP-binding protein Era [Candidatus Amoebophilus asiaticus 5a2]
gi|226741166|sp|B3ETC6.1|ERA_AMOA5 RecName: Full=GTPase Era
gi|189497931|gb|ACE06478.1| hypothetical protein Aasi_1141 [Candidatus Amoebophilus asiaticus
5a2]
Length = 296
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 164/249 (65%), Gaps = 11/249 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H++G+V ++GKPNVGKSTL N+++G++LSI+T K QTTRH I GI S ++Q+I DTPG
Sbjct: 6 HQAGFVTIIGKPNVGKSTLMNRLVGERLSIITPKAQTTRHSICGIVSDTDFQIIFTDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA--CKAPERIDEILEEGVGDHKDKLPIL 230
I+ K + L MM ++ A ++ D ++ LVD + P ++++L +G ++P+L
Sbjct: 66 IL-KPAYELQESMMHMLQHALVDTDVLLWLVDIKEKEVPPIVEKVLAQG------RIPVL 118
Query: 231 LVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L++NK DLI E + L E++++ +V ++IP++A G +E + IL LP P +Y
Sbjct: 119 LLINKIDLIAGQEALESLVEYWKQKVNVAQIIPIAALQGFQIEQLLKHILVYLPAHPPFY 178
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
PKD++++ PERFFV EIIRE+I +Y+ E+PYA +V + +K + I I VEK
Sbjct: 179 PKDMLTDRPERFFVAEIIREQILYKYQQEIPYAVEVVIEEFKEEASLIR-ISAMIYVEKK 237
Query: 350 SQKIILIGK 358
SQK ILIGK
Sbjct: 238 SQKGILIGK 246
>gi|354582242|ref|ZP_09001144.1| GTP-binding protein Era [Paenibacillus lactis 154]
gi|353199641|gb|EHB65103.1| GTP-binding protein Era [Paenibacillus lactis 154]
Length = 300
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 157/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + P+ Q++ DTPGI
Sbjct: 7 KSGFVAIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTPDSQVVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M + + G + ++ LVDA + D + E + K K P++LV+
Sbjct: 67 HKRQSKLGDYMNQTALGTLG-EVEAVLFLVDASEGIGGGDRFIAEQLS--KIKTPVMLVM 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+P + +E Y K D E++P+SAK G V+ + D I LP GP YYP+D
Sbjct: 124 NKIDKIEPPALLPLIEEYRKLHDFAEIVPISAKLGSNVDTLLDQIQKYLPPGPQYYPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPE+F E+IREKI R EVP++ V + + +I I VE++SQK
Sbjct: 184 VTDHPEQFVCAELIREKILHMTREEVPHSIAVTIEDMRKEENGTVYISAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGALL 253
>gi|397690753|ref|YP_006528007.1| GTP-binding protein Era [Melioribacter roseus P3M]
gi|395812245|gb|AFN74994.1| GTP-binding protein Era [Melioribacter roseus P3M]
Length = 303
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 159/246 (64%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
K+G+V+++GKPNVGKSTL N +IG+KLSI NKPQTTR +I+GI S YQ+I DTPGI
Sbjct: 4 KAGFVSIIGKPNVGKSTLMNALIGEKLSITANKPQTTRKKIIGILSDENYQIIFQDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-KDK-LPILL 231
+ + +++ M + + A +AD ++ ++D P + +E V + KDK + +L
Sbjct: 64 LNPE-YLMQERMYEYITEAVKDADLLLFMIDISTDPTGQRTLSDERVYNLLKDKSIKKIL 122
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DL+ E+ + EK +++IP+SA + ++ + D IL LP P Y+P
Sbjct: 123 LINKVDLVSQNEVEALIRQLEKNDLFEKIIPISATANYNLQTVIDTILEYLPEHPKYFPD 182
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +S+ ERFFV EIIREKIF Y+ E+PY+ +V + +K R AKD+I+ IVVEK +Q
Sbjct: 183 DQLSDANERFFVSEIIREKIFEMYQEEIPYSTEVVIEEFKERENAKDYIRAVIVVEKETQ 242
Query: 352 KIILIG 357
K I+IG
Sbjct: 243 KPIIIG 248
>gi|418322682|ref|ZP_12933996.1| GTP-binding protein Era [Staphylococcus pettenkoferi VCU012]
gi|365231129|gb|EHM72188.1| GTP-binding protein Era [Staphylococcus pettenkoferi VCU012]
Length = 299
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 158/246 (64%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++KPQTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKPQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ R+ D I+ +V+ + R DE + E + H D P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVARNTLAEIDAIMFMVNINEEIGRGDEYIMEML-KHVDT-PVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P ++ K+E Y+ + D E++P+SA GH V+ + + + LP GP YYP D
Sbjct: 121 LNKIDLVHPDDLMPKIEQYQTYMDFTEIVPISALEGHNVDHFIEVLKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V E+IREKI E+P++ VNV ++ I+ I VE+NSQK
Sbjct: 181 QISDHPEQFVVSELIREKILHLTSEEIPHSIGVNVDRMIKESESRVRIEATIFVERNSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|253732220|ref|ZP_04866385.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|418599998|ref|ZP_13163472.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21343]
gi|253724009|gb|EES92738.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|374395587|gb|EHQ66850.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21343]
Length = 299
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIFVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|332666380|ref|YP_004449168.1| GTP-binding protein Era [Haliscomenobacter hydrossis DSM 1100]
gi|332335194|gb|AEE52295.1| GTP-binding protein Era-like-protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 298
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 160/250 (64%), Gaps = 6/250 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG++ ++G PNVGKSTL N ++G+++SI+TNKPQTTRHRI+GI SG ++QM+L DTPG
Sbjct: 2 HRSGFINIIGHPNVGKSTLMNALVGERMSIITNKPQTTRHRIIGILSGEDFQMVLSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++K + + M V+S +AD ++++ D + D +L + + ++P+ +V
Sbjct: 62 VVDKPAYKMHQAMNSFVQSTFEDADLMLLVTDVLETYPAEDHLLAQ--LRKQQEVPMFVV 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ ++A+ +++ + +IP+SA + + + + LP GP YYPKD
Sbjct: 120 LNKIDLVDEEKLAQLQQFWAEQLPQATLIPISALKKTNTDLLLNTLKENLPEGPEYYPKD 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT----AKDFIQVEIVVEK 348
+++ PERFF+ EIIREKI + Y E+PYA QV + +K T A I I VE+
Sbjct: 180 QLTDRPERFFMSEIIREKIMLLYHQEIPYATQVIIEDFKEDQTVGGKAIARISATIYVER 239
Query: 349 NSQKIILIGK 358
++QK ILIGK
Sbjct: 240 DTQKSILIGK 249
>gi|15924557|ref|NP_372091.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu50]
gi|15927147|ref|NP_374680.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus N315]
gi|21283248|ref|NP_646336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MW2]
gi|49483815|ref|YP_041039.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486402|ref|YP_043623.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651960|ref|YP_186464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL]
gi|87161238|ref|YP_494222.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|148268051|ref|YP_001246994.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9]
gi|150394119|ref|YP_001316794.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1]
gi|151221682|ref|YP_001332504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979885|ref|YP_001442144.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu3]
gi|161509795|ref|YP_001575454.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140013|ref|ZP_03564506.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253316042|ref|ZP_04839255.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253733183|ref|ZP_04867348.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006353|ref|ZP_05144954.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425692|ref|ZP_05602116.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428353|ref|ZP_05604751.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430990|ref|ZP_05607370.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
68-397]
gi|257433678|ref|ZP_05610036.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410]
gi|257436592|ref|ZP_05612636.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876]
gi|257793643|ref|ZP_05642622.1| GTP-binding protein Era [Staphylococcus aureus A9781]
gi|258411057|ref|ZP_05681337.1| GTP-binding protein Era [Staphylococcus aureus A9763]
gi|258420139|ref|ZP_05683094.1| GTP-binding protein Era [Staphylococcus aureus A9719]
gi|258423995|ref|ZP_05686877.1| GTP-binding protein Era [Staphylococcus aureus A9635]
gi|258437399|ref|ZP_05689383.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258443605|ref|ZP_05691944.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258446812|ref|ZP_05694966.1| GTP-binding protein Era [Staphylococcus aureus A6300]
gi|258448726|ref|ZP_05696838.1| GTP-binding protein Era [Staphylococcus aureus A6224]
gi|258450604|ref|ZP_05698666.1| GTP-binding protein Era [Staphylococcus aureus A5948]
gi|258453543|ref|ZP_05701521.1| GTP-binding protein Era [Staphylococcus aureus A5937]
gi|262051227|ref|ZP_06023451.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3]
gi|269203195|ref|YP_003282464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98]
gi|282893068|ref|ZP_06301302.1| GTP-binding protein Era [Staphylococcus aureus A8117]
gi|282904149|ref|ZP_06312037.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160]
gi|282905976|ref|ZP_06313831.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908886|ref|ZP_06316704.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911205|ref|ZP_06319007.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914374|ref|ZP_06322160.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899]
gi|282916837|ref|ZP_06324595.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139]
gi|282919343|ref|ZP_06327078.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427]
gi|282920116|ref|ZP_06327841.1| GTP-binding protein Era [Staphylococcus aureus A9765]
gi|282924668|ref|ZP_06332336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101]
gi|282928200|ref|ZP_06335805.1| GTP-binding protein Era [Staphylococcus aureus A10102]
gi|283958331|ref|ZP_06375782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503448|ref|ZP_06667295.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
58-424]
gi|293510465|ref|ZP_06669171.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809]
gi|293531005|ref|ZP_06671687.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015]
gi|294848598|ref|ZP_06789344.1| GTP-binding protein Era [Staphylococcus aureus A9754]
gi|295406690|ref|ZP_06816495.1| GTP-binding protein Era [Staphylococcus aureus A8819]
gi|295428145|ref|ZP_06820777.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275811|ref|ZP_06858318.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MR1]
gi|297207714|ref|ZP_06924149.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245728|ref|ZP_06929593.1| GTP-binding protein Era [Staphylococcus aureus A8796]
gi|297590889|ref|ZP_06949527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8]
gi|300911795|ref|ZP_07129238.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70]
gi|304380844|ref|ZP_07363504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379021349|ref|YP_005298011.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M013]
gi|384547800|ref|YP_005737053.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384550394|ref|YP_005739646.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384864788|ref|YP_005750147.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384867459|ref|YP_005747655.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH60]
gi|384870108|ref|YP_005752822.1| GTP-binding protein era -like protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781852|ref|YP_005758023.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
11819-97]
gi|386729268|ref|YP_006195651.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus 71193]
gi|386831177|ref|YP_006237831.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387150710|ref|YP_005742274.1| GTP-binding protein Era [Staphylococcus aureus 04-02981]
gi|387602907|ref|YP_005734428.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ST398]
gi|387780659|ref|YP_005755457.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|404478918|ref|YP_006710348.1| GTP-binding protein [Staphylococcus aureus 08BA02176]
gi|415682369|ref|ZP_11447685.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS00]
gi|415686245|ref|ZP_11450382.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS01]
gi|415692685|ref|ZP_11454605.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS03]
gi|416840036|ref|ZP_11903355.1| GTP-binding protein Era [Staphylococcus aureus O11]
gi|416845845|ref|ZP_11906246.1| GTP-binding protein Era [Staphylococcus aureus O46]
gi|417651227|ref|ZP_12300990.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21172]
gi|417797559|ref|ZP_12444755.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21305]
gi|417798965|ref|ZP_12446119.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21310]
gi|417801413|ref|ZP_12448505.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21318]
gi|417887890|ref|ZP_12532009.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21195]
gi|417890050|ref|ZP_12534129.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21200]
gi|417892426|ref|ZP_12536475.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21201]
gi|417897969|ref|ZP_12541895.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21259]
gi|417901150|ref|ZP_12545027.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21266]
gi|417905376|ref|ZP_12549187.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21269]
gi|418276922|ref|ZP_12891676.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21178]
gi|418285037|ref|ZP_12897737.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21209]
gi|418308256|ref|ZP_12919894.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21194]
gi|418309957|ref|ZP_12921507.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21331]
gi|418313209|ref|ZP_12924703.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21334]
gi|418316490|ref|ZP_12927928.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21340]
gi|418319447|ref|ZP_12930827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21232]
gi|418321275|ref|ZP_12932621.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
VCU006]
gi|418424716|ref|ZP_12997830.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS1]
gi|418427710|ref|ZP_13000715.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS2]
gi|418430552|ref|ZP_13003463.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433695|ref|ZP_13006287.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS4]
gi|418437190|ref|ZP_13008986.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS5]
gi|418440090|ref|ZP_13011791.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS6]
gi|418443108|ref|ZP_13014707.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS7]
gi|418446170|ref|ZP_13017644.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS8]
gi|418449184|ref|ZP_13020570.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS9]
gi|418451997|ref|ZP_13023331.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS10]
gi|418454991|ref|ZP_13026250.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457869|ref|ZP_13029068.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418558855|ref|ZP_13123402.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21252]
gi|418562370|ref|ZP_13126827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21262]
gi|418564841|ref|ZP_13129262.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21264]
gi|418569501|ref|ZP_13133827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21283]
gi|418574483|ref|ZP_13138652.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21333]
gi|418579492|ref|ZP_13143587.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418582494|ref|ZP_13146572.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597115|ref|ZP_13160648.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21342]
gi|418601032|ref|ZP_13164480.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21345]
gi|418640362|ref|ZP_13202594.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-3]
gi|418641908|ref|ZP_13204113.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-24]
gi|418648365|ref|ZP_13210409.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-88]
gi|418650550|ref|ZP_13212568.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-91]
gi|418652846|ref|ZP_13214809.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-99]
gi|418657645|ref|ZP_13219408.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-105]
gi|418659213|ref|ZP_13220901.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-111]
gi|418662171|ref|ZP_13223725.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-122]
gi|418873233|ref|ZP_13427543.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-125]
gi|418875507|ref|ZP_13429763.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418878485|ref|ZP_13432720.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881251|ref|ZP_13435468.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884099|ref|ZP_13438292.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886832|ref|ZP_13440980.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418889382|ref|ZP_13443515.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418892297|ref|ZP_13446410.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418895330|ref|ZP_13449425.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418898201|ref|ZP_13452271.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901072|ref|ZP_13455128.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418903874|ref|ZP_13457915.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418906512|ref|ZP_13460538.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418909419|ref|ZP_13463415.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG149]
gi|418912178|ref|ZP_13466159.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914669|ref|ZP_13468640.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418917464|ref|ZP_13471423.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418920648|ref|ZP_13474580.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418923249|ref|ZP_13477165.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418925827|ref|ZP_13479729.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928917|ref|ZP_13482803.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418931872|ref|ZP_13485707.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418934537|ref|ZP_13488359.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418946526|ref|ZP_13498949.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-157]
gi|418950580|ref|ZP_13502741.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-160]
gi|418955626|ref|ZP_13507563.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-189]
gi|418982573|ref|ZP_13530281.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986239|ref|ZP_13533924.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1500]
gi|418988634|ref|ZP_13536306.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418991495|ref|ZP_13539156.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418994293|ref|ZP_13541928.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG290]
gi|419773173|ref|ZP_14299184.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CO-23]
gi|419784712|ref|ZP_14310475.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-M]
gi|422742649|ref|ZP_16796652.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422746140|ref|ZP_16800073.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424768972|ref|ZP_18196209.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
CM05]
gi|424785402|ref|ZP_18212205.1| GTP-binding protein Era [Staphylococcus aureus CN79]
gi|440707444|ref|ZP_20888143.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21282]
gi|443637645|ref|ZP_21121717.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21236]
gi|448740606|ref|ZP_21722582.1| GTP-binding protein Era [Staphylococcus aureus KT/314250]
gi|448743083|ref|ZP_21724997.1| GTP-binding protein Era [Staphylococcus aureus KT/Y21]
gi|54037042|sp|P64085.1|ERA_STAAN RecName: Full=GTPase Era
gi|54037043|sp|P64086.1|ERA_STAAW RecName: Full=GTPase Era
gi|54040763|sp|P64084.1|ERA_STAAM RecName: Full=GTPase Era
gi|56748908|sp|Q6G900.1|ERA_STAAS RecName: Full=GTPase Era
gi|56748919|sp|Q6GGD3.1|ERA_STAAR RecName: Full=GTPase Era
gi|81694385|sp|Q5HFJ3.1|ERA_STAAC RecName: Full=GTPase Era
gi|123485633|sp|Q2FGF6.1|ERA_STAA3 RecName: Full=GTPase Era
gi|189037668|sp|A7X2W5.1|ERA_STAA1 RecName: Full=GTPase Era
gi|189037669|sp|A6U239.1|ERA_STAA2 RecName: Full=GTPase Era
gi|189037670|sp|A5IT95.1|ERA_STAA9 RecName: Full=GTPase Era
gi|189037671|sp|A6QHB0.1|ERA_STAAE RecName: Full=GTPase Era
gi|189037672|sp|A8Z4A6.1|ERA_STAAT RecName: Full=GTPase Era
gi|13701365|dbj|BAB42659.1| bex [Staphylococcus aureus subsp. aureus N315]
gi|14247338|dbj|BAB57729.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204688|dbj|BAB95384.1| bex [Staphylococcus aureus subsp. aureus MW2]
gi|49241944|emb|CAG40639.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244845|emb|CAG43306.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286146|gb|AAW38240.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL]
gi|87127212|gb|ABD21726.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|147741120|gb|ABQ49418.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9]
gi|149946571|gb|ABR52507.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1]
gi|150374482|dbj|BAF67742.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722020|dbj|BAF78437.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|160368604|gb|ABX29575.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253728723|gb|EES97452.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271386|gb|EEV03532.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275194|gb|EEV06681.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278420|gb|EEV09056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
68-397]
gi|257281771|gb|EEV11908.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410]
gi|257283943|gb|EEV14066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876]
gi|257787615|gb|EEV25955.1| GTP-binding protein Era [Staphylococcus aureus A9781]
gi|257840207|gb|EEV64671.1| GTP-binding protein Era [Staphylococcus aureus A9763]
gi|257843850|gb|EEV68244.1| GTP-binding protein Era [Staphylococcus aureus A9719]
gi|257845616|gb|EEV69648.1| GTP-binding protein Era [Staphylococcus aureus A9635]
gi|257848604|gb|EEV72592.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257851011|gb|EEV74954.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257854387|gb|EEV77336.1| GTP-binding protein Era [Staphylococcus aureus A6300]
gi|257858004|gb|EEV80893.1| GTP-binding protein Era [Staphylococcus aureus A6224]
gi|257861762|gb|EEV84561.1| GTP-binding protein Era [Staphylococcus aureus A5948]
gi|257864274|gb|EEV87024.1| GTP-binding protein Era [Staphylococcus aureus A5937]
gi|259160864|gb|EEW45884.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3]
gi|262075485|gb|ACY11458.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98]
gi|282313503|gb|EFB43898.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101]
gi|282317153|gb|EFB47527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427]
gi|282319324|gb|EFB49676.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139]
gi|282321555|gb|EFB51880.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899]
gi|282324900|gb|EFB55210.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327150|gb|EFB57445.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331268|gb|EFB60782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590007|gb|EFB95089.1| GTP-binding protein Era [Staphylococcus aureus A10102]
gi|282594464|gb|EFB99449.1| GTP-binding protein Era [Staphylococcus aureus A9765]
gi|282595767|gb|EFC00731.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160]
gi|282764386|gb|EFC04512.1| GTP-binding protein Era [Staphylococcus aureus A8117]
gi|283470845|emb|CAQ50056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ST398]
gi|283790480|gb|EFC29297.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285817249|gb|ADC37736.1| GTP-binding protein Era [Staphylococcus aureus 04-02981]
gi|290920273|gb|EFD97339.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015]
gi|291095114|gb|EFE25379.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
58-424]
gi|291466829|gb|EFF09349.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809]
gi|294824624|gb|EFG41047.1| GTP-binding protein Era [Staphylococcus aureus A9754]
gi|294968437|gb|EFG44461.1| GTP-binding protein Era [Staphylococcus aureus A8819]
gi|295128503|gb|EFG58137.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887731|gb|EFH26629.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177379|gb|EFH36631.1| GTP-binding protein Era [Staphylococcus aureus A8796]
gi|297575775|gb|EFH94491.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8]
gi|298694849|gb|ADI98071.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886041|gb|EFK81243.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70]
gi|302333243|gb|ADL23436.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
JKD6159]
gi|304340571|gb|EFM06505.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312437964|gb|ADQ77035.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH60]
gi|312829955|emb|CBX34797.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129845|gb|EFT85835.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS03]
gi|315195469|gb|EFU25856.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS00]
gi|315198738|gb|EFU29066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS01]
gi|320140548|gb|EFW32402.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144085|gb|EFW35854.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440465|gb|EGA98177.1| GTP-binding protein Era [Staphylococcus aureus O11]
gi|323443239|gb|EGB00857.1| GTP-binding protein Era [Staphylococcus aureus O46]
gi|329314243|gb|AEB88656.1| GTP-binding protein era -like protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329727411|gb|EGG63867.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21172]
gi|334267051|gb|EGL85521.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21305]
gi|334275127|gb|EGL93428.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21310]
gi|334276862|gb|EGL95108.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21318]
gi|341843652|gb|EGS84874.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21269]
gi|341846309|gb|EGS87506.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21266]
gi|341849471|gb|EGS90614.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21259]
gi|341855743|gb|EGS96587.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21200]
gi|341856919|gb|EGS97746.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21195]
gi|341857591|gb|EGS98403.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21201]
gi|344177761|emb|CCC88240.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|359830658|gb|AEV78636.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M013]
gi|364522841|gb|AEW65591.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
11819-97]
gi|365172048|gb|EHM62793.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21209]
gi|365173905|gb|EHM64334.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21178]
gi|365225507|gb|EHM66750.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
VCU006]
gi|365236480|gb|EHM77369.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21334]
gi|365237414|gb|EHM78260.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21331]
gi|365240447|gb|EHM81223.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21194]
gi|365240566|gb|EHM81338.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21232]
gi|365241174|gb|EHM81929.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21340]
gi|371973474|gb|EHO90822.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21262]
gi|371975978|gb|EHO93270.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21264]
gi|371976205|gb|EHO93495.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21252]
gi|371979210|gb|EHO96445.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21333]
gi|371985630|gb|EHP02691.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21283]
gi|374395351|gb|EHQ66618.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21342]
gi|374400279|gb|EHQ71398.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21345]
gi|375014926|gb|EHS08597.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-3]
gi|375018363|gb|EHS11943.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-24]
gi|375021014|gb|EHS14521.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-99]
gi|375026278|gb|EHS19661.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-88]
gi|375027836|gb|EHS21194.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-91]
gi|375030125|gb|EHS23449.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-105]
gi|375036211|gb|EHS29289.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-111]
gi|375037116|gb|EHS30170.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-122]
gi|375366424|gb|EHS70421.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-125]
gi|375370712|gb|EHS74510.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-189]
gi|375376683|gb|EHS80207.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-160]
gi|375377871|gb|EHS81308.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-157]
gi|377694607|gb|EHT18972.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695136|gb|EHT19500.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377697519|gb|EHT21874.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377702469|gb|EHT26791.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704283|gb|EHT28593.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704854|gb|EHT29163.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710904|gb|EHT35142.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377713050|gb|EHT37263.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377714434|gb|EHT38635.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377717727|gb|EHT41902.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377722435|gb|EHT46561.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG547]
gi|377723617|gb|EHT47742.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377725785|gb|EHT49898.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377730591|gb|EHT54658.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377730994|gb|EHT55052.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377735208|gb|EHT59244.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377738829|gb|EHT62838.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742889|gb|EHT66874.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744090|gb|EHT68068.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG290]
gi|377744896|gb|EHT68873.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377750638|gb|EHT74576.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377752066|gb|EHT75990.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG149]
gi|377752890|gb|EHT76808.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377756995|gb|EHT80891.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377761236|gb|EHT85112.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|377763417|gb|EHT87273.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764374|gb|EHT88227.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377769579|gb|EHT93347.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377770631|gb|EHT94392.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC128]
gi|383363922|gb|EID41248.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-M]
gi|383972997|gb|EID89018.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CO-23]
gi|384230561|gb|AFH69808.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus 71193]
gi|385196569|emb|CCG16198.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387717998|gb|EIK05993.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS2]
gi|387718292|gb|EIK06276.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719495|gb|EIK07440.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS1]
gi|387724919|gb|EIK12550.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS4]
gi|387727178|gb|EIK14710.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS5]
gi|387730240|gb|EIK17647.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS6]
gi|387735308|gb|EIK22437.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS8]
gi|387736784|gb|EIK23872.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS7]
gi|387736947|gb|EIK24033.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS9]
gi|387744878|gb|EIK31642.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS10]
gi|387745044|gb|EIK31806.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746637|gb|EIK33366.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348363|gb|EJU83355.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
CM05]
gi|404440407|gb|AFR73600.1| putative GTP-binding protein [Staphylococcus aureus 08BA02176]
gi|408423688|emb|CCJ11099.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408425678|emb|CCJ13065.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408427665|emb|CCJ15028.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408429654|emb|CCJ26819.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408431641|emb|CCJ18956.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408433635|emb|CCJ20920.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408435627|emb|CCJ22887.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408437611|emb|CCJ24854.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|421956812|gb|EKU09141.1| GTP-binding protein Era [Staphylococcus aureus CN79]
gi|436506200|gb|ELP42039.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21282]
gi|443405216|gb|ELS63824.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21236]
gi|445548573|gb|ELY16823.1| GTP-binding protein Era [Staphylococcus aureus KT/314250]
gi|445563770|gb|ELY19927.1| GTP-binding protein Era [Staphylococcus aureus KT/Y21]
Length = 299
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|418978290|ref|ZP_13526091.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus DR10]
gi|379993906|gb|EIA15351.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus DR10]
Length = 299
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEQIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|418645203|ref|ZP_13207331.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-55]
gi|421148553|ref|ZP_15608213.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443639997|ref|ZP_21123997.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21196]
gi|375024036|gb|EHS17481.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-55]
gi|394331696|gb|EJE57779.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443406272|gb|ELS64856.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21196]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQTYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|283770643|ref|ZP_06343535.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19]
gi|283460790|gb|EFC07880.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|386813446|ref|ZP_10100670.1| GTP-binding protein Era [planctomycete KSU-1]
gi|386402943|dbj|GAB63551.1| GTP-binding protein Era [planctomycete KSU-1]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 160/247 (64%), Gaps = 5/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSGYVA++GKPNVGKSTL N ++G KLSIVT KPQTTR +I+G+ + +YQ+I YDTP
Sbjct: 7 NFKSGYVAIIGKPNVGKSTLINDLLGCKLSIVTPKPQTTRKKIMGVLTKEDYQIIFYDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK-APERIDEILEEGVGDHKDKLPIL 230
GIIE + + L + M+K S + D I+++V+ CK + ++ E+L++ + P++
Sbjct: 67 GIIEPR-YELQTYMVKTAYSVIEDVDVILLMVEPCKPSTDKDREVLKKL---SQVNAPVI 122
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L +NK DL++ + + Y+ E++P+SA G ++ + I+ LP G +YP
Sbjct: 123 LAVNKVDLVEKDSLIPIISAYDAQLKFAEIVPISALKGVNIDLMLSLIVKYLPEGEPFYP 182
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
+D ++++ ERF EI+REKIF Y E+PY+ V + +K R KDFI+ I VE+NS
Sbjct: 183 EDYMTDYNERFLASEIVREKIFEFYGEEIPYSTTVEIEEFKEREAGKDFIRAIIYVERNS 242
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 243 QKGIIIG 249
>gi|417897108|ref|ZP_12541051.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21235]
gi|341840374|gb|EGS81894.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21235]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEML--ENVKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|417653468|ref|ZP_12303199.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21193]
gi|329733159|gb|EGG69496.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21193]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|293571622|ref|ZP_06682643.1| GTP-binding protein Era [Enterococcus faecium E980]
gi|291608292|gb|EFF37593.1| GTP-binding protein Era [Enterococcus faecium E980]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 161/253 (63%), Gaps = 3/253 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 239 QKGIVIGKGGKML 251
>gi|82751170|ref|YP_416911.1| GTP-binding protein Era [Staphylococcus aureus RF122]
gi|123547823|sp|Q2YT12.1|ERA_STAAB RecName: Full=GTPase Era
gi|82656701|emb|CAI81128.1| GTP-binding protein [Staphylococcus aureus RF122]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALDGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|418284070|ref|ZP_12896802.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21202]
gi|365164934|gb|EHM56764.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21202]
Length = 299
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELIPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|393201605|ref|YP_006463447.1| GTPase [Solibacillus silvestris StLB046]
gi|406664463|ref|ZP_11072238.1| Bex protein [Bacillus isronensis B3W22]
gi|327440936|dbj|BAK17301.1| GTPase [Solibacillus silvestris StLB046]
gi|405387311|gb|EKB46735.1| Bex protein [Bacillus isronensis B3W22]
Length = 304
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 163/253 (64%), Gaps = 5/253 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPG
Sbjct: 7 YKSGFVSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTQQNSQTIFIDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+K R+A D I+ +V+A +A + DE + E + +K P+ L+
Sbjct: 67 IHKPK-HKLGEFMLKTSRNALREVDVIMFMVNAEQAIGKGDEFIIELL--QGNKTPVFLI 123
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL+ P E+ K ++ Y+ D E+IP+SA G+ VE++ I LP GP YYP D
Sbjct: 124 INKIDLVHPDELVKIIDSYKDKFDFAEIIPISALQGNNVENLLSTIEKYLPEGPQYYPAD 183
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
V++HPERF + E+IREK+ R E+P++ V + K ++ I V+ I+VE++S
Sbjct: 184 QVTDHPERFIISELIREKVLHLTREEIPHSIAVVIERIKPHEEKENMIHVQATIMVERDS 243
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 244 QKGIVIGKRGALL 256
>gi|387143174|ref|YP_005731567.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
TW20]
gi|269941057|emb|CBI49441.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
TW20]
Length = 299
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKENEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|161353525|ref|YP_500179.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|379014775|ref|YP_005291011.1| GTPase Era [Staphylococcus aureus subsp. aureus VC40]
gi|417649235|ref|ZP_12299039.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21189]
gi|440735018|ref|ZP_20914629.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus DSM
20231]
gi|317374940|sp|Q2FY06.2|ERA_STAA8 RecName: Full=GTPase Era
gi|329728341|gb|EGG64778.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21189]
gi|374363472|gb|AEZ37577.1| GTPase Era [Staphylococcus aureus subsp. aureus VC40]
gi|436431113|gb|ELP28467.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus DSM
20231]
Length = 299
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE+ SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERGSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|294501286|ref|YP_003564986.1| GTP-binding protein Era [Bacillus megaterium QM B1551]
gi|295706633|ref|YP_003599708.1| GTP-binding protein Era [Bacillus megaterium DSM 319]
gi|384044868|ref|YP_005492885.1| GTP-binding protein era-like protein [Bacillus megaterium WSH-002]
gi|294351223|gb|ADE71552.1| GTP-binding protein Era [Bacillus megaterium QM B1551]
gi|294804292|gb|ADF41358.1| GTP-binding protein Era [Bacillus megaterium DSM 319]
gi|345442559|gb|AEN87576.1| GTP-binding protein era-like protein [Bacillus megaterium WSH-002]
Length = 301
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S+ KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++
Sbjct: 2 SNNEFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTEDQAQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + R DE + E + D K P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINATEGLGRGDEFIIERLKD--TKTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P E+ + Y+ E++P+SA G+ VE + D I +LP GP Y
Sbjct: 119 VFLVINKIDEIHPDELFSIITNYKDLYPFAEIVPISALQGNNVERLLDQIKQRLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S + R ++ I+VE+
Sbjct: 179 YPADQVTDHPERFIITELIREKVLHATREEIPHSIAVVMDSMQRRDNGAVYVGATIIVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKQGKML 253
>gi|334365894|ref|ZP_08514843.1| ribosome biogenesis GTPase Era [Alistipes sp. HGB5]
gi|390947946|ref|YP_006411706.1| GTP-binding protein Era [Alistipes finegoldii DSM 17242]
gi|313158000|gb|EFR57406.1| ribosome biogenesis GTPase Era [Alistipes sp. HGB5]
gi|390424515|gb|AFL79021.1| GTP-binding protein Era [Alistipes finegoldii DSM 17242]
Length = 293
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 155/246 (63%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+KLSI+T+K QTTRHRI+GI SG ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLMNALVGEKLSIITSKAQTTRHRIMGIVSGEDFQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPILL 231
I+ K + L MMK V A +AD I+ + D + +R EI +G ++ +P ++
Sbjct: 62 IL-KPSYKLQESMMKFVTGAVTDADVILYVTDTVEQGDRSAEI----IGRIRESGIPTVV 116
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DL P + ++ + + +++P SAK +E + IL LP GPA+YPK
Sbjct: 117 VINKIDLSTPEALDALVDKWRQELPEAQIVPASAKENFNIEGLFKTILALLPEGPAFYPK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+ +++ RFF EIIREKI Y E+PY C++ + SY+ PT D I I V ++SQ
Sbjct: 177 ETLTDKTLRFFASEIIREKILKFYDKEIPYCCEIEIDSYREEPTI-DRIAATIYVARDSQ 235
Query: 352 KIILIG 357
K ILIG
Sbjct: 236 KGILIG 241
>gi|409197745|ref|ZP_11226408.1| GTPase Era [Marinilabilia salmonicolor JCM 21150]
Length = 293
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 164/246 (66%), Gaps = 5/246 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HK+G+V ++G PNVGKSTL+N++IG++LSI+T+K QTTRHRI GI + +YQ++ DTP
Sbjct: 2 THKAGFVNIIGNPNVGKSTLSNELIGERLSIITSKAQTTRHRIFGIVNKDDYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+++ K + +SM+ + +SA +AD ++ + D + P++ +E LE K +P LL
Sbjct: 62 GVLKPKYKLQESMLHFS-KSALSDADILLYITDTVETPDKNNEFLEMV---KKSDIPALL 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DLI+ E+ +++++K E+ P+SA + ++++ D I+ LP P ++ K
Sbjct: 118 VINKIDLIQQKELEDLVDFWKKEIPRAEIYPMSALHKFNIQNLYDRIVELLPESPPFFDK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFF+ EIIREKI + Y+ E+PY+ ++ V +K D I+ I V ++SQ
Sbjct: 178 DALTDKPERFFISEIIREKILLNYQKEIPYSVEIEVQEFKEGAKRTD-IRAVIHVSRDSQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|408673177|ref|YP_006872925.1| GTP-binding protein Era-like-protein [Emticicia oligotrophica DSM
17448]
gi|387854801|gb|AFK02898.1| GTP-binding protein Era-like-protein [Emticicia oligotrophica DSM
17448]
Length = 302
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 167/253 (66%), Gaps = 14/253 (5%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSG----PEYQMI 166
P+HK+G+++++GKPNVGKSTL N ++G++LSI+T+K QTTRHRI+GI +G ++Q++
Sbjct: 8 PDHKAGFISIVGKPNVGKSTLMNILVGERLSIITSKAQTTRHRIMGIVNGVQNGTDFQLV 67
Query: 167 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 226
DTPGII K ++ L MM V + +AD I+ + D + + D+++E+
Sbjct: 68 YSDTPGII-KPVYELHKSMMHFVHGSLEDADVILFVTDIFEKHDE-DDVIEKL---QHAN 122
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
+PILL++NK DL P +I +K+ ++++ E+IP+SA VE + I+ LP+
Sbjct: 123 IPILLIINKIDLATPEQIEEKINYWKENFKALEIIPISALQQQNVEGLLPKIVDLLPVHY 182
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EI 344
Y+PKD +++ PERFF EIIREKIF Y EVPY+C+V + S+K + +D I V EI
Sbjct: 183 PYFPKDELTDKPERFFAAEIIREKIFTNYTKEVPYSCEVVISSFKEK---EDMIVVSSEI 239
Query: 345 VVEKNSQKIILIG 357
VE+ +Q+ IL+G
Sbjct: 240 YVERTTQRAILLG 252
>gi|313675799|ref|YP_004053795.1| GTP-binding protein era [Marivirga tractuosa DSM 4126]
gi|312942497|gb|ADR21687.1| GTP-binding protein Era [Marivirga tractuosa DSM 4126]
Length = 294
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 165/254 (64%), Gaps = 13/254 (5%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S HK+G+V+++GKPNVGKSTL N ++G++LSI+T+K QTTRHRI+GI SG ++Q++
Sbjct: 2 SENQHKAGFVSIVGKPNVGKSTLMNALVGERLSIITSKAQTTRHRIMGILSGADFQIVYS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHK 224
DTPGI+ + + +S MM+ V++A +AD ++ + D + E ID I GV
Sbjct: 62 DTPGILSPQYELHNS-MMRFVKAALEDADIMLFVTDLYEKYEEGDVLIDRIKNSGV---- 116
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
PI+L++NK D K + K++++ + + D I VSA ++ + + ++ LP+
Sbjct: 117 ---PIILIMNKIDQSKGSQAQDKMKYWAEIIEPDHQIMVSALEKVNIDGLFNKLMDLLPV 173
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
P Y+PK+ +++ PE+FFV EIIREKIF Y+ EVPY+C+V V +K T I+ EI
Sbjct: 174 HPPYFPKEEMTDKPEKFFVEEIIREKIFQNYKKEVPYSCEVVVTEFKEDETIIR-IRAEI 232
Query: 345 VVEKNSQKIILIGK 358
VE+ SQK I+IGK
Sbjct: 233 YVERKSQKGIIIGK 246
>gi|424841638|ref|ZP_18266263.1| GTP-binding protein Era [Saprospira grandis DSM 2844]
gi|395319836|gb|EJF52757.1| GTP-binding protein Era [Saprospira grandis DSM 2844]
Length = 299
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 155/246 (63%), Gaps = 4/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+++SI+TNKPQTTRHRILGI S ++Q++ DTPG
Sbjct: 8 HKSGFVNIVGHPNVGKSTLMNALVGERMSIITNKPQTTRHRILGIVSEEDFQIVFSDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+I+ + + M + V+S ++D ++++ DA + I E K K P+ L+
Sbjct: 68 LIQDPSYKMQERMNEYVKSTLEDSDLMLLVADATEKISDESTIFELLA---KLKAPVFLL 124
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E ++L + K D E+IP+SA + + + ++ ++P GP YYPK+
Sbjct: 125 LNKIDLLPPKEQLEQLAAWSKKLDFAELIPISALNRINTDLVLEKVIERMPEGPTYYPKE 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ PERFF+ EIIREKI + Y E+PY+ +V V +++ I I V + +QK
Sbjct: 185 QFTDRPERFFMSEIIREKILLNYHQEIPYSVEVVVEAFQEEENITR-ILANIYVARKTQK 243
Query: 353 IILIGK 358
ILIGK
Sbjct: 244 AILIGK 249
>gi|379795926|ref|YP_005325924.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872916|emb|CCE59255.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 299
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEDIGRGDEYIMEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + + E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEQYQTYMNFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|345022124|ref|ZP_08785737.1| GTP-binding protein [Ornithinibacillus scapharcae TW25]
Length = 300
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 161/252 (63%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N+KSG++A++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q I DTP
Sbjct: 4 NYKSGFIAIIGRPNVGKSTFMNKVIGQKIAIMSDKPQTTRNKIQGVLTQNDAQFIFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+K + D ++ +++A + R D+ + + + + K P+ L
Sbjct: 64 GIHKPK-HRLGDFMVKIAENTLNEVDAVLFMINADEGYGRGDQFIIDRL--ERVKSPVFL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DL+ P ++ +E+Y+ D +E+IP+SA G+ V + D + LP GP +YP
Sbjct: 121 VVNKIDLVHPDKLLPLIEFYKDKYDFEEIIPISALQGNNVNRLLDVLKEHLPEGPQFYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V++HPERF + E+IREK+ R E+P++ V + + + R + FIQ IV E+ SQ
Sbjct: 181 DQVTDHPERFIISELIREKVLHLTREEIPHSIAVVIENIEKRESNAIFIQAVIVTERKSQ 240
Query: 352 KIILIGKVSPFL 363
K ILIGK L
Sbjct: 241 KGILIGKQGSML 252
>gi|358061039|ref|ZP_09147723.1| GTP-binding protein Era [Staphylococcus simiae CCM 7213]
gi|357256492|gb|EHJ06856.1| GTP-binding protein Era [Staphylococcus simiae CCM 7213]
Length = 299
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNANEDIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+K+ D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEAYQKYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|261405616|ref|YP_003241857.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10]
gi|261282079|gb|ACX64050.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10]
Length = 300
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + P+ Q++ DTPGI
Sbjct: 7 KSGFVAIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTPDSQVVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M + + G + + LVDA + D + E + K K PI+LV+
Sbjct: 67 HKRQSKLGDYMNQTALSTLG-EVEAALFLVDASEGIGGGDRYIAEQL--QKIKTPIILVM 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+P + +E Y K D E++P+SAK G V + + I LP GP YYP+D
Sbjct: 124 NKIDKIEPPALLPLIEQYRKLHDFAEIVPISAKLGSNVNTLLEQIQKYLPPGPQYYPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPE+F E+IREKI R EVP++ V + + +I I VE++SQK
Sbjct: 184 VTDHPEQFVCAELIREKILHMTREEVPHSIAVTIEDMRVEENGTVYISAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGALL 253
>gi|404417997|ref|ZP_10999779.1| GTPase Era [Staphylococcus arlettae CVD059]
gi|403489713|gb|EJY95276.1| GTPase Era [Staphylococcus arlettae CVD059]
Length = 298
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 3 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTEDDAQIIFLDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + K P+ LV
Sbjct: 63 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNINEDIGRGDEFIMEML--KTIKTPVFLV 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ ++E Y+K+ D E++P+SA GH V+ + + LP GP YYP D
Sbjct: 120 LNKIDLVHPDELMPRIEQYQKYMDFTEIVPISALEGHNVDHFLSVLKSYLPEGPKYYPDD 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGE+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 180 QISDHPEQFVVGELIREKILHLTSEEIPHAIGVNVDRMVKEDEDRVRIEATIFVERDSQK 239
Query: 353 IILIGK 358
I+IGK
Sbjct: 240 GIVIGK 245
>gi|322420694|ref|YP_004199917.1| GTP-binding protein Era [Geobacter sp. M18]
gi|320127081|gb|ADW14641.1| GTP-binding protein Era [Geobacter sp. M18]
Length = 297
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 157/245 (64%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+V+++G+PNVGKSTL N+++G+KL I ++KPQTTR++I GI + P Q++ DTPGI
Sbjct: 7 RSGFVSIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNQIKGIHNVPGGQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L+ M++ S+ D I+ LVD PE+ E+++E V D P++LVL
Sbjct: 67 HRAKTR-LNKFMVEEALSSVQGVDLILFLVDGAFDPEKEAEMIKE-VLSGVDA-PVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI GE+ ++ Y + E+IPVSA G GV+ + + LP GP Y+P DI
Sbjct: 124 NKIDLIPKGELLGRMAIYGETYPFKEIIPVSASTGDGVDQLVQLVHGLLPEGPCYFPDDI 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PERF V EIIREKIF +EVPY+ V V S+K R IQ I VE++SQK
Sbjct: 184 LTDVPERFIVAEIIREKIFRLTHDEVPYSVAVVVDSFKERENGVVAIQATINVERDSQKG 243
Query: 354 ILIGK 358
I+IG+
Sbjct: 244 IIIGR 248
>gi|91201100|emb|CAJ74159.1| strongly similar to GTP-binding protein Era [Candidatus Kuenenia
stuttgartiensis]
Length = 301
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ +SGYVAV+G+PNVGKSTL N +G KLSIVT+KPQTTR +I+GI + +YQ+I +DTP
Sbjct: 9 DFRSGYVAVIGEPNVGKSTLINNYMGCKLSIVTHKPQTTRKKIMGILTKEDYQIIFFDTP 68
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GIIE + L M+K S AD ++++V+ K P +I + + + PILL
Sbjct: 69 GIIEP-TYELQKYMVKTAYSVIKEADILLMMVEPFKQPAKIHRDVVKKLATFNK--PILL 125
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D+++ ++ + Y E+IP+SAK G +E + I+ LP G YP+
Sbjct: 126 VINKVDMVEKDKLLPIIASYNTLMKFSEIIPISAKEGTNLERLLSLIVQYLPEGEPLYPE 185
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D ++++ ERF EIIREK+F Y E+PY+ V + +K R +D+I+ I VE+ SQ
Sbjct: 186 DSITDYNERFLAAEIIREKVFEFYGEEIPYSSTVEIEEFKEREKGRDYIKAIIYVERKSQ 245
Query: 352 KIILIG 357
K I+IG
Sbjct: 246 KGIIIG 251
>gi|372221091|ref|ZP_09499512.1| GTPase Era [Mesoflavibacter zeaxanthinifaciens S86]
Length = 295
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 159/252 (63%), Gaps = 19/252 (7%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI +G ++Q+++ DTPG
Sbjct: 4 HKSGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVNGDDFQVVISDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
II K + L + MM V+SA +AD ++ LV EI E+G+ D
Sbjct: 64 II-KPAYELQTSMMDFVKSAFEDADVLLYLV----------EIGEKGLKDEAFFQKIQNS 112
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K+P+LL+LNK D + + +++++++ E+ P+SA V ++ D IL LP G
Sbjct: 113 KIPVLLLLNKIDTSEQSILEEQIQYWQDLLPRAEIHPISALQNFNVREVFDRILELLPEG 172
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
PAYYPKD +++ PERFFV E IREKI + Y+ E+PYA +V + I+ I+
Sbjct: 173 PAYYPKDQITDKPERFFVNETIREKILLNYKKEIPYAVEVETEEF-LEDDDIIRIRSIIM 231
Query: 346 VEKNSQKIILIG 357
VE++SQK I+IG
Sbjct: 232 VERDSQKGIIIG 243
>gi|418567001|ref|ZP_13131366.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21272]
gi|371982705|gb|EHO99853.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21272]
Length = 299
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMIVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|379730719|ref|YP_005322915.1| GTPase Era [Saprospira grandis str. Lewin]
gi|378576330|gb|AFC25331.1| GTPase Era [Saprospira grandis str. Lewin]
Length = 299
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 155/246 (63%), Gaps = 4/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG+V ++G PNVGKSTL N ++G+++SI+TNKPQTTRHRILGI S ++Q++ DTPG
Sbjct: 8 HRSGFVNIVGHPNVGKSTLMNALVGERMSIITNKPQTTRHRILGIVSEEDFQIVFSDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+I+ + + M + V+S ++D ++++ DA + I E K K P+ L+
Sbjct: 68 LIQDPSYKMQERMNEYVKSTLEDSDLMLLVADATEKIADESAIFELLA---KLKAPVFLL 124
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E ++L + K D E+IP+SA + + + ++ ++P GP YYPK+
Sbjct: 125 LNKIDLLPPKEQLEQLAAWSKKLDFAELIPISALNRINTDLVLEKVIERMPEGPTYYPKE 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ PERFF+ EIIREKI + Y E+PY+ +V V +++ I I V + +QK
Sbjct: 185 QFTDRPERFFMSEIIREKILLNYHQEIPYSVEVVVEAFQEEEDITR-ILANIYVARKTQK 243
Query: 353 IILIGK 358
ILIGK
Sbjct: 244 AILIGK 249
>gi|284024626|ref|ZP_06379024.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 132]
Length = 299
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+ NVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRSNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|410028613|ref|ZP_11278449.1| GTPase Era [Marinilabilia sp. AK2]
Length = 296
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 162/248 (65%), Gaps = 7/248 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HK+G+V ++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++ DTP
Sbjct: 5 THKAGFVNIIGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINDDHYQIVFSDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+++ K + L MM V + +AD I+ + D + E I++++E+ ++ +P+LL
Sbjct: 65 GMLKPK-YELHKNMMSFVHMSLEDADVILFVTDLFETDEEIEDVIEKI---NQSGVPVLL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DL K ++ + +++ + + VIP+SA E I IL +LP+ P +Y K
Sbjct: 121 VINKIDLSKENQLEEVTQYWTQRIKAETVIPISATESFNTERILQEILDRLPVHPPFYDK 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVS-YKTRPTAKDFIQVEIVVEKNS 350
D +++ PERFF EI+REKIF+ Y+ E+PY+ QV + Y+ + I+ I VE+NS
Sbjct: 181 DELTDKPERFFASEIVREKIFLNYKKEIPYSTQVEIEDFYEEEKIIR--IRAVIYVERNS 238
Query: 351 QKIILIGK 358
QK I+IG+
Sbjct: 239 QKGIIIGE 246
>gi|431796196|ref|YP_007223100.1| GTP-binding protein Era [Echinicola vietnamensis DSM 17526]
gi|430786961|gb|AGA77090.1| GTP-binding protein Era [Echinicola vietnamensis DSM 17526]
Length = 296
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 161/249 (64%), Gaps = 5/249 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ HK+G+V ++GKPNVGKSTL N ++G++LSI+++K QTTRHRILG+ +G +YQ++
Sbjct: 2 TEKTHKAGFVNIIGKPNVGKSTLMNVLVGERLSIISSKAQTTRHRILGLMNGDDYQIVFS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+++ K + L MM V + +AD IV + D + I+E++E+ +H P
Sbjct: 62 DTPGMLKPK-YELHKSMMSFVNLSLEDADVIVFVTDLYETDNEIEEVIEK--INHAGA-P 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL K ++ + +++ + D VIPVSA +E I IL +LP+ P Y
Sbjct: 118 VLLVINKIDLSKENKLEEVTQYWTERIKADTVIPVSALENFNIERIMQEILDRLPVHPPY 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y K+ +++ PERFF EIIREKIF Y+ E+PY+ +V + + T I+ I VE+
Sbjct: 178 YDKEELTDRPERFFASEIIREKIFTNYKKEIPYSTEVAIDQF-TEDDKLIRIRAIIFVER 236
Query: 349 NSQKIILIG 357
+SQK I+IG
Sbjct: 237 SSQKGIIIG 245
>gi|120437318|ref|YP_863004.1| GTP-binding protein Era [Gramella forsetii KT0803]
gi|117579468|emb|CAL67937.1| GTP-binding protein Era [Gramella forsetii KT0803]
Length = 295
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 159/252 (63%), Gaps = 19/252 (7%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N IG++LSI+T+K QTTRHRILGI +G ++QMIL DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFIGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KD 225
II K + L + MM V+SA +AD ++ +V EI EEG+ D
Sbjct: 63 II-KPAYELQASMMDFVKSAFEDADVLIYIV----------EIGEEGLKDEAFFNKISNS 111
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
++P+LL+LNK D ++ ++++++ + E+ P+SA G V + + I+ LP
Sbjct: 112 EVPVLLLLNKIDKSNQEQLEEQVQYWAEKVPTAEIHPISALEGFNVPAVFNRIIELLPES 171
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
PA+YPKD +++ PERFFV EIIREKI M Y+ E+PY+ ++ + + I+
Sbjct: 172 PAFYPKDTLTDKPERFFVNEIIREKILMHYKKEIPYSVEIETNEFFEEEKIIRMRSI-IM 230
Query: 346 VEKNSQKIILIG 357
VE+++QK I+IG
Sbjct: 231 VERDTQKGIIIG 242
>gi|407476673|ref|YP_006790550.1| GTPase Era [Exiguobacterium antarcticum B7]
gi|407060752|gb|AFS69942.1| GTPase Era [Exiguobacterium antarcticum B7]
Length = 302
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q I DTPGI
Sbjct: 7 KSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDLQTIFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L MMK +A D I+ +++ + + DE + E + D PI+LV+
Sbjct: 67 HKPK-HKLGDFMMKVATNALREVDAILFMINVTEPKGKGDEFIIEKLKDLD--TPIILVM 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P +I +E Y+ D V+P+SA G+ VE + I LP GP YYP D
Sbjct: 124 NKVDLIHPNDIPPIIESYQNELDFAAVVPISALQGNNVEPLLQEIAKILPEGPMYYPADQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQK 352
+++HPERF + E+IREK+ + R+EVP++ V + KTR I I++E++SQK
Sbjct: 184 ITDHPERFIISEMIREKVLQKTRDEVPHSIAVAIDQIKTREDGNMVDIHATILIERDSQK 243
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 244 GIIIGKRGALL 254
>gi|315303200|ref|ZP_07873857.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596]
gi|347548848|ref|YP_004855176.1| putative GTP binding protein [Listeria ivanovii subsp. ivanovii PAM
55]
gi|313628427|gb|EFR96903.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596]
gi|346981919|emb|CBW85900.1| Putative GTP binding protein [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 301
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P E+ K +E Y + D +E+IP+SA G+ V ++ D L +GP YYPKD
Sbjct: 123 NKIDLISPEELFKLIEQYRELLDFEEIIPISALQGNNVPNLLDQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|253699692|ref|YP_003020881.1| GTP-binding protein Era [Geobacter sp. M21]
gi|259645946|sp|C6E2H7.1|ERA_GEOSM RecName: Full=GTPase Era
gi|251774542|gb|ACT17123.1| GTP-binding protein Era [Geobacter sp. M21]
Length = 297
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 155/254 (61%), Gaps = 11/254 (4%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +SG+V+++G+PNVGKSTL N+++G+KL I ++KPQTTR+RI GI + P Q++
Sbjct: 2 SEKKFRSGFVSIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNRIKGIHNVPGGQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHK 224
DTPGI K L+ M+ S+ D I+ LVD PE+ I E+L GV
Sbjct: 62 DTPGIHRAK-SRLNKFMVDEALSSVQGVDLILFLVDGAVDPEKEAGMIKEVLS-GV---- 115
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
P++LV+NK DL+ GE+ +++ Y E+IPVSA G GVE + + LP
Sbjct: 116 -DAPVILVMNKIDLVPKGELLERMSCYGDTYPFKEIIPVSAGTGDGVEQLVQLVHGLLPE 174
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP Y+P DI+++ PERF V EI+REKIF +EVPY+ V V S+K R I I
Sbjct: 175 GPCYFPDDILTDVPERFIVAEIVREKIFRLTHDEVPYSTAVVVDSFKERENGVVAISATI 234
Query: 345 VVEKNSQKIILIGK 358
VE++SQK I+IGK
Sbjct: 235 NVERDSQKGIIIGK 248
>gi|194334593|ref|YP_002016453.1| GTP-binding protein Era [Prosthecochloris aestuarii DSM 271]
gi|194312411|gb|ACF46806.1| GTP-binding protein Era [Prosthecochloris aestuarii DSM 271]
Length = 307
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 154/258 (59%), Gaps = 7/258 (2%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
+ H N GY A++G PN GKSTL N+++ KLSIVT K QTTR +I GI + Q+I
Sbjct: 2 SDHDNFSCGYAAIIGPPNAGKSTLLNRLLDHKLSIVTPKSQTTRKKITGIYHNEDCQIIF 61
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-EILEEGVGD--HK 224
DTPGI+ +HML M+K R AD +V L+ A + D E ++ D +
Sbjct: 62 LDTPGIMIDPMHMLHEAMLKTTRETLREADVVVALIPAVRKETLFDREFTKQLFHDWLTR 121
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
+K P++ VLNK DL+ E + L K ++ + +SA G V+D+ + + LP+
Sbjct: 122 EKKPVVAVLNKCDLLSKAEQKEALAMIRKELKPEKAMALSALQGTHVDDLVEALQPFLPM 181
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFI 340
YP+DI+S PERFFV EIIREKIF+QY E+PYA +V + +K + PT KD I
Sbjct: 182 DEPLYPEDILSTAPERFFVSEIIREKIFLQYGKEIPYATEVVIDEFKEQHEEDPTRKDLI 241
Query: 341 QVEIVVEKNSQKIILIGK 358
+ +VVE+++QK ILIGK
Sbjct: 242 RCSVVVERDTQKHILIGK 259
>gi|395216004|ref|ZP_10401132.1| GTPase Era [Pontibacter sp. BAB1700]
gi|394455598|gb|EJF10049.1| GTPase Era [Pontibacter sp. BAB1700]
Length = 295
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 170/253 (67%), Gaps = 14/253 (5%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S HK+G+V+++GKPNVGKSTL N ++G+KLSI+T+K QTTRHRI+GI +G ++Q++
Sbjct: 2 SQAPHKAGFVSIVGKPNVGKSTLMNALVGEKLSIITSKAQTTRHRIMGILNGDDFQIVYS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEI--LEEGVGDHKDK 226
DTPGII+ + + L MM VR++ +AD I+ + D + + D I L+ +
Sbjct: 62 DTPGIIKPQ-YALHESMMSFVRTSLEDADIILFVTDIYEKHDEDDVIKRLQHA------E 114
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
+PILL++NK D E+ +K+ ++++ + E+ P+SA + GVE + + ++ LP P
Sbjct: 115 VPILLLINKIDQATEEEVQEKVAYWQEKMNPTEIHPISALHNFGVEQLFNRLMALLPEHP 174
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EI 344
A+YPKD +++ PERFFV E+IREKIF+ Y+ E+PY+ +V V +K +D I++ EI
Sbjct: 175 AFYPKDELTDKPERFFVSEMIREKIFLNYKKEIPYSTEVVVEEFK---EEEDIIRIRAEI 231
Query: 345 VVEKNSQKIILIG 357
VE+ SQK I+IG
Sbjct: 232 SVERKSQKGIVIG 244
>gi|308535355|ref|YP_003933744.1| GTP-binding protein Era [Geobacter bemidjiensis Bem]
gi|308052700|gb|ADO00832.1| LOW QUALITY PROTEIN: GTP-binding protein Era [Geobacter
bemidjiensis Bem]
Length = 297
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 156/259 (60%), Gaps = 11/259 (4%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +SG+V+++G+PNVGKSTL N+++G+KL I ++KPQTTR+RI GI + P Q++
Sbjct: 2 SEKKFRSGFVSIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNRIKGIHNVPGGQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHK 224
DTPGI K L+ M+ S+ D I+ LVD PE+ I E+L GV
Sbjct: 62 DTPGIHRAK-SRLNKFMVDEALSSVQGVDLILFLVDGAVDPEKEAGMIKEVLS-GV---- 115
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
P++LV+NK DL+ GE+ +++ Y E+IPVSA G GVE + + LP
Sbjct: 116 -DAPVILVMNKIDLVPKGELLERMSCYGDTYPFKEIIPVSAGTGDGVEQLVQLVHGLLPE 174
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP Y+P DI+++ PERF V EI+REKIF +EVPY+ V V S+K R I I
Sbjct: 175 GPCYFPDDILTDVPERFIVAEIVREKIFRLTHDEVPYSTAVVVDSFKERENGVVAISATI 234
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 235 NVERDSQKGIIIGKKGEML 253
>gi|163786092|ref|ZP_02180540.1| putative GTP-binding protein [Flavobacteriales bacterium ALC-1]
gi|159877952|gb|EDP72008.1| putative GTP-binding protein [Flavobacteriales bacterium ALC-1]
Length = 293
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 158/245 (64%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N IG+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFIGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ +V+ + + DE + + + K+P+LL+
Sbjct: 62 II-KPAYELQTSMMDFVKSAFEDADVLIYMVEIGEKALK-DEAFFKKITN--SKIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D ++ ++ E ++ E P+SA G V+++ D I+ LP PA+YPKD
Sbjct: 118 LNKIDNSNQEQLEEQAELWQSKVPNAEFYPISALKGFNVQNVFDRIIELLPESPAFYPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI M Y+ E+PYA +V+ + V I+VE+ +QK
Sbjct: 178 QLTDKPERFFVNEAIREKILMHYKKEIPYAVEVDTEEFFEEEKIIRMRSV-IMVERETQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|319952376|ref|YP_004163643.1| gtp-binding protein era-like-protein [Cellulophaga algicola DSM
14237]
gi|319421036|gb|ADV48145.1| GTP-binding protein Era-like-protein [Cellulophaga algicola DSM
14237]
Length = 295
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 158/245 (64%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPG
Sbjct: 4 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQMILSDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM V+SA +AD ++ +V+ + + + E+ K+P+LL+
Sbjct: 64 II-KPAYELQSSMMDFVKSAFEDADILIYMVEIGEKALKDERFFEKL---KNSKIPVLLL 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D+ + G + +++++ + E+ P+SA V+++ IL LP+ PA+YPKD
Sbjct: 120 LNKIDVSEQGILEAQVQYWHEQLPTAEIHPISALQNFNVKEVFLRILELLPVSPAFYPKD 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI Y+ E+PY+ +++ + V I+VE+ SQK
Sbjct: 180 QLTDKPERFFVNETIREKILQNYKKEIPYSVEIDTEEFFEDDKIIRMRSV-IMVERESQK 238
Query: 353 IILIG 357
I+IG
Sbjct: 239 GIIIG 243
>gi|188590271|ref|YP_001920268.1| GTP-binding protein Era [Clostridium botulinum E3 str. Alaska E43]
gi|251778596|ref|ZP_04821516.1| GTP-binding protein Era [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|226741197|sp|B2V2K0.1|ERA_CLOBA RecName: Full=GTPase Era
gi|188500552|gb|ACD53688.1| GTP-binding protein Era [Clostridium botulinum E3 str. Alaska E43]
gi|243082911|gb|EES48801.1| GTP-binding protein Era [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 295
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 157/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D+
Sbjct: 120 NKIDESTPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PERF V EI+REK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVPERFVVSEIVREKALRCLRDEVPHGIAVDIIQMKQSDNGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 240 IIIGKNGQML 249
>gi|298206898|ref|YP_003715077.1| GTP-binding protein [Croceibacter atlanticus HTCC2559]
gi|83849532|gb|EAP87400.1| putative GTP-binding protein [Croceibacter atlanticus HTCC2559]
Length = 294
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 162/245 (66%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q++L DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM V+SA +AD ++ +V+ + + DE + + + ++P+LL+
Sbjct: 63 II-KPAYQLQENMMDFVKSAFEDADVLIYMVEIGEQSLK-DEAFFKKITNA--EIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D ++ ++++++++ E+ P+SA G V ++ + I+ +P PA+YPKD
Sbjct: 119 LNKIDTSDQHQLEEQMQYWKEKVPTAEIYPISALEGFNVSEVLNRIIEVMPESPAFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV EIIREKI M Y+ E+PY+ +V+ + + I+VE++SQK
Sbjct: 179 QLTDKPERFFVNEIIREKILMHYKKEIPYSVEVDTEEFFEEEEIIKMRSI-IMVERDSQK 237
Query: 353 IILIG 357
I+IG
Sbjct: 238 GIIIG 242
>gi|187934969|ref|YP_001885107.1| GTP-binding protein Era [Clostridium botulinum B str. Eklund 17B]
gi|226741198|sp|B2TMB9.1|ERA_CLOBB RecName: Full=GTPase Era
gi|187723122|gb|ACD24343.1| GTP-binding protein Era [Clostridium botulinum B str. Eklund 17B]
Length = 295
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 157/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGEDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D+
Sbjct: 120 NKIDESTPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PERF V EI+REK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVPERFVVSEIVREKALRCLRDEVPHGIAVDIIQMKQSDNGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 240 IIIGKNGQML 249
>gi|386820944|ref|ZP_10108160.1| GTP-binding protein Era [Joostella marina DSM 19592]
gi|386426050|gb|EIJ39880.1| GTP-binding protein Era [Joostella marina DSM 19592]
Length = 295
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 158/250 (63%), Gaps = 13/250 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
NHK+G+V ++G PNVGKSTL N IG+KLSI+T+K QTTRHRI GI +G ++Q++ DTP
Sbjct: 3 NHKAGFVNIIGNPNVGKSTLMNAFIGEKLSIITSKAQTTRHRIFGIVNGDDFQIVFSDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKLPI 229
GII K + L MM V+SA +AD ++ +V+ + E+ +E D KLP+
Sbjct: 63 GII-KPAYELQQSMMDFVKSAFEDADVLIYMVEIGEK-----ELKDEAFFDKITASKLPV 116
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LL+LNK D+ + +++W+ + E+ P+SA ++ + + IL LP P +Y
Sbjct: 117 LLLLNKIDISSQEVLEDQVQWWSEKVPNAEIYPISALTNFNIDTVFNRILELLPASPPFY 176
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVE 347
PKD +++ PERFFV E +REKI + Y+ E+PYA +V + +D I++ I+VE
Sbjct: 177 PKDQITDKPERFFVNETVREKILINYKKEIPYAVEVETEEF---IEDEDIIRIRSVIMVE 233
Query: 348 KNSQKIILIG 357
+++QK I+IG
Sbjct: 234 RDTQKGIIIG 243
>gi|110639447|ref|YP_679656.1| GTP-binding protein Era [Cytophaga hutchinsonii ATCC 33406]
gi|110282128|gb|ABG60314.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 298
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 163/250 (65%), Gaps = 11/250 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HK+G+V+++G+PN GKSTL N ++G++LSI+T K QTTRHR++GI + PE+Q++ DTP
Sbjct: 6 THKAGFVSIIGRPNAGKSTLMNCLVGERLSIITPKAQTTRHRVMGIINDPEFQIVYSDTP 65
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+IE K + S MM+ V + +AD I+ ++D K PE +L+ + ++P+LL
Sbjct: 66 GVIEPKYELQKS-MMRFVDFSLEDADMILWVLD-VKDPEDHALVLQRL---NNVEVPVLL 120
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
VLNK DL EI +E W +F D ++ VSA + + W+L+ LP P +Y
Sbjct: 121 VLNKIDLSTQEEIDALVEKWKAEFPKADSILAVSALKNFNSDMVLKWVLSHLPQHPPFYD 180
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEK 348
KD +++ PERFF EI REKIF Y E+PY+ +V + S+K + KD ++++ I+VE+
Sbjct: 181 KDELTDKPERFFASEIFREKIFKNYSKEIPYSSEVLIESFKDQ---KDLLRIQAVIIVER 237
Query: 349 NSQKIILIGK 358
+SQK I+IG+
Sbjct: 238 DSQKGIVIGQ 247
>gi|149277443|ref|ZP_01883584.1| GTP-binding protein [Pedobacter sp. BAL39]
gi|149231676|gb|EDM37054.1| GTP-binding protein [Pedobacter sp. BAL39]
Length = 292
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 166/252 (65%), Gaps = 6/252 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V+++GKPNVGKSTL N +IG+KLSI+T K QTTRHRILGI + EYQ++ DTP
Sbjct: 2 SHKAGFVSIIGKPNVGKSTLMNALIGEKLSIITPKAQTTRHRILGIVNEEEYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ K + DSMM +V+ A +AD I+ + D + + +++LE+ + +P+++
Sbjct: 62 GIIKPKYGLQDSMMT-SVKGALTDADLILFVTDINEQHDE-NDVLEKIID---TTIPMIV 116
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK D ++ +K ++++ + + +SA + + +E I D +L LP PAYY K
Sbjct: 117 LINKIDNATQEQVEEKSAFWQEKLNPKYIFAISALHQYNLEGIMDRVLDFLPEHPAYYDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+ +++ +RFFV EIIREKIF Y+ E+PY+ +V + ++K I EI+VE++SQ
Sbjct: 177 EDLTDRNQRFFVSEIIREKIFNNYQKEIPYSTEVVITAFKEEEKLVR-ISAEIIVERDSQ 235
Query: 352 KIILIGKVSPFL 363
K ILIGK L
Sbjct: 236 KNILIGKGGSML 247
>gi|150010993|gb|ABR57154.1| GTP-binding protein Era [Staphylococcus xylosus]
Length = 299
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ + D I+ +V+ + R DE + E + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMEML--KTIKTPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ ++E Y+++ D E++P+SA GH V+ + + + LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPRIEKYKRYLDFTEIVPISALEGHNVDHFINVLKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGE+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGELIREKILHLTSEEIPHAIGVNVDRMVKEDEDRVRIEATIFVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|325285624|ref|YP_004261414.1| GTP-binding protein Era-like-protein [Cellulophaga lytica DSM 7489]
gi|324321078|gb|ADY28543.1| GTP-binding protein Era-like-protein [Cellulophaga lytica DSM 7489]
Length = 294
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 165/247 (66%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM V++A +AD ++ +V+ + + DE + + K+P+LL+
Sbjct: 63 II-KPAYELQSSMMDFVKTAFEDADILIYMVEIGEKALK-DEAFFNKLKN--SKIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + ++ ++++++++ E+ P+SA V+++ I+ LPL PAYYPKD
Sbjct: 119 LNKIDASEQEKLEEQVQYWQEQLPTAEIHPISALMNFNVKEVFLRIIELLPLSPAYYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV E IREKI Y+ EVPYA +++ + +D I++ I+VE++S
Sbjct: 179 QLTDKPERFFVNETIREKILQFYKKEVPYAVEIDTEEF---FEDEDIIRMRAVIMVERDS 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|311031640|ref|ZP_07709730.1| GTP-binding protein Era [Bacillus sp. m3-13]
Length = 305
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 162/252 (64%), Gaps = 6/252 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ N+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++
Sbjct: 5 TNTNYKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVFTQDDAQIVFI 64
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + + DE + E + + P
Sbjct: 65 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAKEGLGKGDEFIIEKLKE--TSTP 121
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ +E Y+ E++P+SA G+ VE + D I LP GP Y
Sbjct: 122 VYLVINKIDEVHPDDLLPLMETYKALYPFKEIVPISALQGNNVEVLLDQIKKFLPEGPQY 181
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVV 346
YP D V++HPERF V E+IREK+ R EVP++ V + S K R KD IQ +VV
Sbjct: 182 YPADQVTDHPERFIVAELIREKVLHLTREEVPHSIAVAIDSMKKREN-KDMVDIQATVVV 240
Query: 347 EKNSQKIILIGK 358
E++SQK I+IGK
Sbjct: 241 ERDSQKGIVIGK 252
>gi|332876945|ref|ZP_08444698.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332685053|gb|EGJ57897.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 293
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 157/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PIL 230
II K + L MM V+ A +AD ++ +V+ + + EE D +KL PIL
Sbjct: 62 II-KPAYALQESMMAFVKDAFDDADILIYMVEIGEKG-----LKEEAFFDRINKLNIPIL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + + +++ ++++ EV P+SA +++ D IL LP PA++P
Sbjct: 116 LLINKIDTSEQQVLEEQVAYWKEQVPRAEVYPISALRNFQTKEVFDRILALLPESPAFFP 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI + Y+ EVPY+ +V S+ T I+ I+VE+ S
Sbjct: 176 KDQLTDKPERFFVNEIIREKILLHYKKEVPYSVEVTTESFADSETILH-IRSVIMVERES 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|363582357|ref|ZP_09315167.1| GTPase Era [Flavobacteriaceae bacterium HQM9]
Length = 296
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 162/248 (65%), Gaps = 9/248 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
NHK+G+V ++G PNVGKSTL N +IG+KLSI+T+K QTTRHRILGI +G ++Q+I DTP
Sbjct: 3 NHKAGFVNIIGNPNVGKSTLMNALIGEKLSIITSKAQTTRHRILGIVNGDDFQVIFSDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L + MM V+SA +AD ++ +V+ + E DE + + K+P+LL
Sbjct: 63 GII-KPAYELQTSMMDFVKSAFEDADILIYMVEIGEK-ELKDEQFFNKINN--SKIPVLL 118
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK D + +++ ++ E++P+SA ++ + D I+ LP+ PA+YPK
Sbjct: 119 LLNKIDKSNQETLEEQVAYWTHKVSNAEILPISALEKFNIQTVFDRIVDLLPVSPAFYPK 178
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFFV E IREKI + Y+ E+PYA +V S++ + I++ I+VE+
Sbjct: 179 DQLTDKPERFFVNEAIREKILLHYKKEIPYAVEVVTESFE---EDEKIIRINSIIMVERE 235
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 236 TQKGIIIG 243
>gi|255027717|ref|ZP_05299703.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-003]
Length = 301
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIVEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|424714338|ref|YP_007015053.1| GTPase Era [Listeria monocytogenes serotype 4b str. LL195]
gi|424013522|emb|CCO64062.1| GTPase Era [Listeria monocytogenes serotype 4b str. LL195]
Length = 337
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 158/258 (61%), Gaps = 4/258 (1%)
Query: 107 YASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 166
Y KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I
Sbjct: 35 YVMSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQII 94
Query: 167 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 226
DTPGI + K H L M+K + D I ++DA R DE + E + + +
Sbjct: 95 FIDTPGIHKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT- 152
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+ L++NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP
Sbjct: 153 -PVFLLINKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGP 211
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIV 345
YYPKD +++HPERF + E+IRE++ R EVP++ V + + P T K I I+
Sbjct: 212 MYYPKDQITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATII 271
Query: 346 VEKNSQKIILIGKVSPFL 363
VE+++QK I+IGK L
Sbjct: 272 VERSTQKGIIIGKQGQML 289
>gi|326334918|ref|ZP_08201119.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692955|gb|EGD34893.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 292
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 158/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G++ ++G PNVGKSTL N ++G++LSI+T K QTTRHRI GI SG ++QMI DTPG
Sbjct: 2 HKAGFINIIGNPNVGKSTLLNALVGERLSIITAKAQTTRHRIFGIVSGEDFQMIFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM VR A +AD ++ +V+ + + +E ++ ++ K+PILL+
Sbjct: 62 II-KPAYQLQSSMMDFVRDAFEDADILIYMVEIGEKDLKDEEFFKK---INEAKVPILLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + L ++++ EV P+SA VE + +L LP PA+YPKD
Sbjct: 118 VNKIDRSDEPSVKQALSYWQEKVPKAEVYPISALENFNVEPLFHRLLELLPPSPAFYPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV E IREKI + Y+ EVPY+ +V +T + I++ I+VE++S
Sbjct: 178 QLTDKPERFFVNETIREKILLNYKKEVPYSVEVET---QTFSETEHIIRIRSIIMVERDS 234
Query: 351 QKIILIG 357
QK ILIG
Sbjct: 235 QKGILIG 241
>gi|16803502|ref|NP_464987.1| GTP-binding protein Era [Listeria monocytogenes EGD-e]
gi|46907690|ref|YP_014079.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093486|ref|ZP_00231249.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858]
gi|47095413|ref|ZP_00233023.1| GTP-binding protein Era [Listeria monocytogenes str. 1/2a F6854]
gi|226224063|ref|YP_002758170.1| GTP binding protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824479|ref|ZP_05229480.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194]
gi|254827750|ref|ZP_05232437.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165]
gi|254852087|ref|ZP_05241435.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503]
gi|254912136|ref|ZP_05262148.1| GTP-binding protein Era [Listeria monocytogenes J2818]
gi|254936464|ref|ZP_05268161.1| GTP-binding protein Era [Listeria monocytogenes F6900]
gi|255521277|ref|ZP_05388514.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-175]
gi|284801849|ref|YP_003413714.1| GTP-binding protein Era [Listeria monocytogenes 08-5578]
gi|284994991|ref|YP_003416759.1| GTP-binding protein Era [Listeria monocytogenes 08-5923]
gi|300765605|ref|ZP_07075584.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017]
gi|386043773|ref|YP_005962578.1| GTP-binding protein Era [Listeria monocytogenes 10403S]
gi|386047114|ref|YP_005965446.1| GTP-binding protein Era [Listeria monocytogenes J0161]
gi|386050438|ref|YP_005968429.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-561]
gi|386053715|ref|YP_005971273.1| GTP-binding protein Era [Listeria monocytogenes Finland 1998]
gi|386732201|ref|YP_006205697.1| GTPase Era [Listeria monocytogenes 07PF0776]
gi|404281019|ref|YP_006681917.1| GTP-binding protein [Listeria monocytogenes SLCC2755]
gi|404283954|ref|YP_006684851.1| GTP-binding protein [Listeria monocytogenes SLCC2372]
gi|404286884|ref|YP_006693470.1| GTP-binding protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404410761|ref|YP_006696349.1| GTP-binding protein [Listeria monocytogenes SLCC5850]
gi|404413540|ref|YP_006699127.1| GTP-binding protein [Listeria monocytogenes SLCC7179]
gi|405752682|ref|YP_006676147.1| GTP-binding protein [Listeria monocytogenes SLCC2378]
gi|405755620|ref|YP_006679084.1| GTP-binding protein [Listeria monocytogenes SLCC2540]
gi|405758510|ref|YP_006687786.1| GTP-binding protein [Listeria monocytogenes SLCC2479]
gi|406704235|ref|YP_006754589.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L312]
gi|417316008|ref|ZP_12102666.1| GTPase Era [Listeria monocytogenes J1816]
gi|21263579|sp|Q8Y750.1|ERA_LISMO RecName: Full=GTPase Era
gi|67460115|sp|Q71ZK8.1|ERA_LISMF RecName: Full=GTPase Era
gi|259645949|sp|C1KVA9.1|ERA_LISMC RecName: Full=GTPase Era
gi|16410891|emb|CAC99540.1| lmo1462 [Listeria monocytogenes EGD-e]
gi|46880959|gb|AAT04256.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016234|gb|EAL07157.1| GTP-binding protein Era [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|47018162|gb|EAL08932.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858]
gi|225876525|emb|CAS05234.1| Putative GTP binding protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258600129|gb|EEW13454.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165]
gi|258605386|gb|EEW17994.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503]
gi|258609056|gb|EEW21664.1| GTP-binding protein Era [Listeria monocytogenes F6900]
gi|284057411|gb|ADB68352.1| GTP-binding protein Era [Listeria monocytogenes 08-5578]
gi|284060458|gb|ADB71397.1| GTP-binding protein Era [Listeria monocytogenes 08-5923]
gi|293590107|gb|EFF98441.1| GTP-binding protein Era [Listeria monocytogenes J2818]
gi|293593717|gb|EFG01478.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194]
gi|300513706|gb|EFK40774.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017]
gi|328465505|gb|EGF36734.1| GTPase Era [Listeria monocytogenes J1816]
gi|345534105|gb|AEO03546.1| GTP-binding protein Era [Listeria monocytogenes J0161]
gi|345537007|gb|AEO06447.1| GTP-binding protein Era [Listeria monocytogenes 10403S]
gi|346424284|gb|AEO25809.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-561]
gi|346646366|gb|AEO38991.1| GTP-binding protein Era [Listeria monocytogenes Finland 1998]
gi|384390959|gb|AFH80029.1| GTPase Era [Listeria monocytogenes 07PF0776]
gi|404221882|emb|CBY73245.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2378]
gi|404224820|emb|CBY76182.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2540]
gi|404227654|emb|CBY49059.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2755]
gi|404230587|emb|CBY51991.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC5850]
gi|404233456|emb|CBY54859.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2372]
gi|404236392|emb|CBY57794.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2479]
gi|404239239|emb|CBY60640.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC7179]
gi|404245813|emb|CBY04038.1| GTP-binding protein (Bex protein) [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|406361265|emb|CBY67538.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L312]
gi|441471149|emb|CCQ20904.1| GTPase Era [Listeria monocytogenes]
gi|441474277|emb|CCQ24031.1| GTPase Era [Listeria monocytogenes N53-1]
Length = 301
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|354605310|ref|ZP_09023299.1| GTP-binding protein Era [Alistipes indistinctus YIT 12060]
gi|353347889|gb|EHB92165.1| GTP-binding protein Era [Alistipes indistinctus YIT 12060]
Length = 292
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 156/250 (62%), Gaps = 15/250 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHKDKLP 228
I++ + +S MMK V+ A +AD I+ + D + E +D+IL G+
Sbjct: 62 ILKPNYKLHES-MMKVVQGALKDADIILYVTDVTEGTEHRNEFVDKILRSGI-------K 113
Query: 229 ILLVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
+LV+NK DL P ++ + + EW D ++PVSA + + + D IL LP G
Sbjct: 114 TILVINKIDLTTPDKLEQLVDEWRHILPDA-LIVPVSAAHNFNIGGLFDRILELLPEGEP 172
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
+YPKD +++ RFF EIIREKI + Y E+PY+ ++++ YK PT D I I V
Sbjct: 173 FYPKDALTDKSLRFFASEIIREKILLNYEKEIPYSVEISIEEYKEEPTI-DRISAVIYVA 231
Query: 348 KNSQKIILIG 357
++SQK ILIG
Sbjct: 232 RDSQKGILIG 241
>gi|254932647|ref|ZP_05266006.1| GTP-binding protein Era [Listeria monocytogenes HPB2262]
gi|405749806|ref|YP_006673272.1| GTP-binding protein [Listeria monocytogenes ATCC 19117]
gi|417317582|ref|ZP_12104196.1| GTPase Era [Listeria monocytogenes J1-220]
gi|424823223|ref|ZP_18248236.1| GTP-binding protein Era [Listeria monocytogenes str. Scott A]
gi|293584206|gb|EFF96238.1| GTP-binding protein Era [Listeria monocytogenes HPB2262]
gi|328474974|gb|EGF45768.1| GTPase Era [Listeria monocytogenes J1-220]
gi|332311903|gb|EGJ24998.1| GTP-binding protein Era [Listeria monocytogenes str. Scott A]
gi|404219006|emb|CBY70370.1| GTP-binding protein (Bex protein) [Listeria monocytogenes ATCC
19117]
Length = 301
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|289434744|ref|YP_003464616.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422419066|ref|ZP_16496021.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067]
gi|289170988|emb|CBH27530.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313633219|gb|EFS00091.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067]
Length = 301
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P E+ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEELFKLIEQYRELLDFEEIIPISALQGNNVPNLLEQTNANLEVGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|332292384|ref|YP_004430993.1| GTP-binding protein Era [Krokinobacter sp. 4H-3-7-5]
gi|332170470|gb|AEE19725.1| GTP-binding protein Era [Krokinobacter sp. 4H-3-7-5]
Length = 294
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 159/247 (64%), Gaps = 7/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QM+L DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMLLSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L + MM V+SA +AD ++ +V+ + + + + G K+P+LL
Sbjct: 62 GII-KPAYELQASMMDFVKSAFEDADVLLYIVELGEKELKDEAFFNKIRG---SKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
++NK D +A+ L+ W EK + EV +SA GV + + I+ LP PA+YP
Sbjct: 118 LINKIDKGNEDTLAEALKLWSEKVPNA-EVFAISALESFGVPQVFNRIIELLPESPAFYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI M Y+ E+PYA +++ + V I+VE++S
Sbjct: 177 KDQLTDKPERFFVNEIIREKILMHYKKEIPYAVEIDTEDFFEEDEIIRMRSV-IMVERDS 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|172056862|ref|YP_001813322.1| GTP-binding protein Era [Exiguobacterium sibiricum 255-15]
gi|171989383|gb|ACB60305.1| GTP-binding protein Era [Exiguobacterium sibiricum 255-15]
Length = 302
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q I DTPGI
Sbjct: 7 KSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDVQTIFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L MMK +A D I+ +++ + + DE + E + D PI+LV+
Sbjct: 67 HKPK-HKLGDFMMKVATNALREVDAILFMINVTEPKGKGDEFIIEKLKDLD--TPIILVM 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P +I +E Y+ + V+P+SA G+ VE + I LP GP YYP D
Sbjct: 124 NKVDLIHPNDIPPIIESYQNELNFAAVVPISALQGNNVEPLLQEISKILPEGPMYYPADQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQK 352
+++HPERF + E+IREK+ + R+EVP++ V + KTR I I++E++SQK
Sbjct: 184 ITDHPERFIISEMIREKVLQKTRDEVPHSIAVAIDQIKTREDGNMVDIHATILIERDSQK 243
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 244 GIIIGKRGALL 254
>gi|406662617|ref|ZP_11070708.1| Bex protein [Cecembia lonarensis LW9]
gi|405553385|gb|EKB48643.1| Bex protein [Cecembia lonarensis LW9]
Length = 296
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 161/250 (64%), Gaps = 5/250 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ HK+G+V ++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++
Sbjct: 2 TENTHKAGFVNIIGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINDDHYQIVFS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+++ K + L MM V + +AD I+ + D + E I++++E+ ++ +P
Sbjct: 62 DTPGMLKPK-YELHKNMMGFVHMSLEDADVILFVTDLFETDEEIEDVIEK---INQSGVP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL K ++ + +++ + + VIP+SA E I IL +LP+ P +
Sbjct: 118 VLLVINKIDLSKENQLEEVTQYWTQRIKAETVIPISATESFNTERILQEILDRLPVHPPF 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y KD +++ PERFF EI+REKIF+ Y+ E+PY+ QV + + I+ I VE+
Sbjct: 178 YNKDELTDKPERFFASEIVREKIFLNYKKEIPYSTQVEIEDFYEEENIIR-IRAIIYVER 236
Query: 349 NSQKIILIGK 358
+SQK I+IG+
Sbjct: 237 SSQKGIIIGE 246
>gi|430881496|ref|ZP_19483993.1| GTPase Era [Enterococcus faecium E1575]
gi|430556931|gb|ELA96418.1| GTPase Era [Enterococcus faecium E1575]
Length = 299
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I++NK QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSNKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|317128319|ref|YP_004094601.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522]
gi|315473267|gb|ADU29870.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522]
Length = 298
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR+RI G+ + Q+I DTPGI
Sbjct: 4 KSGFVALIGRPNVGKSTLLNEVLGQKIAIMSDKAQTTRNRIQGVYTEDRGQVIFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L MMK ++ D I+ LVDA + + DE + E + PI L++
Sbjct: 64 HKPK-HRLGDFMMKIAQTTLKEVDAILFLVDAKEGRGKGDEFIMEKL--KHVTTPIFLIV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P E+ ++ Y K + EVIP+SA YG+ VE + D + L GP YY +DI
Sbjct: 121 NKIDEVHPDELFLLIDDYRKRFEFTEVIPISALYGNNVETLLDQVFKYLDEGPQYYSEDI 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPERF + E+IREK+ EVP++ V + K R ++ IVVE++SQK
Sbjct: 181 VTDHPERFLMAEMIREKVLHLTHEEVPHSIAVEIEQIKRRENETVYVGAVIVVERSSQKG 240
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 241 IVIGKQGKLL 250
>gi|344202151|ref|YP_004787294.1| GTP-binding protein Era-like-protein [Muricauda ruestringensis DSM
13258]
gi|343954073|gb|AEM69872.1| GTP-binding protein Era-like-protein [Muricauda ruestringensis DSM
13258]
Length = 293
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 162/247 (65%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQMILSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K ++ L S MM V+SA +AD ++ +V+ + + DE + + K+P+LL+
Sbjct: 63 II-KPVYELQSSMMDFVKSAFEDADVLLYMVEIGEKALK-DESFFKKI--QNSKIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + ++++++++ E+ P+SA V ++ + IL LP P +YPKD
Sbjct: 119 LNKIDTSDQQILEEQMQYWQEQLPNAEIHPISALENFNVTEVFNRILELLPEAPPFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV E IREKI + Y+ E+PY+ +V + +D I++ I+VE+++
Sbjct: 179 QITDKPERFFVNETIREKILLHYKKEIPYSVEVETEEF---LEDEDIIRIRSVIMVERDT 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|288555745|ref|YP_003427680.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4]
gi|288546905|gb|ADC50788.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4]
Length = 303
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + E Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNYVIGQKIAIMSDKPQTTRNKIQGVYTSNESQVVFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L MMK ++ D I+ +VDA +A +E + E + + K P+ LV+
Sbjct: 69 HKPK-HKLGDFMMKVAQNTLREVDLILYVVDAGEAFGSGEEFIIERL--KETKTPVFLVI 125
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++P ++ +E Y D EVIPVSA G V + + I+ L GP YYP D
Sbjct: 126 NKIDKVQPDDLLGIIETYRTKFDFTEVIPVSALQGSNVPTLMEQIVDHLEEGPQYYPSDQ 185
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPERF V E+IREK+ R E+P++ V + K R +I I+VE+ SQK
Sbjct: 186 VTDHPERFIVAELIREKVLHLTREEIPHSVAVVIEQMKRRDNDMIYIGATIIVERTSQKG 245
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 246 IIIGKQGSML 255
>gi|347753168|ref|YP_004860733.1| GTP-binding protein Era [Bacillus coagulans 36D1]
gi|347585686|gb|AEP01953.1| GTP-binding protein Era [Bacillus coagulans 36D1]
Length = 302
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 157/256 (61%), Gaps = 6/256 (2%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
P +KSG+++++G+PNVGKST NQ++GQK++I+++KPQTTR++I G+ + + QMI D
Sbjct: 3 QPTYKSGFISIIGRPNVGKSTFINQVVGQKIAIMSDKPQTTRNKIQGVYTADDAQMIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI + K H L M+K+ D I+ +V+A + R DE + E + + P+
Sbjct: 63 TPGIHKPK-HKLGDFMVKSATDTLKEVDLILFMVNAEEKRGRGDEYIIELL--KHVRTPV 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK DL+ P ++ +E Y+ EV+P+SA G+ V + D I LP GP YY
Sbjct: 120 FLVINKIDLVHPDDLLAFIEQYKDLYPFREVVPISALGGNNVSRLLDTIKAYLPEGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVE 347
P D V++HPERF + E+IREK R EVP++ V V+ R KD I V IVVE
Sbjct: 180 PADQVTDHPERFIISELIREKALQLTREEVPHSIAV-VIEKMEREENKDVIHVMATIVVE 238
Query: 348 KNSQKIILIGKVSPFL 363
+ SQK I+IG+ L
Sbjct: 239 RPSQKGIIIGRQGSML 254
>gi|310643039|ref|YP_003947797.1| GTP-binding protein Era [Paenibacillus polymyxa SC2]
gi|309247989|gb|ADO57556.1| GTP-binding protein era-like protein [Paenibacillus polymyxa SC2]
gi|392303845|emb|CCI70208.1| era-like GTP-binding protein [Paenibacillus polymyxa M1]
Length = 300
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 154/250 (61%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M S G + ++ L+DA + D + E + + K P++LVL
Sbjct: 67 HKRQSKLGDYMNQTAFNSLG-EVEAVLFLIDAAEGLGGGDRFIAEQL--KQVKTPVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+P + +E Y K D E++P+SAK G+ V + D + LP GP YYP D
Sbjct: 124 NKIDRIEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVNTLLDQVQKYLPEGPQYYPDDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F + E++REKI R EVP++ V + K + I I VE++SQK
Sbjct: 184 ITDHPEQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQENGVVHIMAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGAML 253
>gi|365961173|ref|YP_004942740.1| GTPase Era [Flavobacterium columnare ATCC 49512]
gi|365737854|gb|AEW86947.1| GTPase Era [Flavobacterium columnare ATCC 49512]
Length = 294
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 158/247 (63%), Gaps = 7/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+GYV ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G +Q++ DTP
Sbjct: 2 SHKAGYVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDNFQILFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L S MM V+SA +AD ++ +V+ + + + + + K+P+LL
Sbjct: 62 GII-KPAYELQSSMMDFVKSAFEDADILIYMVEIGEKSLKDEAFFNKII---HSKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+LNK D ++ +++ W EK + E+ P+SA ++ + D I+ LP YYP
Sbjct: 118 LLNKIDKSNQEQLEEQVTIWKEKVPNA-EIFPISALENFNIQAVFDRIIELLPQSEPYYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV E IREKI + Y E+PYAC+V +K T I+ I+VE+++
Sbjct: 177 KDALTDKPERFFVNEAIREKILLNYDKEIPYACEVETEEFKEDDTIIR-IRTLIMVERDT 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|429767135|ref|ZP_19299348.1| ribosome biogenesis GTPase Era [Clostridium celatum DSM 1785]
gi|429181567|gb|EKY22724.1| ribosome biogenesis GTPase Era [Clostridium celatum DSM 1785]
Length = 296
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V ++G+PNVGKSTL NQ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DT G
Sbjct: 2 YKSGFVTIVGRPNVGKSTLTNQIMGEKLSIVSNKPQTTRNNIQTILTGEDYQIVFVDTSG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K + D M+ S D ++ L++ C R D+ + E + K K P+ LV
Sbjct: 62 IHKPKNKLGDYMVNSATESIK-EVDLVLFLINPCDEIGRGDKFILEAI--KKQKAPVFLV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++AK L+ Y K D E++P+SA G V+ + ++ K+P GP YYP+D
Sbjct: 119 VNKVDENSHEKVAKTLDMYSKEYDFAEIVPISALKGKNVDTLVRLMVEKMPEGPQYYPED 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++++ ERF V EI+REK R+E+P+ V+++ K I+V+++ EK+S K
Sbjct: 179 MITDANERFIVAEIVREKTLKNLRDEIPHGIAVDIIQMKQNEKGTYHIEVDLICEKDSHK 238
Query: 353 IILIGK 358
I+IGK
Sbjct: 239 GIIIGK 244
>gi|16800567|ref|NP_470835.1| GTP-binding protein Era [Listeria innocua Clip11262]
gi|422412950|ref|ZP_16489909.1| GTP-binding protein Era [Listeria innocua FSL S4-378]
gi|422415965|ref|ZP_16492922.1| GTP-binding protein Era [Listeria innocua FSL J1-023]
gi|21263591|sp|Q92BP8.1|ERA_LISIN RecName: Full=GTPase Era
gi|16413972|emb|CAC96730.1| lin1499 [Listeria innocua Clip11262]
gi|313618893|gb|EFR90758.1| GTP-binding protein Era [Listeria innocua FSL S4-378]
gi|313623743|gb|EFR93885.1| GTP-binding protein Era [Listeria innocua FSL J1-023]
Length = 301
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEDLIKLIEQYRELMDFEEIIPISALEGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|390943152|ref|YP_006406913.1| GTP-binding protein Era [Belliella baltica DSM 15883]
gi|390416580|gb|AFL84158.1| GTP-binding protein Era [Belliella baltica DSM 15883]
Length = 296
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 164/252 (65%), Gaps = 9/252 (3%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ HK+G+V ++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+G+ + +YQ++
Sbjct: 2 TENTHKAGFVNIVGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGLINDDDYQIVFS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+++ K + L MM V + +AD I+ + D + E I++++E+ ++ +P
Sbjct: 62 DTPGMLKPK-YELHKNMMSFVHMSLEDADVILFVTDLFETDEEIEDVIEK---INQSGVP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL K G++ + ++ + + VIP+SA E I IL +LP+ P +
Sbjct: 118 VLLVINKVDLSKEGQLEEVTAYWTQRIKTEAVIPISATESFNTERILQEILDRLPVHPPF 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVV 346
Y K +++ PERFF EI+REKIF+ Y+ E+PY+ +V + + ++ I+V I V
Sbjct: 178 YDKAELTDKPERFFASEIVREKIFLNYKKEIPYSTEVAIEDFYEE---ENIIRVRAIIYV 234
Query: 347 EKNSQKIILIGK 358
E+NSQK I+IG+
Sbjct: 235 ERNSQKGIIIGE 246
>gi|239637621|ref|ZP_04678593.1| GTP-binding protein Era [Staphylococcus warneri L37603]
gi|239596839|gb|EEQ79364.1| GTP-binding protein Era [Staphylococcus warneri L37603]
Length = 299
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK + D I+ +V+ + R DE + + + D K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDLK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+++ D E++P+SA G V+ D + + LP GP YYP D
Sbjct: 121 LNKIDLVHPDALMPKIEKYQEYMDFTEIVPISALEGLNVDHFIDVLKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|406589115|ref|ZP_11063559.1| GTP-binding protein Era [Enterococcus sp. GMD1E]
gi|410936827|ref|ZP_11368690.1| GTP-binding protein Era [Enterococcus sp. GMD5E]
gi|430825784|ref|ZP_19443984.1| GTPase Era [Enterococcus faecium E0164]
gi|404471361|gb|EKA15899.1| GTP-binding protein Era [Enterococcus sp. GMD1E]
gi|410734857|gb|EKQ76775.1| GTP-binding protein Era [Enterococcus sp. GMD5E]
gi|430445681|gb|ELA55403.1| GTPase Era [Enterococcus faecium E0164]
Length = 299
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMSFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|116872893|ref|YP_849674.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461073|sp|A0AIR3.1|ERA_LISW6 RecName: Full=GTPase Era
gi|116741771|emb|CAK20895.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 301
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEDLFKLIEQYRELLDFEEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|315282359|ref|ZP_07870786.1| GTP-binding protein Era [Listeria marthii FSL S4-120]
gi|313613991|gb|EFR87708.1| GTP-binding protein Era [Listeria marthii FSL S4-120]
Length = 301
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRELMDFEEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|366053203|ref|ZP_09450925.1| GTPase Era [Lactobacillus suebicus KCTC 3549]
Length = 301
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 158/254 (62%), Gaps = 3/254 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL NQ+IGQK++I++N QTTR++I GI + + Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNQVIGQKVAIMSNVAQTTRNKIQGIYTSNDAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI + + + D M ++ SA D I+ +V+A + D + E + K PI
Sbjct: 63 TPGIHKPQTKLGD-FMERSALSALDEVDAILFVVNATENKGAGDNFIIERL--KKVHQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D +KP + YE+ D +++P+SA G+ V+ + + ++ LP GP YY
Sbjct: 120 YLVINKIDQVKPERLLDIKAQYEQSLDYQKIVPISALNGNNVDQLIEELVNHLPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D VS+HPERF VGE+IREK+F R EVP++ ++V K R I I+VE+
Sbjct: 180 PADQVSDHPERFVVGEMIREKVFQLTRQEVPHSVAIDVEQIKRRDDRTIDISATIIVERP 239
Query: 350 SQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 GQKGIIIGKGGSML 253
>gi|366085898|ref|ZP_09452383.1| GTPase Era [Lactobacillus zeae KCTC 3804]
Length = 300
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 160/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KD 225
I + K + LD M K S D I+ +V A DE ++G GD +
Sbjct: 64 IHKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L+LNK DL+KP ++ +E Y+ D +V P+SA G+ V+D+ + LP+G
Sbjct: 114 KKPVYLILNKIDLVKPDDLLPLIESYQHDYDFAQVFPISATMGNNVDDLLTSLTAALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREK+ R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKVLELTRDEVPHATAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|414160933|ref|ZP_11417196.1| GTPase Era [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876612|gb|EKS24510.1| GTPase Era [Staphylococcus simulans ACS-120-V-Sch1]
Length = 299
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N+++G K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIQGVMTEDDAQIIFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D ++ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEVDAVIFMVNADEKIGRGDEYIMEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL+ P EI +E Y+K+ D E +P+SA G VE + + + LP GP YYP
Sbjct: 121 INKIDLVHPDEIMPIIESYQKYMDFSETVPMSALEGLNVEHFIEVLKSYLPEGPQYYPDG 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGE+IREKI E+P++ +VNV + K I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGELIREKILHLTSEEIPHSIEVNVDRMVKQSEDKVRIEATIFVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|423100546|ref|ZP_17088253.1| ribosome biogenesis GTPase Era [Listeria innocua ATCC 33091]
gi|370792770|gb|EHN60613.1| ribosome biogenesis GTPase Era [Listeria innocua ATCC 33091]
Length = 301
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEDLIKLIEQYRELMDFEEIIPISALEGSNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|159484917|ref|XP_001700498.1| ERA-like protein, small ras-type GTPase [Chlamydomonas reinhardtii]
gi|158272250|gb|EDO98053.1| ERA-like protein, small ras-type GTPase [Chlamydomonas reinhardtii]
Length = 439
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 148/250 (59%), Gaps = 22/250 (8%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P H+SGYVAV+GKPN GKSTL N ++GQKLSIVT KPQTTRHR++GI S +YQMIL+DT
Sbjct: 154 PGHRSGYVAVIGKPNAGKSTLINALVGQKLSIVTYKPQTTRHRVMGILSERDYQMILFDT 213
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PG+IEKK L+ MM V + ++ I+ +VD+ P+ + + G G + P+
Sbjct: 214 PGVIEKKRTKLEERMMAAVVHSIKESEAIIAVVDSADKPKEALAMFQPGEG--WNGPPMA 271
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
++LNK DL+ ++ V SA++ G+ +R W +++LP GP Y
Sbjct: 272 VLLNKADLLSEEQV---------------VFVGSAEHKDGLGALRAWAVSRLPEGPTLYS 316
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA---KDFIQVEIVVE 347
K ++ R + E++F+ EVPY QV + + R TA KDFI EIVVE
Sbjct: 317 KPRMTR--TRLKSRAVPAERVFLHCEQEVPYCSQVLIKEFTERRTASGQKDFISAEIVVE 374
Query: 348 KNSQKIILIG 357
K SQK ILIG
Sbjct: 375 KESQKGILIG 384
>gi|336395489|ref|ZP_08576888.1| GTPase Era [Lactobacillus farciminis KCTC 3681]
Length = 303
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 157/253 (62%), Gaps = 4/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+VA++G+PNVGKST N++I ++++I + K QTTR++I GI + E Q+I DTP
Sbjct: 4 NFKSGFVAIIGRPNVGKSTFMNRIIKEQIAITSPKAQTTRNKIQGIYTDDERQIIFLDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K + LD M K SA D ++ + +A + D+ + E + K K P+ L
Sbjct: 64 GI-HKPHNDLDQYMDKAAISALKEVDAVLFMTEAGEQAGPGDKFIIEEL--KKVKAPVFL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DLI P E+A +++ Y+ D E+IP+SA G+ V+D+ D + LP+GP YY
Sbjct: 121 ILNKIDLINPDEMAPQIDEYKDLMDFAEIIPISATNGNNVDDLIDSLTKALPVGPQYYAD 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 350
D +++HPE F VGE+IREKI R+E+P++ V V S R A I+ I VE++S
Sbjct: 181 DQITDHPEYFIVGELIREKILEDTRDEIPHSIAVVVESMNQRSEAGKLQIEAYIYVERDS 240
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 241 QKPIVIGKGGSML 253
>gi|217964392|ref|YP_002350070.1| GTP-binding protein Era [Listeria monocytogenes HCC23]
gi|290894223|ref|ZP_06557192.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071]
gi|386008233|ref|YP_005926511.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L99]
gi|386026834|ref|YP_005947610.1| putative GTP binding protein Era [Listeria monocytogenes M7]
gi|404407900|ref|YP_006690615.1| GTP-binding protein [Listeria monocytogenes SLCC2376]
gi|422809543|ref|ZP_16857954.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-208]
gi|254783659|sp|B8DE49.1|ERA_LISMH RecName: Full=GTPase Era
gi|217333662|gb|ACK39456.1| GTP-binding protein Era [Listeria monocytogenes HCC23]
gi|290556220|gb|EFD89765.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071]
gi|307571043|emb|CAR84222.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L99]
gi|336023415|gb|AEH92552.1| putative GTP binding protein Era [Listeria monocytogenes M7]
gi|378753157|gb|EHY63742.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-208]
gi|404242049|emb|CBY63449.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2376]
Length = 301
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMEFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|39997324|ref|NP_953275.1| GTPase Era [Geobacter sulfurreducens PCA]
gi|409912668|ref|YP_006891133.1| GTP-binding protein Era [Geobacter sulfurreducens KN400]
gi|39984215|gb|AAR35602.1| GTP-binding protein Era [Geobacter sulfurreducens PCA]
gi|298506261|gb|ADI84984.1| GTP-binding protein Era [Geobacter sulfurreducens KN400]
Length = 299
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 159/260 (61%), Gaps = 22/260 (8%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+V+++G+PNVGKSTL N+++G+K+ I ++KPQTTR+RI GI + P Q++ DTPGI
Sbjct: 8 RSGFVSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL------ 227
+ L+ M++ S+ D +++LV+A +AP GD + ++
Sbjct: 68 HHAR-SRLNKFMVEEALSSIREVDLVMLLVEANRAP-----------GDQEREIAGLLPS 115
Query: 228 ---PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
P+ LV+NK DLI P +A++L Y + EV+PVSA+ G VE + + + LP
Sbjct: 116 VNVPVFLVVNKIDLIDPDILAERLTAYAELFPFREVVPVSAETGENVERLVEVVRDTLPE 175
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVE 343
GP Y+P DI+++ PERF V EI+REK+F R+E+PY+ V V S++ R I
Sbjct: 176 GPVYFPDDILTDLPERFIVAEIVREKVFRLTRDEIPYSTAVEVDSFREREDGGLVSISAT 235
Query: 344 IVVEKNSQKIILIGKVSPFL 363
I VE++SQK I+IG+ L
Sbjct: 236 ITVERDSQKGIIIGRKGAML 255
>gi|374596875|ref|ZP_09669879.1| GTP-binding protein Era-like-protein [Gillisia limnaea DSM 15749]
gi|373871514|gb|EHQ03512.1| GTP-binding protein Era-like-protein [Gillisia limnaea DSM 15749]
Length = 293
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 160/246 (65%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H++G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPG
Sbjct: 3 HRAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQVILSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM V+SA +AD ++ +V+ + + + + V ++P+LL+
Sbjct: 63 II-KPAYDLQQSMMDFVKSAFEDADILIYMVEIGEQALKDEAFFNKIVN---SQIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D+ ++ ++++ W EK + E+ P+SA G V ++ + I+ LP PA+YPK
Sbjct: 119 LNKIDISNQEQLEEQVQLWTEKVPNA-EIYPISALQGFNVSEVFNRIVELLPESPAFYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFFV EIIREKI M Y+ E+PY+ +++ + + I+VE+ +Q
Sbjct: 178 DQLTDKPERFFVNEIIREKILMHYKKEIPYSVEIDTEEFFEEEEIIRMRSI-IMVERETQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|410729521|ref|ZP_11367598.1| GTP-binding protein Era [Clostridium sp. Maddingley MBC34-26]
gi|410595623|gb|EKQ50324.1| GTP-binding protein Era [Clostridium sp. Maddingley MBC34-26]
Length = 296
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 152/245 (62%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFVSIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + R D+ + E + D K PI LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKESTKDVDLVLFLTNPDDEIGRGDKFILESLRDKK--CPIFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK LE Y K D E+IP+SA G V+ + + + +P GP YYP D+
Sbjct: 120 NKVDENTQDRVAKTLEMYSKEFDFAEMIPISAIKGKNVDRLVELMKKAMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVQEKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEIGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|213961788|ref|ZP_03390054.1| GTP-binding protein Era [Capnocytophaga sputigena Capno]
gi|213955577|gb|EEB66893.1| GTP-binding protein Era [Capnocytophaga sputigena Capno]
Length = 293
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 159/245 (64%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ +V+ + E DE+ + +K ++P+LL+
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-ELKDEVFFNRI--NKLEVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +++ ++++ E+ P+SA E + + I+ LP PA++PKD
Sbjct: 118 INKVDTSDQSTLEEQVAYWKEKVPRAEIFPISALRNFQTEVVFNRIIELLPESPAFFPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK
Sbjct: 178 QLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|47567864|ref|ZP_00238572.1| GTP-binding protein Era [Bacillus cereus G9241]
gi|47555541|gb|EAL13884.1| GTP-binding protein Era [Bacillus cereus G9241]
Length = 301
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 159/251 (63%), Gaps = 3/251 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG
Sbjct: 6 YKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+K ++ D ++ +V+A + R +E + E + + K P+ LV
Sbjct: 66 IHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ + ++ Y K D E++P+SA G+ VE + I LP GP YYP +
Sbjct: 123 INKIDQVHPEQLLELIDQYRKLHDFAEIVPISALDGNNVESLIGTIKKYLPEGPQYYPDN 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQK
Sbjct: 183 QVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERPSQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGKML 253
>gi|228476104|ref|ZP_04060812.1| GTP-binding protein Era [Staphylococcus hominis SK119]
gi|314936312|ref|ZP_07843659.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80]
gi|418619982|ref|ZP_13182793.1| GTP-binding protein Era [Staphylococcus hominis VCU122]
gi|228269927|gb|EEK11407.1| GTP-binding protein Era [Staphylococcus hominis SK119]
gi|313654931|gb|EFS18676.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80]
gi|374823545|gb|EHR87540.1| GTP-binding protein Era [Staphylococcus hominis VCU122]
Length = 299
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTREDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D E++P+SA G V+ D + LP GP YYP D
Sbjct: 121 LNKIDLVHPDALMPKIEKYKTYMDFTEIVPISALEGLNVDHFIDVLKDYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKESEERVRIEATIFVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|417643133|ref|ZP_12293195.1| ribosome biogenesis GTPase Era [Staphylococcus warneri VCU121]
gi|330686118|gb|EGG97739.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU121]
Length = 299
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I GI + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGIMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK + D I+ +V+ + R DE + + + D K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDLK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+++ + E++P+SA G V+ D + + LP GP YYP D
Sbjct: 121 LNKIDLVHPDALMPKIEKYQEYMNFTEIVPISALEGLNVDHFIDVLKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|430827881|ref|ZP_19446011.1| GTPase Era [Enterococcus faecium E0269]
gi|431301340|ref|ZP_19507659.1| GTPase Era [Enterococcus faecium E1626]
gi|430483962|gb|ELA60997.1| GTPase Era [Enterococcus faecium E0269]
gi|430580530|gb|ELB18997.1| GTPase Era [Enterococcus faecium E1626]
Length = 299
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|293556346|ref|ZP_06674927.1| GTP-binding protein Era [Enterococcus faecium E1039]
gi|291601413|gb|EFF31684.1| GTP-binding protein Era [Enterococcus faecium E1039]
Length = 299
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|149371535|ref|ZP_01890951.1| putative GTP-binding protein [unidentified eubacterium SCB49]
gi|149355162|gb|EDM43722.1| putative GTP-binding protein [unidentified eubacterium SCB49]
Length = 293
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 162/247 (65%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QM+L DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMLLSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ LV+ + + DE + + + K+P+LL+
Sbjct: 63 II-KPAYELQASMMDFVKSAFEDADVLLYLVELGEKDLK-DEKFFDKITNA--KIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D ++ + L +++ V +SA GV+++ + I+ LP P +YPKD
Sbjct: 119 LNKIDQGNEEQLGEALTFWQAKVPNATVFAISALENFGVQEVFNHIIELLPESPPFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV EIIREKI M Y+ E+PY+ +++ + ++ I++ I+VE+N+
Sbjct: 179 QLTDKPERFFVNEIIREKILMHYKKEIPYSVEIDTEEF---FEDENIIRIRSIIMVERNT 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|225010005|ref|ZP_03700477.1| GTP-binding protein Era [Flavobacteria bacterium MS024-3C]
gi|225005484|gb|EEG43434.1| GTP-binding protein Era [Flavobacteria bacterium MS024-3C]
Length = 295
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 162/247 (65%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPG
Sbjct: 4 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMILSDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD +V +V+ + + DE+ + + K+P+LL+
Sbjct: 64 II-KPAYELQASMMDFVKSAFEDADILVYMVELGEKTLK-DELFFKKL--QGSKIPVLLL 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D+ + + +++ ++++ E+ P+SA + V+++ ++ +P P YYPKD
Sbjct: 120 LNKMDISEQSILEEQIAYWQEQLPNAEIHPISALHNFNVKEVFLRLVELMPAAPPYYPKD 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV E IREKI Y+ E+PYA ++ + D I++ I+VE++S
Sbjct: 180 QLTDKPERFFVNETIREKILQHYKKEIPYAVEIETEEF---LEDDDIIRMRAVIMVERDS 236
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 237 QKGIIIG 243
>gi|69247285|ref|ZP_00604286.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecium DO]
gi|227551968|ref|ZP_03982017.1| GTP-binding protein Era [Enterococcus faecium TX1330]
gi|257882780|ref|ZP_05662433.1| GTP-binding protein Era [Enterococcus faecium 1,231,502]
gi|257884088|ref|ZP_05663741.1| GTP-binding protein Era [Enterococcus faecium 1,231,501]
gi|257886866|ref|ZP_05666519.1| GTP-binding protein Era [Enterococcus faecium 1,141,733]
gi|257890445|ref|ZP_05670098.1| GTP-binding protein Era [Enterococcus faecium 1,231,410]
gi|257893051|ref|ZP_05672704.1| GTP-binding protein Era [Enterococcus faecium 1,231,408]
gi|257895440|ref|ZP_05675093.1| GTP-binding protein Era [Enterococcus faecium Com12]
gi|257898046|ref|ZP_05677699.1| GTP-binding protein Era [Enterococcus faecium Com15]
gi|260559560|ref|ZP_05831740.1| GTP-binding protein Era [Enterococcus faecium C68]
gi|261208624|ref|ZP_05923061.1| GTP-binding protein Era [Enterococcus faecium TC 6]
gi|289566737|ref|ZP_06447151.1| GTP-binding protein Era [Enterococcus faecium D344SRF]
gi|293378307|ref|ZP_06624476.1| GTP-binding protein Era [Enterococcus faecium PC4.1]
gi|293559428|ref|ZP_06675967.1| GTP-binding protein Era [Enterococcus faecium E1162]
gi|293568654|ref|ZP_06679969.1| GTP-binding protein Era [Enterococcus faecium E1071]
gi|294616318|ref|ZP_06696111.1| GTP-binding protein Era [Enterococcus faecium E1636]
gi|294622998|ref|ZP_06701887.1| GTP-binding protein Era [Enterococcus faecium U0317]
gi|314939540|ref|ZP_07846768.1| GTP-binding protein Era [Enterococcus faecium TX0133a04]
gi|314942705|ref|ZP_07849531.1| GTP-binding protein Era [Enterococcus faecium TX0133C]
gi|314948957|ref|ZP_07852323.1| GTP-binding protein Era [Enterococcus faecium TX0082]
gi|314953304|ref|ZP_07856232.1| GTP-binding protein Era [Enterococcus faecium TX0133A]
gi|314993384|ref|ZP_07858749.1| GTP-binding protein Era [Enterococcus faecium TX0133B]
gi|314995734|ref|ZP_07860823.1| GTP-binding protein Era [Enterococcus faecium TX0133a01]
gi|383329309|ref|YP_005355193.1| GTP-binding protein Era [Enterococcus faecium Aus0004]
gi|389869158|ref|YP_006376581.1| GTP-binding protein Era [Enterococcus faecium DO]
gi|415892201|ref|ZP_11549882.1| GTP-binding protein Era [Enterococcus faecium E4453]
gi|416135787|ref|ZP_11598549.1| GTP-binding protein Era [Enterococcus faecium E4452]
gi|424766310|ref|ZP_18193663.1| ribosome biogenesis GTPase Era [Enterococcus faecium TX1337RF]
gi|424785517|ref|ZP_18212319.1| ribosome biogenesis GTPase Era [Enterococcus faecium V689]
gi|424794056|ref|ZP_18220082.1| ribosome biogenesis GTPase Era [Enterococcus faecium S447]
gi|424849296|ref|ZP_18273753.1| ribosome biogenesis GTPase Era [Enterococcus faecium R501]
gi|424855975|ref|ZP_18280261.1| ribosome biogenesis GTPase Era [Enterococcus faecium R499]
gi|424866925|ref|ZP_18290743.1| ribosome biogenesis GTPase Era [Enterococcus faecium R497]
gi|424938519|ref|ZP_18354308.1| ribosome biogenesis GTPase Era [Enterococcus faecium R496]
gi|424952872|ref|ZP_18367871.1| ribosome biogenesis GTPase Era [Enterococcus faecium R494]
gi|424955795|ref|ZP_18370609.1| ribosome biogenesis GTPase Era [Enterococcus faecium R446]
gi|424960124|ref|ZP_18374669.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1986]
gi|424966942|ref|ZP_18380686.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1140]
gi|424971266|ref|ZP_18384709.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1139]
gi|424978493|ref|ZP_18391406.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1123]
gi|424985647|ref|ZP_18398110.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV69]
gi|424989357|ref|ZP_18401624.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV38]
gi|424990579|ref|ZP_18402787.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV26]
gi|424993316|ref|ZP_18405315.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV168]
gi|424997881|ref|ZP_18409609.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV165]
gi|425001177|ref|ZP_18412701.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV161]
gi|425003925|ref|ZP_18415259.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV102]
gi|425006440|ref|ZP_18417616.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV1]
gi|425010261|ref|ZP_18421225.1| ribosome biogenesis GTPase Era [Enterococcus faecium E422]
gi|425013179|ref|ZP_18423920.1| ribosome biogenesis GTPase Era [Enterococcus faecium E417]
gi|425016799|ref|ZP_18427343.1| ribosome biogenesis GTPase Era [Enterococcus faecium C621]
gi|425032828|ref|ZP_18437839.1| ribosome biogenesis GTPase Era [Enterococcus faecium 515]
gi|425035339|ref|ZP_18440182.1| ribosome biogenesis GTPase Era [Enterococcus faecium 514]
gi|425037416|ref|ZP_18442085.1| ribosome biogenesis GTPase Era [Enterococcus faecium 513]
gi|425041604|ref|ZP_18445997.1| ribosome biogenesis GTPase Era [Enterococcus faecium 511]
gi|425048968|ref|ZP_18452848.1| ribosome biogenesis GTPase Era [Enterococcus faecium 509]
gi|425055532|ref|ZP_18459005.1| ribosome biogenesis GTPase Era [Enterococcus faecium 505]
gi|425059033|ref|ZP_18462385.1| ribosome biogenesis GTPase Era [Enterococcus faecium 504]
gi|425060733|ref|ZP_18464014.1| ribosome biogenesis GTPase Era [Enterococcus faecium 503]
gi|427396462|ref|ZP_18889221.1| GTPase Era [Enterococcus durans FB129-CNAB-4]
gi|430819615|ref|ZP_19438266.1| GTPase Era [Enterococcus faecium E0045]
gi|430822815|ref|ZP_19441390.1| GTPase Era [Enterococcus faecium E0120]
gi|430831011|ref|ZP_19449064.1| GTPase Era [Enterococcus faecium E0333]
gi|430834200|ref|ZP_19452207.1| GTPase Era [Enterococcus faecium E0679]
gi|430835537|ref|ZP_19453527.1| GTPase Era [Enterococcus faecium E0680]
gi|430838396|ref|ZP_19456342.1| GTPase Era [Enterococcus faecium E0688]
gi|430841736|ref|ZP_19459654.1| GTPase Era [Enterococcus faecium E1007]
gi|430843749|ref|ZP_19461648.1| GTPase Era [Enterococcus faecium E1050]
gi|430847776|ref|ZP_19465610.1| GTPase Era [Enterococcus faecium E1133]
gi|430849313|ref|ZP_19467094.1| GTPase Era [Enterococcus faecium E1185]
gi|430851962|ref|ZP_19469697.1| GTPase Era [Enterococcus faecium E1258]
gi|430855187|ref|ZP_19472896.1| GTPase Era [Enterococcus faecium E1392]
gi|430857849|ref|ZP_19475482.1| GTPase Era [Enterococcus faecium E1552]
gi|430860504|ref|ZP_19478103.1| GTPase Era [Enterococcus faecium E1573]
gi|430865494|ref|ZP_19481129.1| GTPase Era [Enterococcus faecium E1574]
gi|430947010|ref|ZP_19485790.1| GTPase Era [Enterococcus faecium E1576]
gi|431003731|ref|ZP_19488829.1| GTPase Era [Enterococcus faecium E1578]
gi|431033298|ref|ZP_19491144.1| GTPase Era [Enterococcus faecium E1590]
gi|431077595|ref|ZP_19495060.1| GTPase Era [Enterococcus faecium E1604]
gi|431112165|ref|ZP_19497541.1| GTPase Era [Enterococcus faecium E1613]
gi|431149444|ref|ZP_19499302.1| GTPase Era [Enterococcus faecium E1620]
gi|431230120|ref|ZP_19502323.1| GTPase Era [Enterococcus faecium E1622]
gi|431252043|ref|ZP_19504101.1| GTPase Era [Enterococcus faecium E1623]
gi|431374483|ref|ZP_19510171.1| GTPase Era [Enterococcus faecium E1627]
gi|431414402|ref|ZP_19512221.1| GTPase Era [Enterococcus faecium E1630]
gi|431513954|ref|ZP_19516002.1| GTPase Era [Enterococcus faecium E1634]
gi|431586307|ref|ZP_19520822.1| GTPase Era [Enterococcus faecium E1861]
gi|431635673|ref|ZP_19523158.1| GTPase Era [Enterococcus faecium E1904]
gi|431741018|ref|ZP_19529926.1| GTPase Era [Enterococcus faecium E2039]
gi|431742830|ref|ZP_19531714.1| GTPase Era [Enterococcus faecium E2071]
gi|431746514|ref|ZP_19535339.1| GTPase Era [Enterococcus faecium E2134]
gi|431750204|ref|ZP_19538929.1| GTPase Era [Enterococcus faecium E2297]
gi|431752278|ref|ZP_19540961.1| GTPase Era [Enterococcus faecium E2620]
gi|431757117|ref|ZP_19545748.1| GTPase Era [Enterococcus faecium E3083]
gi|431759614|ref|ZP_19548225.1| GTPase Era [Enterococcus faecium E3346]
gi|431762381|ref|ZP_19550943.1| GTPase Era [Enterococcus faecium E3548]
gi|431764432|ref|ZP_19552972.1| GTPase Era [Enterococcus faecium E4215]
gi|431767506|ref|ZP_19555953.1| GTPase Era [Enterococcus faecium E1321]
gi|431771118|ref|ZP_19559504.1| GTPase Era [Enterococcus faecium E1644]
gi|431772560|ref|ZP_19560898.1| GTPase Era [Enterococcus faecium E2369]
gi|431775465|ref|ZP_19563738.1| GTPase Era [Enterococcus faecium E2560]
gi|431780088|ref|ZP_19568273.1| GTPase Era [Enterococcus faecium E4389]
gi|431781617|ref|ZP_19569761.1| GTPase Era [Enterococcus faecium E6012]
gi|431786007|ref|ZP_19574025.1| GTPase Era [Enterococcus faecium E6045]
gi|447912301|ref|YP_007393713.1| GTP-binding protein Era [Enterococcus faecium NRRL B-2354]
gi|68194907|gb|EAN09377.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecium DO]
gi|227178873|gb|EEI59845.1| GTP-binding protein Era [Enterococcus faecium TX1330]
gi|257818438|gb|EEV45766.1| GTP-binding protein Era [Enterococcus faecium 1,231,502]
gi|257819926|gb|EEV47074.1| GTP-binding protein Era [Enterococcus faecium 1,231,501]
gi|257822920|gb|EEV49852.1| GTP-binding protein Era [Enterococcus faecium 1,141,733]
gi|257826805|gb|EEV53431.1| GTP-binding protein Era [Enterococcus faecium 1,231,410]
gi|257829430|gb|EEV56037.1| GTP-binding protein Era [Enterococcus faecium 1,231,408]
gi|257832005|gb|EEV58426.1| GTP-binding protein Era [Enterococcus faecium Com12]
gi|257835958|gb|EEV61032.1| GTP-binding protein Era [Enterococcus faecium Com15]
gi|260074228|gb|EEW62550.1| GTP-binding protein Era [Enterococcus faecium C68]
gi|260077126|gb|EEW64846.1| GTP-binding protein Era [Enterococcus faecium TC 6]
gi|289161458|gb|EFD09344.1| GTP-binding protein Era [Enterococcus faecium D344SRF]
gi|291588614|gb|EFF20447.1| GTP-binding protein Era [Enterococcus faecium E1071]
gi|291590832|gb|EFF22548.1| GTP-binding protein Era [Enterococcus faecium E1636]
gi|291597554|gb|EFF28716.1| GTP-binding protein Era [Enterococcus faecium U0317]
gi|291606642|gb|EFF36037.1| GTP-binding protein Era [Enterococcus faecium E1162]
gi|292643171|gb|EFF61312.1| GTP-binding protein Era [Enterococcus faecium PC4.1]
gi|313590006|gb|EFR68851.1| GTP-binding protein Era [Enterococcus faecium TX0133a01]
gi|313592049|gb|EFR70894.1| GTP-binding protein Era [Enterococcus faecium TX0133B]
gi|313594647|gb|EFR73492.1| GTP-binding protein Era [Enterococcus faecium TX0133A]
gi|313598570|gb|EFR77415.1| GTP-binding protein Era [Enterococcus faecium TX0133C]
gi|313641176|gb|EFS05756.1| GTP-binding protein Era [Enterococcus faecium TX0133a04]
gi|313644616|gb|EFS09196.1| GTP-binding protein Era [Enterococcus faecium TX0082]
gi|364092101|gb|EHM34505.1| GTP-binding protein Era [Enterococcus faecium E4452]
gi|364093475|gb|EHM35744.1| GTP-binding protein Era [Enterococcus faecium E4453]
gi|378939003|gb|AFC64075.1| GTP-binding protein Era [Enterococcus faecium Aus0004]
gi|388534407|gb|AFK59599.1| GTP-binding protein Era [Enterococcus faecium DO]
gi|402411049|gb|EJV43429.1| ribosome biogenesis GTPase Era [Enterococcus faecium TX1337RF]
gi|402917163|gb|EJX37971.1| ribosome biogenesis GTPase Era [Enterococcus faecium R501]
gi|402923514|gb|EJX43800.1| ribosome biogenesis GTPase Era [Enterococcus faecium V689]
gi|402927065|gb|EJX47054.1| ribosome biogenesis GTPase Era [Enterococcus faecium S447]
gi|402930910|gb|EJX50522.1| ribosome biogenesis GTPase Era [Enterococcus faecium R499]
gi|402936909|gb|EJX56055.1| ribosome biogenesis GTPase Era [Enterococcus faecium R496]
gi|402938397|gb|EJX57411.1| ribosome biogenesis GTPase Era [Enterococcus faecium R497]
gi|402940379|gb|EJX59210.1| ribosome biogenesis GTPase Era [Enterococcus faecium R494]
gi|402947741|gb|EJX65932.1| ribosome biogenesis GTPase Era [Enterococcus faecium R446]
gi|402948802|gb|EJX66907.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1986]
gi|402955412|gb|EJX72944.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1140]
gi|402959500|gb|EJX76754.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1139]
gi|402961351|gb|EJX78387.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1123]
gi|402965460|gb|EJX82178.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV69]
gi|402968850|gb|EJX85304.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV38]
gi|402979352|gb|EJX95027.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV26]
gi|402982952|gb|EJX98384.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV168]
gi|402984884|gb|EJY00148.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV165]
gi|402987205|gb|EJY02289.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV161]
gi|402990842|gb|EJY05694.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV102]
gi|402997303|gb|EJY11637.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV1]
gi|403000650|gb|EJY14755.1| ribosome biogenesis GTPase Era [Enterococcus faecium E422]
gi|403001674|gb|EJY15710.1| ribosome biogenesis GTPase Era [Enterococcus faecium E417]
gi|403006126|gb|EJY19795.1| ribosome biogenesis GTPase Era [Enterococcus faecium C621]
gi|403011822|gb|EJY25105.1| ribosome biogenesis GTPase Era [Enterococcus faecium 515]
gi|403018411|gb|EJY31099.1| ribosome biogenesis GTPase Era [Enterococcus faecium 514]
gi|403022106|gb|EJY34510.1| ribosome biogenesis GTPase Era [Enterococcus faecium 513]
gi|403025730|gb|EJY37781.1| ribosome biogenesis GTPase Era [Enterococcus faecium 511]
gi|403029508|gb|EJY41260.1| ribosome biogenesis GTPase Era [Enterococcus faecium 509]
gi|403033772|gb|EJY45259.1| ribosome biogenesis GTPase Era [Enterococcus faecium 505]
gi|403036752|gb|EJY48093.1| ribosome biogenesis GTPase Era [Enterococcus faecium 504]
gi|403042317|gb|EJY53278.1| ribosome biogenesis GTPase Era [Enterococcus faecium 503]
gi|425723132|gb|EKU86023.1| GTPase Era [Enterococcus durans FB129-CNAB-4]
gi|430440525|gb|ELA50775.1| GTPase Era [Enterococcus faecium E0045]
gi|430442744|gb|ELA52765.1| GTPase Era [Enterococcus faecium E0120]
gi|430481882|gb|ELA59023.1| GTPase Era [Enterococcus faecium E0333]
gi|430485431|gb|ELA62337.1| GTPase Era [Enterococcus faecium E0679]
gi|430489528|gb|ELA66142.1| GTPase Era [Enterococcus faecium E0680]
gi|430491638|gb|ELA68090.1| GTPase Era [Enterococcus faecium E0688]
gi|430493794|gb|ELA70078.1| GTPase Era [Enterococcus faecium E1007]
gi|430497608|gb|ELA73645.1| GTPase Era [Enterococcus faecium E1050]
gi|430536450|gb|ELA76818.1| GTPase Era [Enterococcus faecium E1133]
gi|430538159|gb|ELA78458.1| GTPase Era [Enterococcus faecium E1185]
gi|430542544|gb|ELA82652.1| GTPase Era [Enterococcus faecium E1258]
gi|430547059|gb|ELA87001.1| GTPase Era [Enterococcus faecium E1552]
gi|430547193|gb|ELA87129.1| GTPase Era [Enterococcus faecium E1392]
gi|430551902|gb|ELA91652.1| GTPase Era [Enterococcus faecium E1573]
gi|430552841|gb|ELA92558.1| GTPase Era [Enterococcus faecium E1574]
gi|430558407|gb|ELA97826.1| GTPase Era [Enterococcus faecium E1576]
gi|430561820|gb|ELB01074.1| GTPase Era [Enterococcus faecium E1578]
gi|430564399|gb|ELB03583.1| GTPase Era [Enterococcus faecium E1590]
gi|430566010|gb|ELB05131.1| GTPase Era [Enterococcus faecium E1604]
gi|430569119|gb|ELB08136.1| GTPase Era [Enterococcus faecium E1613]
gi|430574106|gb|ELB12884.1| GTPase Era [Enterococcus faecium E1622]
gi|430575333|gb|ELB14049.1| GTPase Era [Enterococcus faecium E1620]
gi|430578469|gb|ELB17021.1| GTPase Era [Enterococcus faecium E1623]
gi|430583107|gb|ELB21496.1| GTPase Era [Enterococcus faecium E1627]
gi|430586210|gb|ELB24471.1| GTPase Era [Enterococcus faecium E1634]
gi|430589135|gb|ELB27280.1| GTPase Era [Enterococcus faecium E1630]
gi|430593485|gb|ELB31471.1| GTPase Era [Enterococcus faecium E1861]
gi|430602342|gb|ELB39915.1| GTPase Era [Enterococcus faecium E2039]
gi|430602477|gb|ELB40042.1| GTPase Era [Enterococcus faecium E1904]
gi|430607799|gb|ELB45100.1| GTPase Era [Enterococcus faecium E2071]
gi|430608416|gb|ELB45662.1| GTPase Era [Enterococcus faecium E2134]
gi|430610133|gb|ELB47287.1| GTPase Era [Enterococcus faecium E2297]
gi|430613769|gb|ELB50768.1| GTPase Era [Enterococcus faecium E2620]
gi|430619406|gb|ELB56233.1| GTPase Era [Enterococcus faecium E3083]
gi|430625073|gb|ELB61723.1| GTPase Era [Enterococcus faecium E3548]
gi|430625795|gb|ELB62398.1| GTPase Era [Enterococcus faecium E3346]
gi|430630459|gb|ELB66814.1| GTPase Era [Enterococcus faecium E1321]
gi|430631007|gb|ELB67343.1| GTPase Era [Enterococcus faecium E4215]
gi|430633643|gb|ELB69797.1| GTPase Era [Enterococcus faecium E1644]
gi|430637639|gb|ELB73638.1| GTPase Era [Enterococcus faecium E2369]
gi|430640567|gb|ELB76401.1| GTPase Era [Enterococcus faecium E4389]
gi|430643181|gb|ELB78937.1| GTPase Era [Enterococcus faecium E2560]
gi|430646343|gb|ELB81829.1| GTPase Era [Enterococcus faecium E6045]
gi|430648835|gb|ELB84224.1| GTPase Era [Enterococcus faecium E6012]
gi|445188010|gb|AGE29652.1| GTP-binding protein Era [Enterococcus faecium NRRL B-2354]
Length = 299
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|340616983|ref|YP_004735436.1| GTP-binding protein Era [Zobellia galactanivorans]
gi|339731780|emb|CAZ95045.1| GTP-binding protein Era [Zobellia galactanivorans]
Length = 294
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 160/245 (65%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPG
Sbjct: 4 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM V+SA +AD ++ +V+ + + DE + + + K+P+LL+
Sbjct: 64 II-KPAYELQSSMMNFVKSAFEDADVLLYMVEIGEKALK-DEAFFDKIKN--SKIPVLLL 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + ++++++++ E+ P+SA +++I + I+ LP PAYYPKD
Sbjct: 120 LNKVDTATQELLEEQVQYWQEMLPTVELHPISALSNFNIKNIFERIIELLPEAPAYYPKD 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI M Y+ E+PY+ ++ + V I+VE++SQK
Sbjct: 180 QLTDKPERFFVNETIREKILMHYKKEIPYSVEIETEEFFEDEDIIRMRSV-IMVERDSQK 238
Query: 353 IILIG 357
I+IG
Sbjct: 239 GIIIG 243
>gi|404497170|ref|YP_006721276.1| GTPase Era [Geobacter metallireducens GS-15]
gi|418066668|ref|ZP_12704028.1| GTP-binding protein Era [Geobacter metallireducens RCH3]
gi|123571481|sp|Q39T84.1|ERA_GEOMG RecName: Full=GTPase Era
gi|78194773|gb|ABB32540.1| GTP-binding protein Era [Geobacter metallireducens GS-15]
gi|373560161|gb|EHP86433.1| GTP-binding protein Era [Geobacter metallireducens RCH3]
Length = 298
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 158/252 (62%), Gaps = 6/252 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+V+++G+PNVGKSTL N+++G+K+ I ++KPQTTR+RI GI + P Q++ DTPGI
Sbjct: 7 RSGFVSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNVPGAQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP-ERIDEILEEGVGDHKDKLPILLV 232
+ + L+ M++ SA D ++ LV+A + P E+ EI++ G P+ LV
Sbjct: 67 HQAR-SRLNKYMVEVALSAIREVDLVLFLVEANQKPGEQEQEIIDVLAGATA---PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL + G + +++ Y+ E++P+SA G GV+ + + + LP GP Y+P D
Sbjct: 123 INKVDLTEKGAVLERIAAYKDRYPFREIVPISAGTGDGVDHLVELVRKALPQGPVYFPDD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
I+++ PERF EIIREK+F R+EVPYA V V S+K R I I VE++SQ
Sbjct: 183 ILTDVPERFIAAEIIREKVFRMTRDEVPYATAVEVDSFKEREDGGLVSIAATITVERDSQ 242
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 243 KGIIIGKKGAML 254
>gi|294618704|ref|ZP_06698237.1| GTP-binding protein Era [Enterococcus faecium E1679]
gi|291595047|gb|EFF26391.1| GTP-binding protein Era [Enterococcus faecium E1679]
Length = 299
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFIISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|18310997|ref|NP_562931.1| GTP-binding protein Era [Clostridium perfringens str. 13]
gi|21263575|sp|Q8XIU8.1|ERA_CLOPE RecName: Full=GTPase Era
gi|18145679|dbj|BAB81721.1| GTP-binding protein [Clostridium perfringens str. 13]
Length = 296
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIVEQLKNQK--APVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|85818038|gb|EAQ39206.1| GTP-binding protein Era [Dokdonia donghaensis MED134]
Length = 294
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 158/247 (63%), Gaps = 7/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QMIL DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L + MM V+SA +AD ++ +V+ + + + + G K+P+LL
Sbjct: 62 GII-KPAYELQASMMDFVKSAFEDADVLLYIVELGEKELKDEAFFNKIRG---AKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
++NK D + + L+ W EK + EV +SA GV + + I+ LP PA+YP
Sbjct: 118 LINKIDKGNEEMLGEALKLWSEKVPNA-EVFAISALENFGVPQVFNRIIELLPESPAFYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI M Y+ E+PYA +++ + V I+VE++S
Sbjct: 177 KDQLTDKPERFFVNEIIREKILMHYKKEIPYAVEIDTEDFFEEDEIIRMRSV-IMVERDS 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|42783426|ref|NP_980673.1| GTP-binding protein Era [Bacillus cereus ATCC 10987]
gi|49481311|ref|YP_038355.1| GTP-binding protein Era [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141202|ref|YP_085626.1| GTP-binding protein Era [Bacillus cereus E33L]
gi|118479469|ref|YP_896620.1| GTP-binding protein Era [Bacillus thuringiensis str. Al Hakam]
gi|196034381|ref|ZP_03101790.1| GTP-binding protein Era [Bacillus cereus W]
gi|196039186|ref|ZP_03106492.1| GTP-binding protein Era [Bacillus cereus NVH0597-99]
gi|196046320|ref|ZP_03113546.1| GTP-binding protein Era [Bacillus cereus 03BB108]
gi|206978417|ref|ZP_03239286.1| GTP-binding protein Era [Bacillus cereus H3081.97]
gi|217961790|ref|YP_002340360.1| GTP-binding protein Era [Bacillus cereus AH187]
gi|218905437|ref|YP_002453271.1| GTP-binding protein Era [Bacillus cereus AH820]
gi|222097745|ref|YP_002531802.1| GTP-binding protein era [Bacillus cereus Q1]
gi|225866281|ref|YP_002751659.1| GTP-binding protein Era [Bacillus cereus 03BB102]
gi|254721891|ref|ZP_05183680.1| GTP-binding protein Era [Bacillus anthracis str. A1055]
gi|301055792|ref|YP_003794003.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|375286305|ref|YP_005106744.1| GTP-binding protein Era [Bacillus cereus NC7401]
gi|376268197|ref|YP_005120909.1| GTP-binding protein Era like protein [Bacillus cereus F837/76]
gi|384182120|ref|YP_005567882.1| GTPase Era [Bacillus thuringiensis serovar finitimus YBT-020]
gi|402555565|ref|YP_006596836.1| GTPase Era [Bacillus cereus FRI-35]
gi|423354793|ref|ZP_17332418.1| GTPase Era [Bacillus cereus IS075]
gi|423373821|ref|ZP_17351160.1| GTPase Era [Bacillus cereus AND1407]
gi|423549958|ref|ZP_17526285.1| GTPase Era [Bacillus cereus ISP3191]
gi|423570540|ref|ZP_17546785.1| GTPase Era [Bacillus cereus MSX-A12]
gi|423574020|ref|ZP_17550139.1| GTPase Era [Bacillus cereus MSX-D12]
gi|423604050|ref|ZP_17579943.1| GTPase Era [Bacillus cereus VD102]
gi|42739355|gb|AAS43281.1| GTP-binding protein Era [Bacillus cereus ATCC 10987]
gi|49332867|gb|AAT63513.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974671|gb|AAU16221.1| GTP-binding protein [Bacillus cereus E33L]
gi|118418694|gb|ABK87113.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|195992923|gb|EDX56882.1| GTP-binding protein Era [Bacillus cereus W]
gi|196022790|gb|EDX61471.1| GTP-binding protein Era [Bacillus cereus 03BB108]
gi|196029813|gb|EDX68414.1| GTP-binding protein Era [Bacillus cereus NVH0597-99]
gi|206743373|gb|EDZ54811.1| GTP-binding protein Era [Bacillus cereus H3081.97]
gi|217063790|gb|ACJ78040.1| GTP-binding protein Era [Bacillus cereus AH187]
gi|218535830|gb|ACK88228.1| GTP-binding protein Era [Bacillus cereus AH820]
gi|221241803|gb|ACM14513.1| GTP-binding protein [Bacillus cereus Q1]
gi|225786790|gb|ACO27007.1| GTP-binding protein Era [Bacillus cereus 03BB102]
gi|300377961|gb|ADK06865.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|324328204|gb|ADY23464.1| GTPase Era [Bacillus thuringiensis serovar finitimus YBT-020]
gi|358354832|dbj|BAL20004.1| GTP-binding protein Era [Bacillus cereus NC7401]
gi|364513997|gb|AEW57396.1| GTP-binding protein Era like protein [Bacillus cereus F837/76]
gi|401086103|gb|EJP94334.1| GTPase Era [Bacillus cereus IS075]
gi|401095222|gb|EJQ03282.1| GTPase Era [Bacillus cereus AND1407]
gi|401189574|gb|EJQ96624.1| GTPase Era [Bacillus cereus ISP3191]
gi|401203736|gb|EJR10571.1| GTPase Era [Bacillus cereus MSX-A12]
gi|401212589|gb|EJR19332.1| GTPase Era [Bacillus cereus MSX-D12]
gi|401245736|gb|EJR52089.1| GTPase Era [Bacillus cereus VD102]
gi|401796775|gb|AFQ10634.1| GTPase Era [Bacillus cereus FRI-35]
Length = 301
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 159/252 (63%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+K ++ D ++ +V+A + R +E + E + + K P+ L
Sbjct: 65 GIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P ++ + ++ Y K D E++P+SA G+ VE + I LP GP YYP
Sbjct: 122 VINKIDQVHPEQLLELIDQYRKLHDFAEIVPISALDGNNVEALIGTIKKYLPEGPQYYPD 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+ V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQ
Sbjct: 182 NQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERPSQ 241
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 242 KGIIIGKQGKML 253
>gi|73662498|ref|YP_301279.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82592828|sp|Q49Y10.1|ERA_STAS1 RecName: Full=GTPase Era
gi|72495013|dbj|BAE18334.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 299
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ + D I+ +V+ + R DE + E + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMEML--KTIKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGE+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGELIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|110798867|ref|YP_696695.1| GTP-binding protein Era [Clostridium perfringens ATCC 13124]
gi|123148605|sp|Q0TNU5.1|ERA_CLOP1 RecName: Full=GTPase Era
gi|110673514|gb|ABG82501.1| GTP-binding protein Era [Clostridium perfringens ATCC 13124]
Length = 296
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGEDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK--APVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|359411019|ref|ZP_09203484.1| GTP-binding protein Era-like-protein [Clostridium sp. DL-VIII]
gi|357169903|gb|EHI98077.1| GTP-binding protein Era-like-protein [Clostridium sp. DL-VIII]
Length = 296
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 152/245 (62%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQM+ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + R D+ + E + D K PI LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGRGDKFILETLKDKK--CPIFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK LE Y K + E+IP+SA G V+ + D + +P GP YYP D+
Sbjct: 120 NKIDENTQDRVAKSLEMYAKEFNFAEIIPISAVKGKNVDKLVDLMKNVMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVQEKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEKGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|223044391|ref|ZP_03614425.1| GTP-binding protein Era [Staphylococcus capitis SK14]
gi|314933739|ref|ZP_07841104.1| GTP-binding protein Era [Staphylococcus caprae C87]
gi|417907958|ref|ZP_12551725.1| ribosome biogenesis GTPase Era [Staphylococcus capitis VCU116]
gi|222442260|gb|EEE48371.1| GTP-binding protein Era [Staphylococcus capitis SK14]
gi|313653889|gb|EFS17646.1| GTP-binding protein Era [Staphylococcus caprae C87]
gi|341595045|gb|EGS37723.1| ribosome biogenesis GTPase Era [Staphylococcus capitis VCU116]
Length = 300
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 5 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 65 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + ++E Y+++ D E+IP+SA G V+ D + + LP+GP YYP D
Sbjct: 122 LNKIDLVHPDALMPRIEKYKEYMDFTEIIPISALEGLNVDHFIDVLKSYLPVGPKYYPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + ++ I VE++SQK
Sbjct: 182 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRVEATIYVERDSQK 241
Query: 353 IILIGK 358
I+IGK
Sbjct: 242 GIVIGK 247
>gi|418005222|ref|ZP_12645218.1| GTP-binding protein [Lactobacillus casei UW1]
gi|410547475|gb|EKQ21708.1| GTP-binding protein [Lactobacillus casei UW1]
Length = 300
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 162/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ D+V P+SA G+ V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFDQVFPISATMGNNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|445059533|ref|YP_007384937.1| GTPase Era [Staphylococcus warneri SG1]
gi|443425590|gb|AGC90493.1| GTPase Era [Staphylococcus warneri SG1]
Length = 299
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK + D I+ +V+ + R DE + + + D K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDLK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+++ + E++P+SA G V+ D + + LP GP YYP D
Sbjct: 121 LNKIDLVHPDALMPKIEKYQEYMNFTEIVPISALEGLNVDHFIDVLKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|296133911|ref|YP_003641158.1| GTP-binding protein Era [Thermincola potens JR]
gi|296032489|gb|ADG83257.1| GTP-binding protein Era [Thermincola potens JR]
Length = 300
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 155/257 (60%), Gaps = 16/257 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+ +GQKL+I++ KPQTTR++I G+ +G YQ+I DTPGI
Sbjct: 6 KSGFVALIGRPNVGKSTLMNKFLGQKLAIMSEKPQTTRNKINGVLTGENYQVIFLDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 226
+ K H L M++ +A D I+ LV+A + E G GD + K
Sbjct: 66 HKPK-HKLGEYMVQVAYNALKEVDLILFLVEATEQ--------EVGTGDRYILEQLQEIK 116
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P++LV+NK DL++ I ++ Y EV+PVSA G ++ + D IL LP GP
Sbjct: 117 TPVILVINKIDLVQKDAILPVIDAYTARKQFAEVVPVSAITGANLQALLDNILKYLPEGP 176
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YYP DI+S+ PERF + E+IREK+ R+EVP++ V++ R +++ + V
Sbjct: 177 KYYPDDIISDQPERFVMAELIREKVLELTRDEVPHSVAVDIEEVTARKNETVYVRAVVYV 236
Query: 347 EKNSQKIILIGKVSPFL 363
E+ SQK I++GK L
Sbjct: 237 ERESQKGIIVGKGGQML 253
>gi|110802047|ref|YP_699296.1| GTP-binding protein Era [Clostridium perfringens SM101]
gi|168204746|ref|ZP_02630751.1| GTP-binding protein Era [Clostridium perfringens E str. JGS1987]
gi|168208717|ref|ZP_02634342.1| GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626]
gi|168212948|ref|ZP_02638573.1| GTP-binding protein Era [Clostridium perfringens CPE str. F4969]
gi|168215642|ref|ZP_02641267.1| GTP-binding protein Era [Clostridium perfringens NCTC 8239]
gi|169343587|ref|ZP_02864586.1| GTP-binding protein Era [Clostridium perfringens C str. JGS1495]
gi|182624448|ref|ZP_02952232.1| GTP-binding protein Era [Clostridium perfringens D str. JGS1721]
gi|422346681|ref|ZP_16427595.1| GTPase Era [Clostridium perfringens WAL-14572]
gi|122956577|sp|Q0SRG1.1|ERA_CLOPS RecName: Full=GTPase Era
gi|110682548|gb|ABG85918.1| GTP-binding protein Era [Clostridium perfringens SM101]
gi|169298147|gb|EDS80237.1| GTP-binding protein Era [Clostridium perfringens C str. JGS1495]
gi|170663559|gb|EDT16242.1| GTP-binding protein Era [Clostridium perfringens E str. JGS1987]
gi|170713142|gb|EDT25324.1| GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626]
gi|170715652|gb|EDT27834.1| GTP-binding protein Era [Clostridium perfringens CPE str. F4969]
gi|177910451|gb|EDT72828.1| GTP-binding protein Era [Clostridium perfringens D str. JGS1721]
gi|182382082|gb|EDT79561.1| GTP-binding protein Era [Clostridium perfringens NCTC 8239]
gi|373226226|gb|EHP48553.1| GTPase Era [Clostridium perfringens WAL-14572]
Length = 296
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK--APVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|333371643|ref|ZP_08463588.1| GTP-binding protein Era [Desmospora sp. 8437]
gi|332975861|gb|EGK12739.1| GTP-binding protein Era [Desmospora sp. 8437]
Length = 300
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 152/253 (60%), Gaps = 3/253 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG+V ++G+PNVGKSTL NQ++GQK++I+++KPQTTR++I G+ + Q+I DT
Sbjct: 4 PAFKSGFVTLIGRPNVGKSTLLNQVLGQKVAIMSDKPQTTRNKIRGVYTTEAEQIIFLDT 63
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K + D M++ R D I+ LVDA + D + E + K P+
Sbjct: 64 PGIHKPKSRLGD-WMVQTARETFEEVDVILFLVDAKEGMGPGDRFIMEQL--KAVKTPVF 120
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D + P + ++ Y K EV+PVSA YG+ + D I +LP GPAYYP
Sbjct: 121 LVVNKIDQVHPDTLLPLIDRYRKTFSFKEVVPVSALYGNNTTTLLDLIRRELPEGPAYYP 180
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
+ V++HPERF +GE++REK+ R EVP++ V V K + F++ I E+ S
Sbjct: 181 SEYVTDHPERFIIGELVREKVLHLTREEVPHSVAVVVEEMKEEEEGRVFVRATIYTERQS 240
Query: 351 QKIILIGKVSPFL 363
QK ILIGK L
Sbjct: 241 QKGILIGKQGSML 253
>gi|255037604|ref|YP_003088225.1| GTP-binding protein Era [Dyadobacter fermentans DSM 18053]
gi|254950360|gb|ACT95060.1| GTP-binding protein Era [Dyadobacter fermentans DSM 18053]
Length = 308
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 169/265 (63%), Gaps = 12/265 (4%)
Query: 104 EFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPE- 162
E ++ NH++G+V+++GKPNVGKSTL N ++G+++SI+T+K QTTRHRI+GI +G
Sbjct: 6 ENNHTELRNHRAGFVSIIGKPNVGKSTLMNVLVGERMSIITSKAQTTRHRIIGILNGNHE 65
Query: 163 ---YQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD-ACKAPERIDEILEE 218
+Q++ DTPG+I+ + DSMM V+ + +AD ++ +V+ KA E E+L
Sbjct: 66 NIPFQLVYSDTPGVIKPSYKLHDSMMT-FVKGSLEDADVVLFVVEIGEKAAEH--EVLPL 122
Query: 219 GVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWI 278
++ + P++LVLNK DL E+ +K++ +E +IP+SA + + D +
Sbjct: 123 L---NRTQSPVVLVLNKIDLSNEEEVKQKMQEWENEIHPAAIIPISALEKANIGTLFDAV 179
Query: 279 LTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD 338
+T+LP P Y+ +D +++ PERFF EIIREKIF+ YR E+PY+ +V + +K R
Sbjct: 180 VTRLPFHPPYFDEDELTDKPERFFASEIIREKIFLNYRQEIPYSSEVVITEFKDRDDII- 238
Query: 339 FIQVEIVVEKNSQKIILIGKVSPFL 363
I+ EI+VE+ SQK I+IG+ L
Sbjct: 239 VIRAEILVERKSQKGIIIGEKGEML 263
>gi|150026004|ref|YP_001296830.1| GTP-binding protein Era [Flavobacterium psychrophilum JIP02/86]
gi|149772545|emb|CAL44028.1| GTP-binding protein Era [Flavobacterium psychrophilum JIP02/86]
Length = 293
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 154/246 (62%), Gaps = 5/246 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QMIL DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ M +S MM V+SA +AD +V +V+ + + + + + K+P+LL
Sbjct: 62 GIIKPAYEMQES-MMNFVKSAFEDADVLVYMVEIGEQDLKDEAFFNKIIN---AKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK D ++ ++ ++ E+ P+SA V ++ D I+ LP PAYYPK
Sbjct: 118 LLNKIDTSNQAQLEAQVAFWTAKVPNAEIFPISALQNFNVPEVFDRIIKLLPESPAYYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFFV E IREKI + Y E+PYA ++ + I+ I+VE+ +Q
Sbjct: 178 DQLTDKPERFFVNETIREKILIHYSKEIPYAVEIVTEEFFEDDNIIR-IRSLIMVERETQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|347537387|ref|YP_004844812.1| GTP-binding protein Era [Flavobacterium branchiophilum FL-15]
gi|345530545|emb|CCB70575.1| GTP-binding protein Era [Flavobacterium branchiophilum FL-15]
Length = 293
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 158/247 (63%), Gaps = 7/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q+IL DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGDDFQLILSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ M +S MM V+SA +AD ++ +V+ + + D + + K+P+LL
Sbjct: 62 GIIKPAYEMQES-MMNFVKSAFEDADILIYMVEIGEQELKDDAFFNKII---HSKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+LNK D + +++ W EK + E+ P+SA V ++ I++ LP PAYYP
Sbjct: 118 LLNKIDQSNQEVLEQQVAFWSEKVPNA-EIFPISALQNFNVPEVFQRIISLLPESPAYYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV E IREKI + Y E+PYA ++ + T I+ I+VE+++
Sbjct: 177 KDQLTDKPERFFVNETIREKILLNYSKEIPYAVEIVTEEFIENDTIIR-IRSVIMVERDT 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|229916327|ref|YP_002884973.1| GTP-binding protein Era [Exiguobacterium sp. AT1b]
gi|229467756|gb|ACQ69528.1| GTP-binding protein Era [Exiguobacterium sp. AT1b]
Length = 302
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 160/254 (62%), Gaps = 6/254 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q+I DTP
Sbjct: 5 DFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVYTTDDSQIIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L MMK +A D I+ +V+ + D+ + E + PI+L
Sbjct: 65 GIHKPK-HRLGDFMMKVATNALREVDAILFMVNVTEPRGAGDDFIIEKLKGLD--TPIIL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DLI P E+ K +E Y D +P+SA G+ VE + I LP GP YYP
Sbjct: 122 VMNKIDLIHPDELPKVIEQYTNELDFAAYVPISALQGNNVEPLLGEIKKLLPEGPMYYPA 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D V++HPERF + E+IREK+ + R+EVP++ V + S K R + + I VE I+VE++
Sbjct: 182 DQVTDHPERFIISEMIREKVLHKTRDEVPHSIAVAIESIKKRENS-EMIDVEAVIMVERD 240
Query: 350 SQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 241 SQKGIIIGKKGAML 254
>gi|161760697|ref|YP_253264.2| GTP-binding protein Era [Staphylococcus haemolyticus JCSC1435]
gi|317374941|sp|Q4L6R7.2|ERA_STAHJ RecName: Full=GTPase Era
Length = 299
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEEIGRGDEYIMEMLKN--VKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + ++E Y+K+ + E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDALMPRIEQYQKYMNFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + ++ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKENDERVRVEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|126652809|ref|ZP_01724954.1| Era [Bacillus sp. B14905]
gi|126590345|gb|EAZ84465.1| Era [Bacillus sp. B14905]
Length = 271
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 161/258 (62%), Gaps = 7/258 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI
Sbjct: 4 TRSGYKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTSTDSQMIFI 63
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKL 227
DTPGI + K H L M+K ++ D I+ +V+A + + DE ILE G+
Sbjct: 64 DTPGIHKPK-HKLGDFMLKVAKNTLREVDVILFMVNAEQKLGKGDEFILEMLAGNST--- 119
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P+ LV+NK D I P E+ +E Y++ + E+IP+SA G+ VE + D + LP GP
Sbjct: 120 PVFLVINKIDQIHPDELLGIIESYKERYEFAEIIPISALQGNNVESLLDTLSKYLPDGPQ 179
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IV 345
YYP D V++HPERF + E+IREK+ R E+P++ V + + D I V I+
Sbjct: 180 YYPADQVTDHPERFIISELIREKVLHLTREEIPHSIAVVIDKIRRDEENNDKIHVSATIM 239
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 240 VERDSQKGIVIGKRGALL 257
>gi|257879930|ref|ZP_05659583.1| GTP-binding protein Era [Enterococcus faecium 1,230,933]
gi|424962633|ref|ZP_18376955.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1190]
gi|424974026|ref|ZP_18387279.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1137]
gi|424980839|ref|ZP_18393605.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV99]
gi|425021039|ref|ZP_18431319.1| ribosome biogenesis GTPase Era [Enterococcus faecium C497]
gi|425023291|ref|ZP_18433420.1| ribosome biogenesis GTPase Era [Enterococcus faecium C1904]
gi|425044722|ref|ZP_18448859.1| ribosome biogenesis GTPase Era [Enterococcus faecium 510]
gi|425051686|ref|ZP_18455341.1| ribosome biogenesis GTPase Era [Enterococcus faecium 506]
gi|431546402|ref|ZP_19519027.1| GTPase Era [Enterococcus faecium E1731]
gi|431755137|ref|ZP_19543792.1| GTPase Era [Enterococcus faecium E2883]
gi|257814158|gb|EEV42916.1| GTP-binding protein Era [Enterococcus faecium 1,230,933]
gi|402951533|gb|EJX69449.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1190]
gi|402957480|gb|EJX74869.1| ribosome biogenesis GTPase Era [Enterococcus faecium P1137]
gi|402965339|gb|EJX82064.1| ribosome biogenesis GTPase Era [Enterococcus faecium ERV99]
gi|403007888|gb|EJY21434.1| ribosome biogenesis GTPase Era [Enterococcus faecium C497]
gi|403010316|gb|EJY23701.1| ribosome biogenesis GTPase Era [Enterococcus faecium C1904]
gi|403028937|gb|EJY40723.1| ribosome biogenesis GTPase Era [Enterococcus faecium 510]
gi|403037155|gb|EJY48467.1| ribosome biogenesis GTPase Era [Enterococcus faecium 506]
gi|430591721|gb|ELB29750.1| GTPase Era [Enterococcus faecium E1731]
gi|430617612|gb|ELB54483.1| GTPase Era [Enterococcus faecium E2883]
Length = 299
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ +A D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYTALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|308069928|ref|YP_003871533.1| GTP-binding protein [Paenibacillus polymyxa E681]
gi|305859207|gb|ADM70995.1| GTP-binding protein, era-like (Bex protein) [Paenibacillus polymyxa
E681]
Length = 300
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 154/250 (61%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVFTTEDTQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M + G + ++ L+DA + D + E + + K P++LVL
Sbjct: 67 HKRQSKLGDYMNQTAFNTLG-EVEAVLFLIDAAEGLGGGDRFIAEQL--KQVKTPVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+P + +E Y K D E+IP+SAK G+ V + + + LP GP YYP D
Sbjct: 124 NKIDRIEPEALLPLIEQYRKLYDFAEIIPISAKMGNNVNTLLEQVQKYLPEGPQYYPDDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F + E++REKI R EVP++ V + K + I I VE++SQK
Sbjct: 184 ITDHPEQFVISELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGAML 253
>gi|410456779|ref|ZP_11310635.1| GTPase Era [Bacillus bataviensis LMG 21833]
gi|409927536|gb|EKN64669.1| GTPase Era [Bacillus bataviensis LMG 21833]
Length = 306
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 159/253 (62%), Gaps = 6/253 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ S P+ QMI DTPG
Sbjct: 10 YKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVLSLPDAQMIFIDTPG 69
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R +E + E PI LV
Sbjct: 70 IHKPK-HKLGDFMMKVAQNTLKEVDLILFMVNAEEGFGRGEEFILEKF--QTVNTPIFLV 126
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D I P ++ +E Y++ E++P+SA G+ VE + + I + LP GP YYP D
Sbjct: 127 INKIDQIHPDKLLPIIESYKEKYAFKEIVPISALEGNNVERLLEQIKSFLPEGPQYYPAD 186
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNS 350
V++HPERF + E+IREK R E+P++ V V+ R KD I V ++VE++S
Sbjct: 187 QVTDHPERFIITELIREKALHLTREEIPHSLAV-VLDKMERREGKDIIHVMATVIVERDS 245
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 246 QKGIIIGKQGSML 258
>gi|392972237|ref|ZP_10337629.1| GTP-binding protein Era [Staphylococcus equorum subsp. equorum Mu2]
gi|403046438|ref|ZP_10901907.1| GTP-binding protein Era [Staphylococcus sp. OJ82]
gi|392509950|emb|CCI60932.1| GTP-binding protein Era [Staphylococcus equorum subsp. equorum Mu2]
gi|402763134|gb|EJX17227.1| GTP-binding protein Era [Staphylococcus sp. OJ82]
Length = 299
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ + D I+ +V+ + R DE + + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDML--KTIKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGE+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGELIREKILHLTSEEIPHAIGVNVDRMVKEDEDRVRIEATIFVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|212638693|ref|YP_002315213.1| GTPase [Anoxybacillus flavithermus WK1]
gi|212560173|gb|ACJ33228.1| GTPase [Anoxybacillus flavithermus WK1]
Length = 306
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 157/258 (60%), Gaps = 4/258 (1%)
Query: 107 YASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 166
+ +KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 4 FMVQEGYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQII 63
Query: 167 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 226
DTPGI + K H L M+K +SA D I+ +V+A + R DE + E + + +
Sbjct: 64 FIDTPGIHKPK-HKLGDFMVKVAQSALQEVDLILFMVNAVEGFGRGDEFIIERL--KQVQ 120
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+ LV+NK D + P ++ +E Y EVIP+SA G+ VE + I LP GP
Sbjct: 121 TPVFLVINKIDEVHPDDLLPLIEQYRSLHSFAEVIPISALQGNNVETLLQQIKNYLPEGP 180
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIV 345
YYP V++HPERF + E IREK R EVP++ V + S + R + ++ I+
Sbjct: 181 QYYPAHQVTDHPERFIIAEFIREKALHLTREEVPHSIAVVIDSIERRENSDTVYVAATII 240
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 241 VERDSQKGIIIGKRGQML 258
>gi|305666362|ref|YP_003862649.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
gi|88708354|gb|EAR00591.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
Length = 296
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 160/245 (65%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPG
Sbjct: 4 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM V+SA +AD ++ +V+ + + DE E + + ++P+LL+
Sbjct: 64 II-KPAYELQSSMMDFVKSAFEDADVLLYMVEIGEKALK-DEKFFEKIKN--SEIPVLLL 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + ++++++++ E+ PVSA V+ + + IL LP PAYYPKD
Sbjct: 120 LNKIDASTQEILEEQIQYWQEQLPTVEIHPVSALNNFNVKGVFERILELLPTSPAYYPKD 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI M Y+ E+PYA ++ + I+ I+VE++SQK
Sbjct: 180 QLTDKPERFFVNETIREKILMFYKKEIPYAVEIETEEFFEDEDIIR-IRAVIMVERDSQK 238
Query: 353 IILIG 357
I+IG
Sbjct: 239 GIIIG 243
>gi|313884139|ref|ZP_07817905.1| ribosome biogenesis GTPase Era [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620586|gb|EFR32009.1| ribosome biogenesis GTPase Era [Eremococcus coleocola
ACS-139-V-Col8]
Length = 301
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 156/247 (63%), Gaps = 3/247 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR+RI G+ + + Q++ DTP
Sbjct: 5 NFKSGFVALIGRPNVGKSTLLNKVVGQKIAIMSDKAQTTRNRIQGVYTDADSQVVFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L + M+K SA AD + V+V+A + D ++ E + + +P+ L
Sbjct: 65 GIHKPK-HALGNFMLKTAYSALQGADAVCVVVNAAEKIGPGDRLVIERAKNVQ--VPLFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DL+ P ++ + +E Y+ D +V P+SA G+ V ++ + + LP GP YYP
Sbjct: 122 LINKIDLVSPEQVLQAIESYKDLADFAQVFPISALEGNNVPELVEGLKEVLPQGPQYYPA 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V +HPE F V E IREK+ + R EVP++ V V S K I I+VE+ SQ
Sbjct: 182 DQVMDHPEYFVVAEFIREKVLILTREEVPHSVAVKVESMVRNEDDKIEIHAVIIVERASQ 241
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 242 KGIIIGK 248
>gi|423440950|ref|ZP_17417856.1| GTPase Era [Bacillus cereus BAG4X2-1]
gi|423464015|ref|ZP_17440783.1| GTPase Era [Bacillus cereus BAG6O-1]
gi|423533378|ref|ZP_17509796.1| GTPase Era [Bacillus cereus HuB2-9]
gi|402417611|gb|EJV49911.1| GTPase Era [Bacillus cereus BAG4X2-1]
gi|402420282|gb|EJV52553.1| GTPase Era [Bacillus cereus BAG6O-1]
gi|402463597|gb|EJV95297.1| GTPase Era [Bacillus cereus HuB2-9]
Length = 301
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNATEGFGRGEEFIIEKLQETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQVHPEQLLELIDQYRKLHEFAEIVPISALDGNNVEALIGAIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|23099406|ref|NP_692872.1| GTP-binding protein [Oceanobacillus iheyensis HTE831]
gi|81746143|sp|Q8EPY0.1|ERA_OCEIH RecName: Full=GTPase Era
gi|22777635|dbj|BAC13907.1| GTP-binding protein (Era/TrmE family) [Oceanobacillus iheyensis
HTE831]
Length = 300
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 158/252 (62%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+++++G+PNVGKST N++IGQK++I+++K QTTR++I G+ + + QMI DTP
Sbjct: 4 NFKSGFLSIIGRPNVGKSTFMNKVIGQKIAIMSDKAQTTRNKIQGVFTTNDAQMIFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M++ D I+ +++A + R D+ + + + K P+ L
Sbjct: 64 GIHKPK-HRLGDFMVQIAEDTLNEVDSILFMINADEGYGRGDQYIIDLL--QKVNSPVFL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DLI P ++ +E Y+ D +E+IP+SA G+ V+ + D + LP GP YYP+
Sbjct: 121 IINKIDLIHPDQLLPLIEKYKSLYDFEEIIPISALEGNNVDHLVDVLKEHLPEGPQYYPE 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V++HPERF + E+IREK+ + EVP++ V + + + K IQ IV E++SQ
Sbjct: 181 DQVTDHPERFVISELIREKVLHLTKEEVPHSIAVVIENIEKNENEKLLIQATIVTERSSQ 240
Query: 352 KIILIGKVSPFL 363
K ILIGK L
Sbjct: 241 KGILIGKQGTML 252
>gi|429748609|ref|ZP_19281791.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429170496|gb|EKY12168.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 293
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 158/245 (64%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKS+L N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSSLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ +V+ + E DE + + ++P+LL+
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEVGEK-ELKDETFFKKINTL--QVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +++ +++ E+ P+SA + + + + IL LP PA++PKD
Sbjct: 118 INKIDTTDQQLLEEQVAYWQAQVPKAEIYPISALHSFHTDVVFNRILELLPESPAFFPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE++SQK
Sbjct: 178 QLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRAVIMVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|407706827|ref|YP_006830412.1| protein-export membrane protein SecDF [Bacillus thuringiensis MC28]
gi|423377842|ref|ZP_17355126.1| GTPase Era [Bacillus cereus BAG1O-2]
gi|423448882|ref|ZP_17425761.1| GTPase Era [Bacillus cereus BAG5O-1]
gi|423541367|ref|ZP_17517758.1| GTPase Era [Bacillus cereus HuB4-10]
gi|423547603|ref|ZP_17523961.1| GTPase Era [Bacillus cereus HuB5-5]
gi|423612511|ref|ZP_17588372.1| GTPase Era [Bacillus cereus VD107]
gi|423615358|ref|ZP_17591192.1| GTPase Era [Bacillus cereus VD115]
gi|423622612|ref|ZP_17598390.1| GTPase Era [Bacillus cereus VD148]
gi|401129476|gb|EJQ37159.1| GTPase Era [Bacillus cereus BAG5O-1]
gi|401172555|gb|EJQ79776.1| GTPase Era [Bacillus cereus HuB4-10]
gi|401179324|gb|EJQ86497.1| GTPase Era [Bacillus cereus HuB5-5]
gi|401246100|gb|EJR52452.1| GTPase Era [Bacillus cereus VD107]
gi|401260732|gb|EJR66900.1| GTPase Era [Bacillus cereus VD148]
gi|401261037|gb|EJR67204.1| GTPase Era [Bacillus cereus VD115]
gi|401636108|gb|EJS53862.1| GTPase Era [Bacillus cereus BAG1O-2]
gi|407384512|gb|AFU15013.1| GTP-binding protein Era [Bacillus thuringiensis MC28]
Length = 301
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNATEGFGRGEEFIIEKLQETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQVHPEQLLELIDQYRKLHEFAEIVPISALDGNNVEALIGAIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|409123739|ref|ZP_11223134.1| GTPase Era [Gillisia sp. CBA3202]
Length = 294
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 157/246 (63%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q IL DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQAILSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM V+SA +AD ++ +V+ + E DE + + +P+LL+
Sbjct: 63 II-KPAYDLQQSMMDFVKSAFEDADILIYMVEIGEQ-ELKDEAFFRKITNA--TIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D+ G + +++ W EK + E+ P+SA G V + + ++ LP PA+YPK
Sbjct: 119 LNKIDISNQGVLEEQVAHWSEKVPNA-EIYPISALQGFNVAQVFNRVVELLPESPAFYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFFV EIIREKI M Y+ E+PY+ +++ + + I+VE+ +Q
Sbjct: 178 DTLTDKPERFFVNEIIREKILMHYKKEIPYSVEIDTEEFFEDEEIIRMRSI-IMVERETQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|422874931|ref|ZP_16921416.1| GTPase Era [Clostridium perfringens F262]
gi|380304126|gb|EIA16418.1| GTPase Era [Clostridium perfringens F262]
Length = 296
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 150/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQFKNQK--APVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|242373872|ref|ZP_04819446.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1]
gi|242348426|gb|EES40028.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1]
Length = 300
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 5 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 65 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+++ D ++IP+SA G V+ D + + LP GP YYP D
Sbjct: 122 LNKIDLVHPDALMPKIEQYKEYMDFTDIIPISALEGLNVDHFIDVLKSYLPEGPKYYPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 182 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 241
Query: 353 IILIGK 358
I+IGK
Sbjct: 242 GIVIGK 247
>gi|433444369|ref|ZP_20409288.1| GTP-binding protein Era [Anoxybacillus flavithermus TNO-09.006]
gi|432001661|gb|ELK22534.1| GTP-binding protein Era [Anoxybacillus flavithermus TNO-09.006]
Length = 302
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 156/253 (61%), Gaps = 4/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+K +SA D I+ +V+A + R DE + E + + + P+ L
Sbjct: 65 GIHKPK-HKLGDFMVKVAQSALQEVDLILFMVNAVEGIGRGDEFIIERL--KQVQTPVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P ++ +E Y EVIP+SA G+ VE + I LP GP YYP
Sbjct: 122 VINKIDEVHPDDLLPLIEQYRSLHSFAEVIPISALQGNNVETLLQQIKNYLPEGPQYYPA 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNS 350
V++HPERF + E IREK R EVP++ V + S + R + ++ I+VE++S
Sbjct: 182 HQVTDHPERFIIAEFIREKALHLTREEVPHSIAVVIDSIERRENSDTVYVAATIIVERDS 241
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 242 QKGIIIGKRGQML 254
>gi|340354656|ref|ZP_08677358.1| GTP-binding protein Era [Sporosarcina newyorkensis 2681]
gi|339623179|gb|EGQ27684.1| GTP-binding protein Era [Sporosarcina newyorkensis 2681]
Length = 304
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKST N+M+GQK++I+++KPQTTR+++ GI + QMI DTPG+
Sbjct: 9 KSGFVSIIGRPNVGKSTFINRMVGQKIAIMSDKPQTTRNKVQGIVTSDTSQMIFIDTPGV 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K RS D I+ +V+A + D + E + K + P+ LV+
Sbjct: 69 HKPK-HRLGDFMLKVTRSTLSEVDVIMFMVNADEKIGTGDRFIMEWL--EKSETPVFLVI 125
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ P ++ + + Y EV+P+SA G+ +E + + + + LP GP YY D
Sbjct: 126 NKIDLVHPDQLLEIITTYTDELKFAEVVPISALNGNNIERLVETLESYLPEGPQYYAADQ 185
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
V++HPERF + E+IREK+ R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 186 VTDHPERFIISEMIREKVLHTTREEIPHSIAVAIESIEQDTSTGKTHIRATIIVERDSQK 245
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 246 GIVIGKGGKLL 256
>gi|326797796|ref|YP_004315615.1| GTP-binding protein Era [Sphingobacterium sp. 21]
gi|326548560|gb|ADZ76945.1| GTP-binding protein Era-like-protein [Sphingobacterium sp. 21]
Length = 292
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 157/246 (63%), Gaps = 6/246 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V+++GKPN GKSTL N ++G+K+SIVT K QTTRHRILGI + +YQ++ DTP
Sbjct: 2 SHKAGFVSIVGKPNAGKSTLMNSLVGEKMSIVTPKAQTTRHRILGIVNEEDYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+I K + L MM V + ++AD I+ + D + + D ++E+ K P+++
Sbjct: 62 GVI-KPAYSLQESMMNFVHGSLVDADIILFVTDINEKYDETD-VIEKL---QKTDSPVVV 116
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK D ++ K+ ++++ D + +SA GH ++ + ++L LP+ P +Y K
Sbjct: 117 LVNKIDKSNEDDVKAKINYWQETLDPTAIFAISALLGHNIQAVFQFVLEHLPVHPPFYEK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ ERFFV E++REKIF Y E+PY+ +V V S+K I EI+VE++SQ
Sbjct: 177 DELTDKSERFFVSEMVREKIFKLYEKEIPYSTEVIVTSFKEEEQLVR-ISAEIIVERDSQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KNIIIG 241
>gi|323703320|ref|ZP_08114970.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574]
gi|333924043|ref|YP_004497623.1| GTP-binding protein Era-like-protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531683|gb|EGB21572.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574]
gi|333749604|gb|AEF94711.1| GTP-binding protein Era-like-protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 302
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 150/247 (60%), Gaps = 3/247 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++SG+VA++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + S + Q++ DTP
Sbjct: 7 GYRSGFVALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLSRNDAQIVFLDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K H L M+ A D ++ LV+A P D + E + + K P+ L
Sbjct: 67 GI-HKPRHKLGEYMVDVALGALKEVDVVLFLVEATGPPGAGDRYIAEQLKEIKT--PVFL 123
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DL+K E+ +++ Y+ D EV+PVSA G V+ + D I+ LP GP YYP
Sbjct: 124 LINKVDLVKKEEVLERIVSYKDLLDFAEVVPVSALAGENVDRLVDTIVQYLPEGPQYYPA 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D+V++ PERF + EIIREK+ EVP++ V V + R + I E+ SQ
Sbjct: 184 DMVTDRPERFIMAEIIREKVLHLTSEEVPHSVAVVVEQIQARSNGVVAVHAVIYTERESQ 243
Query: 352 KIILIGK 358
K ILIGK
Sbjct: 244 KAILIGK 250
>gi|365157904|ref|ZP_09354149.1| GTPase Era [Bacillus smithii 7_3_47FAA]
gi|363622574|gb|EHL73733.1| GTPase Era [Bacillus smithii 7_3_47FAA]
Length = 304
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 159/251 (63%), Gaps = 6/251 (2%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+ ++KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+RI G+ + + QMI D
Sbjct: 5 NADYKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNRIQGVYTTDDAQMIFID 64
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI + K H L M+K +A D I+ +V+ + R ++ + E + D + P+
Sbjct: 65 TPGIHKPK-HKLGDFMVKTAVNALKEVDLILFMVNVTEGLGRGEQYIIEMLKDIQT--PV 121
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LVLNK D I P E+ +E Y++ E+ P+SA G+ V+ + I LP GP YY
Sbjct: 122 FLVLNKIDQIHPDELFPMIEQYKELYPFQEIFPISALNGNNVDRLLSAIKEYLPEGPQYY 181
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVE 347
P D V++HPERF V E+IREK+ R EVP++ V ++ R KD + + I+VE
Sbjct: 182 PADQVTDHPERFIVSELIREKVLHLTREEVPHSIAV-LIDKMEREEEKDLVHIMATIIVE 240
Query: 348 KNSQKIILIGK 358
++SQK I+IGK
Sbjct: 241 RDSQKGIIIGK 251
>gi|374324897|ref|YP_005078026.1| GTPase Era [Paenibacillus terrae HPL-003]
gi|357203906|gb|AET61803.1| GTPase Era [Paenibacillus terrae HPL-003]
Length = 300
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 154/250 (61%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVFTTEDTQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M + G + ++ L+DA + D + E + + K P++LVL
Sbjct: 67 HKRQSKLGDYMNQTAFNTLG-EVEAVLFLIDAAEGLGGGDRFIAEQL--KQVKTPVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+P + +E Y K D E++P+SAK G+ V + + + LP GP YYP D
Sbjct: 124 NKIDRIEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVNRLLEQVQKYLPEGPQYYPDDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F + E++REKI R EVP++ V + K + I I VE++SQK
Sbjct: 184 ITDHPEQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGAML 253
>gi|167630513|ref|YP_001681012.1| GTP-binding protein Era [Heliobacterium modesticaldum Ice1]
gi|226741216|sp|B0TAF1.1|ERA_HELMI RecName: Full=GTPase Era
gi|167593253|gb|ABZ85001.1| GTP-binding protein era [Heliobacterium modesticaldum Ice1]
Length = 299
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 151/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+++++G+PNVGKSTL NQ+IG+K++I+++KPQTTR+RI+G+ + P+ Q I DTPGI
Sbjct: 5 RSGFISIIGRPNVGKSTLMNQLIGKKVAIMSDKPQTTRNRIVGVLNAPKGQAIFLDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L +M+ R D I+ +VDA + P ++ + + + D K P+ LV+
Sbjct: 65 HKPK-HKLGEIMVTTARKTLGEVDLILYVVDASEEPGGGEQFISQMLKDIKT--PVFLVV 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + E KK+ Y + E+IPVSAK ++ ++D I KLP GP YYP
Sbjct: 122 NKMDTVSREEGLKKISQYSQMVAWQELIPVSAKEKTNLDRLKDLIFAKLPEGPLYYPAGS 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
++ PER + E+IREK+ R E+P++ V + + P + I E++SQK
Sbjct: 182 FTDQPERQLMAEMIREKVLHATREEIPHSVAVIIEHLQETPKGGMVVHATIFTERDSQKG 241
Query: 354 ILIGKVSPFL 363
ILIGK L
Sbjct: 242 ILIGKGGSLL 251
>gi|319651594|ref|ZP_08005721.1| era protein [Bacillus sp. 2_A_57_CT2]
gi|317396661|gb|EFV77372.1| era protein [Bacillus sp. 2_A_57_CT2]
Length = 306
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 158/253 (62%), Gaps = 6/253 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q I DTPG
Sbjct: 10 HKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNDAQFIFIDTPG 69
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R +E + E + PI LV
Sbjct: 70 IHKPK-HKLGDFMMKVAQNTLKEVDVILFMVNAQEGFGRGEEFILEKF--QSVRTPIFLV 126
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P E+ K +E Y++ + E+IP+SA G+ VE + I +P GP +YP D
Sbjct: 127 INKIDQVHPDELLKIIESYKEKYEFSEIIPISALEGNNVETLLGQIKEYIPEGPQFYPAD 186
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNS 350
V++HPERF V E+IREK R E+P++ V + + R KD I V I+VE++S
Sbjct: 187 QVTDHPERFIVSELIREKALHLTREEIPHSLAVTIDKMERRED-KDVIHVMATIIVERDS 245
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 246 QKGIVIGKQGKML 258
>gi|402494831|ref|ZP_10841567.1| GTPase Era [Aquimarina agarilytica ZC1]
Length = 295
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 156/247 (63%), Gaps = 7/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
NHK+G+V ++G PNVGKSTL N +IG+KLSI+T+K QTTRHRILGI + +Q+I DTP
Sbjct: 3 NHKAGFVNIIGNPNVGKSTLMNALIGEKLSIITSKAQTTRHRILGIVNSDTFQVIFSDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L MM V+SA +AD ++ +V+ + + ++ + K+P+LL
Sbjct: 63 GII-KPAYELQQSMMDFVKSAFEDADVLIYMVEIGEKELKDEQFFNR---INSSKIPVLL 118
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
++NK D + +++ W EK + E++P+SA ++ + D I+ LP PA+YP
Sbjct: 119 LINKIDKSNQDILEEQVTYWTEKVPNA-EILPISALEKFNIQTVFDRIVALLPFSPAFYP 177
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV E IREKI + Y+ E+PYA +V S++ I I+VE+ +
Sbjct: 178 KDQLTDKPERFFVNEAIREKILLHYKKEIPYAVEVVTESFEEDEKIIR-INAVIMVERET 236
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 237 QKGIIIG 243
>gi|30264370|ref|NP_846747.1| GTP-binding protein Era [Bacillus anthracis str. Ames]
gi|47529821|ref|YP_021170.1| GTP-binding protein Era [Bacillus anthracis str. 'Ames Ancestor']
gi|49187195|ref|YP_030447.1| GTP-binding protein Era [Bacillus anthracis str. Sterne]
gi|65321672|ref|ZP_00394631.1| COG1159: GTPase [Bacillus anthracis str. A2012]
gi|165872076|ref|ZP_02216716.1| GTP-binding protein Era [Bacillus anthracis str. A0488]
gi|167634499|ref|ZP_02392819.1| GTP-binding protein Era [Bacillus anthracis str. A0442]
gi|167638699|ref|ZP_02396975.1| GTP-binding protein Era [Bacillus anthracis str. A0193]
gi|170687400|ref|ZP_02878617.1| GTP-binding protein Era [Bacillus anthracis str. A0465]
gi|170707479|ref|ZP_02897933.1| GTP-binding protein Era [Bacillus anthracis str. A0389]
gi|177653279|ref|ZP_02935531.1| GTP-binding protein Era [Bacillus anthracis str. A0174]
gi|190566974|ref|ZP_03019890.1| GTP-binding protein Era [Bacillus anthracis str. Tsiankovskii-I]
gi|227817076|ref|YP_002817085.1| GTP-binding protein Era [Bacillus anthracis str. CDC 684]
gi|229602326|ref|YP_002868589.1| GTP-binding protein Era [Bacillus anthracis str. A0248]
gi|254684057|ref|ZP_05147917.1| GTP-binding protein Era [Bacillus anthracis str. CNEVA-9066]
gi|254736405|ref|ZP_05194111.1| GTP-binding protein Era [Bacillus anthracis str. Western North
America USA6153]
gi|254741443|ref|ZP_05199130.1| GTP-binding protein Era [Bacillus anthracis str. Kruger B]
gi|254750881|ref|ZP_05202920.1| GTP-binding protein Era [Bacillus anthracis str. Vollum]
gi|254757791|ref|ZP_05209818.1| GTP-binding protein Era [Bacillus anthracis str. Australia 94]
gi|386738189|ref|YP_006211370.1| GTP-binding protein Era [Bacillus anthracis str. H9401]
gi|421506555|ref|ZP_15953478.1| GTPase Era [Bacillus anthracis str. UR-1]
gi|421638376|ref|ZP_16078972.1| GTPase Era [Bacillus anthracis str. BF1]
gi|30259028|gb|AAP28233.1| GTP-binding protein Era [Bacillus anthracis str. Ames]
gi|47504969|gb|AAT33645.1| GTP-binding protein Era [Bacillus anthracis str. 'Ames Ancestor']
gi|49181122|gb|AAT56498.1| GTP-binding protein Era [Bacillus anthracis str. Sterne]
gi|164712207|gb|EDR17744.1| GTP-binding protein Era [Bacillus anthracis str. A0488]
gi|167513547|gb|EDR88917.1| GTP-binding protein Era [Bacillus anthracis str. A0193]
gi|167529951|gb|EDR92686.1| GTP-binding protein Era [Bacillus anthracis str. A0442]
gi|170127723|gb|EDS96596.1| GTP-binding protein Era [Bacillus anthracis str. A0389]
gi|170668595|gb|EDT19341.1| GTP-binding protein Era [Bacillus anthracis str. A0465]
gi|172081561|gb|EDT66633.1| GTP-binding protein Era [Bacillus anthracis str. A0174]
gi|190561965|gb|EDV15934.1| GTP-binding protein Era [Bacillus anthracis str. Tsiankovskii-I]
gi|227004139|gb|ACP13882.1| GTP-binding protein Era [Bacillus anthracis str. CDC 684]
gi|229266734|gb|ACQ48371.1| GTP-binding protein Era [Bacillus anthracis str. A0248]
gi|384388041|gb|AFH85702.1| GTP-binding protein Era [Bacillus anthracis str. H9401]
gi|401823548|gb|EJT22695.1| GTPase Era [Bacillus anthracis str. UR-1]
gi|403394802|gb|EJY92042.1| GTPase Era [Bacillus anthracis str. BF1]
Length = 301
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 158/252 (62%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+K ++ D ++ +V+A + R +E + E + + K P+ L
Sbjct: 65 GIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--PVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P ++ + ++ Y K D E++P+SA G+ E + I LP GP YYP
Sbjct: 122 VINKIDQVHPEQLLELIDQYRKLHDFAEIVPISALDGNNAEALIGTIKKYLPEGPQYYPD 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+ V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+ SQ
Sbjct: 182 NQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVERPSQ 241
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 242 KGIIIGKQGKML 253
>gi|126663305|ref|ZP_01734303.1| putative GTP-binding protein [Flavobacteria bacterium BAL38]
gi|126624963|gb|EAZ95653.1| putative GTP-binding protein [Flavobacteria bacterium BAL38]
Length = 294
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 158/246 (64%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+GYV ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++ DTPG
Sbjct: 3 HKAGYVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGDDFQVLFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD +V +V+ + + + + + K+P+LL+
Sbjct: 63 II-KPAYELQNSMMDFVKSAFEDADILVYMVEIGEKELKDEAFFNKII---HSKIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D ++ ++++ W EK + E+ P+SA V+ + D I+ LP+ PA+YPK
Sbjct: 119 LNKIDKSNQEQLEEQVQAWKEKVPNA-ELFPISALENFNVQTVFDRIIELLPVSPAFYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFFV E IREKI + Y E+PYA ++ + I+ I+VE+++Q
Sbjct: 178 DALTDKPERFFVNETIREKILLNYDKEIPYAVEIETEEFIEDDNIIR-IRAVIMVERDTQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|339635061|ref|YP_004726702.1| GTPase Era [Weissella koreensis KACC 15510]
gi|338854857|gb|AEJ24023.1| GTPase Era [Weissella koreensis KACC 15510]
Length = 302
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG++A++G+PNVGKSTL NQMIG+K++I++ K QTTR++I GI + + Q++
Sbjct: 2 SEQEFKSGFIALVGRPNVGKSTLLNQMIGEKIAIMSPKAQTTRNKIQGIYTTTQGQIVFL 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+K SA +D + LVDA R D+ + + + K P
Sbjct: 62 DTPGI-HKPQNSLGDYMVKTAMSAIRESDMVWFLVDAETPRGRGDDFIINRL--KETKTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK DL+KP + + Y+ D E+ P+SA+ G GV+ + D+ + K+ +GP Y
Sbjct: 119 VYLIINKIDLVKPEALLTMIADYQSQMDFAEIFPISARNGDGVQSLLDFAMPKMEVGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D +++HPERF + E+IREK+ R EVP++ V + + + IQ I+VE+
Sbjct: 179 YPADQITDHPERFIMAELIREKVLQLTRQEVPHSVAVVIDKIERKDEKHLHIQATIIVER 238
Query: 349 NSQKIILIGK 358
+QK I+IGK
Sbjct: 239 PTQKNIVIGK 248
>gi|420161056|ref|ZP_14667827.1| GTP-binding protein Era [Weissella koreensis KCTC 3621]
gi|394745806|gb|EJF34624.1| GTP-binding protein Era [Weissella koreensis KCTC 3621]
Length = 302
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG++A++G+PNVGKSTL NQMIG+K++I++ K QTTR++I GI + + Q++
Sbjct: 2 SEQEFKSGFIALVGRPNVGKSTLLNQMIGEKIAIMSPKAQTTRNKIQGIYTTTQGQIVFL 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+K SA +D + LVDA R D+ + + + K P
Sbjct: 62 DTPGI-HKPQNSLGDYMVKTAMSAIRESDMVWFLVDAETPRGRGDDFIINRL--KETKTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK DL+KP + + Y+ D E+ P+SA+ G GV+ + D+ + K+ +GP Y
Sbjct: 119 VYLIINKIDLVKPEALLTMIADYQSQMDFAEIFPISARNGDGVQSLLDFAMPKMEVGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D +++HPERF + E+IREK+ R EVP++ V + + + IQ I+VE+
Sbjct: 179 YPADQITDHPERFIMAELIREKVLQLTRQEVPHSVAVVIDKIERKDEKHLHIQATIIVER 238
Query: 349 NSQKIILIGK 358
+QK I+IGK
Sbjct: 239 PTQKNIVIGK 248
>gi|95930678|ref|ZP_01313412.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684]
gi|95133330|gb|EAT14995.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684]
Length = 303
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 156/252 (61%), Gaps = 6/252 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +SG+V+++G+PNVGKSTL NQ++GQK++I NKPQTTR+RILGI S Q++
Sbjct: 7 TESTFRSGFVSIVGRPNVGKSTLLNQILGQKIAITANKPQTTRNRILGIHSEDNAQVLFL 66
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K L+ M+ SA D +V LV+A D+ + + + + +P
Sbjct: 67 DTPGI-HKATGKLNQYMVDQALSACRGVDVVVFLVEATDRVGGGDDFILDVLA--QSDIP 123
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++LV+NK DL++ ++ + Y + D E+IP+SA G GVE + + LP GP Y
Sbjct: 124 VVLVINKVDLVEKDKLLPLIAQYAERFDFKEIIPLSALNGSGVERLVASVRDMLPEGPPY 183
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVV 346
YP+++V++ PERF VGE+IREKI + EVPY V V +++ RP K+ IQ I V
Sbjct: 184 YPEEMVTDLPERFIVGEMIREKILRKTHQEVPYGVAVQVDNFEERP-GKNLIAIQATIYV 242
Query: 347 EKNSQKIILIGK 358
+++ K IL+GK
Sbjct: 243 GRDAHKRILVGK 254
>gi|296504794|ref|YP_003666494.1| GTP-binding protein Era [Bacillus thuringiensis BMB171]
gi|296325846|gb|ADH08774.1| GTP-binding protein Era [Bacillus thuringiensis BMB171]
Length = 301
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 161/255 (63%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP Y
Sbjct: 119 VFLVINKIDQLHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKNYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP++ V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPENQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|423452396|ref|ZP_17429249.1| GTPase Era [Bacillus cereus BAG5X1-1]
gi|423483883|ref|ZP_17460573.1| GTPase Era [Bacillus cereus BAG6X1-2]
gi|401140034|gb|EJQ47591.1| GTPase Era [Bacillus cereus BAG5X1-1]
gi|401141434|gb|EJQ48989.1| GTPase Era [Bacillus cereus BAG6X1-2]
Length = 301
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNATEGYGRGEEFIIEKLQETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQVHPEQLLELIDQYRKLYEFAEIVPISALDGNNVEALIGAIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|315224466|ref|ZP_07866293.1| GTP-binding protein Era [Capnocytophaga ochracea F0287]
gi|420159053|ref|ZP_14665862.1| GTP-binding protein Era [Capnocytophaga ochracea str. Holt 25]
gi|314945487|gb|EFS97509.1| GTP-binding protein Era [Capnocytophaga ochracea F0287]
gi|394762740|gb|EJF44927.1| GTP-binding protein Era [Capnocytophaga ochracea str. Holt 25]
Length = 293
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 158/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PIL 230
II K + L + MM V+SA +AD ++ +V+ + E+ +E ++L P+L
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D G + +++ ++++ E+ P+SA E + + I+ LP PA++P
Sbjct: 116 LLINKVDTSDQGVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFP 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ S
Sbjct: 176 KDQLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERES 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|319892624|ref|YP_004149499.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03]
gi|386319167|ref|YP_006015330.1| GTP-binding protein Era [Staphylococcus pseudintermedius ED99]
gi|317162320|gb|ADV05863.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03]
gi|323464338|gb|ADX76491.1| GTP-binding protein Era [Staphylococcus pseudintermedius ED99]
Length = 298
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 153/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V ++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q++ DTPG
Sbjct: 4 YKSGFVTIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQQDAQIVFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D ++ +V+ + R DE + E + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAVMFMVNVNEEIGRGDEYIMEML--KTVKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + ++E Y+++ D E+IP+SA GH V+ + + + LP GP YYP
Sbjct: 121 LNKIDLVHPDALMPRIEQYQRYMDFAEIIPISALEGHNVDHFINVLKSYLPEGPQYYPDG 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V E+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSELIREKILQTTSEEIPHAIGVNVERMTQESEDRVHIEAVIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|440748786|ref|ZP_20928037.1| GTP-binding protein Era [Mariniradius saccharolyticus AK6]
gi|436482910|gb|ELP38998.1| GTP-binding protein Era [Mariniradius saccharolyticus AK6]
Length = 296
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 164/251 (65%), Gaps = 7/251 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +HK+G+V ++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + P+YQ++
Sbjct: 2 SQDSHKAGFVNIVGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINEPDYQIVFS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+++ K + L MM V + +AD IV + D + I++++++ + D +P
Sbjct: 62 DTPGMLKPK-YELHKSMMGFVHISLEDADVIVFVTDLYETDAEIEDVIKK-IND--SGVP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL K ++ + + ++ + + VIP+SA E I IL +LP+ P +
Sbjct: 118 VLLVINKIDLNKGDKLDEVIAYWTQRLKAEVVIPISATEKFNTEKIMVEILERLPVHPPF 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVS-YKTRPTAKDFIQVEIVVE 347
Y KD +++ PERFF EIIREKIF+ Y+ E+PY+ +V + Y+ + I+ I VE
Sbjct: 178 YDKDELTDRPERFFASEIIREKIFLNYKKEIPYSTEVAIEDFYEEEKIIR--IRAIIYVE 235
Query: 348 KNSQKIILIGK 358
+ SQK ILIG+
Sbjct: 236 RMSQKGILIGE 246
>gi|423470517|ref|ZP_17447261.1| GTPase Era [Bacillus cereus BAG6O-2]
gi|402436183|gb|EJV68215.1| GTPase Era [Bacillus cereus BAG6O-2]
Length = 301
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 159/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNATEGFGRGEEFIIEKLQETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ ++ Y K + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQVHPEQLLALIDQYRKLHEFAEIVPISALDGNNVEALIGAIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|418633118|ref|ZP_13195535.1| GTP-binding protein Era [Staphylococcus epidermidis VCU129]
gi|420190179|ref|ZP_14696123.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM037]
gi|420204483|ref|ZP_14710041.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM015]
gi|374839937|gb|EHS03444.1| GTP-binding protein Era [Staphylococcus epidermidis VCU129]
gi|394259070|gb|EJE03940.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM037]
gi|394273493|gb|EJE17924.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM015]
Length = 299
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSYLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV K I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDKVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|163942056|ref|YP_001646940.1| GTP-binding protein Era [Bacillus weihenstephanensis KBAB4]
gi|423368351|ref|ZP_17345783.1| GTPase Era [Bacillus cereus VD142]
gi|423489484|ref|ZP_17466166.1| GTPase Era [Bacillus cereus BtB2-4]
gi|423495207|ref|ZP_17471851.1| GTPase Era [Bacillus cereus CER057]
gi|423497999|ref|ZP_17474616.1| GTPase Era [Bacillus cereus CER074]
gi|423512414|ref|ZP_17488945.1| GTPase Era [Bacillus cereus HuA2-1]
gi|423519000|ref|ZP_17495481.1| GTPase Era [Bacillus cereus HuA2-4]
gi|423521841|ref|ZP_17498314.1| GTPase Era [Bacillus cereus HuA4-10]
gi|423591704|ref|ZP_17567735.1| GTPase Era [Bacillus cereus VD048]
gi|423598383|ref|ZP_17574383.1| GTPase Era [Bacillus cereus VD078]
gi|423660855|ref|ZP_17636024.1| GTPase Era [Bacillus cereus VDM022]
gi|423669884|ref|ZP_17644913.1| GTPase Era [Bacillus cereus VDM034]
gi|423673910|ref|ZP_17648849.1| GTPase Era [Bacillus cereus VDM062]
gi|163864253|gb|ABY45312.1| GTP-binding protein Era [Bacillus weihenstephanensis KBAB4]
gi|401080950|gb|EJP89231.1| GTPase Era [Bacillus cereus VD142]
gi|401151300|gb|EJQ58752.1| GTPase Era [Bacillus cereus CER057]
gi|401160055|gb|EJQ67434.1| GTPase Era [Bacillus cereus HuA2-4]
gi|401161286|gb|EJQ68653.1| GTPase Era [Bacillus cereus CER074]
gi|401176503|gb|EJQ83698.1| GTPase Era [Bacillus cereus HuA4-10]
gi|401231837|gb|EJR38339.1| GTPase Era [Bacillus cereus VD048]
gi|401236653|gb|EJR43110.1| GTPase Era [Bacillus cereus VD078]
gi|401299011|gb|EJS04611.1| GTPase Era [Bacillus cereus VDM034]
gi|401300896|gb|EJS06485.1| GTPase Era [Bacillus cereus VDM022]
gi|401310276|gb|EJS15601.1| GTPase Era [Bacillus cereus VDM062]
gi|402431720|gb|EJV63784.1| GTPase Era [Bacillus cereus BtB2-4]
gi|402449385|gb|EJV81222.1| GTPase Era [Bacillus cereus HuA2-1]
Length = 301
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNATEGYGRGEEFIIEKLQETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQLHPEQLLELIDQYRKLYEFAEIVPISALDGNNVEALIGAIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|149183349|ref|ZP_01861787.1| Era [Bacillus sp. SG-1]
gi|148848946|gb|EDL63158.1| Era [Bacillus sp. SG-1]
Length = 297
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 157/253 (62%), Gaps = 6/253 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + E QMI DTPG
Sbjct: 2 YKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVYTTNESQMIFIDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +++A + R DE + E + K P+ LV
Sbjct: 62 IHKPK-HKLGDFMMKIAQNTLREVDIILFMINAEEGYGRGDEFIIEKL--KGVKTPVFLV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + P +I +E Y D V+P+SA G+ VE + I +LP GP YYP D
Sbjct: 119 LNKIDQLHPDKILPLIEQYNALHDFAAVVPISALEGNNVETLISEIRKELPEGPQYYPAD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNS 350
+++HPERF V E+IREK R E+P++ V + TR K+ I V IVVE++S
Sbjct: 179 QITDHPERFIVSELIREKALHLTREEIPHSLAVVIDKISTR-GDKNVIDVMATIVVERDS 237
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 238 QKGIIIGKQGGML 250
>gi|253576082|ref|ZP_04853414.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844425|gb|EES72441.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14]
Length = 300
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + E Q++ DTPGI
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHIIGQKIAIMSDKPQTTRNKIHGVYTSEEMQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M + + G + ++ LVDA + D + E + D + P++LVL
Sbjct: 67 HKRQSKLGDYMNTTALNTLG-EVEAVLFLVDAAEGLGGGDRFIIERLKDVRT--PVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++P ++ +E Y K E++P+SA G+ V + + I LP GP YYP+D
Sbjct: 124 NKIDRVEPEQLLPLIEEYSKLYPFSEIVPISAMLGNNVNRLLEQIGKYLPEGPQYYPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPE+F E+IREKI R EVP++ V + + + +I I VE++SQK
Sbjct: 184 VTDHPEQFVCAELIREKILHLTREEVPHSIAVTIEDMRVQENGVVYISAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGALL 253
>gi|390453089|ref|ZP_10238617.1| GTPase Era [Paenibacillus peoriae KCTC 3763]
Length = 300
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M + G + ++ L+DA + D + E + + K P++LVL
Sbjct: 67 HKRQSKLGDYMNQTAFNALG-EVEAVLFLIDAAEGLGGGDRFIVEQL--KQVKTPVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+P + +E Y K D E++P+SAK G+ V+ + + + LP GP YYP D
Sbjct: 124 NKIDRIEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVDRLLEQLQKYLPEGPQYYPDDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F + E++REKI R EVP++ V + K + I I VE++SQK
Sbjct: 184 ITDHPEQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGAML 253
>gi|86140695|ref|ZP_01059254.1| putative GTP-binding protein [Leeuwenhoekiella blandensis MED217]
gi|85832637|gb|EAQ51086.1| putative GTP-binding protein [Leeuwenhoekiella blandensis MED217]
Length = 309
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 157/253 (62%), Gaps = 11/253 (4%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A + HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q I
Sbjct: 13 AENKPHKAGFVNIIGNPNVGKSTLMNAIVGERLSIITSKAQTTRHRILGIVNGDDFQAIF 72
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPGII K + L + MM V+SA +AD ++ +V+ + E DE + +
Sbjct: 73 SDTPGII-KPAYELQASMMDFVKSAFEDADVLIYMVELGEK-ELKDEDFFNKI--RNTDI 128
Query: 228 PILLVLNKKDLIKPGE---IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
P+LL++NK D K E A + W EK + E+ +SA GV + D IL LP+
Sbjct: 129 PVLLLINKID--KGNEELLEASRTHWQEKVPNA-EIFAISALEDFGVSQVFDRILDALPV 185
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
P +YPKD +++ PERFFV EIIREKI M Y+ EVPY+ +++ + + I
Sbjct: 186 SPPFYPKDALTDKPERFFVNEIIREKILMHYKKEVPYSVEIDTEEFVEEENIIRMRSI-I 244
Query: 345 VVEKNSQKIILIG 357
+VE++SQK I+IG
Sbjct: 245 MVERDSQKGIIIG 257
>gi|423395400|ref|ZP_17372601.1| GTPase Era [Bacillus cereus BAG2X1-1]
gi|423406275|ref|ZP_17383424.1| GTPase Era [Bacillus cereus BAG2X1-3]
gi|401654811|gb|EJS72350.1| GTPase Era [Bacillus cereus BAG2X1-1]
gi|401660269|gb|EJS77751.1| GTPase Era [Bacillus cereus BAG2X1-3]
Length = 301
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLQETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQVHPEQLLELIDQYRKLYEFAEIVPISALDGNNVEALIGTIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 PSQKGIIIGKQGKML 253
>gi|332686714|ref|YP_004456488.1| GTP-binding protein Era [Melissococcus plutonius ATCC 35311]
gi|332370723|dbj|BAK21679.1| GTP-binding protein Era [Melissococcus plutonius ATCC 35311]
Length = 300
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 159/251 (63%), Gaps = 3/251 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG++A++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + + Q+I DTPG
Sbjct: 5 HKSGFIAIIGRPNVGKSTLLNRIVGQKVAIMSDKAQTTRNKIQGIYTTQKAQLIFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M++ SA D + ++ A + + D+ + E + + ++ P+ LV
Sbjct: 65 IHKPK-HRLGDFMVETAYSALREVDATLFMISADQKRGKGDDFIIERLKEMQN--PVYLV 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D I P ++ +E Y + E+IP+SA G+ + + D ++ ++P+GP Y+P+D
Sbjct: 122 INKIDKIHPDDLLGIIEDYSQQMTFKEIIPISATEGNNFDHLMDVLVEQMPVGPQYFPED 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
V++HPE F V E+IREKI R E+P++ V V S K K IQ IVVE++SQK
Sbjct: 182 QVTDHPEYFIVSELIREKILQLTREEIPHSVAVIVDSMKRDENDKVHIQATIVVERDSQK 241
Query: 353 IILIGKVSPFL 363
I+IG L
Sbjct: 242 GIIIGNGGKML 252
>gi|30022378|ref|NP_834009.1| GTP-binding protein Era [Bacillus cereus ATCC 14579]
gi|218232187|ref|YP_002369107.1| GTP-binding protein Era [Bacillus cereus B4264]
gi|384188373|ref|YP_005574269.1| GTP-binding protein Era [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676688|ref|YP_006929059.1| GTPase Era [Bacillus thuringiensis Bt407]
gi|423385801|ref|ZP_17363057.1| GTPase Era [Bacillus cereus BAG1X1-2]
gi|423527842|ref|ZP_17504287.1| GTPase Era [Bacillus cereus HuB1-1]
gi|423585220|ref|ZP_17561307.1| GTPase Era [Bacillus cereus VD045]
gi|423631022|ref|ZP_17606769.1| GTPase Era [Bacillus cereus VD154]
gi|423640619|ref|ZP_17616237.1| GTPase Era [Bacillus cereus VD166]
gi|423650165|ref|ZP_17625735.1| GTPase Era [Bacillus cereus VD169]
gi|423657256|ref|ZP_17632555.1| GTPase Era [Bacillus cereus VD200]
gi|452200765|ref|YP_007480846.1| GTP-binding protein Era [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|29897936|gb|AAP11210.1| GTP-binding protein [Bacillus cereus ATCC 14579]
gi|218160144|gb|ACK60136.1| GTP-binding protein Era [Bacillus cereus B4264]
gi|326942082|gb|AEA17978.1| GTP-binding protein Era [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401233863|gb|EJR40349.1| GTPase Era [Bacillus cereus VD045]
gi|401264389|gb|EJR70501.1| GTPase Era [Bacillus cereus VD154]
gi|401279680|gb|EJR85602.1| GTPase Era [Bacillus cereus VD166]
gi|401282583|gb|EJR88482.1| GTPase Era [Bacillus cereus VD169]
gi|401289999|gb|EJR95703.1| GTPase Era [Bacillus cereus VD200]
gi|401635857|gb|EJS53612.1| GTPase Era [Bacillus cereus BAG1X1-2]
gi|402451505|gb|EJV83324.1| GTPase Era [Bacillus cereus HuB1-1]
gi|409175817|gb|AFV20122.1| GTPase Era [Bacillus thuringiensis Bt407]
gi|452106158|gb|AGG03098.1| GTP-binding protein Era [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 301
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 161/255 (63%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP Y
Sbjct: 119 VFLVINKIDQLHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP++ V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPENQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|423558116|ref|ZP_17534418.1| GTPase Era [Bacillus cereus MC67]
gi|401191384|gb|EJQ98406.1| GTPase Era [Bacillus cereus MC67]
Length = 301
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 159/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q++
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNATEGYGRGEEFIIEKLQETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ ++ Y K + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQVHPEQLLALIDQYRKLYEFAEIVPISALDGNNVEALIGAIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|163754016|ref|ZP_02161139.1| putative GTP-binding protein [Kordia algicida OT-1]
gi|161326230|gb|EDP97556.1| putative GTP-binding protein [Kordia algicida OT-1]
Length = 294
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 159/247 (64%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QMIL DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMILSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM V+SA +AD ++ +V+ + + + ++ + K+P++L+
Sbjct: 63 II-KPAYELQSSMMDFVKSAFEDADVLIYMVEIGEKSLKDEAFFKKIIN---SKIPVILL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D ++ +++E +++ E+ P+SA V + I+ LP PA+YPKD
Sbjct: 119 LNKIDKSSQEQLEEQMELWKEKVPTAEIYPISALENFNVPQVFSRIIELLPESPAFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV E IREKI M Y+ E+PYA + V + ++ I++ I+VE+ +
Sbjct: 179 QLTDKPERFFVNETIREKILMNYKKEIPYAVE---VETEEFFEEENIIRIRSVIMVERET 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|431737132|ref|ZP_19526088.1| GTPase Era [Enterococcus faecium E1972]
gi|430599508|gb|ELB37214.1| GTPase Era [Enterococcus faecium E1972]
Length = 299
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 153/241 (63%), Gaps = 3/241 (1%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DT
Sbjct: 2 PEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PGI + K H L M++ SA D ++ ++ A + R D+ + E + + P+
Sbjct: 62 PGIHKPK-HRLGDFMVEAAYSALKEVDAVLFMISADQKRGRGDDFIIERLKNVHS--PVY 118
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D I P E+ +E Y +VIP+SA G+ VE + D +++++P GP Y+P
Sbjct: 119 LIINKIDKIHPDELLGIIEDYSTQMPFAQVIPISATEGNNVERLMDVLVSEMPEGPQYFP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++HPE F V E+IREK+ R+EVP++ V V K K IQ I+VE++S
Sbjct: 179 DDQVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDLMKRNENDKIHIQATIIVERDS 238
Query: 351 Q 351
Q
Sbjct: 239 Q 239
>gi|416125306|ref|ZP_11595904.1| GTP-binding protein Era [Staphylococcus epidermidis FRI909]
gi|420178264|ref|ZP_14684597.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM057]
gi|420180072|ref|ZP_14686332.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM053]
gi|420199500|ref|ZP_14705178.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM031]
gi|319400903|gb|EFV89122.1| GTP-binding protein Era [Staphylococcus epidermidis FRI909]
gi|394246890|gb|EJD92142.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM057]
gi|394251504|gb|EJD96589.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM053]
gi|394272282|gb|EJE16751.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM031]
Length = 299
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV K I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDKVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|418411979|ref|ZP_12985245.1| GTPase Era [Staphylococcus epidermidis BVS058A4]
gi|410891562|gb|EKS39359.1| GTPase Era [Staphylococcus epidermidis BVS058A4]
Length = 299
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLNNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|184155316|ref|YP_001843656.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
gi|227514585|ref|ZP_03944634.1| GTP-binding protein Era [Lactobacillus fermentum ATCC 14931]
gi|260662170|ref|ZP_05863066.1| GTP-binding protein Era [Lactobacillus fermentum 28-3-CHN]
gi|183226660|dbj|BAG27176.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
gi|227086996|gb|EEI22308.1| GTP-binding protein Era [Lactobacillus fermentum ATCC 14931]
gi|260553553|gb|EEX26445.1| GTP-binding protein Era [Lactobacillus fermentum 28-3-CHN]
Length = 301
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 156/254 (61%), Gaps = 3/254 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N M+GQK++I++N QTTR++I GI + E Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYMVGQKVAIMSNVAQTTRNKIQGIYTSDEAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI + + + D M ++ SA D I+ +V A + D + E + K + PI
Sbjct: 63 TPGIHKPQTRLGD-FMERSALSALDEVDAILFVVPANEKRGAGDNFIIERL--KKVQQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D + P ++ + YE +V+PVSA G+ V + + ++ +LP GP YY
Sbjct: 120 YLVVNKIDQVNPNDLPDIIAQYEGALPFKKVVPVSALQGNNVNTLINDLVDQLPTGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D VS+HPERF + E+IREK+F+ R EVP++ ++V S + + I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLNTREEVPHSVAIDVTSIQREDDETIHVSANIIVERP 239
Query: 350 SQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 GQKGIIIGKGGSML 253
>gi|146299638|ref|YP_001194229.1| GTP-binding protein Era [Flavobacterium johnsoniae UW101]
gi|146154056|gb|ABQ04910.1| GTP-binding protein Era [Flavobacterium johnsoniae UW101]
Length = 295
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 159/253 (62%), Gaps = 19/253 (7%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTP
Sbjct: 4 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQIVLSDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK------- 224
GII+ M +S MM V+SA +AD +V +V EI E+ + D
Sbjct: 64 GIIKPAYEMQES-MMNFVKSAFEDADILVYMV----------EIGEQNLKDEDFFKKIFY 112
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K+P+LL+LNK D ++ +++ ++++ E+ P+SA V ++ + I+ LP
Sbjct: 113 AKIPVLLLLNKIDNSNQEQLEEQVAFWKEKVPNAEIFPISALQNFNVPEVFERIIQLLPE 172
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
PAYYPKD +++ PERFFV E IREKI + Y E+PYA ++ + T I+ I
Sbjct: 173 SPAYYPKDQLTDKPERFFVNETIREKILLNYAKEIPYAVEIVTEEFHETDTIIR-IRSVI 231
Query: 345 VVEKNSQKIILIG 357
+VE+++QK I+IG
Sbjct: 232 MVERDTQKGIIIG 244
>gi|295132648|ref|YP_003583324.1| GTP-binding protein [Zunongwangia profunda SM-A87]
gi|294980663|gb|ADF51128.1| putative GTP-binding protein [Zunongwangia profunda SM-A87]
Length = 294
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 159/246 (64%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q+IL DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQVILSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM V+SA +AD +V +V+ + + + + V H + +P+LL+
Sbjct: 63 II-KPAYELQESMMDFVKSAFEDADILVYMVEIGERELKDEAFFRKIV--HAE-IPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D ++ +++ W EK + E+ P+SA G V ++ IL LP PA+YPK
Sbjct: 119 LNKIDKSNQEQLEEQVGLWKEKVPNA-EIYPISALEGFNVSEVFSRILELLPESPAFYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFFV EIIREKI + Y+ E+PYA +++ + + I+VE+++Q
Sbjct: 178 DSLTDKPERFFVNEIIREKILLHYKKEIPYAVEIDTEEFFEEEKIIRMRSI-IMVERDTQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|429754461|ref|ZP_19287183.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429169351|gb|EKY11108.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 293
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 157/245 (64%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ +V+ + E DE+ + +K +P+LL+
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-ELKDEVFFNRI--NKLDVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +++ ++++ E+ P+SA E + + I+ LP PA++PKD
Sbjct: 118 INKVDTSDQSTLEEQVAYWKEKVPRAEIFPISALRNFQTEVVFNRIIELLPESPAFFPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV EIIREKI + Y+ E+PY+ +V S+ I+ I+VE+ SQK
Sbjct: 178 QLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSEMIIH-IRSVIMVERESQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|384097871|ref|ZP_09998991.1| GTPase Era [Imtechella halotolerans K1]
gi|383836753|gb|EID76160.1| GTPase Era [Imtechella halotolerans K1]
Length = 293
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 160/245 (65%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++Q+IL DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM V+SA +AD ++ +V+ + E DE+ + + + K+P+LL+
Sbjct: 62 II-KPAYELQSSMMDFVKSAFEDADVLLYMVEIGEK-ELKDELFFDKINN--SKVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D ++ ++++++ + E+ P+SA V ++ + I+ LP PA+YPKD
Sbjct: 118 LNKIDTSTQEQLEEQVQYWSEKAPRAEIFPISALQNFNVIEVFNRIIELLPESPAFYPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI + Y+ E+PYA +V + V I+VE+++QK
Sbjct: 178 QLTDKPERFFVNETIREKILLNYKKEIPYAVEVETEEFFEEDHIIRMRSV-IMVERDTQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|392957207|ref|ZP_10322731.1| GTPase [Bacillus macauensis ZFHKF-1]
gi|391876614|gb|EIT85210.1| GTPase [Bacillus macauensis ZFHKF-1]
Length = 302
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 7 KSGFVSIIGRPNVGKSTLLNHIIGQKIAIMSDKPQTTRNKIQGVYTTEDAQVVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M K + D I+ +V+A + R D+ + + + + D+ P+ LV+
Sbjct: 67 HKPK-HRLGDFMTKIAQQTLREVDLILFVVNAEEGYGRGDQFIIDKL-EQIDQ-PVFLVI 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P ++ +E+Y +V EVIP+SA G+ V + I L GP YYP+D
Sbjct: 124 NKIDTITPDKLFPLIEFYSSKINVQEVIPISALQGNNVNTLMTQITNYLEEGPQYYPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEKNSQK 352
V++HPERF GE+IREK+ R EVP++ V + KTR FI ++VE+ SQK
Sbjct: 184 VTDHPERFIAGELIREKVLHLTREEVPHSIAVVIEEMKTREERNVVFIHATVIVERKSQK 243
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 244 GIIIGKQGSML 254
>gi|365904106|ref|ZP_09441865.1| GTPase Era [Lactobacillus versmoldensis KCTC 3814]
Length = 302
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 158/252 (62%), Gaps = 6/252 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+PNVGKST N++I ++++I + K QTTR++I GI + E Q+I DTPGI
Sbjct: 6 RSGFVAIVGRPNVGKSTFMNRIIKEQVAITSPKAQTTRNKIQGIYTDNERQIIFLDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + LD M K SA D ++ + +A + D+ + E + + K P+ L+L
Sbjct: 66 -HKTHNDLDQYMDKAALSALKEVDVVLFMTEAGQQAGPGDKYIIEELANVK--APVFLIL 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P E+A +++ Y+ D EVIP+SA G+ VED+ D + LP GP YY +D
Sbjct: 123 NKIDLINPDEMAPQIDEYKDLLDFAEVIPISATNGNNVEDLIDSLTKHLPFGPKYYDEDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQ 351
+++HPE F VGE+IREKI R+E+P++ V V S R T + +QVE I VE++ Q
Sbjct: 183 ITDHPEYFIVGELIREKILDDTRDEIPHSVAVIVESMNQR-TERGKLQVEATIYVERDGQ 241
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 242 KAIVIGKGGSML 253
>gi|134300318|ref|YP_001113814.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1]
gi|134053018|gb|ABO50989.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1]
Length = 302
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 150/246 (60%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++SG+VA++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + + + QM+ DTPG
Sbjct: 8 YRSGFVALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLTRNDAQMVFLDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K H L M+ A D + LV+A +AP D+ + E + K P+ L+
Sbjct: 68 I-HKPRHKLGEYMVDVALGALKEVDVALFLVEASEAPGPGDQYIAEQLKGIKT--PVFLM 124
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DLI+ + +++ Y+ EVIPVSA G VE + D I+ LP GP YYP D
Sbjct: 125 LNKVDLIQREAVLERILQYKDLLPFAEVIPVSALAGENVERLIDTIIKYLPEGPQYYPAD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+V++ PERF + EIIREK+ E+P++ V V K R + I E++SQK
Sbjct: 185 MVTDRPERFIMAEIIREKVLHLTSEEIPHSVAVVVEQIKERNNGVVAVSAVIYTERDSQK 244
Query: 353 IILIGK 358
ILIGK
Sbjct: 245 AILIGK 250
>gi|418576057|ref|ZP_13140203.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325119|gb|EHY92251.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 299
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM + D I+ +V+ + R DE + + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMHVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDML--KTIKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGE+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGELIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|206971303|ref|ZP_03232254.1| GTP-binding protein Era [Bacillus cereus AH1134]
gi|365158912|ref|ZP_09355100.1| GTPase Era [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411903|ref|ZP_17389023.1| GTPase Era [Bacillus cereus BAG3O-2]
gi|423426433|ref|ZP_17403464.1| GTPase Era [Bacillus cereus BAG3X2-2]
gi|423432311|ref|ZP_17409315.1| GTPase Era [Bacillus cereus BAG4O-1]
gi|423437746|ref|ZP_17414727.1| GTPase Era [Bacillus cereus BAG4X12-1]
gi|423503014|ref|ZP_17479606.1| GTPase Era [Bacillus cereus HD73]
gi|423582508|ref|ZP_17558619.1| GTPase Era [Bacillus cereus VD014]
gi|423634876|ref|ZP_17610529.1| GTPase Era [Bacillus cereus VD156]
gi|449091263|ref|YP_007423704.1| GTP-binding protein Era [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|206734075|gb|EDZ51246.1| GTP-binding protein Era [Bacillus cereus AH1134]
gi|363626076|gb|EHL77080.1| GTPase Era [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103971|gb|EJQ11948.1| GTPase Era [Bacillus cereus BAG3O-2]
gi|401111180|gb|EJQ19079.1| GTPase Era [Bacillus cereus BAG3X2-2]
gi|401117067|gb|EJQ24905.1| GTPase Era [Bacillus cereus BAG4O-1]
gi|401120901|gb|EJQ28697.1| GTPase Era [Bacillus cereus BAG4X12-1]
gi|401213387|gb|EJR20128.1| GTPase Era [Bacillus cereus VD014]
gi|401278862|gb|EJR84792.1| GTPase Era [Bacillus cereus VD156]
gi|402459235|gb|EJV90972.1| GTPase Era [Bacillus cereus HD73]
gi|449025020|gb|AGE80183.1| GTP-binding protein Era [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 301
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP Y
Sbjct: 119 VFLVINKIDQLHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|420174669|ref|ZP_14681117.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM061]
gi|420192318|ref|ZP_14698178.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM023]
gi|394244573|gb|EJD89908.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM061]
gi|394261529|gb|EJE06326.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM023]
Length = 299
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGMNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|75761897|ref|ZP_00741822.1| GTP-binding protein era [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218899466|ref|YP_002447877.1| GTP-binding protein Era [Bacillus cereus G9842]
gi|402564235|ref|YP_006606959.1| GTPase Era [Bacillus thuringiensis HD-771]
gi|423358663|ref|ZP_17336166.1| GTPase Era [Bacillus cereus VD022]
gi|423561232|ref|ZP_17537508.1| GTPase Era [Bacillus cereus MSX-A1]
gi|434377467|ref|YP_006612111.1| GTPase Era [Bacillus thuringiensis HD-789]
gi|74490605|gb|EAO53896.1| GTP-binding protein era [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218541393|gb|ACK93787.1| GTP-binding protein Era [Bacillus cereus G9842]
gi|401084535|gb|EJP92781.1| GTPase Era [Bacillus cereus VD022]
gi|401201489|gb|EJR08354.1| GTPase Era [Bacillus cereus MSX-A1]
gi|401792887|gb|AFQ18926.1| GTPase Era [Bacillus thuringiensis HD-771]
gi|401876024|gb|AFQ28191.1| GTPase Era [Bacillus thuringiensis HD-789]
Length = 301
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP Y
Sbjct: 119 VFLVINKIDQLHPEQLLELIDQYRKLHEFAEIVPISALDGNNVDALIGTIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIIAELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|299535811|ref|ZP_07049132.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZC1]
gi|424735372|ref|ZP_18163836.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZB2]
gi|298729011|gb|EFI69565.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZC1]
gi|422950574|gb|EKU44942.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis
ZB2]
Length = 305
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 161/254 (63%), Gaps = 7/254 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI DTPG
Sbjct: 8 YKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDDSQMIFIDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILL 231
I + K H L M+K ++ D I+ +V+A + + DE ILE G+ P+ L
Sbjct: 68 IHKPK-HKLGDFMLKVSKNTLREVDVIMFMVNAEQKLGKGDEFILEMLAGN---PTPVFL 123
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P E+ +E Y++ D E++P+SA G+ VE++ + LP GP YYP
Sbjct: 124 VINKIDAIHPDELMGIIESYKERYDFAEIVPISALQGNNVENLLVTLAKYLPEGPQYYPA 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D V++HPERF + E+IREK+ R E+P++ V + + +D I V I+VE++
Sbjct: 184 DQVTDHPERFIISELIREKVLHLTREEIPHSIAVVIDKIRRDEENEDKIHVAATIIVERD 243
Query: 350 SQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 244 SQKGIVIGKRGALL 257
>gi|169829166|ref|YP_001699324.1| GTP-binding protein Era [Lysinibacillus sphaericus C3-41]
gi|254783660|sp|B1HTJ0.1|ERA_LYSSC RecName: Full=GTPase Era
gi|168993654|gb|ACA41194.1| GTP-binding protein era-like protein (Bex protein) [Lysinibacillus
sphaericus C3-41]
Length = 305
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 160/257 (62%), Gaps = 5/257 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI
Sbjct: 4 TRSGYKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTTDSQMIFI 63
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D I+ +V+A + + DE + E + + P
Sbjct: 64 DTPGIHKPK-HKLGDFMLKVAKNTLREVDVIMFMVNAEQKLGKGDEFILEMLAG--NSTP 120
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P E+ +E Y++ + E+IP+SA G+ VE + D + LP GP Y
Sbjct: 121 VFLVINKIDQIHPDELLGIIESYKERYEFAEIIPISALQGNNVESLLDTLPKYLPEGPQY 180
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVV 346
YP D V++HPERF + E+IREK+ R E+P++ V + + D I V I+V
Sbjct: 181 YPADQVTDHPERFIIYELIREKVLHLTREEIPHSIAVVIDKIRRDEENNDKIHVAATIMV 240
Query: 347 EKNSQKIILIGKVSPFL 363
E++SQK I+IGK L
Sbjct: 241 ERDSQKGIVIGKRGALL 257
>gi|403070154|ref|ZP_10911486.1| GTP-binding protein [Oceanobacillus sp. Ndiop]
Length = 302
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 161/255 (63%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ N KSG++ ++G+PNVGKST N++IGQK++I+++K QTTR++I G+ + + QM+
Sbjct: 3 TNSNFKSGFITIIGRPNVGKSTFMNRVIGQKIAIMSDKAQTTRNKIQGVLTTDDAQMVFI 62
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K + D ++ +++A + + D+ + + + + K P
Sbjct: 63 DTPGIHKPK-HRLGDFMVKVAENTLNEVDAVLFMINAKEGYGKGDQYILDLLKNVKG--P 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK DLI P E+ +E Y+ + +E+IP+SA G+ V+ + D + LP GP Y
Sbjct: 120 VYLIINKIDLIHPEEVFSLIEQYKDKGNFEEIIPISALEGNNVDHLVDVLKGHLPEGPQY 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ + E+P++ V + + + R K IQ IV E+
Sbjct: 180 YPADQVTDHPERFVISELIREKVLHLTKEEIPHSIAVVIENIEKREQEKLLIQAIIVTER 239
Query: 349 NSQKIILIGKVSPFL 363
++QK ILIGK L
Sbjct: 240 STQKGILIGKQGSML 254
>gi|385812271|ref|YP_005848662.1| GTP-binding protein Era [Lactobacillus fermentum CECT 5716]
gi|299783168|gb|ADJ41166.1| GTP-binding protein Era [Lactobacillus fermentum CECT 5716]
Length = 301
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 154/254 (60%), Gaps = 3/254 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N M+GQK++I++N QTTR++I GI + E Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYMVGQKVAIMSNVAQTTRNKIQGIYTSDEAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI K L M ++ SA D I+ +V A + D + E + K + PI
Sbjct: 63 TPGI-HKPQTRLGXFMERSALSALDEVDAILFVVPANEKRGAGDNFIIERL--KKVQQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D + P ++ + YE +V+PVSA G+ V + + ++ +LP GP YY
Sbjct: 120 YLVVNKIDQVNPNDLPDIIAQYEGALPFKKVVPVSALQGNNVNTLINDLVDQLPTGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D VS+HPERF + E+IREK+F+ R EVP++ ++V S + + I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLNTREEVPHSVAIDVTSIQREDDETIHVSANIIVERP 239
Query: 350 SQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 GQKGIIIGKGGSML 253
>gi|29376905|ref|NP_816059.1| GTP-binding protein Era [Enterococcus faecalis V583]
gi|227519872|ref|ZP_03949921.1| GTP-binding protein Era [Enterococcus faecalis TX0104]
gi|227553941|ref|ZP_03983988.1| GTP-binding protein Era [Enterococcus faecalis HH22]
gi|229549418|ref|ZP_04438143.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29200]
gi|255975189|ref|ZP_05425775.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T2]
gi|256617033|ref|ZP_05473879.1| GTP-binding protein Era [Enterococcus faecalis ATCC 4200]
gi|256763103|ref|ZP_05503683.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T3]
gi|256853771|ref|ZP_05559136.1| GTP-binding protein Era [Enterococcus faecalis T8]
gi|256956687|ref|ZP_05560858.1| GTP-binding protein Era [Enterococcus faecalis DS5]
gi|256961296|ref|ZP_05565467.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Merz96]
gi|256963577|ref|ZP_05567748.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis HIP11704]
gi|257079642|ref|ZP_05574003.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis JH1]
gi|257082012|ref|ZP_05576373.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis E1Sol]
gi|257084563|ref|ZP_05578924.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Fly1]
gi|257087441|ref|ZP_05581802.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis D6]
gi|257090600|ref|ZP_05584961.1| small GTP-binding protein [Enterococcus faecalis CH188]
gi|257416648|ref|ZP_05593642.1| GTP-binding protein Era [Enterococcus faecalis ARO1/DG]
gi|257419864|ref|ZP_05596858.1| small GTP-binding protein Era [Enterococcus faecalis T11]
gi|257421948|ref|ZP_05598938.1| GTP-binding protein Era [Enterococcus faecalis X98]
gi|293383580|ref|ZP_06629490.1| GTP-binding protein Era [Enterococcus faecalis R712]
gi|293387307|ref|ZP_06631863.1| GTP-binding protein Era [Enterococcus faecalis S613]
gi|294780922|ref|ZP_06746276.1| GTP-binding protein Era [Enterococcus faecalis PC1.1]
gi|307270833|ref|ZP_07552121.1| GTP-binding protein Era [Enterococcus faecalis TX4248]
gi|307271516|ref|ZP_07552788.1| GTP-binding protein Era [Enterococcus faecalis TX0855]
gi|307277156|ref|ZP_07558260.1| GTP-binding protein Era [Enterococcus faecalis TX2134]
gi|307285808|ref|ZP_07565942.1| GTP-binding protein Era [Enterococcus faecalis TX0860]
gi|307287711|ref|ZP_07567754.1| GTP-binding protein Era [Enterococcus faecalis TX0109]
gi|307290538|ref|ZP_07570450.1| GTP-binding protein Era [Enterococcus faecalis TX0411]
gi|312899839|ref|ZP_07759158.1| GTP-binding protein Era [Enterococcus faecalis TX0470]
gi|312905132|ref|ZP_07764253.1| GTP-binding protein Era [Enterococcus faecalis TX0635]
gi|312906130|ref|ZP_07765142.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 512]
gi|312909476|ref|ZP_07768331.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 516]
gi|312953489|ref|ZP_07772329.1| GTP-binding protein Era [Enterococcus faecalis TX0102]
gi|384513806|ref|YP_005708899.1| GTP-binding protein Era [Enterococcus faecalis OG1RF]
gi|384519266|ref|YP_005706571.1| GTP-binding protein Era [Enterococcus faecalis 62]
gi|397700599|ref|YP_006538387.1| GTP-binding protein Era [Enterococcus faecalis D32]
gi|421513047|ref|ZP_15959835.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29212]
gi|422685105|ref|ZP_16743330.1| GTP-binding protein Era [Enterococcus faecalis TX4000]
gi|422687890|ref|ZP_16746061.1| GTP-binding protein Era [Enterococcus faecalis TX0630]
gi|422693246|ref|ZP_16751260.1| GTP-binding protein Era [Enterococcus faecalis TX0031]
gi|422695915|ref|ZP_16753893.1| GTP-binding protein Era [Enterococcus faecalis TX4244]
gi|422697838|ref|ZP_16755769.1| GTP-binding protein Era [Enterococcus faecalis TX1346]
gi|422701351|ref|ZP_16759192.1| GTP-binding protein Era [Enterococcus faecalis TX1342]
gi|422703689|ref|ZP_16761509.1| GTP-binding protein Era [Enterococcus faecalis TX1302]
gi|422706985|ref|ZP_16764682.1| GTP-binding protein Era [Enterococcus faecalis TX0043]
gi|422709889|ref|ZP_16767235.1| GTP-binding protein Era [Enterococcus faecalis TX0027]
gi|422714953|ref|ZP_16771677.1| GTP-binding protein Era [Enterococcus faecalis TX0309A]
gi|422717369|ref|ZP_16774054.1| GTP-binding protein Era [Enterococcus faecalis TX0309B]
gi|422719864|ref|ZP_16776487.1| GTP-binding protein Era [Enterococcus faecalis TX0017]
gi|422724756|ref|ZP_16781232.1| GTP-binding protein Era [Enterococcus faecalis TX2137]
gi|422725961|ref|ZP_16782418.1| GTP-binding protein Era [Enterococcus faecalis TX0312]
gi|422729550|ref|ZP_16785951.1| GTP-binding protein Era [Enterococcus faecalis TX0012]
gi|422732311|ref|ZP_16788651.1| GTP-binding protein Era [Enterococcus faecalis TX0645]
gi|422736788|ref|ZP_16793050.1| GTP-binding protein Era [Enterococcus faecalis TX1341]
gi|422739371|ref|ZP_16794552.1| GTP-binding protein Era [Enterococcus faecalis TX2141]
gi|424675672|ref|ZP_18112569.1| ribosome biogenesis GTPase Era [Enterococcus faecalis 599]
gi|424676229|ref|ZP_18113106.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV103]
gi|424680596|ref|ZP_18117399.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV116]
gi|424683114|ref|ZP_18119868.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV129]
gi|424686680|ref|ZP_18123346.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV25]
gi|424689554|ref|ZP_18126125.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV31]
gi|424694086|ref|ZP_18130495.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV37]
gi|424697665|ref|ZP_18133987.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV41]
gi|424700161|ref|ZP_18136359.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV62]
gi|424702997|ref|ZP_18139134.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV63]
gi|424710176|ref|ZP_18143642.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV65]
gi|424717864|ref|ZP_18147138.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV68]
gi|424721089|ref|ZP_18150187.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV72]
gi|424725055|ref|ZP_18153982.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV73]
gi|424727291|ref|ZP_18155924.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV81]
gi|424742080|ref|ZP_18170414.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV85]
gi|424751211|ref|ZP_18179243.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV93]
gi|424760585|ref|ZP_18188197.1| ribosome biogenesis GTPase Era [Enterococcus faecalis R508]
gi|428767617|ref|YP_007153728.1| GTP-binding protein era homolog [Enterococcus faecalis str.
Symbioflor 1]
gi|430359665|ref|ZP_19425917.1| GTP-binding protein Era [Enterococcus faecalis OG1X]
gi|430370086|ref|ZP_19428885.1| GTP-binding protein Era [Enterococcus faecalis M7]
gi|81436511|sp|Q831T9.1|ERA_ENTFA RecName: Full=GTPase Era
gi|29344370|gb|AAO82129.1| GTP-binding protein Era [Enterococcus faecalis V583]
gi|227072666|gb|EEI10629.1| GTP-binding protein Era [Enterococcus faecalis TX0104]
gi|227176927|gb|EEI57899.1| GTP-binding protein Era [Enterococcus faecalis HH22]
gi|229305655|gb|EEN71651.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29200]
gi|255968061|gb|EET98683.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T2]
gi|256596560|gb|EEU15736.1| GTP-binding protein Era [Enterococcus faecalis ATCC 4200]
gi|256684354|gb|EEU24049.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T3]
gi|256710714|gb|EEU25757.1| GTP-binding protein Era [Enterococcus faecalis T8]
gi|256947183|gb|EEU63815.1| GTP-binding protein Era [Enterococcus faecalis DS5]
gi|256951792|gb|EEU68424.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Merz96]
gi|256954073|gb|EEU70705.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis HIP11704]
gi|256987672|gb|EEU74974.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis JH1]
gi|256990042|gb|EEU77344.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis E1Sol]
gi|256992593|gb|EEU79895.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Fly1]
gi|256995471|gb|EEU82773.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis D6]
gi|256999412|gb|EEU85932.1| small GTP-binding protein [Enterococcus faecalis CH188]
gi|257158476|gb|EEU88436.1| GTP-binding protein Era [Enterococcus faecalis ARO1/DG]
gi|257161692|gb|EEU91652.1| small GTP-binding protein Era [Enterococcus faecalis T11]
gi|257163772|gb|EEU93732.1| GTP-binding protein Era [Enterococcus faecalis X98]
gi|291079092|gb|EFE16456.1| GTP-binding protein Era [Enterococcus faecalis R712]
gi|291083205|gb|EFE20168.1| GTP-binding protein Era [Enterococcus faecalis S613]
gi|294452048|gb|EFG20496.1| GTP-binding protein Era [Enterococcus faecalis PC1.1]
gi|295113464|emb|CBL32101.1| GTP-binding protein Era [Enterococcus sp. 7L76]
gi|306498393|gb|EFM67898.1| GTP-binding protein Era [Enterococcus faecalis TX0411]
gi|306501449|gb|EFM70752.1| GTP-binding protein Era [Enterococcus faecalis TX0109]
gi|306502569|gb|EFM71836.1| GTP-binding protein Era [Enterococcus faecalis TX0860]
gi|306506086|gb|EFM75252.1| GTP-binding protein Era [Enterococcus faecalis TX2134]
gi|306511788|gb|EFM80786.1| GTP-binding protein Era [Enterococcus faecalis TX0855]
gi|306512834|gb|EFM81478.1| GTP-binding protein Era [Enterococcus faecalis TX4248]
gi|310627776|gb|EFQ11059.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 512]
gi|310628698|gb|EFQ11981.1| GTP-binding protein Era [Enterococcus faecalis TX0102]
gi|310631522|gb|EFQ14805.1| GTP-binding protein Era [Enterococcus faecalis TX0635]
gi|311290149|gb|EFQ68705.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 516]
gi|311293089|gb|EFQ71645.1| GTP-binding protein Era [Enterococcus faecalis TX0470]
gi|315025403|gb|EFT37335.1| GTP-binding protein Era [Enterococcus faecalis TX2137]
gi|315030211|gb|EFT42143.1| GTP-binding protein Era [Enterococcus faecalis TX4000]
gi|315032903|gb|EFT44835.1| GTP-binding protein Era [Enterococcus faecalis TX0017]
gi|315035613|gb|EFT47545.1| GTP-binding protein Era [Enterococcus faecalis TX0027]
gi|315144805|gb|EFT88821.1| GTP-binding protein Era [Enterococcus faecalis TX2141]
gi|315146685|gb|EFT90701.1| GTP-binding protein Era [Enterococcus faecalis TX4244]
gi|315150151|gb|EFT94167.1| GTP-binding protein Era [Enterococcus faecalis TX0012]
gi|315152156|gb|EFT96172.1| GTP-binding protein Era [Enterococcus faecalis TX0031]
gi|315155343|gb|EFT99359.1| GTP-binding protein Era [Enterococcus faecalis TX0043]
gi|315159081|gb|EFU03098.1| GTP-binding protein Era [Enterococcus faecalis TX0312]
gi|315161673|gb|EFU05690.1| GTP-binding protein Era [Enterococcus faecalis TX0645]
gi|315164810|gb|EFU08827.1| GTP-binding protein Era [Enterococcus faecalis TX1302]
gi|315166396|gb|EFU10413.1| GTP-binding protein Era [Enterococcus faecalis TX1341]
gi|315170292|gb|EFU14309.1| GTP-binding protein Era [Enterococcus faecalis TX1342]
gi|315173673|gb|EFU17690.1| GTP-binding protein Era [Enterococcus faecalis TX1346]
gi|315574358|gb|EFU86549.1| GTP-binding protein Era [Enterococcus faecalis TX0309B]
gi|315579040|gb|EFU91231.1| GTP-binding protein Era [Enterococcus faecalis TX0630]
gi|315580167|gb|EFU92358.1| GTP-binding protein Era [Enterococcus faecalis TX0309A]
gi|323481399|gb|ADX80838.1| GTP-binding protein Era [Enterococcus faecalis 62]
gi|327535695|gb|AEA94529.1| GTP-binding protein Era [Enterococcus faecalis OG1RF]
gi|397337238|gb|AFO44910.1| GTP-binding protein Era [Enterococcus faecalis D32]
gi|401673876|gb|EJS80246.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29212]
gi|402350308|gb|EJU85212.1| ribosome biogenesis GTPase Era [Enterococcus faecalis 599]
gi|402353894|gb|EJU88716.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV116]
gi|402357488|gb|EJU92195.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV103]
gi|402365880|gb|EJV00294.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV129]
gi|402367075|gb|EJV01426.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV25]
gi|402367639|gb|EJV01978.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV31]
gi|402371868|gb|EJV06012.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV37]
gi|402374537|gb|EJV08553.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV62]
gi|402375196|gb|EJV09188.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV41]
gi|402383604|gb|EJV17199.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV68]
gi|402383888|gb|EJV17467.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV65]
gi|402385652|gb|EJV19184.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV63]
gi|402392285|gb|EJV25549.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV72]
gi|402392330|gb|EJV25593.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV73]
gi|402397194|gb|EJV30225.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV81]
gi|402400982|gb|EJV33785.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV85]
gi|402403278|gb|EJV35957.1| ribosome biogenesis GTPase Era [Enterococcus faecalis R508]
gi|402405765|gb|EJV38349.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV93]
gi|427185790|emb|CCO73014.1| GTP-binding protein era homolog [Enterococcus faecalis str.
Symbioflor 1]
gi|429513289|gb|ELA02876.1| GTP-binding protein Era [Enterococcus faecalis OG1X]
gi|429515635|gb|ELA05146.1| GTP-binding protein Era [Enterococcus faecalis M7]
Length = 300
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 155/239 (64%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++HPE F V E+IREK+ + R+E+P++ V V S K K +Q I+VE++SQ
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAVVVDSMKRDENDKVHVQATIIVERDSQ 240
>gi|418614664|ref|ZP_13177626.1| GTP-binding protein Era [Staphylococcus epidermidis VCU118]
gi|374819200|gb|EHR83328.1| GTP-binding protein Era [Staphylococcus epidermidis VCU118]
Length = 299
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSYLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|289550662|ref|YP_003471566.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01]
gi|315658157|ref|ZP_07911029.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590]
gi|385784288|ref|YP_005760461.1| putative GTP-binding protein [Staphylococcus lugdunensis N920143]
gi|418413964|ref|ZP_12987180.1| GTPase Era [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635809|ref|ZP_13198168.1| GTP-binding protein Era [Staphylococcus lugdunensis VCU139]
gi|289180194|gb|ADC87439.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01]
gi|315496486|gb|EFU84809.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590]
gi|339894544|emb|CCB53826.1| putative GTP-binding protein [Staphylococcus lugdunensis N920143]
gi|374841497|gb|EHS04969.1| GTP-binding protein Era [Staphylococcus lugdunensis VCU139]
gi|410877602|gb|EKS25494.1| GTPase Era [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 299
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMDML--RNVKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + ++E Y+K+ + E++P+SA G V+ D + + LP GP YYP D
Sbjct: 121 LNKIDLVHPDSLMPRIEAYQKYMNFTEIVPISALEGLNVDHFIDVLKSHLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKENEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|256819059|ref|YP_003140338.1| GTP-binding protein Era [Capnocytophaga ochracea DSM 7271]
gi|256580642|gb|ACU91777.1| GTP-binding protein Era [Capnocytophaga ochracea DSM 7271]
Length = 293
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 158/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PIL 230
II K + L + MM V+SA +AD ++ +V+ + E+ +E + ++L P+L
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFNRINQLDVPVL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + +++ ++++ E+ P+SA E + + I+ LP PA++P
Sbjct: 116 LLINKVDTSDQNVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFP 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ S
Sbjct: 176 KDQLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERES 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|375309443|ref|ZP_09774724.1| gtp-binding protein era [Paenibacillus sp. Aloe-11]
gi|375078752|gb|EHS56979.1| gtp-binding protein era [Paenibacillus sp. Aloe-11]
Length = 300
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+++ + D M + G + ++ L+DA + D + E + + + P++LVL
Sbjct: 67 HKRQSKLGDYMNQTAFNALG-EVEAVLFLIDAAEGLGGGDRFIVEQL--KQVRTPVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+P + +E Y K D E++P+SAK G+ V+ + + + LP GP YYP D
Sbjct: 124 NKIDRIEPEALLPLIEQYRKLYDFAEIVPISAKMGNNVDRLLEQLQKYLPEGPQYYPDDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F + E++REKI R EVP++ V + K + I I VE++SQK
Sbjct: 184 ITDHPEQFVIAELVREKILHMTREEVPHSIAVMIEDMKVQDNGVVHIMAVIFVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGAML 253
>gi|229545169|ref|ZP_04433894.1| GTP-binding protein Era [Enterococcus faecalis TX1322]
gi|229309714|gb|EEN75701.1| GTP-binding protein Era [Enterococcus faecalis TX1322]
Length = 300
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 155/239 (64%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++HPE F V E+IREK+ + R+E+P++ V V S K K +Q I+VE++SQ
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAVVVDSMKRDENYKVHVQATIIVERDSQ 240
>gi|423389383|ref|ZP_17366609.1| GTPase Era [Bacillus cereus BAG1X1-3]
gi|423400853|ref|ZP_17378026.1| GTPase Era [Bacillus cereus BAG2X1-2]
gi|423417775|ref|ZP_17394864.1| GTPase Era [Bacillus cereus BAG3X2-1]
gi|423457451|ref|ZP_17434248.1| GTPase Era [Bacillus cereus BAG5X2-1]
gi|423478442|ref|ZP_17455157.1| GTPase Era [Bacillus cereus BAG6X1-1]
gi|401106946|gb|EJQ14903.1| GTPase Era [Bacillus cereus BAG3X2-1]
gi|401147835|gb|EJQ55328.1| GTPase Era [Bacillus cereus BAG5X2-1]
gi|401641474|gb|EJS59191.1| GTPase Era [Bacillus cereus BAG1X1-3]
gi|401653843|gb|EJS71386.1| GTPase Era [Bacillus cereus BAG2X1-2]
gi|402428604|gb|EJV60701.1| GTPase Era [Bacillus cereus BAG6X1-1]
Length = 301
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I
Sbjct: 2 NRKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y K + E++P+SA G+ V+ + I LP GP Y
Sbjct: 119 VFLVINKIDQLHPEQLLELIDQYRKLYEFAEIVPISALDGNNVDALIGTIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP + V++HPERF + E+IREK+ R EVP++ V + + + R +I IVVE+
Sbjct: 179 YPDNQVTDHPERFIISELIREKVLHLTREEVPHSVAVVIDAIQKREGGAVYINATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 ASQKGIIIGKQGKML 253
>gi|301066560|ref|YP_003788583.1| GTPase [Lactobacillus casei str. Zhang]
gi|300438967|gb|ADK18733.1| GTPase [Lactobacillus casei str. Zhang]
Length = 300
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 161/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFVNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|225011396|ref|ZP_03701834.1| GTP-binding protein Era [Flavobacteria bacterium MS024-2A]
gi|225003899|gb|EEG41871.1| GTP-binding protein Era [Flavobacteria bacterium MS024-2A]
Length = 296
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 157/254 (61%), Gaps = 23/254 (9%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G PNVGKSTL N ++G++LSI+T K QTTRHRILGI +G ++QM+L DTPG
Sbjct: 6 HKSGFISIVGNPNVGKSTLMNALVGKELSIITAKAQTTRHRILGIINGDDFQMVLSDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+I+ M S MM V+ A I+ D +V LV + + E DE L E + K K P+L++
Sbjct: 66 VIKPAYEMQTS-MMNFVKEALIDGDVLVYLV-SPEETELKDEKLFEKI--KKTKAPLLIL 121
Query: 233 LNKKDLIKPGEI-AKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DLI + A L W +F V P+SA G V ++ D ++ LP PAY+PK
Sbjct: 122 INKIDLISQEALEASVLHWQTEFPKAT-VYPISALTGFFVPELLDILIGHLPESPAYFPK 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--------IQVE 343
D +++ PERFFV E IRE+I Y E+PYA +V +DF I+
Sbjct: 181 DQLTDKPERFFVNESIREQILELYSKEIPYAVEV---------VTEDFLEDSKIIKIRSV 231
Query: 344 IVVEKNSQKIILIG 357
I+VE+ +QK I+IG
Sbjct: 232 IMVERETQKGIIIG 245
>gi|57867009|ref|YP_188710.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A]
gi|418612786|ref|ZP_13175810.1| GTP-binding protein Era [Staphylococcus epidermidis VCU117]
gi|418626405|ref|ZP_13189017.1| GTP-binding protein Era [Staphylococcus epidermidis VCU126]
gi|81674466|sp|Q5HNY0.1|ERA_STAEQ RecName: Full=GTPase Era
gi|57637667|gb|AAW54455.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A]
gi|374817863|gb|EHR82038.1| GTP-binding protein Era [Staphylococcus epidermidis VCU117]
gi|374832839|gb|EHR96544.1| GTP-binding protein Era [Staphylococcus epidermidis VCU126]
Length = 299
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIETTIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|255972122|ref|ZP_05422708.1| GTP-binding protein Era [Enterococcus faecalis T1]
gi|255963140|gb|EET95616.1| GTP-binding protein Era [Enterococcus faecalis T1]
Length = 300
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 155/239 (64%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HCLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++HPE F V E+IREK+ + R+E+P++ V V S K K +Q I+VE++SQ
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAVVVDSMKRDENDKVHVQATIIVERDSQ 240
>gi|336172729|ref|YP_004579867.1| GTP-binding protein Era-like-protein [Lacinutrix sp. 5H-3-7-4]
gi|334727301|gb|AEH01439.1| GTP-binding protein Era-like-protein [Lacinutrix sp. 5H-3-7-4]
Length = 293
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 161/248 (64%), Gaps = 9/248 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G +Q++L DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGENFQVVLSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L + MM V+SA +AD ++ +V+ + E DE + + K+P+LL
Sbjct: 62 GII-KPAYELQASMMDFVKSAFDDADLLIYMVEIGEK-ELKDEAFFNKITNA--KIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK D ++ ++++ + E+I +SA G V+++ D I+ LP P +YPK
Sbjct: 118 LLNKIDKSNQVQLEEQVQLWATKVPNAEIIAISALEGFNVKEVFDRIIELLPESPPFYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFF+ E IREKI M Y+ E+PYA +++ + ++ I+V I+VE+
Sbjct: 178 DQLTDKPERFFINETIREKILMHYKKEIPYAVEIDTEEFF---EEEEIIRVRSVIMVERE 234
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 235 TQKGIIIG 242
>gi|27468172|ref|NP_764809.1| GTP-binding protein Era [Staphylococcus epidermidis ATCC 12228]
gi|251810984|ref|ZP_04825457.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060]
gi|282876007|ref|ZP_06284874.1| GTP-binding protein Era [Staphylococcus epidermidis SK135]
gi|293366472|ref|ZP_06613149.1| GTP-binding protein Era [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417647011|ref|ZP_12296860.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU144]
gi|417655966|ref|ZP_12305657.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU028]
gi|417659631|ref|ZP_12309231.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU045]
gi|417908663|ref|ZP_12552420.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU037]
gi|417912203|ref|ZP_12555898.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU105]
gi|417913713|ref|ZP_12557376.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU109]
gi|418325625|ref|ZP_12936831.1| GTP-binding protein Era [Staphylococcus epidermidis VCU071]
gi|418328382|ref|ZP_12939497.1| GTP-binding protein Era [Staphylococcus epidermidis 14.1.R1.SE]
gi|418606698|ref|ZP_13169968.1| GTP-binding protein Era [Staphylococcus epidermidis VCU057]
gi|418609422|ref|ZP_13172574.1| GTP-binding protein Era [Staphylococcus epidermidis VCU065]
gi|418621370|ref|ZP_13184146.1| GTP-binding protein Era [Staphylococcus epidermidis VCU123]
gi|418625271|ref|ZP_13187924.1| GTP-binding protein Era [Staphylococcus epidermidis VCU125]
gi|418629390|ref|ZP_13191898.1| GTP-binding protein Era [Staphylococcus epidermidis VCU127]
gi|418630474|ref|ZP_13192955.1| GTP-binding protein Era [Staphylococcus epidermidis VCU128]
gi|418665173|ref|ZP_13226623.1| GTP-binding protein Era [Staphylococcus epidermidis VCU081]
gi|419769466|ref|ZP_14295560.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771680|ref|ZP_14297726.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-K]
gi|420163061|ref|ZP_14669808.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM095]
gi|420165560|ref|ZP_14672251.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM088]
gi|420167964|ref|ZP_14674616.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM087]
gi|420170276|ref|ZP_14676837.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM070]
gi|420172620|ref|ZP_14679119.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM067]
gi|420184540|ref|ZP_14690649.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM040]
gi|420187229|ref|ZP_14693250.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM039]
gi|420197447|ref|ZP_14703171.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM020]
gi|420201697|ref|ZP_14707307.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM018]
gi|420206114|ref|ZP_14711624.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM008]
gi|420209073|ref|ZP_14714511.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM003]
gi|420211230|ref|ZP_14716604.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM001]
gi|420221646|ref|ZP_14726573.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH08001]
gi|420225764|ref|ZP_14730591.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH06004]
gi|420227355|ref|ZP_14732125.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05003]
gi|420229671|ref|ZP_14734376.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04003]
gi|421606938|ref|ZP_16048189.1| GTPase Era [Staphylococcus epidermidis AU12-03]
gi|38257330|sp|Q8CP21.1|ERA_STAES RecName: Full=GTPase Era
gi|27315718|gb|AAO04853.1|AE016748_87 GTP-binding protein (Era/TrmE family) [Staphylococcus epidermidis
ATCC 12228]
gi|251805494|gb|EES58151.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060]
gi|281295032|gb|EFA87559.1| GTP-binding protein Era [Staphylococcus epidermidis SK135]
gi|291319241|gb|EFE59610.1| GTP-binding protein Era [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329725360|gb|EGG61843.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU144]
gi|329735268|gb|EGG71560.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU045]
gi|329737216|gb|EGG73470.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU028]
gi|341651214|gb|EGS75019.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU105]
gi|341654735|gb|EGS78473.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU109]
gi|341656024|gb|EGS79747.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU037]
gi|365228227|gb|EHM69412.1| GTP-binding protein Era [Staphylococcus epidermidis VCU071]
gi|365232040|gb|EHM73053.1| GTP-binding protein Era [Staphylococcus epidermidis 14.1.R1.SE]
gi|374407474|gb|EHQ78336.1| GTP-binding protein Era [Staphylococcus epidermidis VCU057]
gi|374407636|gb|EHQ78488.1| GTP-binding protein Era [Staphylococcus epidermidis VCU065]
gi|374409148|gb|EHQ79948.1| GTP-binding protein Era [Staphylococcus epidermidis VCU081]
gi|374825413|gb|EHR89349.1| GTP-binding protein Era [Staphylococcus epidermidis VCU125]
gi|374829314|gb|EHR93118.1| GTP-binding protein Era [Staphylococcus epidermidis VCU123]
gi|374834093|gb|EHR97753.1| GTP-binding protein Era [Staphylococcus epidermidis VCU127]
gi|374837664|gb|EHS01227.1| GTP-binding protein Era [Staphylococcus epidermidis VCU128]
gi|383358085|gb|EID35546.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360499|gb|EID37894.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-K]
gi|394234750|gb|EJD80324.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM095]
gi|394235361|gb|EJD80933.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM088]
gi|394237992|gb|EJD83478.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM087]
gi|394240614|gb|EJD86037.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM070]
gi|394241781|gb|EJD87190.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM067]
gi|394256208|gb|EJE01141.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM039]
gi|394257191|gb|EJE02113.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM040]
gi|394266254|gb|EJE10900.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM020]
gi|394271965|gb|EJE16444.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM018]
gi|394277953|gb|EJE22270.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM008]
gi|394279301|gb|EJE23609.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM003]
gi|394281683|gb|EJE25909.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM001]
gi|394290272|gb|EJE34136.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH08001]
gi|394293198|gb|EJE36921.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH06004]
gi|394297224|gb|EJE40831.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05003]
gi|394298965|gb|EJE42520.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04003]
gi|406657407|gb|EKC83795.1| GTPase Era [Staphylococcus epidermidis AU12-03]
Length = 299
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|116333398|ref|YP_794925.1| GTPase [Lactobacillus brevis ATCC 367]
gi|116098745|gb|ABJ63894.1| GTPase [Lactobacillus brevis ATCC 367]
Length = 301
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 161/261 (61%), Gaps = 17/261 (6%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+P++KSG+VA++G+PNVGKST N++IGQK++I++N QTTR++I GI + E Q++ D
Sbjct: 3 NPDYKSGFVAIVGRPNVGKSTFLNRVIGQKIAIMSNTAQTTRNKIQGIYTTDEAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------ 223
TPG+ + K + D M+++ SA D ++ +V+A + + G GD+
Sbjct: 63 TPGVHKPKSKLGD-YMVQSAMSALNEVDAVLFMVNAAE---------KRGAGDNFIIDRL 112
Query: 224 -KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 282
K P+ L++NK D +KP ++ +E Y+ V P+SA G+ V+++ ++ ++
Sbjct: 113 KNVKAPVYLLINKIDQVKPDDLLPVMEQYQTALPWKAVYPISALEGNNVDELLTGLVEQM 172
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP YYP D V++HPERF V E+IREKIFM R EVP++ V + S K + I+
Sbjct: 173 PNGPQYYPADQVTDHPERFVVSELIREKIFMLTREEVPHSVAVEIESMKQKDEDHVHIEA 232
Query: 343 EIVVEKNSQKIILIGKVSPFL 363
I+VE+ +QK I+IGK L
Sbjct: 233 TIIVERPTQKGIMIGKGGSML 253
>gi|191638504|ref|YP_001987670.1| GTP-binding protein Era [Lactobacillus casei BL23]
gi|385820212|ref|YP_005856599.1| GTP-binding protein Era [Lactobacillus casei LC2W]
gi|385823409|ref|YP_005859751.1| GTP-binding protein Era [Lactobacillus casei BD-II]
gi|409997364|ref|YP_006751765.1| GTPase Era [Lactobacillus casei W56]
gi|226741221|sp|B3WEL1.1|ERA_LACCB RecName: Full=GTPase Era
gi|190712806|emb|CAQ66812.1| GTP-binding protein era homolog [Lactobacillus casei BL23]
gi|327382539|gb|AEA54015.1| GTP-binding protein Era [Lactobacillus casei LC2W]
gi|327385736|gb|AEA57210.1| GTP-binding protein Era [Lactobacillus casei BD-II]
gi|406358376|emb|CCK22646.1| GTPase Era [Lactobacillus casei W56]
Length = 300
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 161/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|239631408|ref|ZP_04674439.1| GTPase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|417980798|ref|ZP_12621477.1| GTP-binding protein [Lactobacillus casei 12A]
gi|417983530|ref|ZP_12624166.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|417989754|ref|ZP_12630255.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|417999249|ref|ZP_12639460.1| GTP-binding protein [Lactobacillus casei T71499]
gi|418002193|ref|ZP_12642315.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|418008114|ref|ZP_12647983.1| GTP-binding protein [Lactobacillus casei UW4]
gi|418010953|ref|ZP_12650724.1| GTP-binding protein [Lactobacillus casei Lc-10]
gi|418015193|ref|ZP_12654770.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|239525873|gb|EEQ64874.1| GTPase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|410524309|gb|EKP99221.1| GTP-binding protein [Lactobacillus casei 12A]
gi|410527799|gb|EKQ02661.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|410537499|gb|EKQ12073.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|410539525|gb|EKQ14053.1| GTP-binding protein [Lactobacillus casei T71499]
gi|410544621|gb|EKQ18942.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|410547342|gb|EKQ21577.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410552017|gb|EKQ26056.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|410553532|gb|EKQ27535.1| GTP-binding protein [Lactobacillus casei Lc-10]
Length = 300
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 161/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|415885555|ref|ZP_11547483.1| GTP-binding protein Era [Bacillus methanolicus MGA3]
gi|387591224|gb|EIJ83543.1| GTP-binding protein Era [Bacillus methanolicus MGA3]
Length = 306
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 158/253 (62%), Gaps = 6/253 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG
Sbjct: 10 YKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVLTLHDSQLIFIDTPG 69
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK +A D I+ +V+A + R +E + E + K P+ LV
Sbjct: 70 IHKPK-HKLGDFMMKVAINALKEVDLILFMVNAEEGFGRGEEFIIEKF--QQIKTPVFLV 126
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D I P E+ +E Y++ E+IP+SA G+ VE + + I LP GP YYP D
Sbjct: 127 INKIDKIHPDELLPLIESYKEKYSFSEIIPISALQGNNVEALLEQIKKYLPEGPQYYPAD 186
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNS 350
V++HPERF V E+IREK R EVP++ V V+ R D I V ++VE++S
Sbjct: 187 QVTDHPERFIVSELIREKALHLTREEVPHSLAV-VIDKMERREESDVIHVMATVIVERDS 245
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 246 QKGIIIGKQGKML 258
>gi|357039525|ref|ZP_09101318.1| GTP-binding protein Era-like-protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355357888|gb|EHG05658.1| GTP-binding protein Era-like-protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 312
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 149/255 (58%), Gaps = 18/255 (7%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG+V ++G+ NVGKSTL N M+GQKL+I+++KPQTTRH+I + +G +YQ + DT
Sbjct: 18 PGFKSGFVTIVGRTNVGKSTLLNNMLGQKLTIMSDKPQTTRHKIQCVLTGADYQAVFIDT 77
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------- 223
PGI + K H L M+ +A D +++LV+A G GDH
Sbjct: 78 PGIHKPK-HKLGEHMVGTALNALREVDVVLLLVEAAMP----------GPGDHYMLEQLK 126
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K P+LL +NK DLIKP E+ + ++K + +++PVSA G V+ +R I+ LP
Sbjct: 127 KVTGPVLLAINKIDLIKPDELMPIIAAFQKTGNFADIVPVSALTGENVQHLRQVIINYLP 186
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YYP D+V + PERF + E+IREK+ EVP++ V V + R ++
Sbjct: 187 EGPQYYPDDMVVDRPERFIMAELIREKVLHLTSQEVPHSVAVVVDEVEQRSQELVAVRAV 246
Query: 344 IVVEKNSQKIILIGK 358
I E+ SQK ILIGK
Sbjct: 247 IYTERESQKGILIGK 261
>gi|418605497|ref|ZP_13168821.1| GTP-binding protein Era [Staphylococcus epidermidis VCU041]
gi|418616397|ref|ZP_13179322.1| GTP-binding protein Era [Staphylococcus epidermidis VCU120]
gi|420183229|ref|ZP_14689362.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM049]
gi|420194865|ref|ZP_14700662.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM021]
gi|420214027|ref|ZP_14719307.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05005]
gi|420216485|ref|ZP_14721693.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05001]
gi|420220513|ref|ZP_14725472.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04008]
gi|420232082|ref|ZP_14736724.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051668]
gi|420234729|ref|ZP_14739289.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051475]
gi|374402386|gb|EHQ73416.1| GTP-binding protein Era [Staphylococcus epidermidis VCU041]
gi|374821223|gb|EHR85290.1| GTP-binding protein Era [Staphylococcus epidermidis VCU120]
gi|394249692|gb|EJD94905.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM049]
gi|394263925|gb|EJE08646.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM021]
gi|394283949|gb|EJE28110.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05005]
gi|394285866|gb|EJE29932.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04008]
gi|394291851|gb|EJE35634.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05001]
gi|394301804|gb|EJE45258.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051668]
gi|394303972|gb|EJE47382.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051475]
Length = 299
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTMMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|311745512|ref|ZP_07719297.1| GTP-binding protein Era [Algoriphagus sp. PR1]
gi|126578067|gb|EAZ82287.1| GTP-binding protein Era [Algoriphagus sp. PR1]
Length = 297
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 157/249 (63%), Gaps = 5/249 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ H++G+V ++GKPNVGKSTL N ++G++LSI+++K QTTRHRILG+ + YQ++
Sbjct: 2 TQTKHQAGFVNIIGKPNVGKSTLMNILVGERLSIISSKAQTTRHRILGLTNTENYQIVFS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+++ + + L MM V + +AD ++ + D + E I EI+++ ++ +P
Sbjct: 62 DTPGMLKPQ-YELHKNMMSFVNISLEDADVVLFVTDLYETDEEIVEIIDK---INQSGIP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
I+L +NK DL K G++ K E++ D VIP+SA + + IL +LP P +
Sbjct: 118 IILAINKIDLAKEGQLEKVTEYWTSRIKADVVIPISAGEEFNTDKVLQEILERLPEHPPF 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y K+ +++ ERFF EIIREKIF Y+ EVPY+ +VNV + + I+ I VE+
Sbjct: 178 YDKEELTDRSERFFASEIIREKIFNNYKKEVPYSTEVNVEDFHVKNKIIR-IRATIYVER 236
Query: 349 NSQKIILIG 357
+SQK I+IG
Sbjct: 237 DSQKGIIIG 245
>gi|381187492|ref|ZP_09895056.1| GTP-binding protein Era [Flavobacterium frigoris PS1]
gi|379650620|gb|EIA09191.1| GTP-binding protein Era [Flavobacterium frigoris PS1]
Length = 293
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 158/247 (63%), Gaps = 7/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++QMIL DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + + + MM V+SA +AD ++ +V+ + + + + + K+P+LL
Sbjct: 62 GII-KPAYEMQASMMNFVKSAFEDADILIYMVEIGEQDLKDEAFFNKII---HAKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+LNK D ++ +++ W EK + E+ P+SA V ++ I++ LP PAYYP
Sbjct: 118 LLNKIDTSNQDKLEEQVAFWAEKVPNA-EIFPISALQNFNVPEVFQRIISLLPESPAYYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV E IREKI + Y E+PYA ++ + + I+ I+VE+ +
Sbjct: 177 KDQLTDKPERFFVNETIREKILLNYSKEIPYAVEIVTEEFFEDESIIR-IRSLIMVERET 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|417986872|ref|ZP_12627437.1| GTP-binding protein [Lactobacillus casei 32G]
gi|410524606|gb|EKP99514.1| GTP-binding protein [Lactobacillus casei 32G]
Length = 300
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 161/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIENYQHDYAFAQVFPISATMGNNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|338211233|ref|YP_004655286.1| GTP-binding protein Era [Runella slithyformis DSM 19594]
gi|336305052|gb|AEI48154.1| GTP-binding protein Era-like-protein [Runella slithyformis DSM
19594]
Length = 327
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 170/255 (66%), Gaps = 14/255 (5%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP----EYQ 164
++P+H++G+V+++GKPNVGKSTL N ++G+K+SI+T+K QTTRHRI+GI +G ++Q
Sbjct: 30 NNPDHRAGFVSIVGKPNVGKSTLMNVLVGEKMSIITSKAQTTRHRIMGILNGVHEGVDFQ 89
Query: 165 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 224
++ DTPGII+ + + +SMM + V+ + +AD ++ + D + + +E+LE K
Sbjct: 90 LVYSDTPGIIKPQYKLHESMM-EFVQGSLEDADVVLFVTDIFEKHDD-EEVLERLA---K 144
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
+ ++L++NK DL +I +K+ ++++ +IP+SA G+ + I+ LP+
Sbjct: 145 TEGAVILIINKTDLATEEQINEKIAFWKEKLFTAAIIPISALKQEGINTLFTAIMECLPV 204
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQV 342
P Y+PKD +++ PERFF EIIREK+F+ Y+ E+PY+ ++ V +K + KD I+
Sbjct: 205 HPPYFPKDELTDKPERFFAAEIIREKVFLNYKKEIPYSTEIIVEEFKDK---KDILVIRA 261
Query: 343 EIVVEKNSQKIILIG 357
I+VE+ SQK I+IG
Sbjct: 262 VILVERQSQKGIIIG 276
>gi|390954552|ref|YP_006418310.1| GTP-binding protein Era [Aequorivita sublithincola DSM 14238]
gi|390420538|gb|AFL81295.1| GTP-binding protein Era [Aequorivita sublithincola DSM 14238]
Length = 295
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 160/246 (65%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTPG
Sbjct: 4 HKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGDDFQVLLSDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM V+SA +AD ++ LV+ + E DE + + K+P+LL+
Sbjct: 64 II-KPAYQLQESMMDFVKSAFEDADILLYLVELGEK-ELKDEAFFNKITN--SKIPVLLL 119
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D+ +++ L+ W EK + E+ +SA GV ++ + I+ LP PA+YPK
Sbjct: 120 INKIDIGNEELLSEALKLWQEKVPNA-EIFAISALQNFGVPEVFNRIIELLPESPAFYPK 178
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFFV E IREKI + Y+ E+PY+ +++ + T I+ I+VE+ +Q
Sbjct: 179 DQLTDKPERFFVNEAIREKILIHYKKEIPYSVEIDTEEFFEDETIIR-IRSVIMVERETQ 237
Query: 352 KIILIG 357
K I+IG
Sbjct: 238 KGIIIG 243
>gi|227510288|ref|ZP_03940337.1| GTP-binding protein Era [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227524439|ref|ZP_03954488.1| GTP-binding protein Era [Lactobacillus hilgardii ATCC 8290]
gi|227088398|gb|EEI23710.1| GTP-binding protein Era [Lactobacillus hilgardii ATCC 8290]
gi|227189940|gb|EEI70007.1| GTP-binding protein Era [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 300
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 159/255 (62%), Gaps = 6/255 (2%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN++SG+VA++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + E Q++ D
Sbjct: 3 NPNYRSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDEAQVVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-HKDKLP 228
TPGI K + L MM + SA D ++ +V+A + D + + + D HK P
Sbjct: 63 TPGI-HKPQNKLGDFMMDSALSALKEVDAVLFMVNATERRGAGDNFIIDRLKDVHK---P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
I L++NK D I P ++ +E Y+ EV P+SA G+ V ++ ++ +LP GP Y
Sbjct: 119 IYLLINKIDEITPDDVMAIIEQYKNALSFKEVFPISALQGNNVPELLTSLIKELPNGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YPKD V++HPERF + E+IREK+ R E+P++ V + S K + IQ I+VE+
Sbjct: 179 YPKDQVTDHPERFVISELIREKVLQMTRQEIPHSTAVYIESIKKQDEVL-HIQATIIVER 237
Query: 349 NSQKIILIGKVSPFL 363
+ QK I+IGK L
Sbjct: 238 DGQKGIVIGKGGSML 252
>gi|408372018|ref|ZP_11169770.1| GTPase Era [Galbibacter sp. ck-I2-15]
gi|407742575|gb|EKF54170.1| GTPase Era [Galbibacter sp. ck-I2-15]
Length = 295
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 161/248 (64%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +IG+KLSI+T+K QTTRHRI GI +G ++Q++ DTPG
Sbjct: 4 HKAGFVNIVGNPNVGKSTLMNALIGEKLSIITSKAQTTRHRIFGIVNGDDFQVVFSDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L S MM V+SA +AD ++ +V+ + + DE + + K+P+LL+
Sbjct: 64 II-KPAYELQSSMMDFVKSAFEDADVLIYMVEIGEKDLK-DEAFFAKITN--SKVPVLLL 119
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D+ + ++++ W +K + E+ P+SA V+ + + IL LP PA+YPK
Sbjct: 120 LNKIDVSSQEVLEQQVQLWKDKVPNA-EIYPISALQNFNVDTVFNRILELLPESPAFYPK 178
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFFV E IREKI + Y E+PYA +V + ++ I++ I+VE++
Sbjct: 179 DQITDKPERFFVNETIREKILINYSKEIPYAVEVETEEF---LEDENIIRIRSVIMVERD 235
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 236 TQKGIIIG 243
>gi|222151466|ref|YP_002560622.1| GTP-binding protein Era [Macrococcus caseolyticus JCSC5402]
gi|222120591|dbj|BAH17926.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 300
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 154/250 (61%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKST N+++GQK++I+++K QTTR+++ G+ + + Q+I DTPGI
Sbjct: 6 KSGFVAIIGRPNVGKSTFMNKVLGQKVAIMSDKAQTTRNKVQGVLTTEQSQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K HML MMK ++ D I+ +V+ ++ R DE + E + + ++ PI LVL
Sbjct: 66 HKPK-HMLGDYMMKVAKNTLREVDAILFMVNVEESIGRGDEFIIELLKN--NRTPIFLVL 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P E+ K++E Y+ E++P+SA G+ V+ + I +P GP YYPKD
Sbjct: 123 NKIDKIHPDELIKEIEKYKDLLPFAEIVPISALQGNNVDHLVKVIERYMPEGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+S+HPE F V E+IREK E+P+A V V + I+ I +E+ SQK
Sbjct: 183 ISDHPEEFIVAELIREKALHLTSQEIPHAIGVQVEKMVKESEERVHIEATIYIERESQKG 242
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 243 IIIGKQGSML 252
>gi|393780154|ref|ZP_10368376.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392608908|gb|EIW91738.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 293
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 159/245 (64%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ +V+ + E DE + + ++ ++P+LL+
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-ELKDEAFFKRI--NQLEVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +++ ++++ E+ P+SA E + + I+ LP PA++PKD
Sbjct: 118 INKVDTSDQNVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ SQK
Sbjct: 178 QLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERESQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|403668256|ref|ZP_10933531.1| GTP-binding protein Era [Kurthia sp. JC8E]
Length = 300
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI DTPGI
Sbjct: 5 KSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTMDDSQMIFIDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M K ++A D I+ +V+A + DE + E + K P+ L++
Sbjct: 65 HKPK-HKLGEFMSKVSKNALREVDAIMFMVNAQQKLGAGDEYVIEML--KGSKTPVFLII 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P EI K ++ Y++ D E++P+SA G+ V+++ + + LP GP YYP D
Sbjct: 122 NKIDTIHPEEILKIVDQYKEKYDFAEIVPISALQGNNVDNLLNTLKKYLPEGPQYYPADQ 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
V++HPERF + E+IREK R+EVP++ V + + T K + I+VE++SQK
Sbjct: 182 VTDHPERFIISELIREKALHLTRDEVPHSIAVEIEKIRRDEETDKVRVMASIIVERDSQK 241
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 242 GIVIGKRGAML 252
>gi|340621136|ref|YP_004739587.1| GTP-binding protein era-like protein [Capnocytophaga canimorsus
Cc5]
gi|339901401|gb|AEK22480.1| GTP-binding protein era-like protein [Capnocytophaga canimorsus
Cc5]
Length = 293
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 158/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQIVFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ +V+ + + D + +K +P+LL+
Sbjct: 63 II-KPAYELQNSMMDFVKSAFEDADILIYMVEVGEKQLKDDLFFAK---INKMNIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +++ ++++ EV P+SA G ++ + I+ LP PA++PKD
Sbjct: 119 INKIDKSSQEVLEEQVAYWKEQVPKAEVFPISALAGFQTNEVFNRIIELLPESPAFFPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV EIIREKI + Y+ E+PYA +V S+ ++ I + I+VE+ +
Sbjct: 179 QLTDKPERFFVNEIIREKILLNYKKEIPYAVEVETESF---VDSEHIIHIRSVIMVERET 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|403237533|ref|ZP_10916119.1| GTPase Era [Bacillus sp. 10403023]
Length = 303
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 159/256 (62%), Gaps = 4/256 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ N KSG+V+++G+PNVGKST N +IGQK++I+++KPQTTR+++ G+ + + Q+I
Sbjct: 3 TNNNFKSGFVSIIGRPNVGKSTFLNHVIGQKIAIMSDKPQTTRNKVQGVLTEEDSQIIFI 62
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + R DE + E + + + P
Sbjct: 63 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGRGDEFIIERLKNIQT--P 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P ++ + +E Y+ E++P+SA G + + I T LP GP Y
Sbjct: 120 VFLVVNKIDQIHPDKLLELIEKYKGLYPFKEIVPISALQGTNTSRLVEQIKTYLPEGPQY 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVE 347
YP D V++HPERF + E+IREK+ R E+P++ V + S + R ++ I+VE
Sbjct: 180 YPADQVTDHPERFIITELIREKVLHLTREEIPHSIAVVMDSLERREGGNTVYVGATIIVE 239
Query: 348 KNSQKIILIGKVSPFL 363
+NSQK I+IGK L
Sbjct: 240 RNSQKGIIIGKQGSML 255
>gi|452975095|gb|EME74914.1| GTPase Era [Bacillus sonorensis L12]
Length = 301
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 154/250 (61%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I DTPGI
Sbjct: 7 KSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDTSQTIFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L MMK ++ D I+ +++A + + DE + E + P+ L++
Sbjct: 67 HKPK-HKLGDFMMKVAQNTLKEVDIILFMINAAEGYGKGDEFIIERLKGLTT--PVFLIV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P E+ ++ Y E+IP+SA G+ ++ + + I LP GP +YP D
Sbjct: 124 NKIDQIHPDELLLLIDEYRARYPFKEIIPISALEGNNIDTLLNQIEHYLPEGPQFYPSDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPERF + E+IREK+ R E+P++ V++ S K R ++ IVVE++SQK
Sbjct: 184 VTDHPERFIISELIREKVLHLTREEIPHSIAVSIDSIKERENGSVYVSATIVVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IVIGKRGSLL 253
>gi|199599319|ref|ZP_03212717.1| GTPase [Lactobacillus rhamnosus HN001]
gi|258508545|ref|YP_003171296.1| GTP-binding protein era [Lactobacillus rhamnosus GG]
gi|385828207|ref|YP_005865979.1| GTP-binding protein Era [Lactobacillus rhamnosus GG]
gi|418070731|ref|ZP_12708006.1| GTPase Era [Lactobacillus rhamnosus R0011]
gi|199589758|gb|EDY97866.1| GTPase [Lactobacillus rhamnosus HN001]
gi|257148472|emb|CAR87445.1| GTP-binding protein era [Lactobacillus rhamnosus GG]
gi|259649852|dbj|BAI42014.1| GTP-binding protein Era [Lactobacillus rhamnosus GG]
gi|357540151|gb|EHJ24168.1| GTPase Era [Lactobacillus rhamnosus R0011]
Length = 300
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 159/258 (61%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KD 225
I + K + LD M K S D I+ +V A DE ++G GD +
Sbjct: 64 IHKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYILRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L+LNK DL+KP ++ +E Y+ +V P+SA G+ V+++ + + LP G
Sbjct: 114 KKPVYLILNKIDLVKPDDLLPLIESYQHDYHFAQVFPISATMGNNVDELLNSLTATLPEG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|420150287|ref|ZP_14657447.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394752346|gb|EJF36048.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 293
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 156/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q+I DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVIFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PIL 230
II K + L + MM V+SA +AD ++ +V+ + E+ +E ++L P+L
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + +++ ++++ E+ P+SA E + + I+ LP PA++P
Sbjct: 116 LLINKVDTSDQSVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFP 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD ++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ S
Sbjct: 176 KDQLTNKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERES 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|381210387|ref|ZP_09917458.1| GTP-binding protein [Lentibacillus sp. Grbi]
Length = 300
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 157/252 (62%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG++A++G+PNVGKST NQ+IGQK++I+++K QTTR+RI G+ + + Q++ DTP
Sbjct: 4 NFKSGFIAIIGRPNVGKSTFMNQIIGQKIAIMSDKAQTTRNRIQGVLTSDDAQLVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+K D ++ +++A + + D+ + + + K K P+ L
Sbjct: 64 GIHKPK-HRLGDFMVKVAEDTLNEVDAVLFMINAKEGYGKGDQYILDRL--QKVKRPVFL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DL+ P + ++ Y+ + +E+IP+SA G+ + + + +P GP YYP+
Sbjct: 121 VINKIDLVHPDNLLPLIDSYKDKYNFEEIIPISALQGNNLTHLLAELKKHIPEGPQYYPE 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V++HPERF V E+IREK+ R EVP++ V + + + R + FIQ ++ E+ +Q
Sbjct: 181 DHVTDHPERFIVTELIREKVLELTREEVPHSIAVVLENMEKRASNAVFIQATVITERQTQ 240
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 241 KGIVIGKQGAML 252
>gi|443242418|ref|YP_007375643.1| GTP-binding protein [Nonlabens dokdonensis DSW-6]
gi|442799817|gb|AGC75622.1| GTP-binding protein [Nonlabens dokdonensis DSW-6]
Length = 296
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 164/248 (66%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q ++ DTPG
Sbjct: 3 HKAGFVNIVGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQAVISDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM+ V++A +ADCI+ +V+ + E +E E+ + ++P+ ++
Sbjct: 63 II-KPAYKLQESMMEFVKNAFEDADCILYMVELGEK-ELKNEAFEKRLT--YAEVPVFVL 118
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D +P ++ + + W E+ + E+ +SA GV + + I+ LP+ PA+YPK
Sbjct: 119 INKIDKGQPNQLEEAVAHWKERLPNA-EIFAISALENFGVPQVLERIVESLPVSPAFYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFFV E IREKI + Y+ E+PY+ +++ + +D I++ I+VE+
Sbjct: 178 DALTDKPERFFVNESIREKILIHYKKEIPYSVEIDTEEF---FEDEDIIRIRSVIMVERE 234
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 235 TQKGIIIG 242
>gi|425737403|ref|ZP_18855676.1| GTPase Era [Staphylococcus massiliensis S46]
gi|425482751|gb|EKU49907.1| GTPase Era [Staphylococcus massiliensis S46]
Length = 298
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 3 HKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTEADSQIIFLDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+ + R D+ + + + + K P+ LV
Sbjct: 63 IHKPK-HKLGDYMMKVAKNTLGEIDAIMFMVNVDEEIGRGDQYIMDMLKNVK--TPVFLV 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P ++ ++E Y+++ D EVIP+SA G V+ + + LP GP YYP D
Sbjct: 120 LNKIDLVHPDQLMPRIEQYQEYMDFTEVIPISALEGLNVDHFISVLKSYLPEGPKYYPDD 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V E+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 180 QISDHPEQFVVSELIREKILELTSEEIPHAIGVNVDRMVKESEDRVRIEATIFVERDSQK 239
Query: 353 IILIGK 358
I+IGK
Sbjct: 240 GIVIGK 245
>gi|300860627|ref|ZP_07106714.1| GTP-binding protein Era [Enterococcus faecalis TUSoD Ef11]
gi|300849666|gb|EFK77416.1| GTP-binding protein Era [Enterococcus faecalis TUSoD Ef11]
Length = 300
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 154/239 (64%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ +A D + +V A + + D + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDGFIIERLKNNNS--PVYLI 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++HPE F V E+IREK+ + R+E+P++ V V S K K +Q I+VE++SQ
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAVVVDSMKRDENDKVHVQATIIVERDSQ 240
>gi|404485334|ref|ZP_11020532.1| GTP-binding protein Era [Barnesiella intestinihominis YIT 11860]
gi|404338769|gb|EJZ65214.1| GTP-binding protein Era [Barnesiella intestinihominis YIT 11860]
Length = 294
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 160/247 (64%), Gaps = 6/247 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTEDMQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + +SA ++AD ++ + D +AP + L++ ++ +P+L+V
Sbjct: 62 VLVPNYKLQESMLNFS-QSALLDADILLYVTDVVEAPAKNQSFLDKVA---RETVPVLVV 117
Query: 233 LNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL+K ++ K +E +++ E+IPVSA+Y ++ + I LP P ++ K
Sbjct: 118 INKIDLLKEQSDLEKLVEEWKQLLPNAEIIPVSAQYKFNLDYLLKRIQELLPPSPPFFEK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P RFFV EIIREKI Y E+PYAC+V V + D + V I VE++SQ
Sbjct: 178 DALTDKPARFFVTEIIREKILQTYDKEIPYACEVAVEQFHEEENHIDIMAV-IYVERDSQ 236
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 237 KGIVIGK 243
>gi|410460487|ref|ZP_11314165.1| GTPase Era [Bacillus azotoformans LMG 9581]
gi|409927102|gb|EKN64248.1| GTPase Era [Bacillus azotoformans LMG 9581]
Length = 302
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 160/256 (62%), Gaps = 4/256 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S+ N+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + Q+I
Sbjct: 2 SNENYKSGFVSIIGRPNVGKSTFLNKVIGQKIAIMSDKPQTTRNKIQGVYTTDHSQIIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + D+ + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLNEVDLILFMINAVEGFGKGDQFIIERL--KQTNQP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P E+ ++ Y++ E+IP+SA G+ V + + I +P GP Y
Sbjct: 119 VFLVINKIDQVHPDELITLIDQYKEMYPFKEIIPISALEGNNVTTLLEQIEKYMPNGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVE 347
YP D V++HPERF + E+IREK+ R E+P++ V + S + R +I I+VE
Sbjct: 179 YPADQVTDHPERFIITELIREKVLHLTREEIPHSIAVVMDSLERRGDGNTVYIAATIIVE 238
Query: 348 KNSQKIILIGKVSPFL 363
++SQK I+IGK L
Sbjct: 239 RDSQKGIVIGKQGKML 254
>gi|89100470|ref|ZP_01173332.1| Era [Bacillus sp. NRRL B-14911]
gi|89084813|gb|EAR63952.1| Era [Bacillus sp. NRRL B-14911]
Length = 309
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 161/263 (61%), Gaps = 6/263 (2%)
Query: 103 EEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPE 162
+E++ HKSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + +
Sbjct: 3 KEWNSNREQTHKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTND 62
Query: 163 YQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD 222
Q I DTPGI + K H L MMK ++ D I+ +V+A + R +E + E
Sbjct: 63 AQFIFIDTPGIHKPK-HKLGDFMMKIAQNTLKEVDLILFMVNAEEGFGRGEEFIIEKF-- 119
Query: 223 HKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 282
K PI LV+NK D I P ++ +E Y++ E+IP+SA G+ V+ + + I +
Sbjct: 120 QNVKTPIFLVINKIDQIHPDKLFSIIESYKEKYGFKEIIPISALEGNNVDTLLEQIKQYI 179
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP +YP D V++HPERF V E+IREK R E+P++ V V+ R KD I V
Sbjct: 180 PEGPQFYPADQVTDHPERFIVSELIREKALHLTREEIPHSLAV-VIDKMERREDKDVINV 238
Query: 343 --EIVVEKNSQKIILIGKVSPFL 363
++VE++SQK I+IGK L
Sbjct: 239 MATVIVERDSQKGIVIGKQGAML 261
>gi|336114410|ref|YP_004569177.1| GTP-binding protein Era [Bacillus coagulans 2-6]
gi|335367840|gb|AEH53791.1| GTP-binding protein Era [Bacillus coagulans 2-6]
Length = 302
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 157/256 (61%), Gaps = 6/256 (2%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
P +KSG+++++G+PNVGKST NQ++GQK++I+++KPQTTR++I G+ + + QMI D
Sbjct: 3 QPTYKSGFISIIGRPNVGKSTFINQVVGQKIAIMSDKPQTTRNKIQGVYTADDAQMIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI + K H L M+K+ D I+ +V+A + R DE + + + + P+
Sbjct: 63 TPGIHKPK-HKLGDFMVKSATDTLKEVDLILFMVNAEEKRGRGDEYIIDLL--KHVRTPV 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK DL+ P ++ +E Y+ EV+P+SA G+ V + I LP GP YY
Sbjct: 120 FLVINKIDLVHPDDLLAFIEQYKDLYPFREVVPISALGGNNVGRLLGAIKEYLPEGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVE 347
P D V++HPERF + E+IREK R EVP++ V V+ + KD I+V IVVE
Sbjct: 180 PADQVTDHPERFIISELIREKALQLTREEVPHSIAV-VIEKMEQAENKDVIRVMATIVVE 238
Query: 348 KNSQKIILIGKVSPFL 363
+ SQK I+IG+ L
Sbjct: 239 RPSQKGIIIGRQGSML 254
>gi|399032719|ref|ZP_10731998.1| GTP-binding protein Era [Flavobacterium sp. CF136]
gi|398068874|gb|EJL60263.1| GTP-binding protein Era [Flavobacterium sp. CF136]
Length = 293
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 158/248 (63%), Gaps = 9/248 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q+IL DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQLILSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ M +S MM V+SA +AD +V +V+ + + + + + K+P+LL
Sbjct: 62 GIIKPAYEMQES-MMNFVKSAFEDADILVYMVEIGEQDLKDEAFFNKII---HAKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK D ++ +++ ++ E+ P+SA V ++ I++ LP PAYYPK
Sbjct: 118 LLNKIDNSNQEQLEEQVAFWTAKVPNAEIFPISALQNFNVPEVFSRIISLLPESPAYYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFFV E IREKI + Y E+PYA ++ + ++ I++ I+VE+
Sbjct: 178 DQLTDKPERFFVNETIREKILLNYSKEIPYAVEIVTEEFFED---ENIIRIRSIIMVERE 234
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 235 TQKGIIIG 242
>gi|300770940|ref|ZP_07080817.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33861]
gi|300762213|gb|EFK59032.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33861]
Length = 292
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 159/254 (62%), Gaps = 10/254 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V+++GKPN GKSTL N ++G+K+SI+T K QTTRHRI+GI + +Q++ DTP
Sbjct: 2 SHKAGFVSIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRIMGIVNDENHQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE--ILEEGVGDHKDKLPI 229
G+I K + L MM V+ + I+AD I+ + D E+ DE ++E+ K P+
Sbjct: 62 GVI-KPNYSLQESMMNFVQGSLIDADIILFVTDIN---EKYDENDVIEKL---RKTSSPV 114
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+++NK D ++ K+E++++ + D + +SA + H V I D+I KLP YY
Sbjct: 115 AVLINKIDKSTEEDVKAKIEFWKEKLNPDTIFAISALHQHNVVAIMDYIKEKLPEHAPYY 174
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
KD +++ RFFV E+IREK+F Y E+PY+ +V + SYK P I EI+VE++
Sbjct: 175 EKDELTDKSMRFFVSEMIREKVFKLYDKEIPYSTEVIITSYKEEPKITR-IAAEIIVERD 233
Query: 350 SQKIILIGKVSPFL 363
SQK ILIGK +
Sbjct: 234 SQKNILIGKAGEMI 247
>gi|152976731|ref|YP_001376248.1| GTP-binding protein Era [Bacillus cytotoxicus NVH 391-98]
gi|152025483|gb|ABS23253.1| GTP-binding protein Era [Bacillus cytotoxicus NVH 391-98]
Length = 301
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 161/255 (63%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ +KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q+I
Sbjct: 2 NNKGYKSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKVQGVYTENDAQVIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D ++ +V+A + R +E + E + + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMVKMAQTTLKEVDIVLFMVNAAEGFGRGEEYIIEKLKETRQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ + ++ Y + E++P+SA G+ VE + I LP GP Y
Sbjct: 119 VFLVINKIDQVHPEKLLELIDQYRNLYEFAEIVPISALEGNNVEALIGAIKKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP++ V++HPERF + E+IREK+ R EVP++ V + + + R ++ I+VE+
Sbjct: 179 YPENQVTDHPERFIIAELIREKVLHLTREEVPHSVAVAIDAIQKREGGAVYVNATIIVER 238
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 239 PSQKGIIIGKQGKML 253
>gi|392531590|ref|ZP_10278727.1| GTP-binding protein Era [Carnobacterium maltaromaticum ATCC 35586]
gi|414083900|ref|YP_006992608.1| GTP-binding protein Era [Carnobacterium maltaromaticum LMA28]
gi|412997484|emb|CCO11293.1| GTP-binding protein Era [Carnobacterium maltaromaticum LMA28]
Length = 299
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 153/239 (64%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE QMI DTPG
Sbjct: 4 HKSGFVAIIGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGIYTTPEAQMIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+ + S D I+++V+A + D + E + +K PI LV
Sbjct: 64 IHKPK-HRLGDFMVDSALSTLREVDVIILMVNAEEKRGPGDNFIIEKL--QGNKTPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ + ++ Y + ++++P+SA G+ VE + + +L LP GP +YP+D
Sbjct: 121 INKIDKVHPEKLLEIIDNYRELLPFEQIVPISATEGNNVETLLNELLRYLPAGPQFYPED 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
V++HPE F V E+IREK+ R E+P++ V V K K +Q I+VE++SQ
Sbjct: 181 QVTDHPEYFIVSELIREKVLELTREEIPHSVAVVVEGMKRNENDKVQVQATIIVERSSQ 239
>gi|229552355|ref|ZP_04441080.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1]
gi|258539726|ref|YP_003174225.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705]
gi|385835375|ref|YP_005873149.1| GTP-binding protein Era [Lactobacillus rhamnosus ATCC 8530]
gi|229314337|gb|EEN80310.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1]
gi|257151402|emb|CAR90374.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705]
gi|355394866|gb|AER64296.1| GTP-binding protein Era [Lactobacillus rhamnosus ATCC 8530]
Length = 300
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 159/258 (61%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KD 225
I + K + LD M K S D I+ +V A DE ++G GD +
Sbjct: 64 IHKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYILRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L+LNK DL+KP ++ +E Y+ +V P+SA G+ V+++ + + LP G
Sbjct: 114 KKPVYLILNKIDLVKPDDLLPLIESYQHDYHFAQVFPISATMGNSVDELLNSLTGTLPEG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|150015731|ref|YP_001307985.1| GTP-binding protein Era [Clostridium beijerinckii NCIMB 8052]
gi|189037260|sp|A6LRP9.1|ERA_CLOB8 RecName: Full=GTPase Era
gi|149902196|gb|ABR33029.1| GTP-binding protein Era [Clostridium beijerinckii NCIMB 8052]
Length = 298
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDKK--CPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK LE Y K E++P+SA G V+ + + + +P GP YYP D+
Sbjct: 120 NKVDESTQDRVAKSLEMYSKEFKFAEIVPISAIKGKNVDVLVELMKKAMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVQEKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEIGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|154686789|ref|YP_001421950.1| GTP-binding protein Era [Bacillus amyloliquefaciens FZB42]
gi|384266139|ref|YP_005421846.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387899162|ref|YP_006329458.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|394992072|ref|ZP_10384865.1| GTPase Era [Bacillus sp. 916]
gi|429505937|ref|YP_007187121.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|154352640|gb|ABS74719.1| Era [Bacillus amyloliquefaciens FZB42]
gi|380499492|emb|CCG50530.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387173272|gb|AFJ62733.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|393807088|gb|EJD68414.1| GTPase Era [Bacillus sp. 916]
gi|429487527|gb|AFZ91451.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 301
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 156/255 (61%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + + DE + E +G + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ VE + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R EVP++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGALL 253
>gi|325954893|ref|YP_004238553.1| GTP-binding protein Era-like-protein [Weeksella virosa DSM 16922]
gi|323437511|gb|ADX67975.1| GTP-binding protein Era-like-protein [Weeksella virosa DSM 16922]
Length = 295
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 161/251 (64%), Gaps = 5/251 (1%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
++ N KSG+V ++G PNVGKSTL N ++ ++L I T+K QTTRHRI GI +G YQ++
Sbjct: 2 GNNENFKSGFVNIIGNPNVGKSTLMNLLMKERLVIATHKAQTTRHRIKGILTGENYQIVF 61
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPG+I+ + L ++MM +V+ + I+AD ++ +V+ + + +EI E+ + +
Sbjct: 62 SDTPGVIDPA-YELQNLMMDSVKESLIDADVLLYVVEVGEKRMKNEEIFEKI---QQTNV 117
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P L++LNK DL+ ++ + ++ + +++P+SAK ++ + + I+ LP GP
Sbjct: 118 PTLILLNKIDLVSQEKLDQAVDHWHALLPNAQILPISAKENFNIDLLINKIIELLPNGPM 177
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP+D +++ ERF V E+IREKI + Y E+PYA +V +K T +I+ +I VE
Sbjct: 178 YYPEDQLTDRSERFIVNEVIREKILLHYEKEIPYAVEVVTERFKEEMTMI-YIEADIYVE 236
Query: 348 KNSQKIILIGK 358
++SQK I+IG+
Sbjct: 237 RDSQKGIIIGR 247
>gi|375090585|ref|ZP_09736899.1| GTP-binding protein Era [Facklamia languida CCUG 37842]
gi|374565346|gb|EHR36617.1| GTP-binding protein Era [Facklamia languida CCUG 37842]
Length = 301
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 154/244 (63%), Gaps = 3/244 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL NQ+IGQK++I+++K QTTR++I G+ + P+ Q++ DTPG+
Sbjct: 7 KSGFVTLIGRPNVGKSTLMNQIIGQKIAIMSDKAQTTRNKIQGVYTRPDAQIVFMDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K SA D ++VLV+A + D + + V D K +P+ LV+
Sbjct: 67 HKPK-HALGDFMVKTAYSAIQGVDAVLVLVNAAEKMGPGDRFVLDRVRDLK--IPVCLVV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI ++ ++ Y + DEV P+SA G V+ + + ++ +P GP YYP D
Sbjct: 124 NKIDLIDKTQLMPIIDQYTQEYPFDEVFPISALTGESVDRLLERLVELMPQGPQYYPADQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V +HPE F V E+IRE++ + R EVP++ V+V S + + + I+VE+ SQK
Sbjct: 184 VVDHPEYFLVSELIREQVLFRTREEVPHSVAVSVQSMQKNEEDEVEVLATIIVERKSQKG 243
Query: 354 ILIG 357
ILIG
Sbjct: 244 ILIG 247
>gi|384160176|ref|YP_005542249.1| GTPase Era [Bacillus amyloliquefaciens TA208]
gi|384165106|ref|YP_005546485.1| GTP-binding protein [Bacillus amyloliquefaciens LL3]
gi|384169246|ref|YP_005550624.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328554264|gb|AEB24756.1| GTPase Era [Bacillus amyloliquefaciens TA208]
gi|328912661|gb|AEB64257.1| GTP-binding protein [Bacillus amyloliquefaciens LL3]
gi|341828525|gb|AEK89776.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
Length = 301
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 156/255 (61%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + + DE + E +G + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ VE + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R EVP++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSIHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGALL 253
>gi|308174317|ref|YP_003921022.1| GTP-binding protein [Bacillus amyloliquefaciens DSM 7]
gi|307607181|emb|CBI43552.1| GTP-binding protein [Bacillus amyloliquefaciens DSM 7]
Length = 301
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 156/255 (61%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + + DE + E +G + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ VE + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R EVP++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSIHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGALL 253
>gi|255533658|ref|YP_003094030.1| GTP-binding protein Era [Pedobacter heparinus DSM 2366]
gi|255346642|gb|ACU05968.1| GTP-binding protein Era [Pedobacter heparinus DSM 2366]
Length = 295
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 163/251 (64%), Gaps = 12/251 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V+++GKPNVGKSTL N ++G+KLSI+T K QTTRHRILGI + YQ++ DTP
Sbjct: 2 SHKAGFVSIIGKPNVGKSTLMNALVGEKLSIITPKAQTTRHRILGIVNEESYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K ++ L MM +V+ A +AD I+ + D + + +++LE+ ++P+++
Sbjct: 62 GII-KPLYGLQDSMMNSVKGALTDADLILFVTDINEQHDE-NDVLEKITN---TEIPLVV 116
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK D ++ +K+ ++++ + + +SA + + +E I +L LP +Y K
Sbjct: 117 LLNKIDNATQEQVDEKVAYWQEKLNPKHIFAISALHQYNLEGIMSMVLDYLPEHAPFYDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-----KTRPTAKDFIQVEIVV 346
+ +++ +RFFV EIIREKIF Y+ E+PY+ +V V ++ K+ P + I EIVV
Sbjct: 177 EDLTDRSQRFFVSEIIREKIFFNYKKEIPYSTEVIVTAFKEEQSKSGPMVR--ITAEIVV 234
Query: 347 EKNSQKIILIG 357
E++SQK ILIG
Sbjct: 235 ERDSQKNILIG 245
>gi|304403961|ref|ZP_07385623.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9]
gi|304346939|gb|EFM12771.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9]
Length = 306
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 154/249 (61%), Gaps = 2/249 (0%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 14 SGFVAIVGRPNVGKSTLMNHIIGQKIAIMSDKPQTTRNKIHGVYTKDDKQIVFLDTPGI- 72
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L + M+K+ +A + + L+D + D + E + + K+ P+ LV+N
Sbjct: 73 HKPQSKLGNFMVKSAVNALDEVEAALFLIDVSEGIGGGDRFIIEQLKNVKNT-PVFLVMN 131
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D +KP E+ K + Y+ D E+IP+SA G+ VE + + + LP GP YYP D +
Sbjct: 132 KIDKVKPEELLKIITQYKDLYDFAEIIPISALQGNNVETLLEQLGRYLPEGPQYYPADQI 191
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
++HPE+F E+IREKI Q R E+P++ V + + + +I I VE++SQK I
Sbjct: 192 TDHPEQFVCAELIREKILHQTREEIPHSIAVTIEDMRVQENGVVYIGAVIFVERDSQKGI 251
Query: 355 LIGKVSPFL 363
+IGK L
Sbjct: 252 IIGKQGALL 260
>gi|182418397|ref|ZP_02949691.1| GTP-binding protein Era [Clostridium butyricum 5521]
gi|237666582|ref|ZP_04526567.1| GTP-binding protein Era [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377779|gb|EDT75323.1| GTP-binding protein Era [Clostridium butyricum 5521]
gi|237657781|gb|EEP55336.1| GTP-binding protein Era [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 296
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 150/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G ++QM+ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDFQMVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + C+ + D + E + K P+ VL
Sbjct: 63 HKPK-HKLGEFMVNSAKESTKDVDLVLFLTNPCEEIGKGDRFILETLKGKK--CPVFFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK LE + K + E++P+SA G V+ + D + +P GP YYP D+
Sbjct: 120 NKVDENTQDRVAKTLEMFSKEFEFAEIVPISAIKGKNVDALLDLMKKSMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ E+F + EI+REK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVQEKFVISEIVREKALRTLRDEVPHGIAVDILQMKQNERGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|451948992|ref|YP_007469587.1| GTP-binding protein Era [Desulfocapsa sulfexigens DSM 10523]
gi|451908340|gb|AGF79934.1| GTP-binding protein Era [Desulfocapsa sulfexigens DSM 10523]
Length = 308
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 163/262 (62%), Gaps = 16/262 (6%)
Query: 106 DYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 165
D+ S P +SG VA++G PN GKSTL N ++GQK+SIV++KPQTTR+RILG+ + +YQ+
Sbjct: 6 DFLSEP-IRSGMVAIVGPPNAGKSTLMNYLLGQKISIVSHKPQTTRNRILGVVNDDKYQI 64
Query: 166 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD-ACKAPERID-----EILE-- 217
+L DTPG+ K L+ M++ + D IV ++D + PE+++ E++E
Sbjct: 65 VLLDTPGL-HKARQPLNREMVRIAMESLNEVDVIVYMIDVSLPLPEKVEQEKNKEMMEQM 123
Query: 218 EGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDW 277
EGV P++LVLNK DL++ + ++ Y + V+P+SA G G E + +
Sbjct: 124 EGVAA-----PVILVLNKVDLLEKERLLPMMKRYSELFPFHGVLPLSALTGEGTEVVVEE 178
Query: 278 ILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK 337
+L LPLGP Y+P+D+ ++ ERF EI+REK+F+ E+PY+ V + S++ T K
Sbjct: 179 LLKLLPLGPRYFPEDVPTDASERFLAAEIVREKVFILTGQEIPYSTAVTIESFQDDETKK 238
Query: 338 -DFIQVEIVVEKNSQKIILIGK 358
I IV+E+NSQK I+IGK
Sbjct: 239 MTTIHATIVLERNSQKGIVIGK 260
>gi|402300044|ref|ZP_10819597.1| Era/ThdF family GTP-binding protein [Bacillus alcalophilus ATCC
27647]
gi|401724835|gb|EJS98164.1| Era/ThdF family GTP-binding protein [Bacillus alcalophilus ATCC
27647]
Length = 304
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR+++ G+ + E Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLINQVIGQKIAIMSDKPQTTRNKVQGVYTTNEAQIVFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L MMK ++ D ++ +VDA ++ +E + E + + + K LV+
Sbjct: 69 HKPK-HKLGDFMMKVAQNTLREVDLVLYVVDATESFGPGEEFIIERLKETEAK--TFLVI 125
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +E Y D DEV+P+SA G+ V + + I+ L GP YYP D
Sbjct: 126 NKIDQVHPEKLLGVIETYRTKYDFDEVVPISALQGNNVTTLLEQIVGYLDEGPQYYPSDQ 185
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQK 352
V++HPERF + E++REK+ R EVP++ V + K R ++ ++ ++VE++SQK
Sbjct: 186 VTDHPERFIIAELVREKVLHMTREEVPHSIAVVIEQIKRREGSETVYVGATVIVERDSQK 245
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 246 GIVIGKQGKVL 256
>gi|373954477|ref|ZP_09614437.1| GTP-binding protein Era-like-protein [Mucilaginibacter paludis DSM
18603]
gi|373891077|gb|EHQ26974.1| GTP-binding protein Era-like-protein [Mucilaginibacter paludis DSM
18603]
Length = 292
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 154/251 (61%), Gaps = 16/251 (6%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+H++G+V+++GKPN GKSTL N ++G+K+SI+T K QTTRHRILGI + +YQ++ DTP
Sbjct: 2 SHRAGFVSIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRILGIVNEEDYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL---- 227
GII K + L MM V + ++AD ++++ D E+ DE D DKL
Sbjct: 62 GII-KPHYALQETMMHQVSGSLVDADMVLLVTDIN---EKYDE------SDVMDKLKGST 111
Query: 228 -PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+++++NK D + +K+ ++E+ V +SA H V+ I + +L LP P
Sbjct: 112 APLVVIINKIDKSDEETVKQKIAYWEETLKPTAVFAISALLNHNVQAIMNLVLDSLPEHP 171
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YY KD +++ +RFF EIIREKIF Y E+PY+ +V + ++ P I EI+V
Sbjct: 172 PYYEKDFLTDRNDRFFASEIIREKIFKIYEKEIPYSTEVIITAFIEDPKIYR-ISAEIIV 230
Query: 347 EKNSQKIILIG 357
E++SQK ILIG
Sbjct: 231 ERDSQKNILIG 241
>gi|329924033|ref|ZP_08279296.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5]
gi|328940872|gb|EGG37180.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5]
Length = 290
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 150/246 (60%), Gaps = 3/246 (1%)
Query: 118 VAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKK 177
+A++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI +++
Sbjct: 1 MAIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTSDSQVVFLDTPGIHKRQ 60
Query: 178 IHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKD 237
+ D M + + G + + LVDA + D + E + K K PI+LV+NK D
Sbjct: 61 SKLGDYMNQTALSTLG-EVEAALFLVDASEGIGGGDRYIAEQL--QKIKTPIILVMNKID 117
Query: 238 LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 297
I+P + +E Y K D E++P+SAK G V + + I LP GP YYP+D V++H
Sbjct: 118 KIEPPALLPLIEQYRKLHDFAEIVPISAKLGSNVNTLLEQIQKYLPPGPQYYPEDQVTDH 177
Query: 298 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 357
PE+F E+IREKI R EVP++ V + + +I I VE++SQK I+IG
Sbjct: 178 PEQFVCAELIREKILHMTREEVPHSIAVTIEDMRVEENGTVYISAVIFVERDSQKGIIIG 237
Query: 358 KVSPFL 363
K L
Sbjct: 238 KQGALL 243
>gi|385265527|ref|ZP_10043614.1| GTP-binding protein Era [Bacillus sp. 5B6]
gi|385150023|gb|EIF13960.1| GTP-binding protein Era [Bacillus sp. 5B6]
Length = 301
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 156/255 (61%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + + DE + E +G + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRTRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R EVP++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGALL 253
>gi|423332768|ref|ZP_17310550.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
gi|337727886|emb|CCC02974.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 301
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 3/242 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D I P ++ K ++ Y+ ++P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPKIVDQYKDTLPFKGIVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 350 SQ 351
Q
Sbjct: 240 GQ 241
>gi|337748357|ref|YP_004642519.1| hypothetical protein KNP414_04117 [Paenibacillus mucilaginosus
KNP414]
gi|336299546|gb|AEI42649.1| Era [Paenibacillus mucilaginosus KNP414]
Length = 303
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + Q++ DTPGI
Sbjct: 11 KSGFVSIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDAAQIVFLDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L MMK + D I+ L+D + D + E + K P++LVL
Sbjct: 71 -HKPTSKLGDYMMKTAQGTLGEVDAILFLIDVVEGLGGGDRFIIEQL--KKVTTPVILVL 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++P ++ + + Y+ E++PVSAK G+ V + + ++ LP GP YYP D
Sbjct: 128 NKIDQVQPEKLLEVITTYKDLYSFAEIVPVSAKNGNNVGTLLEQVIKYLPQGPQYYPADQ 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F E+IREKI R E+P++ V++ K I I VE++SQK
Sbjct: 188 ITDHPEQFVCAELIREKILHMTREEIPHSIAVSIEDMKVEENGVVHISAVIFVERDSQKG 247
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 248 IIIGKKGALL 257
>gi|218781247|ref|YP_002432565.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01]
gi|218762631|gb|ACL05097.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01]
Length = 297
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 157/259 (60%), Gaps = 16/259 (6%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG++ ++G PNVGKSTL NQM+G+K+SI ++KPQTTR+RILG+ + Q+++ DTP
Sbjct: 4 NFKSGFIGMIGAPNVGKSTLLNQMLGEKVSITSSKPQTTRNRILGVVHREKAQLVMLDTP 63
Query: 172 GIIEKKI----HMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
GI K HM+D M + G + D I+ +VDA K + + +G+ K K+
Sbjct: 64 GIHSAKSPLNKHMVDVAM----QCMG-DVDLIMFVVDASKPDPNSERLALKGLA--KQKM 116
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P++LVLNK DLIK + + E D ++PVSA+ G VE++ + +LP GP
Sbjct: 117 PVILVLNKIDLIKKETLLPLIAKLEPLADFKAIVPVSAETGEQVEELIAILEEQLPQGPP 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR---PTAKDFIQVEI 344
++P+D +++ PERF E+IREK+F E+PY+ V + S+ + P K I I
Sbjct: 177 FFPEDSLTDMPERFVAAEMIREKVFRMTSQEIPYSVAVTLDSFTEQEKPPMVK--ISAVI 234
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 235 HVERDSQKGIIIGKQGAML 253
>gi|379723273|ref|YP_005315404.1| hypothetical protein PM3016_5559 [Paenibacillus mucilaginosus 3016]
gi|386725996|ref|YP_006192322.1| GTPase Era [Paenibacillus mucilaginosus K02]
gi|378571945|gb|AFC32255.1| Era [Paenibacillus mucilaginosus 3016]
gi|384093121|gb|AFH64557.1| GTPase Era [Paenibacillus mucilaginosus K02]
Length = 303
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + Q++ DTPGI
Sbjct: 11 KSGFVSIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDAAQIVFLDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L MMK + D I+ L+D + D + E + K P++LVL
Sbjct: 71 -HKPTSKLGDYMMKTAQGTLGEVDAILFLIDVVEGLGGGDRFIIEQL--KKVTTPVILVL 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++P ++ + + Y+ E++PVSAK G+ V + + ++ LP GP YYP D
Sbjct: 128 NKIDQVQPEKLLEVITTYKDLYSFAEIVPVSAKNGNNVGTLLEQVIKYLPQGPQYYPADQ 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F E+IREKI R E+P++ V++ K I I VE++SQK
Sbjct: 188 ITDHPEQFVCAELIREKILHMTREEIPHSIAVSIEDMKVEENGVVHISAVIFVERDSQKG 247
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 248 IIIGKKGALL 257
>gi|52081076|ref|YP_079867.1| GTP-binding protein Era [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644966|ref|ZP_07999199.1| GTP-binding protein era [Bacillus sp. BT1B_CT2]
gi|404489958|ref|YP_006714064.1| GTPase Era [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52004287|gb|AAU24229.1| GTP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348957|gb|AAU41591.1| GTP-binding protein Era [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392775|gb|EFV73569.1| GTP-binding protein era [Bacillus sp. BT1B_CT2]
Length = 301
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 156/258 (60%), Gaps = 9/258 (3%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TQESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE---GVGDHKD 225
DTPGI + K H L MMK + D I+ +++A + + DE + E GV
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAHNTLKEVDLILFMINAEEGYGKGDEFIIERLKGV----- 115
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK D I P E+ ++ Y E++P+SA G+ ++ + I LP G
Sbjct: 116 KTPVFLIVNKIDRIHPDELLVLIDEYRTRYPFQEIVPISALEGNNIDTLLKQIEDYLPEG 175
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P +YP D V++HPERF + E+IREK+ R E+P++ V++ S + R ++ IV
Sbjct: 176 PQFYPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVSIESIQERENGSVYVSATIV 235
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 236 VERDSQKGIVIGKRGSLL 253
>gi|375363061|ref|YP_005131100.1| era-like GTP-binding protein [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421730953|ref|ZP_16170079.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451346265|ref|YP_007444896.1| GTPase Era [Bacillus amyloliquefaciens IT-45]
gi|371569055|emb|CCF05905.1| era-like GTP-binding protein [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407075107|gb|EKE48094.1| GTPase Era [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449850023|gb|AGF27015.1| GTPase Era [Bacillus amyloliquefaciens IT-45]
Length = 301
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 156/255 (61%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + + DE + E +G + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ VE + + LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRARYPFKEIVPISALEGNNVETLLAQVEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R EVP++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEVPHSIAVAIESIKGQENGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGALL 253
>gi|345866473|ref|ZP_08818500.1| GTP-binding protein Era [Bizionia argentinensis JUB59]
gi|344049051|gb|EGV44648.1| GTP-binding protein Era [Bizionia argentinensis JUB59]
Length = 293
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 161/249 (64%), Gaps = 11/249 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI +G ++QM+L DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMVLSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L MM V+SA +AD ++ +V+ + E DE + + K+P+LL
Sbjct: 62 GII-KPAYELQESMMDFVKSAFDDADVLIYMVEIGEK-ELKDEAFFNRITN--SKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+LNK D ++ ++++ W K + E+ +SA G V+++ + I+ LP P +YP
Sbjct: 118 LLNKIDKSDQEQLEEQVQSWAVKVPNA-EIFAISALEGFQVKEVFERIVELLPDSPPFYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEK 348
KD +++ PERFFV E IREKI + Y+ E+PYA +++ + D I++ I+VE+
Sbjct: 177 KDQLTDKPERFFVNETIREKILIHYKKEIPYAVEIDTEEFFEE---DDIIRMRAVIMVER 233
Query: 349 NSQKIILIG 357
+QK I+IG
Sbjct: 234 ETQKGIIIG 242
>gi|227513295|ref|ZP_03943344.1| GTP-binding protein Era [Lactobacillus buchneri ATCC 11577]
gi|227083496|gb|EEI18808.1| GTP-binding protein Era [Lactobacillus buchneri ATCC 11577]
Length = 300
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 158/255 (61%), Gaps = 6/255 (2%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN++SG+VA++G+PNVGKST N+++ QK++I+++K QTTR++I G+ + E Q++ D
Sbjct: 3 NPNYRSGFVAIVGRPNVGKSTFLNRVVAQKIAIMSDKAQTTRNKIQGVYTTDEAQVVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-HKDKLP 228
TPGI K + L MM + SA D ++ +V+A + D + + + D HK P
Sbjct: 63 TPGI-HKPQNKLGDFMMDSALSALKEVDAVLFMVNATERRGAGDNFIIDRLKDVHK---P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
I L++NK D I P ++ +E Y+ EV P+SA G+ V ++ ++ +LP GP Y
Sbjct: 119 IYLLINKIDEITPDDVMAIIEQYKNALSFKEVFPISALQGNNVPELLTSLIKELPNGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YPKD V++HPERF + E+IREK+ R E+P++ V + S K + IQ I+VE+
Sbjct: 179 YPKDQVTDHPERFVISELIREKVLQMTRQEIPHSTAVYIESIKKQDEVL-HIQATIIVER 237
Query: 349 NSQKIILIGKVSPFL 363
+ QK I+IGK L
Sbjct: 238 DGQKGIVIGKGGSML 252
>gi|404370264|ref|ZP_10975587.1| GTPase Era [Clostridium sp. 7_2_43FAA]
gi|226913614|gb|EEH98815.1| GTPase Era [Clostridium sp. 7_2_43FAA]
Length = 296
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 153/245 (62%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G ++Q++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNHIMGEKLSIVSNKPQTTRNNIQTILTGKDHQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L++ + R D+ + E + + K P+ LV+
Sbjct: 63 HKPK-HKLGEYMVNSAKDSIKEVDLVLFLINPEEEIGRGDKFIIETLKNQK--APVFLVV 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK L+ Y + E+IP+SA G V+ + + ++ +P GP YYP D+
Sbjct: 120 NKIDEFTQERVAKTLQMYSSELEFKEIIPISALRGKNVDKLVELMIETMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK R E+P+ V+++ K P+ I+V+++ EK+S K
Sbjct: 180 ITDVQERFVVSEIVREKALRTLREEIPHGIAVDIIQMKQSPSGTWHIEVDMLCEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|392988992|ref|YP_006487585.1| GTP-binding protein Era [Enterococcus hirae ATCC 9790]
gi|392336412|gb|AFM70694.1| GTP-binding protein Era [Enterococcus hirae ATCC 9790]
Length = 299
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 154/239 (64%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + PE Q+I DTPG
Sbjct: 4 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTPEAQLIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ SA D ++ ++ A + R D+ + E + + + P+ L+
Sbjct: 64 IHKPK-HRLGDFMVESAYSALREVDAVLFMISADQKRGRGDDFIIERLKNVQS--PVYLI 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P E+ +E Y +V+P+SA G+ V+ + + ++ ++P GP Y+P D
Sbjct: 121 INKIDKVHPDELLGIIEDYSAQMPFAQVVPISATEGNNVDRLMEVLIAEMPEGPQYFPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++SQ
Sbjct: 181 QVTDHPEYFIVSELIREKVLFLTRDEVPHSVAVVVDSMKRNENDKIQIQATIIVERDSQ 239
>gi|312869116|ref|ZP_07729290.1| ribosome biogenesis GTPase Era [Lactobacillus oris PB013-T2-3]
gi|417885590|ref|ZP_12529744.1| ribosome biogenesis GTPase Era [Lactobacillus oris F0423]
gi|311095362|gb|EFQ53632.1| ribosome biogenesis GTPase Era [Lactobacillus oris PB013-T2-3]
gi|341595512|gb|EGS38161.1| ribosome biogenesis GTPase Era [Lactobacillus oris F0423]
Length = 301
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 155/254 (61%), Gaps = 3/254 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + + Q+I D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYIVGQKVAIMSNVAQTTRNKIQGIYTSKDAQIIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPG+ K L M ++ SA D IV +V A + D + E + + + PI
Sbjct: 63 TPGV-HKPATKLGDFMERSTLSALDEVDAIVYVVSATEKRGPGDNFIIERL--KQVQQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D + P ++ ++ Y+ +IPVSA G+ V ++ + ++ LP GP YY
Sbjct: 120 YLVVNKIDQVHPNDLPGIVDQYKGSLPFKGIIPVSALQGNNVNELINELVAGLPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D +S+HPERF + E+IREK+FM R+EVP++ V+V S + I IVVE+
Sbjct: 180 PADQISDHPERFVIAEMIREKVFMLTRDEVPHSVAVDVTSIQREDAEHVHISANIVVERP 239
Query: 350 SQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 GQKGIIIGKKGQML 253
>gi|37523991|ref|NP_927368.1| GTP-binding protein Era [Gloeobacter violaceus PCC 7421]
gi|35214997|dbj|BAC92363.1| glr4422 [Gloeobacter violaceus PCC 7421]
Length = 304
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 154/256 (60%), Gaps = 19/256 (7%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P +SG+VA++G+PNVGKSTL N+++G+K++IV+ QTTR+R+ GI + P Q+IL DT
Sbjct: 8 PGFRSGFVAIVGRPNVGKSTLVNRLVGEKVAIVSPTAQTTRNRLRGILTLPTAQIILVDT 67
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------- 223
PG I K H L +++ N RSA +AD IV++VD +E G GD
Sbjct: 68 PG-IHKPQHRLGEVLVHNARSAAGSADGIVLVVDGS---------VEAGAGDRFIAESLK 117
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVI-PVSAKYGHGVEDIRDWILTKL 282
K P+ VLNK D ++ E Y K D + V +SA G G+E + + I++ L
Sbjct: 118 GSKAPVWPVLNKVDRRSRNQVEPIRESYRKLFDPELVFYEISALKGSGIEPLMESIISSL 177
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP YYP D+ ++ PERF +GE++RE++ + R EVP++ V + + T +
Sbjct: 178 PEGPYYYPPDLFTDQPERFIMGELVREQVLLATREEVPHSVAVVIDKVEEGETLTRVLAT 237
Query: 343 EIVVEKNSQKIILIGK 358
I+VE++SQKIILIGK
Sbjct: 238 -IMVERDSQKIILIGK 252
>gi|402776792|ref|YP_006630736.1| GTP-binding protein [Bacillus subtilis QB928]
gi|402481972|gb|AFQ58481.1| GTP-binding protein [Bacillus subtilis QB928]
Length = 316
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 156/257 (60%), Gaps = 3/257 (1%)
Query: 107 YASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 166
Y ++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 15 YMTNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTI 74
Query: 167 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 226
DTPGI + K H L MMK ++ D I+ +++A + + DE + E +
Sbjct: 75 FIDTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMS 131
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+ L++NK D I P ++ ++ Y K E++P+SA G+ +E + I LP GP
Sbjct: 132 TPVFLIVNKIDKIHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGP 191
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
+YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVV
Sbjct: 192 QFYPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVV 251
Query: 347 EKNSQKIILIGKVSPFL 363
E++SQK I+IGK L
Sbjct: 252 ERDSQKGIVIGKKGSLL 268
>gi|335040060|ref|ZP_08533198.1| GTP-binding protein Era-like-protein [Caldalkalibacillus thermarum
TA2.A1]
gi|334180024|gb|EGL82651.1| GTP-binding protein Era-like-protein [Caldalkalibacillus thermarum
TA2.A1]
Length = 303
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/266 (41%), Positives = 157/266 (59%), Gaps = 24/266 (9%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +SG+VA++G+PNVGKSTL NQ+IG K++I+++KPQTTR++I GI + E Q+I
Sbjct: 2 SEGTFRSGFVALIGRPNVGKSTLMNQIIGHKVAIMSDKPQTTRNKIQGIYTSAEGQIIFV 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVG------ 221
DTPGI + + + D M+ NV + D I+ LVDA +EG+G
Sbjct: 62 DTPGIHKPRTKLGDYMV--NVAQNTLREVDLILFLVDA-----------KEGLGPGDQWI 108
Query: 222 -DHKDKL--PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWI 278
+H ++ P+ LV+NK DL+ P E+ + Y + D EVIPVSA G+ V + + I
Sbjct: 109 INHLKEVSTPVFLVINKIDLVHPDELLPLITRYVELYDFKEVIPVSALQGNNVSRLMEQI 168
Query: 279 LTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-AK 337
L LP GP YYP D V++HPERF V E+IREK+ E+P++ V++ K R
Sbjct: 169 LRYLPEGPQYYPSDQVTDHPERFIVAELIREKVLQLTHEEIPHSIAVDIEEMKQRDNRGT 228
Query: 338 DFIQVEIVVEKNSQKIILIGKVSPFL 363
FI I E++SQK I+IGK L
Sbjct: 229 VFISAVIYTERDSQKKIVIGKQGRML 254
>gi|374602357|ref|ZP_09675350.1| GTPase Era [Paenibacillus dendritiformis C454]
gi|374391959|gb|EHQ63288.1| GTPase Era [Paenibacillus dendritiformis C454]
Length = 309
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 156/251 (62%), Gaps = 5/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 16 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 75
Query: 174 IEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++K + D M V +N + I+ LVD D+ + E + K K P++LV
Sbjct: 76 HKRKSKLGD--YMNQVAYNTLNEVEVILFLVDVSAGLGSGDKFVMEQLA--KVKTPVILV 131
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P E+ ++ Y + D E++P+SA +G+ V + + + T +P GP YYP D
Sbjct: 132 MNKIDQVHPDELPPMIKSYHELFDFAEIVPISALHGNNVTRLLEVLGTYMPEGPKYYPDD 191
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPE+F V E+IREKI R E+P++ V + + + +I I VE++SQK
Sbjct: 192 QITDHPEQFVVAELIREKILHLTREEIPHSIAVAIEDMRVQDNGVVYISAVIYVERDSQK 251
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 252 GIVIGKQGALL 262
>gi|451817762|ref|YP_007453963.1| GTPase Era [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783741|gb|AGF54709.1| GTPase Era [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 296
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQM+ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGEDYQMVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDKK--CPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK L+ Y + E+IP+SA G V+ + + + +P GP YYP D+
Sbjct: 120 NKVDESTQDRVAKSLQMYAEEFKFAEIIPISAIKGKNVDKLLELMKNSMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVQEKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEKGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|402834352|ref|ZP_10882954.1| GTP-binding protein Era [Selenomonas sp. CM52]
gi|402277970|gb|EJU27036.1| GTP-binding protein Era [Selenomonas sp. CM52]
Length = 297
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 150/252 (59%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
H+SG++AV+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + P+ Q++ DTP
Sbjct: 5 KHRSGFIAVVGRPNVGKSTLINSLIGQKIAIMSDKPQTTRTRILCILTEPDAQIVFLDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K H L M++ S D + +VDA + + + E + K P +L
Sbjct: 65 GI-HKPRHKLGEYMVRAAESTLKEVDAVFFVVDATEKMGPGERYIVERL--QATKCPCIL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DLI+ + LE Y K +P+SAK ++ + + LP GPAYYP+
Sbjct: 122 VVNKLDLIEKPAVLPILESYMKVYPFAGAVPISAKEEVNLDSLLAEVKKYLPEGPAYYPE 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D+V++ PER V E++REK + R+E+P+A V++ K RP +I+ I VE+ SQ
Sbjct: 182 DMVTDQPERLIVAELVREKALLATRDELPHAIAVDLDEMKERPKGGFYIRATIYVERESQ 241
Query: 352 KIILIGKVSPFL 363
K I+IG L
Sbjct: 242 KGIVIGAKGALL 253
>gi|417788392|ref|ZP_12436075.1| GTP-binding protein Era [Lactobacillus salivarius NIAS840]
gi|334308569|gb|EGL99555.1| GTP-binding protein Era [Lactobacillus salivarius NIAS840]
Length = 300
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 153/252 (60%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTP
Sbjct: 4 NFHSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+++ S D ++ +V+A + R D+ + E + + K PI L
Sbjct: 64 GI-HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP
Sbjct: 121 VINKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQ
Sbjct: 181 DQITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQ 240
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 241 KGIIIGKCGKML 252
>gi|259503181|ref|ZP_05746083.1| GTP-binding protein Era [Lactobacillus antri DSM 16041]
gi|259168838|gb|EEW53333.1| GTP-binding protein Era [Lactobacillus antri DSM 16041]
Length = 301
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 155/261 (59%), Gaps = 17/261 (6%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + + Q+I D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTLLNYIVGQKVAIMSNVAQTTRNKIQGIYTSKDAQIIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------ 223
TPG+ K L M ++ SA D IV +V A + + G GD+
Sbjct: 63 TPGV-HKPATKLGDFMERSTLSALDEVDAIVYVVSATE---------KRGPGDNFIIDRL 112
Query: 224 -KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 282
+ K P+ LV+NK D + P ++ + Y+ +IPVSA G+ V ++ + ++ L
Sbjct: 113 KQVKQPVYLVVNKIDQVHPNDLPDIVAQYKDALPFKGIIPVSALQGNNVNELINELVAGL 172
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP YYP D +S+HPERF + E+IREK+FM R+EVP++ V+V S + I
Sbjct: 173 PHGPQYYPADQISDHPERFVIAEMIREKVFMLTRDEVPHSVAVDVTSIQREDAEHVHISA 232
Query: 343 EIVVEKNSQKIILIGKVSPFL 363
IVVE+ QK I+IGK L
Sbjct: 233 NIVVERPGQKGIIIGKKGQML 253
>gi|337286350|ref|YP_004625823.1| GTP-binding protein Era [Thermodesulfatator indicus DSM 15286]
gi|335359178|gb|AEH44859.1| GTP-binding protein Era [Thermodesulfatator indicus DSM 15286]
Length = 306
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 150/250 (60%), Gaps = 12/250 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SGYVA++G PNVGKSTL NQ++G K++I T KPQTTR I G+ +G +Q+I DTPGI
Sbjct: 13 RSGYVALIGLPNVGKSTLLNQLLGYKVAIATPKPQTTRFPIRGVLTGENFQIIFVDTPGI 72
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC----KAPERIDEILEEGVGDHKDKLPI 229
+ K + + +M++ A D IV ++D KA E+I +IL K P
Sbjct: 73 HDAK-DLFNKIMVEQALKAIEEVDSIVFIIDVSNRNPKAEEKIIDIL------RKANKPA 125
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+L LNK DL+K GE+ ++++ + ++P+SA G+E++ I+ LP GP YY
Sbjct: 126 ILALNKIDLVKKGELLPIIDYFSQIYPFKAIVPISALERDGLEELVKEIVETLPEGPMYY 185
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEK 348
D +++ P+R EIIREK+FM R E+PYA V V ++ P IQ I VEK
Sbjct: 186 DPDTLTDQPQRLLAAEIIREKVFMLTRQEIPYATAVVVEEFQEDPERNLIIIQATIYVEK 245
Query: 349 NSQKIILIGK 358
+SQK I+IGK
Sbjct: 246 DSQKGIVIGK 255
>gi|395803315|ref|ZP_10482562.1| GTPase Era [Flavobacterium sp. F52]
gi|395434361|gb|EJG00308.1| GTPase Era [Flavobacterium sp. F52]
Length = 293
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 160/248 (64%), Gaps = 9/248 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQLVLSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ M +S MM V+SA +AD ++ +V+ + + ++ ++ + K+P+LL
Sbjct: 62 GIIKPAYEMQES-MMNFVKSAFEDADILIYMVEIGEQDLKDEDFFKKII---HAKIPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK D ++ +++ ++++ E+ P+SA V ++ I+ LP P YYPK
Sbjct: 118 LLNKIDNSNQEQLEQQVAFWKEKVPNAEIFPISALQNFNVPEVFGRIIELLPESPPYYPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFFV E IREKI + Y E+PYA ++ + + I++ I+VE++
Sbjct: 178 DQLTDKPERFFVNETIREKILLNYAKEIPYAVEIVTEEFH---ETDNIIRIRSVIMVERD 234
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 235 TQKGIIIG 242
>gi|390445557|ref|ZP_10233296.1| GTPase Era [Nitritalea halalkaliphila LW7]
gi|389661759|gb|EIM73356.1| GTPase Era [Nitritalea halalkaliphila LW7]
Length = 313
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 154/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++ DTPG
Sbjct: 23 HKAGFVNIIGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIVNEENYQVVFSDTPG 82
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ K + S MM V + +AD I+ + D + I+++LE ++ +P+LLV
Sbjct: 83 MLKPKYELHKS-MMGFVSMSLEDADVILFVTDLFETDSEIEDVLER---INQSGVPVLLV 138
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL K ++ ++ V VIP+SA+ +E I IL LP P +Y K+
Sbjct: 139 INKIDLSKENQLEDVTAYWTSRLKVHTVIPISAQELFNIERIMQEILDILPEHPPFYDKE 198
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ ERFF EIIREKIF+ Y+ E+PY+ +V++ + P I+ I VE+ SQK
Sbjct: 199 ELTDKTERFFASEIIREKIFVNYKKEIPYSTEVSIEDFYDEPDILK-IRAVIYVERKSQK 257
Query: 353 IILIG 357
ILIG
Sbjct: 258 GILIG 262
>gi|339448298|ref|ZP_08651854.1| GTPase [Lactobacillus fructivorans KCTC 3543]
Length = 302
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 157/263 (59%), Gaps = 17/263 (6%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A +KSG+VA++G+PNVGKST N++IGQK++I++ K QTTR++I GI + + Q++
Sbjct: 2 AETSKYKSGFVAIVGRPNVGKSTFLNRVIGQKVAIMSEKAQTTRNKIQGIYTTDDAQIVF 61
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--D 225
DTPGI + K + LD M + S+ D ++ +V A + G GD+ D
Sbjct: 62 IDTPGIHKPK-NKLDDYMDEAALSSLKEVDAVLFMVSATET---------RGAGDNYIID 111
Query: 226 KL-----PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILT 280
+L P+ LV+NK D I P + ++ Y++ D +V P+SA G+ V+++ + ++
Sbjct: 112 QLKQVNSPVYLVINKIDEINPNSLLPIMDTYKRAYDWADVFPISALQGNNVDELLNTLVA 171
Query: 281 KLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFI 340
KLP GP YYP D +++HPERF VGE+IREK+ R E+P++ V V KT+ I
Sbjct: 172 KLPEGPQYYPDDEITDHPERFIVGELIREKVLELTRQEIPHSVAVQVEKMKTQDNGNVHI 231
Query: 341 QVEIVVEKNSQKIILIGKVSPFL 363
I+VE+ Q+ ILIGK L
Sbjct: 232 DANIIVERKGQRGILIGKNGGML 254
>gi|414154882|ref|ZP_11411199.1| GTPase Era [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453713|emb|CCO09103.1| GTPase Era [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 302
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 152/252 (60%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N +SG+VA++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + + P+ Q++ DTP
Sbjct: 7 NFRSGFVALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLTRPDAQIVFLDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K H L M++ +A D ++ LV+A P D + E + + K P+ L
Sbjct: 67 GI-HKPRHKLGEYMVEVALNALKEVDVVLFLVEATDPPGAGDRYIAEQL--KQIKTPVFL 123
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DL+K ++ + Y+ EVIPVSA G VE + D I++ LP GP YYP
Sbjct: 124 MINKIDLVKKEDVLASIVRYKDLLPFAEVIPVSALAGDNVERLIDTIVSYLPAGPQYYPA 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D++++ PERF + EIIREK+ EVP++ V V + + I E++SQ
Sbjct: 184 DMITDRPERFIMAEIIREKVLHLTSEEVPHSVAVVVEQVQANNNGVVVVNAVIYTERDSQ 243
Query: 352 KIILIGKVSPFL 363
K ILIGK L
Sbjct: 244 KAILIGKGGAML 255
>gi|257869127|ref|ZP_05648780.1| GTP-binding protein Era [Enterococcus gallinarum EG2]
gi|357050006|ref|ZP_09111220.1| GTP-binding protein era [Enterococcus saccharolyticus 30_1]
gi|257803291|gb|EEV32113.1| GTP-binding protein Era [Enterococcus gallinarum EG2]
gi|355382489|gb|EHG29587.1| GTP-binding protein era [Enterococcus saccharolyticus 30_1]
Length = 299
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 152/240 (63%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HKSG+ A++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + P+ Q++ DTP
Sbjct: 3 THKSGFAAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTPDAQIVFIDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M++ SA D + ++ A + + D+ + E + K++ P+ L
Sbjct: 63 GIHKPK-HRLGDFMVETAYSALREVDVTLFMISADQKRGKGDDFIIERL--RKNETPVFL 119
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P E+ +E Y E++P+SA G+ E + ++ ++P GP Y+P+
Sbjct: 120 VINKIDKVHPDELLAIIEDYAAQMTFAEIVPISATEGNNFETLMRLVIDQMPEGPQYFPE 179
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPE F V E++REK+ + R+EVP++ V V S K K IQ IVVE++SQ
Sbjct: 180 DQITDHPEYFIVSELVREKVLLLTRDEVPHSVAVVVDSMKRDENDKIHIQATIVVERDSQ 239
>gi|37222111|gb|AAP49305.1| Uvs062 [uncultured bacterium]
Length = 304
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 158/254 (62%), Gaps = 21/254 (8%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N +G++LSI+T+K QTTRHRILGI +G ++Q++L DTP
Sbjct: 13 SHKAGFVNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQLVLSDTP 72
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ M +S MM V+SA +AD ++ +V+ + + + + + K+P+LL
Sbjct: 73 GIIKPAYEMQES-MMNFVKSAFEDADILIYMVEIGEQDLKDEAFFNKII---HAKIPVLL 128
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK D ++ +++ ++++ E+ P+SA V ++ I+ LP PAYYPK
Sbjct: 129 LLNKIDNSNQEQLEEQVAFWKEKVPNAEIFPISALQNFNVPEVFGRIIELLPESPAYYPK 188
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE-------- 343
D +++ PERFFV E IREKI + Y E+PYA ++ ++F + E
Sbjct: 189 DQLTDKPERFFVNETIREKILLNYSKEIPYAVEI---------VTEEFFEDEKIIRIRSI 239
Query: 344 IVVEKNSQKIILIG 357
I+VE+ +QK I+IG
Sbjct: 240 IMVERETQKGIIIG 253
>gi|116494998|ref|YP_806732.1| GTP-binding protein Era [Lactobacillus casei ATCC 334]
gi|122263585|sp|Q038T2.1|ERA_LACC3 RecName: Full=GTPase Era
gi|116105148|gb|ABJ70290.1| GTPase [Lactobacillus casei ATCC 334]
Length = 300
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 160/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA + V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMENNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|194467792|ref|ZP_03073778.1| GTP-binding protein Era [Lactobacillus reuteri 100-23]
gi|194452645|gb|EDX41543.1| GTP-binding protein Era [Lactobacillus reuteri 100-23]
Length = 301
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 3/242 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D I P ++ + ++ Y+ V+P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPEIVDQYKDTLPFKGVVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 350 SQ 351
Q
Sbjct: 240 GQ 241
>gi|311069130|ref|YP_003974053.1| GTP-binding protein Era [Bacillus atrophaeus 1942]
gi|419820222|ref|ZP_14343834.1| GTPase Era [Bacillus atrophaeus C89]
gi|310869647|gb|ADP33122.1| GTP-binding protein Era [Bacillus atrophaeus 1942]
gi|388475634|gb|EIM12345.1| GTPase Era [Bacillus atrophaeus C89]
Length = 301
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QHTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ +E + + LP GP +
Sbjct: 119 VFLIVNKIDQIHPDKLLLLIDEYRVRYPFKEIVPISALEGNNIETLLTQVEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V++ S K R + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVSIESIKARENGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKQGSLL 253
>gi|433462826|ref|ZP_20420397.1| GTP-binding protein Era [Halobacillus sp. BAB-2008]
gi|432188282|gb|ELK45486.1| GTP-binding protein Era [Halobacillus sp. BAB-2008]
Length = 301
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 158/254 (62%), Gaps = 6/254 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG++ ++G+PNVGKST N++IG+K++I+++KPQTTR++I G+ + E QMI DTP
Sbjct: 4 NFKSGFITIVGRPNVGKSTFMNRVIGEKIAIMSDKPQTTRNKIQGVYTDKEAQMIFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
GI + K + D M+ NV +N D ++ +++A + R D+ + + + + P+
Sbjct: 64 GIHKPKHRLGDYMV--NVAENTLNEVDAVLFMINAEEGYGRGDQFIIDRL--QRVDQPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + P E+ +E Y+ D +E+IP+SA G+ V + + LP GP +YP
Sbjct: 120 LIINKIDKVHPDELLPLIEQYKGMFDFEEIIPISALEGNNVNHLVSVLKNHLPEGPQFYP 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKN 349
+D +++HPERF + E IREK+ R EVP++ V + + R + +IQ I+VE+
Sbjct: 180 EDQITDHPERFVISEFIREKVLHLTREEVPHSIAVVIEGIEKRKNSNAVYIQAAIIVERK 239
Query: 350 SQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 240 SQKGIIIGKQGSML 253
>gi|260881589|ref|ZP_05404771.2| GTP-binding protein Era [Mitsuokella multacida DSM 20544]
gi|260848446|gb|EEX68453.1| GTP-binding protein Era [Mitsuokella multacida DSM 20544]
Length = 323
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 153/260 (58%), Gaps = 11/260 (4%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A HKSG++AV+G+PNVGKSTL N +IGQK++I+++KPQTT++RIL I + P+ Q++
Sbjct: 24 AKQAKHKSGFIAVIGRPNVGKSTLINTLIGQKIAIMSDKPQTTQNRILCILTEPDAQIVF 83
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE----ILEEGVGDH 223
DTPGI + K H L M+K D I+ +VDA E++ ILE
Sbjct: 84 LDTPGIHKPK-HKLGEYMVKAAEGTLKEVDAILFVVDAT---EKMGPGEYYILERLQATS 139
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K P++LV+NK DLI+ ++ + Y V+P+SAK ++ + + LP
Sbjct: 140 K---PVILVVNKLDLIEKEQVLPIISRYADKYPFVGVVPISAKAETNLDSLLTEVKKYLP 196
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YYP+D+V++ PER V E+IREK+ R+EVP+A V TRP +I+
Sbjct: 197 EGPQYYPEDMVTDQPERLIVAELIREKVLQLTRDEVPHAVAVETDEMTTRPNGDVYIRAT 256
Query: 344 IVVEKNSQKIILIGKVSPFL 363
I VE++SQK I+IG L
Sbjct: 257 IYVERDSQKGIIIGAKGAML 276
>gi|373110948|ref|ZP_09525210.1| GTP-binding protein Era [Myroides odoratimimus CCUG 10230]
gi|423132224|ref|ZP_17119874.1| GTP-binding protein Era [Myroides odoratimimus CCUG 12901]
gi|423136040|ref|ZP_17123685.1| GTP-binding protein Era [Myroides odoratimimus CIP 101113]
gi|423329808|ref|ZP_17307614.1| GTP-binding protein Era [Myroides odoratimimus CCUG 3837]
gi|371639245|gb|EHO04863.1| GTP-binding protein Era [Myroides odoratimimus CIP 101113]
gi|371639993|gb|EHO05602.1| GTP-binding protein Era [Myroides odoratimimus CCUG 12901]
gi|371641824|gb|EHO07404.1| GTP-binding protein Era [Myroides odoratimimus CCUG 10230]
gi|404602716|gb|EKB02403.1| GTP-binding protein Era [Myroides odoratimimus CCUG 3837]
Length = 295
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 157/246 (63%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+GYV ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G +YQ++ DTPG
Sbjct: 3 HKAGYVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDYQIVFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM V+SA +AD ++ +V+ + E DE + + K+P++L+
Sbjct: 63 II-KPAYELQESMMDFVKSAFEDADVLIYMVEIGER-ELKDEAFFARINN--SKVPVMLL 118
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D ++ +++ W EK + E+ P+SA + + D I+ LP+ P Y+PK
Sbjct: 119 LNKIDKSNQEQLEEQVTLWSEKVPNA-EIFPISALEKFNTQAVYDRIIELLPVSPPYFPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ ERFFV EIIREKI + Y EVPYA +V +K I+ I+VE++SQ
Sbjct: 178 DALTDKSERFFVNEIIREKILLNYDKEVPYAVEVETEEFKEEENIIR-IKAVIMVERDSQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|429739609|ref|ZP_19273359.1| ribosome biogenesis GTPase Era [Prevotella saccharolytica F0055]
gi|429156490|gb|EKX99121.1| ribosome biogenesis GTPase Era [Prevotella saccharolytica F0055]
Length = 293
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 155/246 (63%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + PE+ + LE+ G K+PI+L+
Sbjct: 62 VLKPNYKLQESMLAFS-ESALNDADILLYVTDVVENPEKNIDFLEKVKG---MKIPIILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D P + +E + + E++P+SAK G + + I LP P Y+ KD
Sbjct: 118 INKIDESNPKALGDIVERWHQLLPTAEILPISAKNKFGTDVLLKRIKELLPSSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
+++ P RFFV EIIREKI + Y E+PY+ +V V S+K T K+ I I VE++SQ
Sbjct: 178 QLTDKPARFFVSEIIREKILLYYDKEIPYSVEVKVESFKE--TDKNIHINATIYVERDSQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|334339735|ref|YP_004544715.1| GTP-binding protein Era [Desulfotomaculum ruminis DSM 2154]
gi|334091089|gb|AEG59429.1| GTP-binding protein Era [Desulfotomaculum ruminis DSM 2154]
Length = 302
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 150/252 (59%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++SG+VA++G+PNVGKSTL N+++GQK++I+++KPQTTRH+I + S + Q+I DTP
Sbjct: 7 GYRSGFVALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLSRNDAQIIFLDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K H L ++ A D ++ L +A P D+ + E + K P+ L
Sbjct: 67 GI-HKPRHKLGEHLVDVALGALKEVDVVLFLAEASDPPGAGDQYIAEQLKGLKT--PVFL 123
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DLIK EI +++ Y+ E++PVSA G V+ + D I+ LP GP YYP
Sbjct: 124 LLNKIDLIKKEEILERIHQYKDLAPFAEIVPVSALAGENVDRLIDVIIRYLPEGPQYYPA 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++V++ PERF + EI+REK+ E+P++ V V + R + I E++SQ
Sbjct: 184 EMVTDRPERFIMAEIVREKVLHLTSEEIPHSVAVVVEQMQKRSNGLVAVNAVIYTERDSQ 243
Query: 352 KIILIGKVSPFL 363
K ILIGK L
Sbjct: 244 KAILIGKGGKML 255
>gi|402846555|ref|ZP_10894867.1| GTP-binding protein Era [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402267956|gb|EJU17346.1| GTP-binding protein Era [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 300
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 157/246 (63%), Gaps = 5/246 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
H+SG+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DTP
Sbjct: 8 THRSGFVNIVGNPNVGKSTLMNLLVGERVSIITSKAQTTRHRIMGIVNTPELQIVYSDTP 67
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G++ + +SM+ + + G +AD ++ + D + ++ + LE G K P+LL
Sbjct: 68 GVLRPNYKLQESMLEFSESALG-DADVLLYVTDTVETADKNEFFLERVRG---VKCPVLL 123
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DL ++ + ++ + K E+IP+SA V+ ++ I + +P P Y+ K
Sbjct: 124 LINKVDLTTQDKLVELVDRWHKELPQAEIIPISALNNFNVQPLKKRIESLIPPSPPYFEK 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P RFFV EIIREK+ + Y+ E+PY+ +V V S+K + IQ IVVE++SQ
Sbjct: 184 DALTDRPARFFVTEIIREKVLLYYKKEIPYSVEVVVESFKEE-DERIHIQALIVVERDSQ 242
Query: 352 KIILIG 357
K I+IG
Sbjct: 243 KGIIIG 248
>gi|409096865|ref|ZP_11216889.1| GTPase Era [Pedobacter agri PB92]
Length = 298
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 158/254 (62%), Gaps = 18/254 (7%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V+++GKPNVGKSTL N ++G++LSI+T K QTTRHRILGI + EYQ++ DTPG
Sbjct: 3 HKAGFVSIIGKPNVGKSTLMNVLVGERLSIITPKAQTTRHRILGIVNEEEYQIVFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER---IDEILEEGVGDHKDKLPI 229
II+ K + +S MM V + +AD ++ + D + + +D+IL+ + P
Sbjct: 63 IIKPKYSLQES-MMSFVNGSLTDADVLLFVTDINETHDEDDVLDKILDRDI-------PT 114
Query: 230 LLVLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++++NK D ++ +K+ W EK V + +SA H V+ I +L LP P Y
Sbjct: 115 IVLINKIDKALQEQVDEKIAYWQEKLNPV-SIYAISALRKHNVDGIMAHVLDLLPEHPPY 173
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----AKDFIQVE 343
Y K+ +++ ERFFV EIIREKIF+ Y+ E+PY+ +V V S+K A I E
Sbjct: 174 YDKEDLTDRSERFFVSEIIREKIFLNYQKEIPYSTEVIVKSFKEEALKNGKGAMVRIMAE 233
Query: 344 IVVEKNSQKIILIG 357
IVVE++SQK ILIG
Sbjct: 234 IVVERDSQKNILIG 247
>gi|138896062|ref|YP_001126515.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2]
gi|134267575|gb|ABO67770.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2]
Length = 302
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 157/252 (62%), Gaps = 4/252 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + E Q+I DTPG
Sbjct: 6 YKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDEAQIIFIDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ + K H L MMK +A D I+ +V+A + R + + E + + P+ LV
Sbjct: 66 VHKPK-HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLNEVNT--PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P E+ ++ Y+ E++P+SA G+ VE + + I +LP GP YYP D
Sbjct: 123 INKIDRVHPDELLPIIDRYKDLYTFAEIVPISALEGNNVERLLEQIKQRLPEGPQYYPPD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQ 351
+++HPE+F + E+IREK R EVP++ V V + R T ++ IVVE++SQ
Sbjct: 183 QITDHPEQFIIAELIREKALHLTREEVPHSIAVVVERIERREETGTVYVGAVIVVERDSQ 242
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 243 KGIIIGKQGRML 254
>gi|83589464|ref|YP_429473.1| GTP-binding protein Era [Moorella thermoacetica ATCC 39073]
gi|83572378|gb|ABC18930.1| GTP-binding protein Era [Moorella thermoacetica ATCC 39073]
Length = 301
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 153/247 (61%), Gaps = 5/247 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++SG+ ++G+PN GKSTL N+++G+K++I+++KPQTTR++ILG+ + YQ++ DTPG
Sbjct: 5 YRSGFAGLIGRPNAGKSTLLNRLVGRKVAIMSDKPQTTRNKILGVLTATAYQIVFLDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPILL 231
I K H L M+ R+ D ++ +VDA + P +E + + K+ +P++L
Sbjct: 65 I-HKPRHQLGEYMVAVARNTLAEVDVVLYVVDAAEEPGAGEEYI---ISRLKEVDVPVIL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DL+ + ++ E++ DV V VSA G ++ + D I T LP GP YYP
Sbjct: 121 ILNKMDLVAGETLIRREEFFRARLDVAAVRAVSALVGTNLDTLPDLISTYLPPGPQYYPP 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D+V++ PE+F + E+IRE++ R EVP+A V V RP ++ I VE++SQ
Sbjct: 181 DMVTDQPEKFVMAELIREQVLRATREEVPHAVAVVVEEIAERPNDYLYVDAVIYVERDSQ 240
Query: 352 KIILIGK 358
K I+IG+
Sbjct: 241 KGIIIGE 247
>gi|227544911|ref|ZP_03974960.1| GTP-binding protein Era [Lactobacillus reuteri CF48-3A]
gi|338204345|ref|YP_004650490.1| GTP-binding protein Era [Lactobacillus reuteri SD2112]
gi|227185123|gb|EEI65194.1| GTP-binding protein Era [Lactobacillus reuteri CF48-3A]
gi|336449585|gb|AEI58200.1| GTP-binding protein Era [Lactobacillus reuteri SD2112]
Length = 301
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 3/242 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D I P ++ + ++ Y+ ++P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPEIVDQYKDTLPFKGIVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 350 SQ 351
Q
Sbjct: 240 GQ 241
>gi|51245541|ref|YP_065425.1| GTP-binding protein Era-like protein [Desulfotalea psychrophila
LSv54]
gi|50876578|emb|CAG36418.1| probable GTP-binding protein Era homolog [Desulfotalea psychrophila
LSv54]
Length = 313
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 151/249 (60%), Gaps = 5/249 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG VA++G PN GKSTL NQ++GQK+SIVT+KPQTTR+RILGI + YQ++L DTPG
Sbjct: 18 KSGMVAIVGPPNAGKSTLMNQLLGQKISIVTSKPQTTRNRILGIVNDDAYQIVLLDTPG- 76
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC--KAPERIDEILEEGVG-DHKDKLPIL 230
+ K L+ MM+ + D ++ LVD P+ + + EE G K + P +
Sbjct: 77 LHKADEPLNIEMMRVALESLSEVDAVLFLVDVSLPLPPKALAKQREELAGYMEKIESPAI 136
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LVLNK DLI ++ +E Y K V+P+SA G G +++ IL +P+GP Y+P
Sbjct: 137 LVLNKVDLIDKQKLLPMIESYAKLFPFKAVVPISALNGDGADNLLKEILELIPVGPRYFP 196
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKN 349
+DI ++ ERF EI+REK+F+ E+PY+ V S+K K I IVVE+
Sbjct: 197 EDIPTDATERFLAAEIVREKVFLLTGQELPYSAATLVESFKEDEQKKLITIHATIVVERP 256
Query: 350 SQKIILIGK 358
SQK ++IGK
Sbjct: 257 SQKGMIIGK 265
>gi|421768698|ref|ZP_16205408.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP2]
gi|421771151|ref|ZP_16207812.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP3]
gi|411185547|gb|EKS52674.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP2]
gi|411186586|gb|EKS53710.1| GTP-binding protein Era [Lactobacillus rhamnosus LRHMDP3]
Length = 300
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 158/258 (61%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+ NVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRANVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KD 225
I + K + LD M K S D I+ +V A DE ++G GD +
Sbjct: 64 IHKPK-NELDDYMDKAALSTLNQVDAILFMVAA-------DE--QKGAGDAYILRQLTEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L+LNK DL+KP ++ +E Y+ +V P+SA G+ V+++ + + LP G
Sbjct: 114 KKPVYLILNKIDLVKPDDLLPLIESYQHDYHFAQVFPISATMGNNVDELLNSLTATLPEG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>gi|148543969|ref|YP_001271339.1| GTP-binding protein Era [Lactobacillus reuteri DSM 20016]
gi|184153364|ref|YP_001841705.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|227364882|ref|ZP_03848928.1| GTP-binding protein Era [Lactobacillus reuteri MM2-3]
gi|325682493|ref|ZP_08162010.1| GTP-binding protein Era [Lactobacillus reuteri MM4-1A]
gi|148531003|gb|ABQ83002.1| GTP-binding protein Era [Lactobacillus reuteri DSM 20016]
gi|183224708|dbj|BAG25225.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|227070086|gb|EEI08463.1| GTP-binding protein Era [Lactobacillus reuteri MM2-3]
gi|324978332|gb|EGC15282.1| GTP-binding protein Era [Lactobacillus reuteri MM4-1A]
Length = 301
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 3/242 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + PE Q+I D
Sbjct: 3 NPNYKSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI K L M K+ SA D ++ +V A + D+ + E + K PI
Sbjct: 63 TPGI-HKPSTKLGDFMEKSAMSALDEVDAVLFVVSATEKRGPGDDFIIERL--KKVNQPI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D I P ++ + ++ Y+ ++P+SA G+ V ++ + I+ LP GP YY
Sbjct: 120 FLVVNKIDQINPNDLPEIVDQYKDTLPFKGIVPISALQGNNVNNLINDIIKILPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D VS+HPERF + E+IREK+F+ R EVP++ V+V S K I I+VE+
Sbjct: 180 PADQVSDHPERFVIAEMIREKVFLLTRQEVPHSVAVDVTSIKREDENHIHISANIIVERP 239
Query: 350 SQ 351
Q
Sbjct: 240 GQ 241
>gi|218288620|ref|ZP_03492897.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1]
gi|218241277|gb|EED08452.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1]
Length = 298
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 152/253 (60%), Gaps = 4/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKSTL N ++GQK++I++N+PQTTR+RI G+ + QMI DTP
Sbjct: 2 TYKSGFVALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+ D IV++VDA +E + + + + + P++L
Sbjct: 62 GIHKPK-HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEEEIAKQL--ERVRTPVIL 118
Query: 232 VLNKKD-LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LNK D L + K++E Y+ +E +P+SA G V+ + + I +LP GP YYP
Sbjct: 119 ALNKVDALDDRALVLKRIEEYQALRPFEEYVPISALKGEQVDLLAELIERRLPEGPKYYP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D++++ PE F + EI+REK+ M R+EVP++ V V + R + ++ I E+ S
Sbjct: 179 DDMITDQPESFIISEIVREKVLMLTRDEVPHSVMVAVEHMERRASDTLYVSAVIYTERES 238
Query: 351 QKIILIGKVSPFL 363
QK ILIGK L
Sbjct: 239 QKAILIGKQGQML 251
>gi|15613930|ref|NP_242233.1| Era/ThdF family GTP-binding protein [Bacillus halodurans C-125]
gi|13959358|sp|Q9KD52.1|ERA_BACHD RecName: Full=GTPase Era
gi|10173983|dbj|BAB05086.1| GTP-binding protein (Era/ThdF family) [Bacillus halodurans C-125]
Length = 304
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 155/255 (60%), Gaps = 12/255 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA----PERIDEILEEGVGDHKDKLPI 229
+ K H L MMK ++ D I+ +VD +A E I E L+E K P+
Sbjct: 69 HKPK-HKLGDFMMKVAQNTLKEVDLILYVVDGAEAFGPGEEFIIERLKEA------KTPV 121
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+LV+NK D + P ++ +E Y + +EV+PVSA G+ V + I L GP YY
Sbjct: 122 ILVINKIDKVHPDDLLSLIETYRHKHEFEEVVPVSALQGNNVPTLLLEITKHLSEGPQYY 181
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEK 348
P D V++HPERF + E+IREK+ R E+P++ V + K R +I IVVE+
Sbjct: 182 PSDQVTDHPERFVIAELIREKVLHLTREEIPHSIAVVIEQIKRRQHQDTVYIGATIVVER 241
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 242 SSQKGIIIGKQGKML 256
>gi|424780584|ref|ZP_18207457.1| GTP-binding protein Era [Catellicoccus marimammalium M35/04/3]
gi|422842986|gb|EKU27433.1| GTP-binding protein Era [Catellicoccus marimammalium M35/04/3]
Length = 299
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 155/251 (61%), Gaps = 3/251 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVALIGRPNVGKSTLLNRIVGQKVAIMSDKAQTTRNKIQGVYTTEDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K + D M+++ SA D I LV A + R DE + E + K P+ LV
Sbjct: 64 IHKPKSRLGD-FMVESAYSALHEVDAICFLVSADQKMGRGDEFIIERL--RKVDTPVYLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ +E Y VIP+SA G+ V+++ ++ +LP GP YYP+D
Sbjct: 121 INKIDKVHPNDLLPLIEQYMAAYPFKAVIPISATQGNNVDELLKTLVEELPEGPQYYPED 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
V++HPE F V E+IREK+ R EVP++ V V + K +Q I+VE+ SQK
Sbjct: 181 QVTDHPEYFIVSELIREKVLELTREEVPHSVAVVVDKMRGDENGKIHVQATIIVERASQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKNGQML 251
>gi|288930106|ref|ZP_06423944.1| GTP-binding protein Era [Prevotella sp. oral taxon 317 str. F0108]
gi|288328579|gb|EFC67172.1| GTP-binding protein Era [Prevotella sp. oral taxon 317 str. F0108]
Length = 293
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ +V SA +AD ++ + D + PE+ + LE+ G K+P+LL+
Sbjct: 62 VLKPNYKLQESMLAFSV-SALSDADVLLYVTDVVEDPEKNADFLEKVRG---MKIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + E++P+SAK G + + I LP P Y+ KD
Sbjct: 118 INKIDESDQKTLGDIVERWHALLPKAEILPISAKNKFGTDLLLRRIQELLPESPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE+ SQK
Sbjct: 178 QLTDKPARFFVSEIIREKILLYYDKEIPYSVEVKVERFK-ETEKKIHINAVIYVERESQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIVIG 241
>gi|429755609|ref|ZP_19288249.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429173583|gb|EKY15101.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 293
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 156/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PIL 230
II K + L + MM V+SA +AD ++ +V+ + E+ +E ++L P+L
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + +++ ++++ E+ P+SA E + + I+ LP PA++
Sbjct: 116 LLINKVDTSDQNVLEEQVAYWKEKVPRAEIYPISALRNFQTEVVFNRIIELLPESPAFFQ 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI + Y+ E+PY+ +V S+ T I+ I+VE+ S
Sbjct: 176 KDQLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESFADSETIIH-IRSVIMVERES 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|365902690|ref|ZP_09440513.1| GTPase [Lactobacillus malefermentans KCTC 3548]
Length = 301
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 163/261 (62%), Gaps = 17/261 (6%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG++A++G+PNVGKST N+++GQK++I+++K QTTR++I GI + E Q++ D
Sbjct: 3 NPNYKSGFLAIIGRPNVGKSTFLNRVVGQKVAIMSDKAQTTRNKIQGIYTTDEAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL 227
TPG+ + K + L M+K+ S+ D ++ +V+A DE + G GD+ D+L
Sbjct: 63 TPGVHKPK-NQLGDFMVKSALSSLNEVDAVLFMVNA-------DE--KRGAGDNFIIDRL 112
Query: 228 -----PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 282
PI LV+NK D + P ++ ++ ++ D EV P+SA G+ V ++ + ++ L
Sbjct: 113 KTVKKPIYLVINKIDQVHPDDLIVIVDQFKNALDWKEVYPISALEGNNVNELLNKLVDNL 172
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP YYP D +++HPERF V E+IREK+ R E+P++ V V + K IQ
Sbjct: 173 PQGPQYYPDDQITDHPERFIVSELIREKVLQLTRQEIPHSVAVVVEKMARQDEQKIHIQA 232
Query: 343 EIVVEKNSQKIILIGKVSPFL 363
IVV++++QK ILIGK L
Sbjct: 233 TIVVDRSTQKGILIGKGGSML 253
>gi|399926842|ref|ZP_10784200.1| GTPase Era [Myroides injenensis M09-0166]
Length = 295
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 160/248 (64%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI + EYQ+I DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNDEEYQIIFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM V+SA +AD ++ +V+ + E DE + + K+P+LL+
Sbjct: 63 II-KPAYELQESMMDFVKSAFEDADVLIYMVEVGEK-ELKDEAFFNRITNA--KVPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D G++ +++E W+ K + E+ P+SA + + D I+ LP+ P +Y K
Sbjct: 119 INKIDKSNQGQLEEQVELWHSKVPNA-EIFPISALERFNTQAVFDRIVELLPVCPPFYSK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ PERFFV EIIREKI + Y E+PYA + V + +D I++ I+VE++
Sbjct: 178 DALTDKPERFFVNEIIREKILLNYDKEIPYAVE---VETEEFFEEEDIIRIRSVIMVERD 234
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 235 TQKGIIIG 242
>gi|196248955|ref|ZP_03147655.1| GTP-binding protein Era [Geobacillus sp. G11MC16]
gi|196211831|gb|EDY06590.1| GTP-binding protein Era [Geobacillus sp. G11MC16]
Length = 302
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 157/252 (62%), Gaps = 4/252 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + E Q+I DTPG
Sbjct: 6 YKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDEAQIIFIDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ + K H L MMK +A D I+ +V+A + R + + E + + P+ LV
Sbjct: 66 VHKPK-HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLNEVNT--PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P E+ ++ Y+ E++P+SA G+ VE + + I +LP GP YYP D
Sbjct: 123 INKIDRVHPDELLPIIDRYKDLYPFAEIVPISALEGNNVERLLEQIKQRLPEGPQYYPPD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNSQ 351
+++HPE+F + E+IREK R EVP++ V V + R T ++ IVVE++SQ
Sbjct: 183 QITDHPEQFIIAELIREKALHLTREEVPHSIAVVVERIERREETGTVYVGAVIVVERDSQ 242
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 243 KGIIIGKQGRML 254
>gi|297584643|ref|YP_003700423.1| GTP-binding protein Era [Bacillus selenitireducens MLS10]
gi|297143100|gb|ADH99857.1| GTP-binding protein Era [Bacillus selenitireducens MLS10]
Length = 302
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 150/247 (60%), Gaps = 4/247 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
KSG+ A++G+PNVGKSTL NQ++GQK++I+++KPQTTR+RI G+ + Q++ DTPG
Sbjct: 6 QKSGFAALVGRPNVGKSTLLNQVLGQKIAIMSDKPQTTRNRIQGVLTDERGQIVFIDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M K + A D ++ LVDA + DE + + + + P+ LV
Sbjct: 66 IHKPK-HRLGDFMTKLAQQALREVDVVLFLVDAKEGKGAGDEYIIRKLENLET--PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P E+ + Y+ EVIPVSA G+ VE + + + L GP YYP+D
Sbjct: 123 INKIDEVHPEELLSIIAGYKDLYPFAEVIPVSALNGNNVETLLEQVFKYLEPGPMYYPED 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA-KDFIQVEIVVEKNSQ 351
V++HPERF + E+IREKI EVP++ V + K R K ++ ++VE+ SQ
Sbjct: 183 QVTDHPERFLISEMIREKILHMTEEEVPHSIAVEIEQIKRRKKGNKVYVAAVVIVERKSQ 242
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 243 KGIIIGK 249
>gi|148265178|ref|YP_001231884.1| GTP-binding protein Era [Geobacter uraniireducens Rf4]
gi|259645947|sp|A5G693.1|ERA_GEOUR RecName: Full=GTPase Era
gi|146398678|gb|ABQ27311.1| GTP-binding protein Era [Geobacter uraniireducens Rf4]
Length = 297
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 151/250 (60%), Gaps = 3/250 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +SG+V+++G+PNVGKSTL N+++G K+ I ++KPQTTR+RI GI + P QM+
Sbjct: 2 TEKQFRSGFVSIIGRPNVGKSTLLNRILGDKIVITSDKPQTTRNRIQGIHNLPGCQMVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K L+ M+ S+ D I+ LV+A P + ++ E + + P
Sbjct: 62 DTPGIHRAK-SKLNKYMVDVALSSIKEVDVILFLVEADAKPANQEGMILELLANADA--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL+ + +++ Y E++PVSA G GVE + + + +P GP Y
Sbjct: 119 VLLVINKIDLVAKEALLERIAAYAALYPFREIVPVSALSGDGVERLVEVVHGFIPAGPPY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
+P DI+++ PERF V E+IREKIF +EVPY+ V V S+K R I I VE+
Sbjct: 179 FPDDILTDLPERFIVAEMIREKIFRLTHDEVPYSVAVVVESFKERADGLVSIAAAINVER 238
Query: 349 NSQKIILIGK 358
SQK I+IGK
Sbjct: 239 ESQKGIVIGK 248
>gi|452856293|ref|YP_007497976.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452080553|emb|CCP22316.1| GTP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 301
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +++A + + DE + E +G + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGKGDEFIIEKLG--QTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ VE + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRTRYPFKEIVPISALEGNNVETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R EVP++ V + K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEVPHSIAVAIEFIKGQENGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGALL 253
>gi|205374162|ref|ZP_03226962.1| GTP-binding protein Era [Bacillus coahuilensis m4-4]
Length = 306
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 155/257 (60%), Gaps = 6/257 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + Q++
Sbjct: 6 SQQAFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTLADSQIVFI 65
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D ++ +VD + + DE + E + + P
Sbjct: 66 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDIVLFMVDVAEGIGKGDEFIIEKLKNVS--TP 122
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LVLNK D I P E+ +E Y + E++P+SA G+ V+ + D + +P GP Y
Sbjct: 123 VFLVLNKIDAIHPDELFSIIEEYRSRFEFTEIVPISALEGNNVDTLLDQLKKYMPEGPQY 182
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVV 346
YP D V++HPE F V E+IREK R E+P++ V VV +D I V I+V
Sbjct: 183 YPADQVTDHPEHFIVSELIREKALHLTREEIPHSIAV-VVDKMKADNGRDTIHVMATIMV 241
Query: 347 EKNSQKIILIGKVSPFL 363
E++SQK I+IGK L
Sbjct: 242 ERDSQKGIVIGKKGALL 258
>gi|328957481|ref|YP_004374867.1| GTP-binding protein Era [Carnobacterium sp. 17-4]
gi|328673805|gb|AEB29851.1| GTP-binding protein Era [Carnobacterium sp. 17-4]
Length = 302
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 148/239 (61%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 7 HKSGFVSIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTTPESQIVFIDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+ + SA D I+ +V+ + D + E + K P+ LV
Sbjct: 67 IHKPK-HRLGDFMVNSAFSAFREVDVILFMVNITEKRGPGDNFIMEKLKTVKS--PVFLV 123
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D I P ++ +E Y D +VIP+SA G+ V+ + + I LP GP +YP+D
Sbjct: 124 LNKIDKIHPDQLLPIIEDYRSLVDFAQVIPISASEGNNVDTLLEEITKYLPTGPQFYPED 183
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
V++HPE F V E+IREK+ R EVP++ V V S + K + I+VE++SQ
Sbjct: 184 QVTDHPEYFIVSELIREKVLELTREEVPHSVAVVVESMQRNELGKVQVHAAIIVERSSQ 242
>gi|16079583|ref|NP_390407.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
168]
gi|221310453|ref|ZP_03592300.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
168]
gi|221314776|ref|ZP_03596581.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319699|ref|ZP_03600993.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323976|ref|ZP_03605270.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321312012|ref|YP_004204299.1| GTPase Era [Bacillus subtilis BSn5]
gi|418032295|ref|ZP_12670778.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428280018|ref|YP_005561753.1| GTP-binding protein Era [Bacillus subtilis subsp. natto BEST195]
gi|449095023|ref|YP_007427514.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452914939|ref|ZP_21963565.1| GTP-binding protein Era [Bacillus subtilis MB73/2]
gi|1168646|sp|P42182.1|ERA_BACSU RecName: Full=GTPase Era; AltName: Full=Bex protein
gi|606745|gb|AAB59994.1| Bex [Bacillus subtilis]
gi|1303826|dbj|BAA12482.1| YqfH [Bacillus subtilis]
gi|2634961|emb|CAB14458.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str. 168]
gi|291484975|dbj|BAI86050.1| GTP-binding protein Era [Bacillus subtilis subsp. natto BEST195]
gi|320018286|gb|ADV93272.1| GTPase Era [Bacillus subtilis BSn5]
gi|351471158|gb|EHA31279.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959775|dbj|BAM53015.1| GTP-binding protein Era [Bacillus subtilis BEST7613]
gi|407965350|dbj|BAM58589.1| GTP-binding protein Era [Bacillus subtilis BEST7003]
gi|449028938|gb|AGE64177.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452115287|gb|EME05683.1| GTP-binding protein Era [Bacillus subtilis MB73/2]
Length = 301
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y K E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|227537544|ref|ZP_03967593.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33300]
gi|227242596|gb|EEI92611.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33300]
Length = 292
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 158/254 (62%), Gaps = 10/254 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V+++GKPN GKSTL N ++G+K+SI+T K QTTRHRI+GI + +Q++ DTP
Sbjct: 2 SHKAGFVSIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRIIGIVNDENHQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE--ILEEGVGDHKDKLPI 229
G+I K + L MM V+ + I+AD I+ + D E+ DE ++E+ K P+
Sbjct: 62 GVI-KPNYSLQESMMNFVQGSLIDADIILFVTDIN---EKYDENDVIEKL---RKTSSPV 114
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+++NK D ++ K+E++++ + D + +SA H V I ++I KLP YY
Sbjct: 115 AVLINKIDKSTEEDVKAKIEFWKEKLNPDTIFAISALLQHNVVAIMEYIKEKLPEHAPYY 174
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
KD +++ RFFV E+IREK+F Y E+PY+ +V + SYK P I EI+VE++
Sbjct: 175 EKDELTDKSMRFFVSEMIREKVFKLYDKEIPYSTEVIITSYKEEPKITR-IAAEIIVERD 233
Query: 350 SQKIILIGKVSPFL 363
SQK ILIGK +
Sbjct: 234 SQKNILIGKAGEMI 247
>gi|281421767|ref|ZP_06252766.1| GTP-binding protein Era [Prevotella copri DSM 18205]
gi|281404262|gb|EFB34942.1| GTP-binding protein Era [Prevotella copri DSM 18205]
Length = 293
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ E LE+ K ++P+LL+
Sbjct: 62 VLKPNYKM-QEMMLAFSESALADADVLLYVTDVIENPEKNMEFLEKV---KKMQIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D P ++ +E + E++P+SAK G + + I LP PA++ KD
Sbjct: 118 INKIDQSDPKKLGDIVEKWHSLLPNAEILPISAKNKFGTDMLLKRIKELLPESPAFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQK
Sbjct: 178 QLTDKPARFFVSEIIREKILLYYDKEIPYSVEVRVERFK-EDEKRIHINAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|260910018|ref|ZP_05916701.1| GTP-binding protein Era [Prevotella sp. oral taxon 472 str. F0295]
gi|260635848|gb|EEX53855.1| GTP-binding protein Era [Prevotella sp. oral taxon 472 str. F0295]
Length = 293
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEVQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I++ + +SM+ +V SA +AD ++ + D + PE+ + LE+ G K+P+LL+
Sbjct: 62 ILKPNYKLQESMLAFSV-SALNDADVLLYVTDVVEDPEKNADFLEKVRG---MKIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + E++P+SAK G + + I LP P Y+ KD
Sbjct: 118 INKIDESDQKSLGDIVERWHALLPNAEILPISAKNKFGTDLLLRRIQELLPESPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE+ SQK
Sbjct: 178 QLTDKPARFFVSEIIREKILLYYDKEIPYSVEVKVERFK-ETEKKININAVIYVERESQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIVIG 241
>gi|56963446|ref|YP_175177.1| Era, Era/TrmE family GTP-binding protein [Bacillus clausii KSM-K16]
gi|81822138|sp|Q5WHD9.1|ERA_BACSK RecName: Full=GTPase Era
gi|56909689|dbj|BAD64216.1| Era/TrmE family GTP-binding protein Era [Bacillus clausii KSM-K16]
Length = 303
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 157/254 (61%), Gaps = 11/254 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N++IGQK++I+++KPQTTR+++ G+ + + Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNRVIGQKIAIMSDKPQTTRNKVQGVLTRDDAQLVFMDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCI--VVLVDACKAP--ERIDEILEEGVGDHKDKLPI 229
+ K H L MMK ++ D I VV DA P + I E L+E K P+
Sbjct: 69 HKPK-HRLGDFMMKVAKNTLREVDLILYVVEADAKFGPGEQYIIERLQE------TKTPV 121
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L++NK D + P E+ K ++ Y+ E+IP+SA G+ V + + I+ + GP YY
Sbjct: 122 FLLINKIDKVSPEELLKVIDLYKDRYPFAEIIPISALEGNNVPTLVEQIVEHMEEGPQYY 181
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D V++HPERF + E+IREK+ + E+P++ V + K R K ++ ++VE++
Sbjct: 182 PADQVTDHPERFIIAELIREKVLHLTKEEIPHSVAVVIEQIKKRDNGKVYVGATVIVERS 241
Query: 350 SQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 242 SQKGIIIGKHGAML 255
>gi|406669572|ref|ZP_11076842.1| GTP-binding protein Era [Facklamia ignava CCUG 37419]
gi|405583268|gb|EKB57236.1| GTP-binding protein Era [Facklamia ignava CCUG 37419]
Length = 301
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 152/249 (61%), Gaps = 8/249 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+++++G+PNVGKSTL N+ +GQK++I+++KPQTTR+RI G+ + E Q+I DTP
Sbjct: 4 NFKSGFISIIGRPNVGKSTLINRFVGQKIAIMSDKPQTTRNRIQGVLTNEEGQIIFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PI 229
GI + K H L M++ + D ++V+V+A + D + V DH L P
Sbjct: 64 GIHKPK-HALGDFMVQTALKSTRGVDGVLVVVNATEPIGPGDRV----VLDHVKLLDIPK 118
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK DLI EI ++ Y + DEVIP+SA G+ + + D I++ LP GP YY
Sbjct: 119 FLVINKVDLIDQSEIFDIIKTYTDEYEFDEVIPISATEGYNTDILLDKIMSILPTGPQYY 178
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEK 348
P D V +HPE F V E+IREK+ R E+P++ V V S + IQ I+VE+
Sbjct: 179 PADQVVDHPEYFIVQELIREKVLHLTREEIPHSVAVQVESMHRDVEDQSVEIQAVIIVER 238
Query: 349 NSQKIILIG 357
SQK I+IG
Sbjct: 239 KSQKGIIIG 247
>gi|357008310|ref|ZP_09073309.1| GTPase Era [Paenibacillus elgii B69]
Length = 304
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 149/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 12 KSGFVAIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDQAQIVFLDTPGI 71
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L M+K A D I+ L+D + D + E + K K P++LV+
Sbjct: 72 -HKPSSKLGDYMIKAAEGALSEVDAILFLIDVVEGLGGGDRYIIETL--KKVKTPVILVM 128
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P + + Y+ E++P+SA +G+ V + + ++ LP GP YYP D
Sbjct: 129 NKIDQIHPEALLSVITTYKDLYPFAEIVPISAMHGNNVNTLLEQVIKFLPEGPQYYPADQ 188
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPE+F E+IREKI R E+P++ V++ + I I VE++SQK
Sbjct: 189 VTDHPEQFVCAELIREKILHLTREEIPHSIAVSIEDMRVEANGVVHISAVIYVERDSQKG 248
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 249 IIIGKKGALL 258
>gi|296333313|ref|ZP_06875766.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675182|ref|YP_003866854.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii str.
W23]
gi|443631824|ref|ZP_21116004.1| GTP-binding protein Era [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|296149511|gb|EFG90407.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413426|gb|ADM38545.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii str.
W23]
gi|443347939|gb|ELS61996.1| GTP-binding protein Era [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 301
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + K P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QKMSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|241895551|ref|ZP_04782847.1| GTP-binding protein Era [Weissella paramesenteroides ATCC 33313]
gi|241871129|gb|EER74880.1| GTP-binding protein Era [Weissella paramesenteroides ATCC 33313]
Length = 302
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 151/257 (58%), Gaps = 17/257 (6%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG++A++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E QMI
Sbjct: 2 SEQEFKSGFIALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTNEGQMIFM 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD------ 222
DTPGI K + L M+K SA +D + +LV+A + E GVGD
Sbjct: 62 DTPGI-HKPHNSLGDFMVKTAMSALRESDMVWLLVNADQ---------ERGVGDDFIIKR 111
Query: 223 -HKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
+ P+ L++NK DLI E+ ++ Y D E+ P+SA G GV ++ + +
Sbjct: 112 LKESNTPVYLIINKVDLINRAEVLNQIADYSAQMDFAEIFPISALTGEGVPELLAFTMDH 171
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+ GP YYP D +++HPERF + E+IREK+ R EVP++ V + + + +Q
Sbjct: 172 MAAGPQYYPADQLTDHPERFIMSELIREKVLELTRQEVPHSVAVVIDKIEREDEQRLHVQ 231
Query: 342 VEIVVEKNSQKIILIGK 358
IVVE+ SQK I+IGK
Sbjct: 232 ATIVVERPSQKNIIIGK 248
>gi|398311471|ref|ZP_10514945.1| GTPase Era [Bacillus mojavensis RO-H-1]
Length = 301
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QNTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V++ S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVSIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|430750565|ref|YP_007213473.1| GTP-binding protein Era [Thermobacillus composti KWC4]
gi|430734530|gb|AGA58475.1| GTP-binding protein Era [Thermobacillus composti KWC4]
Length = 315
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 146/250 (58%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+ A++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + Q++ DTPGI
Sbjct: 22 RSGFAAIVGRPNVGKSTLMNHLIGQKVAIMSDKPQTTRNKIHGVYTSDRAQIVFLDTPGI 81
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L M ++ SA D I+ LVD + D + E + K K P+ LV+
Sbjct: 82 -HKPTSKLGDFMNRSADSALAEVDVILFLVDVSEELGGGDRFIIEKL--KKTKTPVFLVM 138
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P + + Y + D EV+P+SA G+ V + D I+ LP GP YYP D
Sbjct: 139 NKIDKVHPDALLPAIAKYRELFDFAEVVPISALNGNNVGTLLDQIIRYLPEGPMYYPADQ 198
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++HPE+F E+IREKI EVP++ V + + +I+ I VE++SQK
Sbjct: 199 VTDHPEQFICAELIREKILQLTYEEVPHSIAVATEEMRVQENGVVYIRAVIYVERDSQKG 258
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 259 IIIGKHGAML 268
>gi|339010532|ref|ZP_08643102.1| GTPase Era [Brevibacillus laterosporus LMG 15441]
gi|421873899|ref|ZP_16305508.1| GTP-binding protein Era [Brevibacillus laterosporus GI-9]
gi|338772687|gb|EGP32220.1| GTPase Era [Brevibacillus laterosporus LMG 15441]
gi|372457010|emb|CCF15057.1| GTP-binding protein Era [Brevibacillus laterosporus GI-9]
Length = 305
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 152/251 (60%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL NQ++GQK++I++NKPQTTR++I + + + Q I DTPGI
Sbjct: 11 KSGFVSIIGRPNVGKSTLLNQVVGQKVAIMSNKPQTTRNQIRAVYTSDKGQFIFIDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+ + D ++ ++DA + +E + E + K P+ LV+
Sbjct: 71 HKAKSKLGDYMVAAAENTLN-EVDLVLFVIDATEKRGAGEEYILERL--KKVNTPVFLVI 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P E+ ++ Y K D +++P+SA G+ + + IL ++P GP YYP D
Sbjct: 128 NKIDQIHPEELLPLIDEYRKHHDFKQIVPISALQGNNTDALLQSILLEMPEGPMYYPADQ 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQK 352
V++HPERF V E+IREK+ R E+P++ V V K K +I I VE++SQK
Sbjct: 188 VTDHPERFIVAELIREKVLHLTREEIPHSIAVTVEEMKRGENGKTLYIYAAIYVERDSQK 247
Query: 353 IILIGKVSPFL 363
ILIGK L
Sbjct: 248 GILIGKRGDML 258
>gi|258511948|ref|YP_003185382.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478674|gb|ACV58993.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 298
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 153/253 (60%), Gaps = 4/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKSTL N ++GQK++I++N+PQTTR+RI G+ + QMI DTP
Sbjct: 2 TYKSGFVALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+ D IV++VDA ++ + + + + + P++L
Sbjct: 62 GIHKPK-HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEQEIAKQL--ERVRTPVIL 118
Query: 232 VLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LNK D ++ + K++E Y+ +E +P+SA G V+ + + I +LP GP YYP
Sbjct: 119 ALNKVDALEDRALVLKRIEEYQALRPFEEYVPISALRGEQVDLLAEIIEKRLPEGPKYYP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D++++ PE F + EI+REK+ M R+EVP++ V V + R + ++ I E+ S
Sbjct: 179 DDMITDQPESFIISEIVREKVLMLTRDEVPHSVMVAVEHMERRSSDTLYVSAVIYTERES 238
Query: 351 QKIILIGKVSPFL 363
QK ILIGK L
Sbjct: 239 QKAILIGKQGQML 251
>gi|403384164|ref|ZP_10926221.1| GTP-binding protein Era [Kurthia sp. JC30]
Length = 300
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI DTPGI
Sbjct: 5 KSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTQDDAQMIFIDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M K ++A D I+ +V+A + D+ + E + K P+ L++
Sbjct: 65 HKPK-HKLGEFMSKVSKNALREVDVIMFMVNAQQKLGAGDKYVIEML--KGTKTPVFLII 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P E+ K ++ Y++ D E++P+SA G+ V+++ + LP GP YYP D
Sbjct: 122 NKIDTIHPDEVWKIVDSYKEEYDFAEIVPISALQGNNVDNLLTTLKKYLPEGPQYYPADQ 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
V++HPERF + E+IREK R+EVP++ V + + T + + I++E++SQK
Sbjct: 182 VTDHPERFIISELIREKALHLTRDEVPHSIAVEIEKIRRDEETGRVNVNATIIIERDSQK 241
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 242 GIIIGKRGAML 252
>gi|331701380|ref|YP_004398339.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL
B-30929]
gi|406026942|ref|YP_006725774.1| GTP-binding protein era [Lactobacillus buchneri CD034]
gi|329128723|gb|AEB73276.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125431|gb|AFS00192.1| GTP-binding protein era [Lactobacillus buchneri CD034]
Length = 300
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 161/261 (61%), Gaps = 18/261 (6%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+P+ SG++A++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + E Q++ D
Sbjct: 3 NPDFHSGFIAIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTKEAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL 227
TPGI K + L MM++ SA D ++ +V+A + G GD+ D+L
Sbjct: 63 TPGI-HKPQNKLGDFMMESALSALKEVDAVLFMVNATE---------HRGAGDNFIIDQL 112
Query: 228 -----PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 282
PI L++NK D I P +I +E Y+ + +V P+SA G+ V ++ D ++ +L
Sbjct: 113 KNVDKPIYLLINKIDEISPDDIMPIIEQYKNALEFKDVYPISALQGNNVPELIDTLIKEL 172
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP YYP D V++HPERF + E+IREK+ R E+P++ V + S KT + I+
Sbjct: 173 PNGPQYYPADEVTDHPERFVISELIREKVLELTRQEIPHSTAVVIESIKTEDSLLR-IRA 231
Query: 343 EIVVEKNSQKIILIGKVSPFL 363
I+VE++ QK I+IGK L
Sbjct: 232 TIIVERDGQKGIVIGKGGSML 252
>gi|260886788|ref|ZP_05898051.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
gi|330839400|ref|YP_004413980.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
gi|260863387|gb|EEX77887.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
gi|329747164|gb|AEC00521.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185]
Length = 297
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 149/252 (59%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
H+SG++AV+G+PNVGKSTL N +IGQK+ I+++KPQTTR RIL I + P+ Q++ DTP
Sbjct: 5 KHRSGFIAVVGRPNVGKSTLINSLIGQKIVIMSDKPQTTRTRILCILTEPDAQIVFLDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K H L M++ S D + +VDA + + + E + K P +L
Sbjct: 65 GI-HKPRHTLGEYMVRAAESTLKEVDAVFFVVDATEKMGPGERYILERL--QATKCPCIL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DLI+ + LE Y K +P+SAK ++ + + LP GPAYYP+
Sbjct: 122 VVNKLDLIEKPVVLPILESYMKAYPFAGAVPISAKEEVNLDSLLAEVKKYLPEGPAYYPE 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D+V++ PER V E++REK + R+E+P+A V++ K RP +I+ I VE+ SQ
Sbjct: 182 DMVTDQPERLIVAELVREKALLATRDELPHAMAVDLDEMKERPKGGFYIRATIYVERESQ 241
Query: 352 KIILIGKVSPFL 363
K I+IG L
Sbjct: 242 KGIVIGAKGALL 253
>gi|325106043|ref|YP_004275697.1| GTP-binding protein Era [Pedobacter saltans DSM 12145]
gi|324974891|gb|ADY53875.1| GTP-binding protein Era [Pedobacter saltans DSM 12145]
Length = 292
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 161/248 (64%), Gaps = 10/248 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V+++GKPN GKSTL N ++G+K++I+T+K QTTRHRI+GI + +YQ++ DTP
Sbjct: 2 SHKAGFVSIVGKPNAGKSTLMNTLVGEKMAIITSKAQTTRHRIIGIVNEEDYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L MM V+ + ++AD ++ + D + + D +L++ G +L+
Sbjct: 62 GII-KPAYKLQESMMDAVQGSLVDADILLFVTDINEKHDEQD-VLDKIKG---STAKLLV 116
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK D ++ +K+ ++ + D ++ +SA + + VE I +I LP P YY K
Sbjct: 117 LINKIDESTQEKVEEKINYWRDKLNPDGIVGISALHNYNVEQIMGFIKDNLPEHPPYYDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKN 349
D ++ ERFFV E+IREKIF Y+ E+PY+ +V V S+K +K+ I++ E+VVE+
Sbjct: 177 DELTTRSERFFVSEMIREKIFKFYKKEIPYSTEVLVTSFK---ESKNLIKISAEVVVERE 233
Query: 350 SQKIILIG 357
SQK ILIG
Sbjct: 234 SQKNILIG 241
>gi|157693029|ref|YP_001487491.1| GTP-binding protein Era [Bacillus pumilus SAFR-032]
gi|157681787|gb|ABV62931.1| GTPase [Bacillus pumilus SAFR-032]
Length = 301
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNSSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAKEGYGKGDEFIIERL--KQTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P E+ ++ Y E++P+SA G+ ++ + + LP GP +
Sbjct: 119 VFLVVNKIDQIHPDELFLLIDEYRTRYPFKEIVPISALEGNNIDTLLQQVEGYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K K + IVVE+
Sbjct: 179 YPADQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKPDENGKIHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKRGSLL 253
>gi|429742024|ref|ZP_19275671.1| ribosome biogenesis GTPase Era [Porphyromonas catoniae F0037]
gi|429157665|gb|EKY00246.1| ribosome biogenesis GTPase Era [Porphyromonas catoniae F0037]
Length = 301
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 153/247 (61%), Gaps = 5/247 (2%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P H+SG+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DT
Sbjct: 8 PQHRSGFVNIVGNPNVGKSTLMNLLVGERVSIITSKAQTTRHRIMGIVNTPELQIVYSDT 67
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PG++ + +SM+ + + G +AD ++ + D + ++ + L G K P++
Sbjct: 68 PGVLRPSYKLQESMLEFSESALG-DADVLLYVTDTVETADKNEFFLNRVRG---IKCPLI 123
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK DL + +E + K E+IP+SA VE +R I + +P P Y+
Sbjct: 124 LIINKVDLTNEEALVALVERWHKELPEAEIIPLSALNNFNVEALRRRIESLIPPSPPYFD 183
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ P RFFV EIIREK+ + Y+ E+PY+ +V V +++ + IQ IV E+ S
Sbjct: 184 KDALTDKPARFFVTEIIREKVLLYYQKEIPYSVEVVVETFREE-ADRIHIQALIVAERES 242
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 243 QKGIIIG 249
>gi|374385578|ref|ZP_09643081.1| GTP-binding protein Era [Odoribacter laneus YIT 12061]
gi|373225280|gb|EHP47614.1| GTP-binding protein Era [Odoribacter laneus YIT 12061]
Length = 293
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 153/247 (61%), Gaps = 5/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
NHKSG+V ++G PNVGKSTL N+++G+K+SI+T+K QTTRHRI GI + +Q++ DTP
Sbjct: 2 NHKSGFVNIIGNPNVGKSTLMNRLVGEKISIITSKSQTTRHRIKGIVNDENFQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G++ K + + M++ +SA +AD I+ + D + + ++ +E+ + PILL
Sbjct: 62 GVV-KPSYKMQECMLEFSKSALTDADIILYVTDVVEDMLKNNDFIEQV---KRSAAPILL 117
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK DL ++ + ++ E+ PVSA V+ + IL LP G ++PK
Sbjct: 118 VINKIDLTTQEKLEDLFDKWKSLLPQAEIFPVSATENFNVDHLYQRILELLPEGEPFFPK 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P RFFV EIIREKI + Y E+PY+ +V V +K + + V I VE++SQ
Sbjct: 178 DELTDLPARFFVNEIIREKILLNYEREIPYSVEVAVEEFKEDAKRINIMAV-IYVERDSQ 236
Query: 352 KIILIGK 358
K I+IG+
Sbjct: 237 KGIIIGR 243
>gi|193213835|ref|YP_001995034.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110]
gi|193087312|gb|ACF12587.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110]
Length = 321
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 155/257 (60%), Gaps = 19/257 (7%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
K+G+ +LG+PN GKSTL N ++G+K+SIVT KPQTTR R+LGI + Q++L DTPGI
Sbjct: 23 KAGFATILGEPNAGKSTLLNVLLGEKISIVTPKPQTTRKRVLGIFTDKSCQIVLLDTPGI 82
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA-----CKAPERIDEILEEGVGDHKDKLP 228
++ K + ++M+ +S ++D +V+L+D KA + D + K P
Sbjct: 83 MKPKYKLHEAMLDLADKSVE-DSDVLVLLLDVEKYQKGKAELKADLAFQRIANTKK---P 138
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTD---VDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
++LVLNK DLI LE KF+ E++P+SA G+ + + ++ LP
Sbjct: 139 VILVLNKVDLITKDA---SLELIAKFSSEYPFREIVPLSALKGYNIREFLKAVVPYLPAS 195
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV----VSYKTRPTAKDFIQ 341
P YP DI+S PERFFV EIIREKIF + E+PY+ +V+V +Y+ P KD ++
Sbjct: 196 PPLYPPDILSTAPERFFVSEIIREKIFQFFSQEIPYSTEVDVEEFQENYEKNPARKDVLR 255
Query: 342 VEIVVEKNSQKIILIGK 358
IVV++ SQK ILIGK
Sbjct: 256 CAIVVDRLSQKSILIGK 272
>gi|374290149|ref|YP_005037202.1| GTP-binding protein Era [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358376941|gb|AEU09129.1| GTP-binding protein Era [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 301
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 158/252 (62%), Gaps = 10/252 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+ +SI+TNKPQTTRHRILGI +YQ+I DTPG
Sbjct: 6 HKSGFVNIIGFPNVGKSTLMNSLVGENISIITNKPQTTRHRILGIIDQYDYQIIFSDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I+ K I+ + +MM+ V+ + +AD I+ + K +++ L + K+PIL++
Sbjct: 66 IMIKPIYSMQKIMMQYVKKSFKDADIILFTTEIGKF-NLLNKYLSFLKFLKEQKIPILIL 124
Query: 233 LNKKDLI----KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+NK D I + + ++ F E++P+SA + + + IL L GP Y
Sbjct: 125 INKIDKIGVVYSENMLYDTINYWNNFFPNSEILPISALKNINQDLLLNKILDLLSKGPPY 184
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVV 346
YPK I+S+ ERFFV EIIREKIF+ Y+ E+PY+ +++ +K K+ I ++ I V
Sbjct: 185 YPKGILSDRSERFFVNEIIREKIFLMYKKEIPYSVEISTEKFK---NGKNSIHIDSSIYV 241
Query: 347 EKNSQKIILIGK 358
E++SQK ILIGK
Sbjct: 242 ERDSQKGILIGK 253
>gi|163791428|ref|ZP_02185837.1| GTP-binding protein Era [Carnobacterium sp. AT7]
gi|159873292|gb|EDP67387.1| GTP-binding protein Era [Carnobacterium sp. AT7]
Length = 299
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 4 HKSGFVSIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTTPESQIVFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+ + SA D I+ +V+ + D + E + K P+ LV
Sbjct: 64 IHKPK-HRLGDFMVDSAFSAFREVDVILFMVNIAEKRGPGDNFIMERLKTVKS--PVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D I P ++ +E Y D ++VIP+SA G+ VE + + LP GP +YP D
Sbjct: 121 LNKIDKIHPDQLLPIIEDYRSLVDFEQVIPISAADGNNVETLLSEVTKYLPEGPQFYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
V++HPE F V E+IREK+ R EVP++ V V S + K + I+VE++SQ
Sbjct: 181 QVTDHPEYFIVSELIREKVLELTREEVPHSVAVVVESMQRNELGKVQVHAAIIVERSSQ 239
>gi|430758713|ref|YP_007208930.1| GTP-binding protein Bex [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|430023233|gb|AGA23839.1| GTP-binding protein Bex [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 301
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y K E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D +++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQITDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|384176153|ref|YP_005557538.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595377|gb|AEP91564.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 301
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y + E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRRRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|389571827|ref|ZP_10161915.1| GTP-binding protein Era [Bacillus sp. M 2-6]
gi|407978478|ref|ZP_11159309.1| GTPase Era [Bacillus sp. HYC-10]
gi|388428313|gb|EIL86110.1| GTP-binding protein Era [Bacillus sp. M 2-6]
gi|407415036|gb|EKF36652.1| GTPase Era [Bacillus sp. HYC-10]
Length = 301
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MM+ ++ D I+ +++A + + DE + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMRVAQNTLKEVDLILFMINAQEGYGKGDEFIIERL--KQTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P E+ ++ Y E++P+SA G+ ++ + I LP GP +
Sbjct: 119 VFLVVNKIDQIHPDELFLLIDEYRTRYPFKEIVPISALEGNNIDTLLQQIEGYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K K + IVVE+
Sbjct: 179 YPADQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKPDENGKIHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKRGSLL 253
>gi|365853627|ref|ZP_09393894.1| ribosome biogenesis GTPase Era [Lactobacillus parafarraginis F0439]
gi|363712252|gb|EHL95951.1| ribosome biogenesis GTPase Era [Lactobacillus parafarraginis F0439]
Length = 300
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 158/254 (62%), Gaps = 4/254 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN++SG+VA++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + + Q++ D
Sbjct: 3 NPNYRSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPGI K + L MM + SA D ++ +V+A + D + + + + DK PI
Sbjct: 63 TPGI-HKPQNKLGDFMMDSALSALREVDAVLFMVNATERRGAGDNFIIKQL-QNVDK-PI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L++NK D I P ++ +E Y+ EV P+SA G+ V ++ + +LP GP YY
Sbjct: 120 YLLINKIDEISPDDVMAIIEQYKDALPFKEVFPISALQGNNVPELISSLTNELPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
PKD V++HPERF + E+IREK+ R E+P++ V + S K + IQ I+VE++
Sbjct: 180 PKDQVTDHPERFVISELIREKVLQMTRQEIPHSTAVYIESIKKQDELLR-IQATIIVERD 238
Query: 350 SQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 239 GQKAIVIGKGGSML 252
>gi|404451047|ref|ZP_11016021.1| GTPase Era [Indibacter alkaliphilus LW1]
gi|403763340|gb|EJZ24308.1| GTPase Era [Indibacter alkaliphilus LW1]
Length = 296
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 159/251 (63%), Gaps = 7/251 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ HK+G+V ++GKPNVGKSTL N +IG++LSI+++K QTTRHRI+GI + YQ++
Sbjct: 2 TEQTHKAGFVNIVGKPNVGKSTLMNVLIGERLSIISSKAQTTRHRIMGIINDDAYQIVFS 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+++ K + L MM V + +AD I+ + D + I++++E+ ++ +P
Sbjct: 62 DTPGMLKPK-YELHKNMMGFVNMSLEDADVILFVTDLFETDAEIEDVIEK---INQSGVP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL K ++ + ++ + + VIP+SA E I IL +LP P +
Sbjct: 118 VLLVINKIDLSKENQLEEVTAYWTQRIKAETVIPISATESFNTERILIEILERLPQHPPF 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVS-YKTRPTAKDFIQVEIVVE 347
Y K+ +++ PERFF EI+REKIF+ Y+ E+PY+ +V + Y+ + ++ I VE
Sbjct: 178 YDKEELTDKPERFFASEIVREKIFLNYKKEIPYSTEVAIEDFYEDEKIIR--VRAIIYVE 235
Query: 348 KNSQKIILIGK 358
+ SQK I+IG+
Sbjct: 236 RKSQKGIIIGE 246
>gi|312110184|ref|YP_003988500.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1]
gi|336234648|ref|YP_004587264.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93]
gi|423719218|ref|ZP_17693400.1| GTP-binding protein era [Geobacillus thermoglucosidans TNO-09.020]
gi|311215285|gb|ADP73889.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1]
gi|335361503|gb|AEH47183.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93]
gi|383368121|gb|EID45396.1| GTP-binding protein era [Geobacillus thermoglucosidans TNO-09.020]
Length = 302
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTPG
Sbjct: 6 YKSGFVSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ + K H L MMK +A D I+ +++A + R D + E + + P+ LV
Sbjct: 66 MHKPK-HKLGDFMMKVALNALKEVDLILFMINAEEGFGRGDAYIIERLKEVNT--PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL+ P ++ ++ Y++ E+IP+SA G+ +E + + I LP GP YYP D
Sbjct: 123 INKIDLVHPNDLLPLIDRYKELYPFAEIIPISALQGNNIETLVEQIKKYLPEGPQYYPPD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQ 351
V++HPERF + E+IREK R EVP++ V V + + R + ++ I+VE++SQ
Sbjct: 183 QVTDHPERFIIAELIREKALHLTREEVPHSIAVVVETIERREDSDTVYVGAVIIVERDSQ 242
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 243 KGIIIGK 249
>gi|347534452|ref|YP_004841122.1| GTP-binding protein Era [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504508|gb|AEN99190.1| GTP-binding protein era-like protein [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 303
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 154/259 (59%), Gaps = 17/259 (6%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+VA++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + + Q++ DTP
Sbjct: 6 NFKSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTKDAQIVFLDTP 65
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------K 224
GI K + LD M + S+ + ++ +V A + G GD+ K
Sbjct: 66 GI-HKPENKLDEYMDASALSSLREVEAVLFMVSATET---------RGAGDNYIIDQLKK 115
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
+P+ L++NK D I P ++ ++ Y K D EV P+SA G+ V+++ ++ LP
Sbjct: 116 VDVPVYLIINKIDEINPDKLLVIMDTYRKAYDWAEVFPISALRGNNVDELIGNLIDHLPE 175
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP D V++HPERF V EI+REKI R E+P++ V V S KT K I+ I
Sbjct: 176 GPQYYPDDQVTDHPERFIVQEIVREKILENTRQEIPHSVAVYVESMKTNENGKVQIEASI 235
Query: 345 VVEKNSQKIILIGKVSPFL 363
+V++ QK I+IGK L
Sbjct: 236 IVDREGQKRIIIGKGGALL 254
>gi|89891790|ref|ZP_01203292.1| GTP-binding protein [Flavobacteria bacterium BBFL7]
gi|89515945|gb|EAS18610.1| GTP-binding protein [Flavobacteria bacterium BBFL7]
Length = 300
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 162/247 (65%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI +G ++Q++L DTPG
Sbjct: 7 HKAGFVNIVGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L MM+ V++A +ADCI+ +V+ + E +E E+ + ++P++++
Sbjct: 67 II-KPAYKLQESMMEFVKNAFEDADCILYMVELGEK-ELKNEAFEKRLT--YAEVPVIVL 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + ++ + +E ++ E+ +SA GV + I+ LP PA+YPKD
Sbjct: 123 INKIDKGQASQLEEAVEHWKVRLPNAEIFAISALENFGVPQLMARIVEILPASPAFYPKD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV E IREKI + Y+ E+PY+ +++ + +D I++ I+VE+ +
Sbjct: 183 ALTDKPERFFVNESIREKILIHYKKEIPYSVEIDTEEF---FEDEDIIRIRSVIMVERET 239
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 240 QKGIIIG 246
>gi|376316033|emb|CCF99436.1| GTP-binding protein Era-like-protein [uncultured Flavobacteriia
bacterium]
Length = 294
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 154/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+KLSI+T K QTTRHRILGI +G E+Q+I DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNALVGEKLSIITAKAQTTRHRILGIVNGDEHQIIFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I++ + +S MM V+SA +AD ++ +V+ + + + + + K+P++L+
Sbjct: 63 ILQPAYQLQES-MMDFVKSAFDDADILIYMVEIGEKELKNEAFFKRIIN---SKIPVILL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ +K+ +++ +SA V+ + + I+ LP GPA+YPKD
Sbjct: 119 INKIDKSTQEEVEEKVNYWQTKVPNSFTYVISALEKFNVDTVFNKIIELLPEGPAFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI Y+ E+PY+ +V S+ T I+ I+VE+ +QK
Sbjct: 179 QLTDKPERFFVNEKIREKILTHYKKEIPYSVEVETESFVEEETIIR-IRSVIMVERETQK 237
Query: 353 IILIG 357
I+IG
Sbjct: 238 GIIIG 242
>gi|257865833|ref|ZP_05645486.1| GTP-binding protein Era [Enterococcus casseliflavus EC30]
gi|257872168|ref|ZP_05651821.1| GTP-binding protein Era [Enterococcus casseliflavus EC10]
gi|257875461|ref|ZP_05655114.1| GTP-binding protein Era [Enterococcus casseliflavus EC20]
gi|325569848|ref|ZP_08145842.1| GTP-binding protein Era [Enterococcus casseliflavus ATCC 12755]
gi|257799767|gb|EEV28819.1| GTP-binding protein Era [Enterococcus casseliflavus EC30]
gi|257806332|gb|EEV35154.1| GTP-binding protein Era [Enterococcus casseliflavus EC10]
gi|257809627|gb|EEV38447.1| GTP-binding protein Era [Enterococcus casseliflavus EC20]
gi|325156971|gb|EGC69139.1| GTP-binding protein Era [Enterococcus casseliflavus ATCC 12755]
Length = 299
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 151/240 (62%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q+I DTP
Sbjct: 3 THKSGFVAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQLIFIDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M++ SA D + ++ A + + D+ + E + + + P+ L
Sbjct: 63 GIHKPK-HRLGDFMVETAYSALREVDVTLFMISADQKRGKGDDFIIERL--RQSQTPVFL 119
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P + +E Y D E++P+SA G+ E + ++ ++P GP Y+P+
Sbjct: 120 VINKIDKVHPDALLAIIEDYSSQMDFAEIVPISATEGNNFETLMKLLIDEMPEGPQYFPE 179
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPE F V E++REK+ + R+EVP++ V V S K K IQ I+VE++SQ
Sbjct: 180 DQITDHPEYFIVSELVREKVLLLTRDEVPHSVAVVVDSMKRDHNDKVHIQATIIVERDSQ 239
>gi|332638283|ref|ZP_08417146.1| GTPase Era [Weissella cibaria KACC 11862]
Length = 302
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 154/250 (61%), Gaps = 3/250 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG+VA++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E Q++
Sbjct: 2 SEQGFKSGFVALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTDEGQIVFM 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+K SA AD + LV+A + D+ + + D K P
Sbjct: 62 DTPGI-HKPHNSLGDFMVKTAMSALREADMVWFLVNADEPRGAGDDFIINRLKDTK--TP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK DL+ P ++ ++ Y + + E+ P+SA G GV ++ D+ + K+ GP Y
Sbjct: 119 VYLIINKIDLVNPADLLTIIDDYRQQMEFAEIFPISALKGDGVPELLDFAMDKMAEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D +++HPERF + E+IREK+ R EVP++ V + + + +Q IVVE+
Sbjct: 179 YPADQITDHPERFIMSELIREKVLQLTRQEVPHSVAVVIDKIERQDENHLHVQATIVVER 238
Query: 349 NSQKIILIGK 358
+QK I+IGK
Sbjct: 239 PTQKNIVIGK 248
>gi|239618466|ref|YP_002941788.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1]
gi|239507297|gb|ACR80784.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1]
Length = 305
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 161/249 (64%), Gaps = 5/249 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+++SG V+++GKPNVGKS+L NQ++G+K++IV++K QTTR+RI GI + Q+I YDTP
Sbjct: 6 DYRSGIVSLVGKPNVGKSSLVNQLVGEKVAIVSDKVQTTRNRIGGIVTTERGQVIFYDTP 65
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K +H L ++K SA +D I ++D ++ D ++ + V + +P+ L
Sbjct: 66 GI-HKPLHKLGGYLVKITVSALNGSDLIAAILDISDGIKKSDFLVAKHV--NSSNIPVFL 122
Query: 232 VLNKKDLIKP-GEIAKKLEWYEK-FTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
V+NK D++K +I + LE K F +V++ PVSA G G+++ + ++ ++P GP Y
Sbjct: 123 VINKIDVVKTRKKITEFLEEGTKLFKNVEKTFPVSAITGEGIKEFLEAVIERMPPGPPLY 182
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+D++++ RF EIIREKI + + EVP++ V++ + R +I+ EIVVE+
Sbjct: 183 PEDVITDRSARFMASEIIREKILLLTKEEVPHSVGVSIEEFTYRENGTLYIRGEIVVERP 242
Query: 350 SQKIILIGK 358
+QK I+IGK
Sbjct: 243 TQKAIIIGK 251
>gi|341820912|emb|CCC57231.1| GTP-binding protein Era [Weissella thailandensis fsh4-2]
Length = 302
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 151/257 (58%), Gaps = 17/257 (6%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG++A++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E QM+
Sbjct: 2 SEQEFKSGFIALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTNEGQMVFM 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD------ 222
DTPGI K + L M+K SA +D + +LV+A + E GVGD
Sbjct: 62 DTPGI-HKPHNSLGDYMVKTAMSALRESDMVWLLVNADQ---------ERGVGDDFIINR 111
Query: 223 -HKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
+ P+ L++NK DLI E+ ++ Y D E+ P+SA G GV ++ + +
Sbjct: 112 LKESNTPVYLIINKVDLIDRAEVLNQIADYNAQMDFAEIFPISALTGEGVPELLRFTMDH 171
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+ GP YYP+D +++HPERF + E+IREK+ R EVP++ V + K +Q
Sbjct: 172 MAAGPQYYPEDQLTDHPERFIMSELIREKVLELTRQEVPHSVAVVIDKIAREDEQKLHVQ 231
Query: 342 VEIVVEKNSQKIILIGK 358
IVVE+ SQK I+IGK
Sbjct: 232 ATIVVERPSQKNIIIGK 248
>gi|350266730|ref|YP_004878037.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599617|gb|AEP87405.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 301
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKLQNMST--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLTQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|194017708|ref|ZP_03056318.1| GTP-binding protein Era [Bacillus pumilus ATCC 7061]
gi|194010608|gb|EDW20180.1| GTP-binding protein Era [Bacillus pumilus ATCC 7061]
Length = 301
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 154/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK + D I+ +++A + + DE + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVATNTLKEVDLILFMINAKEGYGKGDEFIIERL--KQTSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P E+ ++ Y E++P+SA G+ ++ + + LP GP +
Sbjct: 119 VFLVVNKIDQIHPDELFLLIDEYRTRYPFKEIVPISALEGNNIDTLLQQVEGYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K K + IVVE+
Sbjct: 179 YPADQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKPDENGKIHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKRGSLL 253
>gi|409351175|ref|ZP_11234003.1| GTP-binding protein Era [Lactobacillus equicursoris CIP 110162]
gi|407876934|emb|CCK86061.1| GTP-binding protein Era [Lactobacillus equicursoris CIP 110162]
Length = 301
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 150/247 (60%), Gaps = 6/247 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q + DTPG
Sbjct: 7 HKSGFVALIGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKIFGIYTEDDMQAVFVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPILL 231
I K LD M K SA + D ++ +VDA KA + + + G K+ ++P+ L
Sbjct: 67 IF-KSHSDLDEYMDKASLSALNDVDLVLFMVDAKKAGKGEEYV----AGLLKNVEVPVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P ++ ++ Y+ D DE +P+SA G+GV+D+ I LP GP YY
Sbjct: 122 VINKIDQVHPNDLLPIIDSYQAVGDFDEFLPISASQGNGVDDLLKTIKDYLPEGPQYYAS 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V++ PE F V E+IRE+I EVP++ V V R K + I VEK+ Q
Sbjct: 182 DEVTDRPEYFVVAEMIREQILRLTGQEVPHSTAVWVEQMNERINGKLQVNATIYVEKDGQ 241
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 242 KRIIIGK 248
>gi|420262413|ref|ZP_14765054.1| GTP-binding protein Era [Enterococcus sp. C1]
gi|394770170|gb|EJF49974.1| GTP-binding protein Era [Enterococcus sp. C1]
Length = 299
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 151/240 (62%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q+I DTP
Sbjct: 3 THKSGFVAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQLIFIDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M++ SA D + ++ A + + D+ + E + + + P+ L
Sbjct: 63 GIHKPK-HRLGDFMVETAYSALREVDVTLFMISADQKRGKGDDFIIERL--RQSQTPVFL 119
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P + +E Y D E++P+SA G+ E + ++ ++P GP Y+P+
Sbjct: 120 VINKIDKVHPDALLAIIEDYSSQMDFAEIVPISATEGNNFETLMKLLVDEMPEGPQYFPE 179
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPE F V E++REK+ + R+EVP++ V V S K K IQ I+VE++SQ
Sbjct: 180 DQITDHPEYFIVSELVREKVLLLTRDEVPHSVAVVVDSMKRDHNDKVHIQATIIVERDSQ 239
>gi|330752593|emb|CBL87539.1| GTP-binding protein era homolog [uncultured Flavobacteriia
bacterium]
Length = 295
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HKSG+V+++G PNVGKST N ++G +SIVT K QTTRHRILGI +G +Q++ DTP
Sbjct: 6 DHKSGFVSIIGNPNVGKSTFMNALLGLDISIVTPKAQTTRHRILGIVNGHNFQVVFSDTP 65
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII+ M +S MM V+ A +AD I+ +V A + ++L + K K P+ +
Sbjct: 66 GIIKPSYEMQNS-MMNFVKDALKDADIIIYMVTAKDENLKDQKLLNQ---IKKTKSPLFV 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK D + KK+ +++ + V P+SA G + ++ + I +P PAY+PK
Sbjct: 122 LINKIDKSTQKLVEKKVSYWKTIFPLANVYPISALNGFFISEVFNSIKELIPNSPAYFPK 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFFV E IR++I +Y+NE+PY+ +V +K P V I+VE+ SQ
Sbjct: 182 DQITDKPERFFVNESIRKQILQRYKNEIPYSVEVITEEFKESPKIIKINSV-IIVERESQ 240
Query: 352 KIILIG 357
K I+IG
Sbjct: 241 KGIIIG 246
>gi|386759126|ref|YP_006232342.1| hypothetical protein MY9_2553 [Bacillus sp. JS]
gi|384932408|gb|AFI29086.1| Era [Bacillus sp. JS]
Length = 301
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QQMSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|375085630|ref|ZP_09732262.1| GTP-binding protein Era [Megamonas funiformis YIT 11815]
gi|374567041|gb|EHR38273.1| GTP-binding protein Era [Megamonas funiformis YIT 11815]
Length = 298
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 149/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +IGQK++I+++KPQTTR++I+ + + Q+I DTPGI
Sbjct: 7 KSGFVAVIGRPNVGKSTLINSLIGQKIAIMSDKPQTTRNKIMCVLTTDNEQVIFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K +H L M+K D I+ +VDA + + + E + K P++L++
Sbjct: 67 -HKPLHKLGEYMVKAAEGTLKEVDAILFVVDATEDLGGGERYIMERL--QATKKPVILIV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI + +E Y K D V+P+SAK ++ + + LP GP YYP D
Sbjct: 124 NKLDLIDRQSVLPIIEKYTKAYDFAGVVPISAKEKMNLDSLLAELNKYLPEGPQYYPADT 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++ PER E+IREK+ R+E+P+A V++ K+R K +I+ I VE+ SQK
Sbjct: 184 VTDQPERLIAAEMIREKVLHLTRDEIPHAIAVDIEEMKSRANDKVYIRATIYVERESQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IVIGKRGALL 253
>gi|224476675|ref|YP_002634281.1| GTP-binding protein Era [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254783663|sp|B9DNL3.1|ERA_STACT RecName: Full=GTPase Era
gi|222421282|emb|CAL28096.1| putative GTP-binding protein Era [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 299
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 153/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKST N+++G K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVAIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIHGVMTEDDAQIIFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D ++ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLTEVDAVIFMVNANEEIGRGDEYIMEMLKN--IKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL+ P +I +E YEK E +P+SA G V+ + + + +P GP YYP
Sbjct: 121 INKIDLVHPDQIMPIIESYEKHMHFTEAVPMSALEGLNVDHFINVLKSYMPEGPQYYPDG 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V E+IREK+ E+P++ VNV + + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSELIREKVLHLTSEEIPHSIGVNVDRMVKQSEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>gi|387792311|ref|YP_006257376.1| GTP-binding protein Era [Solitalea canadensis DSM 3403]
gi|379655144|gb|AFD08200.1| GTP-binding protein Era [Solitalea canadensis DSM 3403]
Length = 292
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 156/246 (63%), Gaps = 6/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V+++GKPN GKSTL N ++G+++SI+T+K QTTRHRI+GI + + Q+I DTPG
Sbjct: 3 HKAGFVSIVGKPNAGKSTLMNILVGERMSIITHKAQTTRHRIIGIINDEDTQIIFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+I+ K + L MM V + ++AD ++V+ D + + D I E V ++ P+ ++
Sbjct: 63 MIQPK-YGLQKSMMSAVNESFLDADVLLVVTDINEKHDEADLI--EKVKKYEG--PVAVL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + K E+++K + +IP+SA ++ I +I LP+ P YY K+
Sbjct: 118 INKVDQSNQELVTAKFEYWQKELNPAAIIPISALKEFNIDAITSFIRANLPVHPPYYDKE 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ ERFFV EIIRE+IF EVPY+ +V +VS+K D I EI+VE+ +QK
Sbjct: 178 ELTDRSERFFVSEIIREQIFKCCEKEVPYSSEVVIVSFKEGEDI-DRISAEIIVERETQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 AIIIGK 242
>gi|228472569|ref|ZP_04057329.1| GTP-binding protein Era [Capnocytophaga gingivalis ATCC 33624]
gi|228275982|gb|EEK14738.1| GTP-binding protein Era [Capnocytophaga gingivalis ATCC 33624]
Length = 293
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 156/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRI GI SG ++Q++ DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLLNALVGERLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+ A +AD ++ +V+ + + + + ++ K+P+L++
Sbjct: 63 II-KPAYQLQNSMMDFVKDAFEDADILIYMVEIGEKELKDADFFRK---INQAKVPVLVL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + + ++++ E+ +SA V + IL LP+ PA+YPKD
Sbjct: 119 INKIDRSDEETVKQAVAYWQQQVPKGEIYAISALENFNVAPLFHRILELLPVSPAFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ PERFFV E IREKI + Y+ EVPYA +V +T + I++ I+VE++S
Sbjct: 179 QLTDKPERFFVNETIREKILLNYKKEVPYAVEVET---ETFSETDEIIRIRSIIMVERDS 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|375254264|ref|YP_005013431.1| ribosome biogenesis GTPase Era [Tannerella forsythia ATCC 43037]
gi|363406165|gb|AEW19851.1| ribosome biogenesis GTPase Era [Tannerella forsythia ATCC 43037]
Length = 297
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL NQ++G+++SI+T+K QTTRHRILGI + Q++ DTPG
Sbjct: 6 HKSGFVNIIGNPNVGKSTLMNQLVGERISIITSKAQTTRHRILGIVNTDNMQIVYSDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + L M ++ SA +AD ++ + D + ++ D+ L+ + K P+LL+
Sbjct: 66 VLRPN-YKLQETMRESSESALGDADVLLYVTDVIEKTDKNDDFLQRV---RQAKCPVLLL 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ +E + E+IP+SA +E ++ I +P P Y+ KD
Sbjct: 122 INKIDLADQPKLETLVEEWHALLPEAEIIPISATSKFNIEPLKKRIRELIPDSPPYFEKD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V + PT I+ I+VE+ +QK
Sbjct: 182 ALTDRPARFFVTEIIREKILLYYQKEIPYATEVVVEQFIEEPTCV-HIKALIIVERETQK 240
Query: 353 IILIG 357
I+IG
Sbjct: 241 GIIIG 245
>gi|429747606|ref|ZP_19280862.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429162738|gb|EKY05029.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 293
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 155/247 (62%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+ +K QTTRHRI GI S ++Q++ DTPG
Sbjct: 2 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIIPSKAQTTRHRIFGIVSSDDFQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PIL 230
II K + L + MM V+SA +AD ++ +V+ + E+ +E ++L P+L
Sbjct: 62 II-KPSYALQASMMDFVKSAFEDADILIYMVEIGEK-----ELKDEAFFKRINQLDVPVL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + +++ ++++ E+ P+SA E + + I+ LP PA++P
Sbjct: 116 LLINKVDTSDQSVLEEQVAYWKEKVPRTEIYPISALRNFQTEVVFNRIIELLPESPAFFP 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI + Y+ E+PY+ +V S+ A I+ I+VE+ S
Sbjct: 176 KDQLTDKPERFFVNEIIREKILLHYKKEIPYSVEVETESF-ADSEAIIHIRSVIMVERES 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|374853188|dbj|BAL56103.1| GTP-binding protein Era [uncultured Acidobacteria bacterium]
Length = 302
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 152/252 (60%), Gaps = 5/252 (1%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A+ KSG+VA++G+PNVGKSTL N++IGQK++ V++KPQTTR RI GI + PE Q+I
Sbjct: 5 AAERVTKSGFVALIGRPNVGKSTLLNRLIGQKIAAVSDKPQTTRWRIRGILTRPEGQIIF 64
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPG I K IH ++ MM+ V +A + D ++++ D ++ D + E V +
Sbjct: 65 VDTPG-IHKPIHRMNERMMRAVEAAIADVDLLLLMTDVTESFGSGDRFVLEMV--KRAGK 121
Query: 228 PILLVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P L+LNK D +K ++ ++ Y + D E +P+SA G GV+ + + LP GP
Sbjct: 122 PTFLLLNKIDRLKDKRQLLPLIDRYRREYDFVEYLPISALTGEGVDLLLQSLFEHLPEGP 181
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YYP+ +++ PER V EI+REK+ M R E+PY V S+K I I+V
Sbjct: 182 LYYPEGEITDQPERVLVAEIVREKLLMVTREEIPYVTAVYTESFKEE-NGLLRIHCVILV 240
Query: 347 EKNSQKIILIGK 358
E+ SQK I+IGK
Sbjct: 241 ERESQKPIIIGK 252
>gi|398306987|ref|ZP_10510573.1| GTPase Era [Bacillus vallismortis DV1-F-3]
Length = 301
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDMILFMINAEEGYGKGDEFIIEKLQNLST--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRGRYPFKEIVPISALEGNNIETLLTQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>gi|403379079|ref|ZP_10921136.1| GTPase Era [Paenibacillus sp. JC66]
Length = 299
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 146/251 (58%), Gaps = 3/251 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++SG+VA++G+PNVGKSTL NQ+IGQK++I++NKPQTTR++I G+ + Q++ DTPG
Sbjct: 6 YRSGFVAIIGRPNVGKSTLLNQVIGQKIAIMSNKPQTTRNKIHGVYTTENCQIVFLDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K L MMK D I+ LVDA + D + E + + K P++LV
Sbjct: 66 I-HKPQSRLGDYMMKVAEGTLREVDAILFLVDAAEGIGGGDRFIIERL--KQVKTPVILV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + P E+ + Y+ E+IP+SA G+ V + D + L GP YYP D
Sbjct: 123 LNKIDQVHPEELLPVIASYKDLYPFSEIIPISALLGNNVNSLLDTLTGYLEEGPQYYPAD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPE+F E+IREKI R E+P++ V + K I I VE++SQK
Sbjct: 183 QITDHPEQFVCAELIREKILHLTREEIPHSIAVTIEDMKREANDVVHISAVIYVERDSQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKRGALL 253
>gi|294675552|ref|YP_003576168.1| GTP-binding protein Era [Prevotella ruminicola 23]
gi|294472154|gb|ADE81543.1| GTP-binding protein Era [Prevotella ruminicola 23]
Length = 295
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 154/247 (62%), Gaps = 7/247 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + PE+ + L + K +P+LL+
Sbjct: 62 VLKPNYKLQESMLAFS-ESALQDADVLLYVTDVVENPEKNMDFLAKV---QKLDMPVLLL 117
Query: 233 LNKKDLIKPG--EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+NK D + G ++A +E + E++P+SAK GV+ + I LP PAY+
Sbjct: 118 INKIDELTGGNAQLAAIVEKWHALLPKAEILPISAKNKFGVDMLLKRIQELLPESPAYFD 177
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ P RFFV EIIREKI + Y E+PY+ +V V +K I I VE++S
Sbjct: 178 KDQLTDKPARFFVSEIIREKILLYYDKEIPYSVEVAVERFK-EDDKHIHINAIIYVERDS 236
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 237 QKGIIIG 243
>gi|296115042|ref|ZP_06833684.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769]
gi|295978379|gb|EFG85115.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769]
Length = 302
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 143/246 (58%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI QM+L DTPGI
Sbjct: 10 RCGFVAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRNHAQMLLVDTPGI 69
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA-CKAPERIDEILEEGVGDHKDKLPILLV 232
+ MLD M+ + +AD ++++DA E + EI+ + ++ + LV
Sbjct: 70 FRPR-RMLDRAMVAAAWTGAEDADITLLIIDARAGLTEAVREIVSQLAQRNRR---VWLV 125
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL++ + V+ V +SA+ G GV+D+ D + +LP+GP YP+D
Sbjct: 126 LNKTDLMRRDALLPLTAELSGLLTVEHVFMISARSGQGVDDLMDRMAAELPVGPYLYPED 185
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P+R E++RE+IF+Q EVPYA S++ RP I+V I V + S K
Sbjct: 186 DLTDLPDRLLAAELVREQIFLQTHEEVPYAATAETESFQERPDGSVRIEVTIYVARASHK 245
Query: 353 IILIGK 358
ILIG+
Sbjct: 246 AILIGE 251
>gi|387929771|ref|ZP_10132448.1| GTPase Era [Bacillus methanolicus PB1]
gi|387586589|gb|EIJ78913.1| GTPase Era [Bacillus methanolicus PB1]
Length = 298
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 157/252 (62%), Gaps = 6/252 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKST N++IGQK++I++NKPQTTR++I G+ + + Q+I DTPGI
Sbjct: 3 KSGFISIIGRPNVGKSTFLNRVIGQKIAIMSNKPQTTRNKIQGVLTLHDSQLIFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K +A D ++ +V+A + + +E + E + K P+ LV+
Sbjct: 63 HKPK-HKLGDFMIKVAINALKEVDLVLFMVNAEEGFGKGEEFIIEKF--QQIKTPVFLVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P E+ +E Y++ E+IP+SA G+ ++ + + I LP GP YYP D
Sbjct: 120 NKIDNIHPDELLPIIESYKEKYTFSEIIPISALQGNNIDTLLEIIKKYLPEGPQYYPADQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEKNSQ 351
V++HPERF V E+IREK R EVP++ V V+ R + I V ++VE++SQ
Sbjct: 180 VTDHPERFIVSELIREKALHLTREEVPHSLAV-VIDKMERREGSNVIHVMASVIVERDSQ 238
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 239 KGIIIGKQGKML 250
>gi|317122971|ref|YP_004102974.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885]
gi|315592951|gb|ADU52247.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885]
Length = 391
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 153/252 (60%), Gaps = 16/252 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+PNVGKSTL NQ+IG+K++I+++KPQTTR RILG+ + P Q+I DTPGI
Sbjct: 99 RSGFVALIGRPNVGKSTLLNQLIGRKIAIMSDKPQTTRTRILGVLNRPGAQLIFVDTPGI 158
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 226
K H+L M++ R + + LV+A P+R E G GD + K
Sbjct: 159 -HKPQHLLGEHMVRVARRTLQEVEVVCWLVEA---PDR-----EPGPGDRYIAEQLVEVK 209
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P +LV+NK D + PGE+ + + + V PVSA +G GV ++ + + +LP GP
Sbjct: 210 TPKILVVNKIDQVAPGEVPAIAQRFAQLGQFAAVHPVSALHGVGVPELVEELEGRLPQGP 269
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
++P+D++++ PE + E+IRE+I + R EVP+A V + + RP ++ I V
Sbjct: 270 RFFPEDMITDQPEAQIMAELIREQILHRTREEVPHAVAVLIEKVERRPNGVVYVPATIYV 329
Query: 347 EKNSQKIILIGK 358
E+ QK ILIG+
Sbjct: 330 EREGQKRILIGE 341
>gi|395240856|ref|ZP_10417880.1| GTP-binding protein Era [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475638|emb|CCI87857.1| GTP-binding protein Era [Lactobacillus gigeriorum CRBIP 24.85]
Length = 302
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 150/253 (59%), Gaps = 10/253 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++GQK++I +NKPQTTR+RI GI S Q++ DTPGI
Sbjct: 8 KSGFVALVGRPNVGKSTLMNRLVGQKVAITSNKPQTTRNRISGIYSSDNMQVVFVDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPIL 230
K LD+ M + S+ + D ++ +V+ A K I E+LE K K+P+
Sbjct: 68 F-KPHSELDNYMDRASLSSLNDVDLVLFMVEPEPAGKGDRYIAELLE------KVKVPVF 120
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + P ++ + ++ Y + D E +PVSA G G+ED+ + L +GP YY
Sbjct: 121 LLINKVDRVYPDKLLEVIDSYRQLGDFTEFLPVSATEGIGIEDLLASLHKTLEIGPQYYS 180
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++ PE F V E+IRE+I EVP+A V V R K I+ I VE+
Sbjct: 181 SDEVTDRPEYFVVAELIREQILQLTSQEVPHATAVAVERMNQRVNGKLQIEATIYVERAG 240
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 241 QKGIIIGKSGKML 253
>gi|383753798|ref|YP_005432701.1| putative GTP-binding protein Era [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365850|dbj|BAL82678.1| putative GTP-binding protein Era [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 299
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 150/257 (58%), Gaps = 17/257 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++AV+G+PNVGKSTL N +IGQK++I+++KPQTTR+RIL I + P+ Q++ DTPGI
Sbjct: 6 KSGFIAVIGRPNVGKSTLINTLIGQKIAIMSDKPQTTRNRILCILTQPDAQIVFLDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 226
+ K H L M+K D I +VDA + + G G+H K
Sbjct: 66 HKPK-HKLGEYMVKAAEGTLREVDAIFFVVDATE---------KMGPGEHYILERLQATK 115
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P++LV+NK DLI+ + + Y + V+P+SAK ++ + LP GP
Sbjct: 116 RPVILVVNKLDLIEREQALPIISNYTSKYEFAGVVPISAKEEMNLDSLLTEAKKYLPEGP 175
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YYP+D+V++ PER V E+IREK R+E+P+A V+V TRP +I+ I V
Sbjct: 176 QYYPEDMVTDQPERLIVAELIREKALQLTRDEIPHAIAVDVDEMTTRPNDDVYIRATIYV 235
Query: 347 EKNSQKIILIGKVSPFL 363
E++SQK I+IG L
Sbjct: 236 ERDSQKGIVIGAKGAML 252
>gi|357637362|ref|ZP_09135237.1| GTP-binding protein Era [Streptococcus macacae NCTC 11558]
gi|357585816|gb|EHJ53019.1| GTP-binding protein Era [Streptococcus macacae NCTC 11558]
Length = 299
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKVQTTRNKIMGIYTTDQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ ++ A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMISADEARGKGDDMIMERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|251796247|ref|YP_003010978.1| GTP-binding protein Era [Paenibacillus sp. JDR-2]
gi|247543873|gb|ACT00892.1| GTP-binding protein Era [Paenibacillus sp. JDR-2]
Length = 299
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 147/255 (57%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +SG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + Q++
Sbjct: 2 TQTKFRSGFVAIIGRPNVGKSTLMNHLIGQKIAIMSDKPQTTRNKIHGVYTTDTSQIVFL 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K L MMK A + ++ L+D D + E + K P
Sbjct: 62 DTPGI-HKPQSKLGDYMMKTAEGALKEVEAVLFLIDVADGLGGGDRFIIEQL--KKVDTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D ++P ++ + Y+ E++P+SA G+ VE + + LP GP Y
Sbjct: 119 VFLVMNKIDKVQPEQLLSTITQYKDLYPFAEIVPISALQGNNVETLLAQLQKYLPEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPE+F V E+IREKI R E+P++ V + K + +I I VE+
Sbjct: 179 YPADQVTDHPEQFVVSELIREKILHMTREEIPHSIAVGIEDMKVQENGVVYIGAVIFVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIIIGKKGALL 253
>gi|404330396|ref|ZP_10970844.1| GTPase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 301
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 149/251 (59%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL NQ++GQK++I+++K QTTR++I GI + + Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNQVLGQKIAIMSDKAQTTRNKIHGIYTTDQEQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K H L +M D ++ ++DA + R D+ + + + K P+ LV+
Sbjct: 66 -HKPRHRLGEVMTAMAIDTLNEVDLVLFMIDAVQGYGRGDQFIIDAL--KKSDTPVFLVV 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++ Y D E++PVSA V + + + LP GP YYP+D
Sbjct: 123 NKIDQVHPDQLLPLIDKYRNLFDFAEIVPVSALRAQNVSTLLEQTASYLPEGPKYYPEDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
V++HPERF + E+IREKI +EVP++ V + K K +Q I+VE+ SQK
Sbjct: 183 VTDHPERFVISELIREKILQLTHDEVPHSIAVTIDQMKVDEQRNKAEVQATIIVERPSQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKSGSML 253
>gi|225182107|ref|ZP_03735535.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1]
gi|225167194|gb|EEG76017.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1]
Length = 302
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 150/252 (59%), Gaps = 6/252 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG++A++G+PNVGKSTL N +G+K++I+++KPQTTR++I GI + +YQ + DTPGI
Sbjct: 9 RSGFIALIGRPNVGKSTLMNAFVGEKMAIISDKPQTTRNQIRGILTADDYQAVFLDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ + + + M+ VR+ D I+ LVDA P D+ + + D + P++LV
Sbjct: 69 HKPQHKLGEKMVQVAVRTLQ-EVDLILFLVDAAAGPGAGDDYIIRQLSDVET--PVILVA 125
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D LE Y +PVSA G E++ I+ LP GP YYP+D+
Sbjct: 126 NKADEAGMEAAQNVLEHYLPLYPFKAALPVSAITGINQEELLSLIVDSLPEGPQYYPEDM 185
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEIVVEKNSQ 351
+++ PER V E++REK+ R+E+P+A V ++S K R +D IQ I VE++SQ
Sbjct: 186 ITDQPERLIVAELVREKVLQLTRDEIPHAIAVEIISMKNR-AGRDLVDIQANIYVERDSQ 244
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 245 KGIVIGKRGALL 256
>gi|377556063|ref|ZP_09785786.1| GTP-binding protein Era [Lactobacillus gastricus PS3]
gi|376168801|gb|EHS87529.1| GTP-binding protein Era [Lactobacillus gastricus PS3]
Length = 303
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 151/249 (60%), Gaps = 3/249 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + E Q+I DTPGI
Sbjct: 10 SGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTTNEAQIIFIDTPGIH 69
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
+ + + D M ++ SA D I+ +V A + D + E + K + PI LV+N
Sbjct: 70 KPQTKLGD-FMERSALSALDEVDAILFVVSATEKRGPGDNFIIERL--KKVQQPIYLVIN 126
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D + P ++ + + Y +VIPVSA G+ V + D ++ LP+GP YYP D V
Sbjct: 127 KIDQVHPNDLPEIVAQYNDTLPFKKVIPVSALQGNNVNGLIDELVDNLPVGPQYYPTDQV 186
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
S+HPERF V E+IREK+F+ R EVP++ ++V S K + I+VE+ QK I
Sbjct: 187 SDHPERFVVAEMIREKVFLLTRQEVPHSVAIDVTSIKRNNEETIEVDANIIVERPGQKGI 246
Query: 355 LIGKVSPFL 363
+IGK L
Sbjct: 247 IIGKKGSML 255
>gi|375009575|ref|YP_004983208.1| GTP-binding protein era [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288424|gb|AEV20108.1| GTP-binding protein era [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 302
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 157/250 (62%), Gaps = 8/250 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ + K H L MMK +A D I+ +V+A + R + + E + + P+ L
Sbjct: 65 GVHKPK-HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP
Sbjct: 122 VINKIDRVHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPP 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR---PTAKDFIQVEIVVEK 348
D +++HPE+F + E+IREK R EVP++ V V + R PT +I IVVE+
Sbjct: 182 DQITDHPEQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSPTV--YISAVIVVER 239
Query: 349 NSQKIILIGK 358
+SQK I+IGK
Sbjct: 240 DSQKGIIIGK 249
>gi|56421023|ref|YP_148341.1| GTP-binding protein [Geobacillus kaustophilus HTA426]
gi|56380865|dbj|BAD76773.1| GTP-binding protein [Geobacillus kaustophilus HTA426]
Length = 302
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 157/250 (62%), Gaps = 8/250 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ + K H L MMK +A D I+ +V+A + R + + E + + P+ L
Sbjct: 65 GVHKPK-HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP
Sbjct: 122 VINKIDRVHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPP 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR---PTAKDFIQVEIVVEK 348
D +++HPE+F + E+IREK R EVP++ V V + R PT +I IVVE+
Sbjct: 182 DQITDHPEQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSPTV--YISAVIVVER 239
Query: 349 NSQKIILIGK 358
+SQK I+IGK
Sbjct: 240 DSQKGIIIGK 249
>gi|392389914|ref|YP_006426517.1| GTP-binding protein Era [Ornithobacterium rhinotracheale DSM 15997]
gi|390520992|gb|AFL96723.1| GTP-binding protein Era [Ornithobacterium rhinotracheale DSM 15997]
Length = 295
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 154/253 (60%), Gaps = 19/253 (7%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+V ++G PNVGKSTL NQ++G++LSI+TNK QTTRHRI+GI + PE Q++ DTP
Sbjct: 4 NFKSGFVNIVGNPNVGKSTLMNQLVGERLSIITNKVQTTRHRIMGIVTTPEMQIVFSDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PI 229
G+++ + L S MM V A +AD I+ +V+ + E+L E + KL P+
Sbjct: 64 GVLQPA-YELQSRMMNFVEEAFKDADIILYVVEPNEK-----ELLNEEFNEKLKKLNIPV 117
Query: 230 LLVLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++++NK D + + W+E+ E++P+SA G + + D I LP GP Y
Sbjct: 118 IILINKIDESTQEAMESAVNFWHEQLPKA-EILPISALEGFNTDLLLDKIKALLPYGPQY 176
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF----IQVEI 344
YP+D +++ ERF V E+IREKI Y+ E+PYA +V +K +D I +I
Sbjct: 177 YPEDQLTDKSERFIVNEVIREKILENYQKEIPYAVEVVTERFK-----EDLHMIRIDADI 231
Query: 345 VVEKNSQKIILIG 357
VE++SQK ILIG
Sbjct: 232 YVERDSQKGILIG 244
>gi|333384114|ref|ZP_08475757.1| GTP-binding protein Era [Dysgonomonas gadei ATCC BAA-286]
gi|332826860|gb|EGJ99660.1| GTP-binding protein Era [Dysgonomonas gadei ATCC BAA-286]
Length = 293
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 155/247 (62%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+K+SI+T+K QTTRHRILGI + +YQ++ DTPG
Sbjct: 2 HKSGFVNIVGNPNVGKSTLMNLLVGEKVSIITSKAQTTRHRILGIVNTDDYQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ +V SA +AD ++ + D + ++ +E L++ P+LL+
Sbjct: 62 VLRPNYKLQESMLNFSV-SALSDADVLLYMTDVIEKTDKNEEFLQKV---QNVDAPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ K + +++ E+ P+SA V+ ++ IL +P P Y+ KD
Sbjct: 118 INKIDQTNQQELEKLVAQWKELLPKAEIYPISALNKFNVDTVKKRILDLIPESPPYFEKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ P RFFV EIIREKI + Y+ EVPYA +V V +K K+ I + I+ E+++
Sbjct: 178 ALTDRPARFFVTEIIREKILLYYQKEVPYAVEVIVEEFKDE---KEIINIRALIIAERDT 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|404493025|ref|YP_006717131.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380]
gi|77545089|gb|ABA88651.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380]
Length = 303
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 154/247 (62%), Gaps = 6/247 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RILGI + P+ Q++ DTPG+
Sbjct: 12 RSGFVAIIGRPNVGKSTLLNSVLGQKIAITSNKPQTTRNRILGIYNQPDAQVLFLDTPGV 71
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K ML+ M+ S + D +++LV+A D+ + E V + +P++LV+
Sbjct: 72 HKAK-GMLNRYMVDQALSTCGDVDVVLMLVEANDRLGGGDDYVLEQVS--RSNVPVILVI 128
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI E+ +E Y E+IPVSA G G E + ++ LP GP YY +D+
Sbjct: 129 NKVDLIHRPELLPLIEAYTGKYAFSEIIPVSALTGEGTEQLVSSLVKYLPEGPRYYAEDM 188
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQ 351
V++ PERF V E+IRE+I Q E+P+ V V ++ +P K+ + +E I V +
Sbjct: 189 VTDLPERFIVAEMIREQILKQTHQEIPHGVAVEVDHFEEKP-EKNLVVIEACIYVSREGH 247
Query: 352 KIILIGK 358
K I++G+
Sbjct: 248 KKIVLGR 254
>gi|315223060|ref|ZP_07864939.1| GTP-binding protein Era [Streptococcus anginosus F0211]
gi|315188010|gb|EFU21746.1| GTP-binding protein Era [Streptococcus anginosus F0211]
Length = 299
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVSADENRGKGDDMIMERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPNQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|392412079|ref|YP_006448686.1| GTP-binding protein Era [Desulfomonile tiedjei DSM 6799]
gi|390625215|gb|AFM26422.1| GTP-binding protein Era [Desulfomonile tiedjei DSM 6799]
Length = 299
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 156/245 (63%), Gaps = 4/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG VA+ G+PNVGKSTL N ++G++LSIVT K QTTR+RI I + PE Q++L+DTPGI
Sbjct: 10 RSGIVALAGRPNVGKSTLVNTILGRELSIVTPKAQTTRNRITAIHTMPEAQLVLHDTPGI 69
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + +++ ++ +AD I+++ + + R D + + +G K + P +L L
Sbjct: 70 HDPKTPLNRALVAIAAKTLE-DADIILLITEPLEEIHREDLQIVDMIG--KTRTPAVLAL 126
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +KP + +E + + +E++P+SA +G GV ++ + ++ LP GPA +P+D
Sbjct: 127 NKIDTVKPQALLPVIENFNRLERFEEIVPISALHGDGVTELVNILIRMLPPGPALFPEDE 186
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+S+ P RFFV EI+RE+I E+PY V V S+K + + I V++ E++SQK
Sbjct: 187 ISDLPVRFFVAEIVREQITRMTGEEIPYKTSVVVESFKEE-SERILIHVDVHTERDSQKK 245
Query: 354 ILIGK 358
ILIGK
Sbjct: 246 ILIGK 250
>gi|448238767|ref|YP_007402825.1| GTP-binding protein [Geobacillus sp. GHH01]
gi|445207609|gb|AGE23074.1| GTP-binding protein [Geobacillus sp. GHH01]
Length = 302
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 157/253 (62%), Gaps = 4/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ + K H L MMK +A D I+ +V+A + R + + E + + P+ L
Sbjct: 65 GVHKPK-HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP
Sbjct: 122 VINKIDRVHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPP 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNS 350
D +++HPE+F + E+IREK R EVP++ V V + R + +I IVVE++S
Sbjct: 182 DQITDHPEQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSGTVYISAVIVVERDS 241
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 242 QKGIIIGKQGRML 254
>gi|406025074|ref|YP_006705375.1| GTPase Era [Cardinium endosymbiont cEper1 of Encarsia pergandiella]
gi|404432673|emb|CCM09955.1| GTPase Era [Cardinium endosymbiont cEper1 of Encarsia pergandiella]
Length = 298
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 157/254 (61%), Gaps = 12/254 (4%)
Query: 107 YASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 166
+A ++KSG+VA++GKPN GKSTL N ++G++L++ +K QTTRH++ GI S ++Q+I
Sbjct: 2 HADKSDYKSGFVAIMGKPNAGKSTLMNLLVGERLAVTHSKAQTTRHKLYGIVSEKKFQII 61
Query: 167 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK 226
DTPGII + L + MM+ V+ A +AD I+ +VD D +L V +H K
Sbjct: 62 YIDTPGIITPA-YPLQTAMMEAVKVARADADLIIWVVDVK------DLVLLPWVDEHYTK 114
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
PI+LVLNK DL+ ++ + ++ ++P+SA ++ + I+ +LP P
Sbjct: 115 KPIILVLNKVDLVTANQLNVAIAYWRNHKPGVAIVPISALKKENIDLLLQQIIEQLPNHP 174
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--I 344
YYP++ +++ PERFFV EIIREKI QYR E+PY+ +V + +K I++ I
Sbjct: 175 PYYPEETLTDKPERFFVQEIIREKILDQYRQEIPYSVEVVIDHFK---ETDHLIKIRSII 231
Query: 345 VVEKNSQKIILIGK 358
VE+ +QK I+IG+
Sbjct: 232 HVERPTQKGIIIGQ 245
>gi|261418494|ref|YP_003252176.1| GTP-binding protein Era [Geobacillus sp. Y412MC61]
gi|297529346|ref|YP_003670621.1| GTP-binding protein Era [Geobacillus sp. C56-T3]
gi|319767545|ref|YP_004133046.1| GTP-binding protein Era [Geobacillus sp. Y412MC52]
gi|261374951|gb|ACX77694.1| GTP-binding protein Era [Geobacillus sp. Y412MC61]
gi|297252598|gb|ADI26044.1| GTP-binding protein Era [Geobacillus sp. C56-T3]
gi|317112411|gb|ADU94903.1| GTP-binding protein Era [Geobacillus sp. Y412MC52]
Length = 302
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 157/253 (62%), Gaps = 4/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ + K H L MMK +A D I+ +V+A + R + + E + + P+ L
Sbjct: 65 GVHKPK-HKLGDFMMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDT--PVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P E+ ++ Y+ E++P+SA G+ V+ + + I +LP GP YYP
Sbjct: 122 VINKIDRVHPDELLPLIDRYKDLYPFAEIVPISALEGNNVDRLLEQIKERLPEGPQYYPP 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNS 350
D +++HPE+F + E+IREK R EVP++ V V + R + +I IVVE++S
Sbjct: 182 DQITDHPEQFIIAELIREKALHLTREEVPHSIAVVVERIERREGSGTVYISAVIVVERDS 241
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 242 QKGIIIGKQGRML 254
>gi|373501195|ref|ZP_09591560.1| GTP-binding protein Era [Prevotella micans F0438]
gi|371950102|gb|EHO67961.1| GTP-binding protein Era [Prevotella micans F0438]
Length = 293
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H++G+V ++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HRAGFVNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTSDTQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + L + + P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALTDADILLYVTDVVENPEKNADFLAKVSNINT---PVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DLI ++ ++ + + E++P+SA+ G++ + I LP PAY+ K
Sbjct: 118 INKIDLINQKQLIALVDKWHRLLPNAEILPISAQNKFGIDTLMKRIEELLPESPAYFDKA 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y E+PY+ +V V +K P + I I VE+NSQK
Sbjct: 178 QLTDKPAKFFVTEIIREKILRYYDKEIPYSVEVTVEQFKETPQHIN-ISAIIYVERNSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|255320779|ref|ZP_05361954.1| GTP-binding protein Era [Acinetobacter radioresistens SK82]
gi|262379445|ref|ZP_06072601.1| GTP-binding protein Era [Acinetobacter radioresistens SH164]
gi|421465570|ref|ZP_15914257.1| GTP-binding protein Era [Acinetobacter radioresistens WC-A-157]
gi|255302156|gb|EET81398.1| GTP-binding protein Era [Acinetobacter radioresistens SK82]
gi|262298902|gb|EEY86815.1| GTP-binding protein Era [Acinetobacter radioresistens SH164]
gi|400203837|gb|EJO34822.1| GTP-binding protein Era [Acinetobacter radioresistens WC-A-157]
Length = 342
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 26/295 (8%)
Query: 86 LSEKPDRNMA-----SPDDYEIEEFDYASH-----PNHKSGYVAVLGKPNVGKSTLANQM 135
+S +PD+N +PD+ I++F ++S + KSG+VA++G+PNVGKSTL N +
Sbjct: 1 MSIQPDQNSTDQESNTPDNNLIDQF-FSSQGVTIPADFKSGFVAIVGRPNVGKSTLMNHL 59
Query: 136 IGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGIN 195
+GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA +
Sbjct: 60 LGQKLSITSRKPQTTRHKIIGIDSREKSQAVYVDTPGMHKKEVRAINKMMNRAAHSALRD 119
Query: 196 ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKL-EWYEKF 254
+ ++ +VDA K + D +LE+ ++P++LV+NK D I+ L + K
Sbjct: 120 VNLVLFVVDAHKWTQNDDLVLEKL---KNAEMPVILVINKIDTIEEKRTLLPLIQERTKL 176
Query: 255 TDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQ 314
+ E++PVSA G +E +RD I LP P Y D +++ ERF E+IREKI Q
Sbjct: 177 MNFVEIVPVSALRGANLEHLRDTIDKYLPFQPPLYSFDQITDRSERFLASEVIREKIMRQ 236
Query: 315 YRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVVEKNSQKIILIGK 358
E+PY V + S+KT A + +I I V++ QK I+IG+
Sbjct: 237 LGEELPYDLTVQIESFKTEEPALNEKTGRMKAACTYIDATIFVDRPGQKAIVIGE 291
>gi|308180766|ref|YP_003924894.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046257|gb|ADN98800.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 302
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 156/256 (60%), Gaps = 17/256 (6%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR+RI GI + + QM+ DTPGI
Sbjct: 9 SGFVAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGI- 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL----- 227
K L M+K+ S D ++ +++A DE G GD+ D+L
Sbjct: 68 HKPHSRLGDFMVKSALSTLGEVDAVLFMINA-------DE--RRGAGDNFIIDRLKTVKQ 118
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
PI LV+NK D + P + + ++ Y+ EV P+SA G+ V+++ + +LP GP
Sbjct: 119 PIYLVINKIDQVHPNHLLEIMDQYKDALPWKEVYPISALEGNNVDELLTTLKGQLPEGPQ 178
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP D +++HPERF + E+IREK+ R EVP++ V + S K + K +Q I++E
Sbjct: 179 YYPSDQITDHPERFIISELIREKVLELTRQEVPHSTAVVIDSIKRQDEEKIHVQATIIIE 238
Query: 348 KNSQKIILIGKVSPFL 363
++SQK I+IGK L
Sbjct: 239 RSSQKGIIIGKGGSML 254
>gi|153809062|ref|ZP_01961730.1| hypothetical protein BACCAC_03370 [Bacteroides caccae ATCC 43185]
gi|423216735|ref|ZP_17203231.1| GTP-binding protein Era [Bacteroides caccae CL03T12C61]
gi|149128395|gb|EDM19614.1| ribosome biogenesis GTPase Era [Bacteroides caccae ATCC 43185]
gi|392629265|gb|EIY23272.1| GTP-binding protein Era [Bacteroides caccae CL03T12C61]
Length = 293
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 154/246 (62%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEEWKELLPQAEIIPISAASKFNVDYVMKRIKELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I+ I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVAVEEFKEE-AKKIHIRAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|116492866|ref|YP_804601.1| GTPase [Pediococcus pentosaceus ATCC 25745]
gi|122265670|sp|Q03F63.1|ERA_PEDPA RecName: Full=GTPase Era
gi|116103016|gb|ABJ68159.1| GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 304
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 158/262 (60%), Gaps = 6/262 (2%)
Query: 102 IEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 161
+EE + A H SG+VA++G+PNVGKST N +IGQK++I++N PQTTR++I GI +
Sbjct: 1 MEENNQAFH----SGFVAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTD 56
Query: 162 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG 221
Q++ DTPGI K + L M+++ S+ D I+ +V+A + D + E +
Sbjct: 57 REQIVFIDTPGI-HKSHNKLGDFMVQSAMSSLNEVDAIMFMVNADEPRGAGDNYIIERLK 115
Query: 222 DHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
D+ P+ LV+NK DL+ P E+ ++ Y+ D EV P+SA G+ + ++ +
Sbjct: 116 KITDR-PVYLVINKIDLVHPDELLPIVDSYKDAMDWTEVFPISALQGNNINELVTTLSQH 174
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+P GP YYP D V++HPERF V E+IREK+ R EVP++ V + + K+ IQ
Sbjct: 175 MPEGPKYYPDDQVTDHPERFVVSELIREKVLQLTRQEVPHSVAVVIETMKSNDEGLVNIQ 234
Query: 342 VEIVVEKNSQKIILIGKVSPFL 363
I+V+++SQK I+IGK L
Sbjct: 235 ATIIVDRSSQKGIVIGKGGKML 256
>gi|392949010|ref|ZP_10314609.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus pentosus
KCA1]
gi|334880401|emb|CCB81131.1| GTP-binding protein era homolog [Lactobacillus pentosus MP-10]
gi|339638996|emb|CCC18202.1| GTPase Era [Lactobacillus pentosus IG1]
gi|392435829|gb|EIW13754.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus pentosus
KCA1]
Length = 302
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 156/256 (60%), Gaps = 17/256 (6%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR+RI GI + + QM+ DTPGI
Sbjct: 9 SGFVAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGI- 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL----- 227
K L M+K+ S D ++ +++A DE G GD+ D+L
Sbjct: 68 HKPHSRLGDFMVKSALSTLGEVDAVLFMINA-------DE--RRGAGDNFIIDRLKNVKQ 118
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
PI LV+NK D + P + + ++ Y+ EV P+SA G+ V+++ + +LP GP
Sbjct: 119 PIYLVINKIDQVHPDHLLEIMDQYKDALPWKEVYPISALEGNNVDELLATLKKQLPEGPQ 178
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP D V++HPERF + E+IREK+ R EVP++ V + S K + K +Q I++E
Sbjct: 179 YYPSDQVTDHPERFIISELIREKVLELTRQEVPHSTAVVIDSIKRQDEEKIHVQATIIIE 238
Query: 348 KNSQKIILIGKVSPFL 363
++SQK I+IGK L
Sbjct: 239 RSSQKGIIIGKGGSML 254
>gi|224025981|ref|ZP_03644347.1| hypothetical protein BACCOPRO_02732 [Bacteroides coprophilus DSM
18228]
gi|224019217|gb|EEF77215.1| hypothetical protein BACCOPRO_02732 [Bacteroides coprophilus DSM
18228]
Length = 293
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 155/247 (62%), Gaps = 7/247 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA ++AD ++ + D + P++ E +E+ + +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFS-ESALVDADVLLYVTDTIEQPDKNQEFMEKV---RRLDVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K ++ + + E+IPVSAK V+ + I +P P Y+ KD
Sbjct: 118 INKIDLSNQKDLVKLVDQWHEMLPKAEIIPVSAKARFNVDAVMKRIRELIPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
+++ P RFFV EIIREKI + Y E+PYA +V V +K AK I I VE++SQ
Sbjct: 178 QLTDKPARFFVTEIIREKILLYYDKEIPYAVEVVVEQFKEE--AKSIHINAVIYVERDSQ 235
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 236 KGIIIGK 242
>gi|456011645|gb|EMF45382.1| GTP-binding protein Era [Planococcus halocryophilus Or1]
Length = 305
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 157/257 (61%), Gaps = 15/257 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + QMI DTPGI
Sbjct: 9 KSGFISIIGRPNVGKSTFLNRVVGQKIAIMSDKPQTTRNKVQGVVTTNDSQMIFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVL---VDACKAPERIDEILEEGVGDHKDKLPIL 230
E + H L M+K ++ D ++ + VD +R + +G+ +P+
Sbjct: 69 NEPR-HKLGDFMLKVAKNTFREVDVLLFVASGVDRVGKEDRYVLEMLKGI-----DVPVF 122
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LVLNK D + P + K +E Y K D E IP+SA G+ VE + I +LP GP YYP
Sbjct: 123 LVLNKIDQVHPDNLPKIIESYRKEFDFAEAIPISALEGNNVETLLAKINERLPEGPQYYP 182
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD----FIQVEIVV 346
D +++HPERF + E+IREK R E+P++ + VV K P +++ IQ I+V
Sbjct: 183 ADQITDHPERFIISELIREKALHLTREEIPHS--IAVVIEKIAPDSENENMIRIQATIMV 240
Query: 347 EKNSQKIILIGKVSPFL 363
E++SQK I+IGK L
Sbjct: 241 ERDSQKGIVIGKKGVLL 257
>gi|421894234|ref|ZP_16324724.1| GTP-binding protein Era [Pediococcus pentosaceus IE-3]
gi|385272778|emb|CCG90096.1| GTP-binding protein Era [Pediococcus pentosaceus IE-3]
Length = 304
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 158/262 (60%), Gaps = 6/262 (2%)
Query: 102 IEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 161
+EE + A H SG+VA++G+PNVGKST N +IGQK++I++N PQTTR++I GI +
Sbjct: 1 MEENNQAFH----SGFVAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTD 56
Query: 162 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG 221
Q++ DTPGI K + L M+++ S+ D I+ +V+A + D + E +
Sbjct: 57 REQIVFIDTPGI-HKSHNKLGDFMVQSAMSSLNEVDAIMFMVNADEPRGAGDNYIIERLK 115
Query: 222 DHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
D+ P+ LV+NK DL+ P E+ ++ Y+ D EV P+SA G+ + ++ +
Sbjct: 116 KITDR-PVYLVINKIDLVHPDELLPIVDSYKDAMDWTEVFPISALQGNNINELVTTLSQH 174
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+P GP YYP D V++HPERF V E+IREK+ R EVP++ V + + K+ IQ
Sbjct: 175 MPEGPKYYPDDQVTDHPERFVVSELIREKVLQLTRQEVPHSVAVVIETMKSNDEGLVNIQ 234
Query: 342 VEIVVEKNSQKIILIGKVSPFL 363
I+V+++SQK I+IGK L
Sbjct: 235 ATIIVDRSSQKGIVIGKGGKML 256
>gi|440780690|ref|ZP_20959161.1| GTPase Era [Clostridium pasteurianum DSM 525]
gi|440221278|gb|ELP60483.1| GTPase Era [Clostridium pasteurianum DSM 525]
Length = 297
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 151/246 (61%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V ++G+PNVGKSTL N ++G+KLSIV++KPQTTR+ I I +G + Q+I DTPG
Sbjct: 2 YKSGFVTIIGRPNVGKSTLLNYIMGEKLSIVSSKPQTTRNNIQTILTGKDSQLIFVDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K HML M+K + + D IV + + DE + E + + K +P+ LV
Sbjct: 62 IHKPK-HMLGEYMVKVATDSFKDVDLIVFVTTPDVTMGKGDEFILEQLKEVK--IPVFLV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D +A+ L+ Y + + E+IP+SA G V+ + + ++ +P GP YYP+D
Sbjct: 119 VNKIDETTKERVAETLKNYSEKFNFKEIIPISAAKGKNVDKLLEIMVEAMPEGPQYYPED 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++++ ERF V EIIREK EVP+ V ++S K +P + I+ + EKNS K
Sbjct: 179 MLTDVQERFVVSEIIREKALRLLSEEVPHGIAVEIMSMKQKPNGRYNIEATLFCEKNSHK 238
Query: 353 IILIGK 358
I+IGK
Sbjct: 239 GIIIGK 244
>gi|406894259|gb|EKD39118.1| hypothetical protein ACD_75C00507G0013 [uncultured bacterium]
Length = 358
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 148/248 (59%), Gaps = 3/248 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG VA++G PN GKSTL NQ +GQK+SIVT KPQTTR+RI GI + PEYQ++ DTPG+
Sbjct: 63 KSGMVAIVGPPNAGKSTLMNQFLGQKISIVTPKPQTTRNRIAGIVNDPEYQIVFLDTPGL 122
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL--PILL 231
+ + M+ + S + ++ + PE++ E + + ++ P ++
Sbjct: 123 HTSRESLNTEMVKIAMESLADVDVVLFLVDVSLPLPEKMKEEKRAELMAYFQQINSPAIM 182
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
VLNK D I + + Y VIPVSA G GVE +++ ILT LP+GP +P+
Sbjct: 183 VLNKIDQIDRKLMLPMIASYAGLYPFKAVIPVSALSGDGVESLKNEILTWLPIGPRLFPE 242
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 350
DI ++ ERF GEIIREK+F+ E+PY+ V + S+K + K + IVVE+NS
Sbjct: 243 DIPTDATERFLCGEIIREKVFLLTGQEIPYSTAVLIESFKEDESKKLVTLHAAIVVERNS 302
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 303 QKGIVIGK 310
>gi|387132166|ref|YP_006298138.1| GTP-binding protein Era [Prevotella intermedia 17]
gi|386375014|gb|AFJ08840.1| GTP-binding protein Era [Prevotella intermedia 17]
Length = 293
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + + MM++ SA +AD ++ + D + PE+ + LE+ K ++P++L+
Sbjct: 62 VL-KPNYKMQEMMLQFSESALSDADILLYVTDVIEKPEKNTDFLEKVA---KMQIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + + E++P+SAK G + + I LP PAY+ KD
Sbjct: 118 INKIDESDQKTLVTLVEKWHRLLPKAEILPISAKNKFGTDTLMKRIKELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|421860389|ref|ZP_16292520.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410830137|dbj|GAC42957.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 309
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 154/251 (61%), Gaps = 5/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 16 QSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 75
Query: 174 IEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++K + D M V +N + I+ LVD D+ + E + K K P++LV
Sbjct: 76 HKRKSKLGD--YMNQVAYNTLNEVEVILFLVDVSAGLGSGDKFVMEHLA--KVKTPVILV 131
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P E+ + Y + + E++P+SA +G+ V + + + + +P GP YYP D
Sbjct: 132 MNKIDQVNPDELPPMIHSYNERFEFAEIVPISALHGNNVNRLLEVLGSYMPEGPKYYPDD 191
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ HPE+F V E+IREKI R E+P++ V + + + +I I VE++SQK
Sbjct: 192 QITNHPEQFVVAELIREKILHLTREEIPHSIAVAIEDMRAQDNGVVYISAVIYVERDSQK 251
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 252 GIVIGKQGALL 262
>gi|212550703|ref|YP_002309020.1| GTP-binding protein Era [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548941|dbj|BAG83609.1| GTP-binding protein Era [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 300
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 151/248 (60%), Gaps = 9/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G KLSI+T+K QTTRHRI+GI + P Q++ DTPG
Sbjct: 9 HKSGFVNIVGNPNVGKSTLMNTLVGGKLSIITSKAQTTRHRIIGIVNKPNVQIVFSDTPG 68
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I+ + L M+ SA +AD ++ + D + D L++ + LPILL+
Sbjct: 69 ILRPN-YKLQKKMLNFSESALEDADILLYVSDIKNQLVKTDFFLKKM---QQTNLPILLI 124
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL ++ +K+ Y K E+IP+SA + ++ I LP P Y+ K+
Sbjct: 125 LNKIDLFNQKQLEQKVIEYHKILPNAEIIPISAINQFNTDYLQKRIEKLLPESPPYFEKN 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNS 350
+++ P RFF EIIREK+ + Y+ E+PY+ +V + +K + KD I ++ I+ E++S
Sbjct: 185 TITDRPARFFSTEIIREKVLLYYQKEIPYSVEVTIELFKEQ---KDLIWIKAIIITERDS 241
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 242 QKKIIIGK 249
>gi|392376032|ref|YP_003207865.1| GTP-binding protein (era) [Candidatus Methylomirabilis oxyfera]
gi|258593725|emb|CBE70066.1| GTP-binding protein (era) [Candidatus Methylomirabilis oxyfera]
Length = 300
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 152/248 (61%), Gaps = 4/248 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+VA++G+PNVGKSTL N+++GQK+SIV+ +PQTTR +I+GI S P Q+I DTP
Sbjct: 5 NDKSGFVAIIGRPNVGKSTLMNRLLGQKVSIVSPRPQTTRTKIMGIRSLPGAQLIFLDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G I+K +M+K ++ AD I+ +V+A + D+++ E + + PILL
Sbjct: 65 G-IDKSGGYFHRLMVKTATNSLEGADLILWIVEAPDPLSQGDKLILEIL--KRVTSPILL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL++ + ++ + E++P+SA G V + ++ LP GP YP
Sbjct: 122 AVNKVDLVQKESLLPTIDRFRSLLPFAEIVPISATKGDNVALLESLLVQYLPEGPPLYPP 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNS 350
D +++ P+RF + E+IRE++F EVPYA V V +TR A ++ I VEK+S
Sbjct: 182 DQLTDQPDRFIIAELIRERVFRSVYQEVPYAVAVLVEKVRTREGRALTDVEATIYVEKDS 241
Query: 351 QKIILIGK 358
QK I+IG+
Sbjct: 242 QKAIIIGR 249
>gi|189462215|ref|ZP_03011000.1| hypothetical protein BACCOP_02898 [Bacteroides coprocola DSM 17136]
gi|189431068|gb|EDV00053.1| ribosome biogenesis GTPase Era [Bacteroides coprocola DSM 17136]
Length = 293
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 156/247 (63%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA ++AD ++ + D + P++ + +E+ + K+P+LL+
Sbjct: 62 VLKPNYKLQESMLNFS-ESALVDADVLLYVTDTIEKPDKNADFMEKV---RRVKVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL E+ K +E W+E + E+IP+SAK V+ + I +P P Y+ K
Sbjct: 118 INKIDLTNQEELVKLVEEWHEMLPEA-EIIPISAKAKFNVDVVMKRIKELIPDSPPYFGK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 350
D +++ P RFFV EIIREKI + Y E+PYA +V V +K AK I I VE+ S
Sbjct: 177 DQLTDKPARFFVTEIIREKILLYYDKEIPYAVEVVVEQFKE--DAKSIHINAVIYVERES 234
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 235 QKGIIIG 241
>gi|386714855|ref|YP_006181178.1| GTP-binding protein Era [Halobacillus halophilus DSM 2266]
gi|384074411|emb|CCG45904.1| GTP-binding protein Era [Halobacillus halophilus DSM 2266]
Length = 301
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 158/254 (62%), Gaps = 6/254 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+V ++G+PNVGKST N++IG+K++I+++KPQTTR++I G+ + E Q++ DTP
Sbjct: 4 NFKSGFVTIVGRPNVGKSTFMNRVIGEKIAIMSDKPQTTRNKIQGVMTDKESQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
GI + K + D M+ NV +N D I+ +++A + R D+ + + + + P+
Sbjct: 64 GIHKPKHKLGDYMV--NVAENTLNEVDAILFMINAEEGYGRGDQFIIDRL--QRVNQPVY 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + P ++ +E Y++ D +E+IP+SA G+ V + D + LP GP +YP
Sbjct: 120 LIINKIDRVHPDQLLPLIEQYKEKLDFEEIIPISALEGNNVNHLLDVLKGHLPEGPQFYP 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKN 349
+D +++HPERF + E IREK+ E+P++ V + + R +IQ I+VE+
Sbjct: 180 EDQITDHPERFVISEFIREKVLHLTHEEIPHSIAVVIEGIEPRENKNAVYIQAAIIVERK 239
Query: 350 SQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 240 SQKGIIIGKQGSML 253
>gi|254556825|ref|YP_003063242.1| GTP-binding protein Era [Lactobacillus plantarum JDM1]
gi|300768138|ref|ZP_07078043.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|380032744|ref|YP_004889735.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
WCFS1]
gi|418275504|ref|ZP_12890827.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821472|ref|YP_007414634.1| GTPase Era [Lactobacillus plantarum ZJ316]
gi|38257324|sp|Q88VS0.1|ERA_LACPL RecName: Full=GTPase Era
gi|254045752|gb|ACT62545.1| GTP-binding protein Era [Lactobacillus plantarum JDM1]
gi|300494202|gb|EFK29365.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|342241987|emb|CCC79221.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
WCFS1]
gi|376009055|gb|EHS82384.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274969|gb|AGE39488.1| GTPase Era [Lactobacillus plantarum ZJ316]
Length = 302
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 156/256 (60%), Gaps = 17/256 (6%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR+RI GI + + QM+ DTPGI
Sbjct: 9 SGFVAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGI- 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL----- 227
K L M+K+ S D ++ +++A DE G GD+ D+L
Sbjct: 68 HKPHSRLGDFMVKSALSTLGEVDAVLFMINA-------DE--RRGAGDNFIIDRLKTVKQ 118
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
PI LV+NK D + P + + ++ Y+ EV P+SA G+ V+++ + +LP GP
Sbjct: 119 PIYLVINKIDQVHPDHLLEIMDQYKDALPWKEVYPISALEGNNVDELLTTLKGQLPEGPQ 178
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP D +++HPERF + E+IREK+ R EVP++ V + S K + K +Q I++E
Sbjct: 179 YYPSDQITDHPERFIISELIREKVLELTRQEVPHSTAVVIDSIKRQDEEKIHVQATIIIE 238
Query: 348 KNSQKIILIGKVSPFL 363
++SQK I+IGK L
Sbjct: 239 RSSQKGIIIGKGGSML 254
>gi|315607419|ref|ZP_07882415.1| GTP-binding protein Era [Prevotella buccae ATCC 33574]
gi|402306466|ref|ZP_10825511.1| GTP-binding protein Era [Prevotella sp. MSX73]
gi|315250851|gb|EFU30844.1| GTP-binding protein Era [Prevotella buccae ATCC 33574]
gi|400379790|gb|EJP32622.1| GTP-binding protein Era [Prevotella sp. MSX73]
Length = 293
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTEDTQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L++ K +P+LL+
Sbjct: 62 VLKPNYKM-QEMMLAFSESALADADVLLYVTDVVENPEKNVDFLDKV---KKMSIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++ +E + E++P+SAK GV+ + I LP PAY+ KD
Sbjct: 118 INKIDESDQKKLGDLVEKWHSLLPNAEILPISAKNKFGVDMLMRRIKELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EI+REKI + Y E+PY+ +V+V +K K I V I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIVREKILLYYDKEIPYSVEVSVERFK-EDEHKIHINVVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|402815807|ref|ZP_10865399.1| GTPase Era [Paenibacillus alvei DSM 29]
gi|402506847|gb|EJW17370.1| GTPase Era [Paenibacillus alvei DSM 29]
Length = 306
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 155/259 (59%), Gaps = 5/259 (1%)
Query: 106 DYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 165
D ++ +KSG+VA++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + Q+
Sbjct: 6 DQSNRNTYKSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTDHSQI 65
Query: 166 ILYDTPGIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHK 224
+ DTPGI ++K + D M NV +N + ++ LVD D+ + E + K
Sbjct: 66 VFLDTPGIHKRKSKLGD--YMNNVALNTLNEVEAVLFLVDVSAGLGGGDKYVIEQL--KK 121
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
+ P++LV+NK D + P + + Y + + E++P+SA G V + D + LP
Sbjct: 122 VRTPVILVMNKIDQVHPEALPPLIAEYNELHEFAEIVPISALNGSNVNRLLDVLGGYLPE 181
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP D +++HPE+F V E+IREKI R E+P++ V + + + +I I
Sbjct: 182 GPQYYPDDQITDHPEQFVVAELIREKILHLTREEIPHSIAVTIEDMRVQENGVVYISAVI 241
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 242 FVERDSQKGIVIGKQGALL 260
>gi|373859076|ref|ZP_09601808.1| GTP-binding protein Era [Bacillus sp. 1NLA3E]
gi|372451167|gb|EHP24646.1| GTP-binding protein Era [Bacillus sp. 1NLA3E]
Length = 306
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 158/258 (61%), Gaps = 6/258 (2%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
+ N KSG+V+++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + Q++
Sbjct: 5 TGNKNFKSGFVSIIGRPNVGKSTFLNKVVGQKIAIMSDKPQTTRNKVQGVLTTDDAQLVF 64
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPGI K H L MMK + D I+ +V+A + R +E + E + K
Sbjct: 65 IDTPGI-HKPQHKLGDFMMKVAINTLREVDLILFMVNAEEGFGRGEEFILEKF--QEVKT 121
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
PI LV+NK DL+ P ++ + + Y++ + E++P+SA G+ +E + + I +P GP
Sbjct: 122 PIFLVINKIDLVHPDKLFEIIVSYKEKYNFAEIVPISALQGNNIEKVLEQIKRYVPEGPQ 181
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIV 345
YYP D V++HPERF + E+IREK EVP++ V ++ R K I V I+
Sbjct: 182 YYPADQVTDHPERFIITELIREKALQLTHEEVPHSIAV-IMEKLDRSDKKGTIHVMASII 240
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 241 VERDSQKGIIIGKQGKML 258
>gi|421854665|ref|ZP_16287050.1| GTPase Era [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
gi|403189680|dbj|GAB73251.1| GTPase Era [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
Length = 342
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 168/295 (56%), Gaps = 26/295 (8%)
Query: 86 LSEKPDRNMA-----SPDDYEIEEFDYASH-----PNHKSGYVAVLGKPNVGKSTLANQM 135
+S +PD+N +PD+ I++F ++S + KSG+VA++G+PNVGKSTL N +
Sbjct: 1 MSIQPDQNSTDQESNTPDNNLIDQF-FSSQGVTIPADFKSGFVAIVGRPNVGKSTLMNHL 59
Query: 136 IGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGIN 195
+GQKLSI + KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA +
Sbjct: 60 LGQKLSITSRKPQTTRHKIIGIDSREKSQAVYVDTPGMHKKEVRAINKMMNRAAHSALRD 119
Query: 196 ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKL-EWYEKF 254
+ ++ VDA K + D +LE+ ++P++LV+NK D I+ L + K
Sbjct: 120 VNLVLFAVDAHKWTQNDDLVLEKL---KNAEMPVILVINKIDTIEEKRTLLPLIQERTKL 176
Query: 255 TDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQ 314
+ E++PVSA G +E +RD I LP P Y D +++ ERF E+IREKI Q
Sbjct: 177 MNFVEIVPVSALRGANLEHLRDTIDKYLPFQPPLYSFDQITDRSERFLASEVIREKIMRQ 236
Query: 315 YRNEVPYACQVNVVSYKTRPTAKD-----------FIQVEIVVEKNSQKIILIGK 358
E+PY V + S+KT A + +I I V++ QK I+IG+
Sbjct: 237 LGEELPYDLTVQIESFKTEEPALNEKTGRMKAACTYIDATIFVDRPGQKAIVIGE 291
>gi|189500921|ref|YP_001960391.1| GTP-binding protein Era [Chlorobium phaeobacteroides BS1]
gi|189496362|gb|ACE04910.1| GTP-binding protein Era [Chlorobium phaeobacteroides BS1]
Length = 306
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 146/250 (58%), Gaps = 8/250 (3%)
Query: 116 GYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIE 175
GYVA++G PN GKSTL N+++ KLSIVT KPQTTR +I GI Q++ DTPGI+
Sbjct: 10 GYVAIIGPPNAGKSTLLNRLLNHKLSIVTPKPQTTRKKITGIYHSDRCQILFLDTPGIM- 68
Query: 176 KKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH---KDKLPILLV 232
K + L M+ RS AD I+ ++ A K D+ E + P++
Sbjct: 69 KPMQELHQSMLTATRSTLKEADVIITMIPASKKNGLFDQDFTELLFREWLTNTGKPVIAA 128
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + GE + L ++ + ++ + VSA G G +D+ + ++ LP YP+D
Sbjct: 129 LNKSDFLNAGEQEEALRIIKERWNPEKALAVSALKGSGTDDLIEALIPLLPASAPLYPED 188
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDFIQVEIVVEK 348
I+S PERFFV EIIREKIF+ Y E+PY+ +V V +K + + KD I+ IVVE+
Sbjct: 189 ILSTAPERFFVSEIIREKIFLFYGQEIPYSTEVVVDEFKEQHENDSSRKDLIRCSIVVER 248
Query: 349 NSQKIILIGK 358
++QK ILIGK
Sbjct: 249 DTQKHILIGK 258
>gi|262375525|ref|ZP_06068758.1| GTP-binding protein Era [Acinetobacter lwoffii SH145]
gi|262309779|gb|EEY90909.1| GTP-binding protein Era [Acinetobacter lwoffii SH145]
Length = 342
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 151/259 (58%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+++SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K D +LE+ ++P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTPNDDLVLEKL---KNAEMPVIL 152
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E + EK + E++PVSA G +E +RD I LP P Y
Sbjct: 153 VINKLDTFENKNEALPLIREREKLMNFAEIVPVSALRGANLEHLRDTIAKYLPFQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-----------PTAKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 LDQLTDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEPVLNEKTGRMKAACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ SQK I+IG+
Sbjct: 273 IDATIFVDRPSQKAIVIGE 291
>gi|299822890|ref|ZP_07054776.1| GTP-binding protein Era [Listeria grayi DSM 20601]
gi|299816419|gb|EFI83657.1| GTP-binding protein Era [Listeria grayi DSM 20601]
Length = 301
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 152/251 (60%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIAFNTFQEVDLIYFVIDASTGLGRGDEFIIEKLKNVDT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P + + + Y + + E+IP+SA G+ V ++ L GP YYPKD
Sbjct: 123 NKIDLISPDALLELIASYREKMEFTEIIPISALQGNNVPNLLTETNEHLDEGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTIMATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|390631171|ref|ZP_10259136.1| GTPase Era [Weissella confusa LBAE C39-2]
gi|390483599|emb|CCF31484.1| GTPase Era [Weissella confusa LBAE C39-2]
Length = 302
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 152/250 (60%), Gaps = 3/250 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG+VA++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + E Q++
Sbjct: 2 SEQGFKSGFVALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTDEGQIVFM 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+K SA AD + LV+A + D+ + + D P
Sbjct: 62 DTPGI-HKPHNSLGDFMVKTAMSALREADMVWFLVNADEPRGAGDDFIINRLKDTN--TP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK DL+ P ++ + Y + + E+ P+SA G GV ++ D+ + K+ GP Y
Sbjct: 119 VYLIINKIDLVNPSDLLAIIADYSQQMEFAEIFPISALKGDGVPELLDFAMDKMEEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D +++HPERF + E+IREK+ R EVP++ V + + + +Q IVVE+
Sbjct: 179 YPADQITDHPERFIMSELIREKVLQLTRQEVPHSVAVVIDKIERQDENHLHVQATIVVER 238
Query: 349 NSQKIILIGK 358
+QK I+IGK
Sbjct: 239 PTQKNIVIGK 248
>gi|323490066|ref|ZP_08095287.1| GTP-binding protein Era-like protein (Bex protein) [Planococcus
donghaensis MPA1U2]
gi|323396362|gb|EGA89187.1| GTP-binding protein Era-like protein (Bex protein) [Planococcus
donghaensis MPA1U2]
Length = 305
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 154/255 (60%), Gaps = 11/255 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + QMI DTPGI
Sbjct: 9 KSGFISIIGRPNVGKSTFLNRVVGQKIAIMSDKPQTTRNKVQGVVTTNDSQMIFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVL---VDACKAPERIDEILEEGVGDHKDKLPIL 230
E + H L M+K ++ D ++ + VD +R + +G+ +P+
Sbjct: 69 NEPR-HKLGDFMLKVAKNTFREVDVLLFVASGVDRVGKEDRYVLEMLKGI-----DVPVF 122
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D + P + K +E Y D E IP+SA G+ VE + I +LP GP YYP
Sbjct: 123 LVINKIDQVHPDNLPKIIESYRNEFDFAEAIPISALEGNNVETLLAKINERLPEGPQYYP 182
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEK 348
D +++HPERF + E+IREK R E+P++ V + KD I+V+ I+VE+
Sbjct: 183 ADQITDHPERFIISELIREKALHLTREEIPHSIAVVIEKIAPDSENKDMIRVQATIMVER 242
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 243 DSQKGIVIGKKGVLL 257
>gi|335032377|ref|ZP_08525774.1| ribosome biogenesis GTPase Era [Streptococcus anginosus SK52 = DSM
20563]
gi|333767046|gb|EGL44310.1| ribosome biogenesis GTPase Era [Streptococcus anginosus SK52 = DSM
20563]
Length = 299
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKSKTALGD-FMVESAYSTLREVDTVLFMVSADEKRGKGDDMIMERL--KVAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P +
Sbjct: 121 NKIDKVHPNQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPAEQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|118444749|ref|YP_878552.1| GTP-binding protein Era [Clostridium novyi NT]
gi|189037263|sp|A0Q1Q0.1|ERA_CLONN RecName: Full=GTPase Era
gi|118135205|gb|ABK62249.1| GTP-binding protein Era [Clostridium novyi NT]
Length = 294
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I + + +YQ++ DTPGI
Sbjct: 3 KSGFISIIGRPNVGKSTLTNEILGEKLSIVSCRPQTTRNNIRAVLTRDDYQLVFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K H L M+K ++ D IV + + DE++ EG+ + K P+ LV+
Sbjct: 63 -HKPRHKLGEYMVKAAETSTDEVDLIVFITTPEGEISKGDELILEGLKNSKK--PVFLVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK L+ Y ++ D E+IP+SA+ V+ + + ++ +P GP YYP+D+
Sbjct: 120 NKIDENPQELVAKTLKQYSEYMDFAEIIPISARKSKNVDTLLELMIKYMPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EIIREK EVP+ V ++S K I ++ EK+S K
Sbjct: 180 ITDVQERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQSKRGTYHIDANLLCEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|227432225|ref|ZP_03914221.1| GTP-binding protein Era [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351998|gb|EEJ42228.1| GTP-binding protein Era [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 303
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA A R D+ + + + + K+ PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVVDAAMARGRGDDFIIDRLQEVKNT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWYEK-FTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y+ ++ EV P+SA G V ++ D I++ L GP Y+ D
Sbjct: 125 NKVDLLAPNDLLDVIASYQNDASEWAEVFPISATEGDNVPELLDNIVSHLDEGPQYFDAD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKIARENEEKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|406837897|ref|ZP_11097491.1| Like GTP-binding protein [Lactobacillus vini DSM 20605]
Length = 297
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 152/249 (61%), Gaps = 3/249 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 4 SGFVAIIGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTTDSQVVFIDTPGIH 63
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
+ + + D M+ + + + D ++ +V+A + R D + E + K PI LV+N
Sbjct: 64 KPQSQLGDYMVQAALSTLN-DVDAVLFMVNATQKRGRGDNFIIERL--KKVNQPIFLVIN 120
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D ++P ++ +E + + D E+ P+SA G E++ + LP GP YYP D +
Sbjct: 121 KIDQVQPNDLLPFVEDFRQALDFREIYPISALEGINCEELLGAVTNLLPAGPQYYPADQI 180
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
++HPERF V E++RE++ R EVP++ V + + K +Q IVVE++SQK I
Sbjct: 181 TDHPERFIVAELVREQVLKLTRQEVPHSVAVVTEKIQRQDQQKVLVQATIVVERSSQKGI 240
Query: 355 LIGKVSPFL 363
LIG+ L
Sbjct: 241 LIGRGGKML 249
>gi|336398031|ref|ZP_08578831.1| GTP-binding protein Era-like-protein [Prevotella multisaccharivorax
DSM 17128]
gi|336067767|gb|EGN56401.1| GTP-binding protein Era-like-protein [Prevotella multisaccharivorax
DSM 17128]
Length = 298
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 158/252 (62%), Gaps = 15/252 (5%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 3 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + + M++ SA +AD ++ + D ++PE+ + LE+ + K+P+L++
Sbjct: 63 VL-KPNYKMQEFMLQFSESALADADILLYVTDVVESPEKNMDFLEKVA---QMKIPVLVL 118
Query: 233 LNKKDLIKP-------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
+NK D +K GEI +K W+E F + E++PVSA G++ + I LP
Sbjct: 119 INKIDELKGDNSTERLGEIVEK--WHELFPNA-EILPVSAANKFGIDMLMKRIKELLPES 175
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
PAY+ KD +++ P +FFV EIIREKI Y E+PY+ +V V +K +I I
Sbjct: 176 PAYFDKDQLTDKPAKFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDEHHIYINAVIY 234
Query: 346 VEKNSQKIILIG 357
VE++SQK I+IG
Sbjct: 235 VERDSQKGIIIG 246
>gi|94970562|ref|YP_592610.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345]
gi|94552612|gb|ABF42536.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345]
Length = 324
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 151/246 (61%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY-QMILYDTPG 172
+SG+V+++G+PN GKSTL N ++G+K++IVT+KPQTTR+RI GI + P+ Q++L DTPG
Sbjct: 4 RSGFVSIIGRPNAGKSTLLNALVGEKIAIVTHKPQTTRNRIQGIVTVPKKGQIVLVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ K L+ MM+ V A D ++ + D E+ DE V K P++L+
Sbjct: 64 V-HKPDKTLNKRMMQEVYDALEGCDLLLYIHDVTHKFEKEDEYTLSLV--KKTGQPVMLL 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DLI ++ + + + D E+IP+SA G G++ +R +L LP+GP Y+P D
Sbjct: 121 LNKIDLIAKPKLLEIITQFSTLHDFKEIIPISAAKGSGLDILRKKVLQSLPVGPHYFPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERF EIIRE++ + EVPYA V V ++ + + I I VE++ QK
Sbjct: 181 QITDQPERFLAAEIIREQVLVCAHQEVPYATTVMVEQWEEKRSLTK-IAAAIFVERDGQK 239
Query: 353 IILIGK 358
I+IG+
Sbjct: 240 AIIIGR 245
>gi|313892377|ref|ZP_07825969.1| ribosome biogenesis GTPase Era [Dialister microaerophilus UPII
345-E]
gi|313119236|gb|EFR42436.1| ribosome biogenesis GTPase Era [Dialister microaerophilus UPII
345-E]
Length = 301
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 152/259 (58%), Gaps = 23/259 (8%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++A++G+PNVGKSTL N ++G+K+SIV+ QTTR++I G+ +G Q++ DTPG+
Sbjct: 9 SGFIALVGRPNVGKSTLLNTVLGEKISIVSAHAQTTRNKITGVWNGENSQIVFLDTPGM- 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADC---IVVLVDACKAPERIDEILEEGVGDH-------K 224
H S + + +R + ++A IVV++ AC P G GD
Sbjct: 68 ----HKPKSKLGEVIRQSTVDAIGEVDIVVMICACDDPP--------GAGDRYLLSLLEN 115
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K P++LVLNK DL+ I KK++ Y + + E+IPVSA+ G ++++ + LP
Sbjct: 116 KKTPVVLVLNKIDLVSEVAILKKIKQYSQMYNFKEIIPVSAQTGRNMDELMQVLEKMLPE 175
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP Y+P D++++ PER V EI+REKI ++ E+P+A V +K R K +I+ I
Sbjct: 176 GPKYFPDDMITDQPERIIVQEIVREKILLRTHEEIPHAIGVFTEEFKVRENGKVYIRCTI 235
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE+ SQK I+IG L
Sbjct: 236 YVERESQKRIVIGSKGSLL 254
>gi|408411641|ref|ZP_11182779.1| GTP-binding protein Era [Lactobacillus sp. 66c]
gi|407874189|emb|CCK84585.1| GTP-binding protein Era [Lactobacillus sp. 66c]
Length = 303
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 149/247 (60%), Gaps = 6/247 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q + DTPG
Sbjct: 9 HKSGFVALIGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKIFGIYTEDDMQAVFVDTPG 68
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPILL 231
I K LD M K SA + D ++ +VDA KA + + + G K+ ++P+ L
Sbjct: 69 IF-KSHSDLDEYMDKASLSALNDVDLVLFMVDAKKAGKGEEYV----AGLLKNVEVPVFL 123
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P ++ ++ Y+ D E +P+SA G+GV+D+ I LP GP YY
Sbjct: 124 VINKIDQVHPNDLLPIIDSYQAVGDFAEFLPISASQGNGVDDLLKTIKDYLPEGPQYYAS 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V++ PE F V E+IRE+I EVP++ V V R K + I VEK+ Q
Sbjct: 184 DEVTDRPEYFVVAEMIREQILRLTGQEVPHSTAVWVEQMNERINGKLQVNATIYVEKDGQ 243
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 244 KRIIIGK 250
>gi|329121358|ref|ZP_08249984.1| GTP-binding protein Era [Dialister micraerophilus DSM 19965]
gi|327469767|gb|EGF15233.1| GTP-binding protein Era [Dialister micraerophilus DSM 19965]
Length = 307
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 152/259 (58%), Gaps = 23/259 (8%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++A++G+PNVGKSTL N ++G+K+SIV+ QTTR++I G+ +G Q++ DTPG+
Sbjct: 15 SGFIALVGRPNVGKSTLLNTVLGEKISIVSAHAQTTRNKITGVWNGENSQIVFLDTPGM- 73
Query: 175 EKKIHMLDSMMMKNVRSAGINADC---IVVLVDACKAPERIDEILEEGVGDH-------K 224
H S + + +R + ++A IVV++ AC P G GD
Sbjct: 74 ----HKPKSKLGEVIRQSTVDAIGEVDIVVMLCACDDPP--------GAGDRYLLSLLEN 121
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K P++LVLNK DL+ I KK++ Y + + E+IPVSA+ G ++++ + LP
Sbjct: 122 KKTPVVLVLNKIDLVSEVAILKKIKQYSQMYNFKEIIPVSAQTGRNMDELMQVLEKMLPE 181
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP Y+P D++++ PER V EI+REKI ++ E+P+A V +K R K +I+ I
Sbjct: 182 GPKYFPDDMITDQPERIIVQEIVREKILLRTHEEIPHAIGVFTEEFKVRENGKVYIRCTI 241
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE+ SQK I+IG L
Sbjct: 242 YVERESQKRIVIGSKGSLL 260
>gi|239827759|ref|YP_002950383.1| GTP-binding protein Era [Geobacillus sp. WCH70]
gi|239808052|gb|ACS25117.1| GTP-binding protein Era [Geobacillus sp. WCH70]
Length = 302
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 155/248 (62%), Gaps = 4/248 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR++I G+ + + Q+I DTP
Sbjct: 5 GYKSGFVSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ + K H L MMK +A D I+ +++A + R D + E + P+ L
Sbjct: 65 GMHKPK-HKLGDFMMKVALNALREVDLILFMINAEEGFGRGDAFIIEQL--KAVNTPVFL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D + P ++ ++ Y+ E+IP+SA G+ +E + + I LP GP YYP
Sbjct: 122 VINKIDKVHPDDLLPLIDQYKDLYPFAEIIPISALQGNNIETLVEQIKKYLPEGPQYYPP 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNS 350
D +++HPERF + E+IREK R EVP++ V V + + R + ++ I+VE++S
Sbjct: 182 DQITDHPERFIIAELIREKALHLTREEVPHSIAVVVETIERREDSDTVYVGAVIIVERDS 241
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 242 QKGIIIGK 249
>gi|334133801|ref|ZP_08507343.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF7]
gi|333608650|gb|EGL19940.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF7]
Length = 299
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 147/250 (58%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL NQ+IGQK++I+++KPQTTR++I G+ + Q++ DTPGI
Sbjct: 7 KSGFVSIIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTDNSQIVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L MMK S D I+ L D + D + E + + K P++LVL
Sbjct: 67 -HKPSSKLGDYMMKVAHSTLGEVDAILFLADVSEGIGGGDRYIIEQLKNVKT--PVILVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ + Y+ + E++PVSA G+ V + + ++ LP GP YYP D
Sbjct: 124 NKIDQVHPEQLLPIITTYKDLYEFAEIVPVSALLGNNVNTMLEQVVKYLPEGPQYYPADQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE+F E++REKI R E+P++ V + K I I VE++SQK
Sbjct: 184 ITDHPEQFVCAELVREKILHMTREEIPHSIAVAIEDMKVEKNGVVHISAVIYVERDSQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKQGSLL 253
>gi|421491157|ref|ZP_15938524.1| GTP-binding protein Era [Streptococcus anginosus SK1138]
gi|400372154|gb|EJP25103.1| GTP-binding protein Era [Streptococcus anginosus SK1138]
Length = 299
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KSAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVIIDSMKRDEETDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|303236850|ref|ZP_07323429.1| GTP-binding protein Era [Prevotella disiens FB035-09AN]
gi|302483018|gb|EFL46034.1| GTP-binding protein Era [Prevotella disiens FB035-09AN]
Length = 293
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + + MM+ SA +AD ++ + D + PE+ E LE+ K +P++L+
Sbjct: 62 VL-KPNYKMQEMMLHFSESALADADILLYVTDVIEKPEKNSEFLEKVA---KMDIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + +E + E++P+SAK G + + I LP PAY+ KD
Sbjct: 118 INKIDESDQKTVVELVEKWHTLLPKAEILPLSAKNKFGTDALMHRIQELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK
Sbjct: 178 QLTDKPAKFFVTEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAIIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|319939220|ref|ZP_08013583.1| GTP-binding protein Era [Streptococcus anginosus 1_2_62CV]
gi|319811616|gb|EFW07892.1| GTP-binding protein Era [Streptococcus anginosus 1_2_62CV]
Length = 299
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVSADENRGKGDDMIMERL--KVAKVPVVLVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ Y K D EV+P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDYRKQMDFKEVVPISALQGNNVSHLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVRIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|347761797|ref|YP_004869358.1| GTP-binding protein [Gluconacetobacter xylinus NBRC 3288]
gi|347580767|dbj|BAK84988.1| GTP-binding protein [Gluconacetobacter xylinus NBRC 3288]
Length = 305
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q++L DTPGI
Sbjct: 12 RCGFVAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRQRTQILLVDTPGI 71
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K LD M+ + +AD +++VDA + + + K +L LVL
Sbjct: 72 FQPK-RKLDRAMVAAAWTGSDDADITLLIVDARAGMTDALRAIATRLAEQKRRL--WLVL 128
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+K + V+ V VSA+ G GV+D+ D + LP GP YP+D
Sbjct: 129 NKTDLVKRDTLLPLTAELSSILPVEHVFMVSARSGEGVDDLLDRLAVALPTGPYLYPEDD 188
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R E++RE+IF+Q EVPYA V +++ RP I+V I V + S K
Sbjct: 189 LTDLPDRLLAAELVREQIFLQTHEEVPYAATVETEAFQERPDGSVRIEVTIYVARASHKA 248
Query: 354 ILIGK 358
ILIG+
Sbjct: 249 ILIGE 253
>gi|347542288|ref|YP_004856924.1| GTP-binding protein Era [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985323|dbj|BAK80998.1| GTP-binding protein Era [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 294
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 147/252 (58%), Gaps = 4/252 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+ NVGKSTL N I QKLSIV++KPQTTR+ ++GI + YQ+I DTPG
Sbjct: 2 HKSGFVSIIGRANVGKSTLLNNFINQKLSIVSSKPQTTRNNVIGILNDENYQIIFTDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
K + L + M+K++ D I+ + + K R+D + E + D +P + V
Sbjct: 62 Y-HKPRYKLGNYMIKSISDGLKETDIIIFVANIRKEIPRLDLEILEKIKDFN--IPKIFV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D I +I L Y K D +E IP+SA G V+ + IL LP GP YY D
Sbjct: 119 LNKCDEINSKDIMDVLSRYSKILDFNEYIPISALNGKNVDKLLGLILKYLPNGPKYYDSD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
++ + E+FF+ EI+REKI R+EVP+ V +VS K K + I+ I +K +
Sbjct: 179 QMAANNEKFFISEIVREKILKLIRDEVPHGVGVEIVSMKYDDEKKKYNIEGNIFCDKETH 238
Query: 352 KIILIGKVSPFL 363
K+I+IGK L
Sbjct: 239 KVIIIGKNGEML 250
>gi|427385444|ref|ZP_18881751.1| GTP-binding protein Era [Bacteroides oleiciplenus YIT 12058]
gi|425727088|gb|EKU89949.1| GTP-binding protein Era [Bacteroides oleiciplenus YIT 12058]
Length = 293
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 154/246 (62%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + + +SM+ + SA +AD ++ + D + P++ +E +E+ G ++P+LL+
Sbjct: 62 VLKPQYKLQESMLNFST-SALTDADVLLYVTDVVETPDKHNEFVEKVAG---MEIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E ++ E+IP+SA V+ + + LP P Y+ KD
Sbjct: 118 INKIDLSNQEKLVELVEAWKALLPNAEIIPISATTKFNVDYVMKRVKELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y EVPY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEVPYSVEVVVEQFK-EDAKKIHISAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|322391812|ref|ZP_08065277.1| GTP-binding protein Era [Streptococcus peroris ATCC 700780]
gi|321145292|gb|EFX40688.1| GTP-binding protein Era [Streptococcus peroris ATCC 700780]
Length = 299
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIMERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSHLVDILSDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEVPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKQGAML 251
>gi|297617800|ref|YP_003702959.1| GTP-binding protein Era [Syntrophothermus lipocalidus DSM 12680]
gi|297145637|gb|ADI02394.1| GTP-binding protein Era [Syntrophothermus lipocalidus DSM 12680]
Length = 294
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 145/250 (58%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+ +++G+PNVGKST N +IGQK++IV+ KPQTTR+RI GI + + Q+I DTPGI
Sbjct: 4 KSGFASIVGRPNVGKSTFLNTVIGQKVAIVSEKPQTTRNRIQGIYTCEQGQIIFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ H L M++ + AD ++ +V A E+ DE + E + K P+ LV+
Sbjct: 64 -HRPRHKLGEYMVRTAHATAREADVVLYMVSAKDGMEKGDEEIIEFL--TKTSAPVFLVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ E+++ + + E P+SA G V + IL LP+GP YYP D
Sbjct: 121 NKIDLVDQDEVSRCIGSFHSRFRFAETWPISAIMGTNVHALIRKILDYLPVGPYYYPPDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
V++ PERF V E+IREK R EVP++ V V K R +++ + E++SQK
Sbjct: 181 VTDQPERFIVAELIREKALYFTREEVPHSLAVEVEEMKERKGNTVYVRAVVFTERDSQKA 240
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 241 IVIGKSGSML 250
>gi|282860195|ref|ZP_06269269.1| GTP-binding protein Era [Prevotella bivia JCVIHMP010]
gi|424899683|ref|ZP_18323225.1| GTP-binding protein Era [Prevotella bivia DSM 20514]
gi|282587016|gb|EFB92247.1| GTP-binding protein Era [Prevotella bivia JCVIHMP010]
gi|388591883|gb|EIM32122.1| GTP-binding protein Era [Prevotella bivia DSM 20514]
Length = 293
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 153/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDAQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K ++P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADVLLYVTDVVEKPEKNMDFLEKVA---KMQIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + ++ + +E + E++P+SA+ G++ + I LP PA++ KD
Sbjct: 118 INKIDESEQQKLGELVEKWHSLLPNAEILPISAQNKFGIDILLKRIYELLPESPAFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y E+PYA +V V +K + I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEIPYAVEVVVERFK-EDDKQIHINAVIYVERSSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|342217317|ref|ZP_08709964.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341588207|gb|EGS31607.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 295
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 150/252 (59%), Gaps = 4/252 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N+++G+KLSI +NKPQTTR++I I + E Q+I DTPGI
Sbjct: 2 KSGFVTIIGRPNVGKSTLINRIVGEKLSITSNKPQTTRNKIQLIHTTEEAQIIFMDTPGI 61
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+K + L + M+ R D I +VDA K +D+ + + + K K PILL++
Sbjct: 62 -QKPKNKLGTYMLGVSRETLGEVDVITAMVDASKKIGAMDQWIFKELEGFKGKTPILLLI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I +I ++ Y K +E+IP+SA G +E+ + LP GP Y+P D+
Sbjct: 121 NKIDEIPKPDILPLIDQYAKLNLFEEIIPISAINGDNIEEYLSALEGFLPEGPQYFPDDM 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQ 351
+++ PE+F V E IREK + EVP+ V V S K R K+ + +E I VE+ S
Sbjct: 181 ITDQPEKFIVAEFIREKALENLQEEVPHGVMVVVESMKMREN-KNLMDIEATIFVERKSH 239
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 240 KGIIIGKSGSML 251
>gi|398831536|ref|ZP_10589714.1| GTP-binding protein Era [Phyllobacterium sp. YR531]
gi|398212243|gb|EJM98852.1| GTP-binding protein Era [Phyllobacterium sp. YR531]
Length = 312
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG++A++G PN GKSTL NQ++G K+SIVT+K QTTR + GI + QM+L DTPGI
Sbjct: 19 RSGFIALIGAPNAGKSTLVNQLVGSKVSIVTHKVQTTRALVRGIVIHEQTQMVLVDTPGI 78
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K LD M+ +AD I+VL+D + + EIL E + D K K ++LVL
Sbjct: 79 FKPK-RRLDRAMVTTAWGGAKDADLILVLIDVEQGIDDEAEILLESLRDKKRK--VILVL 135
Query: 234 NKKDLIKPG---EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
NK D I+ E+AKK KF D+ +SA G+G +D+ ++ LP GP YYP
Sbjct: 136 NKVDRIEAPMLLELAKKANEKVKF---DQTFMISALKGYGCKDLLKYLAENLPEGPWYYP 192
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
+D +S+ P R EI REK++++ NE+PY+ V S++ + IQ I VE++S
Sbjct: 193 EDQISDMPMRMLAAEITREKLYLRLHNELPYSSTVETESWEEKKDGSVRIQQVIYVERDS 252
Query: 351 QKIILIG 357
QK I++G
Sbjct: 253 QKKIVLG 259
>gi|384135808|ref|YP_005518522.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289893|gb|AEJ44003.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 298
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 151/253 (59%), Gaps = 4/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VA++G+PNVGKSTL N ++G K++I++++PQTTR+RI G+ + QMI DTP
Sbjct: 2 TYKSGFVALIGRPNVGKSTLLNALVGHKVAIMSSRPQTTRNRIRGVRTTETSQMIFIDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+ D IV++VDA + + + + + + P++L
Sbjct: 62 GIHKPK-HRLGEYMVDAALKTLNEVDVIVMVVDASSPVHPTEHEIAKQL--ERVRTPVIL 118
Query: 232 VLNKKDLIKP-GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LNK D ++ + K++E Y+ DE +P+SA G V+ + + I +LP GP YYP
Sbjct: 119 ALNKVDALEDRALVLKRIEEYQALRPFDEYVPISALRGEQVDLLAEIIEKRLPEGPKYYP 178
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D++++ PE F + EI+REK+ + R+EVP++ V V + R + ++ I E+ S
Sbjct: 179 DDMITDQPESFIISEIVREKVLLLTRDEVPHSVMVAVEHMERRSSDTLYVSAVIYTERES 238
Query: 351 QKIILIGKVSPFL 363
QK ILIGK L
Sbjct: 239 QKAILIGKQGQML 251
>gi|381184009|ref|ZP_09892687.1| GTPase Era [Listeriaceae bacterium TTU M1-001]
gi|380316096|gb|EIA19537.1| GTPase Era [Listeriaceae bacterium TTU M1-001]
Length = 301
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 153/251 (60%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL NQ+IGQK++I+++K QTTR+++ G+ + + Q++ DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNQIIGQKIAIMSDKAQTTRNKVQGVYTEDDAQVVFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKVALNTFREVDLIYFVIDAESGFGRGDEFIIEKLKNVET--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ + + +E Y+ D E+IP+SA G V ++ L GP YYPKD
Sbjct: 123 NKIDLVSKERLVELIEQYKDLLDFAEIIPISALEGEEVPNLLAETKNYLDEGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTIMATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>gi|224535782|ref|ZP_03676321.1| hypothetical protein BACCELL_00646 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226010|ref|ZP_17212476.1| GTP-binding protein Era [Bacteroides cellulosilyticus CL02T12C19]
gi|224522602|gb|EEF91707.1| hypothetical protein BACCELL_00646 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630867|gb|EIY24848.1| GTP-binding protein Era [Bacteroides cellulosilyticus CL02T12C19]
Length = 293
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 154/246 (62%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + + +SM+ + SA +AD ++ + D + P++ +E +E+ + ++P+LL+
Sbjct: 62 VLKPQYKLQESMLNFST-SALTDADVLLYVTDVVETPDKHNEFIEKVA---RMEIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E ++ E+IP+SA VE + + LP P Y+ KD
Sbjct: 118 INKIDLSNQEKLVELVEAWKALLPNAEIIPISATTKFNVEYVMKRVKELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EDAKKIHINAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|373455525|ref|ZP_09547356.1| GTP-binding protein Era [Dialister succinatiphilus YIT 11850]
gi|371934787|gb|EHO62565.1| GTP-binding protein Era [Dialister succinatiphilus YIT 11850]
Length = 302
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 155/257 (60%), Gaps = 19/257 (7%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+ A+LG+PNVGKSTL N ++G+K+SIV+ QTTR++I G+ +G Q++ DTPG+
Sbjct: 10 SGFAALLGRPNVGKSTLMNALLGEKISIVSAHAQTTRNKITGVWNGDNAQVVFLDTPGM- 68
Query: 175 EKKIHMLDSMMMKNVRSAGINA-DCIVVLVDACKAPERIDEILEEGVGDH------KD-K 226
H S + + +R + ++A D + ++V C + + G GD KD K
Sbjct: 69 ----HKPQSKLGEAIRQSTMDALDEVDMIVFLCAVNDPL------GAGDRYILSLLKDRK 118
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
+P++L L+K DLI E+ KK+ Y K E+IP+SAK G ++++ ++ +P GP
Sbjct: 119 VPVILALSKTDLISKEEVLKKIVQYSKIYPFAEIIPLSAKTGENLDELMKCVVKYMPEGP 178
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
Y+P D+V++ PER V EI+REK+ + R+EVP+A V + R K +I+ I V
Sbjct: 179 KYFPDDMVTDQPERNIVQEIVREKLLTRTRDEVPHAIGVYTEEFSERENGKVYIRCTIYV 238
Query: 347 EKNSQKIILIGKVSPFL 363
E++SQK I+IGK L
Sbjct: 239 ERDSQKRIIIGKKGSVL 255
>gi|452992448|emb|CCQ96073.1| GTP-binding protein [Clostridium ultunense Esp]
Length = 301
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 148/251 (58%), Gaps = 5/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL NQM+G K++I+++KPQTTR+RI GI + E Q+I DTPGI
Sbjct: 9 KSGFVALIGRPNVGKSTLMNQMVGTKIAIMSDKPQTTRNRIRGILTREEGQIIFLDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILLV 232
+ + M MMK V + D +++L+D R DE I+ G +PI+LV
Sbjct: 69 HKPRTRM-GQYMMKVVDQSIREVDLLLLLIDVEAGIGRGDEEIMNRLKGT---SIPIILV 124
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D I P + ++ F E+IPVSA G+ VE + + LP GP Y+P D
Sbjct: 125 LNKIDKIAPEALLPLIDHVRHFLSFAEIIPVSALNGNNVEHLIQTLYRYLPEGPYYFPPD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ PE F VGE+IREK + R EVP++ V + Y R +I+ + E+ SQK
Sbjct: 185 RKTDQPETFLVGELIREKALNRLREEVPHSIAVEIEEYAEREHGTLYIRAVLYCERESQK 244
Query: 353 IILIGKVSPFL 363
ILIGK L
Sbjct: 245 GILIGKEGKML 255
>gi|116626742|ref|YP_828898.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076]
gi|116229904|gb|ABJ88613.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076]
Length = 304
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 147/245 (60%), Gaps = 5/245 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+V+++G+PN GKSTL N ++GQK++IV +KPQTTR I G+ + PE Q++ DTPG
Sbjct: 6 RSGFVSLIGRPNAGKSTLLNALVGQKVAIVADKPQTTRTSIQGVLTLPEAQIVFADTPG- 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
I K L+ +M VR A D ++ + DA + D + HK P++LVL
Sbjct: 65 IHKADTPLNKRLMDTVRGALEERDLLLFVADATRKFNEDDRRAIDIARRHKT--PVVLVL 122
Query: 234 NKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+K + +E Y+ + E +PVS+ G++ +R IL LP+GPAY+P+D
Sbjct: 123 NKIDLLKDKAHLLPLIEEYKAVFEFTEYVPVSSVKKIGLDQLRAVILKYLPVGPAYFPED 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
V++ PERF E+IREK+ + R EVP+A V V ++ P I I +E++ QK
Sbjct: 183 YVTDQPERFLAAELIREKVLLATRQEVPHAVAVTVDRWEETPKITR-IYATIHLERDGQK 241
Query: 353 IILIG 357
I+IG
Sbjct: 242 AIVIG 246
>gi|418962197|ref|ZP_13514072.1| GTP-binding protein Era [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383346255|gb|EID24316.1| GTP-binding protein Era [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 299
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVSADEKRGKGDDMIMERL--KVAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ Y K D EV+P+S G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPNQLLSQIDDYRKQMDFKEVVPISVLQGNNVSHLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|295695440|ref|YP_003588678.1| GTP-binding protein Era [Kyrpidia tusciae DSM 2912]
gi|295411042|gb|ADG05534.1| GTP-binding protein Era [Kyrpidia tusciae DSM 2912]
Length = 300
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 147/255 (57%), Gaps = 11/255 (4%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A +SG+ A++G+PNVGKSTL N++IG K++I+++KPQTTR+RI G+ + Q+I
Sbjct: 2 ADSSGFRSGFAALVGRPNVGKSTLLNRLIGTKIAIMSDKPQTTRNRIRGVLTRENGQVIF 61
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK--APERIDEILEEGVGDHKD 225
DTPG+ K H L M + + D ++ ++D P E+ + DH
Sbjct: 62 LDTPGVHRPK-HRLGDYMNRLALATLQEVDLVLFVIDVTSKFGPG------EQVILDHLQ 114
Query: 226 KL--PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
+ P+ LV+NK DL+ P E+ ++ + K EV+PVSA G ++ + + I LP
Sbjct: 115 GVETPVFLVINKIDLVSPEELLPMIDEHRKRYPFREVVPVSAVKGTNLDRLEERIFATLP 174
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GPAYYP D V++HPE F V E++RE++ R EVP++ V V R +I+
Sbjct: 175 QGPAYYPADQVTDHPESFIVAELVREQVLNLTREEVPHSVAVTVEEITPRENGLLYIRAV 234
Query: 344 IVVEKNSQKIILIGK 358
+V EK SQK ILIG+
Sbjct: 235 VVTEKESQKAILIGR 249
>gi|402831476|ref|ZP_10880159.1| GTP-binding protein Era [Capnocytophaga sp. CM59]
gi|402281874|gb|EJU30492.1| GTP-binding protein Era [Capnocytophaga sp. CM59]
Length = 292
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 155/245 (63%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRI GI SG ++Q+I DTPG
Sbjct: 2 HKSGFVNIIGNPNVGKSTLLNALVGERLSIITSKAQTTRHRIFGIVSGEDFQVIFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+ A +AD ++ +++ + + +E ++ ++ K+P+L++
Sbjct: 62 II-KPAYQLQASMMDFVKDAFEDADILIYMIEIGEKDLKDEEFFKK---INQAKVPVLVL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + L ++++ E+ +SA VE + IL LP PA+YPKD
Sbjct: 118 INKIDRSDEATVKEALAYWQEKVPKGEIYAISALENFNVEPLFHRILELLPESPAFYPKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI + Y+ EVPY+ +V ++ I+ I+VE+ SQK
Sbjct: 178 QLTDKPERFFVNETIREKILLNYKKEVPYSVEVETETFSETEEIIR-IRSIIMVERESQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|347520837|ref|YP_004778408.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385832200|ref|YP_005869975.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|420143626|ref|ZP_14651123.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
gi|343179405|dbj|BAK57744.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343181353|dbj|BAK59691.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|391856497|gb|EIT67037.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
Length = 303
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 154/251 (61%), Gaps = 4/251 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + + Q+I
Sbjct: 2 TNNTFKSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKPQTTRNKIQGIYTTDKEQIIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+++ S D ++ +V A + + ++ E + +P
Sbjct: 62 DTPGI-HKPHNALGDFMVQSAYSTLRECDMVLFMVAADEPRSTGENMIIERL--KTADVP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++LV+NK D + P + + + Y D EV+P+SA G+ E + + + KL GP Y
Sbjct: 119 VILVVNKIDKVHPDALFETVSDYTSQMDFAEVVPISALQGNNTERLLETLSNKLEEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVE 347
+P+D+V++HPERF V E+IREKI + R EVP++ V S K T K I I+VE
Sbjct: 179 FPEDMVTDHPERFLVSEMIREKILLLTREEVPHSIAVTTDSMKRDEETGKIHIMATIIVE 238
Query: 348 KNSQKIILIGK 358
+ SQK I++GK
Sbjct: 239 RKSQKGIILGK 249
>gi|359406191|ref|ZP_09198900.1| ribosome biogenesis GTPase Era [Prevotella stercorea DSM 18206]
gi|357556609|gb|EHJ38198.1| ribosome biogenesis GTPase Era [Prevotella stercorea DSM 18206]
Length = 293
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNEEDAQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + PE+ + L++ + +P+LL+
Sbjct: 62 VLKPNYKLQESMLAFS-ESALQDADVLLYVTDVVENPEKNQDFLDKV---KRMTIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + + E++P+SAK GV+ + I LP P ++ KD
Sbjct: 118 INKIDQSDQKTLGDTVERWHQLLPNAEILPISAKNKFGVDMLMRRIKELLPDSPPFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y E+PY+ +V V S+K D I I VE++SQK
Sbjct: 178 QLTDKPARFFVSEIIREKILLYYDKEIPYSVEVKVESFKETDKHID-IHAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|347525599|ref|YP_004832347.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 27782]
gi|345284558|gb|AEN78411.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 27782]
Length = 300
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 144/237 (60%), Gaps = 3/237 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++A+LG+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 7 SGFIAILGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTDDAQIVFIDTPGI- 65
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L M+++ S D ++ +V+A + R D+ + E + + K PI L +N
Sbjct: 66 HKPQSRLGDFMVESALSTLNEVDAVIFMVNAEQKRGRGDDFIIERLKNVKK--PIYLAIN 123
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D I P + + ++ Y D +V P+SA G+ ++ D ++ LP GP YYP D V
Sbjct: 124 KIDRIHPDHLLEVMDDYRGALDFKDVFPISALQGNNCQEFIDTLIKDLPEGPQYYPTDQV 183
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++HPERF GE+IREK+ R EVP++ V V K R K IQ I+VE+ SQ
Sbjct: 184 TDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIKRRDEGKILIQATIIVERASQ 240
>gi|445115592|ref|ZP_21378288.1| GTP-binding protein Era [Prevotella nigrescens F0103]
gi|444840359|gb|ELX67393.1| GTP-binding protein Era [Prevotella nigrescens F0103]
Length = 293
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K ++P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADILLYVTDVIEKPEKNTDFLEKVA---KMQIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + E++P+SAK G + + I LP PAY+ KD
Sbjct: 118 INKIDESDQKTLVALVEKWHGLLPKAEILPISAKNKFGTDVLMKRIKELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|336053995|ref|YP_004562282.1| GTP-binding protein Era [Lactobacillus kefiranofaciens ZW3]
gi|333957372|gb|AEG40180.1| GTP-binding protein Era [Lactobacillus kefiranofaciens ZW3]
Length = 301
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 146/253 (57%), Gaps = 10/253 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I ++KPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSSKPQTTRNRISGIYTSDQMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLV---DACKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V D K + I +L+E +P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEDIGKGDQYIASLLKEVT------VPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIIDSYNKLDGFKEILPISATQGIGIEDLLKTIKQYLPEGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VEK+
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLLIEATIYVEKDG 239
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 QKGIIIGKAGKML 252
>gi|389815824|ref|ZP_10207072.1| GTP-binding protein Era [Planococcus antarcticus DSM 14505]
gi|388465547|gb|EIM07863.1| GTP-binding protein Era [Planococcus antarcticus DSM 14505]
Length = 305
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 154/255 (60%), Gaps = 11/255 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKST N+++GQK++I+++KPQTTR+++ G+ + + QM+ DTPGI
Sbjct: 9 KSGFISIIGRPNVGKSTFLNRVVGQKIAIMSDKPQTTRNKVQGVVTTNDSQMVFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVL---VDACKAPERIDEILEEGVGDHKDKLPIL 230
E + H L M+K ++ D ++ + +D +R + +G+ +P+
Sbjct: 69 NEPR-HKLGDFMLKVAKNTFREVDVLLFVASGIDRVGKEDRYVLEMLKGI-----DVPVF 122
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D + P + K +E Y D E IP+SA G+ VE + I +LP GP YYP
Sbjct: 123 LVINKIDQVHPDNLPKIIESYRNEFDFAEAIPISALEGNNVETLLAKINERLPEGPQYYP 182
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEK 348
D +++HPERF + E+IREK R E+P++ V + KD I+++ I+VE+
Sbjct: 183 ADQITDHPERFIISELIREKALHLTREEIPHSIAVVIEKIAPDSENKDMIRIQATIMVER 242
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 243 DSQKGIVIGKKGVLL 257
>gi|325268711|ref|ZP_08135340.1| GTP-binding protein Era [Prevotella multiformis DSM 16608]
gi|324988955|gb|EGC20909.1| GTP-binding protein Era [Prevotella multiformis DSM 16608]
Length = 293
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 152/246 (61%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDAQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADVLLYVTDVIENPEKNMDFLEKVA---KMTIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D ++ + +E W+ D E++P+SAK G + + + LP PA++ K
Sbjct: 118 INKIDESDQSKLVELVEKWHSLLPDA-EILPISAKNKFGTDILMKRVRELLPESPAFFDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P RFFV EIIREKI Y E+PY+ +V V +K + I I VE++SQ
Sbjct: 177 DQLTDKPARFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDDRQIHINAVIYVERSSQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|299141483|ref|ZP_07034619.1| GTP-binding protein Era [Prevotella oris C735]
gi|298576819|gb|EFI48689.1| GTP-binding protein Era [Prevotella oris C735]
Length = 293
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 153/248 (61%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ+IG+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLIGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L++ K K+P+LL+
Sbjct: 62 VLKPNYKM-QEMMLAFSESALTDADILLYVTDVVENPEKNMDFLDKV---KKMKIPVLLL 117
Query: 233 LNK---KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+NK D G+I K W+ + E++P+SAK GV+ + I LP PAY+
Sbjct: 118 VNKIDESDQKTLGDIVTK--WHSLLPNA-EILPLSAKNKFGVDMLLKRIKELLPESPAYF 174
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
KD +++ P +FFV EIIREKI + Y E+PY+ +V V +K + I I VE++
Sbjct: 175 DKDQLTDKPAKFFVSEIIREKILLYYDKEIPYSVEVRVERFKENDSVIH-INAVIYVERD 233
Query: 350 SQKIILIG 357
SQK I+IG
Sbjct: 234 SQKGIIIG 241
>gi|403743343|ref|ZP_10952957.1| GTP-binding protein Era [Alicyclobacillus hesperidum URH17-3-68]
gi|403122866|gb|EJY57058.1| GTP-binding protein Era [Alicyclobacillus hesperidum URH17-3-68]
Length = 297
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 149/255 (58%), Gaps = 13/255 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I++N+PQTTR+RI G+ + QMI DTPG+
Sbjct: 4 KSGFVAIVGRPNVGKSTLLNALVGQKIAIMSNRPQTTRNRIRGVRTTETAQMIFIDTPGV 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILE--EGVGDHKDKLP 228
H L +M+ D I+ +VD A E+ EI++ EGV + P
Sbjct: 64 -HTPHHRLGEVMVDMALQTLGEVDLILFVVDVTSPVHAAEQ--EIIKQLEGV-----RTP 115
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + G I +++ ++ DE +P+SA + + I +LP GP Y
Sbjct: 116 VFLVINKTDAVDKGLILERIAAFQALRSFDEYVPISALRQEQTDLLASLIEERLPEGPKY 175
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D+V+++PE F + EI+REK+ M R EVP++ V + + R + + I E+
Sbjct: 176 YPDDMVTDYPESFIISEIVREKVLMLTREEVPHSVMVAIEHMERRASDTLHVHATIYTER 235
Query: 349 NSQKIILIGKVSPFL 363
+SQK ILIGK L
Sbjct: 236 DSQKGILIGKQGQML 250
>gi|116617891|ref|YP_818262.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|381336368|ref|YP_005174143.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|122271908|sp|Q03Y33.1|ERA_LEUMM RecName: Full=GTPase Era
gi|116096738|gb|ABJ61889.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|356644334|gb|AET30177.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 303
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA A R D+ + + + + K+ PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVVDASMARGRGDDFIIDRLQEVKNT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFT-DVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y+ + EV P+SA G V ++ D I++ L GP Y+ D
Sbjct: 125 NKVDLLAPNDLLDVIASYQNDAPEWAEVFPISATEGDNVPELLDNIVSHLDEGPQYFDAD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKIARENEEKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|450114913|ref|ZP_21863604.1| GTP-binding protein Era [Streptococcus mutans ST1]
gi|449228594|gb|EMC27954.1| GTP-binding protein Era [Streptococcus mutans ST1]
Length = 299
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K LD M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKT-ALDDFMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETNKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IG+ L
Sbjct: 241 GIIIGRQGAML 251
>gi|323340794|ref|ZP_08081046.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 25644]
gi|417974210|ref|ZP_12615032.1| GTPase Era [Lactobacillus ruminis ATCC 25644]
gi|323091917|gb|EFZ34537.1| GTP-binding protein Era [Lactobacillus ruminis ATCC 25644]
gi|346329435|gb|EGX97732.1| GTPase Era [Lactobacillus ruminis ATCC 25644]
Length = 300
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 144/237 (60%), Gaps = 3/237 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++A+LG+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 7 SGFIAILGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTDDAQIVFIDTPGI- 65
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L M+++ S D ++ +V+A + R D+ + E + + K PI L +N
Sbjct: 66 HKPQSRLGDFMVESALSTLNEVDAVIFMVNAEQKRGRGDDFIIERLKNVKK--PIYLAIN 123
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D I P + + ++ Y D +V P+SA G+ ++ D ++ LP GP YYP D V
Sbjct: 124 KIDRIHPDHLLEVMDDYRGALDFKDVFPISALQGNNCQEFIDTLIKDLPEGPQYYPTDQV 183
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++HPERF GE+IREK+ R EVP++ V V K R K IQ I+VE+ SQ
Sbjct: 184 TDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIKRRDEEKILIQATIIVERASQ 240
>gi|335996721|ref|ZP_08562638.1| GTP-binding protein Era [Lactobacillus ruminis SPM0211]
gi|335351791|gb|EGM53282.1| GTP-binding protein Era [Lactobacillus ruminis SPM0211]
Length = 300
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 144/237 (60%), Gaps = 3/237 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++A+LG+PNVGKST N++IGQK++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 7 SGFIAILGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTDDAQIVFIDTPGI- 65
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L M+++ S D ++ +V+A + R D+ + E + + K PI L +N
Sbjct: 66 HKPQSRLGDFMVESALSTLNEVDAVIFMVNAEQKRGRGDDFIIERLKNVKK--PIYLAIN 123
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D I P + + ++ Y D +V P+SA G+ ++ D ++ LP GP YYP D V
Sbjct: 124 KIDRIHPDHLLEVMDDYRGALDFKDVFPISALQGNNCQEFIDTLIEDLPEGPQYYPTDQV 183
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++HPERF GE+IREK+ R EVP++ V V K R K IQ I+VE+ SQ
Sbjct: 184 TDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIKRRDEEKILIQATIIVERASQ 240
>gi|153810738|ref|ZP_01963406.1| hypothetical protein RUMOBE_01122 [Ruminococcus obeum ATCC 29174]
gi|149833134|gb|EDM88216.1| ribosome biogenesis GTPase Era [Ruminococcus obeum ATCC 29174]
Length = 302
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 148/257 (57%), Gaps = 11/257 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+ A++G+PNVGKSTL N +IGQK++I + KPQTTR+RI + + + Q++ DTP
Sbjct: 4 NFKSGFTAIIGRPNVGKSTLMNHLIGQKIAITSKKPQTTRNRIQTVYTCEDGQIVFLDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLP 228
GI + K + L M++ + D I+ LV+ A ER I E+ G H LP
Sbjct: 64 GIHKAK-NKLGEYMVQVAERTLKDVDVILWLVEPTTFIGAGER--HIAEQLKGLH---LP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++LV+NK D + EI K ++ Y K D DE+IP SA EDI IL LP GP +
Sbjct: 118 VILVINKVDTVDKDEILKAIDTYRKLYDFDEIIPCSALRNQNTEDIIPCILKYLPYGPMF 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVV 346
Y +D V++ P+R EIIREK E+P+ V + + K RP + + +E I+
Sbjct: 178 YDEDTVTDQPQRQIAAEIIREKALHALDAEIPHGIAVAIDTMKERPGKRQLVDIEATIIC 237
Query: 347 EKNSQKIILIGKVSPFL 363
E++S K I+IGK L
Sbjct: 238 ERDSHKGIIIGKQGAML 254
>gi|15672333|ref|NP_266507.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis Il1403]
gi|125623240|ref|YP_001031723.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris MG1363]
gi|281490898|ref|YP_003352878.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis KF147]
gi|385829924|ref|YP_005867737.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis CV56]
gi|389853568|ref|YP_006355812.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris NZ9000]
gi|418038565|ref|ZP_12676894.1| hypothetical protein LLCRE1631_01701 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|61223689|sp|P0A3C1.1|ERA_LACLA RecName: Full=GTPase Era
gi|61223690|sp|P0A3C2.1|ERA_LACLM RecName: Full=GTPase Era
gi|8163994|gb|AAF73946.1|AF233268_1 GTP-binding protein Era [Lactococcus lactis subsp. cremoris MG1363]
gi|12723220|gb|AAK04449.1|AE006272_3 GTP-binding protein Era [Lactococcus lactis subsp. lactis Il1403]
gi|124492048|emb|CAL96976.1| GTP-binding protein era homolog [Lactococcus lactis subsp. cremoris
MG1363]
gi|281374656|gb|ADA64176.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis KF147]
gi|300069990|gb|ADJ59390.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris NZ9000]
gi|326405932|gb|ADZ63003.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis CV56]
gi|354693213|gb|EHE92990.1| hypothetical protein LLCRE1631_01701 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672428|dbj|BAL50319.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis IO-1]
Length = 303
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 152/246 (61%), Gaps = 4/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++ DTPGI
Sbjct: 7 KSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+++ S D ++ +V A + + ++ E + K ++P++LV+
Sbjct: 67 -HKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVPVILVV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P + + + Y + EV+P+SAK G+ E + D + KL GP Y+P+D
Sbjct: 124 NKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQYFPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI + R EVP++ V + T K I I+VE+ SQK
Sbjct: 184 ITDHPERFLVSEMIREKILLLTREEVPHSIAVTTDQMTRDEETGKIHIMATIIVERKSQK 243
Query: 353 IILIGK 358
I++GK
Sbjct: 244 GIILGK 249
>gi|354558007|ref|ZP_08977264.1| GTP-binding protein Era-like-protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353549681|gb|EHC19122.1| GTP-binding protein Era-like-protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 303
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 154/249 (61%), Gaps = 4/249 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+V+V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q+I DTPGI
Sbjct: 12 SGFVSVIGRPNAGKSTLLNQLLGQKVLIMSDKPQTTRNKIQCILTEERGQVIFLDTPGIH 71
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
+ K H L M+ + ++ D ++ +VDA +E + + + K P +LVLN
Sbjct: 72 KPK-HKLGEFMVDSAMNSLREVDLVLYMVDASAEFGGGEEYIINAL--KQVKTPCILVLN 128
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K DL+K + K +E Y K D ++P+SAK G E++ I ++P GP YYP+D V
Sbjct: 129 KIDLLKKEHVLKLIEDYSKLADFLAIVPLSAKTGENKEELLKVIFNQIPAGPMYYPEDEV 188
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
++ PERF + E++REK+ R+EVP++ V V S + + T ++ I+VE++SQK I
Sbjct: 189 TDQPERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKRTLVK-VRALIIVERDSQKGI 247
Query: 355 LIGKVSPFL 363
+IG+ L
Sbjct: 248 IIGEGGKLL 256
>gi|417810225|ref|ZP_12456904.1| GTP-binding protein Era [Lactobacillus salivarius GJ-24]
gi|335349021|gb|EGM50521.1| GTP-binding protein Era [Lactobacillus salivarius GJ-24]
Length = 300
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTP
Sbjct: 4 NFHSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+++ S D ++ +V+A + R D+ + E + + K PI L
Sbjct: 64 GI-HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP
Sbjct: 121 VINKIDQIHPDKLLQIMDEYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQ
Sbjct: 181 DQITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQ 240
>gi|317969119|ref|ZP_07970509.1| GTP-binding protein Era-like protein [Synechococcus sp. CB0205]
Length = 327
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 158/282 (56%), Gaps = 18/282 (6%)
Query: 86 LSEKPDRNMASPDDYEIEEFDYASHP-NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVT 144
LS+ P MA F P +SG+VA++G+PNVGKSTL NQ++G+K++I +
Sbjct: 13 LSDLPAEAMAG-------GFSLGQSPEGFRSGFVALVGRPNVGKSTLMNQLVGEKVAITS 65
Query: 145 NKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD 204
QTTR+R+ I + P Q++L DTPGI K H+L +++ R A D +++LVD
Sbjct: 66 PVAQTTRNRLRAILTTPTAQLVLVDTPGI-HKPHHLLGERLVQTARGAIGEVDQVLLLVD 124
Query: 205 ACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVS 264
+A R D + E + + K+P+ + LNK DL+ P + A+ Y + + PVS
Sbjct: 125 GSQAAGRGDGFIVELL--ERIKVPVQVALNKSDLVDPAQAAELEASYRELVPGWPLHPVS 182
Query: 265 AKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQ 324
A G G E + + +LP GP YP D VS+ PE+ + E+IRE++ R E+P++
Sbjct: 183 ALNGEGTEALVSALAAELPEGPHLYPPDAVSDQPEQLLLAELIREQVLQHTREEIPHSVA 242
Query: 325 VN---VVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
V VV K R TA + ++VE+NSQK ILIGK L
Sbjct: 243 VQIERVVDDKER-TA---VLATVLVERNSQKGILIGKGGSML 280
>gi|90961872|ref|YP_535788.1| GTP-binding protein Era [Lactobacillus salivarius UCC118]
gi|385840478|ref|YP_005863802.1| Like GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|122449031|sp|Q1WTU6.1|ERA_LACS1 RecName: Full=GTPase Era
gi|90821066|gb|ABD99705.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214599|gb|ADJ79015.1| Like GTP-binding protein [Lactobacillus salivarius CECT 5713]
Length = 300
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTP
Sbjct: 4 NFHSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+++ S D ++ +V+A + R D+ + E + + K PI L
Sbjct: 64 GI-HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP
Sbjct: 121 VINKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQ
Sbjct: 181 DQITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDAEKVLVQATIVVERNSQ 240
>gi|116511210|ref|YP_808426.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris SK11]
gi|385837381|ref|YP_005875011.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris A76]
gi|414073652|ref|YP_006998869.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris
UC509.9]
gi|122940350|sp|Q031W8.1|ERA_LACLS RecName: Full=GTPase Era
gi|116106864|gb|ABJ72004.1| GTPase [Lactococcus lactis subsp. cremoris SK11]
gi|358748609|gb|AEU39588.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris A76]
gi|413973572|gb|AFW91036.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 303
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 154/251 (61%), Gaps = 4/251 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++
Sbjct: 2 TNKKFKSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+++ S D ++ +V A + + ++ E + K ++P
Sbjct: 62 DTPGI-HKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++LV+NK D I P + + + Y + EV+P+SAK G+ E + D + KL GP Y
Sbjct: 119 VILVVNKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVE 347
+P+D +++HPERF V E+IREKI + R EVP++ V + T K I I+VE
Sbjct: 179 FPEDQITDHPERFLVSEMIREKILLLTREEVPHSIAVTTDQMTRDEETGKIHIMATIIVE 238
Query: 348 KNSQKIILIGK 358
+ SQK I++GK
Sbjct: 239 RKSQKGIILGK 249
>gi|320159556|ref|YP_004172780.1| GTP-binding protein era [Anaerolinea thermophila UNI-1]
gi|319993409|dbj|BAJ62180.1| GTP-binding protein era homolog [Anaerolinea thermophila UNI-1]
Length = 308
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 148/252 (58%), Gaps = 3/252 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N+ +GQK++ V+ +PQTTR R LGI + P+ QM+ DTPGI
Sbjct: 10 KSGFVAVVGRPNVGKSTLMNRFLGQKIAAVSPRPQTTRRRQLGILTLPQAQMVFVDTPGI 69
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP--ILL 231
K +H L M + A +AD ++ LVDA P D + + + + + P +LL
Sbjct: 70 -HKPVHKLGEYMNQVALDALRDADVVLWLVDASVKPTDEDRLCAQRILEALGQNPANVLL 128
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D + + A +L+ Y+ V+ +SA G G +D+ D IL +LP GP YY +
Sbjct: 129 ALNKMDQVPEDQRAGRLKGYQDLLSSAWVVWISATSGAGTQDLLDEILRRLPEGPPYYEE 188
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+ +++ ER ++IRE + ++EVP+A V + YK R +I +++E+ S
Sbjct: 189 EQITDLYEREIAADLIREAALIHLKDEVPHAIAVRIDEYKERSEDTAYIAATLLLERESH 248
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 249 KPIVIGKGGEML 260
>gi|325855172|ref|ZP_08171795.1| ribosome biogenesis GTPase Era [Prevotella denticola CRIS 18C-A]
gi|325483909|gb|EGC86853.1| ribosome biogenesis GTPase Era [Prevotella denticola CRIS 18C-A]
Length = 293
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 152/246 (61%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADVLLYVTDVVENPEKNMDFLEKVA---KMTIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D ++ + +E W+ D E++P+SAK G + + + LP PA++ K
Sbjct: 118 INKIDESDQSKLVELVEKWHGLLPDA-EILPISAKNKFGTDILMKRVRELLPESPAFFDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P RFFV EIIREKI Y E+PY+ +V V +K + I I VE++SQ
Sbjct: 177 DQLTDKPARFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDDRQIHINAVIYVERSSQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|288924557|ref|ZP_06418494.1| GTP-binding protein Era [Prevotella buccae D17]
gi|288338344|gb|EFC76693.1| GTP-binding protein Era [Prevotella buccae D17]
Length = 293
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTEDTQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + P + + L++ K +P+LL+
Sbjct: 62 VLKPNYKM-QEMMLAFSESALADADVLLYVTDVVENPGKNVDFLDKV---KKMSIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++ +E + E++P+SAK GV+ + I LP PAY+ KD
Sbjct: 118 INKIDESDQKKLGDLVEKWHSLLPNAEILPISAKNKFGVDMLMRRIKELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EI+REKI + Y E+PY+ +V+V +K K I V I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIVREKILLYYDKEIPYSVEVSVERFK-EDEHKIHINVVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|281425283|ref|ZP_06256196.1| hypothetical protein HMPREF0971_02255 [Prevotella oris F0302]
gi|281400576|gb|EFB31407.1| GTP-binding protein Era [Prevotella oris F0302]
Length = 293
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 153/248 (61%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L++ K K+P+LL+
Sbjct: 62 VLKPNYKM-QEMMLAFSESALTDADILLYVTDVVENPEKNMDFLDKV---KKMKIPVLLL 117
Query: 233 LNK---KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+NK D G+I K W+ + E++P+SAK GV+ + I LP PAY+
Sbjct: 118 VNKIDESDQKTLGDIVTK--WHSLLPNA-EILPLSAKNKFGVDMLLKRIKELLPESPAYF 174
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
KD +++ P +FFV EIIREKI + Y E+PY+ +V V +K + I I VE++
Sbjct: 175 DKDQLTDKPAKFFVSEIIREKILLYYDKEIPYSVEVRVERFKENDSVIH-INAVIYVERD 233
Query: 350 SQKIILIG 357
SQK I+IG
Sbjct: 234 SQKGIIIG 241
>gi|270339920|ref|ZP_06006458.2| GTP-binding protein Era [Prevotella bergensis DSM 17361]
gi|270333271|gb|EFA44057.1| GTP-binding protein Era [Prevotella bergensis DSM 17361]
Length = 310
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 146/246 (59%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + PE Q++ DTPG
Sbjct: 19 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTPEMQIVFSDTPG 78
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L +P++L+
Sbjct: 79 VLKPNYKM-QEMMLAFSESALSDADILLYVTDVVENPEKNMDFLNRV---KTMTIPVILL 134
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++ +E + E++P+SAK G + + I LP PAY+ KD
Sbjct: 135 INKIDETDQQKLGDLVEKWHALLPNAEILPISAKNKFGTDILMKRIAELLPESPAYFDKD 194
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI Y E+PY+ +V V +K I I VE++SQK
Sbjct: 195 QLTDKPARFFVSEIIREKILRYYDKEIPYSVEVVVEQFK-EDERHVHINAVIYVERDSQK 253
Query: 353 IILIGK 358
I+IG+
Sbjct: 254 GIIIGR 259
>gi|294651021|ref|ZP_06728361.1| GTP-binding protein era family protein [Acinetobacter haemolyticus
ATCC 19194]
gi|292823122|gb|EFF81985.1| GTP-binding protein era family protein [Acinetobacter haemolyticus
ATCC 19194]
Length = 341
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 150/258 (58%), Gaps = 15/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K + DE++ E + + +P++L
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVIL 151
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E ++ K + E++PVSA G +E +RD I LP P Y
Sbjct: 152 VINKLDTFENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYS 211
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT + +
Sbjct: 212 LDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTY 271
Query: 340 IQVEIVVEKNSQKIILIG 357
I I VE+ QK I+IG
Sbjct: 272 IDATIFVERQGQKAIVIG 289
>gi|359427855|ref|ZP_09218899.1| GTPase Era [Acinetobacter sp. NBRC 100985]
gi|358236746|dbj|GAB00438.1| GTPase Era [Acinetobacter sp. NBRC 100985]
Length = 346
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 149/256 (58%), Gaps = 15/256 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTPG+
Sbjct: 42 KSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTPGM 101
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+K++ ++ MM + SA + + ++ +VDA K + DE++ E + + +P++LV+
Sbjct: 102 HKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVILVI 158
Query: 234 NKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK D + E ++ K + E++PVSA G +E +RD I LP P Y D
Sbjct: 159 NKLDTFENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYSLD 218
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------FIQ 341
+++ ERF EIIREKI Q E+PY V + S+KT + +I
Sbjct: 219 QITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTYID 278
Query: 342 VEIVVEKNSQKIILIG 357
I VE+ QK I+IG
Sbjct: 279 ATIFVERQGQKAIVIG 294
>gi|255693538|ref|ZP_05417213.1| GTP-binding protein Era [Bacteroides finegoldii DSM 17565]
gi|423301590|ref|ZP_17279613.1| GTP-binding protein Era [Bacteroides finegoldii CL09T03C10]
gi|260620676|gb|EEX43547.1| ribosome biogenesis GTPase Era [Bacteroides finegoldii DSM 17565]
gi|408471583|gb|EKJ90114.1| GTP-binding protein Era [Bacteroides finegoldii CL09T03C10]
Length = 293
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E + + + +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMAKV---RQMTVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEDWKELLPQAEIIPISAASKFNVDYVMKRIKELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I+ I VE+ SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVAVEEFKEE-AKKIHIRAVIYVERESQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|449953346|ref|ZP_21808973.1| GTP-binding protein Era [Streptococcus mutans 4VF1]
gi|450137471|ref|ZP_21871680.1| GTP-binding protein Era [Streptococcus mutans NLML1]
gi|449172059|gb|EMB74700.1| GTP-binding protein Era [Streptococcus mutans 4VF1]
gi|449235252|gb|EMC34220.1| GTP-binding protein Era [Streptococcus mutans NLML1]
Length = 299
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K +I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIYIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|304382195|ref|ZP_07364703.1| GTP-binding protein Era [Prevotella marshii DSM 16973]
gi|304336660|gb|EFM02888.1| GTP-binding protein Era [Prevotella marshii DSM 16973]
Length = 303
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 12 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPG 71
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM + SA +AD ++ + D + PE+ + L++ K P+LL+
Sbjct: 72 VLQPNYKLQESMRAFS-ESALTDADVLLYVTDVVEKPEKNMDFLQKV---QKISTPVLLL 127
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + + E++P+SAK G++ + I LP P Y+ K+
Sbjct: 128 INKIDRSDQQTLGNIVERWHELLPNAEILPISAKNQFGIDILLKRIKDLLPDAPPYFGKE 187
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V S+K K I V I VE++SQK
Sbjct: 188 QWTDKPARFFVSEIIREKILLYYDKEIPYSVEVRVESFK-EDAQKIVIHVVIYVERDSQK 246
Query: 353 IILIG 357
I+IG
Sbjct: 247 GIIIG 251
>gi|365122467|ref|ZP_09339370.1| GTP-binding protein Era [Tannerella sp. 6_1_58FAA_CT1]
gi|363642707|gb|EHL82053.1| GTP-binding protein Era [Tannerella sp. 6_1_58FAA_CT1]
Length = 294
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 154/248 (62%), Gaps = 8/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + +SA ++AD ++ + D + P + L+ +P+LL+
Sbjct: 62 VLSPNYKLQESMLNFS-QSALVDADILLYVTDVVEMPTKNQGFLDRVAS---QSVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKL--EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+NK DL+K + ++L EW+ + E+IPVSA+Y ++ + I LP P ++
Sbjct: 118 INKVDLLKDQKDLERLVEEWHSLLPNA-EIIPVSAQYKFNLDYLLKRIQELLPPSPPFFE 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ P RFFV EIIREKI Y E+PYA +V V +K I I VE++S
Sbjct: 177 KDSLTDKPARFFVTEIIREKILQIYDKEIPYAVEVAVEQFK-EDEGHIHIMAIIYVERDS 235
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 236 QKGIVIGK 243
>gi|220928031|ref|YP_002504940.1| GTP-binding protein Era [Clostridium cellulolyticum H10]
gi|254783293|sp|B8I736.1|ERA_CLOCE RecName: Full=GTPase Era
gi|219998359|gb|ACL74960.1| GTP-binding protein Era [Clostridium cellulolyticum H10]
Length = 298
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 152/253 (60%), Gaps = 5/253 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG+V+V+G+PNVGKSTL N + GQK++I++NKPQTTR+ I G+ + E Q+IL DTP
Sbjct: 2 SYKSGFVSVIGRPNVGKSTLLNTITGQKIAIMSNKPQTTRNTIRGVITNKECQLILIDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
GI + K + + M+ NV S I D I+ LV+A P D + + + + K P+
Sbjct: 62 GIHKPKTKLGEYMV--NVASETIKEVDLILFLVEANTQPGAQDVNIIQQL--KQIKTPVF 117
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L+LNK DLI ++ ++ Y K D +IP+SA G++ I L +P GP ++
Sbjct: 118 LILNKVDLISKDKLLAIIDSYSKLMDFKAIIPISALKNDGIDLILKEALDYIPEGPQFFS 177
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
+D++++ PE+ E+IREK+ + +EVP+ V V S+K R IQ I EK+S
Sbjct: 178 EDMLTDQPEKVIAAEMIREKVLLNLDDEVPHGVGVEVTSFKEREDGLINIQATIYCEKSS 237
Query: 351 QKIILIGKVSPFL 363
K I+IGK L
Sbjct: 238 HKGIIIGKQGNML 250
>gi|323343320|ref|ZP_08083547.1| GTP-binding protein Era [Prevotella oralis ATCC 33269]
gi|323095139|gb|EFZ37713.1| GTP-binding protein Era [Prevotella oralis ATCC 33269]
Length = 305
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 14 HKAGFVNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTDDAQIVFSDTPG 73
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D +APE+ E L++ K +P+LL+
Sbjct: 74 VLKPNYKLQESMLAFS-ESALTDADVLLYVTDVVEAPEKNIEFLDKV---KKMTIPVLLL 129
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + + E++P+SA+ G + + I LP P Y+ K+
Sbjct: 130 INKIDQTDQKTLGNIVEKWHQLLPNAEILPISAQNKFGTDMLLKRIKELLPESPPYFDKE 189
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI + Y E+PY+ +V V S+K I I VE+NSQK
Sbjct: 190 QLTDKPAKFFVSEIIREKILLYYDKEIPYSVEVVVESFK-EDRKHIHINAVIYVERNSQK 248
Query: 353 IILIG 357
I+IG
Sbjct: 249 GIIIG 253
>gi|301300995|ref|ZP_07207158.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851411|gb|EFK79132.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 300
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTP
Sbjct: 4 NFHSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+++ S D ++ +V+A + R D+ + E + + K PI L
Sbjct: 64 GI-HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP
Sbjct: 121 VINKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQ
Sbjct: 181 DQITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQ 240
>gi|313202782|ref|YP_004041439.1| GTP-binding protein era [Paludibacter propionicigenes WB4]
gi|312442098|gb|ADQ78454.1| GTP-binding protein Era [Paludibacter propionicigenes WB4]
Length = 293
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 157/250 (62%), Gaps = 15/250 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRILGI +G ++Q++ DTPG
Sbjct: 2 HKSGFVNIVGNPNVGKSTLMNALVGERISIITSKAQTTRHRILGIVNGDDFQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL---PI 229
+++ + +S M+K RSA +AD ++ + D + E+ ++ +E K KL P+
Sbjct: 62 VLKPNYRLQES-MLKFSRSALSDADVLLYVTDVFDSYEKNEDFVE------KVKLNPAPL 114
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LL++NK DLI ++ +E +++ E+ PVSA ++ + I LP P ++
Sbjct: 115 LLIINKIDLIDEEKLVVLVEKWKELLPRAEIYPVSALEKFNIDSLFSRIKDLLPESPPFF 174
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV--E 347
KD +++ P +FFV EIIREKI M Y E+PY+ +V V ++ I++ V+ E
Sbjct: 175 DKDQLTDKPAKFFVTEIIREKILMNYEKEIPYSVEVEVEQFQEDDR---LIRINAVIYAE 231
Query: 348 KNSQKIILIG 357
++SQK ILIG
Sbjct: 232 RDSQKGILIG 241
>gi|256847126|ref|ZP_05552572.1| GTP-binding protein Era [Lactobacillus coleohominis 101-4-CHN]
gi|256715790|gb|EEU30765.1| GTP-binding protein Era [Lactobacillus coleohominis 101-4-CHN]
Length = 301
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 151/250 (60%), Gaps = 5/250 (2%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N ++GQK++I++N QTTR++I GI + + Q++ DTPG+
Sbjct: 8 SGFVALIGRPNVGKSTLLNYIVGQKVAIMSNVAQTTRNKIQGIYTTDDAQIVFIDTPGVH 67
Query: 175 EKKIHMLDSMMMKNVRS-AGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ + + D M + + A I+A VV D + P D+ + + D K PI LV+
Sbjct: 68 KPRTKLGDFMERSTMSALAEIDAVLYVVAADEKRGPG--DDYIINHLKDVKQ--PIYLVV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P E+ + Y+ +++PVSA G+ + + + ++ +LP+GP YYP D
Sbjct: 124 NKIDTVHPNELPTIVGQYKDALPFKDIVPVSALQGNNINTLMNELVQELPVGPQYYPSDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+S+HPERF + E+IREK+F R EVP++ ++V S K I I+VE+ QK
Sbjct: 184 ISDHPERFVIAEMIREKVFQLTREEVPHSVAIDVTSIKREDNETVHINANIIVERPGQKG 243
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 244 IIIGKKGQML 253
>gi|422878357|ref|ZP_16924823.1| GTP-binding protein Era [Streptococcus sanguinis SK1059]
gi|422928211|ref|ZP_16961153.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 29667]
gi|422931207|ref|ZP_16964138.1| GTP-binding protein Era [Streptococcus sanguinis SK340]
gi|332367331|gb|EGJ45066.1| GTP-binding protein Era [Streptococcus sanguinis SK1059]
gi|339617356|gb|EGQ21982.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 29667]
gi|339620389|gb|EGQ24959.1| GTP-binding protein Era [Streptococcus sanguinis SK340]
Length = 299
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADETRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|226951499|ref|ZP_03821963.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ATCC 27244]
gi|226837792|gb|EEH70175.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ATCC 27244]
Length = 341
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 150/258 (58%), Gaps = 15/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K + DE++ E + + +P++L
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVIL 151
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E ++ K + E++PVSA G +E +RD I LP P Y
Sbjct: 152 VINKLDTFENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYS 211
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT + +
Sbjct: 212 LDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTY 271
Query: 340 IQVEIVVEKNSQKIILIG 357
I I VE+ QK I+IG
Sbjct: 272 IDATIFVERQGQKAIVIG 289
>gi|253682642|ref|ZP_04863439.1| GTP-binding protein Era [Clostridium botulinum D str. 1873]
gi|253562354|gb|EES91806.1| GTP-binding protein Era [Clostridium botulinum D str. 1873]
Length = 294
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I I + +YQ++ DTPGI
Sbjct: 3 KSGFISIIGRPNVGKSTLINEILGEKLSIVSCRPQTTRNNIRAILTKDDYQLVFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K H L M+K S+ D IV + + DE++ E + + K P+ L++
Sbjct: 63 -HKPRHKLGEYMVKAAESSKDEVDLIVFITTPQNEIGKGDELILENIKNSKK--PVFLIV 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +A+ L+ Y ++ + E+IP+SA+ V+ + D ++ +P GP YYP D+
Sbjct: 120 NKIDENPPELVAETLKKYSEYMEFKEIIPISAQKNKNVDILLDLMIKYMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EIIREK EVP+ V ++S K I ++ EK+S K
Sbjct: 180 ITDVQERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQAKNGTYHIDANLLCEKDSHKG 239
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 240 IVIGKGGQML 249
>gi|348027347|ref|YP_004767152.1| GTP-binding protein Era [Megasphaera elsdenii DSM 20460]
gi|341823401|emb|CCC74325.1| GTP-binding protein Era [Megasphaera elsdenii DSM 20460]
Length = 297
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +I K+SIV++K QTTR+RIL I + E Q++ DTPGI
Sbjct: 5 KSGFVAVVGRPNVGKSTLINHIIKHKVSIVSDKAQTTRNRILCIHTDDECQIVFLDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M + + + D ++ L+ + D + E + D +P+ L++
Sbjct: 65 HKPK-HKLGEFMDEAAYQSLRDIDAVLFLISGNEKKGPGDLFVLEKLKDVG--VPVFLII 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D++ EI KK+ Y + +VIP+SA G V+ + D + LP GP Y+P D+
Sbjct: 122 NKIDVMSKEEILKKITEYAELYPFAQVIPISALKGDNVDAVVDELRKILPEGPKYFPDDM 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER V EI+REK+F R+EVP+A V R K +I+V + VE++SQK
Sbjct: 182 ITDQPERLLVAEIVREKLFRCTRDEVPHAIAAYVEEMTQRGKNKVYIRVTVYVERDSQKR 241
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 242 IVIGKNGAVL 251
>gi|327312577|ref|YP_004328014.1| ribosome biogenesis GTPase Era [Prevotella denticola F0289]
gi|326944896|gb|AEA20781.1| ribosome biogenesis GTPase Era [Prevotella denticola F0289]
Length = 293
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 152/246 (61%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADVLLYVTDVVENPEKNMDFLEKVA---KMTIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D ++ + +E W+ D E++P+SAK G + + + LP PA++ K
Sbjct: 118 INKIDESDQSKLVELVEKWHGLLPDA-EILPISAKNKFGTDILMKRVRELLPESPAFFDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P RFFV EIIREKI Y E+PY+ +V V +K + I I VE++SQ
Sbjct: 177 DQLTDKPARFFVSEIIREKILRYYDKEIPYSVEVVVERFK-EDDRQIHINAVIYVERSSQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|402756388|ref|ZP_10858644.1| GTPase Era [Acinetobacter sp. NCTC 7422]
Length = 341
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 150/258 (58%), Gaps = 15/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K + DE++ E + + ++P++L
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--EMPVIL 151
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E + K + E++PVSA G +E +RD I LP P Y
Sbjct: 152 VINKLDTFENKNEALPLIRERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYS 211
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT + +
Sbjct: 212 LDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTY 271
Query: 340 IQVEIVVEKNSQKIILIG 357
I I VE+ QK I+IG
Sbjct: 272 IDATIFVERQGQKAIVIG 289
>gi|406659427|ref|ZP_11067565.1| GTP-binding protein Era [Streptococcus iniae 9117]
gi|405577536|gb|EKB51684.1| GTP-binding protein Era [Streptococcus iniae 9117]
Length = 299
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + DE++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDEMIMERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ VE + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSHMDFKEVVPISALQGNNVETLLQLLTDNLDEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTKQEIPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|428300542|ref|YP_007138848.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 6303]
gi|428237086|gb|AFZ02876.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 6303]
Length = 325
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 165/273 (60%), Gaps = 20/273 (7%)
Query: 93 NMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRH 152
N P+D I + + P KSG+V ++G+PNVGKSTL N+++GQK++I + QTTR+
Sbjct: 14 NFLYPEDVMIPQ----APPEFKSGFVGIVGRPNVGKSTLMNRLVGQKIAITSPIAQTTRN 69
Query: 153 RILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAP 209
R+ GI + P Q+I DTPG I K H L ++++N ++A + D I+ +VDA C
Sbjct: 70 RLRGILTTPAAQIIFVDTPG-IHKPHHQLGEVLVQNAKAAIESVDLILFVVDASTVCGGG 128
Query: 210 ER-IDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKL-EWYEKFTDVD--EVIPVSA 265
+R + E+L +K + P++L LNK D +P E A K+ E Y + + +++ SA
Sbjct: 129 DRYVAELL------NKSQTPVILGLNKTDQ-QPPESADKIDESYTQLASTNNWKIVKFSA 181
Query: 266 KYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
G + ++D ++ KL GP YYP D+V++ PERF +GE+IRE+I + R EVP++ +
Sbjct: 182 ITGEELPQLQDLLIEKLETGPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAI 241
Query: 326 NVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
+ + P+ + I VE++SQK ILIGK
Sbjct: 242 AIDQVEETPSITRVL-ATINVERDSQKGILIGK 273
>gi|401681480|ref|ZP_10813380.1| GTP-binding protein Era [Streptococcus sp. AS14]
gi|400186250|gb|EJO20463.1| GTP-binding protein Era [Streptococcus sp. AS14]
Length = 299
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDKETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|227890898|ref|ZP_04008703.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741]
gi|227867307|gb|EEJ74728.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741]
Length = 300
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTP
Sbjct: 4 NFHSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+++ S D ++ +V+A + R D+ + E + + K PI L
Sbjct: 64 GI-HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLRNVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP
Sbjct: 121 VINKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQ
Sbjct: 181 DQITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQ 240
>gi|350566286|ref|ZP_08934971.1| GTP-binding protein Era [Peptoniphilus indolicus ATCC 29427]
gi|348662912|gb|EGY79540.1| GTP-binding protein Era [Peptoniphilus indolicus ATCC 29427]
Length = 296
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 2/246 (0%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL NQ++GQK+S ++NKPQTTR++I I + ++Q + DTPGI
Sbjct: 3 KSGFITIIGRPNVGKSTLLNQVVGQKISAISNKPQTTRNKITFIYTEEDFQAVFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K S D I +VD ++D + + + + K PI+L++
Sbjct: 63 QSPK-NKLGDYMLKTSESTLNEVDVITYIVDCSTTIGKLDSYIIKTLKEINIKTPIVLLI 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I+ G + + +E Y E+IP+SA GV+D + + LP GP YYP+D+
Sbjct: 122 NKIDEIQKGNLFELIEMYSNLNLFKEIIPISALKNDGVKDYIEVLRKYLPEGPQYYPEDL 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQK 352
V++ PE+F V E+IREK EVP+ V++ K R + I+ I +E+ S K
Sbjct: 182 VTDQPEKFIVAELIREKALRNLSEEVPHGIAVSIEKMKYRENKEICDIEANIYIERESHK 241
Query: 353 IILIGK 358
I+IGK
Sbjct: 242 KIVIGK 247
>gi|345885000|ref|ZP_08836394.1| GTP-binding protein Era [Prevotella sp. C561]
gi|345042149|gb|EGW46256.1| GTP-binding protein Era [Prevotella sp. C561]
Length = 293
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 153/248 (61%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDSQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADILLYVTDVIEDPEKNMDFLEKVA---KMSIPVILL 117
Query: 233 LNK---KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+NK D K G++ K W+ + E++P+SAK G + + + LP PA++
Sbjct: 118 INKIDESDQKKLGDLVTK--WHGLLPNA-EILPISAKNKFGTDILLKRVHELLPESPAFF 174
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
KD +++ P +FFV EIIREKI Y E+PY+ +V V S+K + I I VE+N
Sbjct: 175 DKDQLTDKPAKFFVSEIIREKILRYYDKEIPYSVEVVVESFK-EDDRQIHINAVIYVERN 233
Query: 350 SQKIILIG 357
SQK I+IG
Sbjct: 234 SQKGIIIG 241
>gi|374710514|ref|ZP_09714948.1| GTP-binding protein [Sporolactobacillus inulinus CASD]
Length = 301
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 151/251 (60%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+ A++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + Q++ DTPGI
Sbjct: 6 KSGFAAIVGRPNVGKSTLLNRVLGQKIAIMSDKAQTTRNKIHGIYTTDSEQVVFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L +M + D ++ L+DA + R D+ + + + K +P+ L++
Sbjct: 66 HKPK-HKLGQVMTSLALATLNEVDLVLFLIDAEQGYGRGDQFIIDFL--KKTTVPVFLIV 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P + ++ Y E+IP+SA G V + D I LP GP YYP+D
Sbjct: 123 NKIDKVHPDALLPLIDRYRSLYSFKEIIPISALQGQNVTTLMDQIGQVLPEGPKYYPEDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI R+EVP+A V + K + IQ I+VE++SQK
Sbjct: 183 ITDHPERFVVAELIREKILHLTRDEVPHAIAVIIDKMKEDDERQLTEIQATIMVERSSQK 242
Query: 353 IILIGKVSPFL 363
I+IG+ L
Sbjct: 243 GIIIGRSGSML 253
>gi|312863009|ref|ZP_07723247.1| ribosome biogenesis GTPase Era [Streptococcus vestibularis F0396]
gi|322517151|ref|ZP_08070035.1| GTP-binding protein Era [Streptococcus vestibularis ATCC 49124]
gi|311100545|gb|EFQ58750.1| ribosome biogenesis GTPase Era [Streptococcus vestibularis F0396]
gi|322124301|gb|EFX95812.1| GTP-binding protein Era [Streptococcus vestibularis ATCC 49124]
Length = 299
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKKGAML 251
>gi|288801361|ref|ZP_06406815.1| GTP-binding protein Era [Prevotella sp. oral taxon 299 str. F0039]
gi|288331744|gb|EFC70228.1| GTP-binding protein Era [Prevotella sp. oral taxon 299 str. F0039]
Length = 293
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + PE+ E LE+ H D +PI+L+
Sbjct: 62 VLKPNYRLQESMLAFS-ESALTDADILLYVTDVIENPEKNIEFLEK--VQHLD-IPIILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D+ + +E + E++P+SA GV+ + + I LP P ++ KD
Sbjct: 118 INKIDMSDQKTLGSLVEKWHSLLPKAEILPLSALNKFGVDILLNRIKDLLPDSPPFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y E+PY+ +V V +K I+V I VE+NSQK
Sbjct: 178 QLTDKPARFFVSEIIREKILLFYDKEIPYSVEVRVEEFKEDSKLIR-IRVIIYVERNSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|331269998|ref|YP_004396490.1| GTP-binding protein Era [Clostridium botulinum BKT015925]
gi|329126548|gb|AEB76493.1| GTP-binding protein Era [Clostridium botulinum BKT015925]
Length = 294
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 147/250 (58%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I I + +YQ++ DTPGI
Sbjct: 3 KSGFISIIGRPNVGKSTLINEILGEKLSIVSCRPQTTRNNIRAILTKEDYQLVFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K H L M+K S+ D IV + + DE++ E + + P+ L++
Sbjct: 63 -HKPRHKLGEYMVKAAESSKDEVDLIVFITTPQSEIGKGDELILENIKNSNK--PVFLIV 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +A+ L+ Y ++ + E+IP+SA+ V+ + D ++ +P GP YYP D+
Sbjct: 120 NKIDENPPELVAETLKKYSEYMEFKEIIPISAQKNKNVDTLLDLMIKYMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EIIREK EVP+ V ++S K I ++ EK+S K
Sbjct: 180 ITDVQERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQAKNGTYHIDANLLCEKDSHKG 239
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 240 IVIGKGGQML 249
>gi|53804478|ref|YP_113919.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath]
gi|53758239|gb|AAU92530.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath]
Length = 293
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 149/247 (60%), Gaps = 7/247 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSGYVA++G+PNVGKSTL N ++GQKLSIV+ +PQTTRHRILGI + Q+I DTPGI
Sbjct: 2 KSGYVALVGRPNVGKSTLLNHLLGQKLSIVSRRPQTTRHRILGIKTDGRGQVIYVDTPGI 61
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVD-ACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + + S+ + D I+ LVD A P+ DE++ + + KLP++LV
Sbjct: 62 HGGARRAMNRYLNRTAISSLLGVDVILWLVDRAGWLPD--DELVMARI--KEAKLPVILV 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDV-DEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D I+ + T + E++P+SA G + + + +L LP G YP+
Sbjct: 118 INKVDRIEGKDTLLPFLAEANATGLFSEIVPISALKGINLAVLEERVLALLPEGEPIYPE 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +S+ PERFFV EIIREK+F + EVP+A V + Y+ PT I I VE+ Q
Sbjct: 178 DQISDRPERFFVAEIIREKLFNRLTQEVPHALTVQIEQYRESPTLVR-IHAVIWVEREGQ 236
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 237 KAIVIGK 243
>gi|374338497|ref|YP_005095212.1| GTP-binding protein Era [Streptococcus macedonicus ACA-DC 198]
gi|372284612|emb|CCF02900.1| GTP-binding protein Era [Streptococcus macedonicus ACA-DC 198]
Length = 298
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNRVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + L M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPK-NALGDFMVESAYSTLREVDTVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ VE + + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQINDFRSQMDFKEIVPISALQGNNVETLMNILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVIVESMKRDPETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKKGAML 250
>gi|340348766|ref|ZP_08671797.1| GTP-binding protein Era [Prevotella nigrescens ATCC 33563]
gi|339613190|gb|EGQ17975.1| GTP-binding protein Era [Prevotella nigrescens ATCC 33563]
Length = 293
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + + MM++ SA +AD ++ + D + E+ + LE+ K ++P++L+
Sbjct: 62 VL-KPNYKMQEMMLQFSESALADADILLYVTDVIEKLEKNTDFLEKVA---KMQIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + + E++P+SAK G + + I LP PAY+ KD
Sbjct: 118 INKIDESDQKTLVTLVEKWHELLPKAEILPISAKNKFGTDTLMKRIKELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|227878694|ref|ZP_03996608.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256843288|ref|ZP_05548776.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN]
gi|256850355|ref|ZP_05555783.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US]
gi|262046497|ref|ZP_06019459.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US]
gi|293380657|ref|ZP_06626708.1| GTP-binding protein Era [Lactobacillus crispatus 214-1]
gi|312978179|ref|ZP_07789923.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05]
gi|423318613|ref|ZP_17296490.1| GTPase Era [Lactobacillus crispatus FB049-03]
gi|423321754|ref|ZP_17299625.1| GTPase Era [Lactobacillus crispatus FB077-07]
gi|227861709|gb|EEJ69314.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256614708|gb|EEU19909.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN]
gi|256712752|gb|EEU27745.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US]
gi|260573368|gb|EEX29926.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US]
gi|290922785|gb|EFD99736.1| GTP-binding protein Era [Lactobacillus crispatus 214-1]
gi|310894897|gb|EFQ43967.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05]
gi|405591692|gb|EKB65166.1| GTPase Era [Lactobacillus crispatus FB077-07]
gi|405593893|gb|EKB67328.1| GTPase Era [Lactobacillus crispatus FB049-03]
Length = 300
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 143/241 (59%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + E Q++ DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDEMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I +L+E K+P+L
Sbjct: 67 F-KPHSKLDDYMDKASVSSLNDVDLVLFMVEPEEMGKGDQYIANLLKEV------KVPVL 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ I LP+GP YY
Sbjct: 120 LVINKVDEIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLKTIKEYLPVGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V T K I+ I VEK+
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDHMNTHQNGKLLIEATIYVEKDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|421767231|ref|ZP_16203988.1| GTP-binding protein Era [Lactococcus garvieae DCC43]
gi|407624276|gb|EKF51046.1| GTP-binding protein Era [Lactococcus garvieae DCC43]
Length = 303
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 155/251 (61%), Gaps = 4/251 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + + Q+I
Sbjct: 2 TNNTFKSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKPQTTRNKIQGIYTTDKEQIIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+++ S D ++ +V A + + ++ E + +P
Sbjct: 62 DTPGI-HKPHNALGDFMVQSAYSTLRECDMVLFMVAADEPRSTGENMIIERL--KTADVP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++LV+NK D + P + + + Y + EV+P+SA G+ E + + + +KL GP Y
Sbjct: 119 VILVVNKIDKVHPDALFETVSDYTSQMEFAEVVPISALQGNNTERLLETLSSKLEEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVE 347
+P+D+V++HPERF V E+IREKI + R EVP++ V S K T K I I+VE
Sbjct: 179 FPEDMVTDHPERFLVSEMIREKILLLTREEVPHSIAVTTDSMKRDVETGKIHIMATIIVE 238
Query: 348 KNSQKIILIGK 358
+ SQK I++GK
Sbjct: 239 RKSQKGIILGK 249
>gi|419707453|ref|ZP_14234937.1| GTP-binding protein [Streptococcus salivarius PS4]
gi|383282799|gb|EIC80779.1| GTP-binding protein [Streptococcus salivarius PS4]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVTADEPRGKGDDMIIERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKKGAML 251
>gi|410582647|ref|ZP_11319753.1| GTP-binding protein Era [Thermaerobacter subterraneus DSM 13965]
gi|410505467|gb|EKP94976.1| GTP-binding protein Era [Thermaerobacter subterraneus DSM 13965]
Length = 345
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 148/252 (58%), Gaps = 16/252 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+PNVGKSTL NQ+IG+K++I+++KPQTTR RILG+ + P Q++ DTPGI
Sbjct: 53 RSGFVALIGRPNVGKSTLLNQLIGRKIAIMSDKPQTTRTRILGVLNRPGAQLVFVDTPGI 112
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 226
K H+L M++ R + + LV+A P+R E G GD K
Sbjct: 113 -HKPQHLLGEHMVQIARRTLQEVEAVCWLVEA---PDR-----EPGPGDRFIAEQLAGLK 163
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P +LV+NK D + PGE+ + + V PVSA +G GV ++ + LP GP
Sbjct: 164 TPRVLVVNKIDQVAPGEVPAIAARFAELGTFAAVHPVSALHGVGVAELVGTLEGLLPEGP 223
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
++P+D+V++ PE + E+IRE+I R EVP+A V + + RP ++ I V
Sbjct: 224 RFFPEDMVTDQPEAQIMAELIREQILHLTREEVPHAVAVQIEKVERRPNGVVYVPATIYV 283
Query: 347 EKNSQKIILIGK 358
E+ QK ILIG+
Sbjct: 284 EREGQKRILIGE 295
>gi|403053131|ref|ZP_10907615.1| GTPase Era [Acinetobacter bereziniae LMG 1003]
gi|445413123|ref|ZP_21433467.1| GTP-binding protein Era [Acinetobacter sp. WC-743]
gi|444765917|gb|ELW90194.1| GTP-binding protein Era [Acinetobacter sp. WC-743]
Length = 342
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 156/259 (60%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+++SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKSQAVFVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM K SA + + ++ ++DA K + DE++ E + + ++P++L
Sbjct: 96 GMHKKEVRAINKMMNKAAHSALRDVNLVLFVLDAQKWTQN-DELVLEKLKNA--EMPVVL 152
Query: 232 VLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
++NK D ++ + L + K + E++PVSA G ++ +RD I LP P Y
Sbjct: 153 IINKIDTLENKRMVLPLIQERAKLMNFAEIVPVSALRGANLDHLRDAIEKYLPFQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT----------RPTAK-DF 339
D +++ ERF EIIREKI Q E+PY V + S+KT RP A +
Sbjct: 213 LDQLTDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATINEKTGRPKAACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|339641574|ref|ZP_08663018.1| GTP-binding protein Era [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339454843|gb|EGP67458.1| GTP-binding protein Era [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--RAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLVDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|425746281|ref|ZP_18864311.1| GTP-binding protein Era [Acinetobacter baumannii WC-323]
gi|425486158|gb|EKU52530.1| GTP-binding protein Era [Acinetobacter baumannii WC-323]
Length = 342
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 149/258 (57%), Gaps = 15/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K + DE++ E + + +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVIL 152
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E + K + E++PVSA G +E +RD I LP P Y
Sbjct: 153 VINKLDTFENKNEALPLIRERAKLMNFAEIVPVSALRGANLEHLRDTIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT + +
Sbjct: 213 LDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTY 272
Query: 340 IQVEIVVEKNSQKIILIG 357
I I VE+ QK I+IG
Sbjct: 273 IDATIFVERQGQKAIVIG 290
>gi|308274308|emb|CBX30907.1| GTP-binding protein era homolog [uncultured Desulfobacterium sp.]
Length = 303
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 151/247 (61%), Gaps = 6/247 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSGYVA+ G PN GKSTL N+++G K+SI + KPQTTR++ILG+ P Q++ DTPGI
Sbjct: 13 KSGYVAIAGAPNAGKSTLLNKLLGFKISITSKKPQTTRNKILGVVHRPLSQLVFIDTPGI 72
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L+ ++ S + D I+++ DA + + IL + + P++L L
Sbjct: 73 F-KANNALNIKIVDAALSTFGDVDIILIVGDAANPDSKSESILIKNMESINK--PVVLAL 129
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D++ ++ + + +EK D V+PVSAK GVED+ + LP GPA++P+D+
Sbjct: 130 NKIDIVDKSKLLEIIIQWEKRFDFKAVVPVSAKSAEGVEDLLCVLENILPPGPAFFPEDM 189
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQ 351
+++ PERF E+IREKIF E+PYA V + S+ T K + +E I +E++SQ
Sbjct: 190 LTDVPERFVAAEMIREKIFRLTGQEIPYASAVTIDSF-TDKKNKGLVAIEATIHIERDSQ 248
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 249 KGIIIGK 255
>gi|450119886|ref|ZP_21865345.1| GTP-binding protein Era [Streptococcus mutans ST6]
gi|449230884|gb|EMC30126.1| GTP-binding protein Era [Streptococcus mutans ST6]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|307709149|ref|ZP_07645608.1| GTP-binding protein Era [Streptococcus mitis SK564]
gi|307620095|gb|EFN99212.1| GTP-binding protein Era [Streptococcus mitis SK564]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDKETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|418967454|ref|ZP_13519117.1| GTP-binding protein Era [Streptococcus mitis SK616]
gi|383344067|gb|EID22237.1| GTP-binding protein Era [Streptococcus mitis SK616]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVIFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEDTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|295693063|ref|YP_003601673.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1]
gi|295031169|emb|CBL50648.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1]
Length = 300
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 143/241 (59%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + E Q++ DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDEMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I +L+E K+P+L
Sbjct: 67 F-KPHSKLDDYMDKASVSSLNDVDLVLFMVEPEEMGKGDQYIANLLKEV------KVPVL 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ I LP+GP YY
Sbjct: 120 LVINKVDDIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLKTIKEYLPVGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V T K I+ I VEK+
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDHMNTHQNGKLLIEATIYVEKDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|198274288|ref|ZP_03206820.1| hypothetical protein BACPLE_00430 [Bacteroides plebeius DSM 17135]
gi|198272778|gb|EDY97047.1| ribosome biogenesis GTPase Era [Bacteroides plebeius DSM 17135]
Length = 293
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 154/247 (62%), Gaps = 7/247 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTEDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA ++AD ++ + D + P++ E +E+ K+P+LL+
Sbjct: 62 VLKPNYKLQESMLNFS-ESALVDADVLLYVTDTVEKPDKNAEFMEKV---RNLKVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL ++ K + EW+E + E+IP+SA V+ + I LP P Y+ K
Sbjct: 118 INKIDLTNQEDLVKLVDEWHEMLPEA-EIIPISAMAKFNVDVVMKRIKELLPDSPPYFGK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D ++ P RFFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQ
Sbjct: 177 DQWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVEQFKEDEKSIH-INAVIYVERDSQ 235
Query: 352 KIILIGK 358
K I+IG+
Sbjct: 236 KGIIIGR 242
>gi|227529166|ref|ZP_03959215.1| GTP-binding protein Era [Lactobacillus vaginalis ATCC 49540]
gi|227350891|gb|EEJ41182.1| GTP-binding protein Era [Lactobacillus vaginalis ATCC 49540]
Length = 301
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 151/254 (59%), Gaps = 3/254 (1%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+KSG+VA++G+PNVGKST N ++GQK++I++N QTTR++I GI + + Q++ D
Sbjct: 3 NPNYKSGFVALIGRPNVGKSTFLNYVVGQKVAIMSNVAQTTRNKIQGIYTTNDAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPI 229
TPG+ + + + D M K+ SA D ++ LV A + D+ + + + K PI
Sbjct: 63 TPGVHKPQTKLGD-FMEKSTLSALDEVDAVLYLVSATEDRGPGDDFIINRLKNVKQ--PI 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK D + P ++ + Y+ + P+SA G+ V + + ++ LP GP YY
Sbjct: 120 FLVINKIDQVNPNDLPEITAQYKDALPFAGIYPISALQGNNVSPLINKLIETLPNGPQYY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D +S+HPERF + E+IREK+F R EVP++ ++V S K I I+VE+
Sbjct: 180 PSDQISDHPERFVIAEMIREKVFELTRQEVPHSVAIDVTSVKREDDEHVHISANIIVERP 239
Query: 350 SQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 GQKGIIIGKKGQML 253
>gi|449991694|ref|ZP_21822015.1| GTP-binding protein Era [Streptococcus mutans NVAB]
gi|449180801|gb|EMB82939.1| GTP-binding protein Era [Streptococcus mutans NVAB]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E+IP+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIIPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKRGAML 251
>gi|259046831|ref|ZP_05737232.1| GTP-binding protein Era [Granulicatella adiacens ATCC 49175]
gi|259036454|gb|EEW37709.1| GTP-binding protein Era [Granulicatella adiacens ATCC 49175]
Length = 302
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKST N ++GQK++I+++K QTTR++I G+ + Q++ DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTFMNYVLGQKIAIMSDKAQTTRNKIQGVYTKDNAQIVFLDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ SA D ++ +V+ + D+ + E + K PI LVL
Sbjct: 66 HKPK-HELGEFMVKSAYSALKEVDAVLFMVNVSEKRGPGDDFIIEKL--KGIKTPIFLVL 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ P + +++E Y+ D V P+S G+ V ++ + ++ LP GP YYP D
Sbjct: 123 NKIDLVTPEVLLERVESYKDALDFAGVFPISVLQGNNVNELMEALIEALPEGPQYYPADQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPE F V E+IREKI + E+P++ V V + K + I+VE+ SQK
Sbjct: 183 ITDHPEYFVVSELIREKILQLTQEEIPHSVAVTVDKMQKDEFDKVHVYANIIVERKSQKG 242
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 243 IIIGKGGRLL 252
>gi|222055248|ref|YP_002537610.1| GTP-binding protein Era [Geobacter daltonii FRC-32]
gi|259645945|sp|B9M913.1|ERA_GEOSF RecName: Full=GTPase Era
gi|221564537|gb|ACM20509.1| GTP-binding protein Era [Geobacter daltonii FRC-32]
Length = 297
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 145/244 (59%), Gaps = 3/244 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+V+++G+PNVGKSTL N+++G K+ I ++KPQTTR+RI GI + P Q++ DTPGI
Sbjct: 8 SGFVSIIGRPNVGKSTLLNKILGDKIVITSDKPQTTRNRIQGIHNLPGCQIVFIDTPGIH 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L+ M+ S+ D I+ LV+A P +E + + + P++LV+N
Sbjct: 68 RAK-SRLNKYMVDVALSSIKEVDVILFLVEADTKPANQEETILGALASAEA--PVVLVIN 124
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K DL+ + +K+ Y EVIPVSA G + + LP GP Y+P DI+
Sbjct: 125 KVDLVAKESLLEKMAAYSGLYPFREVIPVSALTGDNTGRLVQVVRDLLPEGPPYFPDDIL 184
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
++ PERF V EI+REK+F +EVPY+ V V S+K R I I VE++SQK I
Sbjct: 185 TDVPERFVVAEIVREKVFRLTHDEVPYSVAVVVESFKERDDGLILISAVINVERDSQKGI 244
Query: 355 LIGK 358
+IG+
Sbjct: 245 IIGR 248
>gi|339443258|ref|YP_004709263.1| GTPase [Clostridium sp. SY8519]
gi|338902659|dbj|BAK48161.1| GTPase [Clostridium sp. SY8519]
Length = 304
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 152/256 (59%), Gaps = 12/256 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY-QMILYDTPG 172
KSG+V ++G+PNVGKSTL N++IGQK++I +NKPQTTR+RI I + E Q+I DTPG
Sbjct: 6 KSGFVTLIGRPNVGKSTLMNRIIGQKIAITSNKPQTTRNRIQTIYTDKETGQIIFLDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLPI 229
I + K + L M+ D I+ LV+ A E+ I+EE K K P+
Sbjct: 66 IHKAK-NKLGEYMVHVAEHTLSEVDVILWLVEPSNFIGAGEK--HIIEEL---KKVKTPV 119
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+LV+NK D +K EI + ++ Y K D E+IP+SA G VED+ I LP GP +Y
Sbjct: 120 ILVINKIDTVKKEEILEYIDTYRKVCDFAEIIPLSALKGDNVEDLVQTIFKYLPYGPMFY 179
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVE 347
+D +++ PER V E+IREK + EVP+ V V S K RP K+ + +E I+ E
Sbjct: 180 DEDTITDQPERQIVAELIREKALRALKEEVPHGIAVAVESMKERPGKKEMVDIEATIICE 239
Query: 348 KNSQKIILIGKVSPFL 363
++S K I+IGK L
Sbjct: 240 RDSHKGIVIGKKGAML 255
>gi|422882692|ref|ZP_16929148.1| GTP-binding protein Era [Streptococcus sanguinis SK355]
gi|332358725|gb|EGJ36548.1| GTP-binding protein Era [Streptococcus sanguinis SK355]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|290580024|ref|YP_003484416.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449935824|ref|ZP_21803639.1| GTP-binding protein Era [Streptococcus mutans 2ST1]
gi|449941853|ref|ZP_21805717.1| GTP-binding protein Era [Streptococcus mutans 11A1]
gi|449972123|ref|ZP_21814668.1| GTP-binding protein Era [Streptococcus mutans 2VS1]
gi|450030141|ref|ZP_21833083.1| GTP-binding protein Era [Streptococcus mutans G123]
gi|450036165|ref|ZP_21835382.1| GTP-binding protein Era [Streptococcus mutans M21]
gi|450056412|ref|ZP_21842029.1| GTP-binding protein Era [Streptococcus mutans NLML4]
gi|450091419|ref|ZP_21855485.1| GTP-binding protein Era [Streptococcus mutans W6]
gi|450111535|ref|ZP_21862762.1| GTP-binding protein Era [Streptococcus mutans SM6]
gi|450144582|ref|ZP_21874103.1| GTP-binding protein Era [Streptococcus mutans 1ID3]
gi|450150647|ref|ZP_21876682.1| GTP-binding protein Era [Streptococcus mutans 14D]
gi|450154442|ref|ZP_21877730.1| GTP-binding protein Era [Streptococcus mutans 21]
gi|450160523|ref|ZP_21880068.1| GTP-binding protein Era [Streptococcus mutans 66-2A]
gi|450164799|ref|ZP_21881521.1| GTP-binding protein Era [Streptococcus mutans B]
gi|254996923|dbj|BAH87524.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449150425|gb|EMB54190.1| GTP-binding protein Era [Streptococcus mutans 1ID3]
gi|449151631|gb|EMB55359.1| GTP-binding protein Era [Streptococcus mutans 11A1]
gi|449166174|gb|EMB69129.1| GTP-binding protein Era [Streptococcus mutans 2ST1]
gi|449171177|gb|EMB73852.1| GTP-binding protein Era [Streptococcus mutans 2VS1]
gi|449193270|gb|EMB94659.1| GTP-binding protein Era [Streptococcus mutans G123]
gi|449194551|gb|EMB95905.1| GTP-binding protein Era [Streptococcus mutans M21]
gi|449206782|gb|EMC07475.1| GTP-binding protein Era [Streptococcus mutans NLML4]
gi|449219375|gb|EMC19344.1| GTP-binding protein Era [Streptococcus mutans W6]
gi|449223782|gb|EMC23453.1| GTP-binding protein Era [Streptococcus mutans SM6]
gi|449233276|gb|EMC32353.1| GTP-binding protein Era [Streptococcus mutans 14D]
gi|449237814|gb|EMC36618.1| GTP-binding protein Era [Streptococcus mutans 21]
gi|449239898|gb|EMC38598.1| GTP-binding protein Era [Streptococcus mutans 66-2A]
gi|449241339|gb|EMC39972.1| GTP-binding protein Era [Streptococcus mutans B]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|345882256|ref|ZP_08833761.1| GTP-binding protein Era [Prevotella oulorum F0390]
gi|343918012|gb|EGV28784.1| GTP-binding protein Era [Prevotella oulorum F0390]
Length = 294
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 3 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNEDDCQIVFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L++ + ++P+LL+
Sbjct: 63 VLKPNYKM-QEMMLAFSESALTDADILLYVTDVVENPEKNLDFLDKV---KRMQIPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++ + + E++P+SAK G++ + I LP PAY+ K+
Sbjct: 119 VNKIDETNQQQLGDIVSRWHTLLPNAEILPLSAKNKFGIDILLRRIKELLPESPAYFDKE 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI + Y E+PY+ +V V +K TA I I VE++SQK
Sbjct: 179 QLTDKPAKFFVSEIIREKILLYYDKEIPYSVEVRVEQFKETETAIR-INAVIYVERDSQK 237
Query: 353 IILIG 357
I+IG
Sbjct: 238 GIIIG 242
>gi|450097590|ref|ZP_21857544.1| GTP-binding protein Era [Streptococcus mutans SF1]
gi|449222554|gb|EMC22278.1| GTP-binding protein Era [Streptococcus mutans SF1]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVSVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|119511690|ref|ZP_01630795.1| GTP-binding protein Era [Nodularia spumigena CCY9414]
gi|119463675|gb|EAW44607.1| GTP-binding protein Era [Nodularia spumigena CCY9414]
Length = 324
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 155/254 (61%), Gaps = 15/254 (5%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG++ ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DT
Sbjct: 28 PEFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGILTTPEAQLIFVDT 87
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDK 226
PG I K H L +++KN R+A + D ++ +VD AC A +R I ++L + +
Sbjct: 88 PG-IHKPHHQLGQVLVKNARNAIDSVDVVLFVVDGSVACGAGDRFIADLLV------RTE 140
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPL 284
P++L LNK D +P + Y+ + + ++ SA+ G G+ +++ ++ L
Sbjct: 141 TPVILGLNKIDQ-QPPNFQPIDDSYQALAETQQWPIVKFSAQTGAGLPELQQLLIEHLET 199
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + PT + I
Sbjct: 200 GPFYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDRVDESPTITRIL-ATI 258
Query: 345 VVEKNSQKIILIGK 358
VE++SQK ILIGK
Sbjct: 259 HVERDSQKGILIGK 272
>gi|406035703|ref|ZP_11043067.1| GTPase Era [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 341
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 150/258 (58%), Gaps = 15/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K + DE++ E + + +P++L
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--DMPVIL 151
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E + K + E++PVSA G ++ +RD I LP P Y
Sbjct: 152 VINKLDTFENKNEALPLIRERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPYQPPLYS 211
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT A + +
Sbjct: 212 LDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEAAVNEKTGRLKPPCTY 271
Query: 340 IQVEIVVEKNSQKIILIG 357
I I VE+ QK I+IG
Sbjct: 272 IDATIFVERQGQKAIVIG 289
>gi|385262450|ref|ZP_10040554.1| GTP-binding protein Era [Streptococcus sp. SK643]
gi|385190351|gb|EIF37798.1| GTP-binding protein Era [Streptococcus sp. SK643]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|340346843|ref|ZP_08669962.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
gi|433652073|ref|YP_007278452.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
gi|339611060|gb|EGQ15900.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
gi|433302606|gb|AGB28422.1| GTP-binding protein Era [Prevotella dentalis DSM 3688]
Length = 293
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 147/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+K+SI T K QTTRHRI+GI + P+ Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTPDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L++ +P++L+
Sbjct: 62 VLKPNYKM-QEMMLAFSESALADADILLYVTDVVENPEKNMDFLDKV---KSMTIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++ ++ + E++P+SAK G + + I LP PAY+ KD
Sbjct: 118 INKIDESDQQKLVAAVDKWHSLLPNAEILPISAKNKFGTDMLMKRIAELLPESPAYFEKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y E+PYA +V V +K I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEIPYAVEVAVERFK-EDERHIHINTVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|209542554|ref|YP_002274783.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
gi|209530231|gb|ACI50168.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
Length = 297
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 138/246 (56%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI E Q++L DTPGI
Sbjct: 4 RCGFVAIVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGESQILLVDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLV 232
+ + LD M+ + +AD ++LVDA + E + I+E + + LV
Sbjct: 64 FQPR-RKLDRAMVAAAWTGAEDADITLLLVDARRGLSESVRAIVERLAQSRRR---VWLV 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ + DV+ V VSA+ G GVED+ + LP GP YP+D
Sbjct: 120 LNKTDLVDRQALLPLTAELSALLDVEHVYMVSARSGDGVEDLLSALAASLPEGPYLYPED 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P+R E++RE+IF+Q EVPYA S++ P I+V I V + K
Sbjct: 180 DLTDLPDRLLAAELVREQIFLQTHEEVPYAATAETESFRELPDGSVRIEVTIYVARAGHK 239
Query: 353 IILIGK 358
ILIG+
Sbjct: 240 AILIGE 245
>gi|309800252|ref|ZP_07694428.1| GTP-binding protein Era [Streptococcus infantis SK1302]
gi|308116105|gb|EFO53605.1| GTP-binding protein Era [Streptococcus infantis SK1302]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVIFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|450170125|ref|ZP_21883363.1| GTP-binding protein Era [Streptococcus mutans SM4]
gi|449246219|gb|EMC44530.1| GTP-binding protein Era [Streptococcus mutans SM4]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|189463676|ref|ZP_03012461.1| hypothetical protein BACINT_00007 [Bacteroides intestinalis DSM
17393]
gi|189438626|gb|EDV07611.1| ribosome biogenesis GTPase Era [Bacteroides intestinalis DSM 17393]
Length = 293
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 154/246 (62%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + + +SM+ + SA +AD ++ + D + P++ +E +E+ H + +P+LL+
Sbjct: 62 VLKPQYKLQESMLNFST-SALTDADVLLYVTDVVETPDKHNEFVEKVA--HME-IPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E ++ E+IP+SA V+ + + LP P Y+ KD
Sbjct: 118 INKIDLSNQEKLVELVEAWKALLPNAEIIPISATTKFNVDYVMKRVKELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EDAKKIHISAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|422851217|ref|ZP_16897887.1| GTP-binding protein Era [Streptococcus sanguinis SK150]
gi|325694805|gb|EGD36710.1| GTP-binding protein Era [Streptococcus sanguinis SK150]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLVDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|260591203|ref|ZP_05856661.1| GTP-binding protein Era [Prevotella veroralis F0319]
gi|260537068|gb|EEX19685.1| GTP-binding protein Era [Prevotella veroralis F0319]
Length = 293
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADILLYVTDVVENPEKNMDFLEKV---SKMTIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++ + + K E++P+SAK G + + I LP PA++ KD
Sbjct: 118 INKIDESDQKKLGDLVGRWHKLLPNAEILPISAKNKFGTDILMKRIHELLPDSPAFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI Y EVPY+ +V V +K + I I VE++SQK
Sbjct: 178 QLTDKPARFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDDRQIHINAVIYVERSSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|433448754|ref|ZP_20411620.1| GTPase Era [Weissella ceti NC36]
gi|429539681|gb|ELA07717.1| GTPase Era [Weissella ceti NC36]
Length = 302
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 153/257 (59%), Gaps = 17/257 (6%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG+VA++G+PNVGKSTL N+MIG+K++I++ K QTTR++I GI + + Q++
Sbjct: 2 SEQAFKSGFVAIVGRPNVGKSTLMNEMIGEKIAIMSPKAQTTRNKIQGIYTNDDGQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD------ 222
DTPGI K + L M+K S+ AD I +V+A + + G GD
Sbjct: 62 DTPGI-HKPQNGLGDFMVKTAMSSLGEADMIWFVVNADQ---------KRGAGDDFIINR 111
Query: 223 -HKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
P+ L++NK DL+ P E+ ++ Y + + E+ P+SA G GV ++ + +
Sbjct: 112 LKTVDTPVYLIINKVDLVHPQELLAIIDDYRQQMEFAEIFPISALDGDGVPELLNVTMGH 171
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+ GP YYP+D +++HPERF + E+IREK+ R EVP++ V + + + AK IQ
Sbjct: 172 MEEGPQYYPEDQITDHPERFIMAELIREKVLQLTRQEVPHSVAVVIETIEREGDAKLHIQ 231
Query: 342 VEIVVEKNSQKIILIGK 358
IVVE+ +QK I+IGK
Sbjct: 232 AAIVVERPTQKNIVIGK 248
>gi|417848260|ref|ZP_12494209.1| GTP-binding protein Era [Streptococcus mitis SK1073]
gi|339455007|gb|EGP67620.1| GTP-binding protein Era [Streptococcus mitis SK1073]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|258516219|ref|YP_003192441.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771]
gi|257779924|gb|ACV63818.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771]
Length = 300
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 151/258 (58%), Gaps = 9/258 (3%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +SG+VA++G+PNVGKSTL N+MIG+K++I+++KPQTTRH+I + + YQ+I
Sbjct: 3 SKEQFRSGFVAIIGRPNVGKSTLMNRMIGRKIAIMSDKPQTTRHKIYCVLTRDNYQVIFL 62
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKD 225
DTPGI + K H L ++ S D I+ LV+A C A +R ILE K
Sbjct: 63 DTPGIHKPK-HKLGQHLVDTSLSTFGEVDLILFLVEANSFCGAGDRY--ILEHLA---KI 116
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ LV+NK DL+ ++ ++ EVIPVSA G V+ + I LP G
Sbjct: 117 KTPVFLVINKVDLVPKEQLLPLIDELHSKYKFQEVIPVSALNGDNVDRLERLIAGCLPPG 176
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP D++++ PE+F + E+IREKI E+P++ V V + RP ++ I
Sbjct: 177 PKYYPDDMLTDKPEQFIMAELIREKILHLTSQEIPHSVAVIVEQLEERPNNTLYVGALIY 236
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IGK L
Sbjct: 237 VERDSQKGIIIGKKGQML 254
>gi|24379997|ref|NP_721952.1| GTPase Era [Streptococcus mutans UA159]
gi|449865327|ref|ZP_21778917.1| GTP-binding protein Era [Streptococcus mutans U2B]
gi|449871751|ref|ZP_21781252.1| GTP-binding protein Era [Streptococcus mutans 8ID3]
gi|449894274|ref|ZP_21789150.1| GTP-binding protein Era [Streptococcus mutans SF12]
gi|449916542|ref|ZP_21796915.1| GTP-binding protein Era [Streptococcus mutans 15JP3]
gi|449975748|ref|ZP_21815964.1| GTP-binding protein Era [Streptococcus mutans 11VS1]
gi|450010786|ref|ZP_21828794.1| GTP-binding protein Era [Streptococcus mutans A19]
gi|450023899|ref|ZP_21830916.1| GTP-binding protein Era [Streptococcus mutans U138]
gi|450050373|ref|ZP_21840241.1| GTP-binding protein Era [Streptococcus mutans NFSM1]
gi|450071124|ref|ZP_21847979.1| GTP-binding protein Era [Streptococcus mutans M2A]
gi|450076164|ref|ZP_21849729.1| GTP-binding protein Era [Streptococcus mutans N3209]
gi|450083573|ref|ZP_21852989.1| GTP-binding protein Era [Streptococcus mutans N66]
gi|26006953|sp|P37214.2|ERA_STRMU RecName: Full=GTPase Era; AltName: Full=SGP
gi|24377985|gb|AAN59258.1|AE014993_2 GTP-binding protein; Era-like protein [Streptococcus mutans UA159]
gi|449155089|gb|EMB58621.1| GTP-binding protein Era [Streptococcus mutans 8ID3]
gi|449155140|gb|EMB58670.1| GTP-binding protein Era [Streptococcus mutans 15JP3]
gi|449176457|gb|EMB78803.1| GTP-binding protein Era [Streptococcus mutans 11VS1]
gi|449189985|gb|EMB91598.1| GTP-binding protein Era [Streptococcus mutans A19]
gi|449192706|gb|EMB94114.1| GTP-binding protein Era [Streptococcus mutans U138]
gi|449202726|gb|EMC03623.1| GTP-binding protein Era [Streptococcus mutans NFSM1]
gi|449212749|gb|EMC13101.1| GTP-binding protein Era [Streptococcus mutans M2A]
gi|449212961|gb|EMC13309.1| GTP-binding protein Era [Streptococcus mutans N3209]
gi|449212977|gb|EMC13324.1| GTP-binding protein Era [Streptococcus mutans N66]
gi|449255401|gb|EMC53256.1| GTP-binding protein Era [Streptococcus mutans SF12]
gi|449264314|gb|EMC61659.1| GTP-binding protein Era [Streptococcus mutans U2B]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|58040242|ref|YP_192206.1| GTP-binding protein Era [Gluconobacter oxydans 621H]
gi|58002656|gb|AAW61550.1| GTP-binding protein [Gluconobacter oxydans 621H]
Length = 295
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N++ G KLSIV+ K QTTR R LGI Q+IL D PGI
Sbjct: 4 RCGFVALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVMQDNAQIILVDLPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLV 232
+ + LD M+ S +AD ++LVDA E + EI+ + + + K++ I LV
Sbjct: 64 FKPR-RRLDRAMVNAAWSGSQDADLTLLLVDAKSGLREDVREIIAK-LAESKNR--IWLV 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL++ GE+ + +V+ V +SA+ G GV D+ + +LP GP YP+D
Sbjct: 120 LNKTDLVERGELLPLTQEISGLINVEHVFMLSARSGEGVSDLMARLAAELPEGPFLYPED 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P+R E++RE+IFMQ E+PY V S+K RP I+V I V + K
Sbjct: 180 DLTDLPDRLLAAELVREQIFMQTHEEIPYQATVETESFKERPDGSVRIEVTIYVSRPGHK 239
Query: 353 IILIGK 358
ILIG+
Sbjct: 240 AILIGE 245
>gi|260892064|ref|YP_003238161.1| GTP-binding protein Era [Ammonifex degensii KC4]
gi|260864205|gb|ACX51311.1| GTP-binding protein Era [Ammonifex degensii KC4]
Length = 300
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 144/246 (58%), Gaps = 3/246 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++SG+V+V+G+PNVGKSTL N ++GQK++IV++KPQTTRHRILG+ + PE Q++ DTP
Sbjct: 5 EYRSGFVSVVGRPNVGKSTLINHLVGQKVAIVSDKPQTTRHRILGVLTLPEAQIVFVDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G I K H L ++ A D ++ L +A P D + E + K ++P++L
Sbjct: 65 G-IHKPRHRLGEYLVTLALGALKGVDLVLFLSEATSPPGAGDYFILEQL--KKAEVPVIL 121
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
VLNK DLI + ++ + + D ++PVSA G +E + I+ LP GP Y+P
Sbjct: 122 VLNKIDLISKPRLLPLIDLWRQEHDFAAIVPVSALTGENLERLVQEIVEHLPPGPQYFPP 181
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++ + P F V E+IREK+ EVP+ V V +R +++ I VE+ S
Sbjct: 182 EVTTSQPPEFVVAELIREKVLHLTHEEVPHGVAVVVEEMASRRKDLVYLRATIYVERESH 241
Query: 352 KIILIG 357
K I+IG
Sbjct: 242 KKIIIG 247
>gi|289167813|ref|YP_003446082.1| GTPase/GTP-binding protein Era [Streptococcus mitis B6]
gi|288907380|emb|CBJ22217.1| GTPase/GTP-binding protein Era [Streptococcus mitis B6]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|313149535|ref|ZP_07811728.1| GTP-binding protein Era [Bacteroides fragilis 3_1_12]
gi|423280589|ref|ZP_17259501.1| GTP-binding protein Era [Bacteroides fragilis HMW 610]
gi|424665180|ref|ZP_18102216.1| GTP-binding protein Era [Bacteroides fragilis HMW 616]
gi|313138302|gb|EFR55662.1| GTP-binding protein Era [Bacteroides fragilis 3_1_12]
gi|404575044|gb|EKA79789.1| GTP-binding protein Era [Bacteroides fragilis HMW 616]
gi|404583796|gb|EKA88469.1| GTP-binding protein Era [Bacteroides fragilis HMW 610]
Length = 293
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +++ + P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQTAPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEDWKELLPQAEIIPISAATKFNVDYVMKRIKELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EDAKKIHIHAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|450132950|ref|ZP_21870395.1| GTP-binding protein Era [Streptococcus mutans NLML8]
gi|449152199|gb|EMB55911.1| GTP-binding protein Era [Streptococcus mutans NLML8]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLIDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|162147936|ref|YP_001602397.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
gi|161786513|emb|CAP56095.1| putative GTP-binding protein era homolog [Gluconacetobacter
diazotrophicus PAl 5]
Length = 305
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 138/246 (56%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI E Q++L DTPGI
Sbjct: 12 RCGFVAIVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGESQILLVDTPGI 71
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLV 232
+ + LD M+ + +AD ++LVDA + E + I+E + + LV
Sbjct: 72 FQPR-RKLDRAMVAAAWTGAEDADITLLLVDARRGLSESVRAIVERLAQSRRR---VWLV 127
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ + DV+ V VSA+ G GVED+ + LP GP YP+D
Sbjct: 128 LNKTDLVDRQALLPLTAELSALLDVEHVYMVSARSGDGVEDLLSALAASLPEGPYLYPED 187
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P+R E++RE+IF+Q EVPYA S++ P I+V I V + K
Sbjct: 188 DLTDLPDRLLAAELVREQIFLQTHEEVPYAATAETESFRELPDGSVRIEVTIYVARAGHK 247
Query: 353 IILIGK 358
ILIG+
Sbjct: 248 AILIGE 253
>gi|125718416|ref|YP_001035549.1| GTP-binding protein Era [Streptococcus sanguinis SK36]
gi|323351170|ref|ZP_08086826.1| GTP-binding protein Era [Streptococcus sanguinis VMC66]
gi|422820831|ref|ZP_16869024.1| GTP-binding protein Era [Streptococcus sanguinis SK353]
gi|422847118|ref|ZP_16893801.1| GTP-binding protein Era [Streptococcus sanguinis SK72]
gi|422848220|ref|ZP_16894896.1| GTP-binding protein Era [Streptococcus sanguinis SK115]
gi|422854685|ref|ZP_16901349.1| GTP-binding protein Era [Streptococcus sanguinis SK160]
gi|422859708|ref|ZP_16906352.1| GTP-binding protein Era [Streptococcus sanguinis SK330]
gi|422870488|ref|ZP_16916981.1| GTP-binding protein Era [Streptococcus sanguinis SK1087]
gi|422875967|ref|ZP_16922437.1| GTP-binding protein Era [Streptococcus sanguinis SK1056]
gi|422884566|ref|ZP_16931014.1| GTP-binding protein Era [Streptococcus sanguinis SK49]
gi|189037679|sp|A3CP94.1|ERA_STRSV RecName: Full=GTPase Era
gi|125498333|gb|ABN44999.1| Era-like GTP-binding protein, putative [Streptococcus sanguinis
SK36]
gi|322122394|gb|EFX94105.1| GTP-binding protein Era [Streptococcus sanguinis VMC66]
gi|324991449|gb|EGC23382.1| GTP-binding protein Era [Streptococcus sanguinis SK353]
gi|325687311|gb|EGD29333.1| GTP-binding protein Era [Streptococcus sanguinis SK72]
gi|325690752|gb|EGD32753.1| GTP-binding protein Era [Streptococcus sanguinis SK115]
gi|325696180|gb|EGD38071.1| GTP-binding protein Era [Streptococcus sanguinis SK160]
gi|327470591|gb|EGF16047.1| GTP-binding protein Era [Streptococcus sanguinis SK330]
gi|328946703|gb|EGG40841.1| GTP-binding protein Era [Streptococcus sanguinis SK1087]
gi|332358996|gb|EGJ36817.1| GTP-binding protein Era [Streptococcus sanguinis SK49]
gi|332362403|gb|EGJ40203.1| GTP-binding protein Era [Streptococcus sanguinis SK1056]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|255030306|ref|ZP_05302257.1| GTP-binding protein Era [Listeria monocytogenes LO28]
Length = 285
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 146/240 (60%), Gaps = 4/240 (1%)
Query: 125 NVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSM 184
NVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI + K H L
Sbjct: 1 NVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPK-HKLGDF 59
Query: 185 MMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEI 244
M+K + D I ++DA R DE + E + + + P+ L++NK DLI P ++
Sbjct: 60 MVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLINKIDLIAPEDL 117
Query: 245 AKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVG 304
K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD +++HPERF +
Sbjct: 118 FKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHPERFIIS 177
Query: 305 EIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
E+IRE++ R EVP++ V + + P T K I I+VE+++QK I+IGK L
Sbjct: 178 ELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIGKQGQML 237
>gi|450175194|ref|ZP_21885022.1| GTP-binding protein Era [Streptococcus mutans SM1]
gi|449247267|gb|EMC45552.1| GTP-binding protein Era [Streptococcus mutans SM1]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLADHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|449979699|ref|ZP_21816846.1| GTP-binding protein Era [Streptococcus mutans 5SM3]
gi|450001514|ref|ZP_21825696.1| GTP-binding protein Era [Streptococcus mutans N29]
gi|450005302|ref|ZP_21826603.1| GTP-binding protein Era [Streptococcus mutans NMT4863]
gi|449177625|gb|EMB79917.1| GTP-binding protein Era [Streptococcus mutans 5SM3]
gi|449184479|gb|EMB86423.1| GTP-binding protein Era [Streptococcus mutans N29]
gi|449188720|gb|EMB90417.1| GTP-binding protein Era [Streptococcus mutans NMT4863]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVSADEKRGKGDNMIIERL--KVAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|449883263|ref|ZP_21785040.1| GTP-binding protein Era [Streptococcus mutans SA38]
gi|449250128|gb|EMC48207.1| GTP-binding protein Era [Streptococcus mutans SA38]
Length = 299
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|320106113|ref|YP_004181703.1| GTP-binding protein Era [Terriglobus saanensis SP1PR4]
gi|319924634|gb|ADV81709.1| GTP-binding protein Era [Terriglobus saanensis SP1PR4]
Length = 349
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 159/284 (55%), Gaps = 38/284 (13%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP------------ 161
+SG+V+++G+PN GKSTL N ++G+K++IVT+KPQTTR+RILG+ P
Sbjct: 4 RSGFVSIVGRPNAGKSTLLNALLGEKIAIVTHKPQTTRNRILGVLELPIRKKAAKDPGRG 63
Query: 162 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEIL-- 216
Q++L DTPG+ + H LD MM+ V A + D ++ +VDA A + D+
Sbjct: 64 AAQVVLVDTPGVHKPSSH-LDKRMMQEVYDALESRDVVLFIVDATHRLPAESKSDKPFTR 122
Query: 217 -EEGVGDHKDKL----------PILLVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVS 264
+ + +D P+LLVLNK D + E+ + W EK+ + EVIP+S
Sbjct: 123 DRKAMSAEEDTFALSLLKNVDSPVLLVLNKIDSVPRAELLPLIAHWSEKY-NFAEVIPIS 181
Query: 265 AKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQ 324
AK G+E + D ++ +LP G Y+PKD +++ PERF E+IREKI M EVPYA
Sbjct: 182 AKKKDGLEVLLDAVVKRLPEGQRYFPKDQLTDQPERFLAAELIREKILMFTGEEVPYASA 241
Query: 325 VNVVSY-----KTRPTAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
V V ++ KT P K I I VE+ QK I+IG+ L
Sbjct: 242 VVVEAWEEAKSKTNPLTK--ISAAIYVERTGQKAIVIGRAGAML 283
>gi|407718404|ref|YP_006795809.1| GTP-binding protein [Leuconostoc carnosum JB16]
gi|407242160|gb|AFT81810.1| GTP-binding protein [Leuconostoc carnosum JB16]
Length = 303
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 151/246 (61%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I + DA R D+ + + + D K+ PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFIADASMPRGRGDDFIIDRLKDVKNT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y E D EV P+SA+ G V ++ I+ L GP Y+ D
Sbjct: 125 NKVDLVSPQDLLTIIASYQEDAIDWTEVFPISAREGDNVPELLGNIVDSLDEGPQYFDAD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKIARENEEKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|262373077|ref|ZP_06066356.1| GTP-binding protein Era [Acinetobacter junii SH205]
gi|262313102|gb|EEY94187.1| GTP-binding protein Era [Acinetobacter junii SH205]
Length = 341
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 149/258 (57%), Gaps = 15/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K + DE++ E + + ++P++L
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--EMPVIL 151
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E + K D E++PVSA G +E +RD I LP Y
Sbjct: 152 VINKLDTFENKNEALPLIRERAKLMDFAEIVPVSALRGANLEHLRDTIEKYLPYQAPLYS 211
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT + +
Sbjct: 212 LDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPPCTY 271
Query: 340 IQVEIVVEKNSQKIILIG 357
I I VE+ QK I+IG
Sbjct: 272 IDATIFVERQGQKAIVIG 289
>gi|160890562|ref|ZP_02071565.1| hypothetical protein BACUNI_03005 [Bacteroides uniformis ATCC 8492]
gi|270295702|ref|ZP_06201902.1| GTP-binding protein Era [Bacteroides sp. D20]
gi|317479894|ref|ZP_07939010.1| GTP-binding protein Era [Bacteroides sp. 4_1_36]
gi|156859561|gb|EDO52992.1| ribosome biogenesis GTPase Era [Bacteroides uniformis ATCC 8492]
gi|270273106|gb|EFA18968.1| GTP-binding protein Era [Bacteroides sp. D20]
gi|316903941|gb|EFV25779.1| GTP-binding protein Era [Bacteroides sp. 4_1_36]
Length = 293
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 156/246 (63%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ ++ +E+ VG H D +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADVLLYVTDVVETPDKHNDFVEK-VG-HLD-VPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E +++ E+IP+SA V+ + + LP P Y+ KD
Sbjct: 118 INKIDLSNQEKLVELVEAWKELLPKAEIIPISATSKFNVDYVMKRVKELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVTEIIREKILLYYDKEIPYSVEVMVEQFK-EEAKKIHISAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|449896752|ref|ZP_21789912.1| GTP-binding protein Era [Streptococcus mutans R221]
gi|449261717|gb|EMC59183.1| GTP-binding protein Era [Streptococcus mutans R221]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKRGAML 251
>gi|383451484|ref|YP_005358205.1| GTP-binding protein Era [Flavobacterium indicum GPTSA100-9]
gi|380503106|emb|CCG54148.1| GTP-binding protein Era [Flavobacterium indicum GPTSA100-9]
Length = 294
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 157/249 (63%), Gaps = 11/249 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+G+V ++G PNVGKSTL N M+G++LSI+T+K QTTRHRI GI + +YQ++ DTP
Sbjct: 2 SHKAGFVNIIGNPNVGKSTLMNAMVGERLSIITSKAQTTRHRIFGIVNEEDYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L S MM V++A +AD ++ +V+ + + + + + K+P+LL
Sbjct: 62 GII-KPAYELQSSMMDFVKTAFTDADILIYMVEVGEKELKDEAFFTKII---HAKVPVLL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+LNK D + ++++ W EK + E+ P+SA VE + + I LP P +YP
Sbjct: 118 LLNKIDKSNQELLEEQVQLWKEKVPNA-EIYPISALENFNVETVYNRIKELLPESPPFYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEK 348
KD +++ ERFFV E IREKI + Y E+PY+C+ V + ++ I+++ I+VE+
Sbjct: 177 KDQLTDKTERFFVNETIREKILLNYDKEIPYSCE---VETEEFKEEENIIRIKSVIMVER 233
Query: 349 NSQKIILIG 357
+QK I+IG
Sbjct: 234 ETQKGIIIG 242
>gi|374598815|ref|ZP_09671817.1| GTP-binding protein Era-like-protein [Myroides odoratus DSM 2801]
gi|423322993|ref|ZP_17300835.1| GTP-binding protein Era [Myroides odoratimimus CIP 103059]
gi|373910285|gb|EHQ42134.1| GTP-binding protein Era-like-protein [Myroides odoratus DSM 2801]
gi|404610014|gb|EKB09372.1| GTP-binding protein Era [Myroides odoratimimus CIP 103059]
Length = 295
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 152/247 (61%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G++LSI+T+K QTTRHRILGI + EYQ++ DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNEEEYQIVFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKLPIL 230
II K + L + MM V+SA +AD ++ +V+ + E+ +E + K+PIL
Sbjct: 63 II-KPAYELQASMMDFVKSAFEDADVLIYMVEVGE-----KELKDEAFFNRIIHSKVPIL 116
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L+LNK D ++ +++E + E+ P+SA + + D IL +P P YY
Sbjct: 117 LLLNKIDKSNQVQLEEQVELWTSKVPNAEIFPISALEKFNTQAVFDRILELIPESPPYYA 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ ERFFV EIIREKI + Y E+PYA +V + I+ I+VE+++
Sbjct: 177 KDALTDKSERFFVNEIIREKILLNYDKEIPYAVEVETEEFLEEEEIIR-IKAIIMVERDT 235
Query: 351 QKIILIG 357
QK ILIG
Sbjct: 236 QKGILIG 242
>gi|387785695|ref|YP_006250791.1| GTP-binding protein [Streptococcus mutans LJ23]
gi|449910031|ref|ZP_21794494.1| GTP-binding protein Era [Streptococcus mutans OMZ175]
gi|449926838|ref|ZP_21800951.1| GTP-binding protein Era [Streptococcus mutans 4SM1]
gi|450086706|ref|ZP_21853839.1| GTP-binding protein Era [Streptococcus mutans NV1996]
gi|379132096|dbj|BAL68848.1| GTP-binding protein [Streptococcus mutans LJ23]
gi|449160233|gb|EMB63510.1| GTP-binding protein Era [Streptococcus mutans 4SM1]
gi|449219147|gb|EMC19125.1| GTP-binding protein Era [Streptococcus mutans NV1996]
gi|449260443|gb|EMC57943.1| GTP-binding protein Era [Streptococcus mutans OMZ175]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|322372543|ref|ZP_08047079.1| GTP-binding protein Era [Streptococcus sp. C150]
gi|321277585|gb|EFX54654.1| GTP-binding protein Era [Streptococcus sp. C150]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKKGAML 251
>gi|220932088|ref|YP_002508996.1| GTP-binding protein Era [Halothermothrix orenii H 168]
gi|259645948|sp|B8CXI2.1|ERA_HALOH RecName: Full=GTPase Era
gi|219993398|gb|ACL70001.1| GTP-binding protein Era [Halothermothrix orenii H 168]
Length = 294
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 4/246 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG+V+V+G+PNVGKSTL N +IGQK+ I + +PQTTR+ + GI + PE Q++ DTP
Sbjct: 2 SYKSGFVSVIGRPNVGKSTLINNLIGQKVVITSPRPQTTRNSVRGIYTRPEGQIVFVDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K + LD+ M++ + + D I+ +VD + + DE + + ++P+++
Sbjct: 62 GI-HKARNKLDNYMLEKAYESLEDIDVIIFMVDGNYSFGKGDEFIYNQI--KGVRVPVIV 118
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D I + ++ + YE+ T VIP+SA G ++ + + I T LP GP YYP+
Sbjct: 119 AMNKIDRINKEIVMERQKNYEERTGFP-VIPISASRGTNLDTLVEEIFTFLPEGPQYYPE 177
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D+V++ E+F V E+IREK+F+ R EVPY V + K R + +I+ I EK S
Sbjct: 178 DMVTDQIEQFVVAELIREKVFILTREEVPYGVAVKIEEMKERDNSTMYIRANIYAEKKSH 237
Query: 352 KIILIG 357
K I+IG
Sbjct: 238 KKIIIG 243
>gi|307708604|ref|ZP_07645068.1| GTP-binding protein Era [Streptococcus mitis NCTC 12261]
gi|307615353|gb|EFN94562.1| GTP-binding protein Era [Streptococcus mitis NCTC 12261]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKIPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|339017984|ref|ZP_08644128.1| GTP-binding protein Era [Acetobacter tropicalis NBRC 101654]
gi|338752873|dbj|GAA07432.1| GTP-binding protein Era [Acetobacter tropicalis NBRC 101654]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 139/252 (55%), Gaps = 17/252 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+ A++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q++L DTPGI
Sbjct: 6 RCGFAALVGAPNAGKSTLLNRMTGAKLSIVSPKAQTTRFRVLGILMREHTQILLVDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP----- 228
+ LD M+ + +AD ++LVDA L E V + D+L
Sbjct: 66 FRPR-RKLDRAMVAAAWTGSDDADITLLLVDAKSG-------LTEAVAEIIDRLAKAGRK 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWY--EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
I LVLNK DL+ P E+ L EK T V+ V VSA+ G GV D+ D + LP GP
Sbjct: 118 IWLVLNKTDLVTP-EVLLPLTAAITEKLT-VEHVFMVSARSGSGVADLLDRLAENLPEGP 175
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YP+D +++ P+R E++RE+IFMQ EVPY V SYK RP I I V
Sbjct: 176 YLYPEDDLTDLPDRLLAAELVREQIFMQTHEEVPYGATVETESYKERPDGSVRIDATIYV 235
Query: 347 EKNSQKIILIGK 358
+ K ILIG+
Sbjct: 236 SRAGHKAILIGE 247
>gi|258645786|ref|ZP_05733255.1| GTP-binding protein Era [Dialister invisus DSM 15470]
gi|260403157|gb|EEW96704.1| GTP-binding protein Era [Dialister invisus DSM 15470]
Length = 300
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 154/259 (59%), Gaps = 23/259 (8%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N ++G+K+SIV+ QTTR++I G+ +G Q++ DTPG+
Sbjct: 8 SGFVALVGRPNVGKSTLMNAVLGEKVSIVSAHAQTTRNKITGVWNGKNSQVVFLDTPGM- 66
Query: 175 EKKIHMLDSMMMKNVRSAGINA---DCIVVLVDACKAPERIDEILEEGVGDH------KD 225
H S + + +R + ++A ++V + AC P G GD KD
Sbjct: 67 ----HKPQSKLGQVIRQSTVDALDEVDVIVFICACNDPL--------GAGDRYILNLLKD 114
Query: 226 K-LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K +P++LVL+K DLIK + KK+ Y + E+IP+SA+ G +++ + LP
Sbjct: 115 KKVPVVLVLSKIDLIKKDMLLKKIGQYSRIHPFSEIIPLSARSGENLKEFTTVLERYLPE 174
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP Y+P D+V++ PER V EI+REK+ ++ R EVP+A V + R K +I+ I
Sbjct: 175 GPKYFPDDMVTDQPERNIVQEIVREKLLLRTREEVPHAIGVFTEEFSERENGKVYIRCTI 234
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 235 YVERDSQKRIIIGRKGTLL 253
>gi|169331621|ref|ZP_02860814.1| hypothetical protein ANASTE_00005 [Anaerofustis stercorihominis DSM
17244]
gi|169259683|gb|EDS73649.1| ribosome biogenesis GTPase Era [Anaerofustis stercorihominis DSM
17244]
Length = 302
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+ N KSG+++++G+ NVGKSTL N ++GQK+SIV+N+PQTTR+ I I + QM+ D
Sbjct: 2 NNNFKSGFISIVGRTNVGKSTLLNLLLGQKISIVSNRPQTTRNNIRCIRTTGTSQMVFID 61
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGIN---ADCIVVLVDACKAPERIDEILEEGVGDHKDK 226
TPG + K + D M V AG + D I+ LV+ + DE L E + K+K
Sbjct: 62 TPGFHKPKSKLSDYM----VEVAGESYKEVDVILFLVEEDTTIGKGDEFLIEKL--KKEK 115
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P++LV+NK D I EI K++ YEK+ + E++P+SA G + ++ + I LP GP
Sbjct: 116 TPVILVINKIDKITKEEILGKIKLYEKYDFIKEIVPISAMKGENINELVEVIEKYLPQGP 175
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF--IQVEI 344
Y+P+D+V++ ERF + E+IREKI + E+P+ V V+ K R KD I+ I
Sbjct: 176 MYFPEDMVTDRSERFVISELIREKILRSLKEEIPHGTAVEVMLMKKR-NNKDLYDIEANI 234
Query: 345 VVEKNSQKIILIGKVSPFL 363
E+ + K I+IGK L
Sbjct: 235 YTERENHKRIIIGKNGSML 253
>gi|419479796|ref|ZP_14019603.1| GTP-binding protein Era [Streptococcus pneumoniae GA19101]
gi|419499486|ref|ZP_14039185.1| GTP-binding protein Era [Streptococcus pneumoniae GA47597]
gi|379570962|gb|EHZ35921.1| GTP-binding protein Era [Streptococcus pneumoniae GA19101]
gi|379602540|gb|EHZ67311.1| GTP-binding protein Era [Streptococcus pneumoniae GA47597]
gi|429317780|emb|CCP37582.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN034156]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|157151336|ref|YP_001450014.1| GTP-binding protein Era [Streptococcus gordonii str. Challis
substr. CH1]
gi|3334174|sp|O24756.1|ERA_STRGC RecName: Full=GTPase Era
gi|2627217|dbj|BAA23582.1| GTP-binding protein [Streptococcus gordonii]
gi|157076130|gb|ABV10813.1| GTP-binding protein Era [Streptococcus gordonii str. Challis
substr. CH1]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|397650217|ref|YP_006490744.1| GTPase Era [Streptococcus mutans GS-5]
gi|449877300|ref|ZP_21783196.1| GTP-binding protein Era [Streptococcus mutans S1B]
gi|449885634|ref|ZP_21785703.1| GTP-binding protein Era [Streptococcus mutans SA41]
gi|449902407|ref|ZP_21791556.1| GTP-binding protein Era [Streptococcus mutans M230]
gi|449984558|ref|ZP_21819133.1| GTP-binding protein Era [Streptococcus mutans NFSM2]
gi|450039280|ref|ZP_21836159.1| GTP-binding protein Era [Streptococcus mutans T4]
gi|450046315|ref|ZP_21838872.1| GTP-binding protein Era [Streptococcus mutans N34]
gi|450062940|ref|ZP_21844661.1| GTP-binding protein Era [Streptococcus mutans NLML5]
gi|392603786|gb|AFM81950.1| GTPase Era [Streptococcus mutans GS-5]
gi|449180137|gb|EMB82313.1| GTP-binding protein Era [Streptococcus mutans NFSM2]
gi|449199091|gb|EMC00175.1| GTP-binding protein Era [Streptococcus mutans N34]
gi|449200619|gb|EMC01643.1| GTP-binding protein Era [Streptococcus mutans T4]
gi|449205207|gb|EMC05964.1| GTP-binding protein Era [Streptococcus mutans NLML5]
gi|449251048|gb|EMC49079.1| GTP-binding protein Era [Streptococcus mutans S1B]
gi|449255045|gb|EMC52924.1| GTP-binding protein Era [Streptococcus mutans SA41]
gi|449262805|gb|EMC60246.1| GTP-binding protein Era [Streptococcus mutans M230]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|339497569|ref|ZP_08658545.1| GTPase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 303
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 151/246 (61%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I + DA R D+ + E + + K+ PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVADASMPRGRGDDFIIERLKEVKNT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y E + EV P+SA G V ++ D I+ L GP Y+ D
Sbjct: 125 NKIDLLSPKDLLNVIASYQENAPEWTEVFPISATEGDNVPELLDNIVANLDEGPQYFDSD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKIAREDEEKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|421206421|ref|ZP_15663482.1| GTP-binding protein Era [Streptococcus pneumoniae 2090008]
gi|421229614|ref|ZP_15686286.1| GTP-binding protein Era [Streptococcus pneumoniae 2061376]
gi|421291842|ref|ZP_15742580.1| GTP-binding protein Era [Streptococcus pneumoniae GA56348]
gi|395576335|gb|EJG36891.1| GTP-binding protein Era [Streptococcus pneumoniae 2090008]
gi|395596275|gb|EJG56495.1| GTP-binding protein Era [Streptococcus pneumoniae 2061376]
gi|395894059|gb|EJH05040.1| GTP-binding protein Era [Streptococcus pneumoniae GA56348]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKIPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMLREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|33866147|ref|NP_897706.1| GTP-binding protein Era [Synechococcus sp. WH 8102]
gi|33639122|emb|CAE08128.1| GTP-binding protein ERA homolog [Synechococcus sp. WH 8102]
Length = 311
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 154/267 (57%), Gaps = 12/267 (4%)
Query: 105 FDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 164
+S NH+SG++A++G+PNVGKSTL NQ++G+K++I + QTTR+R+ I + + Q
Sbjct: 2 LSTSSSENHRSGFIALIGRPNVGKSTLVNQLVGEKVAITSPVAQTTRNRLRAILTTEDAQ 61
Query: 165 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 224
M+L DTPG I K H+L ++++ RSA D +V+L++ C+ P R D + + + +
Sbjct: 62 MVLVDTPG-IHKPHHLLGERLVQSARSAIGEVDLVVLLLEGCERPGRGDAFIVKLL--RQ 118
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV---SAKYGHGVEDIRDWILTK 281
LP+L+ LNK D + A+ Y + + P+ SA G G + + +
Sbjct: 119 QPLPVLVALNKWDKLPEDRQAEAEAAYGELLK-ETAWPIHRCSALSGEGCSALSSAMAAQ 177
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----A 336
LPLGP YP ++VS+ PER +GE+IRE++ + R E+P++ V + + P
Sbjct: 178 LPLGPQLYPPEMVSDQPERVLMGELIREQVLLHTREEIPHSVAVTIDRVEELPAGGKGGG 237
Query: 337 KDFIQVEIVVEKNSQKIILIGKVSPFL 363
+ + ++VE+ SQK ILIGK L
Sbjct: 238 RTAVLATVMVERKSQKGILIGKGGAML 264
>gi|329114469|ref|ZP_08243231.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001]
gi|421848391|ref|ZP_16281379.1| GTP-binding protein Era [Acetobacter pasteurianus NBRC 101655]
gi|421852371|ref|ZP_16285060.1| GTP-binding protein Era [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|326696545|gb|EGE48224.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001]
gi|371460752|dbj|GAB26582.1| GTP-binding protein Era [Acetobacter pasteurianus NBRC 101655]
gi|371479451|dbj|GAB30263.1| GTP-binding protein Era [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 300
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 136/244 (55%), Gaps = 3/244 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+ A++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q++L DTPGI
Sbjct: 7 RCGFAALVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGHSQILLVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ LD M+ + +AD ++LVDA + + E + + K K + LVL
Sbjct: 67 FRPR-RKLDRAMVAAAWTGAEDADITLLLVDARSGLTEAVQTIIERLAETKRK--VWLVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ + + V+ V VSA+ G+GVED+ D + LP GP YP+D
Sbjct: 124 NKTDLVPATALLPLTASITEKLPVEHVFMVSARTGNGVEDLLDKLAASLPEGPYLYPEDD 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R E++RE+IFMQ EVPY+ V SYK RP I I V + K
Sbjct: 184 LTDLPDRLLAAELVREQIFMQTHEEVPYSATVETESYKERPDGSVRIDATIYVSRAGHKA 243
Query: 354 ILIG 357
ILIG
Sbjct: 244 ILIG 247
>gi|317504952|ref|ZP_07962901.1| GTP-binding protein Era [Prevotella salivae DSM 15606]
gi|315663944|gb|EFV03662.1| GTP-binding protein Era [Prevotella salivae DSM 15606]
Length = 293
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTEDCQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L++ + +P++L+
Sbjct: 62 VLKPNYKM-QEMMLAFSESALKDADILLYVTDVVENPEKNIDFLDKV---KQLPIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ + + E++P+SAK GVE + I LP PAY+ KD
Sbjct: 118 INKIDESNQKELGTIVTKWHSLLPNAEILPISAKNKFGVELLMKRIKELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV E+IREKI + Y E+PY+ +V V +K T+ I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEMIREKILLYYDKEIPYSVEVRVEQFKETDTSIH-INAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|167765448|ref|ZP_02437561.1| hypothetical protein BACSTE_03838 [Bacteroides stercoris ATCC
43183]
gi|167697076|gb|EDS13655.1| ribosome biogenesis GTPase Era [Bacteroides stercoris ATCC 43183]
Length = 293
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + L M+ SA +AD ++ + D + P++ ++ +E+ + ++P+LL+
Sbjct: 62 VL-KPTYKLQESMLNFSSSALTDADVLLYVTDVVETPDKHNDFVEKV---SRMEVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 VNKIDLSNQEKLVELVEAWKELLPNAEIIPISAATKFNVDYVMKRIKELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEQFKEE-EKKIHINAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|146319051|ref|YP_001198763.1| GTP-binding protein Era [Streptococcus suis 05ZYH33]
gi|146321257|ref|YP_001200968.1| GTP-binding protein Era [Streptococcus suis 98HAH33]
gi|223932650|ref|ZP_03624649.1| GTP-binding protein Era [Streptococcus suis 89/1591]
gi|253752114|ref|YP_003025255.1| GTP-binding protein Era [Streptococcus suis SC84]
gi|253753939|ref|YP_003027080.1| GTP-binding protein Era [Streptococcus suis P1/7]
gi|253755186|ref|YP_003028326.1| GTP-binding protein Era [Streptococcus suis BM407]
gi|330832408|ref|YP_004401233.1| GTP-binding protein Era [Streptococcus suis ST3]
gi|386578233|ref|YP_006074639.1| Small GTP-binding protein Era [Streptococcus suis GZ1]
gi|386580298|ref|YP_006076703.1| GTP-binding protein Era [Streptococcus suis JS14]
gi|386582313|ref|YP_006078717.1| GTP-binding protein Era [Streptococcus suis SS12]
gi|386583669|ref|YP_006080072.1| GTP-binding protein Era [Streptococcus suis D9]
gi|386588500|ref|YP_006084901.1| GTP-binding protein Era [Streptococcus suis A7]
gi|403061869|ref|YP_006650085.1| GTPase Era [Streptococcus suis S735]
gi|189037678|sp|A4W2H9.1|ERA_STRS2 RecName: Full=GTPase Era
gi|189037680|sp|A4VW74.1|ERA_STRSY RecName: Full=GTPase Era
gi|145689857|gb|ABP90363.1| GTPase [Streptococcus suis 05ZYH33]
gi|145692063|gb|ABP92568.1| GTPase [Streptococcus suis 98HAH33]
gi|223898620|gb|EEF64982.1| GTP-binding protein Era [Streptococcus suis 89/1591]
gi|251816403|emb|CAZ52034.1| GTP-binding protein Era homolog [Streptococcus suis SC84]
gi|251817650|emb|CAZ55398.1| GTP-binding protein Era homolog [Streptococcus suis BM407]
gi|251820185|emb|CAR46552.1| GTP-binding protein Era homolog [Streptococcus suis P1/7]
gi|292558696|gb|ADE31697.1| Small GTP-binding protein Era [Streptococcus suis GZ1]
gi|319758490|gb|ADV70432.1| GTP-binding protein Era [Streptococcus suis JS14]
gi|329306631|gb|AEB81047.1| GTP-binding protein Era [Streptococcus suis ST3]
gi|353734459|gb|AER15469.1| GTP-binding protein Era [Streptococcus suis SS12]
gi|353735815|gb|AER16824.1| GTP-binding protein Era [Streptococcus suis D9]
gi|354985661|gb|AER44559.1| GTP-binding protein Era [Streptococcus suis A7]
gi|402809195|gb|AFR00687.1| GTPase Era [Streptococcus suis S735]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + D E++P+SA G+ V + + + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRQQMDFKEIVPISATQGNNVNRLMEILKENLDEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDEFTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|399023667|ref|ZP_10725722.1| GTP-binding protein Era [Chryseobacterium sp. CF314]
gi|398082366|gb|EJL73120.1| GTP-binding protein Era [Chryseobacterium sp. CF314]
Length = 291
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 150/246 (60%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEEDLQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ K + L MM V+ + +AD + +VD E + ++E+ +K +P+LL+
Sbjct: 62 VLDPK-YGLQEKMMDFVKDSLQDADVFLFIVDVTDKAEPSEFLIEKL---NKIPVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D + K +E W+ + E++P+SA E I + + LP P YY K
Sbjct: 118 LNKVDQTDQAGLEKLVEDWHNRIPKA-EILPISALNAFNTEVILPKLKSMLPENPPYYDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D+ ++ PERFFV E IREKI + Y E+PY+ +V +K + FI I VE+++Q
Sbjct: 177 DMYTDKPERFFVNEAIREKILLNYDKEIPYSVEVVTEQFKEKEGII-FIDSIIYVERDTQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|423304012|ref|ZP_17282011.1| GTP-binding protein Era [Bacteroides uniformis CL03T00C23]
gi|423307264|ref|ZP_17285254.1| GTP-binding protein Era [Bacteroides uniformis CL03T12C37]
gi|392685940|gb|EIY79248.1| GTP-binding protein Era [Bacteroides uniformis CL03T00C23]
gi|392690516|gb|EIY83779.1| GTP-binding protein Era [Bacteroides uniformis CL03T12C37]
Length = 314
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 156/246 (63%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 23 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 82
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ ++ +E+ VG H D +P+LL+
Sbjct: 83 VLKPNYKLQESMLNFST-SALADADVLLYVTDVVETPDKHNDFVEK-VG-HLD-VPVLLL 138
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E +++ E+IP+SA V+ + + LP P Y+ KD
Sbjct: 139 INKIDLSNQEKLVELVEAWKELLPKAEIIPISATSKFNVDYVMKRVKELLPDSPPYFDKD 198
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 199 QWTDKPARFFVTEIIREKILLYYDKEIPYSVEVMVEQFK-EEAKKIHISAVIYVERDSQK 257
Query: 353 IILIGK 358
I+IGK
Sbjct: 258 GIIIGK 263
>gi|406039702|ref|ZP_11047057.1| GTPase Era [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 349
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 150/258 (58%), Gaps = 15/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ +SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 43 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 102
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K + DE++ E + + ++P++L
Sbjct: 103 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDAQKWTQN-DELVLEKLKNA--EMPVIL 159
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + E + K + E++PVSA G ++ +RD I LP P Y
Sbjct: 160 VINKLDTFENKNEALPLIRERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPFQPPLYS 219
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 220 MDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEETISEKTGRLKPACTY 279
Query: 340 IQVEIVVEKNSQKIILIG 357
I I VE+ QK I+IG
Sbjct: 280 IDATIFVERAGQKAIVIG 297
>gi|336426709|ref|ZP_08606718.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336010725|gb|EGN40707.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 312
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 154/269 (57%), Gaps = 13/269 (4%)
Query: 101 EIEEFDYASHP---NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGI 157
++EE A P +KSG+ ++G+PNVGKSTL N+++GQK+SI +NKPQTTR+RI +
Sbjct: 2 DLEELLAAGRPLNEKYKSGFATLIGRPNVGKSTLMNRLVGQKISITSNKPQTTRNRIQAV 61
Query: 158 CSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDE 214
+ E Q++ DTPGI K + L + M+K + D I+ LV+ A ER
Sbjct: 62 YTSEEGQIVFLDTPGINRAK-NKLGNYMLKAAEGTLRDVDVILWLVEPTTYIGAGERY-- 118
Query: 215 ILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDI 274
I+E+ K K P++LV+NK D +K ++ ++ Y K D EV+PVSA+ G + +
Sbjct: 119 IIEQL---KKTKTPVILVINKTDTVKKDDVFPAIDTYRKELDFAEVVPVSARCGTNTDTL 175
Query: 275 RDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP 334
IL LP G +Y +D V++ PER V E+IREK E+P+ V + S K R
Sbjct: 176 ISCILKYLPYGQPFYDEDTVTDQPERQIVAELIREKALRSLDEEIPHGIAVAIESMKYRK 235
Query: 335 TAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
D I+ I+ EK+S K I+IGK L
Sbjct: 236 NIAD-IEATIICEKDSHKGIIIGKGGQML 263
>gi|449951164|ref|ZP_21808545.1| GTP-binding protein Era [Streptococcus mutans 11SSST2]
gi|449166521|gb|EMB69455.1| GTP-binding protein Era [Streptococcus mutans 11SSST2]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFIVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|15900846|ref|NP_345450.1| GTP-binding protein Era [Streptococcus pneumoniae TIGR4]
gi|15902915|ref|NP_358465.1| GTP-binding protein Era [Streptococcus pneumoniae R6]
gi|111657969|ref|ZP_01408676.1| hypothetical protein SpneT_02000858 [Streptococcus pneumoniae
TIGR4]
gi|116516762|ref|YP_816339.1| GTP-binding protein Era [Streptococcus pneumoniae D39]
gi|148984711|ref|ZP_01817979.1| GTP-binding protein Era [Streptococcus pneumoniae SP3-BS71]
gi|148992896|ref|ZP_01822515.1| GTP-binding protein Era [Streptococcus pneumoniae SP9-BS68]
gi|148998595|ref|ZP_01826035.1| GTP-binding protein Era [Streptococcus pneumoniae SP11-BS70]
gi|149002520|ref|ZP_01827454.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS69]
gi|149010385|ref|ZP_01831756.1| GTP-binding protein Era [Streptococcus pneumoniae SP19-BS75]
gi|168483038|ref|ZP_02707990.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1873-00]
gi|168490212|ref|ZP_02714411.1| GTP-binding protein Era [Streptococcus pneumoniae SP195]
gi|168491058|ref|ZP_02715201.1| GTP-binding protein Era [Streptococcus pneumoniae CDC0288-04]
gi|168494398|ref|ZP_02718541.1| GTP-binding protein Era [Streptococcus pneumoniae CDC3059-06]
gi|168575631|ref|ZP_02721567.1| GTP-binding protein Era [Streptococcus pneumoniae MLV-016]
gi|182683915|ref|YP_001835662.1| GTP-binding protein Era [Streptococcus pneumoniae CGSP14]
gi|225856627|ref|YP_002738138.1| GTP-binding protein Era [Streptococcus pneumoniae P1031]
gi|225858762|ref|YP_002740272.1| GTP-binding protein Era [Streptococcus pneumoniae 70585]
gi|225861144|ref|YP_002742653.1| GTP-binding protein Era [Streptococcus pneumoniae Taiwan19F-14]
gi|237650882|ref|ZP_04525134.1| GTP-binding protein Era [Streptococcus pneumoniae CCRI 1974]
gi|237821333|ref|ZP_04597178.1| GTP-binding protein Era [Streptococcus pneumoniae CCRI 1974M2]
gi|298229555|ref|ZP_06963236.1| GTP-binding protein Era [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254476|ref|ZP_06978062.1| GTP-binding protein Era [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503021|ref|YP_003724961.1| GTP-binding protein Era [Streptococcus pneumoniae TCH8431/19A]
gi|303254436|ref|ZP_07340542.1| GTP-binding protein Era [Streptococcus pneumoniae BS455]
gi|303259881|ref|ZP_07345856.1| GTP-binding protein Era [Streptococcus pneumoniae SP-BS293]
gi|303262295|ref|ZP_07348239.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS292]
gi|303264717|ref|ZP_07350635.1| GTP-binding protein Era [Streptococcus pneumoniae BS397]
gi|303267324|ref|ZP_07353184.1| GTP-binding protein Era [Streptococcus pneumoniae BS457]
gi|303269129|ref|ZP_07354908.1| GTP-binding protein Era [Streptococcus pneumoniae BS458]
gi|307067626|ref|YP_003876592.1| GTPase [Streptococcus pneumoniae AP200]
gi|387757356|ref|YP_006064335.1| GTP-binding protein Era [Streptococcus pneumoniae OXC141]
gi|387759223|ref|YP_006066201.1| GTP-binding protein Era [Streptococcus pneumoniae INV200]
gi|387788359|ref|YP_006253427.1| GTP-binding protein Era [Streptococcus pneumoniae ST556]
gi|405761092|ref|YP_006701688.1| GTP-binding protein Era [Streptococcus pneumoniae SPNA45]
gi|410476410|ref|YP_006743169.1| GTP-binding protein Era [Streptococcus pneumoniae gamPNI0373]
gi|417312539|ref|ZP_12099251.1| GTP-binding protein Era [Streptococcus pneumoniae GA04375]
gi|417678923|ref|ZP_12328320.1| GTP-binding protein Era [Streptococcus pneumoniae GA17570]
gi|417686406|ref|ZP_12335684.1| GTP-binding protein Era [Streptococcus pneumoniae GA41301]
gi|417696160|ref|ZP_12345339.1| GTP-binding protein Era [Streptococcus pneumoniae GA47368]
gi|417698383|ref|ZP_12347556.1| GTP-binding protein Era [Streptococcus pneumoniae GA41317]
gi|418073753|ref|ZP_12711011.1| GTP-binding protein Era [Streptococcus pneumoniae GA11184]
gi|418076075|ref|ZP_12713314.1| GTP-binding protein Era [Streptococcus pneumoniae GA47502]
gi|418078462|ref|ZP_12715685.1| GTP-binding protein Era [Streptococcus pneumoniae 4027-06]
gi|418080426|ref|ZP_12717638.1| GTP-binding protein Era [Streptococcus pneumoniae 6735-05]
gi|418082894|ref|ZP_12720095.1| GTP-binding protein Era [Streptococcus pneumoniae GA44288]
gi|418085035|ref|ZP_12722219.1| GTP-binding protein Era [Streptococcus pneumoniae GA47281]
gi|418089365|ref|ZP_12726522.1| GTP-binding protein Era [Streptococcus pneumoniae GA43265]
gi|418091713|ref|ZP_12728855.1| GTP-binding protein Era [Streptococcus pneumoniae GA44452]
gi|418093797|ref|ZP_12730926.1| GTP-binding protein Era [Streptococcus pneumoniae GA49138]
gi|418098342|ref|ZP_12735441.1| GTP-binding protein Era [Streptococcus pneumoniae 6901-05]
gi|418100796|ref|ZP_12737882.1| GTP-binding protein Era [Streptococcus pneumoniae 7286-06]
gi|418105031|ref|ZP_12742090.1| GTP-binding protein Era [Streptococcus pneumoniae GA44500]
gi|418107362|ref|ZP_12744400.1| GTP-binding protein Era [Streptococcus pneumoniae GA41410]
gi|418109935|ref|ZP_12746960.1| GTP-binding protein Era [Streptococcus pneumoniae GA49447]
gi|418114468|ref|ZP_12751458.1| GTP-binding protein Era [Streptococcus pneumoniae 5787-06]
gi|418116708|ref|ZP_12753679.1| GTP-binding protein Era [Streptococcus pneumoniae 6963-05]
gi|418118740|ref|ZP_12755697.1| GTP-binding protein Era [Streptococcus pneumoniae GA18523]
gi|418121038|ref|ZP_12757984.1| GTP-binding protein Era [Streptococcus pneumoniae GA44194]
gi|418125595|ref|ZP_12762505.1| GTP-binding protein Era [Streptococcus pneumoniae GA44511]
gi|418130132|ref|ZP_12767016.1| GTP-binding protein Era [Streptococcus pneumoniae GA07643]
gi|418135030|ref|ZP_12771887.1| GTP-binding protein Era [Streptococcus pneumoniae GA11426]
gi|418139318|ref|ZP_12776148.1| GTP-binding protein Era [Streptococcus pneumoniae GA13338]
gi|418141556|ref|ZP_12778369.1| GTP-binding protein Era [Streptococcus pneumoniae GA13455]
gi|418143781|ref|ZP_12780581.1| GTP-binding protein Era [Streptococcus pneumoniae GA13494]
gi|418146191|ref|ZP_12782973.1| GTP-binding protein Era [Streptococcus pneumoniae GA13637]
gi|418148395|ref|ZP_12785160.1| GTP-binding protein Era [Streptococcus pneumoniae GA13856]
gi|418150434|ref|ZP_12787185.1| GTP-binding protein Era [Streptococcus pneumoniae GA14798]
gi|418152700|ref|ZP_12789440.1| GTP-binding protein Era [Streptococcus pneumoniae GA16121]
gi|418157564|ref|ZP_12794280.1| GTP-binding protein Era [Streptococcus pneumoniae GA16833]
gi|418159638|ref|ZP_12796337.1| GTP-binding protein Era [Streptococcus pneumoniae GA17227]
gi|418162020|ref|ZP_12798707.1| GTP-binding protein Era [Streptococcus pneumoniae GA17328]
gi|418164829|ref|ZP_12801499.1| GTP-binding protein Era [Streptococcus pneumoniae GA17371]
gi|418166596|ref|ZP_12803252.1| GTP-binding protein Era [Streptococcus pneumoniae GA17971]
gi|418169071|ref|ZP_12805715.1| GTP-binding protein Era [Streptococcus pneumoniae GA19077]
gi|418171435|ref|ZP_12808059.1| GTP-binding protein Era [Streptococcus pneumoniae GA19451]
gi|418173341|ref|ZP_12809955.1| GTP-binding protein Era [Streptococcus pneumoniae GA41277]
gi|418175786|ref|ZP_12812383.1| GTP-binding protein Era [Streptococcus pneumoniae GA41437]
gi|418180426|ref|ZP_12816997.1| GTP-binding protein Era [Streptococcus pneumoniae GA41688]
gi|418182599|ref|ZP_12819160.1| GTP-binding protein Era [Streptococcus pneumoniae GA43380]
gi|418186979|ref|ZP_12823508.1| GTP-binding protein Era [Streptococcus pneumoniae GA47360]
gi|418189205|ref|ZP_12825720.1| GTP-binding protein Era [Streptococcus pneumoniae GA47373]
gi|418191516|ref|ZP_12828020.1| GTP-binding protein Era [Streptococcus pneumoniae GA47388]
gi|418193599|ref|ZP_12830091.1| GTP-binding protein Era [Streptococcus pneumoniae GA47439]
gi|418196001|ref|ZP_12832480.1| GTP-binding protein Era [Streptococcus pneumoniae GA47688]
gi|418197793|ref|ZP_12834256.1| GTP-binding protein Era [Streptococcus pneumoniae GA47778]
gi|418200114|ref|ZP_12836559.1| GTP-binding protein Era [Streptococcus pneumoniae GA47976]
gi|418214143|ref|ZP_12840878.1| GTP-binding protein Era [Streptococcus pneumoniae GA54644]
gi|418216420|ref|ZP_12843144.1| GTP-binding protein Era [Streptococcus pneumoniae
Netherlands15B-37]
gi|418218714|ref|ZP_12845381.1| GTP-binding protein Era [Streptococcus pneumoniae NP127]
gi|418221022|ref|ZP_12847676.1| GTP-binding protein Era [Streptococcus pneumoniae GA47751]
gi|418223499|ref|ZP_12850139.1| GTP-binding protein Era [Streptococcus pneumoniae 5185-06]
gi|418227550|ref|ZP_12854169.1| GTP-binding protein Era [Streptococcus pneumoniae 3063-00]
gi|418229714|ref|ZP_12856320.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP01]
gi|418232038|ref|ZP_12858625.1| GTP-binding protein Era [Streptococcus pneumoniae GA07228]
gi|418234167|ref|ZP_12860746.1| GTP-binding protein Era [Streptococcus pneumoniae GA08780]
gi|418236477|ref|ZP_12863045.1| GTP-binding protein Era [Streptococcus pneumoniae GA19690]
gi|418238545|ref|ZP_12865100.1| GTP-binding protein Era [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422764|ref|ZP_13962980.1| GTP-binding protein Era [Streptococcus pneumoniae GA43264]
gi|419424992|ref|ZP_13965191.1| GTP-binding protein Era [Streptococcus pneumoniae 7533-05]
gi|419427364|ref|ZP_13967547.1| GTP-binding protein Era [Streptococcus pneumoniae 5652-06]
gi|419429127|ref|ZP_13969294.1| GTP-binding protein Era [Streptococcus pneumoniae GA11856]
gi|419431368|ref|ZP_13971513.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP05]
gi|419433571|ref|ZP_13973689.1| GTP-binding protein Era [Streptococcus pneumoniae GA40183]
gi|419435833|ref|ZP_13975926.1| GTP-binding protein Era [Streptococcus pneumoniae 8190-05]
gi|419438067|ref|ZP_13978137.1| GTP-binding protein Era [Streptococcus pneumoniae GA13499]
gi|419440188|ref|ZP_13980240.1| GTP-binding protein Era [Streptococcus pneumoniae GA40410]
gi|419442455|ref|ZP_13982486.1| GTP-binding protein Era [Streptococcus pneumoniae GA13224]
gi|419444816|ref|ZP_13984831.1| GTP-binding protein Era [Streptococcus pneumoniae GA19923]
gi|419446960|ref|ZP_13986965.1| GTP-binding protein Era [Streptococcus pneumoniae 7879-04]
gi|419448607|ref|ZP_13988604.1| GTP-binding protein Era [Streptococcus pneumoniae 4075-00]
gi|419451306|ref|ZP_13991292.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP02]
gi|419453343|ref|ZP_13993316.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP03]
gi|419457351|ref|ZP_13997296.1| GTP-binding protein Era [Streptococcus pneumoniae GA02254]
gi|419459813|ref|ZP_13999746.1| GTP-binding protein Era [Streptococcus pneumoniae GA02270]
gi|419462130|ref|ZP_14002040.1| GTP-binding protein Era [Streptococcus pneumoniae GA02714]
gi|419464185|ref|ZP_14004078.1| GTP-binding protein Era [Streptococcus pneumoniae GA04175]
gi|419470924|ref|ZP_14010783.1| GTP-binding protein Era [Streptococcus pneumoniae GA07914]
gi|419477633|ref|ZP_14017458.1| GTP-binding protein Era [Streptococcus pneumoniae GA18068]
gi|419481993|ref|ZP_14021786.1| GTP-binding protein Era [Streptococcus pneumoniae GA40563]
gi|419484165|ref|ZP_14023941.1| GTP-binding protein Era [Streptococcus pneumoniae GA43257]
gi|419489047|ref|ZP_14028797.1| GTP-binding protein Era [Streptococcus pneumoniae GA44386]
gi|419490885|ref|ZP_14030625.1| GTP-binding protein Era [Streptococcus pneumoniae GA47179]
gi|419497153|ref|ZP_14036863.1| GTP-binding protein Era [Streptococcus pneumoniae GA47522]
gi|419501696|ref|ZP_14041382.1| GTP-binding protein Era [Streptococcus pneumoniae GA47628]
gi|419503782|ref|ZP_14043451.1| GTP-binding protein Era [Streptococcus pneumoniae GA47760]
gi|419505903|ref|ZP_14045564.1| GTP-binding protein Era [Streptococcus pneumoniae GA49194]
gi|419508040|ref|ZP_14047693.1| GTP-binding protein Era [Streptococcus pneumoniae GA49542]
gi|419514523|ref|ZP_14054150.1| GTP-binding protein Era [Streptococcus pneumoniae England14-9]
gi|419518759|ref|ZP_14058366.1| GTP-binding protein Era [Streptococcus pneumoniae GA08825]
gi|419520898|ref|ZP_14060494.1| GTP-binding protein Era [Streptococcus pneumoniae GA05245]
gi|419523301|ref|ZP_14062881.1| GTP-binding protein Era [Streptococcus pneumoniae GA13723]
gi|419525717|ref|ZP_14065281.1| GTP-binding protein Era [Streptococcus pneumoniae GA14373]
gi|419527640|ref|ZP_14067183.1| GTP-binding protein Era [Streptococcus pneumoniae GA17719]
gi|419532195|ref|ZP_14071712.1| GTP-binding protein Era [Streptococcus pneumoniae GA47794]
gi|419534436|ref|ZP_14073939.1| GTP-binding protein Era [Streptococcus pneumoniae GA17457]
gi|421211073|ref|ZP_15668057.1| GTP-binding protein Era [Streptococcus pneumoniae 2070035]
gi|421217496|ref|ZP_15674397.1| GTP-binding protein Era [Streptococcus pneumoniae 2070335]
gi|421220119|ref|ZP_15676969.1| GTP-binding protein Era [Streptococcus pneumoniae 2070425]
gi|421222446|ref|ZP_15679237.1| GTP-binding protein Era [Streptococcus pneumoniae 2070531]
gi|421227133|ref|ZP_15683841.1| GTP-binding protein Era [Streptococcus pneumoniae 2072047]
gi|421231742|ref|ZP_15688387.1| GTP-binding protein Era [Streptococcus pneumoniae 2080076]
gi|421238601|ref|ZP_15695169.1| GTP-binding protein Era [Streptococcus pneumoniae 2071247]
gi|421240526|ref|ZP_15697073.1| GTP-binding protein Era [Streptococcus pneumoniae 2080913]
gi|421242917|ref|ZP_15699438.1| GTP-binding protein Era [Streptococcus pneumoniae 2081074]
gi|421244790|ref|ZP_15701291.1| GTP-binding protein Era [Streptococcus pneumoniae 2081685]
gi|421247230|ref|ZP_15703717.1| GTP-binding protein Era [Streptococcus pneumoniae 2082170]
gi|421265994|ref|ZP_15716877.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR27]
gi|421268173|ref|ZP_15719044.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR95]
gi|421270570|ref|ZP_15721426.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR48]
gi|421272623|ref|ZP_15723467.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR55]
gi|421274867|ref|ZP_15725699.1| GTP-binding protein Era [Streptococcus pneumoniae GA52612]
gi|421278745|ref|ZP_15729553.1| GTP-binding protein Era [Streptococcus pneumoniae GA17301]
gi|421280957|ref|ZP_15731755.1| GTP-binding protein Era [Streptococcus pneumoniae GA04672]
gi|421287685|ref|ZP_15738450.1| GTP-binding protein Era [Streptococcus pneumoniae GA58771]
gi|421294389|ref|ZP_15745112.1| GTP-binding protein Era [Streptococcus pneumoniae GA56113]
gi|421296037|ref|ZP_15746749.1| GTP-binding protein Era [Streptococcus pneumoniae GA58581]
gi|421300837|ref|ZP_15751507.1| GTP-binding protein Era [Streptococcus pneumoniae GA19998]
gi|421307244|ref|ZP_15757888.1| GTP-binding protein Era [Streptococcus pneumoniae GA60132]
gi|421309407|ref|ZP_15760034.1| GTP-binding protein Era [Streptococcus pneumoniae GA62681]
gi|421311711|ref|ZP_15762318.1| GTP-binding protein Era [Streptococcus pneumoniae GA58981]
gi|421314136|ref|ZP_15764726.1| GTP-binding protein Era [Streptococcus pneumoniae GA47562]
gi|444388419|ref|ZP_21186404.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS125219]
gi|444389898|ref|ZP_21187813.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS70012]
gi|444393380|ref|ZP_21191032.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS81218]
gi|444395869|ref|ZP_21193408.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0002]
gi|444397428|ref|ZP_21194911.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0006]
gi|444400519|ref|ZP_21197913.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0007]
gi|444401919|ref|ZP_21199098.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0008]
gi|444405242|ref|ZP_21202158.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0009]
gi|444408644|ref|ZP_21205277.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0010]
gi|444409452|ref|ZP_21206044.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0076]
gi|444411676|ref|ZP_21208004.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0153]
gi|444415963|ref|ZP_21212177.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0199]
gi|444418614|ref|ZP_21214585.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0360]
gi|444421221|ref|ZP_21216969.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0427]
gi|444422362|ref|ZP_21218019.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0446]
gi|61223691|sp|P0A3C3.1|ERA_STRPN RecName: Full=GTPase Era
gi|61223692|sp|P0A3C4.1|ERA_STRR6 RecName: Full=GTPase Era
gi|122278775|sp|Q04KV9.1|ERA_STRP2 RecName: Full=GTPase Era
gi|226741242|sp|B2IPC3.1|ERA_STRPS RecName: Full=GTPase Era
gi|254783665|sp|C1C6U6.1|ERA_STRP7 RecName: Full=GTPase Era
gi|254783669|sp|C1CK50.1|ERA_STRZP RecName: Full=GTPase Era
gi|254783670|sp|C1CRT1.1|ERA_STRZT RecName: Full=GTPase Era
gi|5305399|gb|AAD41632.1|AF072811_1 GTPase Era [Streptococcus pneumoniae]
gi|14972444|gb|AAK75090.1| GTP-binding protein Era [Streptococcus pneumoniae TIGR4]
gi|15458475|gb|AAK99675.1| GTPase/GTP-binding protein [Streptococcus pneumoniae R6]
gi|116077338|gb|ABJ55058.1| GTP-binding protein Era [Streptococcus pneumoniae D39]
gi|147755593|gb|EDK62640.1| GTP-binding protein Era [Streptococcus pneumoniae SP11-BS70]
gi|147759457|gb|EDK66449.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS69]
gi|147764866|gb|EDK71795.1| GTP-binding protein Era [Streptococcus pneumoniae SP19-BS75]
gi|147923102|gb|EDK74217.1| GTP-binding protein Era [Streptococcus pneumoniae SP3-BS71]
gi|147928348|gb|EDK79364.1| GTP-binding protein Era [Streptococcus pneumoniae SP9-BS68]
gi|172043458|gb|EDT51504.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1873-00]
gi|182629249|gb|ACB90197.1| GTP-binding protein Era [Streptococcus pneumoniae CGSP14]
gi|183571455|gb|EDT91983.1| GTP-binding protein Era [Streptococcus pneumoniae SP195]
gi|183574573|gb|EDT95101.1| GTP-binding protein Era [Streptococcus pneumoniae CDC0288-04]
gi|183575685|gb|EDT96213.1| GTP-binding protein Era [Streptococcus pneumoniae CDC3059-06]
gi|183578605|gb|EDT99133.1| GTP-binding protein Era [Streptococcus pneumoniae MLV-016]
gi|225720717|gb|ACO16571.1| GTP-binding protein Era [Streptococcus pneumoniae 70585]
gi|225725237|gb|ACO21089.1| GTP-binding protein Era [Streptococcus pneumoniae P1031]
gi|225726867|gb|ACO22718.1| GTP-binding protein Era [Streptococcus pneumoniae Taiwan19F-14]
gi|298238616|gb|ADI69747.1| GTP-binding protein Era [Streptococcus pneumoniae TCH8431/19A]
gi|301799945|emb|CBW32528.1| GTP-binding protein Era homolog [Streptococcus pneumoniae OXC141]
gi|301801812|emb|CBW34523.1| GTP-binding protein Era homolog [Streptococcus pneumoniae INV200]
gi|302598603|gb|EFL65643.1| GTP-binding protein Era [Streptococcus pneumoniae BS455]
gi|302636618|gb|EFL67109.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS292]
gi|302639086|gb|EFL69546.1| GTP-binding protein Era [Streptococcus pneumoniae SP-BS293]
gi|302641316|gb|EFL71684.1| GTP-binding protein Era [Streptococcus pneumoniae BS458]
gi|302643134|gb|EFL73421.1| GTP-binding protein Era [Streptococcus pneumoniae BS457]
gi|302645804|gb|EFL76033.1| GTP-binding protein Era [Streptococcus pneumoniae BS397]
gi|306409163|gb|ADM84590.1| GTPase [Streptococcus pneumoniae AP200]
gi|327389247|gb|EGE87592.1| GTP-binding protein Era [Streptococcus pneumoniae GA04375]
gi|332073302|gb|EGI83781.1| GTP-binding protein Era [Streptococcus pneumoniae GA17570]
gi|332076243|gb|EGI86709.1| GTP-binding protein Era [Streptococcus pneumoniae GA41301]
gi|332201435|gb|EGJ15505.1| GTP-binding protein Era [Streptococcus pneumoniae GA47368]
gi|332202824|gb|EGJ16893.1| GTP-binding protein Era [Streptococcus pneumoniae GA41317]
gi|353747653|gb|EHD28309.1| GTP-binding protein Era [Streptococcus pneumoniae 4027-06]
gi|353749864|gb|EHD30507.1| GTP-binding protein Era [Streptococcus pneumoniae GA47502]
gi|353750600|gb|EHD31238.1| GTP-binding protein Era [Streptococcus pneumoniae GA11184]
gi|353752966|gb|EHD33590.1| GTP-binding protein Era [Streptococcus pneumoniae 6735-05]
gi|353756807|gb|EHD37406.1| GTP-binding protein Era [Streptococcus pneumoniae GA44288]
gi|353758730|gb|EHD39318.1| GTP-binding protein Era [Streptococcus pneumoniae GA47281]
gi|353762051|gb|EHD42614.1| GTP-binding protein Era [Streptococcus pneumoniae GA43265]
gi|353763813|gb|EHD44363.1| GTP-binding protein Era [Streptococcus pneumoniae GA44452]
gi|353765673|gb|EHD46215.1| GTP-binding protein Era [Streptococcus pneumoniae GA49138]
gi|353769702|gb|EHD50218.1| GTP-binding protein Era [Streptococcus pneumoniae 6901-05]
gi|353772732|gb|EHD53237.1| GTP-binding protein Era [Streptococcus pneumoniae 7286-06]
gi|353778101|gb|EHD58571.1| GTP-binding protein Era [Streptococcus pneumoniae GA44500]
gi|353779545|gb|EHD60009.1| GTP-binding protein Era [Streptococcus pneumoniae GA41410]
gi|353782847|gb|EHD63277.1| GTP-binding protein Era [Streptococcus pneumoniae GA49447]
gi|353787210|gb|EHD67617.1| GTP-binding protein Era [Streptococcus pneumoniae 5787-06]
gi|353789685|gb|EHD70077.1| GTP-binding protein Era [Streptococcus pneumoniae 6963-05]
gi|353790692|gb|EHD71073.1| GTP-binding protein Era [Streptococcus pneumoniae GA18523]
gi|353793865|gb|EHD74224.1| GTP-binding protein Era [Streptococcus pneumoniae GA44194]
gi|353797561|gb|EHD77894.1| GTP-binding protein Era [Streptococcus pneumoniae GA44511]
gi|353803424|gb|EHD83716.1| GTP-binding protein Era [Streptococcus pneumoniae GA07643]
gi|353805807|gb|EHD86081.1| GTP-binding protein Era [Streptococcus pneumoniae GA13455]
gi|353809522|gb|EHD89782.1| GTP-binding protein Era [Streptococcus pneumoniae GA13494]
gi|353813070|gb|EHD93303.1| GTP-binding protein Era [Streptococcus pneumoniae GA13856]
gi|353814987|gb|EHD95209.1| GTP-binding protein Era [Streptococcus pneumoniae GA13637]
gi|353815942|gb|EHD96154.1| GTP-binding protein Era [Streptococcus pneumoniae GA14798]
gi|353819345|gb|EHD99543.1| GTP-binding protein Era [Streptococcus pneumoniae GA16121]
gi|353821371|gb|EHE01547.1| GTP-binding protein Era [Streptococcus pneumoniae GA17227]
gi|353824012|gb|EHE04186.1| GTP-binding protein Era [Streptococcus pneumoniae GA16833]
gi|353828403|gb|EHE08543.1| GTP-binding protein Era [Streptococcus pneumoniae GA17328]
gi|353829690|gb|EHE09821.1| GTP-binding protein Era [Streptococcus pneumoniae GA17371]
gi|353830192|gb|EHE10322.1| GTP-binding protein Era [Streptococcus pneumoniae GA17971]
gi|353834913|gb|EHE15009.1| GTP-binding protein Era [Streptococcus pneumoniae GA19077]
gi|353835172|gb|EHE15266.1| GTP-binding protein Era [Streptococcus pneumoniae GA19451]
gi|353840040|gb|EHE20114.1| GTP-binding protein Era [Streptococcus pneumoniae GA41277]
gi|353842354|gb|EHE22401.1| GTP-binding protein Era [Streptococcus pneumoniae GA41437]
gi|353846038|gb|EHE26076.1| GTP-binding protein Era [Streptococcus pneumoniae GA41688]
gi|353850836|gb|EHE30840.1| GTP-binding protein Era [Streptococcus pneumoniae GA43380]
gi|353852804|gb|EHE32790.1| GTP-binding protein Era [Streptococcus pneumoniae GA47360]
gi|353856347|gb|EHE36316.1| GTP-binding protein Era [Streptococcus pneumoniae GA47373]
gi|353857417|gb|EHE37380.1| GTP-binding protein Era [Streptococcus pneumoniae GA47388]
gi|353859579|gb|EHE39529.1| GTP-binding protein Era [Streptococcus pneumoniae GA47439]
gi|353861452|gb|EHE41389.1| GTP-binding protein Era [Streptococcus pneumoniae GA47688]
gi|353863949|gb|EHE43868.1| GTP-binding protein Era [Streptococcus pneumoniae GA47778]
gi|353865161|gb|EHE45070.1| GTP-binding protein Era [Streptococcus pneumoniae GA47976]
gi|353871426|gb|EHE51297.1| GTP-binding protein Era [Streptococcus pneumoniae GA54644]
gi|353873471|gb|EHE53332.1| GTP-binding protein Era [Streptococcus pneumoniae
Netherlands15B-37]
gi|353875369|gb|EHE55221.1| GTP-binding protein Era [Streptococcus pneumoniae NP127]
gi|353875945|gb|EHE55795.1| GTP-binding protein Era [Streptococcus pneumoniae GA47751]
gi|353878297|gb|EHE58127.1| GTP-binding protein Era [Streptococcus pneumoniae 5185-06]
gi|353883151|gb|EHE62960.1| GTP-binding protein Era [Streptococcus pneumoniae 3063-00]
gi|353886765|gb|EHE66545.1| GTP-binding protein Era [Streptococcus pneumoniae GA07228]
gi|353888412|gb|EHE68186.1| GTP-binding protein Era [Streptococcus pneumoniae GA08780]
gi|353889620|gb|EHE69390.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP01]
gi|353892709|gb|EHE72457.1| GTP-binding protein Era [Streptococcus pneumoniae GA19690]
gi|353894295|gb|EHE74037.1| GTP-binding protein Era [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353902267|gb|EHE77797.1| GTP-binding protein Era [Streptococcus pneumoniae GA11426]
gi|353905561|gb|EHE80984.1| GTP-binding protein Era [Streptococcus pneumoniae GA13338]
gi|379138101|gb|AFC94892.1| GTP-binding protein Era [Streptococcus pneumoniae ST556]
gi|379532349|gb|EHY97578.1| GTP-binding protein Era [Streptococcus pneumoniae GA02254]
gi|379532839|gb|EHY98063.1| GTP-binding protein Era [Streptococcus pneumoniae GA02270]
gi|379532976|gb|EHY98199.1| GTP-binding protein Era [Streptococcus pneumoniae GA02714]
gi|379538072|gb|EHZ03253.1| GTP-binding protein Era [Streptococcus pneumoniae GA13499]
gi|379539404|gb|EHZ04583.1| GTP-binding protein Era [Streptococcus pneumoniae GA04175]
gi|379539912|gb|EHZ05089.1| GTP-binding protein Era [Streptococcus pneumoniae GA05245]
gi|379545640|gb|EHZ10779.1| GTP-binding protein Era [Streptococcus pneumoniae GA07914]
gi|379551075|gb|EHZ16170.1| GTP-binding protein Era [Streptococcus pneumoniae GA11856]
gi|379554422|gb|EHZ19502.1| GTP-binding protein Era [Streptococcus pneumoniae GA13224]
gi|379558032|gb|EHZ23069.1| GTP-binding protein Era [Streptococcus pneumoniae GA13723]
gi|379559191|gb|EHZ24221.1| GTP-binding protein Era [Streptococcus pneumoniae GA14373]
gi|379565170|gb|EHZ30163.1| GTP-binding protein Era [Streptococcus pneumoniae GA17457]
gi|379565793|gb|EHZ30784.1| GTP-binding protein Era [Streptococcus pneumoniae GA17719]
gi|379567015|gb|EHZ32002.1| GTP-binding protein Era [Streptococcus pneumoniae GA18068]
gi|379572509|gb|EHZ37466.1| GTP-binding protein Era [Streptococcus pneumoniae GA19923]
gi|379576572|gb|EHZ41496.1| GTP-binding protein Era [Streptococcus pneumoniae GA40183]
gi|379579955|gb|EHZ44851.1| GTP-binding protein Era [Streptococcus pneumoniae GA40410]
gi|379580867|gb|EHZ45756.1| GTP-binding protein Era [Streptococcus pneumoniae GA40563]
gi|379583676|gb|EHZ48553.1| GTP-binding protein Era [Streptococcus pneumoniae GA43257]
gi|379587940|gb|EHZ52787.1| GTP-binding protein Era [Streptococcus pneumoniae GA44386]
gi|379588222|gb|EHZ53067.1| GTP-binding protein Era [Streptococcus pneumoniae GA43264]
gi|379594464|gb|EHZ59274.1| GTP-binding protein Era [Streptococcus pneumoniae GA47179]
gi|379601146|gb|EHZ65922.1| GTP-binding protein Era [Streptococcus pneumoniae GA47522]
gi|379602057|gb|EHZ66829.1| GTP-binding protein Era [Streptococcus pneumoniae GA47628]
gi|379606365|gb|EHZ71113.1| GTP-binding protein Era [Streptococcus pneumoniae GA47794]
gi|379606459|gb|EHZ71206.1| GTP-binding protein Era [Streptococcus pneumoniae GA47760]
gi|379607817|gb|EHZ72563.1| GTP-binding protein Era [Streptococcus pneumoniae GA49194]
gi|379611758|gb|EHZ76480.1| GTP-binding protein Era [Streptococcus pneumoniae GA49542]
gi|379614500|gb|EHZ79210.1| GTP-binding protein Era [Streptococcus pneumoniae 7879-04]
gi|379615968|gb|EHZ80669.1| GTP-binding protein Era [Streptococcus pneumoniae 8190-05]
gi|379618817|gb|EHZ83492.1| GTP-binding protein Era [Streptococcus pneumoniae 5652-06]
gi|379620321|gb|EHZ84980.1| GTP-binding protein Era [Streptococcus pneumoniae 7533-05]
gi|379623011|gb|EHZ87645.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP02]
gi|379623665|gb|EHZ88298.1| GTP-binding protein Era [Streptococcus pneumoniae 4075-00]
gi|379627052|gb|EHZ91668.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP03]
gi|379630734|gb|EHZ95315.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP05]
gi|379637619|gb|EIA02172.1| GTP-binding protein Era [Streptococcus pneumoniae England14-9]
gi|379641738|gb|EIA06273.1| GTP-binding protein Era [Streptococcus pneumoniae GA08825]
gi|395573796|gb|EJG34383.1| GTP-binding protein Era [Streptococcus pneumoniae 2070035]
gi|395584982|gb|EJG45374.1| GTP-binding protein Era [Streptococcus pneumoniae 2070335]
gi|395588396|gb|EJG48726.1| GTP-binding protein Era [Streptococcus pneumoniae 2070425]
gi|395588614|gb|EJG48942.1| GTP-binding protein Era [Streptococcus pneumoniae 2070531]
gi|395595960|gb|EJG56184.1| GTP-binding protein Era [Streptococcus pneumoniae 2072047]
gi|395596232|gb|EJG56454.1| GTP-binding protein Era [Streptococcus pneumoniae 2080076]
gi|395602081|gb|EJG62225.1| GTP-binding protein Era [Streptococcus pneumoniae 2071247]
gi|395609108|gb|EJG69198.1| GTP-binding protein Era [Streptococcus pneumoniae 2080913]
gi|395609290|gb|EJG69377.1| GTP-binding protein Era [Streptococcus pneumoniae 2081685]
gi|395609616|gb|EJG69702.1| GTP-binding protein Era [Streptococcus pneumoniae 2081074]
gi|395614866|gb|EJG74884.1| GTP-binding protein Era [Streptococcus pneumoniae 2082170]
gi|395868365|gb|EJG79483.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR48]
gi|395868730|gb|EJG79847.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR27]
gi|395871089|gb|EJG82200.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR95]
gi|395875595|gb|EJG86676.1| GTP-binding protein Era [Streptococcus pneumoniae GA52612]
gi|395875732|gb|EJG86810.1| GTP-binding protein Era [Streptococcus pneumoniae SPAR55]
gi|395880178|gb|EJG91231.1| GTP-binding protein Era [Streptococcus pneumoniae GA17301]
gi|395882118|gb|EJG93165.1| GTP-binding protein Era [Streptococcus pneumoniae GA04672]
gi|395888297|gb|EJG99309.1| GTP-binding protein Era [Streptococcus pneumoniae GA58771]
gi|395894679|gb|EJH05659.1| GTP-binding protein Era [Streptococcus pneumoniae GA56113]
gi|395897250|gb|EJH08214.1| GTP-binding protein Era [Streptococcus pneumoniae GA58581]
gi|395898397|gb|EJH09341.1| GTP-binding protein Era [Streptococcus pneumoniae GA19998]
gi|395907851|gb|EJH18736.1| GTP-binding protein Era [Streptococcus pneumoniae GA60132]
gi|395910828|gb|EJH21697.1| GTP-binding protein Era [Streptococcus pneumoniae GA62681]
gi|395912289|gb|EJH23152.1| GTP-binding protein Era [Streptococcus pneumoniae GA58981]
gi|395914636|gb|EJH25480.1| GTP-binding protein Era [Streptococcus pneumoniae GA47562]
gi|404277981|emb|CCM08552.1| GTP-binding protein Era [Streptococcus pneumoniae SPNA45]
gi|406369355|gb|AFS43045.1| GTP-binding protein Era [Streptococcus pneumoniae gamPNI0373]
gi|429319324|emb|CCP32579.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN034183]
gi|429321140|emb|CCP34553.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN994039]
gi|429322960|emb|CCP30594.1| GTP-binding protein Era homolog [Streptococcus pneumoniae
SPN994038]
gi|444249476|gb|ELU55966.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS125219]
gi|444255870|gb|ELU62210.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0002]
gi|444256361|gb|ELU62699.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS70012]
gi|444260085|gb|ELU66393.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0006]
gi|444261036|gb|ELU67343.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS81218]
gi|444266107|gb|ELU72079.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0007]
gi|444267390|gb|ELU73295.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0008]
gi|444269471|gb|ELU75278.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0010]
gi|444274913|gb|ELU80553.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0009]
gi|444275573|gb|ELU81195.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0153]
gi|444278546|gb|ELU83988.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0199]
gi|444279490|gb|ELU84886.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0076]
gi|444281043|gb|ELU86379.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0360]
gi|444282944|gb|ELU88166.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0427]
gi|444288292|gb|ELU93189.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PNI0446]
Length = 299
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|402302484|ref|ZP_10821595.1| GTP-binding protein Era [Selenomonas sp. FOBRC9]
gi|400380302|gb|EJP33121.1| GTP-binding protein Era [Selenomonas sp. FOBRC9]
Length = 298
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 151/260 (58%), Gaps = 18/260 (6%)
Query: 112 NH-KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
NH KSG+ AV+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DT
Sbjct: 2 NHYKSGFAAVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------- 223
PG+ + K H L S M K A + V+V A E++ G G+
Sbjct: 62 PGVHKPK-HKLGSHMAKATEGA---LHGVDVVVFVVDATEKM------GAGEQYILKQLE 111
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K ++P+LL +NK DL++ E + Y K D ++P+SA+ G + + D I LP
Sbjct: 112 KVRVPVLLAVNKIDLLRREETLPIIASYAKTYDFAGIVPISARAGENLAGLLDEIKKHLP 171
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YYP+D+V++ PER + E++REK R+E+P+A V++ TR +++
Sbjct: 172 EGPRYYPEDMVTDQPERLIIAELVREKALELTRDEIPHAVAVDIEEITTRAKGDVYVRAV 231
Query: 344 IVVEKNSQKIILIGKVSPFL 363
I VE+ SQK I+IG L
Sbjct: 232 IYVERESQKGIVIGARGALL 251
>gi|383810860|ref|ZP_09966344.1| GTP-binding protein Era [Prevotella sp. oral taxon 306 str. F0472]
gi|383356499|gb|EID33999.1| GTP-binding protein Era [Prevotella sp. oral taxon 306 str. F0472]
Length = 293
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADILLYVTDVVEDPEKNMDFLEKV---SKMAIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D ++ + + K E++P+SAK G + + I LP PA++ KD
Sbjct: 118 INKIDESDQKKLGDLVGRWHKLLPNAEILPISAKNKFGTDILMKRIHELLPDSPAFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI Y EVPY+ +V V +K + I I VE++SQK
Sbjct: 178 QLTDKPARFFVSEIIREKILRYYDKEVPYSVEVVVERFK-EDDRQIHINAIIYVERSSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|258541745|ref|YP_003187178.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01]
gi|384041666|ref|YP_005480410.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-12]
gi|384050181|ref|YP_005477244.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-03]
gi|384053291|ref|YP_005486385.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-07]
gi|384056523|ref|YP_005489190.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-22]
gi|384059164|ref|YP_005498292.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-26]
gi|384062458|ref|YP_005483100.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-32]
gi|384118534|ref|YP_005501158.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632823|dbj|BAH98798.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01]
gi|256635880|dbj|BAI01849.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-03]
gi|256638935|dbj|BAI04897.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-07]
gi|256641989|dbj|BAI07944.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-22]
gi|256645044|dbj|BAI10992.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-26]
gi|256648099|dbj|BAI14040.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-32]
gi|256651152|dbj|BAI17086.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654143|dbj|BAI20070.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-12]
Length = 300
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 136/244 (55%), Gaps = 3/244 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+ A++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q++L DTPGI
Sbjct: 7 RCGFAALVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGHSQILLVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ LD M+ + +AD ++LVDA + + E + + K K + LVL
Sbjct: 67 FRPR-RKLDRAMVAAAWTGAEDADITLLLVDARSGLTEAVQTIIERLAETKRK--VWLVL 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ + + V+ V VSA+ G+GVED+ D + LP GP YP+D
Sbjct: 124 NKTDLVPATALLPLTASITEKLPVEHVFMVSARTGNGVEDLLDKLAASLPEGPYLYPEDD 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R E++RE+IFMQ EVPY+ V SYK RP I I V + K
Sbjct: 184 LTDLPDRLLAAELVREQIFMQTHEEVPYSATVETESYKERPDGSVRIDATIYVSRAGHKA 243
Query: 354 ILIG 357
ILIG
Sbjct: 244 ILIG 247
>gi|225854473|ref|YP_002735985.1| GTP-binding protein Era [Streptococcus pneumoniae JJA]
gi|418086704|ref|ZP_12723874.1| GTP-binding protein Era [Streptococcus pneumoniae GA47033]
gi|418202243|ref|ZP_12838673.1| GTP-binding protein Era [Streptococcus pneumoniae GA52306]
gi|419455368|ref|ZP_13995328.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP04]
gi|421236115|ref|ZP_15692716.1| GTP-binding protein Era [Streptococcus pneumoniae 2071004]
gi|421284927|ref|ZP_15735704.1| GTP-binding protein Era [Streptococcus pneumoniae GA60190]
gi|254783668|sp|C1CDW4.1|ERA_STRZJ RecName: Full=GTPase Era
gi|225722974|gb|ACO18827.1| GTP-binding protein Era [Streptococcus pneumoniae JJA]
gi|353758965|gb|EHD39551.1| GTP-binding protein Era [Streptococcus pneumoniae GA47033]
gi|353868046|gb|EHE47936.1| GTP-binding protein Era [Streptococcus pneumoniae GA52306]
gi|379629825|gb|EHZ94419.1| GTP-binding protein Era [Streptococcus pneumoniae EU-NP04]
gi|395605034|gb|EJG65166.1| GTP-binding protein Era [Streptococcus pneumoniae 2071004]
gi|395886906|gb|EJG97921.1| GTP-binding protein Era [Streptococcus pneumoniae GA60190]
Length = 299
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLGEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|304438431|ref|ZP_07398371.1| GTP-binding protein Era [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368514|gb|EFM22199.1| GTP-binding protein Era [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 298
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 146/255 (57%), Gaps = 9/255 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HKSG+VAV+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTP
Sbjct: 3 THKSGFVAVVGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTEKDAQIIFLDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSA---GINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
GI K L S M K A +V + + A ER IL + H P
Sbjct: 63 GI-HKPQDALGSYMAKATEGALRGVDVVVFVVDVTEKMGAGERY--ILVQLAQVHA---P 116
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LL +NK D I E + Y K D ++P+SA+ + + D I KLP GP Y
Sbjct: 117 VLLAVNKIDRIPREESLPVIASYAKAYDFAAIVPISAREEENLTGLVDEIKEKLPEGPQY 176
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP+D+V++ PER + E++REK+ R+EVP+A V++ TRP +I+ I VE+
Sbjct: 177 YPEDMVTDQPERLIIAELVREKVLELTRDEVPHAVAVDIEEMTTRPKGDVYIRAVIYVER 236
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IG L
Sbjct: 237 RSQKGIIIGTRGALL 251
>gi|444376450|ref|ZP_21175694.1| GTP-binding protein Era [Enterovibrio sp. AK16]
gi|443679428|gb|ELT86084.1| GTP-binding protein Era [Enterovibrio sp. AK16]
Length = 304
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 153/252 (60%), Gaps = 5/252 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+H H G++A++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ +
Sbjct: 4 THETHHCGFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVYV 63
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+ ++ ++ +M + S+ + + ++ LVD + + + +L + K +LP
Sbjct: 64 DTPGLHIEEKRTINRLMNRAASSSLTDVELVLFLVDGTQWTQDDEMVLNKL---KKAELP 120
Query: 229 ILLVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
+L++NK D +K GE+ L+ + D +V+PVSAK+G ++ + + LP G
Sbjct: 121 TVLLINKVDNVKEKGELFPHLQEVSEKMDFIDVVPVSAKHGTNIDVVEKLVRNHLPEGEW 180
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVV 346
Y+P++ V++ +RF EIIREK+ +E+PY+ V + + P F I I+V
Sbjct: 181 YFPEEYVTDRSQRFMASEIIREKLMRFTGDELPYSVTVEIERFDYNPDTDGFEINGLILV 240
Query: 347 EKNSQKIILIGK 358
E+N QK ++IGK
Sbjct: 241 ERNGQKRMVIGK 252
>gi|385261366|ref|ZP_10039491.1| GTP-binding protein Era [Streptococcus sp. SK140]
gi|385188368|gb|EIF35854.1| GTP-binding protein Era [Streptococcus sp. SK140]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEDTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|428769032|ref|YP_007160822.1| GTP-binding protein Era-like-protein [Cyanobacterium aponinum PCC
10605]
gi|428683311|gb|AFZ52778.1| GTP-binding protein Era-like-protein [Cyanobacterium aponinum PCC
10605]
Length = 313
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 159/254 (62%), Gaps = 16/254 (6%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P+ KSG++A++G+PNVGKSTL N+++GQK++I + QTTR+R+ GI + P Q+I DT
Sbjct: 17 PDFKSGFIAIIGRPNVGKSTLMNELVGQKVAITSPVAQTTRNRLRGILTTPSAQIIFVDT 76
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PG I K H L ++++N SA N D ++ +VDA + D + + + K K P++
Sbjct: 77 PG-IHKPHHELGKVLVQNAVSAINNVDLVLFVVDASQPAGGGDRYITDLL--LKSKTPVI 133
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVD----EVIPVSAKYGHGVEDIRDWILTKLPLGP 286
L LNK DL + +KK E + ++ ++I SA G G++ ++ ++ KL +GP
Sbjct: 134 LGLNKSDL----QGSKKESLNESYQEICQENWQMINFSAITGEGLDKLQQELINKLDVGP 189
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV--VSYKTRPTAKDFIQVEI 344
YYP D+V++ PERF +GE+IRE+I + R E+P++ V V V +T+ T I I
Sbjct: 190 YYYPPDLVTDQPERFIIGELIREQILLHTREEIPHSVAVTVEKVVEETKITK---IYAAI 246
Query: 345 VVEKNSQKIILIGK 358
VE++SQK I+IG+
Sbjct: 247 SVERSSQKGIIIGQ 260
>gi|149006354|ref|ZP_01830066.1| GTP-binding protein Era [Streptococcus pneumoniae SP18-BS74]
gi|169834294|ref|YP_001694414.1| GTP-binding protein Era [Streptococcus pneumoniae Hungary19A-6]
gi|221231732|ref|YP_002510884.1| GTP-binding protein Era homolog [Streptococcus pneumoniae ATCC
700669]
gi|307127480|ref|YP_003879511.1| GTP-binding protein Era [Streptococcus pneumoniae 670-6B]
gi|307704699|ref|ZP_07641598.1| GTP-binding protein Era [Streptococcus mitis SK597]
gi|307706467|ref|ZP_07643276.1| GTP-binding protein Era [Streptococcus mitis SK321]
gi|322376464|ref|ZP_08050957.1| GTP-binding protein Era [Streptococcus sp. M334]
gi|415698176|ref|ZP_11457087.1| GTP-binding protein Era [Streptococcus pneumoniae 459-5]
gi|415749371|ref|ZP_11477315.1| GTP-binding protein Era [Streptococcus pneumoniae SV35]
gi|415752055|ref|ZP_11479166.1| GTP-binding protein Era [Streptococcus pneumoniae SV36]
gi|417676725|ref|ZP_12326136.1| GTP-binding protein Era [Streptococcus pneumoniae GA17545]
gi|417923311|ref|ZP_12566780.1| GTP-binding protein Era [Streptococcus mitis SK569]
gi|418096083|ref|ZP_12733198.1| GTP-binding protein Era [Streptococcus pneumoniae GA16531]
gi|418112324|ref|ZP_12749326.1| GTP-binding protein Era [Streptococcus pneumoniae GA41538]
gi|418123243|ref|ZP_12760177.1| GTP-binding protein Era [Streptococcus pneumoniae GA44378]
gi|418127829|ref|ZP_12764725.1| GTP-binding protein Era [Streptococcus pneumoniae NP170]
gi|418132811|ref|ZP_12769684.1| GTP-binding protein Era [Streptococcus pneumoniae GA11304]
gi|418137004|ref|ZP_12773846.1| GTP-binding protein Era [Streptococcus pneumoniae GA11663]
gi|418155006|ref|ZP_12791737.1| GTP-binding protein Era [Streptococcus pneumoniae GA16242]
gi|418178001|ref|ZP_12814585.1| GTP-binding protein Era [Streptococcus pneumoniae GA41565]
gi|418225394|ref|ZP_12852023.1| GTP-binding protein Era [Streptococcus pneumoniae NP112]
gi|418977671|ref|ZP_13525485.1| GTP-binding protein Era [Streptococcus mitis SK575]
gi|419466412|ref|ZP_14006295.1| GTP-binding protein Era [Streptococcus pneumoniae GA05248]
gi|419473034|ref|ZP_14012885.1| GTP-binding protein Era [Streptococcus pneumoniae GA13430]
gi|419493105|ref|ZP_14032832.1| GTP-binding protein Era [Streptococcus pneumoniae GA47210]
gi|419495286|ref|ZP_14035004.1| GTP-binding protein Era [Streptococcus pneumoniae GA47461]
gi|419512365|ref|ZP_14051999.1| GTP-binding protein Era [Streptococcus pneumoniae GA05578]
gi|419516645|ref|ZP_14056263.1| GTP-binding protein Era [Streptococcus pneumoniae GA02506]
gi|419767482|ref|ZP_14293635.1| GTP-binding protein Era [Streptococcus mitis SK579]
gi|421233957|ref|ZP_15690579.1| GTP-binding protein Era [Streptococcus pneumoniae 2061617]
gi|421249264|ref|ZP_15705726.1| GTP-binding protein Era [Streptococcus pneumoniae 2082239]
gi|421283159|ref|ZP_15733946.1| GTP-binding protein Era [Streptococcus pneumoniae GA04216]
gi|421289600|ref|ZP_15740351.1| GTP-binding protein Era [Streptococcus pneumoniae GA54354]
gi|421298436|ref|ZP_15749124.1| GTP-binding protein Era [Streptococcus pneumoniae GA60080]
gi|421303187|ref|ZP_15753851.1| GTP-binding protein Era [Streptococcus pneumoniae GA17484]
gi|421304919|ref|ZP_15755575.1| GTP-binding protein Era [Streptococcus pneumoniae GA62331]
gi|226741241|sp|B1IBC9.1|ERA_STRPI RecName: Full=GTPase Era
gi|254783666|sp|B8ZP66.1|ERA_STRPJ RecName: Full=GTPase Era
gi|147762131|gb|EDK69093.1| GTP-binding protein Era [Streptococcus pneumoniae SP18-BS74]
gi|168996796|gb|ACA37408.1| GTP-binding protein Era [Streptococcus pneumoniae Hungary19A-6]
gi|220674192|emb|CAR68720.1| GTP-binding protein Era homolog [Streptococcus pneumoniae ATCC
700669]
gi|306484542|gb|ADM91411.1| GTP-binding protein Era [Streptococcus pneumoniae 670-6B]
gi|307618177|gb|EFN97335.1| GTP-binding protein Era [Streptococcus mitis SK321]
gi|307621746|gb|EFO00784.1| GTP-binding protein Era [Streptococcus mitis SK597]
gi|321282271|gb|EFX59278.1| GTP-binding protein Era [Streptococcus sp. M334]
gi|332075585|gb|EGI86053.1| GTP-binding protein Era [Streptococcus pneumoniae GA17545]
gi|342837115|gb|EGU71314.1| GTP-binding protein Era [Streptococcus mitis SK569]
gi|353771070|gb|EHD51581.1| GTP-binding protein Era [Streptococcus pneumoniae GA16531]
gi|353784190|gb|EHD64611.1| GTP-binding protein Era [Streptococcus pneumoniae GA41538]
gi|353797330|gb|EHD77665.1| GTP-binding protein Era [Streptococcus pneumoniae GA44378]
gi|353800290|gb|EHD80604.1| GTP-binding protein Era [Streptococcus pneumoniae NP170]
gi|353806767|gb|EHD87040.1| GTP-binding protein Era [Streptococcus pneumoniae GA11304]
gi|353823298|gb|EHE03473.1| GTP-binding protein Era [Streptococcus pneumoniae GA16242]
gi|353844775|gb|EHE24818.1| GTP-binding protein Era [Streptococcus pneumoniae GA41565]
gi|353882702|gb|EHE62513.1| GTP-binding protein Era [Streptococcus pneumoniae NP112]
gi|353901631|gb|EHE77163.1| GTP-binding protein Era [Streptococcus pneumoniae GA11663]
gi|379544535|gb|EHZ09679.1| GTP-binding protein Era [Streptococcus pneumoniae GA05248]
gi|379552541|gb|EHZ17630.1| GTP-binding protein Era [Streptococcus pneumoniae GA13430]
gi|379595143|gb|EHZ59952.1| GTP-binding protein Era [Streptococcus pneumoniae GA47210]
gi|379595368|gb|EHZ60176.1| GTP-binding protein Era [Streptococcus pneumoniae GA47461]
gi|379636835|gb|EIA01393.1| GTP-binding protein Era [Streptococcus pneumoniae GA05578]
gi|379640648|gb|EIA05187.1| GTP-binding protein Era [Streptococcus pneumoniae GA02506]
gi|381309751|gb|EIC50584.1| GTP-binding protein Era [Streptococcus pneumoniae SV36]
gi|381317181|gb|EIC57911.1| GTP-binding protein Era [Streptococcus pneumoniae 459-5]
gi|381317665|gb|EIC58390.1| GTP-binding protein Era [Streptococcus pneumoniae SV35]
gi|383349639|gb|EID27568.1| GTP-binding protein Era [Streptococcus mitis SK575]
gi|383353025|gb|EID30652.1| GTP-binding protein Era [Streptococcus mitis SK579]
gi|395602854|gb|EJG62996.1| GTP-binding protein Era [Streptococcus pneumoniae 2061617]
gi|395614565|gb|EJG74584.1| GTP-binding protein Era [Streptococcus pneumoniae 2082239]
gi|395881122|gb|EJG92171.1| GTP-binding protein Era [Streptococcus pneumoniae GA04216]
gi|395888841|gb|EJG99851.1| GTP-binding protein Era [Streptococcus pneumoniae GA54354]
gi|395901809|gb|EJH12745.1| GTP-binding protein Era [Streptococcus pneumoniae GA17484]
gi|395902392|gb|EJH13325.1| GTP-binding protein Era [Streptococcus pneumoniae GA60080]
gi|395905581|gb|EJH16486.1| GTP-binding protein Era [Streptococcus pneumoniae GA62331]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|381195726|ref|ZP_09903068.1| GTPase Era [Acinetobacter lwoffii WJ10621]
Length = 342
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 156/259 (60%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ +SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSRAKSQAVFVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + DE++ E + + ++P++L
Sbjct: 96 GMHKKEVRAINKMMNRAASSALRDVNLVLFVLDADKWTQN-DELVLEKLKNA--EMPVIL 152
Query: 232 VLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D+++ A L + K + E++PVSA G ++ +RD I LP P Y
Sbjct: 153 VINKIDILENKNHALPLIQERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPFQPPMYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT----------RPT-AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT RP A +
Sbjct: 213 LDQLTDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRPKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|373465538|ref|ZP_09556996.1| ribosome biogenesis GTPase Era [Lactobacillus kisonensis F0435]
gi|371760197|gb|EHO48893.1| ribosome biogenesis GTPase Era [Lactobacillus kisonensis F0435]
Length = 298
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 155/256 (60%), Gaps = 18/256 (7%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
+PN+ SG+VA++G+PNVGKST N+++GQK++I+++K QTTR++I G+ + E Q++ D
Sbjct: 3 NPNYHSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTKEAQIVFID 62
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------ 223
TPGI + K + D MM++ SA D ++ +V+A + G GD+
Sbjct: 63 TPGIHKPKDKLGD-FMMESALSALKEVDAVLFMVNATE---------RRGAGDNFIIDQL 112
Query: 224 -KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 282
K PI L++NK D I P +I ++ Y+ +V P+SA G+ V ++ + ++ +L
Sbjct: 113 KKVDQPIYLLINKIDEISPDDIMAIIDQYKSALKFKDVYPISALQGNNVPELIEALVKEL 172
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP YYP+D V++HPERF + E+IREK+ R E+P + V + K IQ
Sbjct: 173 PEGPQYYPEDQVTDHPERFVISELIREKVMQLTRQEIPTSTAVYIEKIKNDDGLLR-IQA 231
Query: 343 EIVVEKNSQKIILIGK 358
I+VE++ QK I+IGK
Sbjct: 232 TIIVERDGQKGIVIGK 247
>gi|365924952|ref|ZP_09447715.1| GTPase Era [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420266356|ref|ZP_14768832.1| Like GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394425640|gb|EJE98582.1| Like GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 300
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 148/249 (59%), Gaps = 3/249 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++A++G+PNVGKST NQ+IG+K++I+++K QTTR++I GI + + Q++ DTPGI
Sbjct: 7 SGFIAIIGRPNVGKSTFLNQVIGEKIAIMSDKAQTTRNKIQGIYTTDDTQIVFIDTPGI- 65
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L M+++ S D +V +V+A + R DE + + + + K PI LV+N
Sbjct: 66 HKPHSRLGDFMVESALSTLNEVDAVVFMVNATEKKGRGDEFIIKRL--KQVKQPIFLVIN 123
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D I P + ++ Y K D EV P+SA G ++ I LP GP +YP D V
Sbjct: 124 KIDKIHPDALLGIVDSYRKDLDFAEVYPISALQGINCPELVSAISNVLPEGPQFYPDDQV 183
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
++HPERF GE+IRE++ EVP++ V V + K +Q I+VE++SQK I
Sbjct: 184 TDHPERFIAGELIREQVLDLTHEEVPHSVAVIVERIRRENEEKVLVQATIIVERSSQKGI 243
Query: 355 LIGKVSPFL 363
LIGK L
Sbjct: 244 LIGKGGKML 252
>gi|319946540|ref|ZP_08020775.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
gi|417920629|ref|ZP_12564130.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
gi|319747286|gb|EFV99544.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
gi|342828422|gb|EGU62795.1| GTP-binding protein Era [Streptococcus australis ATCC 700641]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|297181617|gb|ADI17801.1| GTPase [uncultured Sphingobacteriales bacterium HF0130_33B19]
Length = 292
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 157/256 (61%), Gaps = 25/256 (9%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+HK+GYV ++G PNVGKSTL N +IG KLSI+T K QTTRHRILGI + ++Q++ DTP
Sbjct: 2 DHKAGYVNIIGNPNVGKSTLMNALIGHKLSIITPKAQTTRHRILGILNEKDFQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--DKL-- 227
G+I+ + L MM V SA +AD ++ ++ EI E+G+ D K +KL
Sbjct: 62 GVIDPS-YKLQENMMNFVYSALHDADVLIYMI----------EIGEKGLKDAKLFEKLKT 110
Query: 228 ---PILLVLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
P+L++LNK DL +++++E W K + D ++P+SA ++ I+ ++ LP
Sbjct: 111 TDVPVLMLLNKIDLADQDFVSQQMEIWNSKLPNAD-LLPISALNNFNLDVIKKKLVDMLP 169
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
L P Y+ K+ +++ ERFF EIIREKI Y+ E+PY+ Q+ V + KD +++
Sbjct: 170 LSPPYFDKESITDKSERFFTEEIIREKILKHYKKEIPYSVQIQVEEF---VNEKDIVKIR 226
Query: 344 --IVVEKNSQKIILIG 357
I V + +QK I+IG
Sbjct: 227 AIIYVMRETQKGIIIG 242
>gi|168187762|ref|ZP_02622397.1| GTP-binding protein Era [Clostridium botulinum C str. Eklund]
gi|169294368|gb|EDS76501.1| GTP-binding protein Era [Clostridium botulinum C str. Eklund]
Length = 294
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 146/245 (59%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKSTL N ++G+KLSIV+ +PQTTR+ I + + +YQ++ DTPGI
Sbjct: 3 KSGFISIIGRPNVGKSTLTNDILGEKLSIVSCRPQTTRNNIRAVLTRDDYQLVFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K H L M+K ++ D IV + + DE++ E + + K P+ LV+
Sbjct: 63 -HKPRHKLGEYMVKAAETSTDEVDLIVFITTPEGEISKGDELILENIKNRKK--PVFLVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +A+ L+ Y ++ D E+IP+SA+ V+ + + ++ +P GP YYP+D+
Sbjct: 120 NKIDENPQELVAETLQKYSEYMDFAEIIPISARKSKNVDTLLNLMIKYMPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EIIREK EVP+ V ++S K I ++ EK+S K
Sbjct: 180 ITDVQERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQTKRGTYHIDANLLCEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|83951644|ref|ZP_00960376.1| GTP-binding protein Era [Roseovarius nubinhibens ISM]
gi|83836650|gb|EAP75947.1| GTP-binding protein Era [Roseovarius nubinhibens ISM]
Length = 301
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
++G++A++G+PN GKSTL N+M+G K+SIVT+K QTTR RI G+ E Q++ DTPG+
Sbjct: 4 RAGFIALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVALEGEAQLVFVDTPGL 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLV 232
+ + LD M+ +AD +V+L++A + E ++ ILE G+GD P+ L
Sbjct: 64 FKPR-RRLDRAMVAAAWGGASDADVVVLLIEAHRGLTEGVERILE-GLGDVTRGRPVALA 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D +K E+ E + E +SA+ GHGV+D+R W+ +LP GP YP+D
Sbjct: 122 INKIDRVKSEELLALTEKMNTRHEFVETFMISAERGHGVDDLRKWLAEQLPEGPWLYPED 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P R EI REK+ ++ E+PY V S++ R I I V ++ K
Sbjct: 182 QIADLPMRMIAAEITREKLTLRLHQELPYQLTVETESWEERKDGTARIDQVIYVSRDGHK 241
Query: 353 IILIG 357
I++G
Sbjct: 242 GIVLG 246
>gi|358012514|ref|ZP_09144324.1| GTPase Era [Acinetobacter sp. P8-3-8]
Length = 342
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 154/259 (59%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+++SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSRAKSQAVFVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM K SA + + ++ +VDA K D +LE+ ++P++L
Sbjct: 96 GMHKKEVRAINKMMNKAAHSALRDVNLVLFVVDAQKWTPNDDLVLEKL---KNAEMPVVL 152
Query: 232 VLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D ++ + L + K + E++PVSA G ++ +R+ I LP P Y
Sbjct: 153 VINKIDTLENKRLILPLIQERAKLMNFAEIVPVSALRGANLDHLREAIEKYLPFQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT----------RPTAK-DF 339
+ +++ ERF EIIREKI Q E+PY V + S+KT RP A +
Sbjct: 213 LEQLTDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATINEKTGRPKAACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V+++ QK I+IG+
Sbjct: 273 IDATIFVDRSGQKAIVIGE 291
>gi|300726753|ref|ZP_07060183.1| GTP-binding protein Era [Prevotella bryantii B14]
gi|299775866|gb|EFI72446.1| GTP-binding protein Era [Prevotella bryantii B14]
Length = 293
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNDDDCQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D ++PE+ + L++ K +P+LLV
Sbjct: 62 VLKPNYKM-QEMMLAFSESALADADVLLYVTDVIESPEKNQDFLDKV---KKMTIPVLLV 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + E++P+SAK GV+ + I LP P Y+ KD
Sbjct: 118 INKIDESNQKLLGDIVEKWHGLLPNAEILPISAKNKFGVDMLMKRIKELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI + Y E+PY+ +V V +K + I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILLYYDKEIPYSVEVVVERFK-EDEKRIHINAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|149019560|ref|ZP_01834879.1| GTP-binding protein Era [Streptococcus pneumoniae SP23-BS72]
gi|418102689|ref|ZP_12739765.1| GTP-binding protein Era [Streptococcus pneumoniae NP070]
gi|419475362|ref|ZP_14015202.1| GTP-binding protein Era [Streptococcus pneumoniae GA14688]
gi|419486518|ref|ZP_14026284.1| GTP-binding protein Era [Streptococcus pneumoniae GA44128]
gi|421208790|ref|ZP_15665812.1| GTP-binding protein Era [Streptococcus pneumoniae 2070005]
gi|421224836|ref|ZP_15681580.1| GTP-binding protein Era [Streptococcus pneumoniae 2070768]
gi|147930935|gb|EDK81915.1| GTP-binding protein Era [Streptococcus pneumoniae SP23-BS72]
gi|353776855|gb|EHD57330.1| GTP-binding protein Era [Streptococcus pneumoniae NP070]
gi|379560907|gb|EHZ25928.1| GTP-binding protein Era [Streptococcus pneumoniae GA14688]
gi|379588133|gb|EHZ52979.1| GTP-binding protein Era [Streptococcus pneumoniae GA44128]
gi|395575746|gb|EJG36311.1| GTP-binding protein Era [Streptococcus pneumoniae 2070005]
gi|395590624|gb|EJG50928.1| GTP-binding protein Era [Streptococcus pneumoniae 2070768]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMLREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|333394977|ref|ZP_08476796.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|420144895|ref|ZP_14652374.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
gi|398403452|gb|EJN56694.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
Length = 301
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 17/244 (6%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKST N+++GQK++I++NK QTTR++I GI + Q++ DTPGI
Sbjct: 8 SGFVAIVGRPNVGKSTFLNRVVGQKVAIMSNKAQTTRNKIQGIYTTEHSQIVFIDTPGI- 66
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDKL 227
K + LD MM + SA D ++ +V A +R+ G GD K K
Sbjct: 67 HKPQNKLDEFMMNSATSALNEVDAVLFMV---SAKDRM------GAGDTFIIDQLKKVKQ 117
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P+ L++NK D + P ++A +E Y+ D +V P+SA G+ V+++ + LP GP
Sbjct: 118 PVYLIVNKIDTVHPNDLAPFVEQYQAELDFAQVFPISALQGNNVDELLATLNQNLPEGPQ 177
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP D +++HPE F V E+IREKI R+EVP++ VNV + K I+ I+VE
Sbjct: 178 YYPDDQITDHPEYFVVSELIREKILELTRDEVPHSVAVNVERMRRNDQDKLKIEATIIVE 237
Query: 348 KNSQ 351
++ Q
Sbjct: 238 RDGQ 241
>gi|256425495|ref|YP_003126148.1| GTP-binding protein Era [Chitinophaga pinensis DSM 2588]
gi|256040403|gb|ACU63947.1| GTP-binding protein Era [Chitinophaga pinensis DSM 2588]
Length = 289
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 151/248 (60%), Gaps = 12/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V + GK N GKSTL N ++G+KL+IV+ K QTTRHRI G+ + PEYQ++ DTPG
Sbjct: 2 HKAGFVNIFGKANAGKSTLMNALVGEKLAIVSPKVQTTRHRITGVVTTPEYQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV---GDHKDKLPI 229
II+ + + L MM V+SA +AD ++++D + + LEE + K K
Sbjct: 62 IIDPR-YRLHEKMMGAVKSALEDADVAMLIMD-------VKDNLEENLSLFASLKLKART 113
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+LVLNK DL+ E+ ++ E++ ++V+ +SA G GV + I+ LP +Y
Sbjct: 114 ILVLNKSDLLMKEELDVLVKKCEEWGKAEKVVLISAMQGKGVPALLQTIVGMLPESEPFY 173
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+D +++ RFFVGEI+REKIF + E+PY V V ++ + T I +I+V +
Sbjct: 174 PEDTLTDKSTRFFVGEIVREKIFQLFDEEIPYHTAVAVTQFQEKNTLIK-ISADIIVTRE 232
Query: 350 SQKIILIG 357
+QK I++G
Sbjct: 233 TQKAIILG 240
>gi|50085654|ref|YP_047164.1| GTP-binding protein Era [Acinetobacter sp. ADP1]
gi|49531630|emb|CAG69342.1| GTP-binding protein,16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ADP1]
Length = 345
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 153/259 (59%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ +SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 39 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVYVDTP 98
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VD K + D +LE+ ++P++L
Sbjct: 99 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDIHKWTQNDDLVLEKL---KNAEMPVIL 155
Query: 232 VLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D ++ + + ++ K + E+IPVSA G ++ +RD + LP P Y
Sbjct: 156 VINKVDTLEDKKSLLPLIQERTKLMNFAEIIPVSALRGANLDQLRDTVEKYLPFQPPLYS 215
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKD----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT PT + +
Sbjct: 216 LDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEPTVSEKTGRLKPACTY 275
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I VE+ QK I+IG+
Sbjct: 276 IDATIFVERAGQKAIVIGE 294
>gi|288905822|ref|YP_003431044.1| GTP-binding protein era [Streptococcus gallolyticus UCN34]
gi|306831911|ref|ZP_07465066.1| GTP-binding protein Era [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306834025|ref|ZP_07467146.1| GTP-binding protein Era [Streptococcus bovis ATCC 700338]
gi|325978857|ref|YP_004288573.1| GTP-binding protein era [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338291|ref|YP_006034460.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732548|emb|CBI14120.1| GTP-binding protein era [Streptococcus gallolyticus UCN34]
gi|304423813|gb|EFM26958.1| GTP-binding protein Era [Streptococcus bovis ATCC 700338]
gi|304425837|gb|EFM28954.1| GTP-binding protein Era [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178785|emb|CBZ48829.1| era, yqfH, sdgE, bex, rbaA GTP-binding protein era homolog
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|334280927|dbj|BAK28501.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 298
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + L M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPK-NALGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLMNILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVIVESMKRDPETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|450067481|ref|ZP_21846668.1| GTP-binding protein Era [Streptococcus mutans NLML9]
gi|449208040|gb|EMC08676.1| GTP-binding protein Era [Streptococcus mutans NLML9]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETNKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IG+ L
Sbjct: 241 GIIIGRQGAML 251
>gi|450127723|ref|ZP_21868699.1| GTP-binding protein Era [Streptococcus mutans U2A]
gi|449230343|gb|EMC29605.1| GTP-binding protein Era [Streptococcus mutans U2A]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IG+ L
Sbjct: 241 GIIIGRQGAML 251
>gi|389721527|ref|ZP_10188279.1| GTPase Era [Acinetobacter sp. HA]
gi|388608823|gb|EIM38019.1| GTPase Era [Acinetobacter sp. HA]
Length = 342
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 151/259 (58%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+++SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ +VDA K D +LE+ +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVVDADKWTPNDDLVLEKL---KNADMPVIL 152
Query: 232 VLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D ++ A L + K + E++PVSA G +E +R I LP P Y
Sbjct: 153 VINKIDTLENKNHALPLIQERAKLMNFAEIVPVSALRGANLEHLRTTIANYLPFQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPT----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT PT A +
Sbjct: 213 LDQLTDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEPTLNEKTGRMKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRAGQKAIVIGE 291
>gi|450181979|ref|ZP_21888078.1| GTP-binding protein Era [Streptococcus mutans 24]
gi|449245421|gb|EMC43758.1| GTP-binding protein Era [Streptococcus mutans 24]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSRLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETNKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IG+ L
Sbjct: 241 GIIIGRQGAML 251
>gi|342164083|ref|YP_004768722.1| GTPase Era [Streptococcus pseudopneumoniae IS7493]
gi|341933965|gb|AEL10862.1| GTPase Era [Streptococcus pseudopneumoniae IS7493]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|449966397|ref|ZP_21812343.1| GTP-binding protein Era [Streptococcus mutans 15VF2]
gi|449170161|gb|EMB72893.1| GTP-binding protein Era [Streptococcus mutans 15VF2]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ ++ A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMIPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|417092556|ref|ZP_11957172.1| GTP-binding protein Era [Streptococcus suis R61]
gi|353532235|gb|EHC01907.1| GTP-binding protein Era [Streptococcus suis R61]
Length = 299
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEGQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + D E++P+SA G+ V + + + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRQQMDFKEIVPISATQGNNVNRLMEILKENLDEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDGFTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|325299809|ref|YP_004259726.1| GTP-binding protein Era-like-protein [Bacteroides salanitronis DSM
18170]
gi|324319362|gb|ADY37253.1| GTP-binding protein Era-like-protein [Bacteroides salanitronis DSM
18170]
Length = 293
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 150/246 (60%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGERVSIATFKAQTTRHRIMGILNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA ++AD ++ + D + P++ E +E+ +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFS-ESALVDADVLLYVTDTIEKPDKNKEFVEKV---RNLDIPVLLL 117
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL + K + EW+ D E+IP+SAK V+ + I LP P Y+ K
Sbjct: 118 VNKIDLTNQDNLVKLVEEWHGLLPDA-EIIPISAKAKFNVDAVMKRITELLPDSPPYFGK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D ++ P RFFV EIIREKI + Y E+PY+ +V V +K + I I VE+ SQ
Sbjct: 177 DQWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVEQFKEEAKSIH-IHAVIYVERESQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|349686513|ref|ZP_08897655.1| GTPase Era [Gluconacetobacter oboediens 174Bp2]
Length = 304
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 137/245 (55%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q++L DTPGI
Sbjct: 11 RCGFVAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRNHTQILLVDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ + LD M+ + +AD +++VDA + + + K +L LVL
Sbjct: 71 FQPR-RKLDRAMVAAAWTGSDDADITLLIVDARAGMTDALRAIATRLAEQKRRL--WLVL 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL++ + V+ V VSA+ G GV+D+ D + LP GP YP+D
Sbjct: 128 NKTDLVRRDALLPLTAELSSILPVEHVFMVSARSGEGVDDLLDRLAADLPAGPYLYPEDD 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R E++RE+IF+Q EVPYA ++ RP I+V I V + S K
Sbjct: 188 LTDLPDRLLAAELVREQIFLQTHEEVPYAATAETEGFQERPDGSVRIEVTIYVARASHKA 247
Query: 354 ILIGK 358
ILIG+
Sbjct: 248 ILIGE 252
>gi|104774144|ref|YP_619124.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514234|ref|YP_813140.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815887|ref|YP_005852278.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|122275034|sp|Q04A20.1|ERA_LACDB RecName: Full=GTPase Era
gi|122983938|sp|Q1G9W6.1|ERA_LACDA RecName: Full=GTPase Era
gi|103423225|emb|CAI98053.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|116093549|gb|ABJ58702.1| GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125924|gb|ADY85254.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 301
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 150/248 (60%), Gaps = 8/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q++ DTPG
Sbjct: 7 HKSGFVALVGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKISGIYTEDDMQVVFVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV-GDHKD-KLPIL 230
I K LD M K S+ + D ++ +VDA +A + EE V G KD +P+
Sbjct: 67 IF-KSHSDLDEYMDKASLSSLKDVDLVMFMVDAKEAGKG-----EEYVAGLLKDLDIPVF 120
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D + P E+ ++ Y+ E +P+SA+ G+GV+D+ + LP GP YY
Sbjct: 121 LVINKIDQVHPNELLPIIDSYQAVGKFAEFLPISARQGNGVDDLLKTLKDYLPEGPQYYA 180
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP++ V V R K I I VEK+
Sbjct: 181 SDEITDRPEYFVVAEMIREQILRLTDQEVPHSTAVWVDQMNQRINGKLQIDATIFVEKDG 240
Query: 351 QKIILIGK 358
QK I+IG+
Sbjct: 241 QKRIIIGQ 248
>gi|336064759|ref|YP_004559618.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
gi|334282959|dbj|BAK30532.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
Length = 298
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + L M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPK-NALGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLMNILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVIVESMKRDPETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGTML 250
>gi|300778405|ref|ZP_07088263.1| GTP-binding protein Era [Chryseobacterium gleum ATCC 35910]
gi|300503915|gb|EFK35055.1| GTP-binding protein Era [Chryseobacterium gleum ATCC 35910]
Length = 291
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 149/246 (60%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEDDLQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ K + L MM V+ + +AD + +VD E + ++E+ +K +P+LL+
Sbjct: 62 VLDPK-YGLQEKMMDFVKDSLQDADVFLFIVDVTDKAEPSEFLIEKL---NKIPVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D + K + EW+ + E++P+SA E I I + LP P YY K
Sbjct: 118 LNKVDQTDQAGLEKLVEEWHNRIPKA-EILPISALNAFNTEVILPKIKSLLPENPPYYDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D ++ PERFFV E IREKI + Y E+PY+ +V +K + FI I VE+++Q
Sbjct: 177 DQFTDKPERFFVNETIREKILLNYDKEIPYSVEVVTEQFKEKEGII-FIDSIIYVERDTQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|373460998|ref|ZP_09552746.1| GTP-binding protein Era [Prevotella maculosa OT 289]
gi|371954076|gb|EHO71894.1| GTP-binding protein Era [Prevotella maculosa OT 289]
Length = 312
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 153/248 (61%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 21 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDCQIVFSDTPG 80
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM+ SA +AD ++ + D + PE+ + L++ K +P+LL+
Sbjct: 81 VLKPNYKM-QEMMLAFSESALKDADILLYVTDVVENPEKNLDFLDKV---RKMAIPVLLL 136
Query: 233 LNK---KDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+NK D G+I + W+ + E++P+SAK GV+ + I LP PAY+
Sbjct: 137 INKIDESDQKTLGDIVTR--WHALLPNA-EILPLSAKNKFGVDILLKRIKELLPESPAYF 193
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
K+ +++ P RFFV EIIREKI + Y E+PY+ +V V +K T K + I VE++
Sbjct: 194 DKEQLTDKPARFFVSEIIREKILLYYDKEIPYSVEVRVERFKEDDT-KIHVNAIIYVERD 252
Query: 350 SQKIILIG 357
SQK I+IG
Sbjct: 253 SQKGIIIG 260
>gi|337282415|ref|YP_004621886.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 15912]
gi|335370008|gb|AEH55958.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 15912]
Length = 299
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTNKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|418027356|ref|ZP_12666015.1| GTP-binding protein era [Streptococcus thermophilus CNCM I-1630]
gi|354692003|gb|EHE91869.1| GTP-binding protein era [Streptococcus thermophilus CNCM I-1630]
Length = 299
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDRVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKKGAML 251
>gi|379705760|ref|YP_005204219.1| GTP-binding protein era [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682459|gb|AEZ62748.1| GTP-binding protein era [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 298
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYRTDTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + +P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIIERL--KAANIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLLNILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V V S K P T K +I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVIVDSMKRDPETDKVYIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKKGAML 250
>gi|422823153|ref|ZP_16871341.1| GTP-binding protein Era [Streptococcus sanguinis SK405]
gi|422826760|ref|ZP_16874939.1| GTP-binding protein Era [Streptococcus sanguinis SK678]
gi|422855100|ref|ZP_16901758.1| GTP-binding protein Era [Streptococcus sanguinis SK1]
gi|422862083|ref|ZP_16908715.1| GTP-binding protein Era [Streptococcus sanguinis SK408]
gi|422865052|ref|ZP_16911677.1| GTP-binding protein Era [Streptococcus sanguinis SK1058]
gi|324993803|gb|EGC25722.1| GTP-binding protein Era [Streptococcus sanguinis SK405]
gi|324994878|gb|EGC26791.1| GTP-binding protein Era [Streptococcus sanguinis SK678]
gi|327463077|gb|EGF09398.1| GTP-binding protein Era [Streptococcus sanguinis SK1]
gi|327474678|gb|EGF20083.1| GTP-binding protein Era [Streptococcus sanguinis SK408]
gi|327490236|gb|EGF22024.1| GTP-binding protein Era [Streptococcus sanguinis SK1058]
Length = 299
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSYLIDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|290968422|ref|ZP_06559961.1| GTP-binding protein Era [Megasphaera genomosp. type_1 str. 28L]
gi|290781418|gb|EFD94007.1| GTP-binding protein Era [Megasphaera genomosp. type_1 str. 28L]
Length = 299
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 145/244 (59%), Gaps = 3/244 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VAV+G+PNVGKSTL N ++ QK+SIV++K QTTR+RIL I + Q++ DTPGI
Sbjct: 8 SGFVAVVGRPNVGKSTLINYIVRQKVSIVSDKAQTTRNRILCIYTDAAGQIVFLDTPGIH 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
+ K H L M + + D ++ LV + D + E + + K+P+ L++N
Sbjct: 68 KPK-HKLGEYMDAAAYQSLRDIDAVLFLVAGNEKKGPGDLFVAEKL--NACKVPVFLLIN 124
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K DL+ EI +K+ Y +IPVSA+ G V + + LP GP Y+P+D+V
Sbjct: 125 KVDLLTKAEILQKITEYRSVYPFAGIIPVSARTGDNVATVMGELKKILPPGPQYFPEDMV 184
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
++ PER EIIREK+ + R E+P+A V V K R K +I+ + VE+NSQK I
Sbjct: 185 TDQPERVLAAEIIREKLLLSLREEIPHAIAVYVDEMKKREKNKVYIRATVYVERNSQKRI 244
Query: 355 LIGK 358
+IGK
Sbjct: 245 VIGK 248
>gi|372209537|ref|ZP_09497339.1| GTPase Era [Flavobacteriaceae bacterium S85]
Length = 293
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N +G+KLSI+T+K QTTRHRILGI + +Q++ DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNDEHHQILFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + + + MM V+SA +AD ++ +V+ + E DE E + K P+LL+
Sbjct: 63 II-KPAYEMQASMMDFVKSAFEDADVLIYMVEIGEK-ELKDEAFFEKIKS--SKAPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D +I +K+++++ V +SA + + D I LP P +YPKD
Sbjct: 119 INKIDTSNQEQIEEKMQYWQSKVPNANVYLISALEKFNILPVFDKIKELLPESPPFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PERFFV E IREKI + Y+ E+PYA ++ + I+ I+VE+ +QK
Sbjct: 179 QLTDKPERFFVNEAIREKILLNYKKEIPYAVEI-LTEEFFEEDEIIRIRAIIMVERETQK 237
Query: 353 IILIG 357
I+IG
Sbjct: 238 GIIIG 242
>gi|329962636|ref|ZP_08300584.1| ribosome biogenesis GTPase Era [Bacteroides fluxus YIT 12057]
gi|328529667|gb|EGF56565.1| ribosome biogenesis GTPase Era [Bacteroides fluxus YIT 12057]
Length = 305
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 155/246 (63%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 14 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 73
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ ++ +E+ + ++P+LL+
Sbjct: 74 VLKPNYKLQESMLNFST-SALADADVLLYVTDVVETPDKHNDFVEKVA---RMEVPVLLL 129
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E +++ E+IP+SA V+ + + LP P Y+ KD
Sbjct: 130 VNKIDLSNQEKLVELVEAWKELLPKAEIIPISAATKFNVDYVMKRVKELLPDSPPYFDKD 189
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V+V +K K + I VE++SQK
Sbjct: 190 QWTDKPARFFVTEIIREKILLYYDKEIPYSVEVSVEQFK-EEAKKIHVSAVIYVERDSQK 248
Query: 353 IILIGK 358
I+IGK
Sbjct: 249 GIIIGK 254
>gi|423346895|ref|ZP_17324582.1| GTP-binding protein Era [Parabacteroides merdae CL03T12C32]
gi|409218556|gb|EKN11524.1| GTP-binding protein Era [Parabacteroides merdae CL03T12C32]
Length = 296
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 155/245 (63%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIIGIVNTADMQIVYSDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + + G +AD ++ + D + ++ +E L++ K + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSQSALG-DADVLLYVTDVVEKIDKNEEFLQKV---QKVECPVLLL 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTTTQPELEKLVAEWKELLPKAEIIPISALSNFNIDYVKRRVEDLMPESPPYFEKD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEAELIH-IKALIIVERDSQK 239
Query: 353 IILIG 357
I+IG
Sbjct: 240 GIIIG 244
>gi|408790550|ref|ZP_11202168.1| GTP-binding protein Era [Lactobacillus florum 2F]
gi|408520097|gb|EKK20191.1| GTP-binding protein Era [Lactobacillus florum 2F]
Length = 303
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 146/245 (59%), Gaps = 3/245 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VA++G+PNVGKST N++IGQK++I+++K QTTR++I G+ + + Q++ DTPG
Sbjct: 7 YKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSSKAQTTRNKIQGVYTTKQAQIVFLDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ K LD M S+ D I+++V A + D L + + K P+ LV
Sbjct: 67 V-HKPHTKLDEYMDDAALSSLQEVDAIILMVSATETRGAGDNYLIKQL--QNTKAPVYLV 123
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ L Y+K D V P+SA G+ V ++ ++ LP GP YYP+D
Sbjct: 124 INKIDQVHPDQLLPILATYQKAYDWKAVFPISALQGNNVNELLQDLVLNLPAGPQYYPED 183
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V EIIREKI E+P++ V V K K I+ I+VE+ Q+
Sbjct: 184 QITDHPERFIVQEIIREKILENTSQELPHSVAVYVDRMKPNENGKLQIEASIMVEREGQR 243
Query: 353 IILIG 357
I+IG
Sbjct: 244 RIIIG 248
>gi|450105328|ref|ZP_21859840.1| GTP-binding protein Era [Streptococcus mutans SF14]
gi|449224929|gb|EMC24553.1| GTP-binding protein Era [Streptococcus mutans SF14]
Length = 299
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSIAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IG+ L
Sbjct: 241 GIIIGRQGAML 251
>gi|189425186|ref|YP_001952363.1| GTP-binding protein Era [Geobacter lovleyi SZ]
gi|259645944|sp|B3E422.1|ERA_GEOLS RecName: Full=GTPase Era
gi|189421445|gb|ACD95843.1| GTP-binding protein Era [Geobacter lovleyi SZ]
Length = 296
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 150/251 (59%), Gaps = 6/251 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +K+G+V+++G+PNVGKSTL N+++G+K+ V++KPQTTR+ I GI S Q++
Sbjct: 2 SDSTYKAGFVSIIGRPNVGKSTLLNRILGEKIVAVSDKPQTTRNVIRGILSDETSQIVFV 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + ++ M+ + D ++++VDA ++I+E + + K P
Sbjct: 62 DTPGIHTARTR-INRAMVDAAMTVVTGIDLMLLVVDAT---QKIEETFIKDIC-SKAGAP 116
Query: 229 ILLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
I LVLNK D + P E + +E Y + D E+IP+SA+ G +E + D + LP G A
Sbjct: 117 IYLVLNKIDQVTPKEKLFTVIEGYTRLYDFPEIIPISAQSGSNIERLVDLVREHLPEGEA 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
+P DI+++ PE+F V E+IREK+F EVPY V V ++ R I I+VE
Sbjct: 177 LFPDDILTDLPEKFIVAELIREKVFRLTNREVPYGTAVVVEAFAERENGLVAINATIMVE 236
Query: 348 KNSQKIILIGK 358
++S K I+IGK
Sbjct: 237 RDSHKGIIIGK 247
>gi|386585717|ref|YP_006082119.1| GTP-binding protein Era [Streptococcus suis D12]
gi|353737863|gb|AER18871.1| GTP-binding protein Era [Streptococcus suis D12]
Length = 299
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + + + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRHQMDFKEIVPISATQGNNVNRLMEILKENLDEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDEFTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|262282704|ref|ZP_06060472.1| GTP-binding protein [Streptococcus sp. 2_1_36FAA]
gi|262261995|gb|EEY80693.1| GTP-binding protein [Streptococcus sp. 2_1_36FAA]
Length = 299
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVIDSMKRDDETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|320527305|ref|ZP_08028490.1| GTP-binding protein Era [Solobacterium moorei F0204]
gi|320132329|gb|EFW24874.1| GTP-binding protein Era [Solobacterium moorei F0204]
Length = 297
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 148/250 (59%), Gaps = 4/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA+ G+PN GKSTL N +IG+K++IV++KPQTTR I GI + Q+I DTPGI
Sbjct: 2 RSGFVALAGRPNAGKSTLINSLIGEKVAIVSSKPQTTRSEIRGIYTDENCQIIFTDTPGI 61
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K L+S M K D I ++VDA + DE + V + LP+ LVL
Sbjct: 62 HKPKFR-LESRMNKEAADVIQGVDLIYLVVDASTPYAKGDEFVLNMVKNTG--LPVFLVL 118
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++P +I K ++ +++ D E P+SAK+G ED+ LP G YP ++
Sbjct: 119 NKMDKMQPEKIVKVIQQWQERYDFAEYFPLSAKFGRSFEDLIKTTSKYLPEGDLLYPAEM 178
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
S+ E F + E+IREKI +Q +EVP+A V ++ K K +IQ I+VE++SQK
Sbjct: 179 TSDGAENFRIAELIREKILIQTEDEVPHAAAV-LIENKEFKKDKVYIQAMILVERDSQKG 237
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 238 IMIGKQGQML 247
>gi|154494317|ref|ZP_02033637.1| hypothetical protein PARMER_03671 [Parabacteroides merdae ATCC
43184]
gi|423725492|ref|ZP_17699629.1| GTP-binding protein Era [Parabacteroides merdae CL09T00C40]
gi|154085761|gb|EDN84806.1| ribosome biogenesis GTPase Era [Parabacteroides merdae ATCC 43184]
gi|409234616|gb|EKN27444.1| GTP-binding protein Era [Parabacteroides merdae CL09T00C40]
Length = 296
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 155/245 (63%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIIGIVNTADMQIVYSDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + + G +AD ++ + D + ++ +E L++ K + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSQSALG-DADVLLYVTDVVEKIDKNEEFLQKV---QKVECPVLLL 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTTTQPELEKLVAEWKELLPKAEIIPISALSNFNIDYVKRRVEDLMPESPPYFEKD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEAELIH-IKALIIVERDSQK 239
Query: 353 IILIG 357
I+IG
Sbjct: 240 GIIIG 244
>gi|55820698|ref|YP_139140.1| GTP-binding protein Era [Streptococcus thermophilus LMG 18311]
gi|386344312|ref|YP_006040476.1| GTP-binding protein [Streptococcus thermophilus JIM 8232]
gi|445374328|ref|ZP_21426376.1| GTPase Era [Streptococcus thermophilus MTCC 5460]
gi|445388833|ref|ZP_21428091.1| GTPase Era [Streptococcus thermophilus MTCC 5461]
gi|55736683|gb|AAV60325.1| GTP-binding protein [Streptococcus thermophilus LMG 18311]
gi|339277773|emb|CCC19521.1| GTP-binding protein [Streptococcus thermophilus JIM 8232]
gi|444750581|gb|ELW75383.1| GTPase Era [Streptococcus thermophilus MTCC 5461]
gi|444750678|gb|ELW75474.1| GTPase Era [Streptococcus thermophilus MTCC 5460]
Length = 299
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKKGAML 251
>gi|330993373|ref|ZP_08317308.1| GTP-binding protein era-like protein [Gluconacetobacter sp. SXCC-1]
gi|329759403|gb|EGG75912.1| GTP-binding protein era-like protein [Gluconacetobacter sp. SXCC-1]
Length = 305
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 139/245 (56%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q++L DTPGI
Sbjct: 12 RCGFVAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRHGAQILLVDTPGI 71
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ + LD M+ + +AD +++VDA + + + K +L LVL
Sbjct: 72 FQPR-RRLDRAMVAAAWTGSDDADITLLIVDARAGMTDALRAIAARLAEQKRRL--WLVL 128
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+K + V+ V VSA+ G GV+D+ D + LP GP YP+D
Sbjct: 129 NKTDLVKRDTLLPLTAELSAILPVEHVFMVSARSGEGVDDLLDRLAAALPAGPYLYPEDD 188
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R E++RE+IF+Q EVPYA V +++ RP I+V + V + S K
Sbjct: 189 LTDLPDRLLAAELVREQIFLQTHEEVPYAATVETEAFQERPDGSVRIEVTVYVARASHKA 248
Query: 354 ILIGK 358
ILIG+
Sbjct: 249 ILIGE 253
>gi|218262399|ref|ZP_03476879.1| hypothetical protein PRABACTJOHN_02554 [Parabacteroides johnsonii
DSM 18315]
gi|423343032|ref|ZP_17320746.1| GTP-binding protein Era [Parabacteroides johnsonii CL02T12C29]
gi|218223402|gb|EEC96052.1| hypothetical protein PRABACTJOHN_02554 [Parabacteroides johnsonii
DSM 18315]
gi|409216708|gb|EKN09691.1| GTP-binding protein Era [Parabacteroides johnsonii CL02T12C29]
Length = 296
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 155/245 (63%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIIGIVNTADMQIVYSDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + + G +AD ++ + D + ++ +E L++ K + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSQSALG-DADVLLYVTDVVEKIDKNEEFLQKV---QKVECPVLLL 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTTTQQELEKLVAEWKELLPKAEIIPISALSNFNIDYVKRRVEDLMPESPPYFEKD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ ++VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEAELIH-IKALVIVERDSQK 239
Query: 353 IILIG 357
I+IG
Sbjct: 240 GIIIG 244
>gi|255535475|ref|YP_003095846.1| GTP-binding protein Era [Flavobacteriaceae bacterium 3519-10]
gi|255341671|gb|ACU07784.1| GTP-binding protein Era [Flavobacteriaceae bacterium 3519-10]
Length = 291
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 153/246 (62%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPNVGKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGKPNVGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEEDLQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ K + L MM V+ + +AD + +VD E + ++++ +K +P+L++
Sbjct: 62 VLDPK-YGLQERMMDFVKDSLQDADVFLFIVDILDKSEPFEYLVDKL---NKIPVPVLIL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D ++ K +E W+E+ E++P+SA G E I + + LP P YY K
Sbjct: 118 VNKIDESNQEDLEKVMELWHERIPKA-EILPISALKGFNTEIILPKLKSLLPENPPYYDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++ ++ PERFFV E IREKI + Y E+PY+ +V +K FI I VE+++Q
Sbjct: 177 EMYTDKPERFFVNEAIREKILLNYEKEIPYSVEVVTEMFKENEGII-FIDSVIYVERDTQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|402574347|ref|YP_006623690.1| GTP-binding protein Era [Desulfosporosinus meridiei DSM 13257]
gi|402255544|gb|AFQ45819.1| GTP-binding protein Era [Desulfosporosinus meridiei DSM 13257]
Length = 303
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 154/253 (60%), Gaps = 13/253 (5%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
SH +SG+V+V+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q++
Sbjct: 6 SH-QFRSGFVSVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQIVFL 64
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDHK 224
DTPGI + K H L M+ + + D I+ +VD E I E+L++
Sbjct: 65 DTPGIHKPK-HKLGEFMVGAAKESMREVDAILYMVDLSAEFGPGEEFIIEMLKQ------ 117
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K P +L LNK DL+ ++ ++++ + D ++P+SAK G +++ I K+P
Sbjct: 118 TKTPCVLALNKVDLLTKEQLMRRIQEFSGLADFKAIVPISAKTGENTDELLKVIFDKMPN 177
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP+D V++ PERF + E++REK+ R+EVP++ V + S + + T ++ ++
Sbjct: 178 GPMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVVIESVEEKKTLVK-VRAQV 236
Query: 345 VVEKNSQKIILIG 357
+VE++SQK I+IG
Sbjct: 237 IVERDSQKGIIIG 249
>gi|319900092|ref|YP_004159820.1| GTP-binding protein Era [Bacteroides helcogenes P 36-108]
gi|319415123|gb|ADV42234.1| GTP-binding protein Era [Bacteroides helcogenes P 36-108]
Length = 293
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 154/246 (62%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ ++ +E+ + ++P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADVLLYVTDVVETPDKHNDFVEKVA---QMEVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E +++ E++P+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTNQEKLVELVEAWKELLPKAEIVPISATTKFNVDYVMKRIKEFLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVEQFK-EEAKKIHINAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|218128436|ref|ZP_03457240.1| hypothetical protein BACEGG_00004 [Bacteroides eggerthii DSM 20697]
gi|329957357|ref|ZP_08297877.1| ribosome biogenesis GTPase Era [Bacteroides clarus YIT 12056]
gi|217989327|gb|EEC55640.1| ribosome biogenesis GTPase Era [Bacteroides eggerthii DSM 20697]
gi|328523070|gb|EGF50173.1| ribosome biogenesis GTPase Era [Bacteroides clarus YIT 12056]
Length = 293
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + L M+ SA +AD ++ + D + P++ ++ +E+ H + +P+LL+
Sbjct: 62 VL-KPTYKLQESMLNFSTSALTDADVLLYVTDVVETPDKHNDFVEK--VSHME-VPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 VNKIDLSNQEKLVELVEAWKELLPNAEIIPISAATKFNVDYVMKRIKELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EEEKKIHINAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|376260938|ref|YP_005147658.1| GTP-binding protein Era [Clostridium sp. BNL1100]
gi|373944932|gb|AEY65853.1| GTP-binding protein Era [Clostridium sp. BNL1100]
Length = 298
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 153/254 (60%), Gaps = 7/254 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG+V+V+G+PNVGKSTL N + GQK++I+++KPQTTR+ I G+ + E Q+IL DTP
Sbjct: 2 SYKSGFVSVIGRPNVGKSTLLNTITGQKIAIMSDKPQTTRNTIRGVITNKECQLILIDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERID-EILEEGVGDHKDKLPI 229
GI + K + + M+ NV S I D ++ LV+A P D I+++ + K P+
Sbjct: 62 GIHKPKTKLGEYMV--NVASETIKEVDLVLFLVEANAQPGAQDINIIQQL---KQVKTPV 116
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L+LNK DLI ++ ++ Y K D +IP+SA G++ I L +P GP ++
Sbjct: 117 FLILNKVDLISKDKLLAIIDSYSKLMDFKAIIPISALKNDGIDIILKEALDYIPEGPQFF 176
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
+D++++ PE+ E+IREK+ + +EVP+ V V S+K R IQ I EK+
Sbjct: 177 SEDMLTDQPEKVIAAEMIREKVLLNLDDEVPHGVGVEVTSFKEREDGLINIQATIYCEKS 236
Query: 350 SQKIILIGKVSPFL 363
S K I+IGK L
Sbjct: 237 SHKGIIIGKQGNML 250
>gi|399516944|ref|ZP_10758520.1| GTP-binding protein Era [Leuconostoc pseudomesenteroides 4882]
gi|398648198|emb|CCJ66547.1| GTP-binding protein Era [Leuconostoc pseudomesenteroides 4882]
Length = 303
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 151/246 (61%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I + DA R D+ + + + + K+ PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVADASMPRGRGDDFIIDRLKEVKNT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y E + EV P+SA G V ++ D I+ L GP Y+ D
Sbjct: 125 NKIDLLAPNDLLNVIASYQENAPEWTEVFPISATEGDNVPELLDNIVANLDEGPQYFDSD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKIAREDEEKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 HIIIGK 250
>gi|319790169|ref|YP_004151802.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1]
gi|317114671|gb|ADU97161.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1]
Length = 305
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 161/251 (64%), Gaps = 9/251 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SGYVA+LG+PNVGKSTL N ++G K++IVT+KPQTTRHRI+G+ + Q++ DTPGI
Sbjct: 8 RSGYVAILGRPNVGKSTLLNSLLGTKVAIVTDKPQTTRHRIVGVKHLKDAQIVFLDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPILLV 232
++K L+ M + S +AD I+ L+DA + D + + +G+ K K +++V
Sbjct: 68 HKEKFE-LNRYMNEIAFSVVPDADIILFLIDARQGLTEADRKILQKIGEEKRKDTKVIVV 126
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D + E+ + E +++F VDE+IP+SA G ++ + + +L LP GP YY +
Sbjct: 127 INKIDGVNKEELLPLIEEIHKEFPFVDEIIPISASRGTNLDRLLELLLKYLPEGPKYYEE 186
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD----FIQVEIVVE 347
+V++ P F+ EIIREKI + R EVP+A V VV+ + P K+ I +I+VE
Sbjct: 187 HMVTDQPLEQFIAEIIREKIMLLTREEVPHATTVQVVNIQ--PGDKNPNMLVIDADIIVE 244
Query: 348 KNSQKIILIGK 358
K+SQK I+IGK
Sbjct: 245 KDSQKAIIIGK 255
>gi|315640637|ref|ZP_07895743.1| GTP-binding protein Era [Enterococcus italicus DSM 15952]
gi|315483665|gb|EFU74155.1| GTP-binding protein Era [Enterococcus italicus DSM 15952]
Length = 298
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 151/239 (63%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + + Q++ DTPG
Sbjct: 4 HKSGFVALVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTKDAQIVFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K + D M+++ SA D I+ ++ A + + D+++ E + K +P+ LV
Sbjct: 64 IHKPKSRLGD-FMVESAFSALNEVDVILFMISADQKRGKGDDLIIERL--KKQSVPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P + + + Y + D EV+P+SA G+ + I +L GP Y+P+D
Sbjct: 121 VNKLDKVHPDALLEVIADYSQQMDFAEVVPISATEGNNFPTLMATIEKELEEGPQYFPED 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
V++HPE F V E+IREK+ R+EVP++ V V S K K IQ I+VE++SQ
Sbjct: 181 QVTDHPEYFIVSELIREKVLQFTRDEVPHSVAVVVDSMKKNENEKIAIQATIIVERDSQ 239
>gi|88802178|ref|ZP_01117706.1| putative GTP-binding protein [Polaribacter irgensii 23-P]
gi|88782836|gb|EAR14013.1| putative GTP-binding protein [Polaribacter irgensii 23-P]
Length = 294
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 153/247 (61%), Gaps = 7/247 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
HK+G+V ++G PNVGKSTL N ++G+KLSI+T K QTTRHRILGI + +YQ++ DTP
Sbjct: 2 THKAGFVNIIGNPNVGKSTLMNALVGEKLSIITAKAQTTRHRILGIVNEEDYQIVFSDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GII K + L S MM V+SA +AD ++ +V+ + + + + ++P++L
Sbjct: 62 GII-KPAYELQSSMMDFVKSAFEDADILIYMVEVGEKELKNEAFFHRIL---HSEIPVIL 117
Query: 232 VLNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+LNK D E+ +K+E W +K + D V +SA V + D I LP GPA+YP
Sbjct: 118 LLNKIDKSSQEEVEEKIEYWRDKVPNAD-VFVISALEKFNVPAVFDKIKELLPEGPAFYP 176
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ ERFFV E IREKI + Y+ E+PY+ +V + T I+ I+VE+ +
Sbjct: 177 KDQLTDKSERFFVNEKIREKILIHYKKEIPYSVEVETEEFTEEETIVR-IRSIIMVERET 235
Query: 351 QKIILIG 357
QK I+IG
Sbjct: 236 QKGIIIG 242
>gi|424836384|ref|ZP_18261033.1| GTPase Era [Clostridium sporogenes PA 3679]
gi|365977078|gb|EHN13181.1| GTPase Era [Clostridium sporogenes PA 3679]
Length = 296
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 147/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ+I DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P + D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGKGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + D E+IP+SA G V+ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKTYSELMDFQEIIPISALKGKNVDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNDKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|171780162|ref|ZP_02921066.1| hypothetical protein STRINF_01950 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281510|gb|EDT46945.1| ribosome biogenesis GTPase Era [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 298
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + +P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIIERL--KAANIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVEKLLNILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVIVDSMKRDPETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKKGAML 250
>gi|449994625|ref|ZP_21822618.1| GTP-binding protein Era [Streptococcus mutans A9]
gi|449185131|gb|EMB87033.1| GTP-binding protein Era [Streptococcus mutans A9]
Length = 299
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMACDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|300812180|ref|ZP_07092622.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|313123894|ref|YP_004034153.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|422843871|ref|ZP_16890581.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
gi|300496816|gb|EFK31896.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|312280457|gb|ADQ61176.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|325686031|gb|EGD28089.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 301
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 150/248 (60%), Gaps = 8/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N++IGQK++I + KPQTTR++I GI + + Q++ DTPG
Sbjct: 7 HKSGFVALVGRPNVGKSTLMNRLIGQKVAITSAKPQTTRNKISGIYTEDDMQVVFVDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGV-GDHKD-KLPIL 230
I K LD M K S+ + D ++ +VDA +A + EE V G KD +P+
Sbjct: 67 IF-KSHSDLDEYMDKASLSSLKDVDLVMFMVDAKEAGKG-----EEYVAGLLKDLDIPVF 120
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D + P ++ ++ Y+ E +P+SA+ G+GV+D+ + LP GP YY
Sbjct: 121 LVINKIDQVHPNDLLPIIDSYQAVGKFAEFLPISARQGNGVDDLLKTLKDYLPEGPQYYA 180
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++ PE F V E+IRE+I EVP++ V V R K I I VEK+
Sbjct: 181 SDEVTDRPEYFVVAEMIREQILRLTDQEVPHSTAVWVDQMNQRINGKLQIDATIFVEKDG 240
Query: 351 QKIILIGK 358
QK I+IG+
Sbjct: 241 QKRIIIGQ 248
>gi|389856232|ref|YP_006358475.1| GTP-binding protein Era [Streptococcus suis ST1]
gi|353739950|gb|AER20957.1| GTP-binding protein Era [Streptococcus suis ST1]
Length = 299
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + E Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + D E++P+SA G+ V + + + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRQQMDFKEIVPISAIQGNNVNRLMEILKENLDEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVIESMKRDEFTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|387626322|ref|YP_006062497.1| GTP-binding protein Era [Streptococcus pneumoniae INV104]
gi|417693889|ref|ZP_12343078.1| GTP-binding protein Era [Streptococcus pneumoniae GA47901]
gi|444382165|ref|ZP_21180369.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8106]
gi|444384807|ref|ZP_21182898.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8203]
gi|301794107|emb|CBW36513.1| GTP-binding protein Era homolog [Streptococcus pneumoniae INV104]
gi|332204972|gb|EGJ19037.1| GTP-binding protein Era [Streptococcus pneumoniae GA47901]
gi|444251567|gb|ELU58036.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8203]
gi|444253125|gb|ELU59584.1| ribosome biogenesis GTPase Era [Streptococcus pneumoniae PCS8106]
Length = 299
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HP+RF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPDRFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|262368561|ref|ZP_06061890.1| GTP-binding protein Era [Acinetobacter johnsonii SH046]
gi|262316239|gb|EEY97277.1| GTP-binding protein Era [Acinetobacter johnsonii SH046]
Length = 342
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 155/259 (59%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ +SG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSRAKSQAVFVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + DE++ E + + ++P++L
Sbjct: 96 GMHKKEVRAINKMMNRAASSALRDVNLVLFVLDADKWTQN-DELVLEKLKNA--EMPVIL 152
Query: 232 VLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D ++ A L + K + E++PVSA G ++ +RD I LP P Y
Sbjct: 153 VINKIDTLENKNHALPLIQERAKLMNFAEIVPVSALRGANLDHLRDTIEKYLPFQPPMYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT----------RPT-AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT RP A +
Sbjct: 213 LDQLTDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRPKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|150003044|ref|YP_001297788.1| GTP-binding protein Era [Bacteroides vulgatus ATCC 8482]
gi|294775668|ref|ZP_06741176.1| GTP-binding protein Era [Bacteroides vulgatus PC510]
gi|319642180|ref|ZP_07996840.1| GTP-binding protein [Bacteroides sp. 3_1_40A]
gi|345518208|ref|ZP_08797663.1| GTP-binding protein Era [Bacteroides sp. 4_3_47FAA]
gi|423314851|ref|ZP_17292783.1| GTP-binding protein Era [Bacteroides vulgatus CL09T03C04]
gi|149931468|gb|ABR38166.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254836475|gb|EET16784.1| GTP-binding protein Era [Bacteroides sp. 4_3_47FAA]
gi|294450512|gb|EFG19004.1| GTP-binding protein Era [Bacteroides vulgatus PC510]
gi|317386166|gb|EFV67085.1| GTP-binding protein [Bacteroides sp. 3_1_40A]
gi|392681033|gb|EIY74395.1| GTP-binding protein Era [Bacteroides vulgatus CL09T03C04]
Length = 293
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 153/248 (61%), Gaps = 9/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA ++AD ++ + D + ++ + +E+ K+P+LL+
Sbjct: 62 VVKPNYKLQESMLNFS-ESALVDADILLYVTDVVEKTDKNADFIEKV---RNVKVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL ++ K +E W+E+ E+IP+SA V+ + I LP P Y+ K
Sbjct: 118 INKIDLTNQEDLVKLVEAWHEQLPQA-EIIPISATSKFNVDTVMKRIKELLPDSPPYFGK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 350
D ++ P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ S
Sbjct: 177 DQWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVEQFK--EDAKSIHINAVIYVERES 234
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 235 QKGIIIGK 242
>gi|186681007|ref|YP_001864203.1| GTP-binding protein Era [Nostoc punctiforme PCC 73102]
gi|186463459|gb|ACC79260.1| GTP-binding protein Era [Nostoc punctiforme PCC 73102]
Length = 318
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 167/291 (57%), Gaps = 41/291 (14%)
Query: 94 MASPDDYEIEEFDYASH-------PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNK 146
M S D+Y F ++ P+ KSG++ ++G+PNVGKSTL NQ++GQK++I +
Sbjct: 1 MTSIDNYN---FSFSGEVTIPQAPPDFKSGFIGIVGRPNVGKSTLMNQLVGQKIAITSPI 57
Query: 147 PQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD-- 204
QTTR+R+ GI + PE Q+I DTPG I K H L ++++N + A + D ++ +VD
Sbjct: 58 AQTTRNRLRGILTTPEAQLIFVDTPG-IHKPHHQLGEVLVQNAKIAIESVDVVLFVVDGA 116
Query: 205 -ACKAPER-IDEILEEGVGDHKDKLPILLVLNKKDLIKP----------GEIAKKLEWYE 252
AC + +R I E+L + K P++L +NK D +P ++A+ EW
Sbjct: 117 VACGSGDRYIAELLS------RSKTPVILGVNKTDQ-QPSDSQFLDDSYAQMAQSHEW-- 167
Query: 253 KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIF 312
E++ SAK G+ +++ ++ L +GP YYP D++++ PERF +GE+IRE+I
Sbjct: 168 ------EIVKFSAKTSAGLPQLQELLIEHLEIGPLYYPPDLITDQPERFIMGELIREQIL 221
Query: 313 MQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
+ R EVP++ + + + P+ + I VE++SQK ILIGK L
Sbjct: 222 LLTREEVPHSVAIAIDLVEETPSITRVL-ATINVERDSQKGILIGKGGAML 271
>gi|296112101|ref|YP_003622483.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|339490683|ref|YP_004705188.1| GTP-binding protein [Leuconostoc sp. C2]
gi|295833633|gb|ADG41514.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|338852355|gb|AEJ30565.1| GTP-binding protein [Leuconostoc sp. C2]
Length = 303
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 152/248 (61%), Gaps = 7/248 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDAAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA R D+ + + + + PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVVDASMPRGRGDDFIINRLQEVSNT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDV---DEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
NK DLI P ++ + Y+ TD EV P+SA+ G V ++ D I+ L GP Y+
Sbjct: 125 NKVDLISPQDLLTIIASYQ--TDAPGWTEVFPISAREGDNVPELLDNIVANLEEGPQYFD 182
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +
Sbjct: 183 ADQLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKISRENEEKIHIQASIIVERPT 242
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 243 QKNIIIGK 250
>gi|428315511|ref|YP_007113393.1| GTP-binding protein Era-like-protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428239191|gb|AFZ04977.1| GTP-binding protein Era-like-protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 315
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 158/266 (59%), Gaps = 24/266 (9%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A+ +KSG+V ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I
Sbjct: 17 AAPAGYKSGFVGIVGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTPEAQIIF 76
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH---- 223
DTPG I K H L ++++N R+A + D ++ +VD +E G GD
Sbjct: 77 VDTPG-IHKPHHQLGKVLVQNARTAIQSVDVVLFVVDGS---------VESGGGDRYIVE 126
Query: 224 ---KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWIL 279
K+P++L +NK D +P + YE+ + + V+ SA G GVE ++ ++
Sbjct: 127 ILSNCKVPVILGMNKLDE-QPSDCVLIDRTYEQIVNPEWPVVKFSALTGEGVESLQQLLI 185
Query: 280 TKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPY--ACQVNVVSYKTRPTAK 337
L +GP YYP D+V++ PERF +GE+IRE+I + R EVP+ A +++V + + T
Sbjct: 186 EHLEVGPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDIVQEEAKITR- 244
Query: 338 DFIQVEIVVEKNSQKIILIGKVSPFL 363
I I VE++SQK ILIGK L
Sbjct: 245 --ILATIHVERDSQKGILIGKSGSML 268
>gi|168485921|ref|ZP_02710429.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1087-00]
gi|418184787|ref|ZP_12821334.1| GTP-binding protein Era [Streptococcus pneumoniae GA47283]
gi|419510592|ref|ZP_14050236.1| GTP-binding protein Era [Streptococcus pneumoniae NP141]
gi|419530196|ref|ZP_14069726.1| GTP-binding protein Era [Streptococcus pneumoniae GA40028]
gi|421212944|ref|ZP_15669905.1| GTP-binding protein Era [Streptococcus pneumoniae 2070108]
gi|421215200|ref|ZP_15672128.1| GTP-binding protein Era [Streptococcus pneumoniae 2070109]
gi|183571044|gb|EDT91572.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1087-00]
gi|353851323|gb|EHE31319.1| GTP-binding protein Era [Streptococcus pneumoniae GA47283]
gi|379574195|gb|EHZ39139.1| GTP-binding protein Era [Streptococcus pneumoniae GA40028]
gi|379633785|gb|EHZ98354.1| GTP-binding protein Era [Streptococcus pneumoniae NP141]
gi|395580531|gb|EJG41012.1| GTP-binding protein Era [Streptococcus pneumoniae 2070108]
gi|395581333|gb|EJG41805.1| GTP-binding protein Era [Streptococcus pneumoniae 2070109]
Length = 299
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+ E++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMAERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|85860146|ref|YP_462348.1| GTP-binding protein [Syntrophus aciditrophicus SB]
gi|123738843|sp|Q2LVR8.1|ERA_SYNAS RecName: Full=GTPase Era
gi|85723237|gb|ABC78180.1| GTP-binding protein [Syntrophus aciditrophicus SB]
Length = 306
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 152/263 (57%), Gaps = 28/263 (10%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KL+I+T+KPQTTR+RI+GI + Q I DTPGI
Sbjct: 14 KSGFIGIIGRPNVGKSTLLNGILGEKLAIITHKPQTTRNRIMGIRNADNAQFIFVDTPGI 73
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL--- 230
L+ +M++ ++D ++++V+A +A H + LPI+
Sbjct: 74 HSASTP-LNRLMVRTATETFTDSDILLLVVEAGQAV-------------HPEDLPIIESL 119
Query: 231 --------LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKL 282
L+LNK DLI+ ++ ++ Y E+IP+SA G G+ + D + L
Sbjct: 120 KESGTISFLILNKIDLIRKEQLLPLMDAYRNLHSFAELIPISALTGEGIPLLLDELWKYL 179
Query: 283 PLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV 342
P GP Y+P D++++ ERF EIIREKI + E+PY+ V V ++K A++ I++
Sbjct: 180 PEGPQYFPDDMMTDQSERFLAAEIIREKILLLTHKEIPYSSAVVVDAFK-EDEARNLIRI 238
Query: 343 E--IVVEKNSQKIILIGKVSPFL 363
I VEK SQK I+IGK L
Sbjct: 239 SATINVEKESQKGIIIGKKGTML 261
>gi|342218410|ref|ZP_08711024.1| ribosome biogenesis GTPase Era [Megasphaera sp. UPII 135-E]
gi|341589822|gb|EGS33084.1| ribosome biogenesis GTPase Era [Megasphaera sp. UPII 135-E]
Length = 299
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 146/244 (59%), Gaps = 3/244 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++AV+G+PNVGKSTL N +I +K++IV++K QTTR+RIL I + QMI DTPGI
Sbjct: 8 SGFIAVIGRPNVGKSTLINHIIKEKVTIVSDKAQTTRNRILCIHTDENSQMIFLDTPGIH 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
+ K H L M + + + ++ LV D + E + + +P+ L++N
Sbjct: 68 KPK-HKLGEFMDDAAYQSLKDIEAVLFLVAGTDKKGPGDMFISEKLKNCT--VPVFLLIN 124
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K DL+ ++ + + Y + ++IP+SAK G V+ + D + LP GP Y+P D++
Sbjct: 125 KIDLLTKEQVLQAIMSYRELYPFAQIIPISAKRGENVDVVLDELKQILPEGPKYFPDDMI 184
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKII 354
++ PER V EI+REK+ + E+P+A V V KTR K +I+ I VE+NSQK I
Sbjct: 185 TDQPERLLVAEIVREKLLLVMNEEIPHAIAVYVEEMKTRSKNKVYIRTNIYVERNSQKRI 244
Query: 355 LIGK 358
+IGK
Sbjct: 245 VIGK 248
>gi|145220317|ref|YP_001131026.1| GTP-binding protein Era [Chlorobium phaeovibrioides DSM 265]
gi|145206481|gb|ABP37524.1| GTP-binding protein Era [Chlorobium phaeovibrioides DSM 265]
Length = 308
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 150/264 (56%), Gaps = 22/264 (8%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
++ P+ G+ +++G PN GKSTL N ++ KLSIVT+KPQTTR +I GI S Q+I
Sbjct: 4 SAAPSFSCGFTSIIGPPNAGKSTLLNALLDCKLSIVTHKPQTTRKKITGIYSDDSTQIIF 63
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPGI+E + L M+K R +AD I+ L+ K D E + H+D L
Sbjct: 64 LDTPGIMEPQ-QKLHEAMLKVTRDTLKDADAIIALLPFSKKNGPFDRAFAEEL--HRDWL 120
Query: 228 -----PILLVLNKKDLI-----KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDW 277
P++ V NK DL+ K E + EW + ++ +SA G G++++ D
Sbjct: 121 KNSGKPLIAVFNKSDLVNAEQQKEAEAFIRREW-----NPAAILSISALNGKGLQELVDA 175
Query: 278 ILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR---- 333
+ LP+ YP+D +S PERFF EIIREKIF+ Y EVPY+ +V V ++ +
Sbjct: 176 LRPYLPMHDPLYPEDALSTAPERFFASEIIREKIFLLYGREVPYSAEVVVDEFREQHEND 235
Query: 334 PTAKDFIQVEIVVEKNSQKIILIG 357
P KD I+ I+VE+++QK I+IG
Sbjct: 236 PKRKDLIRCSIIVERDTQKQIIIG 259
>gi|317475738|ref|ZP_07934997.1| GTP-binding protein Era [Bacteroides eggerthii 1_2_48FAA]
gi|316908121|gb|EFV29816.1| GTP-binding protein Era [Bacteroides eggerthii 1_2_48FAA]
Length = 293
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + L M+ SA +AD ++ + D + P++ ++ +E+ H + +P+LL+
Sbjct: 62 VL-KPTYKLQESMLNFSTSALTDADVLLYVTDVVETPDKHNDFVEK--VSHME-VPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 VNKIDLSNQEKLVELVEAWKELLPNAEIIPISAATKFNVDYVMKRIKELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEQFK-EEEKKIHINAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|374583187|ref|ZP_09656281.1| GTP-binding protein Era [Desulfosporosinus youngiae DSM 17734]
gi|374419269|gb|EHQ91704.1| GTP-binding protein Era [Desulfosporosinus youngiae DSM 17734]
Length = 311
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 149/254 (58%), Gaps = 12/254 (4%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
S +SG+V+V+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q+I
Sbjct: 12 VSKSEFRSGFVSVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQIIF 71
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDH 223
DTPGI + K H L M+ + + D I+ +VD E I E+L++
Sbjct: 72 LDTPGIHKPK-HKLGEFMVGTAKESMREVDVILYMVDLSSDFGPGEEFIIEMLKQ----- 125
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K P +L LNK DL+ ++ K++ + K D ++P+SAK G ++ I +LP
Sbjct: 126 -TKTPCVLALNKVDLLTKEQLMIKIQQFSKLADFKAIVPISAKTGENTNELLKVIFAQLP 184
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YYP+D V++ PERF + E++REK+ R+EVP++ V + + + T ++
Sbjct: 185 KGPMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVVIEEVQEKKTLVK-VRAL 243
Query: 344 IVVEKNSQKIILIG 357
++VE+ SQK I+IG
Sbjct: 244 VIVERESQKGIIIG 257
>gi|373452012|ref|ZP_09543930.1| GTP-binding protein Era [Eubacterium sp. 3_1_31]
gi|371967444|gb|EHO84915.1| GTP-binding protein Era [Eubacterium sp. 3_1_31]
Length = 301
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 150/253 (59%), Gaps = 6/253 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N+KSG++A++G+PN GKSTL N ++ +K++I T KPQTTR+ I GI + + Q I DTP
Sbjct: 2 NYKSGFIAIIGRPNAGKSTLLNALLNEKIAITTPKPQTTRNNISGILTREDAQFIFTDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L + +N +A AD +VDA ++ DE L E + + +P L
Sbjct: 62 GIHKPK-HELGKTLNRNAYTAIAEADVNFWVVDATQSFGSGDEFLLEKI--KQSHIPCFL 118
Query: 232 VLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+LNK DL+ ++ + L +W E+ T E+ PVSA + D+ + L GP ++P
Sbjct: 119 ILNKIDLLDKEKLIRTLQQWQERHT-FAEIFPVSALQKDNLNDLLEVTKGYLEEGPKFFP 177
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
++VS+H E+F + EIIREK+ + EVP++ V V+ K F+Q IVVE+ S
Sbjct: 178 DEMVSDHGEQFQIAEIIREKVLYKTNEEVPHSVAV-VIERKEETATAVFLQALIVVERTS 236
Query: 351 QKIILIGKVSPFL 363
QK ILIGK + +
Sbjct: 237 QKAILIGKQAAMI 249
>gi|422857990|ref|ZP_16904640.1| GTP-binding protein Era [Streptococcus sanguinis SK1057]
gi|327460961|gb|EGF07294.1| GTP-binding protein Era [Streptococcus sanguinis SK1057]
Length = 299
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPVDEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ M R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLMLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|313888957|ref|ZP_07822617.1| ribosome biogenesis GTPase Era [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845130|gb|EFR32531.1| ribosome biogenesis GTPase Era [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 301
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 152/256 (59%), Gaps = 2/256 (0%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ N KSGYV+V+G+PNVGKSTL N +IG+K+S +++KPQTTR I I + + Q+I
Sbjct: 2 TENNFKSGYVSVIGRPNVGKSTLLNAIIGEKISAISSKPQTTRQNITFIHTDEDAQIIFL 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI +K + L M+ + ++D I +VD K R + + + + ++K KLP
Sbjct: 62 DTPGI-QKPKNKLGEFMLTESKEGIEDSDVITYIVDTSKKIGRAERSIIDILKEYKGKLP 120
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
I+L++NK D I+ E+ + + Y + D++IP+SA GV+ + + L GP Y
Sbjct: 121 IILLINKVDTIRKDELLEIISMYAEEEIFDDIIPISAMKNDGVDIYLETLKKFLKPGPMY 180
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVE 347
YP+D++++ ERF V EIIREK + EVP+ +++ +K R + I I VE
Sbjct: 181 YPEDMITDKNERFIVAEIIREKGLIYLNEEVPHGLAISIEKFKKREDKNMYDIDANIYVE 240
Query: 348 KNSQKIILIGKVSPFL 363
+++ K ILIGK L
Sbjct: 241 RDTHKGILIGKNGSML 256
>gi|325295030|ref|YP_004281544.1| GTP-binding protein Era-like-protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065478|gb|ADY73485.1| GTP-binding protein Era-like-protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 306
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 160/253 (63%), Gaps = 13/253 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSGYVA+LG+PNVGKSTL N +G K++IVT+KPQTTRHRI+G+ + Q++ DTPGI
Sbjct: 9 KSGYVAILGRPNVGKSTLLNSFLGTKVAIVTDKPQTTRHRIIGVKHLKDAQIVFLDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGI--NADCIVVLVDACKAPERIDEILEEGVGDHKDK-LPIL 230
++K + M N + G+ +AD I+ L+DA +D+ + + +G+ K K ++
Sbjct: 69 HKEKFELNRYM---NEIAFGVIPDADIILFLIDARSGFTEVDKKILQKIGEEKRKDTKVI 125
Query: 231 LVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+V+NK D + E+ + E +++F V +++P+SA G ++ + D ++ LP GP YY
Sbjct: 126 VVINKIDGVPKEELLPLIDEIHKEFPFVSDIVPLSATRGTNLDRLLDLLVKYLPEGPKYY 185
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD----FIQVEIV 345
++++ P +V EIIREKI + R EVP+A V V++ +P KD I +IV
Sbjct: 186 EDHMLTDMPLEQYVAEIIREKIMLLTREEVPHAVTVQVLN--IQPGDKDPNMLVIDADIV 243
Query: 346 VEKNSQKIILIGK 358
VEK+SQK I+IGK
Sbjct: 244 VEKDSQKAIVIGK 256
>gi|237708021|ref|ZP_04538502.1| GTP-binding protein Era [Bacteroides sp. 9_1_42FAA]
gi|265754192|ref|ZP_06089381.1| GTP-binding protein Era [Bacteroides sp. 3_1_33FAA]
gi|345515929|ref|ZP_08795426.1| GTP-binding protein Era [Bacteroides dorei 5_1_36/D4]
gi|423229909|ref|ZP_17216314.1| GTP-binding protein Era [Bacteroides dorei CL02T00C15]
gi|423241562|ref|ZP_17222674.1| GTP-binding protein Era [Bacteroides dorei CL03T12C01]
gi|423246999|ref|ZP_17228050.1| GTP-binding protein Era [Bacteroides dorei CL02T12C06]
gi|229436559|gb|EEO46636.1| GTP-binding protein Era [Bacteroides dorei 5_1_36/D4]
gi|229458007|gb|EEO63728.1| GTP-binding protein Era [Bacteroides sp. 9_1_42FAA]
gi|263234901|gb|EEZ20456.1| GTP-binding protein Era [Bacteroides sp. 3_1_33FAA]
gi|392632700|gb|EIY26658.1| GTP-binding protein Era [Bacteroides dorei CL02T00C15]
gi|392633760|gb|EIY27698.1| GTP-binding protein Era [Bacteroides dorei CL02T12C06]
gi|392641148|gb|EIY34933.1| GTP-binding protein Era [Bacteroides dorei CL03T12C01]
Length = 293
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 153/248 (61%), Gaps = 9/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA ++AD ++ + D + ++ + +E+ K+P+LL+
Sbjct: 62 VVKPNYKLQESMLNFS-ESALVDADILLYVTDVVEKTDKNADFIEKV---RNVKVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL ++ K +E W+E+ E+IP+SA V+ + I LP P Y+ K
Sbjct: 118 INKIDLTNQEDLVKLVEAWHEQLPQA-EIIPISATSKFNVDTVMKRIRELLPDSPPYFGK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 350
D ++ P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ S
Sbjct: 177 DQWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVEHFK--EDAKSIHINAVIYVERES 234
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 235 QKGIIIGK 242
>gi|282878064|ref|ZP_06286869.1| GTP-binding protein Era [Prevotella buccalis ATCC 35310]
gi|281299804|gb|EFA92168.1| GTP-binding protein Era [Prevotella buccalis ATCC 35310]
Length = 293
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 149/246 (60%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M + M+ + SA +AD ++ + D + PE+ + LE+ +P++LV
Sbjct: 62 VLKPNYKMQEYMLAFS-ESALADADILLYVTDVVEDPEKNADFLEKV---RTMTIPVILV 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + +E + E++P+SA GV+ + I LP P Y+ KD
Sbjct: 118 INKIDASNQKTVGQLVEKWHALLPNAEILPISAANKFGVDMLLKRIQELLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
+++ P +FFV EIIREKI + Y E+PY+ +V V +K +AK I I VE+ SQ
Sbjct: 178 QLTDKPAKFFVSEIIREKILLYYDKEIPYSVEVRVEQFKE--SAKQIHINAVIYVERESQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KGIIIG 241
>gi|148380897|ref|YP_001255438.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 3502]
gi|153932263|ref|YP_001385205.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397]
gi|153936986|ref|YP_001388674.1| GTP-binding protein Era [Clostridium botulinum A str. Hall]
gi|226741172|sp|A7FXK1.1|ERA_CLOB1 RecName: Full=GTPase Era
gi|226741199|sp|A5I626.1|ERA_CLOBH RecName: Full=GTPase Era
gi|148290381|emb|CAL84508.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502]
gi|152928307|gb|ABS33807.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397]
gi|152932900|gb|ABS38399.1| GTP-binding protein Era [Clostridium botulinum A str. Hall]
Length = 296
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASEAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|421188898|ref|ZP_15646230.1| GTPase [Oenococcus oeni AWRIB419]
gi|399964231|gb|EJN98885.1| GTPase [Oenococcus oeni AWRIB419]
Length = 305
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 153/254 (60%), Gaps = 15/254 (5%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR++I GI + E Q++ DTPG
Sbjct: 5 YKSGFVAIIGRPNVGKSTLLNYIIGQKVTIISSKAQTTRNKIAGIYTTEEAQVVFLDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K + LD M K A AD + +VDA + D + E + K+ PI L+
Sbjct: 65 -IHKPYNSLDEYMEKASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKIKNT-PIYLL 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFT-------DVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
+NK DLIK KK + ++ + D EV P+SAK G V + D ++ KL G
Sbjct: 123 VNKIDLIK-----KKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIEKLHPG 177
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEI 344
P Y+ K+ +++HPERF V E+IREKI EVP++ V + S K + IQ I
Sbjct: 178 PQYFSKEQITDHPERFLVAELIREKILQLTEQEVPHSIAVVIDSMKKDGVNEKLHIQASI 237
Query: 345 VVEKNSQKIILIGK 358
VVE++SQK I+IGK
Sbjct: 238 VVERSSQKNIIIGK 251
>gi|392395105|ref|YP_006431707.1| GTP-binding protein Era [Desulfitobacterium dehalogenans ATCC
51507]
gi|390526183|gb|AFM01914.1| GTP-binding protein Era [Desulfitobacterium dehalogenans ATCC
51507]
Length = 303
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 157/259 (60%), Gaps = 6/259 (2%)
Query: 107 YASHPNH--KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 164
+ + PN +SG+V V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q
Sbjct: 2 HGAEPNKDFRSGFVTVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQ 61
Query: 165 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 224
++ DTPGI + K H L M+ + + D I+ +VD +E + E + +
Sbjct: 62 IVFLDTPGIHKPK-HKLGEFMVDSALESLREVDLILYMVDTTADFGAGEEYILENL--KQ 118
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K P +L+LNK DLI+ ++ K ++ Y D +IP+SAK G +++ I ++P
Sbjct: 119 VKTPCILLLNKIDLIEKDKLLKLIKDYSALKDFLAIIPISAKTGENKDELLKVIFKEMPQ 178
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP+D V++ PERF + E++REK+ R+EVP++ V V S + + T ++ I
Sbjct: 179 GPMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKKTLIK-VRALI 237
Query: 345 VVEKNSQKIILIGKVSPFL 363
VVE++SQK I+IG+ L
Sbjct: 238 VVERDSQKGIIIGQGGSLL 256
>gi|258647984|ref|ZP_05735453.1| GTP-binding protein Era [Prevotella tannerae ATCC 51259]
gi|260851825|gb|EEX71694.1| GTP-binding protein Era [Prevotella tannerae ATCC 51259]
Length = 293
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 149/246 (60%), Gaps = 9/246 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G PNVGKSTL N +G+++SI T K QTTRHRILGI + P+ Q+I DTPG+
Sbjct: 2 KSGFVNIVGNPNVGKSTLMNLFVGERISIATFKAQTTRHRILGIVNKPDAQIIFSDTPGV 61
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEE-GVGDHKDKLPILLV 232
++ M +M+ + SA +AD ++ + D + E+ E LE+ V + +P+L++
Sbjct: 62 LKPNYKMQKAMLTFS-ESALTDADILLYVTDVIEDQEKNKEFLEKVAVAN----VPVLVL 116
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL E+ + + +W E+ E+IP+SAK + + I LP GPAY+ K
Sbjct: 117 INKIDLSSQKEVEQLIKQWQERLPKA-EIIPLSAKAKFNTDTVLQRIEALLPEGPAYFEK 175
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D ++ RFFV EIIREKI + Y E+PY+ +V V +K K I I VE+ SQ
Sbjct: 176 DQWTDKSARFFVTEIIREKILLYYAKEIPYSVEVVVELFK-EDAKKIHINAVIYVERESQ 234
Query: 352 KIILIG 357
K I+IG
Sbjct: 235 KGIIIG 240
>gi|168181631|ref|ZP_02616295.1| GTP-binding protein Era [Clostridium botulinum Bf]
gi|237796398|ref|YP_002863950.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657]
gi|259645941|sp|C3L3F3.1|ERA_CLOB6 RecName: Full=GTPase Era
gi|182675144|gb|EDT87105.1| GTP-binding protein Era [Clostridium botulinum Bf]
gi|229262668|gb|ACQ53701.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657]
Length = 296
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|116491019|ref|YP_810563.1| GTPase [Oenococcus oeni PSU-1]
gi|290890500|ref|ZP_06553575.1| hypothetical protein AWRIB429_0965 [Oenococcus oeni AWRIB429]
gi|419758833|ref|ZP_14285145.1| GTPase [Oenococcus oeni AWRIB304]
gi|419857741|ref|ZP_14380444.1| GTPase [Oenococcus oeni AWRIB202]
gi|419859529|ref|ZP_14382183.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421185418|ref|ZP_15642829.1| GTPase [Oenococcus oeni AWRIB318]
gi|421189683|ref|ZP_15646997.1| GTPase [Oenococcus oeni AWRIB422]
gi|421190860|ref|ZP_15648144.1| GTPase [Oenococcus oeni AWRIB548]
gi|421193624|ref|ZP_15650870.1| GTPase [Oenococcus oeni AWRIB553]
gi|421195336|ref|ZP_15652544.1| GTPase [Oenococcus oeni AWRIB568]
gi|421197449|ref|ZP_15654624.1| GTPase [Oenococcus oeni AWRIB576]
gi|116091744|gb|ABJ56898.1| GTPase [Oenococcus oeni PSU-1]
gi|290479896|gb|EFD88545.1| hypothetical protein AWRIB429_0965 [Oenococcus oeni AWRIB429]
gi|399904288|gb|EJN91744.1| GTPase [Oenococcus oeni AWRIB304]
gi|399964599|gb|EJN99240.1| GTPase [Oenococcus oeni AWRIB318]
gi|399971783|gb|EJO06022.1| GTPase [Oenococcus oeni AWRIB553]
gi|399972773|gb|EJO06972.1| GTPase [Oenococcus oeni AWRIB422]
gi|399973556|gb|EJO07721.1| GTPase [Oenococcus oeni AWRIB548]
gi|399975058|gb|EJO09126.1| GTPase [Oenococcus oeni AWRIB576]
gi|399975761|gb|EJO09796.1| GTPase [Oenococcus oeni AWRIB568]
gi|410496546|gb|EKP88029.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497212|gb|EKP88687.1| GTPase [Oenococcus oeni AWRIB202]
Length = 305
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 153/254 (60%), Gaps = 15/254 (5%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR++I GI + E Q++ DTPG
Sbjct: 5 YKSGFVAIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQVVFLDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K + LD M K A AD + +VDA + D + E + K+ PI L+
Sbjct: 65 -IHKPYNSLDEYMEKASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKIKNT-PIYLL 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFT-------DVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
+NK DLIK KK + ++ + D EV P+SAK G V + D ++ KL G
Sbjct: 123 VNKIDLIK-----KKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIEKLHPG 177
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEI 344
P Y+ K+ +++HPERF V E+IREKI EVP++ V + S K + IQ I
Sbjct: 178 PQYFSKEQITDHPERFLVAELIREKILQLTEQEVPHSIAVVIDSMKKDGVNEKLHIQASI 237
Query: 345 VVEKNSQKIILIGK 358
VVE++SQK I+IGK
Sbjct: 238 VVERSSQKNIIIGK 251
>gi|449919893|ref|ZP_21798206.1| GTP-binding protein Era [Streptococcus mutans 1SM1]
gi|449159084|gb|EMB62463.1| GTP-binding protein Era [Streptococcus mutans 1SM1]
Length = 299
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + E++P+SA G+ V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMNFQEIVPISALQGNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V + S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVIDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|118586863|ref|ZP_01544297.1| GTP-binding protein Era [Oenococcus oeni ATCC BAA-1163]
gi|118432695|gb|EAV39427.1| GTP-binding protein Era [Oenococcus oeni ATCC BAA-1163]
Length = 309
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 153/254 (60%), Gaps = 15/254 (5%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR++I GI + E Q++ DTPG
Sbjct: 9 YKSGFVAIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQVVFLDTPG 68
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K + LD M K A AD + +VDA + D + E + K+ PI L+
Sbjct: 69 -IHKPYNSLDEYMEKASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKIKNT-PIYLL 126
Query: 233 LNKKDLIKPGEIAKKLEWYEKFT-------DVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
+NK DLIK KK + ++ + D EV P+SAK G V + D ++ KL G
Sbjct: 127 VNKIDLIK-----KKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIEKLHPG 181
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEI 344
P Y+ K+ +++HPERF V E+IREKI EVP++ V + S K + IQ I
Sbjct: 182 PQYFSKEQITDHPERFLVAELIREKILQLTEQEVPHSIAVVIDSMKKDGVNEKLHIQASI 241
Query: 345 VVEKNSQKIILIGK 358
VVE++SQK I+IGK
Sbjct: 242 VVERSSQKNIIIGK 255
>gi|160882377|ref|ZP_02063380.1| hypothetical protein BACOVA_00326 [Bacteroides ovatus ATCC 8483]
gi|237719051|ref|ZP_04549532.1| GTP-binding protein Era [Bacteroides sp. 2_2_4]
gi|299148135|ref|ZP_07041197.1| GTP-binding protein Era [Bacteroides sp. 3_1_23]
gi|336415766|ref|ZP_08596105.1| GTP-binding protein Era [Bacteroides ovatus 3_8_47FAA]
gi|383114089|ref|ZP_09934854.1| GTP-binding protein Era [Bacteroides sp. D2]
gi|423292359|ref|ZP_17270937.1| GTP-binding protein Era [Bacteroides ovatus CL02T12C04]
gi|423294534|ref|ZP_17272661.1| GTP-binding protein Era [Bacteroides ovatus CL03T12C18]
gi|156112190|gb|EDO13935.1| ribosome biogenesis GTPase Era [Bacteroides ovatus ATCC 8483]
gi|229451430|gb|EEO57221.1| GTP-binding protein Era [Bacteroides sp. 2_2_4]
gi|298512896|gb|EFI36783.1| GTP-binding protein Era [Bacteroides sp. 3_1_23]
gi|313694202|gb|EFS31037.1| GTP-binding protein Era [Bacteroides sp. D2]
gi|335940645|gb|EGN02512.1| GTP-binding protein Era [Bacteroides ovatus 3_8_47FAA]
gi|392661768|gb|EIY55341.1| GTP-binding protein Era [Bacteroides ovatus CL02T12C04]
gi|392675725|gb|EIY69166.1| GTP-binding protein Era [Bacteroides ovatus CL03T12C18]
Length = 293
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 155/246 (63%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEEWKELLPQAEIIPISATSKFNVDYVMKRIKELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K P K I+ I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEEP-KKIHIRAVINVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|170761539|ref|YP_001788258.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree]
gi|226741201|sp|B1KZM3.1|ERA_CLOBM RecName: Full=GTPase Era
gi|169408528|gb|ACA56939.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree]
Length = 296
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKRNEKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|293609825|ref|ZP_06692127.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024]
gi|427424847|ref|ZP_18914959.1| GTP-binding protein Era [Acinetobacter baumannii WC-136]
gi|292828277|gb|EFF86640.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024]
gi|425698164|gb|EKU67808.1| GTP-binding protein Era [Acinetobacter baumannii WC-136]
Length = 342
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 150/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ ++P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAYKWTQNDDLVLEKL---KNAEMPVIL 152
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFEDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRAGQKAIVIGE 291
>gi|406885304|gb|EKD32537.1| hypothetical protein ACD_77C00062G0001 [uncultured bacterium]
Length = 302
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 150/246 (60%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+++SIVT K QTTRHRI+GI +G +YQ++ DTPG
Sbjct: 11 HKSGFVNIIGNPNVGKSTLMNALVGERISIVTAKAQTTRHRIMGIVNGEDYQIVYSDTPG 70
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I+ K + L MM V +A +AD I+ + D + + +E +E+ ++ P++LV
Sbjct: 71 IL-KPSYRLQESMMNFVETAIGDADIILYVTDVVEQSTKNEEYIEKL---NRVSSPVILV 126
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D+ +I + +++ E+ P+SA + + + IL +P PA+Y KD
Sbjct: 127 INKIDISNQKDIEELYARWKELVPKAEIFPISATEKFNTDTLFNRILELIPESPAWYDKD 186
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
I+++ RFF EIIREKI + Y EVPY+ +V + ++ + I V ++SQK
Sbjct: 187 ILTDRNLRFFASEIIREKILLNYDKEVPYSTEVVIEMFQEEGGLYK-VDAVIYVMRDSQK 245
Query: 353 IILIGK 358
I+IGK
Sbjct: 246 GIIIGK 251
>gi|313205716|ref|YP_004044893.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|383485032|ref|YP_005393944.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|386322300|ref|YP_006018462.1| GTPase [Riemerella anatipestifer RA-GD]
gi|416111288|ref|ZP_11592545.1| GTP-binding protein Era [Riemerella anatipestifer RA-YM]
gi|442315109|ref|YP_007356412.1| GTPase [Riemerella anatipestifer RA-CH-2]
gi|312445032|gb|ADQ81387.1| GTP-binding protein Era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|315022889|gb|EFT35913.1| GTP-binding protein Era [Riemerella anatipestifer RA-YM]
gi|325336843|gb|ADZ13117.1| GTPase [Riemerella anatipestifer RA-GD]
gi|380459717|gb|AFD55401.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|441484032|gb|AGC40718.1| GTPase [Riemerella anatipestifer RA-CH-2]
Length = 291
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + P+ Q++ DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNQLMGEKLAIVTKKAQTTRHRIFGIYNEPDLQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC--KAPERIDEILEEGVGDHKDKLPIL 230
+++ K + L MM V+ + +AD + +VD AP E L E + +K +P+L
Sbjct: 62 VLDPK-YGLQEKMMDFVKDSLQDADVFLFIVDVTDKDAP---SEFLIEKL--NKIPVPVL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+++NK D E+ K + ++ + E++P+SA G + I + + LP P YY
Sbjct: 116 ILINKIDQTNQEELEKSMHFWHEQIPKAEILPISALEGFNTDVILPKLKSLLPENPPYYD 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
K+ ++ ERFFV E IREKI + Y E+PY+ +V +K + FI I VE++S
Sbjct: 176 KEQFTDKSERFFVNEAIREKILLNYEKEIPYSVEVVTEMFKEK-EGIIFIDSIIYVERDS 234
Query: 351 QKIILIG 357
QK ILIG
Sbjct: 235 QKGILIG 241
>gi|118580146|ref|YP_901396.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379]
gi|259645964|sp|A1APR8.1|ERA_PELPD RecName: Full=GTPase Era
gi|118502856|gb|ABK99338.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379]
Length = 296
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 155/256 (60%), Gaps = 14/256 (5%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++ GYV+++G+PNVGKSTL N++IG+K++I ++KPQTTR+RI GI + Q++ DTPG
Sbjct: 6 NRFGYVSIVGRPNVGKSTLLNRIIGEKIAITSDKPQTTRNRIQGIHNIANGQIVFIDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINA----DCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
I H S + K + A + A D ++++VDA A + D ++ + +G P
Sbjct: 66 I-----HACHSRLNKGMVDAALAALRGVDLLLLVVDAGGAID--DRLVRDVLGGTGT--P 116
Query: 229 ILLVLNKKDLIKPGEIA-KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
++LVLNK DL+ + +++ + + E++P+SA G GV+ + + + LP G
Sbjct: 117 VMLVLNKVDLLADKRVLLERMAAWSQLYPFREILPISAGSGEGVDGLIETVCGYLPEGQP 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
+P DI+++ PERF V E+IREKIF R+E+PY+ V V S+ RP I I +E
Sbjct: 177 LFPDDILTDLPERFIVAEMIREKIFRLTRDEIPYSTAVTVESFTERPNGVVAISAAICLE 236
Query: 348 KNSQKIILIGKVSPFL 363
+ +QK I+IGK L
Sbjct: 237 RPNQKGIIIGKKGEML 252
>gi|121534215|ref|ZP_01666040.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1]
gi|121307318|gb|EAX48235.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1]
Length = 298
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 148/252 (58%), Gaps = 17/252 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VAV+G+PNVGKSTL N ++GQK++I+++KPQTTR+RIL + + + Q++ DTPG
Sbjct: 7 YKSGFVAVIGRPNVGKSTLVNSLVGQKIAIMSDKPQTTRNRILCVLTLDDAQILFIDTPG 66
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KD 225
I + K H L M++ + D I+ +VDA E+G G+ K
Sbjct: 67 IHKPK-HRLGEYMVQAAETTLREVDVILFVVDATA---------EKGAGEQYILERLAKV 116
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
P++LV+NK D I ++ ++ Y + D V+P+SA ++ + D + L G
Sbjct: 117 ATPVILVVNKVDQIPKPQVLPIIDQYARSRDFAAVVPISALQKVNLDRLLDEVKKHLAPG 176
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP D+V++ PER + E+IREK R E+P+A V++ RP +I+ I
Sbjct: 177 PKYYPDDMVTDQPERLIIAELIREKALHLTREEIPHAIAVDIEEIVKRPNGDLYIRAVIY 236
Query: 346 VEKNSQKIILIG 357
VE++SQK I+IG
Sbjct: 237 VERDSQKGIIIG 248
>gi|375135606|ref|YP_004996256.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2]
gi|325123051|gb|ADY82574.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2]
Length = 340
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 150/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 34 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 93
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ ++P++L
Sbjct: 94 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAYKWTQNDDLVLEKL---KNAEMPVIL 150
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 151 VINKADTFEDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 210
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 211 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 270
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 271 IDATIFVDRAGQKAIVIGE 289
>gi|168179376|ref|ZP_02614040.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916]
gi|182669495|gb|EDT81471.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916]
Length = 296
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKAYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|407452635|ref|YP_006724360.1| GTPase [Riemerella anatipestifer RA-CH-1]
gi|403313619|gb|AFR36460.1| GTPase [Riemerella anatipestifer RA-CH-1]
Length = 291
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + P+ Q++ DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNQLMGEKLAIVTKKAQTTRHRIFGIYNEPDLQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC--KAPERIDEILEEGVGDHKDKLPIL 230
+++ K + L MM V+ + +AD + +VD AP E L E + +K +P+L
Sbjct: 62 VLDPK-YGLQEKMMDFVKDSLQDADVFLFIVDVTDKDAP---SEFLIEKL--NKIPVPVL 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+++NK D E+ K + ++ + E++P+SA G + I + + LP P YY
Sbjct: 116 ILINKIDQTNQEELEKLMHFWHEQIPKAEILPISALEGFNTDAILPKLKSLLPENPPYYD 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
K+ ++ ERFFV E IREKI + Y E+PY+ +V +K + FI I VE++S
Sbjct: 176 KEQFTDKSERFFVNEAIREKILLNYEKEIPYSVEVVTEMFKEK-EGIIFIDSIIYVERDS 234
Query: 351 QKIILIG 357
QK ILIG
Sbjct: 235 QKGILIG 241
>gi|170754569|ref|YP_001782578.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra]
gi|387819218|ref|YP_005679565.1| GTP-binding protein Era [Clostridium botulinum H04402 065]
gi|429246260|ref|ZP_19209597.1| GTPase Era [Clostridium botulinum CFSAN001628]
gi|226741200|sp|B1ILK9.1|ERA_CLOBK RecName: Full=GTPase Era
gi|169119781|gb|ACA43617.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra]
gi|322807262|emb|CBZ04836.1| GTP-binding protein Era [Clostridium botulinum H04402 065]
gi|428756720|gb|EKX79255.1| GTPase Era [Clostridium botulinum CFSAN001628]
Length = 296
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKTYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|421488515|ref|ZP_15935903.1| GTP-binding protein Era [Streptococcus oralis SK304]
gi|400367732|gb|EJP20747.1| GTP-binding protein Era [Streptococcus oralis SK304]
Length = 299
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKIHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|332522204|ref|ZP_08398456.1| ribosome biogenesis GTPase Era [Streptococcus porcinus str.
Jelinkova 176]
gi|332313468|gb|EGJ26453.1| ribosome biogenesis GTPase Era [Streptococcus porcinus str.
Jelinkova 176]
Length = 299
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + DE++ E + + K +P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDEMIMERLKNAK--IPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ + + + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALEGNNIPTLMSLLTDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEDTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|334128857|ref|ZP_08502736.1| GTP-binding protein Era [Centipeda periodontii DSM 2778]
gi|333386269|gb|EGK57487.1| GTP-binding protein Era [Centipeda periodontii DSM 2778]
Length = 298
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 149/251 (59%), Gaps = 3/251 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+ AV+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTPG
Sbjct: 4 HKSGFAAVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTEEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+ + K H L M K A D ++ +VD + P ++ + + + + + P+LL
Sbjct: 64 VHKPK-HKLGDYMAKATEGALHGVDVVIFVVDVTEKPGAGEQYILKQLANVR--APVLLA 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D I ++ L Y K D ++P+SA+ +E + I LP GP YYP D
Sbjct: 121 VNKVDCIPREKVLPILANYAKVYDFAGIVPISARAEENLEGLLAEIKKYLPEGPQYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+V++ PER V E++REK+ R+E+P+A V++ TRP +I+ I VE+ SQK
Sbjct: 181 MVTDQPERLIVAELVREKVLELTRDEIPHAVAVDIEEMTTRPKGDVYIRAVIYVERESQK 240
Query: 353 IILIGKVSPFL 363
I+IG L
Sbjct: 241 GIVIGARGALL 251
>gi|320547277|ref|ZP_08041569.1| GTP-binding protein Era [Streptococcus equinus ATCC 9812]
gi|320448081|gb|EFW88832.1| GTP-binding protein Era [Streptococcus equinus ATCC 9812]
Length = 298
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLINILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V V S K P T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVIVDSMKRDPETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKKGAML 250
>gi|89895851|ref|YP_519338.1| hypothetical protein DSY3105 [Desulfitobacterium hafniense Y51]
gi|89335299|dbj|BAE84894.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 303
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 154/253 (60%), Gaps = 6/253 (2%)
Query: 107 YASHPNH--KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 164
+ S PN +SG+V V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q
Sbjct: 2 HGSEPNRDFRSGFVTVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQ 61
Query: 165 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 224
++ DTPGI + K H L M+ + + D I+ +VD +E + E +
Sbjct: 62 IVFLDTPGIHKPK-HKLGEFMVDSALESLREVDLILYMVDTTAEFGAGEEYILENL--KH 118
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K P +L+LNK DLI+ ++ K ++ Y D ++P+SAK G +++ I ++P
Sbjct: 119 VKTPCILLLNKIDLIEKDKLLKLIKDYSALKDFLAILPISAKTGENKDELLKLIFKEMPQ 178
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP+D V++ PERF + E++REK+ R+EVP++ V V S + + T ++ I
Sbjct: 179 GPMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKKTLIK-VRALI 237
Query: 345 VVEKNSQKIILIG 357
VVE++SQK I+IG
Sbjct: 238 VVERDSQKGIIIG 250
>gi|340778699|ref|ZP_08698642.1| GTPase Era [Acetobacter aceti NBRC 14818]
Length = 299
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 137/245 (55%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+ A++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q+++ DTPGI
Sbjct: 6 RCGFAALVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILIRHATQILIVDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K LD M+ S +AD ++L+DA + + E + + + LVL
Sbjct: 66 FRPK-RKLDRAMVAAAWSGSEDADVTLLLIDAKSGLDDATTAVIEQLAKAGRR--VWLVL 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ P + + V+ V +SA+ G+GV+D+ D + LPLGP YP+D
Sbjct: 123 NKTDLVTPQSLLPLTAAVAEMIPVEHVFMISARTGNGVDDLLDRLAESLPLGPFLYPEDD 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R E++RE+IF+Q EVPY V S+ RP I V + V + S K
Sbjct: 183 MTDLPDRLLAAELVREQIFLQTHEEVPYGATVETESFVERPDGSVRIDVTVYVGRASHKA 242
Query: 354 ILIGK 358
ILIG+
Sbjct: 243 ILIGE 247
>gi|387783710|ref|YP_006069793.1| GTP-binding protein [Streptococcus salivarius JIM8777]
gi|338744592|emb|CCB94958.1| GTP-binding protein [Streptococcus salivarius JIM8777]
Length = 299
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++E + D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIEDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDEMKRDEDTDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKQGSML 251
>gi|410096036|ref|ZP_11291027.1| GTP-binding protein Era [Parabacteroides goldsteinii CL02T12C30]
gi|409227442|gb|EKN20340.1| GTP-binding protein Era [Parabacteroides goldsteinii CL02T12C30]
Length = 296
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 153/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + + G +AD ++ + D + ++ +E L+ + P+LL+
Sbjct: 65 VLHPNYKLQESMLNFSESALG-DADVLLYVTDVVETIDKNEEFLQRV---QSVECPVLLL 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDTSNQAELEKMVAHWKEVLPKAEIIPISALSNFNIDYVKHRVEDLMPESPPYFEKD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE++SQK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEEEEMIH-IKALIIVERDSQK 239
Query: 353 IILIG 357
I+IG
Sbjct: 240 GIIIG 244
>gi|60683340|ref|YP_213484.1| GTP-binding protein Era [Bacteroides fragilis NCTC 9343]
gi|375360148|ref|YP_005112920.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis 638R]
gi|60494774|emb|CAH09580.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis NCTC 9343]
gi|301164829|emb|CBW24389.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis 638R]
Length = 305
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 14 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 73
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +++ + PILL+
Sbjct: 74 VLKPNYKLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQSAPILLL 129
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 130 INKIDLTDQEKLVKLVEEWKELLPQAEIIPISAATKFNVDYVMKRIKDLLPDSPPYFDKD 189
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 190 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEEFK-EDAKKIHIHAVIYVERDSQK 248
Query: 353 IILIGK 358
I+IGK
Sbjct: 249 GIIIGK 254
>gi|400289799|ref|ZP_10791826.1| GTP-binding protein Era [Streptococcus ratti FA-1 = DSM 20564]
gi|399920590|gb|EJN93407.1| GTP-binding protein Era [Streptococcus ratti FA-1 = DSM 20564]
Length = 298
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTKTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D ++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEERGKGDNMIMERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +K+E + D E++P+SA G+ VE + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEKIEDFRSQMDFKEIVPISALQGNNVETLMTILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|265767859|ref|ZP_06095391.1| GTP-binding protein Era [Bacteroides sp. 2_1_16]
gi|336412106|ref|ZP_08592564.1| GTP-binding protein Era [Bacteroides sp. 2_1_56FAA]
gi|383119925|ref|ZP_09940662.1| GTP-binding protein Era [Bacteroides sp. 3_2_5]
gi|423252219|ref|ZP_17233221.1| GTP-binding protein Era [Bacteroides fragilis CL03T00C08]
gi|423252539|ref|ZP_17233470.1| GTP-binding protein Era [Bacteroides fragilis CL03T12C07]
gi|423261233|ref|ZP_17242134.1| GTP-binding protein Era [Bacteroides fragilis CL07T00C01]
gi|423267758|ref|ZP_17246738.1| GTP-binding protein Era [Bacteroides fragilis CL07T12C05]
gi|423272333|ref|ZP_17251301.1| GTP-binding protein Era [Bacteroides fragilis CL05T00C42]
gi|423276789|ref|ZP_17255721.1| GTP-binding protein Era [Bacteroides fragilis CL05T12C13]
gi|423283045|ref|ZP_17261930.1| GTP-binding protein Era [Bacteroides fragilis HMW 615]
gi|251944092|gb|EES84611.1| GTP-binding protein Era [Bacteroides sp. 3_2_5]
gi|263252531|gb|EEZ24059.1| GTP-binding protein Era [Bacteroides sp. 2_1_16]
gi|335939278|gb|EGN01155.1| GTP-binding protein Era [Bacteroides sp. 2_1_56FAA]
gi|387774385|gb|EIK36497.1| GTP-binding protein Era [Bacteroides fragilis CL07T00C01]
gi|392647831|gb|EIY41528.1| GTP-binding protein Era [Bacteroides fragilis CL03T00C08]
gi|392660615|gb|EIY54224.1| GTP-binding protein Era [Bacteroides fragilis CL03T12C07]
gi|392695525|gb|EIY88737.1| GTP-binding protein Era [Bacteroides fragilis CL05T00C42]
gi|392696001|gb|EIY89205.1| GTP-binding protein Era [Bacteroides fragilis CL05T12C13]
gi|392696017|gb|EIY89219.1| GTP-binding protein Era [Bacteroides fragilis CL07T12C05]
gi|404581319|gb|EKA86018.1| GTP-binding protein Era [Bacteroides fragilis HMW 615]
Length = 293
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +++ + PILL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQSAPILLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEEWKELLPQAEIIPISAATKFNVDYVMKRIKDLLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEEFK-EDAKKIHIHAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|298480162|ref|ZP_06998360.1| GTP-binding protein Era [Bacteroides sp. D22]
gi|298273443|gb|EFI15006.1| GTP-binding protein Era [Bacteroides sp. D22]
Length = 293
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 155/246 (63%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEDWKELLPQAEIIPISATSKFNVDYVMKRIKELLPNSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K P K I+ I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEEP-KKIHIRAVINVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|219670281|ref|YP_002460716.1| GTP-binding protein Era [Desulfitobacterium hafniense DCB-2]
gi|219540541|gb|ACL22280.1| GTP-binding protein Era [Desulfitobacterium hafniense DCB-2]
Length = 303
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 154/253 (60%), Gaps = 6/253 (2%)
Query: 107 YASHPNH--KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 164
+ S PN +SG+V V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q
Sbjct: 2 HGSEPNRDFRSGFVTVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQ 61
Query: 165 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 224
++ DTPGI + K H L M+ + + D I+ +VD +E + E +
Sbjct: 62 VVFLDTPGIHKPK-HKLGEFMVDSALESLREVDLILYMVDTTAEFGAGEEYILENL--KH 118
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
K P +L+LNK DLI+ ++ K ++ Y D ++P+SAK G +++ I ++P
Sbjct: 119 VKTPCILLLNKIDLIEKDKLLKLIKDYSALKDFLAILPISAKTGENKDELLKLIFKEMPQ 178
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP+D V++ PERF + E++REK+ R+EVP++ V V S + + T ++ I
Sbjct: 179 GPMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVVVESVEEKKTLIK-VRALI 237
Query: 345 VVEKNSQKIILIG 357
VVE++SQK I+IG
Sbjct: 238 VVERDSQKGIIIG 250
>gi|335429386|ref|ZP_08556284.1| GTPase Era [Haloplasma contractile SSD-17B]
gi|334889396|gb|EGM27681.1| GTPase Era [Haloplasma contractile SSD-17B]
Length = 308
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 155/252 (61%), Gaps = 6/252 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKST NQ++GQK++I+++K QTTR++I G+ + + Q I DTPGI
Sbjct: 13 KSGFITIVGRPNVGKSTFLNQVLGQKIAIMSDKAQTTRNKIQGVYTTDDAQYIFVDTPGI 72
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L + M K + D ++ +V+A + D + E + + K P+LLV+
Sbjct: 73 HKPK-HKLGTFMTKIALNTLNQVDLVLFMVNAEQKIGPGDRFIIEHLKNVKQ--PVLLVI 129
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D+I ++ + + Y K D E++P+SA G V + I + L GP YYP D
Sbjct: 130 NKIDMIPKEQLLEIMAAYHKEFDFAEIVPISALTGENVSTLLGTIHSYLEEGPKYYPDDQ 189
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQ 351
V++HPERF + E+IREK+ ++ R E+P++ V ++ ++ KD I V+ I+VE+ SQ
Sbjct: 190 VTDHPERFIISELIREKVLVKTREEIPHSVAV-IIDDISKEEGKDIIDVQASIIVERPSQ 248
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 249 KGIVIGKNGSML 260
>gi|333368328|ref|ZP_08460535.1| GTP-binding protein Era [Psychrobacter sp. 1501(2011)]
gi|332977455|gb|EGK14230.1| GTP-binding protein Era [Psychrobacter sp. 1501(2011)]
Length = 338
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 154/267 (57%), Gaps = 18/267 (6%)
Query: 105 FDYASHP-NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY 163
F+ S P ++++GYVA++G+PNVGKSTL N M+GQKLSI + KPQTTRHRI GI S E
Sbjct: 27 FNEESLPEDYRAGYVAIVGRPNVGKSTLMNHMLGQKLSITSRKPQTTRHRIHGILSNSEM 86
Query: 164 QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE-EGVGD 222
Q + DTPGI ++ +++ M K SA ++ D ++ +VD + E D++L E +G+
Sbjct: 87 QAVFVDTPGIHSNEVRLINERMNKAAFSALVDVDLVLFVVDGEQWRE--DDLLTLEKIGE 144
Query: 223 HKDKLPILLVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
P++LV+NK D IK G I +E Y + + +++PVSA +E + I +
Sbjct: 145 --TDTPVVLVINKADTIKDKGSILPLIETYHENFEFADIVPVSALKNQNLERLEQVIRSH 202
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD--- 338
LP G Y + +++ ERF EIIREKI Q +EVPY V + +K P D
Sbjct: 203 LPQGAPIYDTEQITDRSERFLASEIIREKIMRQSGDEVPYDLTVQIDEFKDEPAHIDPKT 262
Query: 339 --------FIQVEIVVEKNSQKIILIG 357
FI I VE+N QK I+IG
Sbjct: 263 GRKRKAVTFIDATIFVERNGQKAIIIG 289
>gi|449929259|ref|ZP_21801489.1| GTP-binding protein Era [Streptococcus mutans 3SN1]
gi|449164726|gb|EMB67771.1| GTP-binding protein Era [Streptococcus mutans 3SN1]
Length = 299
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA + V + D ++ L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQDNNVSHLVDLLVDHLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + R E+P++ V V S + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLLLTREEIPHSVAVVVDSMARDEETHKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKKGAML 251
>gi|417850220|ref|ZP_12496134.1| GTP-binding protein Era [Streptococcus mitis SK1080]
gi|339455063|gb|EGP67674.1| GTP-binding protein Era [Streptococcus mitis SK1080]
Length = 299
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHICATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|53715372|ref|YP_101364.1| GTP-binding protein Era [Bacteroides fragilis YCH46]
gi|52218237|dbj|BAD50830.1| putative GTP-binding protein [Bacteroides fragilis YCH46]
Length = 293
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 152/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +++ + PILL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALADADVLLYVTDVIETPDKNNEFIQKV---RQQSAPILLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEGWKELLPQAEIIPISAATKFNVDYVMKRIKDLLPDSPPYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEEFK-EDAKKIHIHAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|237756325|ref|ZP_04584877.1| GTP-binding protein Era [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691511|gb|EEP60567.1| GTP-binding protein Era [Sulfurihydrogenibium yellowstonense SS-5]
Length = 307
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 158/260 (60%), Gaps = 4/260 (1%)
Query: 106 DYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 165
++ ++ N ++G+VA++G+PNVGKSTL N +IG KLSIV+ +PQTTR RILG+ P+ Q+
Sbjct: 3 NFQNYENFRAGFVAIVGRPNVGKSTLLNNIIGTKLSIVSPRPQTTRMRILGVKHLPDAQI 62
Query: 166 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 225
I DTPG ++K +L +M++V S +AD I++++DA + D+ + E +
Sbjct: 63 IFLDTPG-VQKGGDLLTKSVMESVVSGIESADVILMVIDAEAGWTKEDKEIVENYLKKVN 121
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P +L +NK D IK + +E K D E +P+SA ++++ + I LP
Sbjct: 122 K-PAILAINKIDKIKRDLVLPLIEESTKIYDFKEFVPISAIKNLNIDELIETIKKYLPES 180
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YP+D +++ P +F++ EIIREK+F+ R EVPY+ V V S K K+ + ++ V
Sbjct: 181 PPLYPEDQITDLPLKFYIAEIIREKVFLNTRQEVPYSVAVEVESIKEGEKNKNLLIIDAV 240
Query: 346 --VEKNSQKIILIGKVSPFL 363
VEK + K I+IGK L
Sbjct: 241 IYVEKENHKGIIIGKQGQML 260
>gi|187778474|ref|ZP_02994947.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC
15579]
gi|226950371|ref|YP_002805462.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto]
gi|254783292|sp|C1FVS6.1|ERA_CLOBJ RecName: Full=GTPase Era
gi|187772099|gb|EDU35901.1| ribosome biogenesis GTPase Era [Clostridium sporogenes ATCC 15579]
gi|226842790|gb|ACO85456.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto]
Length = 296
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 147/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + + E+IP+SA G V+ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKTYSELMEFQEIIPISALKGKNVDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|417935679|ref|ZP_12578996.1| GTP-binding protein Era [Streptococcus infantis X]
gi|343402588|gb|EGV15093.1| GTP-binding protein Era [Streptococcus infantis X]
Length = 299
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q+I DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIIFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|262408119|ref|ZP_06084666.1| GTP-binding protein Era [Bacteroides sp. 2_1_22]
gi|293369491|ref|ZP_06616070.1| GTP-binding protein Era [Bacteroides ovatus SD CMC 3f]
gi|294644224|ref|ZP_06721994.1| GTP-binding protein Era [Bacteroides ovatus SD CC 2a]
gi|294808598|ref|ZP_06767338.1| GTP-binding protein Era [Bacteroides xylanisolvens SD CC 1b]
gi|336403749|ref|ZP_08584458.1| GTP-binding protein Era [Bacteroides sp. 1_1_30]
gi|345508909|ref|ZP_08788527.1| GTP-binding protein Era [Bacteroides sp. D1]
gi|423211943|ref|ZP_17198472.1| GTP-binding protein Era [Bacteroides xylanisolvens CL03T12C04]
gi|229447221|gb|EEO53012.1| GTP-binding protein Era [Bacteroides sp. D1]
gi|262353671|gb|EEZ02764.1| GTP-binding protein Era [Bacteroides sp. 2_1_22]
gi|292635376|gb|EFF53889.1| GTP-binding protein Era [Bacteroides ovatus SD CMC 3f]
gi|292640434|gb|EFF58682.1| GTP-binding protein Era [Bacteroides ovatus SD CC 2a]
gi|294444197|gb|EFG12924.1| GTP-binding protein Era [Bacteroides xylanisolvens SD CC 1b]
gi|295088053|emb|CBK69576.1| GTP-binding protein Era [Bacteroides xylanisolvens XB1A]
gi|335945103|gb|EGN06919.1| GTP-binding protein Era [Bacteroides sp. 1_1_30]
gi|392695307|gb|EIY88530.1| GTP-binding protein Era [Bacteroides xylanisolvens CL03T12C04]
Length = 293
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 155/246 (63%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + E Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDEMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +E+ + +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADILLYVTDVVETPDKNNEFMEKV---RQMTVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLVKLVEDWKELLPQAEIIPISATSKFNVDYVMKRIKELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K P K I+ I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEEP-KKIHIRAVINVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|407796185|ref|ZP_11143141.1| GTP-binding protein Era [Salimicrobium sp. MJ3]
gi|407019539|gb|EKE32255.1| GTP-binding protein Era [Salimicrobium sp. MJ3]
Length = 300
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+ A++G+PNVGKST N++IG+K++I+++K QTTR+RI G+ + + Q++ DTPGI
Sbjct: 6 KSGFTAIVGRPNVGKSTFMNRVIGEKIAIMSDKAQTTRNRIQGVYTDEDSQIVFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L + M+ D I+ +++A + R D+ + + + + D+ P+ L++
Sbjct: 66 HKPK-HKLGNYMVNTAEQTLNEVDIILFMINAEEGYGRGDQFIVDRLKN-VDR-PVYLII 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +E Y + + E++P+SA G+ V+ + I L GP YYP+D
Sbjct: 123 NKIDRVHPDKLITLIEQYRELMEFTEIVPISALEGNNVDHLLTVIKGHLEEGPQYYPEDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++HPERF + E IREK+ R E+P++ V + IQ IVVE+ SQK
Sbjct: 183 ITDHPERFVISEFIREKVLHLTREEIPHSIAVKIEEIDEEENGSLHIQAIIVVERKSQKG 242
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 243 IIIGKQGSML 252
>gi|383937508|ref|ZP_09990764.1| GTP-binding protein Era [Streptococcus pseudopneumoniae SK674]
gi|418969048|ref|ZP_13520206.1| GTP-binding protein Era [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383352473|gb|EID30169.1| GTP-binding protein Era [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383715595|gb|EID71545.1| GTP-binding protein Era [Streptococcus pseudopneumoniae SK674]
Length = 299
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KATKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQIDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDCMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|212690522|ref|ZP_03298650.1| hypothetical protein BACDOR_00004 [Bacteroides dorei DSM 17855]
gi|212666871|gb|EEB27443.1| ribosome biogenesis GTPase Era [Bacteroides dorei DSM 17855]
Length = 293
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 153/248 (61%), Gaps = 9/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA ++AD ++ + D + ++ + +E+ K+P+LL+
Sbjct: 62 VVKPNYKLQESMLNFS-ESALVDADILLYVTDVVEKTDKNVDFIEKV---RNVKVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL ++ K +E W+E+ E+IP+SA V+ + I LP P Y+ K
Sbjct: 118 INKIDLTNQEDLVKLVEAWHEQLPQA-EIIPISATSKFNVDTVMKRIRELLPDSPPYFGK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNS 350
D ++ P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ S
Sbjct: 177 DQWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVEHFK--EDAKSIHINAVIYVERES 234
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 235 QKGIIIGK 242
>gi|153941135|ref|YP_001392222.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland]
gi|384463203|ref|YP_005675798.1| GTP-binding protein Era [Clostridium botulinum F str. 230613]
gi|189037261|sp|A7GHG2.1|ERA_CLOBL RecName: Full=GTPase Era
gi|152937031|gb|ABS42529.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland]
gi|295320220|gb|ADG00598.1| GTP-binding protein Era [Clostridium botulinum F str. 230613]
Length = 296
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++ +KLSIV+ +PQTTR+ I I + YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K+ A + D ++ L++ + P R D + E + + K +P+ LVL
Sbjct: 63 HKPK-HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK--VPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D ++A+ L+ Y + + +E+IP+SA G ++ +++ + +P GP YYP+D+
Sbjct: 120 NKIDENPQEKVAETLKIYSELMEFEEIIPISALKGKNIDLLKELMFKYIPEGPQYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+ + ERF V EI+REK EVP+ V ++ K I+ I+ EKNS K
Sbjct: 180 IIDQNERFIVAEIVREKALRLLSEEVPHGIAVEILQMKKNEKGTYHIEGNILCEKNSHKP 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>gi|395244614|ref|ZP_10421575.1| GTP-binding protein Era [Lactobacillus hominis CRBIP 24.179]
gi|394483115|emb|CCI82583.1| GTP-binding protein Era [Lactobacillus hominis CRBIP 24.179]
Length = 300
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 152/257 (59%), Gaps = 18/257 (7%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I++ +PQTTR++I G+ + Q++ DTPGI
Sbjct: 6 KSGFVALIGRPNVGKSTLLNYLVGQKVAIMSPQPQTTRNKISGVYTDDHEQIVFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 226
+ K + LD M K+ SA D ++ +V+ KA G GDH K K
Sbjct: 66 HKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEKA----------GKGDHYIADLLKKIK 114
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+ LV+NK D I P ++ + ++ Y++ D E++P+SA G+ V+++ I LP+GP
Sbjct: 115 KPVFLVINKIDTIHPDKLLEIIDSYKELGDFTEIVPISASQGNNVDELIKTITKYLPVGP 174
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
+Y D +++ PE F V E+IRE++ EVP+A V V + K I+ I V
Sbjct: 175 QFYDADQITDRPEYFIVAELIREQVLRLTHEEVPHATAVVVDRMRDHENGKLQIEATIYV 234
Query: 347 EKNSQKIILIGKVSPFL 363
E++ QK I+IGK L
Sbjct: 235 ERDGQKGIVIGKRGSML 251
>gi|401683636|ref|ZP_10815522.1| GTP-binding protein Era [Streptococcus sp. BS35b]
gi|418974874|ref|ZP_13522783.1| GTP-binding protein Era [Streptococcus oralis SK1074]
gi|383348245|gb|EID26204.1| GTP-binding protein Era [Streptococcus oralis SK1074]
gi|400187714|gb|EJO21908.1| GTP-binding protein Era [Streptococcus sp. BS35b]
Length = 299
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|242060264|ref|XP_002451421.1| hypothetical protein SORBIDRAFT_04g001843 [Sorghum bicolor]
gi|241931252|gb|EES04397.1| hypothetical protein SORBIDRAFT_04g001843 [Sorghum bicolor]
Length = 120
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 100/112 (89%), Gaps = 4/112 (3%)
Query: 196 ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFT 255
ADC++V+ DACKAPE+IDE+LEEGVG+ LP+LLVLNKKDLIKPGEIAKKL+WY+KFT
Sbjct: 1 ADCVLVVADACKAPEKIDEMLEEGVGNKDIGLPVLLVLNKKDLIKPGEIAKKLDWYQKFT 60
Query: 256 DVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV----SEHPERFFV 303
+VD+VIP+SAK+G+GV+DI++WIL+KLPLGPAYYPK+IV SEH ++F
Sbjct: 61 NVDDVIPISAKFGNGVDDIKEWILSKLPLGPAYYPKEIVRFRRSEHFSKYFC 112
>gi|86134519|ref|ZP_01053101.1| GTP-binding protein Era [Polaribacter sp. MED152]
gi|85821382|gb|EAQ42529.1| GTP-binding protein Era [Polaribacter sp. MED152]
Length = 293
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+KLSI+T K QTTRHRILGI + EYQ+I DTPG
Sbjct: 3 HKAGFVNIIGNPNVGKSTLMNALVGEKLSIITPKAQTTRHRILGIVNHEEYQIIFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II K + L + MM V+SA +AD ++ +V+ + + + + + K+P++L+
Sbjct: 63 II-KPAYELQASMMDFVKSAFEDADVLIYMVEVGETALKNEAFFNKII---HSKIPVILL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D E+ +K+ ++ + V +SA V+ + I+ LP P +YPKD
Sbjct: 119 LNKIDKSNKEEVDEKIAYWREKVPNSFVYVISALERFNVDAVFYKIIELLPESPPFYPKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ ERFFV E IREKI Y+ E+PY+ +V S+ I+ I+VE+++QK
Sbjct: 179 QLTDKNERFFVNEKIREKILTHYKKEIPYSVEVETESFIEEENIVR-IRSIIMVERDTQK 237
Query: 353 IILIG 357
I+IG
Sbjct: 238 GIIIG 242
>gi|298291622|ref|YP_003693561.1| GTP-binding protein Era [Starkeya novella DSM 506]
gi|296928133|gb|ADH88942.1| GTP-binding protein Era [Starkeya novella DSM 506]
Length = 304
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 143/247 (57%), Gaps = 3/247 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ + G+VA++G PN GKSTL N ++G K+SIV++K QTTR + GI Q+IL DTP
Sbjct: 7 DTRCGFVALIGAPNAGKSTLTNALVGTKVSIVSHKVQTTRSLVRGIALEGTTQIILVDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L+ M+++ S +AD +V+LVDA E + +G+ D K P +
Sbjct: 67 GIFAPK-RRLEKAMVRSAWSGAGDADAVVLLVDARAGMTEDVEAIIKGLADVKR--PRAI 123
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DL+K + + + D + VSA+ G G++++R+W+ LPLGP YP+
Sbjct: 124 LLNKIDLVKRDSLLELAAKVAELISFDRLFMVSAQNGDGLKELREWLAQTLPLGPWLYPE 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +S+ P R EI REK+F + E+PY V S++ R I+ I VE+ SQ
Sbjct: 184 DQISDAPMRSLAAEITREKLFHRLHEELPYRSTVETDSWQERKDGSVRIEQTIFVERESQ 243
Query: 352 KIILIGK 358
+ I++GK
Sbjct: 244 RKIVLGK 250
>gi|427717662|ref|YP_007065656.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 7507]
gi|427350098|gb|AFY32822.1| GTP-binding protein Era-like-protein [Calothrix sp. PCC 7507]
Length = 324
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 154/261 (59%), Gaps = 29/261 (11%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG++ ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DT
Sbjct: 28 PEFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGILTTPEAQLIFVDT 87
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDK 226
PG I K H L +++KN + A + D ++ +VD AC +R I E+L + +
Sbjct: 88 PG-IHKPHHQLGEVLVKNAKIAIESVDVLLFVVDGTVACGTGDRFIAELLS------RSQ 140
Query: 227 LPILLVLNKKDLIKP---------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDW 277
P++L LNK D P ++A+ +W + + SAK G G+ ++++
Sbjct: 141 TPVILGLNKIDQQPPDSQPIDDSYAQLAESHQW--------QTVKFSAKTGTGLPELQEL 192
Query: 278 ILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK 337
+ L GP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + + P+
Sbjct: 193 LTEHLEQGPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEETPSIT 252
Query: 338 DFIQVEIVVEKNSQKIILIGK 358
+ I VE++SQK ILIGK
Sbjct: 253 RVL-ATINVERDSQKGILIGK 272
>gi|312864794|ref|ZP_07725025.1| ribosome biogenesis GTPase Era [Streptococcus downei F0415]
gi|311099921|gb|EFQ58134.1| ribosome biogenesis GTPase Era [Streptococcus downei F0415]
Length = 321
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 26 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGI 85
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D ++ E + K+P++LV+
Sbjct: 86 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEERGKGDNMIMERL--KAAKIPVILVI 142
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +K++ + D E++P+SA G+ +E + + L G Y+P+D
Sbjct: 143 NKIDQVHPDQLLEKIDDFRSQMDFKEIVPISALQGNNIETLMMILKDNLEEGYQYFPEDQ 202
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + + EVP++ V + S K T K I+ I+VE++SQK
Sbjct: 203 ITDHPERFLVSEMIREKVLLLTQQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 262
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 263 GIIIGKKGSML 273
>gi|270292907|ref|ZP_06199118.1| GTP-binding protein Era [Streptococcus sp. M143]
gi|270278886|gb|EFA24732.1| GTP-binding protein Era [Streptococcus sp. M143]
Length = 299
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGTML 251
>gi|260551499|ref|ZP_05825683.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. RUH2624]
gi|424054690|ref|ZP_17792214.1| GTP-binding protein Era [Acinetobacter nosocomialis Ab22222]
gi|425740715|ref|ZP_18858883.1| GTP-binding protein Era [Acinetobacter baumannii WC-487]
gi|445436624|ref|ZP_21440629.1| GTP-binding protein Era [Acinetobacter baumannii OIFC021]
gi|260405493|gb|EEW98986.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. RUH2624]
gi|407439439|gb|EKF45964.1| GTP-binding protein Era [Acinetobacter nosocomialis Ab22222]
gi|425494738|gb|EKU60937.1| GTP-binding protein Era [Acinetobacter baumannii WC-487]
gi|444754623|gb|ELW79236.1| GTP-binding protein Era [Acinetobacter baumannii OIFC021]
Length = 342
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 150/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ ++P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAYKWTQNDDLVLEKL---KNAEMPVIL 152
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFEDKREILPLIQERTKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKNGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|148652187|ref|YP_001279280.1| GTP-binding protein Era [Psychrobacter sp. PRwf-1]
gi|148571271|gb|ABQ93330.1| GTP-binding protein Era [Psychrobacter sp. PRwf-1]
Length = 339
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 162/284 (57%), Gaps = 22/284 (7%)
Query: 90 PDRNMASPDDYEIEEF---DYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNK 146
P+ N+ + D ++ F D A ++++GYVA++G+PNVGKSTL N M+GQKLSI + K
Sbjct: 13 PETNLGT--DNLLDSFFGDDNALPEDYRAGYVAIVGRPNVGKSTLMNHMLGQKLSITSRK 70
Query: 147 PQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC 206
PQTTRHRI GI S + Q + DTPGI ++ +++ M K SA ++ D ++ +VD
Sbjct: 71 PQTTRHRIHGILSHEDMQAVFVDTPGIHSNEVRLINERMNKAAFSALVDVDLVLFVVDGD 130
Query: 207 KAPERIDEILE-EGVGDHKDKLPILLVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVS 264
+ E D++L E +G+ P++LV+NK D IK G I +E Y + D +++PVS
Sbjct: 131 QWRE--DDLLTLEKIGET--DTPVVLVINKADTIKDKGSILPLIETYHENFDFADIVPVS 186
Query: 265 AKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQ 324
A +E ++ I + LP G Y + +++ ERF EIIREKI Q +EVPY
Sbjct: 187 ALKNQNLERLQQVIRSHLPQGAPIYDTEQITDRSERFLASEIIREKIMRQSGDEVPYDLT 246
Query: 325 VNVVSYKTRPTAKD-----------FIQVEIVVEKNSQKIILIG 357
V + +K P D FI I VE+N QK I+IG
Sbjct: 247 VQIDEFKDEPAHIDPKTGRKRKAVTFIDATIFVERNGQKAIIIG 290
>gi|331266548|ref|YP_004326178.1| GTPase/GTP-binding protein Era [Streptococcus oralis Uo5]
gi|419782800|ref|ZP_14308598.1| GTP-binding protein Era [Streptococcus oralis SK610]
gi|326683220|emb|CBZ00838.1| GTPase/GTP-binding protein Era [Streptococcus oralis Uo5]
gi|383183013|gb|EIC75561.1| GTP-binding protein Era [Streptococcus oralis SK610]
Length = 299
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|443312359|ref|ZP_21041977.1| GTP-binding protein Era [Synechocystis sp. PCC 7509]
gi|442777597|gb|ELR87872.1| GTP-binding protein Era [Synechocystis sp. PCC 7509]
Length = 324
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 155/263 (58%), Gaps = 22/263 (8%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG++ ++G+PNVGKSTL N ++GQK++I + QTTR+R+ GI + PE Q+I DT
Sbjct: 27 PGFKSGFIGIIGRPNVGKSTLMNYLVGQKIAITSPVAQTTRNRLRGILTTPEAQLIFVDT 86
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------- 223
PG I K H L ++++N R A + D ++ +VD +E G GD
Sbjct: 87 PG-IHKPHHQLGEVLVQNARIAIDSVDVVLFVVDGG---------VEAGGGDRYIVDILS 136
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLE-WYEKFTDVD--EVIPVSAKYGHGVEDIRDWILT 280
+ + P++L +NK D +P + A+ L+ Y + + + +++ SA G G+ D++ ++
Sbjct: 137 QSQTPVILGINKID-TQPADDAQMLDTTYARVAEANNWKMVKFSALTGDGLVDLQQLLVE 195
Query: 281 KLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFI 340
KL LGP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + PT
Sbjct: 196 KLELGPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIEKVVEEPTITRVF 255
Query: 341 QVEIVVEKNSQKIILIGKVSPFL 363
I +E++SQK ILIGK L
Sbjct: 256 -AAINIERDSQKGILIGKGGSML 277
>gi|366089214|ref|ZP_09455687.1| GTPase Era [Lactobacillus acidipiscis KCTC 13900]
Length = 300
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 145/237 (61%), Gaps = 3/237 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKST N +IGQK++I+++KPQTTR++I GI + + Q+I DTPGI
Sbjct: 7 SGFVAIIGRPNVGKSTFLNYVIGQKIAIMSDKPQTTRNKIQGIYTTDDSQIIFIDTPGI- 65
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L M+ + S D ++ +V+A + + D+ + + + + K PI LV+N
Sbjct: 66 HKPQSKLGDFMVDSALSTLNEVDAVLFMVNATQKRGKGDDFIIKRLQNVKK--PIYLVIN 123
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D I P +I ++ Y D EV P+SA G+ V ++ D ++T LP GP +YP+D V
Sbjct: 124 KIDQIHPNDILPIVDDYRHALDFQEVYPISALKGNNVFELVDNLVTDLPEGPQFYPEDEV 183
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++HPERF + E+IREK+ R E+P++ V K K + I+VE+NSQ
Sbjct: 184 TDHPERFIISELIREKVNQLTREEIPHSVAVVTERVKRENEQKIQVSASIIVERNSQ 240
>gi|332879047|ref|ZP_08446756.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047628|ref|ZP_09109226.1| ribosome biogenesis GTPase Era [Paraprevotella clara YIT 11840]
gi|332682996|gb|EGJ55884.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529316|gb|EHG98750.1| ribosome biogenesis GTPase Era [Paraprevotella clara YIT 11840]
Length = 294
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 151/246 (61%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q+ DTPG
Sbjct: 3 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTEDMQICFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ + LE+ K +P+LL+
Sbjct: 63 VLKPNYKLQESMLNFS-ESALQDADVLLYVTDMVETPDKNGDFLEKV---SKMDVPVLLL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D+ E+ K+E + E+IP+SA ++ + + I LP P Y+ KD
Sbjct: 119 INKIDVSNQQELTSKVEAWHAVLPKAEIIPISALCKFNIDTVLNRIKELLPDSPPYFGKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
++ P RFFV EIIREKI + Y E+PY+ +V V +K AK I V I VE++SQ
Sbjct: 179 QWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVEQFKEE--AKSIHINVVIYVERDSQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|260101321|ref|ZP_05751558.1| GTP-binding protein Era [Lactobacillus helveticus DSM 20075]
gi|417008522|ref|ZP_11945641.1| GTPase Era [Lactobacillus helveticus MTCC 5463]
gi|260084906|gb|EEW69026.1| GTP-binding protein Era [Lactobacillus helveticus DSM 20075]
gi|328465883|gb|EGF37066.1| GTPase Era [Lactobacillus helveticus MTCC 5463]
Length = 301
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALLGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDKMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I +L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEEIGKGDQYIANLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLNTINKYLPEGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VEK+
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLLIEATIYVEKDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|399889914|ref|ZP_10775791.1| GTPase Era [Clostridium arbusti SL206]
Length = 297
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 148/251 (58%), Gaps = 3/251 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G+PNVGKSTL N ++G+KLSIV++KPQTTR+ I I + + Q+I DTPG
Sbjct: 2 HKSGFVTIIGRPNVGKSTLLNYIMGEKLSIVSSKPQTTRNNIQTILTAKDSQLIFVDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K HML M+K + + D IV + R DE + E + + +P+ LV
Sbjct: 62 IHKPK-HMLGEYMVKLATDSFKDVDLIVFVTTPDVIMGRGDEFILEQLKELN--IPVFLV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D +A+ L+ Y + + E+IP+SA G V+ + + ++ +P GP YYP+D
Sbjct: 119 VNKIDETTNERLAQTLKNYSEKFNFKEIIPISAYKGKNVDKLIEIMIGNMPEGPQYYPED 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++++ ERF V EIIREK +EVP+ V ++S K I+ + EKNS K
Sbjct: 179 MLTDVQERFVVSEIIREKALRLLSDEVPHGIAVEIMSMKQNDKGVYNIEATLFCEKNSHK 238
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 239 GIIIGKSGNML 249
>gi|322387708|ref|ZP_08061317.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
gi|321141575|gb|EFX37071.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
Length = 311
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 16 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 75
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 76 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 132
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 133 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPSDQ 192
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 193 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 252
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 253 GIIIGKGGAML 263
>gi|315612998|ref|ZP_07887909.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 49296]
gi|315315108|gb|EFU63149.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 49296]
Length = 299
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|306825398|ref|ZP_07458738.1| GTP-binding protein Era [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|417940160|ref|ZP_12583448.1| GTP-binding protein Era [Streptococcus oralis SK313]
gi|304432336|gb|EFM35312.1| GTP-binding protein Era [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|343389041|gb|EGV01626.1| GTP-binding protein Era [Streptococcus oralis SK313]
Length = 299
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|326803486|ref|YP_004321304.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a]
gi|326650900|gb|AEA01083.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a]
Length = 303
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 150/247 (60%), Gaps = 3/247 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N+ SG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR++I I + E Q++ DTP
Sbjct: 6 NYHSGFVAIVGRPNVGKSTLLNHIIGQKVAIMSDKAQTTRNKIHAIYTTDEVQIVFIDTP 65
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+K+ SA + I++LV++ + D + E + + P +L
Sbjct: 66 GIHKPK-HELGEYMVKSAYSALDEVEVILMLVNSTEKIGPGDRFIMEKIAAYN--TPKIL 122
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D + ++A LE D++IP+SA G V+ + + ++PLGP YYP+
Sbjct: 123 AVNKTDQLDKEDLAAYLESIPNKDIFDQIIPLSALTGDNVDQLLKELTKEMPLGPQYYPE 182
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V++HPE F V E+IRE+I R E+P++ V V + K + I+VE+ SQ
Sbjct: 183 DQVTDHPEYFVVSEMIREQILQLTREEIPHSVAVTVDKMQKDEYDKVHVYANIIVERKSQ 242
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 243 KGIIIGK 249
>gi|417915206|ref|ZP_12558827.1| ribosome biogenesis GTPase Era [Streptococcus mitis bv. 2 str.
SK95]
gi|342835320|gb|EGU69571.1| ribosome biogenesis GTPase Era [Streptococcus mitis bv. 2 str.
SK95]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|238927458|ref|ZP_04659218.1| GTP-binding protein Era [Selenomonas flueggei ATCC 43531]
gi|238884740|gb|EEQ48378.1| GTP-binding protein Era [Selenomonas flueggei ATCC 43531]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 146/255 (57%), Gaps = 9/255 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+KSG+VAV+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTP
Sbjct: 3 TYKSGFVAVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTEEDAQIIFLDTP 62
Query: 172 GIIEKKIHMLDSMMMKNVRSA---GINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
G+ + L + M K A +V + + A ER IL++ P
Sbjct: 63 GV-HRPQDRLGAYMAKATEGALHGVDVVVFVVDVTEKMGAGERY--ILKQLAAVQA---P 116
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LL +NK D I E + Y + D ++P+SA+ + + D I KLP GP Y
Sbjct: 117 VLLAVNKIDRIPHTESLPVIASYAQMYDFAAIVPISAREEENLTGLIDEIKAKLPEGPQY 176
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YPKD+V++ PER + E+IREK+ R+EVP+A V+V TRP +I+ I VE+
Sbjct: 177 YPKDMVTDQPERLIIAELIREKVLELTRDEVPHAVAVDVEEMTTRPKGDVYIRAVIYVER 236
Query: 349 NSQKIILIGKVSPFL 363
SQK I+IG L
Sbjct: 237 TSQKGIVIGARGALL 251
>gi|417918417|ref|ZP_12561969.1| GTP-binding protein Era [Streptococcus parasanguinis SK236]
gi|342828872|gb|EGU63238.1| GTP-binding protein Era [Streptococcus parasanguinis SK236]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADELRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|306829343|ref|ZP_07462533.1| GTP-binding protein Era [Streptococcus mitis ATCC 6249]
gi|322374470|ref|ZP_08048984.1| GTP-binding protein Era [Streptococcus sp. C300]
gi|414158333|ref|ZP_11414627.1| GTPase Era [Streptococcus sp. F0441]
gi|419779053|ref|ZP_14304934.1| GTP-binding protein Era [Streptococcus oralis SK10]
gi|419780420|ref|ZP_14306270.1| GTP-binding protein Era [Streptococcus oralis SK100]
gi|304428429|gb|EFM31519.1| GTP-binding protein Era [Streptococcus mitis ATCC 6249]
gi|321279970|gb|EFX57009.1| GTP-binding protein Era [Streptococcus sp. C300]
gi|383185579|gb|EIC78075.1| GTP-binding protein Era [Streptococcus oralis SK100]
gi|383186817|gb|EIC79282.1| GTP-binding protein Era [Streptococcus oralis SK10]
gi|410870878|gb|EKS18835.1| GTPase Era [Streptococcus sp. F0441]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|298373637|ref|ZP_06983626.1| GTP-binding protein Era [Bacteroidetes oral taxon 274 str. F0058]
gi|298274689|gb|EFI16241.1| GTP-binding protein Era [Bacteroidetes oral taxon 274 str. F0058]
Length = 297
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 151/248 (60%), Gaps = 9/248 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H++G+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI +G ++Q++ DTPG
Sbjct: 2 HRAGFVNIVGNPNVGKSTLMNALVGERISIITSKAQTTRHRIMGIVNGEDFQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE--EGVGDHKDKLPIL 230
++ K + L M + SA +AD ++ + D E+ + LE + +G
Sbjct: 62 VL-KPNYKLQESMREFSDSALKDADILLYVTDVADNCEKNADFLEKVKHIGSK-----TF 115
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
+++NK DLI + K ++++ E++P+SA+ G+ + I+ LP P Y+
Sbjct: 116 VMINKIDLIDEQRLLKLVDFWHTALPEAEIVPISAQERFGISQLLKRIVELLPESPPYFD 175
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
KD +++ PERFFV EIIREKI + Y EVPY+ +V V +K + I I E++S
Sbjct: 176 KDALTDRPERFFVNEIIREKILLCYDKEVPYSVEVAVEEFKEEENIIN-ISAVIYCERDS 234
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 235 QKGIIIGK 242
>gi|116627505|ref|YP_820124.1| GTP-binding protein Era [Streptococcus thermophilus LMD-9]
gi|386086311|ref|YP_006002185.1| GTP-binding protein [Streptococcus thermophilus ND03]
gi|387909404|ref|YP_006339710.1| GTP-binding protein Era [Streptococcus thermophilus MN-ZLW-002]
gi|116100782|gb|ABJ65928.1| GTPase [Streptococcus thermophilus LMD-9]
gi|312278024|gb|ADQ62681.1| GTP-binding protein [Streptococcus thermophilus ND03]
gi|387574339|gb|AFJ83045.1| GTP-binding protein Era [Streptococcus thermophilus MN-ZLW-002]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ + + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIKRL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + K D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKKGAML 251
>gi|356472767|gb|AET10448.1| putative GTP-binding protein Era [Streptococcus australis]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|421277242|ref|ZP_15728062.1| GTP-binding protein Era [Streptococcus mitis SPAR10]
gi|395876523|gb|EJG87599.1| GTP-binding protein Era [Streptococcus mitis SPAR10]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|419843891|ref|ZP_14367196.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
gi|385702315|gb|EIG39460.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|406586430|ref|ZP_11061361.1| GTPase Era [Streptococcus sp. GMD1S]
gi|419813651|ref|ZP_14338464.1| GTPase Era [Streptococcus sp. GMD2S]
gi|419817014|ref|ZP_14341185.1| GTPase Era [Streptococcus sp. GMD4S]
gi|404466555|gb|EKA11887.1| GTPase Era [Streptococcus sp. GMD4S]
gi|404472762|gb|EKA17177.1| GTPase Era [Streptococcus sp. GMD2S]
gi|404474110|gb|EKA18430.1| GTPase Era [Streptococcus sp. GMD1S]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLTQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|393785544|ref|ZP_10373694.1| GTP-binding protein Era [Bacteroides salyersiae CL02T12C01]
gi|392662299|gb|EIY55863.1| GTP-binding protein Era [Bacteroides salyersiae CL02T12C01]
Length = 293
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 151/246 (61%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERVSIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E +E+ K +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADILLYVTDVIETPDKNNEFIEKV---RKMTVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ + +E ++ E+IP+SA ++ + + LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLIQLVEEWKALLPQAEIIPISAASKFNIDYVMKRVKELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K I I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEQFKEEAKMIH-IHAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|227904119|ref|ZP_04021924.1| GTP-binding protein Era [Lactobacillus acidophilus ATCC 4796]
gi|227868138|gb|EEJ75559.1| GTP-binding protein Era [Lactobacillus acidophilus ATCC 4796]
Length = 308
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + Q+I DTPGI
Sbjct: 14 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDRMQVIFVDTPGI 73
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLV---DACKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V D K + I ++L+E K+P+
Sbjct: 74 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEDMGKGDQYIADLLKEV------KVPVF 126
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G++D+ + I LP GP YY
Sbjct: 127 LVINKVDQIHPNKLLPIMDSYHKLDGFKEILPISATQGIGIDDLLNTIYKYLPAGPQYYD 186
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VE++
Sbjct: 187 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVVVDQMNKHQNGKLVIEATIYVERDG 246
Query: 351 Q 351
Q
Sbjct: 247 Q 247
>gi|58337483|ref|YP_194068.1| GTP-binding protein Era [Lactobacillus acidophilus NCFM]
gi|81311455|sp|Q5FJT7.1|ERA_LACAC RecName: Full=GTPase Era
gi|58254800|gb|AAV43037.1| GTP-binding protein [Lactobacillus acidophilus NCFM]
Length = 301
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + Q+I DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDRMQVIFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLV---DACKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V D K + I ++L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEDMGKGDQYIADLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G++D+ + I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLDGFKEILPISATQGIGIDDLLNTIYKYLPAGPQYYD 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VE++
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVVVDQMNKHQNGKLVIEATIYVERDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|358464761|ref|ZP_09174719.1| ribosome biogenesis GTPase Era [Streptococcus sp. oral taxon 058
str. F0407]
gi|417794352|ref|ZP_12441610.1| GTP-binding protein Era [Streptococcus oralis SK255]
gi|334270196|gb|EGL88603.1| GTP-binding protein Era [Streptococcus oralis SK255]
gi|357066290|gb|EHI76440.1| ribosome biogenesis GTPase Era [Streptococcus sp. oral taxon 058
str. F0407]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|210617164|ref|ZP_03291431.1| hypothetical protein CLONEX_03653 [Clostridium nexile DSM 1787]
gi|210149439|gb|EEA80448.1| hypothetical protein CLONEX_03653 [Clostridium nexile DSM 1787]
Length = 299
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 151/257 (58%), Gaps = 10/257 (3%)
Query: 110 HPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYD 169
++KSG+V ++G+PNVGKSTL N +IGQK++I +NKPQTTR+RI + + E Q++ D
Sbjct: 2 RADYKSGFVTLIGRPNVGKSTLMNYLIGQKIAITSNKPQTTRNRIQTVLTMEEGQIVFVD 61
Query: 170 TPGIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDH--KDK 226
TPGI + K + + M+ NV +N D ++ LV+ P E+ + D K K
Sbjct: 62 TPGIHKAKNKLGEYMV--NVAERTLNEVDVVLWLVE----PSTFIGAGEKHIADQLKKVK 115
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P++LV+NK D++K E+ ++ Y K D E++PVSA+ G +++ IL LP GP
Sbjct: 116 TPVVLVINKVDMVKREEVLTFIDAYRKIYDFAEIVPVSARSGENTDELVKVILQYLPYGP 175
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
+Y +D V++ PER V E+IREK E+P+ V++ K R D I I+
Sbjct: 176 QFYDEDTVTDQPERQIVSELIREKALHCLNEEIPHGIAVSIDRMKARKKVMD-IDATIIC 234
Query: 347 EKNSQKIILIGKVSPFL 363
E++S K I+IGK L
Sbjct: 235 ERDSHKGIIIGKQGSML 251
>gi|397904343|ref|ZP_10505260.1| GTP-binding protein Era [Caloramator australicus RC3]
gi|343179090|emb|CCC58159.1| GTP-binding protein Era [Caloramator australicus RC3]
Length = 296
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 143/246 (58%), Gaps = 4/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+V ++G+PNVGKSTL N +G+K+SI++NKPQTTR++I I + YQ+I DTPGI
Sbjct: 5 RSGFVTIIGRPNVGKSTLLNHYLGEKISIISNKPQTTRNKIQAIMTKDNYQIIFLDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L M+K + D ++ L++ + P D + + K PI+LV+
Sbjct: 65 -HKPRTRLGEYMVKVAKETLNEVDIVLFLINPSEKPNEGDLHIINQLSTVKT--PIILVI 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + +AK ++ Y K D E++P+SA G + + + I++ LP GP Y+P D+
Sbjct: 122 NKVDTVSKEILAKTIDTYSKLYDFKEIVPISALKGDNTDRLLNIIVSLLPEGPQYFPADM 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQK 352
+++ PE+F V EIIREK+ + EVP+ V V+S K I I EK + K
Sbjct: 182 ITDQPEKFIVSEIIREKLLHNLKEEVPHGTAVEVISMKADDEKGIVNINATIYCEKETHK 241
Query: 353 IILIGK 358
I+IG+
Sbjct: 242 AIIIGR 247
>gi|307243689|ref|ZP_07525829.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678]
gi|306492898|gb|EFM64911.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678]
Length = 300
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 152/249 (61%), Gaps = 7/249 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V+++G+PNVGKSTL N M+G+K++I+++KPQTTR+ I + + + Q++ DTPG
Sbjct: 3 YKSGFVSIVGRPNVGKSTLMNNMVGEKIAIMSDKPQTTRNTIQAVYTDDQAQIVFLDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K + L MM+K+ + N DCI+ +VD + D ++ E + K K+P+ LV
Sbjct: 63 IHKPK-NKLGQMMVKSAEESFKNVDCILFVVDDSDKIGKGDSMIIENL--RKAKVPVFLV 119
Query: 233 LNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D I EI ++ Y++ E+IPVSA G V+ + I L LGP Y+P
Sbjct: 120 INKVDKIANKEEIFDLIKMYDQEGLFKEIIPVSALKGSNVDSLIKAIKQTLDLGPKYFPD 179
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV--EKN 349
+V++ PER V E+IREK+ +EVP+ + + K R KD + V V+ E+N
Sbjct: 180 YMVTDQPERVLVAELIREKVLQYTNDEVPHGIAIEIEKMKARKD-KDIVDVSAVIYCERN 238
Query: 350 SQKIILIGK 358
S K I+IGK
Sbjct: 239 SHKGIIIGK 247
>gi|56459917|ref|YP_155198.1| GTPase Era [Idiomarina loihiensis L2TR]
gi|56178927|gb|AAV81649.1| GTPase Era [Idiomarina loihiensis L2TR]
Length = 305
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 151/255 (59%), Gaps = 4/255 (1%)
Query: 105 FDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 164
D N SG+VA++G+PNVGKSTL N+++GQK+SI +NKPQTTRHRILG+ + Q
Sbjct: 3 LDIELDENKHSGFVAIVGRPNVGKSTLINRLLGQKISITSNKPQTTRHRILGVDTDDGCQ 62
Query: 165 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 224
I DTPG+ +++ ++ +M + SA + D ++ +V+ K E +LE+ +
Sbjct: 63 AIYVDTPGMHKQEPRAINRVMNQTASSALKDVDLVLFVVENLKWLEDDKMVLEK---IQR 119
Query: 225 DKLPILLVLNKKDLIKPGE-IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K+P++L++NK D +K E + L+W + D ++P+SA +G V+++R + + L
Sbjct: 120 SKVPVVLLVNKVDQLKDKERLLPHLQWLNEQHKFDAILPISATHGDNVDELRKIVRSHLQ 179
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
G YYP+D V++ RF EI+REK+ +E+PY V + + I
Sbjct: 180 PGYHYYPEDYVTDRSVRFMAAEIVREKLMRFTGDELPYETTVEIEQFGQSEKGTTHIHAL 239
Query: 344 IVVEKNSQKIILIGK 358
I+VE+ +QK ++IG+
Sbjct: 240 ILVEREAQKRMIIGQ 254
>gi|222152667|ref|YP_002561842.1| GTP-binding protein Era [Streptococcus uberis 0140J]
gi|254783667|sp|B9DRF9.1|ERA_STRU0 RecName: Full=GTPase Era
gi|222113478|emb|CAR41209.1| GTP-binding protein Era homolog [Streptococcus uberis 0140J]
Length = 299
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K +P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERLKNAK--IPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLISLLTDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + E+P++ V + S K + T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDQVTDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGSML 251
>gi|87125491|ref|ZP_01081336.1| GTP-binding protein ERA-like protein [Synechococcus sp. RS9917]
gi|86166791|gb|EAQ68053.1| GTP-binding protein ERA-like protein [Synechococcus sp. RS9917]
Length = 311
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 158/268 (58%), Gaps = 12/268 (4%)
Query: 104 EFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY 163
+ S H+SG+VA++G+PNVGKSTL NQ++G K++I + QTTR+R+ I + PE
Sbjct: 2 DLTPGSQTPHRSGFVALIGRPNVGKSTLVNQLVGDKVAITSPVAQTTRNRLRAILTTPEA 61
Query: 164 QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH 223
Q+IL DTPG I K H+L ++++ RSA D +++L++ C+AP R D + + +
Sbjct: 62 QLILVDTPG-IHKPHHLLGERLVQSARSAIGEVDLVLLLLEGCEAPGRGDAFIIQLL--Q 118
Query: 224 KDKLPILLVLNKKDLIKPGEIAKK--LEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWILT 280
+ +LP+L+VLNK D + P E + L + E D V SA G G ++ I
Sbjct: 119 QQRLPVLVVLNKWDRV-PAERRPEADLAYRELLETPDWPVHHCSALSGAGCPELVQAIAA 177
Query: 281 KLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV-----VSYKTRPT 335
+LP GP YP D+VS+ PER + E+IRE++ +Q R E+P++ V + + K +
Sbjct: 178 RLPEGPQLYPADMVSDQPERLLMAELIREQVLLQTREEIPHSVAVQIDRVDEMPSKGKGK 237
Query: 336 AKDFIQVEIVVEKNSQKIILIGKVSPFL 363
+ + ++VE+ SQK ILIGK L
Sbjct: 238 SCTAVLATVLVERKSQKGILIGKGGAML 265
>gi|161507651|ref|YP_001577605.1| GTP-binding protein Era [Lactobacillus helveticus DPC 4571]
gi|254783658|sp|A8YVM7.1|ERA_LACH4 RecName: Full=GTPase Era
gi|160348640|gb|ABX27314.1| GTP-binding protein [Lactobacillus helveticus DPC 4571]
Length = 301
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALLGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDKMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I +L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEEIGKGDQYIANLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLLIMDSYHKLEGFKEILPISATQGIGIEDLLNTINKYLPEGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VEK+
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLLIEATIYVEKDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|357030877|ref|ZP_09092821.1| GTP-binding protein Era [Gluconobacter morbifer G707]
gi|356415571|gb|EHH69214.1| GTP-binding protein Era [Gluconobacter morbifer G707]
Length = 301
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 140/247 (56%), Gaps = 7/247 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N++ G KLSIV+ K QTTR R LGI Q+IL D PGI
Sbjct: 10 RCGFVALVGAPNAGKSTLLNRLAGAKLSIVSPKAQTTRFRTLGIVMHEGAQIILVDLPGI 69
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID--EILEEGVGDHKDKLPILL 231
+ + LD M+ + +AD ++LVDA KA R D EI+ G K + L
Sbjct: 70 FKPR-RRLDRAMVNAAWTGSQDADLTLLLVDA-KAGLRDDVREIIGRLAGSGKR---VWL 124
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
VLNK DL+ E+ V+ V +SA+ G GV+D+ D + +LP GP YP+
Sbjct: 125 VLNKTDLVDRAELLPLTREISDLIPVEHVFMLSARSGDGVKDLMDRLAAELPEGPYLYPE 184
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P+R E++RE+IFMQ E+PY V S+K RP I+V I V +
Sbjct: 185 DDLTDLPDRLLAAELVREQIFMQTHEEIPYQATVETESFKERPDGSVRIEVTIYVSRPGH 244
Query: 352 KIILIGK 358
K ILIG+
Sbjct: 245 KAILIGE 251
>gi|312868217|ref|ZP_07728417.1| ribosome biogenesis GTPase Era [Streptococcus parasanguinis F0405]
gi|322389989|ref|ZP_08063528.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 903]
gi|387879990|ref|YP_006310293.1| Era-like GTP-binding protein [Streptococcus parasanguinis FW213]
gi|419799282|ref|ZP_14324640.1| GTP-binding protein Era [Streptococcus parasanguinis F0449]
gi|311095962|gb|EFQ54206.1| ribosome biogenesis GTPase Era [Streptococcus parasanguinis F0405]
gi|321143302|gb|EFX38741.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 903]
gi|385698363|gb|EIG28730.1| GTP-binding protein Era [Streptococcus parasanguinis F0449]
gi|386793440|gb|AFJ26475.1| Era-like GTP-binding protein [Streptococcus parasanguinis FW213]
Length = 299
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|357639006|ref|ZP_09136879.1| GTP-binding protein Era [Streptococcus urinalis 2285-97]
gi|418418165|ref|ZP_12991356.1| GTPase Era [Streptococcus urinalis FB127-CNA-2]
gi|357587460|gb|EHJ56868.1| GTP-binding protein Era [Streptococcus urinalis 2285-97]
gi|410869264|gb|EKS17227.1| GTPase Era [Streptococcus urinalis FB127-CNA-2]
Length = 299
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDNEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIMERL--KAAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EVI +SA G+ VE + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFKEVILISALQGNNVETLLQVLKDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REKI EVP++ V V S K P T K I+V I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKILKLTEQEVPHSVAVVVDSMKRDPETDKVHIRVTIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|295109868|emb|CBL23821.1| GTP-binding protein Era [Ruminococcus obeum A2-162]
Length = 302
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 146/257 (56%), Gaps = 11/257 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+ A++G+PNVGKSTL N +IGQK++I + KPQTTR+RI + + + Q++ DTP
Sbjct: 4 NFKSGFTAIIGRPNVGKSTLMNHLIGQKIAITSKKPQTTRNRIQTVYTCDDGQIVFLDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLP 228
GI + K + L M++ + D I+ LV+ A ER I E+ G H +P
Sbjct: 64 GIHKAK-NKLGEYMVQVAERTLKDVDVILWLVEPTTFIGAGER--HIAEQLQGLH---IP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++LV+NK D + EI K ++ Y K D DE+IP SA EDI IL LP GP +
Sbjct: 118 VILVINKVDTVDKDEILKAIDTYRKLYDFDEIIPCSALRNQNTEDIIPSILKYLPYGPMF 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVV 346
Y +D V++ P+R EIIREK E+P+ V + K RP + ++ I+
Sbjct: 178 YDEDTVTDQPQRQIAAEIIREKALHALDAEIPHGIAVAIDRMKERPGKNRLVDIDATIIC 237
Query: 347 EKNSQKIILIGKVSPFL 363
E++S K I+IGK L
Sbjct: 238 ERDSHKGIIIGKQGAML 254
>gi|113955090|ref|YP_729987.1| GTP-binding protein Era [Synechococcus sp. CC9311]
gi|113882441|gb|ABI47399.1| GTP-binding protein Era [Synechococcus sp. CC9311]
Length = 317
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 154/258 (59%), Gaps = 12/258 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+PNVGKSTL NQ+IG K++I + QTTR+R+ I + E Q+IL DTPG
Sbjct: 18 RSGFVALIGRPNVGKSTLVNQLIGDKIAITSPVAQTTRNRLRAILTTDEAQLILVDTPG- 76
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
I K H+L +++ RSA D +++L++ C+AP R D + + + + LP+ ++L
Sbjct: 77 IHKPHHLLGERLVRTARSAIGEVDQVLLLLEGCEAPGRGDAFIVQLL--RQQSLPVQVLL 134
Query: 234 NKKDLIKPGEI--AKKLEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
NK DL+ P E A + E ++ D V SA G G ++ I + +P GP YP
Sbjct: 135 NKWDLV-PLEQKDAADAAYRELLSETDWPVHRCSALSGDGCPELVKAISSLMPEGPQLYP 193
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV-----VSYKTRPTAKDFIQVEIV 345
D+VS+ PER +GE+IRE++ + R EVP++ V++ + K + + + ++
Sbjct: 194 SDMVSDQPERLLMGELIREQVLLNTREEVPHSVAVSIDRIEEIPAKGKGNGRTAVLATVL 253
Query: 346 VEKNSQKIILIGKVSPFL 363
VE+ SQK ILIGK L
Sbjct: 254 VERKSQKGILIGKGGAML 271
>gi|385813664|ref|YP_005850057.1| GTP-binding protein era-like protein [Lactobacillus helveticus H10]
gi|323466383|gb|ADX70070.1| GTP-binding protein era-like protein [Lactobacillus helveticus H10]
Length = 301
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 142/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDKMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V++ K + I +L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVESEEIGKGDQYIANLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLNTINKYLPEGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VEK+
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLISQEVPHATAVAVDQMNKHQNGKLLIEATIYVEKDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|228478255|ref|ZP_04062863.1| GTP-binding protein Era [Streptococcus salivarius SK126]
gi|418018215|ref|ZP_12657771.1| GTPase Era [Streptococcus salivarius M18]
gi|228249934|gb|EEK09204.1| GTP-binding protein Era [Streptococcus salivarius SK126]
gi|345527064|gb|EGX30375.1| GTPase Era [Streptococcus salivarius M18]
Length = 299
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAIIGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++E + D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIEDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDEMKRDEDTDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKQGSML 251
>gi|307564581|ref|ZP_07627121.1| GTP-binding protein Era [Prevotella amnii CRIS 21A-A]
gi|307346739|gb|EFN92036.1| GTP-binding protein Era [Prevotella amnii CRIS 21A-A]
Length = 293
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDNAQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + P++ + L++ K ++P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADILLYVTDVVEDPKKNIDFLDKV---SKMQIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + ++ + E++P+SA+ G + + I LP PA++ KD
Sbjct: 118 INKIDESDQQRLVMLVDIWHSLLPNAEILPISAQNKFGTDILLKRIYELLPESPAFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y EVPY+ +V V S+K + I I VE+NSQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEVPYSVEVVVDSFKEN-EQQIHIGAIIYVERNSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|417937716|ref|ZP_12581016.1| GTP-binding protein Era [Streptococcus infantis SK970]
gi|343391980|gb|EGV04553.1| GTP-binding protein Era [Streptococcus infantis SK970]
Length = 436
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 141 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 200
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 201 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 257
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 258 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSDQ 317
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 318 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 377
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 378 GIIIGKGGAML 388
>gi|410943089|ref|ZP_11374830.1| GTPase Era [Gluconobacter frateurii NBRC 101659]
Length = 295
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 141/246 (57%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N++ G KLSIV+ K QTTR R LGI + Q+IL D PGI
Sbjct: 4 RCGFVALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVVHQDAQIILVDLPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA-CKAPERIDEILEEGVGDHKDKLPILLV 232
+ + LD M+ + +AD ++L+DA E + EI+ + +K I LV
Sbjct: 64 FKPR-RRLDRAMVNAAWTGSQDADLTLLLIDAKAGLREDVREIIAKLAEGNKK---IWLV 119
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ E+ + V+ V +SA+ G GVED+ + + +LP GP YP+D
Sbjct: 120 LNKTDLVSAEELLPLTQEVSSLLTVEHVFMLSARSGDGVEDLMNHLACELPEGPYLYPED 179
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P+R E++RE+IFMQ E+PY V S+K RP I+V I V + K
Sbjct: 180 DLTDLPDRLLAAELVREQIFMQTHEEIPYQATVETESFKERPDGSVRIEVTIYVSRPGHK 239
Query: 353 IILIGK 358
ILIG+
Sbjct: 240 AILIGE 245
>gi|291522460|emb|CBK80753.1| GTP-binding protein Era [Coprococcus catus GD/7]
Length = 300
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 145/251 (57%), Gaps = 3/251 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+ ++G+PNVGKSTL N +IGQK++I +NKPQTTR+RI + + E Q++ DTPG
Sbjct: 5 YKSGFATLIGRPNVGKSTLMNHLIGQKIAITSNKPQTTRNRIQTVYTSEEGQIVFVDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K + + M+ R+ D I+ LV+ ++ + E + K K PI+LV
Sbjct: 65 IHKAKNKLGEYMVTVAERTLS-EVDVILWLVEPTTFIGAGEQHIAEQL--RKTKTPIILV 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D +K EI K ++ Y+ D E++P SA G ED+ I+ LP GP +Y +D
Sbjct: 122 INKIDTVKREEILKSIDAYKDICDFAEIVPCSALKGDNTEDLIKVIMKYLPYGPQFYDED 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
V++ PER V E+IREK EVP+ V++ K R + I I+ E++S K
Sbjct: 182 TVTDQPERQIVAELIREKALRSLNEEVPHGIAVSIDQMKARNSRLIDIDATIICERDSHK 241
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 242 GIIIGKQGAML 252
>gi|421452007|ref|ZP_15901368.1| GTP-binding protein era [Streptococcus salivarius K12]
gi|400182438|gb|EJO16700.1| GTP-binding protein era [Streptococcus salivarius K12]
Length = 299
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDQMKRDEDTDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKQGSML 251
>gi|340399227|ref|YP_004728252.1| GTP-binding protein [Streptococcus salivarius CCHSS3]
gi|387761693|ref|YP_006068670.1| GTP-binding protein Era [Streptococcus salivarius 57.I]
gi|338743220|emb|CCB93728.1| GTP-binding protein [Streptococcus salivarius CCHSS3]
gi|339292460|gb|AEJ53807.1| GTP-binding protein Era [Streptococcus salivarius 57.I]
Length = 299
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D ++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQAKVPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E+IP+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDEMKRDEDTDKIHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKQGSML 251
>gi|414341279|ref|YP_006982800.1| GTP-binding protein Era [Gluconobacter oxydans H24]
gi|411026614|gb|AFV99868.1| GTP-binding protein Era [Gluconobacter oxydans H24]
gi|453330554|dbj|GAC87300.1| GTP-binding protein Era [Gluconobacter thailandicus NBRC 3255]
Length = 301
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 143/246 (58%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N++ G KLSIV+ K QTTR R LGI + Q+IL D PGI
Sbjct: 10 RCGFVALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVVHQDAQIILVDLPGI 69
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-HKDKLPILLV 232
+ + LD M+ + +AD ++L+DA KA R D + E +G + K + LV
Sbjct: 70 FKPR-RRLDRAMVNAAWTGSQDADLTLLLIDA-KAGLRED--VREIIGKLAEGKKKVWLV 125
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ E+ + V+ V +SA+ G GVED+ + + +LP GP YP+D
Sbjct: 126 LNKTDLVSAEELLPLTQEVSGLLSVEHVFMLSARSGDGVEDLMNHLARELPEGPYLYPED 185
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P+R E++RE+IFMQ E+PY V S+K RP I+V I V + K
Sbjct: 186 DLTDLPDRLLAAELVREQIFMQTHEEIPYQATVETESFKERPDGSVRIEVTIYVSRPGHK 245
Query: 353 IILIGK 358
ILIG+
Sbjct: 246 AILIGE 251
>gi|55822589|ref|YP_141030.1| GTP-binding protein Era [Streptococcus thermophilus CNRZ1066]
gi|55738574|gb|AAV62215.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066]
Length = 299
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KQAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + K D E+IP+SA G+ V + D L G Y+P D
Sbjct: 121 NKIDRVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVSSDYLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V + S K T I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDTVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKKGAML 251
>gi|239501067|ref|ZP_04660377.1| GTP-binding protein Era [Acinetobacter baumannii AB900]
gi|421677758|ref|ZP_16117647.1| GTP-binding protein Era [Acinetobacter baumannii OIFC111]
gi|410392639|gb|EKP44996.1| GTP-binding protein Era [Acinetobacter baumannii OIFC111]
Length = 342
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLEKL---KNADMPVIL 152
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E+IPVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFGDKREILPLIQERAKLMNFAEIIPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|158423629|ref|YP_001524921.1| transcriptional regulator [Azorhizobium caulinodans ORS 571]
gi|158330518|dbj|BAF88003.1| transcriptional regulator [Azorhizobium caulinodans ORS 571]
Length = 311
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 145/249 (58%), Gaps = 11/249 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA+LG PN GKSTL NQ++G K+SIV++K QTTR + GI Q+IL DTPGI
Sbjct: 16 RCGFVALLGAPNAGKSTLTNQLVGTKVSIVSHKVQTTRAIVRGIALEGPSQVILVDTPGI 75
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD-KLPILLV 232
K L+ M+ ++ +AD + +LVDA + IDE +E + + K P L+
Sbjct: 76 FSPK-RRLERAMVNTAWTSASDADVVALLVDANRG---IDENVESILKPLAEVKRPRALI 131
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTD---VDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LNK D+I+ + LE +K T+ + V VSA G GV+D+R W K+P GP Y
Sbjct: 132 LNKIDMIRRDTL---LELAQKLTERLSFERVFMVSALKGDGVDDVRTWFAEKVPFGPWLY 188
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+D +S+ P R EI REK+F++ +E+PY V S+K I+ I VE+
Sbjct: 189 PEDQISDAPMRMLAAEITREKLFLRLHDELPYRSTVETDSWKELRDKSVRIEQTIFVERE 248
Query: 350 SQKIILIGK 358
SQ+ I++GK
Sbjct: 249 SQRKIVLGK 257
>gi|357235674|ref|ZP_09123017.1| putative GTP-binding protein era-like protein [Streptococcus
criceti HS-6]
gi|356883656|gb|EHI73856.1| putative GTP-binding protein era-like protein [Streptococcus
criceti HS-6]
Length = 298
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D ++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEERGKGDNMIMERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +K+E + D E++P+SA G+ VE + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEKIEDFRSQMDFKEIVPISALQGNNVETLLTILKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V + S + T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVVIESMRRDEETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|260583651|ref|ZP_05851399.1| GTP-binding protein Era [Granulicatella elegans ATCC 700633]
gi|260158277|gb|EEW93345.1| GTP-binding protein Era [Granulicatella elegans ATCC 700633]
Length = 302
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 147/238 (61%), Gaps = 3/238 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKST N ++GQK++I+++K QTTR++I G+ + + Q++ DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTFMNYVLGQKIAIMSDKAQTTRNKIQGVYTNQDCQIVFLDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L + M+++ SA D ++ +V+A + D+ + E + K K P+ LVL
Sbjct: 66 HKPK-HELGNFMVESAYSALKEVDAVLFMVNAAEKRGPGDDFIIEKL--KKIKTPVFLVL 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P E+ ++E Y++ +IP+S G+ V+++ + LP GP YYP D
Sbjct: 123 NKIDLISPDELLDRVESYQETIPFAGIIPISVLQGNNVQELMTTLTNHLPEGPQYYPSDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++HPE F V E+IREKI + E+P++ V V + K + I+VE+ +Q
Sbjct: 183 ITDHPEYFVVSELIREKILHLTKEEIPHSVAVTVDKMQKDEFDKVHVYANIIVERPTQ 240
>gi|352517865|ref|YP_004887182.1| GTP-binding protein Era [Tetragenococcus halophilus NBRC 12172]
gi|348601972|dbj|BAK95018.1| GTP-binding protein Era [Tetragenococcus halophilus NBRC 12172]
Length = 299
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 148/239 (61%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I G+ + Q++ DTPG
Sbjct: 4 HKSGFVAIIGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTDNMQIVFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+ A + ++ +V+A + + D ++ E + K +P+ L+
Sbjct: 64 IHKPK-HRLGDYMVNEAYGALQEVEAVLFMVNADEKRGKGDNLIIERL--QKLDVPVFLI 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D I P ++ ++ Y D EV+P+SA G+ E + + ++P GP Y+PKD
Sbjct: 121 VNKIDKIHPDDLLAVIQDYSTQMDFAEVVPLSATQGNNCETLMQLLEEQIPEGPQYFPKD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++HPE F V E++REK+ + + E+P++ V V S K K IQ I VE++SQ
Sbjct: 181 QITDHPEYFIVSELVREKVLLFTQEEIPHSVAVVVDSMKRDENDKIRIQATINVERDSQ 239
>gi|300173398|ref|YP_003772564.1| GTP-binding protein era [Leuconostoc gasicomitatum LMG 18811]
gi|299887777|emb|CBL91745.1| GTP-binding protein era [Leuconostoc gasicomitatum LMG 18811]
Length = 303
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 150/246 (60%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPGI
Sbjct: 7 KSGFVTIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDSAQVVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA R D+ + + + K+ I L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHGADAIWFVVDASMPRGRGDDFIINRLKEIKNT-AIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y E + EV P+SA+ G V ++ D ++ L GP Y+ D
Sbjct: 125 NKVDLLAPKDLLNVIASYQEDAPEWAEVFPISAREGDNVSELLDNVVAGLDEGPQYFDAD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ IVVE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKISRESEEKIHIQASIVVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|313895890|ref|ZP_07829444.1| ribosome biogenesis GTPase Era [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975315|gb|EFR40776.1| ribosome biogenesis GTPase Era [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 298
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 150/260 (57%), Gaps = 18/260 (6%)
Query: 112 NH-KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
NH KSG+ AV+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DT
Sbjct: 2 NHYKSGFAAVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------- 223
PG+ + K H L S M K A + V+V A E++ G G+
Sbjct: 62 PGVHKPK-HKLGSHMAKATEGA---LHGVDVVVFVVDATEKM------GAGEQYILKQLE 111
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K ++P+LL +NK DL++ E + Y K D ++P+SA+ + + D I LP
Sbjct: 112 KVRVPVLLAVNKIDLLRREETLPIIAGYAKTYDFAGIVPISARAEENLAGLLDEIKKHLP 171
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YYP+D+V++ PER + E++REK R+E+P+A V++ TR +++
Sbjct: 172 EGPRYYPEDMVTDQPERLIIAELVREKALELTRDEIPHAVAVDIEEITTRAKGDVYVRAV 231
Query: 344 IVVEKNSQKIILIGKVSPFL 363
I VE+ SQK I+IG L
Sbjct: 232 IYVERESQKGIVIGARGALL 251
>gi|270291317|ref|ZP_06197539.1| GTP-binding protein Era [Pediococcus acidilactici 7_4]
gi|304385067|ref|ZP_07367413.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284]
gi|418069351|ref|ZP_12706629.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|427441999|ref|ZP_18925497.1| GTP-binding protein Era [Pediococcus lolii NGRI 0510Q]
gi|270280163|gb|EFA25999.1| GTP-binding protein Era [Pediococcus acidilactici 7_4]
gi|304329261|gb|EFL96481.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284]
gi|357536820|gb|EHJ20848.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|425786867|dbj|GAC46285.1| GTP-binding protein Era [Pediococcus lolii NGRI 0510Q]
Length = 304
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 157/259 (60%), Gaps = 10/259 (3%)
Query: 102 IEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 161
+EE A H SG+VA++G+PNVGKST N ++GQK++I+++ PQTTR++I GI +
Sbjct: 1 MEENKQAFH----SGFVAIVGRPNVGKSTFLNYVVGQKVAIMSDVPQTTRNKIQGIYTTD 56
Query: 162 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG 221
Q++ DTPGI K + L M+++ S+ D ++ +V+A + D + E +
Sbjct: 57 REQIVFIDTPGI-HKAHNKLGDFMVQSAISSLNEVDAVMFMVNADQKRGAGDNYIIERLK 115
Query: 222 DHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
K++ PI LV+NK DL+ P E+ ++ Y D EV P+SA G+ + ++ + +
Sbjct: 116 KIKNR-PIYLVINKIDLVHPDELLPIVDSYRDALDWTEVFPISALQGNNINELLATLSKQ 174
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+P GP YYP D V++HPERF V E+IREK+ R EVP++ V + S K P D +
Sbjct: 175 MPEGPQYYPSDQVTDHPERFVVSELIREKVLQLTRQEVPHSVAVVIESMK--PGKDDLVD 232
Query: 342 VE--IVVEKNSQKIILIGK 358
+ I+V++ +QK I+IGK
Sbjct: 233 ISATIIVDRPTQKGIIIGK 251
>gi|340351980|ref|ZP_08674871.1| GTP-binding protein Era [Prevotella pallens ATCC 700821]
gi|339615841|gb|EGQ20508.1| GTP-binding protein Era [Prevotella pallens ATCC 700821]
Length = 293
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 148/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTENMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ K + + +M++ SA +AD ++ + D + PE+ + L++ K +P++L+
Sbjct: 62 VL-KPNYKMQELMLQFSESALADADILLYVTDVIEKPEKNADFLDKVA---KMTIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + +E + E++P+SAK G + + I LP PAY+ KD
Sbjct: 118 INKIDESNQETLITLVEKWHNLLPKAEILPISAKNKFGTDVLMKRIEELLPESPAYFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y EVPY+ +V V +K K I I VE++SQK
Sbjct: 178 QLTDKPAKFFVTEIIREKILRYYDKEVPYSVEVVVERFK-EDEKKIHINAIIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|334120212|ref|ZP_08494294.1| GTP-binding protein Era-like-protein [Microcoleus vaginatus FGP-2]
gi|333457000|gb|EGK85627.1| GTP-binding protein Era-like-protein [Microcoleus vaginatus FGP-2]
Length = 315
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 158/266 (59%), Gaps = 24/266 (9%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A+ +KSG+V ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I
Sbjct: 17 AAPAGYKSGFVGIVGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTPEAQIIF 76
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH---- 223
DTPG I K H L ++++N R+A + D ++ +VD +E G GD
Sbjct: 77 VDTPG-IHKPHHQLGKVLVQNARTAIQSVDVVLFVVDGS---------VESGGGDRYIVE 126
Query: 224 ---KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWIL 279
K+P++L +NK D +P + YE+ + + V+ SA G GVE ++ ++
Sbjct: 127 ILSNCKVPVILGMNKLDE-QPEDSVLIDRTYEQIVNPEWPVVKFSALTGEGVEPLQQLLI 185
Query: 280 TKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPY--ACQVNVVSYKTRPTAK 337
L +GP YYP D+V++ PERF +GE+IRE+I + R EVP+ A +++V + + T
Sbjct: 186 EHLEVGPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDIVQEEAKITR- 244
Query: 338 DFIQVEIVVEKNSQKIILIGKVSPFL 363
I I VE++SQK ILIGK L
Sbjct: 245 --ILATIHVERDSQKGILIGKSGSML 268
>gi|119493602|ref|ZP_01624266.1| GTP-binding protein Era [Lyngbya sp. PCC 8106]
gi|119452592|gb|EAW33775.1| GTP-binding protein Era [Lyngbya sp. PCC 8106]
Length = 312
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 155/259 (59%), Gaps = 8/259 (3%)
Query: 103 EEFDYASHPN-HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 161
E F P+ +KSG+V ++G+PNVGKSTL NQM+GQK++I + QTTR+R+ GI + P
Sbjct: 7 ENFSIPIAPDGYKSGFVGIIGRPNVGKSTLMNQMVGQKIAITSPVAQTTRNRLRGILTTP 66
Query: 162 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG 221
E Q+I DTPG I K H L +++KN + A + D ++ +VD D + + +
Sbjct: 67 EAQIIFVDTPG-IHKPHHQLGQVLVKNAQIAIRSVDVLLFVVDGSVMAGGGDRFIADLL- 124
Query: 222 DHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWIL 279
+ K+P++L LNK D +P E + E Y++ + ++ SA G GV+ ++ I+
Sbjct: 125 -NSTKVPVILGLNKLDQ-QPQEPQRINESYQQLIESHSWPILQFSALTGTGVDSLQHLII 182
Query: 280 TKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF 339
+L GP YYP D+V++ PERF +GE+IRE+I + R EVP++ +++ + P
Sbjct: 183 EQLEPGPYYYPPDLVTDQPERFIMGELIREQILLHTREEVPHSVAISIDRVEEDPKITRI 242
Query: 340 IQVEIVVEKNSQKIILIGK 358
+ I E+ SQK ILIGK
Sbjct: 243 L-ATIHAERPSQKGILIGK 260
>gi|319943506|ref|ZP_08017788.1| GTP-binding protein Era [Lautropia mirabilis ATCC 51599]
gi|319743321|gb|EFV95726.1| GTP-binding protein Era [Lautropia mirabilis ATCC 51599]
Length = 309
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ GYVA++G+PN GKSTL NQ++GQ LSI ++ QTTRHRI G+ S P Q+IL D+PG
Sbjct: 19 RCGYVALVGRPNTGKSTLLNQLLGQMLSITADRAQTTRHRIQGVLSRPHAQLILVDSPGY 78
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
++I+ L+ ++ + +S G AD +V++ +A + + DEIL G K P+++ L
Sbjct: 79 QTQRINPLNKILNRTAQSVGQQADVVVLVTEAGRWRRQDDEIL----GWLKGDAPVIVAL 134
Query: 234 NKKDLIKPGEIAKKL--EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
NK D ++ L + +E + ++P+ A+ G G+E + D I + LP G A Y +
Sbjct: 135 NKIDQLRNVNEVLPLIAQVHEAHPGLAAIVPICARNGQGIEALLDAIESNLPEGEAIYGE 194
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ PERFF EI+REK+F E+PY V + ++ + I I+VE+ +
Sbjct: 195 DELTDRPERFFAAEIVREKLFRLLGEELPYESTVVIDRFEEEGNLRR-IAATIIVERRAH 253
Query: 352 KIILIG 357
K I++G
Sbjct: 254 KPIVLG 259
>gi|443315233|ref|ZP_21044735.1| GTP-binding protein Era [Leptolyngbya sp. PCC 6406]
gi|442785174|gb|ELR95012.1| GTP-binding protein Era [Leptolyngbya sp. PCC 6406]
Length = 312
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 147/250 (58%), Gaps = 12/250 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG++A++G+PNVGKSTL NQ+IGQK++I + QTTR+R+ GI + E Q+I DTPG
Sbjct: 18 RSGFIAIVGRPNVGKSTLMNQLIGQKIAITSPVAQTTRNRLRGILTTDEAQIIFVDTPG- 76
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
I K H L +++ N R+A D ++ +VD A R D+ + E + + P+ L +
Sbjct: 77 IHKPHHELGKVLVHNARTAIGAVDVVLFVVDGSTAAGRGDQFIAELL--TPAQTPVFLGM 134
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPV---SAKYGHGVEDIRDWILTKLPLGPAYYP 290
NK DL ++A + YE D P+ SA G+ D++ ++ L GP YYP
Sbjct: 135 NKMDLCPEADLAATIASYEALA-ADHPWPICQFSATTAAGLPDLQQQLIMALEPGPYYYP 193
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVVEK 348
D+V++ PERF +GE+IRE+I R EVP++ + + + AK V I VE+
Sbjct: 194 PDLVTDQPERFIMGELIREQILHHTREEVPHSVAIAIDRVE---EAKSITHVLATIHVER 250
Query: 349 NSQKIILIGK 358
+SQK ILIGK
Sbjct: 251 DSQKGILIGK 260
>gi|282880853|ref|ZP_06289546.1| GTP-binding protein Era [Prevotella timonensis CRIS 5C-B1]
gi|281305235|gb|EFA97302.1| GTP-binding protein Era [Prevotella timonensis CRIS 5C-B1]
Length = 293
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGERISIATFKSQTTRHRIMGIVNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M + M+ + SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLQPNYKMQEYMLAFS-ESALADADILLYVTDVVETPEKNIDFLEKV---RKMTIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + +E + E++P+SA G++ + + I LP P Y+ KD
Sbjct: 118 INKIDQSNQKTLDQLVEKWHGILPNAEILPISASNKFGIDVLLNRIQELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EI REKI + Y E+PY+ +V V S+K + I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIFREKILLFYDKEIPYSVEVKVDSFK-ETEQQIHIHAVIYVERDSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|414155973|ref|ZP_11412282.1| GTPase Era [Streptococcus sp. F0442]
gi|410872182|gb|EKS20126.1| GTPase Era [Streptococcus sp. F0442]
Length = 299
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRSQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLISEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|403675440|ref|ZP_10937605.1| GTPase Era [Acinetobacter sp. NCTC 10304]
Length = 342
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 159/286 (55%), Gaps = 21/286 (7%)
Query: 90 PDRNMASPDDYEIEEFDYASH-----PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVT 144
PD N + I++F ++S + KSG+VA++G+PNVGKSTL N ++GQKLSI +
Sbjct: 10 PDSNENQDPNNLIDQF-FSSKGVTIPSDFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITS 68
Query: 145 NKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD 204
KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA + + ++ ++D
Sbjct: 69 RKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEVRAINKMMNRAAHSALRDVNLVLFVID 128
Query: 205 ACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPV 263
A K + D +LE+ +P++LV+NK D EI ++ K + E++PV
Sbjct: 129 AQKWTQNDDLVLEKL---KNADMPVILVINKADTFGDKREILPLIQERAKLMNFAEIVPV 185
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SA G +E + + I LP P Y D +++ ERF EIIREKI Q E+PY
Sbjct: 186 SALRGANLEHLSETIEKYLPYQPPLYSFDQITDRSERFLASEIIREKIMRQLGEELPYDL 245
Query: 324 QVNVVSYKTRPT-----------AKDFIQVEIVVEKNSQKIILIGK 358
V + S+KT A +I I V++ QK I+IG+
Sbjct: 246 TVQIESFKTEEATVNEKTGRLKPACTYIDATIFVDRPGQKAIVIGE 291
>gi|184159115|ref|YP_001847454.1| GTP-binding protein Era [Acinetobacter baumannii ACICU]
gi|384144224|ref|YP_005526934.1| GTPase [Acinetobacter baumannii MDR-ZJ06]
gi|387122955|ref|YP_006288837.1| GTP-binding protein Era [Acinetobacter baumannii MDR-TJ]
gi|407933704|ref|YP_006849347.1| GTP-binding protein Era [Acinetobacter baumannii TYTH-1]
gi|417569854|ref|ZP_12220712.1| GTP-binding protein Era [Acinetobacter baumannii OIFC189]
gi|417575838|ref|ZP_12226686.1| GTP-binding protein Era [Acinetobacter baumannii Naval-17]
gi|417870355|ref|ZP_12515321.1| GTPase Era [Acinetobacter baumannii ABNIH1]
gi|417874395|ref|ZP_12519248.1| GTPase Era [Acinetobacter baumannii ABNIH2]
gi|417877598|ref|ZP_12522289.1| GTPase Era [Acinetobacter baumannii ABNIH3]
gi|417881774|ref|ZP_12526084.1| GTPase Era [Acinetobacter baumannii ABNIH4]
gi|421203556|ref|ZP_15660693.1| GTP-binding protein Era [Acinetobacter baumannii AC12]
gi|421533520|ref|ZP_15979803.1| GTP-binding protein Era [Acinetobacter baumannii AC30]
gi|421628248|ref|ZP_16069033.1| GTP-binding protein Era [Acinetobacter baumannii OIFC180]
gi|421689623|ref|ZP_16129303.1| GTP-binding protein Era [Acinetobacter baumannii IS-143]
gi|421704386|ref|ZP_16143831.1| GTPase Era [Acinetobacter baumannii ZWS1122]
gi|421708164|ref|ZP_16147543.1| GTPase Era [Acinetobacter baumannii ZWS1219]
gi|421791296|ref|ZP_16227473.1| GTP-binding protein Era [Acinetobacter baumannii Naval-2]
gi|424051452|ref|ZP_17788984.1| GTP-binding protein Era [Acinetobacter baumannii Ab11111]
gi|424062491|ref|ZP_17799977.1| GTP-binding protein Era [Acinetobacter baumannii Ab44444]
gi|425754385|ref|ZP_18872247.1| GTP-binding protein Era [Acinetobacter baumannii Naval-113]
gi|445472388|ref|ZP_21452467.1| GTP-binding protein Era [Acinetobacter baumannii OIFC338]
gi|445477162|ref|ZP_21454137.1| GTP-binding protein Era [Acinetobacter baumannii Naval-78]
gi|183210709|gb|ACC58107.1| GTPase [Acinetobacter baumannii ACICU]
gi|342228042|gb|EGT92947.1| GTPase Era [Acinetobacter baumannii ABNIH1]
gi|342229117|gb|EGT93987.1| GTPase Era [Acinetobacter baumannii ABNIH2]
gi|342235315|gb|EGT99922.1| GTPase Era [Acinetobacter baumannii ABNIH3]
gi|342238529|gb|EGU02960.1| GTPase Era [Acinetobacter baumannii ABNIH4]
gi|347594717|gb|AEP07438.1| GTPase [Acinetobacter baumannii MDR-ZJ06]
gi|385877447|gb|AFI94542.1| GTP-binding protein Era [Acinetobacter baumannii MDR-TJ]
gi|395554077|gb|EJG20083.1| GTP-binding protein Era [Acinetobacter baumannii OIFC189]
gi|395571327|gb|EJG31986.1| GTP-binding protein Era [Acinetobacter baumannii Naval-17]
gi|398326930|gb|EJN43071.1| GTP-binding protein Era [Acinetobacter baumannii AC12]
gi|404557789|gb|EKA63084.1| GTP-binding protein Era [Acinetobacter baumannii IS-143]
gi|404665008|gb|EKB32971.1| GTP-binding protein Era [Acinetobacter baumannii Ab11111]
gi|404671443|gb|EKB39286.1| GTP-binding protein Era [Acinetobacter baumannii Ab44444]
gi|407190220|gb|EKE61439.1| GTPase Era [Acinetobacter baumannii ZWS1122]
gi|407190777|gb|EKE61992.1| GTPase Era [Acinetobacter baumannii ZWS1219]
gi|407902285|gb|AFU39116.1| GTP-binding protein Era [Acinetobacter baumannii TYTH-1]
gi|408708287|gb|EKL53564.1| GTP-binding protein Era [Acinetobacter baumannii OIFC180]
gi|409988520|gb|EKO44690.1| GTP-binding protein Era [Acinetobacter baumannii AC30]
gi|410403333|gb|EKP55430.1| GTP-binding protein Era [Acinetobacter baumannii Naval-2]
gi|425496881|gb|EKU62995.1| GTP-binding protein Era [Acinetobacter baumannii Naval-113]
gi|444770053|gb|ELW94211.1| GTP-binding protein Era [Acinetobacter baumannii OIFC338]
gi|444776669|gb|ELX00707.1| GTP-binding protein Era [Acinetobacter baumannii Naval-78]
Length = 342
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 159/286 (55%), Gaps = 21/286 (7%)
Query: 90 PDRNMASPDDYEIEEFDYASH-----PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVT 144
PD N + I++F ++S + KSG+VA++G+PNVGKSTL N ++GQKLSI +
Sbjct: 10 PDSNENQDPNNLIDQF-FSSKGVTIPSDFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITS 68
Query: 145 NKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD 204
KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA + + ++ ++D
Sbjct: 69 RKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEVRAINKMMNRAAHSALRDVNLVLFVID 128
Query: 205 ACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPV 263
A K + D +LE+ +P++LV+NK D EI ++ K + E++PV
Sbjct: 129 AQKWTQNDDLVLEKL---KNADMPVILVINKADTFGDKREILPLIQERAKLMNFAEIVPV 185
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SA G +E + + I LP P Y D +++ ERF EIIREKI Q E+PY
Sbjct: 186 SALRGANLEHLSETIEKYLPYQPPLYSIDQITDRSERFLASEIIREKIMRQLGEELPYDL 245
Query: 324 QVNVVSYKTRPT-----------AKDFIQVEIVVEKNSQKIILIGK 358
V + S+KT A +I I V++ QK I+IG+
Sbjct: 246 TVQIESFKTEEATVNEKTGRLKPACTYIDATIFVDRPGQKAIVIGE 291
>gi|417553511|ref|ZP_12204580.1| GTP-binding protein Era [Acinetobacter baumannii Naval-81]
gi|417560749|ref|ZP_12211628.1| GTP-binding protein Era [Acinetobacter baumannii OIFC137]
gi|421198380|ref|ZP_15655545.1| GTP-binding protein Era [Acinetobacter baumannii OIFC109]
gi|421454632|ref|ZP_15903979.1| GTP-binding protein Era [Acinetobacter baumannii IS-123]
gi|421631969|ref|ZP_16072632.1| GTP-binding protein Era [Acinetobacter baumannii Naval-13]
gi|421655505|ref|ZP_16095828.1| GTP-binding protein Era [Acinetobacter baumannii Naval-72]
gi|421666759|ref|ZP_16106847.1| GTP-binding protein Era [Acinetobacter baumannii OIFC087]
gi|421788880|ref|ZP_16225154.1| GTP-binding protein Era [Acinetobacter baumannii Naval-82]
gi|421806128|ref|ZP_16242001.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-694]
gi|395523331|gb|EJG11420.1| GTP-binding protein Era [Acinetobacter baumannii OIFC137]
gi|395565276|gb|EJG26923.1| GTP-binding protein Era [Acinetobacter baumannii OIFC109]
gi|400212422|gb|EJO43381.1| GTP-binding protein Era [Acinetobacter baumannii IS-123]
gi|400389928|gb|EJP56975.1| GTP-binding protein Era [Acinetobacter baumannii Naval-81]
gi|408508830|gb|EKK10509.1| GTP-binding protein Era [Acinetobacter baumannii Naval-72]
gi|408710515|gb|EKL55741.1| GTP-binding protein Era [Acinetobacter baumannii Naval-13]
gi|410387461|gb|EKP39916.1| GTP-binding protein Era [Acinetobacter baumannii OIFC087]
gi|410400844|gb|EKP53010.1| GTP-binding protein Era [Acinetobacter baumannii Naval-82]
gi|410407602|gb|EKP59586.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-694]
Length = 342
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 159/286 (55%), Gaps = 21/286 (7%)
Query: 90 PDRNMASPDDYEIEEFDYASH-----PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVT 144
PD N + I++F ++S + KSG+VA++G+PNVGKSTL N ++GQKLSI +
Sbjct: 10 PDSNENQDPNNLIDQF-FSSKGVTIPSDFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITS 68
Query: 145 NKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD 204
KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA + + ++ ++D
Sbjct: 69 RKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEVRAINKMMNRAAHSALRDVNLVLFVID 128
Query: 205 ACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPV 263
A K + D +LE+ +P++LV+NK D EI ++ K + E++PV
Sbjct: 129 AQKWTQNDDLVLEKL---KNADMPVILVINKADTFGDKREILPLIQERAKLMNFAEIVPV 185
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SA G +E + + I LP P Y D +++ ERF EIIREKI Q E+PY
Sbjct: 186 SALRGANLEHLSETIEKYLPYQPPLYSFDQITDRSERFLASEIIREKIMRQLGEELPYDL 245
Query: 324 QVNVVSYKTRPT-----------AKDFIQVEIVVEKNSQKIILIGK 358
V + S+KT A +I I V++ QK I+IG+
Sbjct: 246 TVQIESFKTEEATVNEKTGRLKPACTYIDATIFVDRPGQKAIVIGE 291
>gi|253580801|ref|ZP_04858064.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847871|gb|EES75838.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 302
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 148/258 (57%), Gaps = 13/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+VA++G+PNVGKSTL N +IGQK++I + KPQTTR+RI + + E Q++ DTP
Sbjct: 4 NFKSGFVAIIGRPNVGKSTLMNHLIGQKIAITSKKPQTTRNRIQTVYTCDEGQIVFLDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APER-IDEILEEGVGDHKDKL 227
GI + K + L M++ D I+ LV+ A ER I E L+ G+G +
Sbjct: 64 GIHKAK-NKLGEYMVQVAERTLKEVDAIMWLVEPSTFIGAGERHIAEQLQ-GIG-----V 116
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P++L++NK D + EI ++ Y K D E+IP SA G +DI IL LP GP
Sbjct: 117 PVILIINKIDTVSKEEILPAIDTYRKVCDFAEIIPCSALRGQNTQDIIGCILKYLPYGPM 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IV 345
+Y +D V++ P+R V EIIREK E+P+ V + KTRP + ++ I+
Sbjct: 177 FYDEDTVTDQPQRQIVAEIIREKALHALDAEIPHGIAVAIDRMKTRPGKNPIVDIDATII 236
Query: 346 VEKNSQKIILIGKVSPFL 363
E+ S K I+IGK L
Sbjct: 237 CERESHKGIIIGKQGAML 254
>gi|257065848|ref|YP_003152104.1| GTP-binding protein Era [Anaerococcus prevotii DSM 20548]
gi|256797728|gb|ACV28383.1| GTP-binding protein Era [Anaerococcus prevotii DSM 20548]
Length = 293
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 149/247 (60%), Gaps = 7/247 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+V+G+ NVGKSTL ++IG+K+SI++NKPQTTR +I I + E Q+I DTPGI
Sbjct: 3 KSGFVSVVGRANVGKSTLMEKIIGEKISIISNKPQTTRDKIQIIYNDEESQIIFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-EILEEGVGDHKDKLPILLV 232
+ + + ++ + S +D I ++VD + RID EILE K KLP +L+
Sbjct: 63 QTPRNKLQERLLTFSEESLK-ESDIITMVVDDSEEIGRIDGEILEML---EKIKLPKILL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL +IA E + + D D +I +SA G ++ D I L GPAYY +D
Sbjct: 119 INKTDLADREKIAHIRENF-RACDFDRIIEISALEGENIDVFIDTIKEMLDFGPAYYDRD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
++++ ERF VGEIIREK NEVP+ V + +K R K I+ IVVEKNS
Sbjct: 178 MITDKTERFIVGEIIREKALRNLSNEVPHGVAVRIDDFKERSNKKLIDIRATIVVEKNSH 237
Query: 352 KIILIGK 358
K I+IGK
Sbjct: 238 KEIVIGK 244
>gi|338813214|ref|ZP_08625348.1| GTP-binding protein Era [Acetonema longum DSM 6540]
gi|337274821|gb|EGO63324.1| GTP-binding protein Era [Acetonema longum DSM 6540]
Length = 302
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 147/245 (60%), Gaps = 3/245 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG+VAV+G+PNVGKSTL N +IGQK++I+++KPQTTR++IL + + P+ Q++ DTPG
Sbjct: 11 HQSGFVAVVGRPNVGKSTLVNSLIGQKIAIMSDKPQTTRNKILCVLTQPDAQILFIDTPG 70
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M++ S D I+ +VDA + ++ + E + P++L
Sbjct: 71 IHKPK-HKLGEYMVRASESTLREVDVILFVVDATQKMGAGEQYILERIA--AVNTPVILA 127
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL+ ++ +E Y + V+P+SA + + I L GP YYP+D
Sbjct: 128 INKIDLVSRTDLLPVIETYNTAHSFNAVVPISALNRDNLPGLIGEIKKYLEAGPQYYPED 187
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+V++ PER + E+IREK+ R E+P+A V++ TR +++ I VE+ SQK
Sbjct: 188 MVTDQPERLVMAELIREKVLHMTREEIPHAIAVDMEEITTRNNGDLYVRAVIYVERESQK 247
Query: 353 IILIG 357
I+IG
Sbjct: 248 GIVIG 252
>gi|293400673|ref|ZP_06644818.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305699|gb|EFE46943.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 301
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 149/252 (59%), Gaps = 4/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG++A++G+PN GKSTL N ++ +K++I T KPQTTR+ I GI + + Q I DTP
Sbjct: 2 SYKSGFIAIIGRPNAGKSTLLNALLNEKIAITTPKPQTTRNNISGILTREDAQFIFTDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L + +N +A AD +VDA ++ DE L E + + +P L
Sbjct: 62 GIHKPK-HELGKTLNRNAYTAIAEADVNFWVVDATQSFGSGDEFLLEKI--KQSHIPCFL 118
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+LNK DL+ ++ + L+ +++ E+ PVSA + D+ + L GP ++P
Sbjct: 119 ILNKIDLLDKEKLIRTLQQWQERHTFAEIFPVSALQKDNLNDLLEVTKGYLEEGPKFFPD 178
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++VS+H E+F + EIIREK+ + EVP++ V V+ K F+Q IVVE+ SQ
Sbjct: 179 EMVSDHGEQFQIAEIIREKVLYKTNEEVPHSVAV-VIERKEETATAVFLQALIVVERTSQ 237
Query: 352 KIILIGKVSPFL 363
K ILIGK + +
Sbjct: 238 KAILIGKQAAMI 249
>gi|417544008|ref|ZP_12195094.1| GTP-binding protein Era [Acinetobacter baumannii OIFC032]
gi|421670646|ref|ZP_16110634.1| GTP-binding protein Era [Acinetobacter baumannii OIFC099]
gi|400381896|gb|EJP40574.1| GTP-binding protein Era [Acinetobacter baumannii OIFC032]
gi|410384184|gb|EKP36702.1| GTP-binding protein Era [Acinetobacter baumannii OIFC099]
Length = 342
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 159/286 (55%), Gaps = 21/286 (7%)
Query: 90 PDRNMASPDDYEIEEFDYASH-----PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVT 144
PD N + I++F ++S + KSG+VA++G+PNVGKSTL N ++GQKLSI +
Sbjct: 10 PDSNENQDPNNLIDQF-FSSKGVTIPSDFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITS 68
Query: 145 NKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD 204
KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA + + ++ ++D
Sbjct: 69 RKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEVRAINKMMNRAAHSALRDVNLVLFVID 128
Query: 205 ACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPV 263
A K + D +LE+ +P++LV+NK D EI ++ K + E++PV
Sbjct: 129 AQKWTQNDDLVLEKL---KNADMPVILVINKADTFGDKREILPLIQERAKLMNFAEIVPV 185
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SA G +E + + I LP P Y D +++ ERF EIIREKI Q E+PY
Sbjct: 186 SALRGANLEHLSETIEKYLPYQPPLYSFDQITDRSERFLASEIIREKIMRQLGEELPYDL 245
Query: 324 QVNVVSYKTRPT-----------AKDFIQVEIVVEKNSQKIILIGK 358
V + S+KT A +I I V++ QK I+IG+
Sbjct: 246 TVQIESFKTEEATVNEKTGRLKPACTYIDATIFVDRPGQKAIVIGE 291
>gi|225548173|ref|ZP_03769458.1| hypothetical protein RUMHYD_00152 [Blautia hydrogenotrophica DSM
10507]
gi|225040612|gb|EEG50858.1| ribosome biogenesis GTPase Era [Blautia hydrogenotrophica DSM
10507]
Length = 301
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 145/257 (56%), Gaps = 12/257 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N+KSG+VA++G+PNVGKSTL N +IGQK++I + KPQTTR+RI + + PE Q++ DTP
Sbjct: 4 NYKSGFVALIGRPNVGKSTLMNHLIGQKIAITSKKPQTTRNRIQTVYTSPEGQVVFLDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC----KAPERIDEILEEGVGDHKDKL 227
GI + K + L M++ D I+ LV+ RI + L+E L
Sbjct: 64 GIHKAK-NKLGEYMVQVAERTLKEVDVILWLVEPTTFVGAGERRIAQQLQEL------HL 116
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P++L++NK D ++ GEI + ++ Y + + DE+IP+SA DI + I LP GP
Sbjct: 117 PVILIINKVDTVEKGEILQAIDVYRRLYEFDEIIPISALRNRNTGDIMNCIFKYLPYGPQ 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVV 346
YY +D V++ P R EIIREK E+P+ V + K R + I I+
Sbjct: 177 YYDEDTVTDQPVRQIAAEIIREKSLHALDAEIPHGIAVAIDRMKDRGSGNLIDIDATIIC 236
Query: 347 EKNSQKIILIGKVSPFL 363
EK+S K I+IGK L
Sbjct: 237 EKDSHKGIIIGKQGAML 253
>gi|169795097|ref|YP_001712890.1| GTP-binding protein Era [Acinetobacter baumannii AYE]
gi|213158241|ref|YP_002320292.1| GTP-binding protein Era [Acinetobacter baumannii AB0057]
gi|301345823|ref|ZP_07226564.1| GTP-binding protein Era [Acinetobacter baumannii AB056]
gi|301594765|ref|ZP_07239773.1| GTP-binding protein Era [Acinetobacter baumannii AB059]
gi|417564397|ref|ZP_12215271.1| GTP-binding protein Era [Acinetobacter baumannii OIFC143]
gi|421623148|ref|ZP_16064037.1| GTP-binding protein Era [Acinetobacter baumannii OIFC074]
gi|421643983|ref|ZP_16084471.1| GTP-binding protein Era [Acinetobacter baumannii IS-235]
gi|421647341|ref|ZP_16087758.1| GTP-binding protein Era [Acinetobacter baumannii IS-251]
gi|421649601|ref|ZP_16089992.1| GTP-binding protein Era [Acinetobacter baumannii OIFC0162]
gi|421673169|ref|ZP_16113113.1| GTP-binding protein Era [Acinetobacter baumannii OIFC065]
gi|421689888|ref|ZP_16129561.1| GTP-binding protein Era [Acinetobacter baumannii IS-116]
gi|421695489|ref|ZP_16135096.1| GTP-binding protein Era [Acinetobacter baumannii WC-692]
gi|421700657|ref|ZP_16140170.1| GTP-binding protein Era [Acinetobacter baumannii IS-58]
gi|421794820|ref|ZP_16230911.1| GTP-binding protein Era [Acinetobacter baumannii Naval-21]
gi|421806840|ref|ZP_16242702.1| GTP-binding protein Era [Acinetobacter baumannii OIFC035]
gi|424059033|ref|ZP_17796524.1| GTP-binding protein Era [Acinetobacter baumannii Ab33333]
gi|425749746|ref|ZP_18867713.1| GTP-binding protein Era [Acinetobacter baumannii WC-348]
gi|445405987|ref|ZP_21431582.1| GTP-binding protein Era [Acinetobacter baumannii Naval-57]
gi|445447123|ref|ZP_21443610.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-92]
gi|445459978|ref|ZP_21447887.1| GTP-binding protein Era [Acinetobacter baumannii OIFC047]
gi|445490470|ref|ZP_21459183.1| GTP-binding protein Era [Acinetobacter baumannii AA-014]
gi|169148024|emb|CAM85887.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter baumannii AYE]
gi|193078015|gb|ABO12935.2| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter baumannii ATCC 17978]
gi|213057401|gb|ACJ42303.1| GTP-binding protein Era [Acinetobacter baumannii AB0057]
gi|395556153|gb|EJG22154.1| GTP-binding protein Era [Acinetobacter baumannii OIFC143]
gi|404565392|gb|EKA70560.1| GTP-binding protein Era [Acinetobacter baumannii IS-116]
gi|404565820|gb|EKA70983.1| GTP-binding protein Era [Acinetobacter baumannii WC-692]
gi|404569308|gb|EKA74395.1| GTP-binding protein Era [Acinetobacter baumannii IS-58]
gi|404669771|gb|EKB37663.1| GTP-binding protein Era [Acinetobacter baumannii Ab33333]
gi|408506658|gb|EKK08364.1| GTP-binding protein Era [Acinetobacter baumannii IS-235]
gi|408513605|gb|EKK15223.1| GTP-binding protein Era [Acinetobacter baumannii OIFC0162]
gi|408516446|gb|EKK18019.1| GTP-binding protein Era [Acinetobacter baumannii IS-251]
gi|408693757|gb|EKL39355.1| GTP-binding protein Era [Acinetobacter baumannii OIFC074]
gi|410386988|gb|EKP39448.1| GTP-binding protein Era [Acinetobacter baumannii OIFC065]
gi|410402757|gb|EKP54862.1| GTP-binding protein Era [Acinetobacter baumannii Naval-21]
gi|410417383|gb|EKP69153.1| GTP-binding protein Era [Acinetobacter baumannii OIFC035]
gi|425487148|gb|EKU53506.1| GTP-binding protein Era [Acinetobacter baumannii WC-348]
gi|444759351|gb|ELW83821.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-92]
gi|444765733|gb|ELW90022.1| GTP-binding protein Era [Acinetobacter baumannii AA-014]
gi|444773213|gb|ELW97309.1| GTP-binding protein Era [Acinetobacter baumannii OIFC047]
gi|444781765|gb|ELX05680.1| GTP-binding protein Era [Acinetobacter baumannii Naval-57]
Length = 342
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLEKL---KNADMPVIL 152
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|389843751|ref|YP_006345831.1| GTP-binding protein Era [Mesotoga prima MesG1.Ag.4.2]
gi|387858497|gb|AFK06588.1| GTP-binding protein Era [Mesotoga prima MesG1.Ag.4.2]
Length = 300
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 149/247 (60%), Gaps = 6/247 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG VA++GKPNVGKSTL N +IG+K++IV++KPQTTR+RI GI + + Q++ YDTPG
Sbjct: 4 KSGTVALVGKPNVGKSTLINTIIGEKIAIVSDKPQTTRNRIGGILTTKKGQIVFYDTPG- 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
I K +H L ++K S+ +D ++V+VD D ++ V ++ ++P+ L +
Sbjct: 63 IHKPLHRLGQYILKVATSSLAGSDLLLVIVDPTDGLRESDRLVANHV--NQSRIPVFLAI 120
Query: 234 NKKDLIKPGEIAKKLEWY--EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
NK D K + + + E F D+ +SAK G GVE++ + I LP G +P+
Sbjct: 121 NKVDEYKNERLLQDFQAKAEELFNDIRRTFLISAKKGDGVEELLETIFDFLPEGKMLFPE 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D++++ RF E+IREK+ R E+P++ V V + I+ +++VE++SQ
Sbjct: 181 DLITDRSSRFMASEVIREKVLQNTRQEIPHSVGVVVQEFSDEGNILK-IRADVIVERSSQ 239
Query: 352 KIILIGK 358
K I++GK
Sbjct: 240 KPIILGK 246
>gi|403514874|ref|YP_006655694.1| GTPase Era [Lactobacillus helveticus R0052]
gi|403080312|gb|AFR21890.1| GTPase Era [Lactobacillus helveticus R0052]
Length = 301
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDKMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I +L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEEIGKGDQYIANLLKEV------KIPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLNTINKYLPEGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VEK+
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLLIEATIYVEKDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|299471247|emb|CBN79102.1| PEra, plastid Era GTPase [Ectocarpus siliculosus]
Length = 382
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 149/270 (55%), Gaps = 29/270 (10%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ ++GYV ++G PNVGKSTL N MIG +LSIVT K TTRHRI GI +G ++QMI DTP
Sbjct: 69 DFRTGYVTIVGSPNVGKSTLMNNMIGDRLSIVTPKAGTTRHRITGIMTGDDFQMIYQDTP 128
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G++ +ML MM V+ A +AD I+ + D + +I E + K PI++
Sbjct: 129 GVLTPA-YMLHEGMMNFVQEAMGDADAILFVTDLFETEFANTQIFERMLAAGK---PIVV 184
Query: 232 VLNKKDLI-----------KPGEIAKKLE------------WYEKFTDVDEVIPVSAKYG 268
+NK DL+ +PG +A + W E+ V+P+SA G
Sbjct: 185 AVNKVDLLPSDGKSGDGPERPGLLAASTQKEVGSLKDVLGKWEERLPGAT-VLPISALEG 243
Query: 269 HGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVV 328
D+ + +P GP + D++S+ P+RFF EIIRE+IF + E+PY+C+V +
Sbjct: 244 INTVDLAGELKKHIPEGPPLFGTDVMSDKPQRFFAAEIIREQIFGSFSQEIPYSCEVLLG 303
Query: 329 SYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
+K R + I IVV + SQK ++IGK
Sbjct: 304 KFKER-MVETVIDATIVVSQESQKGMVIGK 332
>gi|418961430|ref|ZP_13513316.1| GTPase Era [Lactobacillus salivarius SMXD51]
gi|380343962|gb|EIA32309.1| GTPase Era [Lactobacillus salivarius SMXD51]
Length = 300
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 144/240 (60%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I GI + Q++ DTP
Sbjct: 4 NFHSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDNAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+++ S D ++ +V+A + R D+ + E + + K PI L
Sbjct: 64 GI-HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P ++ + ++ Y D EV P+SA + ++ + ++ +P GP YYP
Sbjct: 121 VINKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALERNNCPELIESLVNTVPEGPQYYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPERF GE+IREK+ R EVP++ V V K +Q IVVE+NSQ
Sbjct: 181 DQITDHPERFIAGELIREKVLELTREEVPHSVAVVVDRIHREDDEKVLVQATIVVERNSQ 240
>gi|332875944|ref|ZP_08443730.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059]
gi|385238510|ref|YP_005799849.1| GTP-binding protein Era [Acinetobacter baumannii TCDC-AB0715]
gi|416145058|ref|ZP_11600175.1| GTP-binding protein Era [Acinetobacter baumannii AB210]
gi|323519011|gb|ADX93392.1| GTP-binding protein Era [Acinetobacter baumannii TCDC-AB0715]
gi|332735810|gb|EGJ66851.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059]
gi|333367174|gb|EGK49188.1| GTP-binding protein Era [Acinetobacter baumannii AB210]
Length = 340
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 34 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 93
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P++L
Sbjct: 94 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAQKWTQNDDLVLEKL---KNADMPVIL 150
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 151 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 210
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 211 IDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 270
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 271 IDATIFVDRPGQKAIVIGE 289
>gi|238854658|ref|ZP_04644988.1| GTP-binding protein Era [Lactobacillus jensenii 269-3]
gi|260664399|ref|ZP_05865251.1| GTP-binding protein Era [Lactobacillus jensenii SJ-7A-US]
gi|313472197|ref|ZP_07812689.1| GTP-binding protein Era [Lactobacillus jensenii 1153]
gi|238832448|gb|EEQ24755.1| GTP-binding protein Era [Lactobacillus jensenii 269-3]
gi|239529577|gb|EEQ68578.1| GTP-binding protein Era [Lactobacillus jensenii 1153]
gi|260561464|gb|EEX27436.1| GTP-binding protein Era [Lactobacillus jensenii SJ-7A-US]
Length = 302
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 146/253 (57%), Gaps = 10/253 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK+ I +NKPQTTR++I GI + Q + DTPGI
Sbjct: 8 KSGFVALIGRPNVGKSTLMNHLIGQKVVITSNKPQTTRNKISGIFTTDNLQAVFVDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPIL 230
+ K + LD M K S+ + D + +V+ K E I ++L K K P+
Sbjct: 68 HKPK-NKLDDYMDKASLSSLNDVDLVFFMVEPEKVGKGDEYIADLLS------KVKAPVF 120
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + P + +E Y+K E++P+SA G+ +ED+ + LP GP +Y
Sbjct: 121 LIINKIDQVHPDALLPVIESYQKLGKFAEIVPISATNGNNMEDLISTLYKYLPEGPQFYG 180
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++ PE F V E+IRE+I + E+P+A V V R K ++ I VE++
Sbjct: 181 SDEVTDRPEYFVVAELIREQILRLTQQEIPHATAVVVDRMNERINGKLQVEATIYVERDG 240
Query: 351 QKIILIGKVSPFL 363
QK I+IG+ L
Sbjct: 241 QKKIIIGRGGSML 253
>gi|302345899|ref|YP_003814252.1| GTP-binding protein Era [Prevotella melaninogenica ATCC 25845]
gi|302149370|gb|ADK95632.1| GTP-binding protein Era [Prevotella melaninogenica ATCC 25845]
Length = 293
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDTQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADILLYVTDVVEDPEKNMDFLEKV---SKMSIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + + E++P+SAK GV+ + + LP PA++ KD
Sbjct: 118 INKIDESDQKTLGNLVTKWHGLLPNAEILPISAKNKFGVDILLKRVHELLPESPAFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y E+PY+ +V + +K + I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEIPYSVEVVIERFK-EDDRQIHISAIIYVERSSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|332851054|ref|ZP_08433163.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150]
gi|332869697|ref|ZP_08438885.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113]
gi|332730218|gb|EGJ61543.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150]
gi|332732599|gb|EGJ63832.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113]
Length = 340
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 34 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 93
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P++L
Sbjct: 94 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLEKL---KNADMPVIL 150
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 151 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 210
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 211 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 270
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 271 IDATIFVDRPGQKAIVIGE 289
>gi|170017070|ref|YP_001727989.1| GTP-binding protein Era [Leuconostoc citreum KM20]
gi|414596359|ref|ZP_11445934.1| GTPase Era [Leuconostoc citreum LBAE E16]
gi|421876320|ref|ZP_16307878.1| GTPase Era [Leuconostoc citreum LBAE C10]
gi|421878069|ref|ZP_16309552.1| GTPase Era [Leuconostoc citreum LBAE C11]
gi|226741222|sp|B1MYE3.1|ERA_LEUCK RecName: Full=GTPase Era
gi|169803927|gb|ACA82545.1| GTP-binding protein Era [Leuconostoc citreum KM20]
gi|372557841|emb|CCF23998.1| GTPase Era [Leuconostoc citreum LBAE C10]
gi|390447944|emb|CCF25672.1| GTPase Era [Leuconostoc citreum LBAE C11]
gi|390482821|emb|CCF27995.1| GTPase Era [Leuconostoc citreum LBAE E16]
Length = 303
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 153/250 (61%), Gaps = 11/250 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L + M+K+ SA AD I +VDA R D+ + + + + PI L++
Sbjct: 67 -HKPQNSLGNFMVKSAFSALHEADAIWFVVDASMPRGRGDDFIISRLNEVTET-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVD-----EVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
NK DLI E+ +E Y+ VD EV P+SA G V ++ D +++ L GP Y
Sbjct: 125 NKVDLIAREELLAIIESYQ----VDAPTWTEVFPISATEGDNVPELLDNVVSHLDEGPQY 180
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
+ D +++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+
Sbjct: 181 FDADQLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKIAREDEEKIHIQASIIVER 240
Query: 349 NSQKIILIGK 358
+QK I+IGK
Sbjct: 241 PTQKNIIIGK 250
>gi|335357402|ref|ZP_08549272.1| GTPase Era [Lactobacillus animalis KCTC 3501]
Length = 300
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 143/237 (60%), Gaps = 3/237 (1%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG++A++G+PNVGKST N ++GQK++I+++K QTTR++I G+ + Q++ DTPGI
Sbjct: 7 SGFIAIVGRPNVGKSTFLNNVVGQKIAIMSDKAQTTRNKIQGVYTTDNAQIVFIDTPGI- 65
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLN 234
K L M+K+ S D ++ +V+A + R D+ + E + + K PI LV+N
Sbjct: 66 HKPHSRLGDFMVKSALSTLNEVDAVIFMVNAEQKRGRGDDFIIERLKNVKK--PIYLVIN 123
Query: 235 KKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
K D I P + + ++ Y D +V P+SA G+ ++ ++ LP GP YYP+D V
Sbjct: 124 KIDKIHPDHLLEVMDDYRDTLDYKDVFPISALNGNNCAELVHDLVEDLPEGPQYYPEDQV 183
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
++HPERF V E+IREK+ R EVP++ V V K K IQ IVVE++SQ
Sbjct: 184 TDHPERFIVSELIREKVLQLTREEVPHSVAVVVDRIKREDDEKVLIQATIVVERSSQ 240
>gi|322385835|ref|ZP_08059478.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
gi|417922582|ref|ZP_12566070.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
gi|321270120|gb|EFX53037.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
gi|342832679|gb|EGU66974.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100]
Length = 299
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK+ I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIVIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVEAAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + + D E++P+SA G+ V + D + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRQQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGSML 251
>gi|417934378|ref|ZP_12577698.1| GTP-binding protein Era [Streptococcus mitis bv. 2 str. F0392]
gi|340770948|gb|EGR93463.1| GTP-binding protein Era [Streptococcus mitis bv. 2 str. F0392]
Length = 299
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFCNQMDFKEIVPISALQGNNVSHLIDILSENLEEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|293365236|ref|ZP_06611953.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
gi|307703775|ref|ZP_07640716.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
gi|291316686|gb|EFE57122.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
gi|307622610|gb|EFO01606.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037]
Length = 299
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ + + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIDRL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|392427201|ref|YP_006468195.1| GTP-binding protein Era [Desulfosporosinus acidiphilus SJ4]
gi|391357164|gb|AFM42863.1| GTP-binding protein Era [Desulfosporosinus acidiphilus SJ4]
Length = 304
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 151/254 (59%), Gaps = 12/254 (4%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
S + +SG+V+V+G+PN GKSTL N ++GQK+ I+++KPQTTR+RI I + Q++
Sbjct: 4 TSTKDFRSGFVSVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEKRGQIVF 63
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDH 223
DTPGI + K H L M+ + + D I+ +VD E I E+L+
Sbjct: 64 LDTPGIHKPK-HKLGEYMVGAAKESMREVDAIIYMVDLSSDYGSGEEYIIEMLKH----- 117
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K P++LVLNK DL+ ++ K++ + + ++P+SAK G +++ + I +P
Sbjct: 118 -TKTPVVLVLNKVDLLGKEQLVHKIQQFSALAEFKAIVPISAKTGENTDELLNVIFNLMP 176
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YYP+D V++ PERF + E+IREK+ R+E+P++ V + + + + I+
Sbjct: 177 KGPMYYPEDEVTDQPERFIMAELIREKVLQLTRDEIPHSIAVVIEEVQEKKSLVK-IRAL 235
Query: 344 IVVEKNSQKIILIG 357
I+VE+ SQK I+IG
Sbjct: 236 IIVERESQKGIVIG 249
>gi|288803891|ref|ZP_06409316.1| GTP-binding protein Era [Prevotella melaninogenica D18]
gi|288333656|gb|EFC72106.1| GTP-binding protein Era [Prevotella melaninogenica D18]
Length = 293
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL NQ++G+KLSI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDTQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ M MM++ SA +AD ++ + D + PE+ + LE+ K +P++L+
Sbjct: 62 VLKPNYKM-QEMMLQFSESALADADILLYVTDVVEDPEKNMDFLEKV---SKMSIPVILL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + + + E++P+SAK GV+ + + LP PA++ KD
Sbjct: 118 INKIDESDQKTLGNLVTKWHGLLPNAEILPISAKNKFGVDILLRRVHELLPESPAFFDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P +FFV EIIREKI Y E+PY+ +V + +K + I I VE++SQK
Sbjct: 178 QLTDKPAKFFVSEIIREKILRYYDKEIPYSVEVVIERFK-EDDRQIHISAIIYVERSSQK 236
Query: 353 IILIG 357
I+IG
Sbjct: 237 GIIIG 241
>gi|257453601|ref|ZP_05618891.1| GTP-binding protein Era [Enhydrobacter aerosaccus SK60]
gi|257449059|gb|EEV24012.1| GTP-binding protein Era [Enhydrobacter aerosaccus SK60]
Length = 349
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 150/265 (56%), Gaps = 21/265 (7%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A + ++GYVA++G+PNVGKSTL N ++GQKLSI + KPQTTRHRI+GI + + Q I
Sbjct: 42 ARAVDFRTGYVAIVGRPNVGKSTLMNHVLGQKLSITSRKPQTTRHRIMGILTNEQLQAIF 101
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPGI +++ ++ M K A + D ++ ++D+ K E DE++ V + +
Sbjct: 102 VDTPGIHSREVRAINERMNKAATLALADVDAVLFVIDSLKWVED-DELVFAKVQNL--GV 158
Query: 228 PILLVLNKKDLIKPG----EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
P++ V+NK D IK + +KL + F+D ++PVSA H ++++ I LP
Sbjct: 159 PVIAVINKSDTIKDEAQLFALLQKLHDTQVFSD---IVPVSALRAHNLDELVRVIGKHLP 215
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD----- 338
+ Y + V++ ERF EIIREK+ +E+PY V + ++K P +D
Sbjct: 216 IAAPIYDAEQVTDRSERFLASEIIREKVMRASGDEIPYDLTVQIDTFKDEPAHQDPKTGK 275
Query: 339 ------FIQVEIVVEKNSQKIILIG 357
FI I VE+ QK+I+IG
Sbjct: 276 WRKAVTFIDATIFVERQGQKVIVIG 300
>gi|410668587|ref|YP_006920958.1| GTP-binding protein Era [Thermacetogenium phaeum DSM 12270]
gi|409106334|gb|AFV12459.1| GTP-binding protein Era [Thermacetogenium phaeum DSM 12270]
Length = 279
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 126 VGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMM 185
+GKSTL N+ +G+K++IV++KPQTTR+RILGI + + Q + DTPGI K H L + M
Sbjct: 1 MGKSTLLNRFVGRKVAIVSDKPQTTRNRILGILTTEDAQAVFIDTPGI-HKPRHKLGAYM 59
Query: 186 MKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIA 245
+ ++ D ++ +VDA P +E + + + P++L LNK DL+K E+
Sbjct: 60 TRIAQNTLEEVDLVLYVVDASVPPGAGEEYILALL--RRVSTPVILALNKIDLVKKQELL 117
Query: 246 KKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGE 305
+EW+ + + EVIPVSA G +E + IL LP GP YYP ++V++ PERF E
Sbjct: 118 PLIEWFSERGNFLEVIPVSALTGENIESLNRSILENLPEGPFYYPVEMVTDQPERFIAAE 177
Query: 306 IIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
IIREK+ R EVP++ V V + RP ++ + VE++SQK ILIGK
Sbjct: 178 IIREKVLNLTREEVPHSVVVVVEDMQERPNGMLYLAAVVYVERDSQKGILIGK 230
>gi|229828496|ref|ZP_04454565.1| hypothetical protein GCWU000342_00558 [Shuttleworthia satelles DSM
14600]
gi|229793090|gb|EEP29204.1| hypothetical protein GCWU000342_00558 [Shuttleworthia satelles DSM
14600]
Length = 310
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 157/265 (59%), Gaps = 7/265 (2%)
Query: 102 IEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 161
+E+ D +P KSG+VA++G+PNVGKSTL NQ+IGQK++I +NKPQTTR+RI + + P
Sbjct: 1 MEKRDSMKNPVTKSGFVAMIGRPNVGKSTLMNQLIGQKIAITSNKPQTTRNRIQTVYTDP 60
Query: 162 EY-QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEG 219
+ Q++ DTPGI + K + L M+ + + D I+ L++ D IL+E
Sbjct: 61 DRGQIVFLDTPGIHQAK-NKLGQYMVGVAERSMKDVDLILWLIEPDTRVGGGDRHILKEL 119
Query: 220 VGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWIL 279
+ ++P+ LV+NK D++K +I ++ Y D DE++PV A+ G G +D+ + I
Sbjct: 120 ---EQIQIPVFLVINKIDMVKKEKILAVIDTYRGEYDFDEILPVCARSGDGCKDLIESIF 176
Query: 280 TKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF 339
++LP GP +Y +D V++ P R EIIREK EVP+ V + K RP + +
Sbjct: 177 SRLPQGPMFYDEDTVTDQPMRQIAAEIIREKALYALDKEVPHGIAVAMDVMKRRPGRELW 236
Query: 340 -IQVEIVVEKNSQKIILIGKVSPFL 363
I+ I+ E+ S K I+IGK L
Sbjct: 237 DIEATIICERESHKGIIIGKRGAML 261
>gi|226311653|ref|YP_002771547.1| GTP-binding protein [Brevibacillus brevis NBRC 100599]
gi|226094601|dbj|BAH43043.1| probable GTP-binding protein [Brevibacillus brevis NBRC 100599]
Length = 305
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 148/251 (58%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N ++G K++I++NKPQTTR++I + + E Q+I DTPGI
Sbjct: 11 KSGFVSIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEEGQIIFLDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L + M+ + D ++ +VDA + D+ + E + + K P+ LV+
Sbjct: 71 -HKPQSKLGNYMVSVAENTLNEVDLVLFVVDATEKRGAGDDYIIERL--KQVKTPVFLVI 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P + ++ Y K D +++P+SA G+ ++ IL ++ GP YYP D
Sbjct: 128 NKIDKVHPEALLPIIDDYRKLYDFKQIVPISALEGNNTASLQQAILGEMEEGPMYYPADQ 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQK 352
V++HPERF E+IREK+ R EVP++ V + K K +I I VE++SQ+
Sbjct: 188 VTDHPERFVAAELIREKVLHLTREEVPHSIAVVIEEMKRGENGKTLYIYAAIYVERDSQR 247
Query: 353 IILIGKVSPFL 363
ILIG+ L
Sbjct: 248 GILIGQKGQML 258
>gi|384132809|ref|YP_005515421.1| era [Acinetobacter baumannii 1656-2]
gi|322509029|gb|ADX04483.1| era [Acinetobacter baumannii 1656-2]
Length = 340
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 159/286 (55%), Gaps = 21/286 (7%)
Query: 90 PDRNMASPDDYEIEEFDYASH-----PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVT 144
PD N + I++F ++S + KSG+VA++G+PNVGKSTL N ++GQKLSI +
Sbjct: 8 PDSNENQDPNNLIDQF-FSSKGVTIPSDFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITS 66
Query: 145 NKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD 204
KPQTTRH+I+GI S + Q + DTPG+ +K++ ++ MM + SA + + ++ ++D
Sbjct: 67 RKPQTTRHKIIGIDSCEKMQAVYVDTPGMHKKEVRAINKMMNRAAHSALRDVNLVLFVID 126
Query: 205 ACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPV 263
A K + D +LE+ +P++LV+NK D EI ++ K + E++PV
Sbjct: 127 AQKWTQNDDLVLEKL---KNADMPVILVINKADTFGDKREILPLIQERAKLMNFAEIVPV 183
Query: 264 SAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYAC 323
SA G +E + + I LP P Y D +++ ERF EIIREKI Q E+PY
Sbjct: 184 SALRGANLEHLSETIEKYLPYQPPLYSIDQITDRSERFLASEIIREKIMRQLGEELPYDL 243
Query: 324 QVNVVSYKTRPT-----------AKDFIQVEIVVEKNSQKIILIGK 358
V + S+KT A +I I V++ QK I+IG+
Sbjct: 244 TVQIESFKTEEATVNEKTGRLKPACTYIDATIFVDRPGQKAIVIGE 289
>gi|326203513|ref|ZP_08193377.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782]
gi|325986333|gb|EGD47165.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782]
Length = 298
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 153/254 (60%), Gaps = 7/254 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG+V+V+G+PNVGKSTL N + GQK++I+++KPQTTR+ I G+ + E Q+IL DTP
Sbjct: 2 SYKSGFVSVIGRPNVGKSTLLNTITGQKIAIMSDKPQTTRNTIRGVITNKECQLILIDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERID-EILEEGVGDHKDKLPI 229
GI + K + + M+ NV S I D ++ LV+A P D I+++ + K P+
Sbjct: 62 GIHKPKTKLGEYMV--NVASETIKEVDLVLFLVEANAQPGAQDINIIQQL---KQVKTPV 116
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L+LNK DL+ ++ ++ Y K + +IP+SA G++ I L +P GP ++
Sbjct: 117 FLILNKVDLVSKEKLLAIIDSYSKLMNFKAIIPISALKNDGIDIILKEALDLIPEGPQFF 176
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
+D++++ PE+ E+IREK+ + +EVP+ V V S+K R IQ I EK+
Sbjct: 177 SEDMLTDQPEKVIAAEMIREKVLLNLDDEVPHGVGVEVTSFKEREDGLINIQATIYCEKS 236
Query: 350 SQKIILIGKVSPFL 363
+ K I+IGK L
Sbjct: 237 THKGIIIGKQGSML 250
>gi|349700037|ref|ZP_08901666.1| GTPase Era [Gluconacetobacter europaeus LMG 18494]
Length = 304
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 134/245 (54%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA++G PN GKSTL N+M G KLSIV+ K QTTR R+LGI Q++L DTPGI
Sbjct: 11 RCGFVAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRDRTQILLVDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ + LD M+ + +AD +++VDA + + + K +L LVL
Sbjct: 71 FQPR-RKLDRAMVAAAWTGSEDADITLLIVDARAGMTDALRAIATRLAEQKRRL--WLVL 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL++ + V+ V VSA+ G GV+D+ D + L GP YP+D
Sbjct: 128 NKTDLVRRDALLPLTAELSAILPVEHVFMVSARSGEGVDDLLDRLAADLSAGPYLYPEDD 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R E++RE+IF+Q EVPYA + RP I V I V + S K
Sbjct: 188 LTDLPDRLLAAELVREQIFLQTHEEVPYAATAETEGFAERPDGSVRIDVTIYVARGSHKA 247
Query: 354 ILIGK 358
ILIG+
Sbjct: 248 ILIGE 252
>gi|21673128|ref|NP_661193.1| GTP-binding protein Era [Chlorobium tepidum TLS]
gi|21646203|gb|AAM71535.1| GTP-binding protein, Era/ThdF family [Chlorobium tepidum TLS]
Length = 305
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 153/259 (59%), Gaps = 16/259 (6%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P G+V +G PN GKSTL N+++ KLSIVT KPQTTR +I GI Q+I+ DT
Sbjct: 4 PLFSCGHVTFVGAPNAGKSTLLNRLLDHKLSIVTPKPQTTRKKITGIYHDDRSQIIILDT 63
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERID-----EILEEGVGDHKD 225
PGI++ K + +SM+ RS +D IV L+ K E ID E++E+ V
Sbjct: 64 PGIMDPKQSLHESMLEITRRSLR-ESDVIVALIPFQKGDEPIDRKFASELIEQWVKPTGK 122
Query: 226 KLPILLVLNKKDLIKPGEIAK--KLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
P ++ LNK DL+ P E AK + E K+ V + +SA G + ++ + + LP
Sbjct: 123 --PFVIALNKADLV-PEETAKEAQTEIISKYKPV-ATLALSALTGGNIPELVELLRPLLP 178
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR----PTAKDF 339
+P DI+S PERFFVGEIIREKIF+QY E+PY+ +V + +K + P+ K+
Sbjct: 179 FDEPIWPDDILSTEPERFFVGEIIREKIFLQYGREIPYSTEVVIDEFKEQHENNPSRKEL 238
Query: 340 IQVEIVVEKNSQKIILIGK 358
I+ ++VE+NSQK I++G+
Sbjct: 239 IRCSVIVERNSQKQIIVGQ 257
>gi|342732211|ref|YP_004771050.1| GTP-binding protein Era [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417966028|ref|ZP_12607470.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-4]
gi|417968350|ref|ZP_12609379.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-co]
gi|418016387|ref|ZP_12655952.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372465|ref|ZP_12964557.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329666|dbj|BAK56308.1| GTP-binding protein Era [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506722|gb|EGX29016.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|380335332|gb|EIA25550.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-4]
gi|380339865|gb|EIA28533.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-co]
gi|380342134|gb|EIA30579.1| GTP-binding protein [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 294
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 144/252 (57%), Gaps = 4/252 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+ NVGKSTL N I QKLSIV++KPQTTR+ ++GI + +YQ++ DTPG
Sbjct: 2 HKSGFVSIVGRANVGKSTLLNNFINQKLSIVSSKPQTTRNNVIGILNNDDYQIVFTDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
K + L M+K++ S D I+ + + K ++D + + + D +P + V
Sbjct: 62 -YHKPRYKLGDYMIKSISSGLKETDVIIFVANIRKEIPKLDLEILDKIKDL--SIPRIFV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D I +I L Y K + DE IP+SA G + + + IL LP GP YY D
Sbjct: 119 LNKCDEISSKDIMDTLSKYSKIVNFDEYIPISALNGKNINKLLELILKYLPNGPKYYDSD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
+ + E+FF+ EI+REKI +EVP+ V ++S K + I+ I +K +
Sbjct: 179 WTATNNEKFFISEIVREKILKLIHDEVPHGVGVEIISMKYDDQKNRYNIEGNIFCDKETH 238
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 239 KAIIIGKNGDML 250
>gi|417549647|ref|ZP_12200727.1| GTP-binding protein Era [Acinetobacter baumannii Naval-18]
gi|421626604|ref|ZP_16067433.1| GTP-binding protein Era [Acinetobacter baumannii OIFC098]
gi|400387615|gb|EJP50688.1| GTP-binding protein Era [Acinetobacter baumannii Naval-18]
gi|408695875|gb|EKL41430.1| GTP-binding protein Era [Acinetobacter baumannii OIFC098]
Length = 342
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLEKL---KNADMPVIL 152
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLSSEIIREKIMRQLGEELPYDLTVQIESFKTEEATINEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|335029848|ref|ZP_08523350.1| GTP-binding protein Era [Streptococcus infantis SK1076]
gi|334267990|gb|EGL86440.1| GTP-binding protein Era [Streptococcus infantis SK1076]
Length = 299
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K + K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEESDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIVIGKGGAML 251
>gi|431794885|ref|YP_007221790.1| GTP-binding protein Era [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430785111|gb|AGA70394.1| GTP-binding protein Era [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 303
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 155/252 (61%), Gaps = 6/252 (2%)
Query: 108 ASHPNH--KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 165
S PN +SG+V V+G+PN GKSTL NQ++GQK+ I+++KPQTTR++I I + Q+
Sbjct: 3 GSKPNEEFRSGFVTVIGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQV 62
Query: 166 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 225
I DTPGI + K H L M+ + + D I+ +VD +E + E + +
Sbjct: 63 IFLDTPGIHKPK-HKLGEFMVDSALESLREVDLILYMVDVTAEFGPGEEYILENL--KQI 119
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P +LVLNK DLI+ ++ KK++ + D +IP+SAK G E++ I +LP G
Sbjct: 120 KTPCILVLNKIDLIEKDKLLKKIKDFSALKDFLAIIPLSAKTGENKEELLKIIFKELPKG 179
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D V++ PERF + E++REK+ R+EVP++ V V S + + T ++ IV
Sbjct: 180 PMYYPEDEVTDQPERFIMAELVREKVLQLTRDEVPHSIAVLVESVEEKKTLVK-VRAVIV 238
Query: 346 VEKNSQKIILIG 357
VE++SQK I+IG
Sbjct: 239 VERDSQKGIIIG 250
>gi|421660986|ref|ZP_16101168.1| GTP-binding protein Era [Acinetobacter baumannii Naval-83]
gi|408703595|gb|EKL48990.1| GTP-binding protein Era [Acinetobacter baumannii Naval-83]
Length = 342
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLEKL---KNADMPVIL 152
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEETVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|406576440|ref|ZP_11052069.1| GTPase Era [Streptococcus sp. GMD6S]
gi|404461447|gb|EKA07378.1| GTPase Era [Streptococcus sp. GMD6S]
Length = 299
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P +
Sbjct: 121 NKIDKVHPDQLLAQIDDFRNQMDFKEIVPISALQGNNVSRLIDILSENLEEGFQYFPSNQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|372325335|ref|ZP_09519924.1| GTP-binding protein [Oenococcus kitaharae DSM 17330]
gi|366984143|gb|EHN59542.1| GTP-binding protein [Oenococcus kitaharae DSM 17330]
Length = 305
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 150/248 (60%), Gaps = 5/248 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I+++K QTTR++I GI + Q++ DTPG
Sbjct: 6 KSGFVAIIGRPNVGKSTLINYIVGQKIAIISSKAQTTRNKIAGIYTTDNAQVVFLDTPG- 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
I K + LD M K A AD ++ +VDA + D+ + + K+ PI L++
Sbjct: 65 IHKPHNSLDQYMEKASLGALNEADAVLFVVDASEKRGLGDDFIINRLKQIKNT-PIYLLV 123
Query: 234 NKKDLIK-PGEIAKKLEWYE-KFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
NK DLIK ++ + Y D EV P+SA G V D+ + I+ KL GP Y+ K
Sbjct: 124 NKIDLIKNKNDLFNTINSYTVNAIDWSEVYPISALSGEQVPDLVENIIGKLNPGPQYFDK 183
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR-PTAKDFIQVEIVVEKNS 350
D V++HPERF V E+IREKI EVP++ V + S K AK IQ I+VE+ S
Sbjct: 184 DQVTDHPERFLVSELIREKILQLTEQEVPHSIAVVIDSMKKDGENAKLHIQASIIVERAS 243
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 244 QKNIIIGK 251
>gi|94266754|ref|ZP_01290422.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [delta proteobacterium MLMS-1]
gi|94270658|ref|ZP_01291794.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [delta proteobacterium MLMS-1]
gi|93450717|gb|EAT01793.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [delta proteobacterium MLMS-1]
gi|93452576|gb|EAT03153.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [delta proteobacterium MLMS-1]
Length = 299
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 144/249 (57%), Gaps = 15/249 (6%)
Query: 116 GYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIE 175
G+VA++G PN GKSTL N+++GQK++IVT KPQTTR+RILG+ + +YQM+L DTPG+
Sbjct: 12 GFVALIGAPNAGKSTLLNRLLGQKIAIVTPKPQTTRNRILGVVNHRDYQMVLLDTPGLHR 71
Query: 176 KKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL------PI 229
K + L+S M++ R+A D + LVD E H KL P
Sbjct: 72 AK-NRLNSEMVRLARNAAGEVDVVAYLVDVSSETEAEQR-------RHAQKLLREAGKPA 123
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LL+ NK D I ++ + +++ +IP+SA G G + LP GP +
Sbjct: 124 LLLGNKIDRIGKEKLLPLIAAWQEVYPFQAIIPLSALTGEGCQLFLTEASRLLPTGPRLF 183
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+DI ++ ERF GEIIREKI + R+E+PY+ V + + +P IQ I+VEK+
Sbjct: 184 PEDIPTDASERFICGEIIREKIMLLTRDELPYSVAVVIDQFMEKP-GMTTIQATIMVEKD 242
Query: 350 SQKIILIGK 358
SQK I+IGK
Sbjct: 243 SQKGIVIGK 251
>gi|256851187|ref|ZP_05556576.1| GTP-binding protein Era [Lactobacillus jensenii 27-2-CHN]
gi|260660611|ref|ZP_05861526.1| GTP-binding protein Era [Lactobacillus jensenii 115-3-CHN]
gi|297206052|ref|ZP_06923447.1| GTP-binding protein Era [Lactobacillus jensenii JV-V16]
gi|256616249|gb|EEU21437.1| GTP-binding protein Era [Lactobacillus jensenii 27-2-CHN]
gi|260548333|gb|EEX24308.1| GTP-binding protein Era [Lactobacillus jensenii 115-3-CHN]
gi|297149178|gb|EFH29476.1| GTP-binding protein Era [Lactobacillus jensenii JV-V16]
Length = 302
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 145/253 (57%), Gaps = 10/253 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK+ I +NK QTTR++I GI + Q + DTPGI
Sbjct: 8 KSGFVALIGRPNVGKSTLMNHLIGQKVVITSNKSQTTRNKISGIFTTENLQAVFVDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLPIL 230
K + LD M K S+ + D + +V+ K E I ++L K K+PI
Sbjct: 68 -HKPQNKLDDYMDKASLSSLNDVDLVFFMVEPEKVGKGDEYIADLLS------KVKVPIF 120
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
L++NK D + P + +E Y+K E++P+SA G+ +ED+ + LP GP +Y
Sbjct: 121 LIINKIDQVHPDSLLPVIESYQKLGKFAEIVPISATNGNNMEDLVATLYKYLPEGPQFYG 180
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++ PE F V E+IRE+I + E+P+A V V R K ++ I VE++
Sbjct: 181 SDEVTDRPEYFVVAELIREQILRLTQQEIPHATAVVVERMNQRINGKLQVEATIYVERDG 240
Query: 351 QKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 241 QKKIIIGKGGSML 253
>gi|357238130|ref|ZP_09125467.1| GTP-binding protein Era [Streptococcus ictaluri 707-05]
gi|356752853|gb|EHI69974.1| GTP-binding protein Era [Streptococcus ictaluri 707-05]
Length = 299
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVIFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P ++ ++++ + D E++P+SA G+ V + + + L G Y+P+D
Sbjct: 121 NKIDKIHPDQLLEQIDDFRSQMDFKEIVPISATQGNNVNRLMEILKANLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + EVP++ V V S K T K I+ ++VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTKQEVPHSVAVVVESMKRDDETDKVHIRATVMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|326692993|ref|ZP_08229998.1| GTPase [Leuconostoc argentinum KCTC 3773]
Length = 303
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 149/246 (60%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA R D+ + + + KD PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVVDASMPRGRGDDFIISRLKEVKDT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ E+ ++ Y E EV P+SA G V ++ I+ L GP Y+ D
Sbjct: 125 NKVDLVTADELLDVIQSYQEDAPTWAEVFPISATEGDNVPELLGNIVESLEEGPQYFDSD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R E+P++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEIPHSVAVVIDKIARESEDKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|147677230|ref|YP_001211445.1| GTPase [Pelotomaculum thermopropionicum SI]
gi|146273327|dbj|BAF59076.1| GTPase [Pelotomaculum thermopropionicum SI]
Length = 300
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 146/252 (57%), Gaps = 17/252 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+ NVGKSTL N ++G+K++I++ KPQTTR++IL + + + Q++ DTPG
Sbjct: 7 RSGFVAIIGRTNVGKSTLLNSLLGRKVAIMSEKPQTTRNKILCVLTREDAQVVFLDTPGF 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 226
+ K H L +++ D ++ LV+A + P G GDH K
Sbjct: 67 HKPK-HKLGEHLVQVALRTLKEVDLVLFLVEAGQPP---------GPGDHYVIKQFAGLK 116
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+LLV+NK DL++ E+ +E Y E++PVSA G + + + ++ LP GP
Sbjct: 117 TPVLLVINKIDLVRREELLPLIEQYSGLFGFAEIVPVSALTGENLPRLLEVVVRYLPAGP 176
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YYP+D++++ PE F + E+IREK+ EVP++ V V K RP ++ I
Sbjct: 177 KYYPEDVITDRPESFIMAELIREKVLHLTSQEVPHSVAVVVEELKERPNNVVAVRAVIYT 236
Query: 347 EKNSQKIILIGK 358
EK SQK ILIGK
Sbjct: 237 EKESQKGILIGK 248
>gi|421664270|ref|ZP_16104410.1| GTP-binding protein Era [Acinetobacter baumannii OIFC110]
gi|408712567|gb|EKL57750.1| GTP-binding protein Era [Acinetobacter baumannii OIFC110]
Length = 342
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLEKL---KNADMPVIL 152
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGVNLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|417573118|ref|ZP_12223972.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC-5]
gi|421802055|ref|ZP_16238009.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC1]
gi|400208686|gb|EJO39656.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC-5]
gi|410404443|gb|EKP56510.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC1]
Length = 342
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ +P+++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLEKL---KNADMPVIM 152
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|395242368|ref|ZP_10419365.1| GTP-binding protein Era [Lactobacillus pasteurii CRBIP 24.76]
gi|394480100|emb|CCI85605.1| GTP-binding protein Era [Lactobacillus pasteurii CRBIP 24.76]
Length = 302
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 142/238 (59%), Gaps = 4/238 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I +NKPQTTR+RI GI S + Q++ DTPGI
Sbjct: 8 KSGFVALVGRPNVGKSTLMNRLVGEKIAITSNKPQTTRNRISGIYSADDMQVVFIDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K LD M K S+ + D ++ +V+ A R D+ + E + K +P+ LV+
Sbjct: 68 F-KPHSKLDDYMGKASFSSFNDVDLVLFMVEPEVAG-RGDQFIAEEL--KKASVPVFLVI 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ + ++ Y K + E +PVSA G GV D+ D + L GP YY D
Sbjct: 124 NKVDQVHPDKLLEVIDSYRKLGNFMEFLPVSATEGIGVSDLIDSLYKNLEPGPQYYSSDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++ PE F V E+IRE+I EVP+A V V R K I+ I VE++ Q
Sbjct: 184 ITDRPEYFVVAELIREQILQLTDQEVPHATAVAVERMNQRVNGKLQIEANIYVERDGQ 241
>gi|242242840|ref|ZP_04797285.1| GTP-binding protein Era, partial [Staphylococcus epidermidis
W23144]
gi|242233703|gb|EES36015.1| GTP-binding protein Era [Staphylococcus epidermidis W23144]
Length = 208
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 133/208 (63%), Gaps = 3/208 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKN--VKTPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGMNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVP 320
+S+HPE+F V EIIREKI E+P
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIP 208
>gi|114567081|ref|YP_754235.1| Era, Era/TrmE family GTP-binding protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114338016|gb|ABI68864.1| GTP-binding protein Era, Era/TrmE family [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 293
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N +IG+K++IV+ KPQTTR RI GI + Q+I DTPGI
Sbjct: 2 KSGFVSIVGRPNVGKSTLLNTIIGEKIAIVSEKPQTTRTRIQGIYTCERGQVIFVDTPGI 61
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H+L M+K + D I + D + + + E + D + +P+ L++
Sbjct: 62 HKPK-HLLGEYMVKVSARSLEEVDIIYYMTDVTRPFGGGESFILEQLKDAR--VPVFLLV 118
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ E+ ++ + + EV+ +SA G ++ + D L LP GP YYP+D
Sbjct: 119 NKIDLVSEQEVKDYIQIFNQQRSFSEVVSISAACGTNLQLLIDKTLDALPEGPLYYPEDD 178
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P + E+IREK M R+EVP++ V V +K + K +++ I +E++SQK
Sbjct: 179 LTDQPIYLLIAELIREKALMLTRDEVPHSLAVEVEEFKKQSNGKVYVRAAIYMERDSQKG 238
Query: 354 ILIGKVSPFL 363
ILIGK L
Sbjct: 239 ILIGKKGQML 248
>gi|398817961|ref|ZP_10576560.1| GTP-binding protein Era [Brevibacillus sp. BC25]
gi|398028759|gb|EJL22262.1| GTP-binding protein Era [Brevibacillus sp. BC25]
Length = 305
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 148/251 (58%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N ++G K++I++NKPQTTR++I + + E Q+I DTPGI
Sbjct: 11 KSGFVSIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEEGQIIFLDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L + M+ + D ++ +VDA + D+ + E + + K P+ LV+
Sbjct: 71 -HKPQSKLGNYMVSVAENTLNEVDLVLFVVDATEKRGAGDDYIIERL--KQVKTPVFLVI 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P + ++ Y K D +++P+SA G+ ++ IL ++ GP YYP D
Sbjct: 128 NKIDKVHPEALLPIIDDYRKLYDFKQIVPISALEGNNTGSLQQAILGEMEEGPMYYPADQ 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQK 352
V++HPERF E+IREK+ R EVP++ V + K K +I I VE++SQ+
Sbjct: 188 VTDHPERFVAAELIREKVLHLTREEVPHSIAVVIEEMKRGENGKTLYIYAAIYVERDSQR 247
Query: 353 IILIGKVSPFL 363
ILIG+ L
Sbjct: 248 GILIGQKGQML 258
>gi|375013474|ref|YP_004990462.1| GTP-binding protein Era [Owenweeksia hongkongensis DSM 17368]
gi|359349398|gb|AEV33817.1| GTP-binding protein Era [Owenweeksia hongkongensis DSM 17368]
Length = 291
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 148/246 (60%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSGYV ++G PNVGKSTL N +G+ LSI+T K QTTRHRILG+ + YQ++ DTPG
Sbjct: 2 HKSGYVNIIGNPNVGKSTLMNSFLGEDLSIMTPKAQTTRHRILGLLNDENYQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
II+ + L MM V+S +AD + L + + P + + L++ K+P+LL+
Sbjct: 62 IIQPG-YALQEHMMDFVQSTFEDADIFLFLTEPTEKPIKDERFLQKL---QNTKVPVLLI 117
Query: 233 LNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK DL + K + W E+ + E+ P+SA E + D IL LP GPAY+ K
Sbjct: 118 INKIDLTDQQTLEKVVAHWGEQLPNA-EIYPISALNDFNTEVLLDRILELLPEGPAYFSK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+ +S+ ERFFV E+IRE++ Y E+PYA QV V +K I+ I VE+++Q
Sbjct: 177 EELSDKDERFFVSEMIREQMLKIYSKEIPYAVQVEVEEFKEEEKIIR-IRSIIYVERDTQ 235
Query: 352 KIILIG 357
K I+IG
Sbjct: 236 KSIVIG 241
>gi|421186334|ref|ZP_15643727.1| GTPase [Oenococcus oeni AWRIB418]
gi|399967287|gb|EJO01769.1| GTPase [Oenococcus oeni AWRIB418]
Length = 305
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 152/254 (59%), Gaps = 15/254 (5%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR++I GI + E Q++ DTPG
Sbjct: 5 YKSGFVAIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQVVFLDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K + LD M K A AD + +VDA + D + E + K+ PI L+
Sbjct: 65 -IHKPYNSLDEYMEKASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKIKNT-PIYLL 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFT-------DVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
+NK DLIK KK + ++ + D EV P+SAK G V + D ++ KL G
Sbjct: 123 VNKIDLIK-----KKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIEKLHPG 177
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEI 344
P Y+ K+ +++H ERF V E+IREKI EVP++ V + S K + IQ I
Sbjct: 178 PQYFSKEQITDHSERFLVAELIREKILQLTEQEVPHSIAVVIDSMKKDGVNEKLHIQASI 237
Query: 345 VVEKNSQKIILIGK 358
VVE++SQK I+IGK
Sbjct: 238 VVERSSQKNIIIGK 251
>gi|313891295|ref|ZP_07824913.1| ribosome biogenesis GTPase Era [Streptococcus pseudoporcinus SPIN
20026]
gi|416851945|ref|ZP_11909090.1| GTP-binding protein Era [Streptococcus pseudoporcinus LQ 940-04]
gi|313120362|gb|EFR43483.1| ribosome biogenesis GTPase Era [Streptococcus pseudoporcinus SPIN
20026]
gi|356739434|gb|EHI64666.1| GTP-binding protein Era [Streptococcus pseudoporcinus LQ 940-04]
Length = 299
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEQEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A + + D+++ E + + K +P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEKRGKGDDMIMERLRNAK--IPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ + + + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALEGNNIPTLMSLLTDNLEEGFQYFPADQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + E+P++ V + S K + K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEDSDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|195978544|ref|YP_002123788.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|414564511|ref|YP_006043472.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|226741237|sp|B4U458.1|ERA_STREM RecName: Full=GTPase Era
gi|195975249|gb|ACG62775.1| GTP-binding protein Era-like [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|338847576|gb|AEJ25788.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 298
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + ++P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAARIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+V I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVDSMKRDEVTDKVHIRVTIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|94265607|ref|ZP_01289351.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [delta proteobacterium MLMS-1]
gi|93453886|gb|EAT04244.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [delta proteobacterium MLMS-1]
Length = 299
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 144/249 (57%), Gaps = 15/249 (6%)
Query: 116 GYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIE 175
G+VA++G PN GKSTL N+++GQK++IVT KPQTTR+RILG+ + +YQM+L DTPG+
Sbjct: 12 GFVALIGAPNAGKSTLLNRLLGQKIAIVTPKPQTTRNRILGVVNHRDYQMVLLDTPGLHR 71
Query: 176 KKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL------PI 229
K + L+S M++ R+A D + LVD E H KL P
Sbjct: 72 AK-NRLNSEMVRLARNAAGEVDVVAYLVDVSSETEAEQR-------RHAQKLLREAGKPA 123
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LL+ NK D I ++ + +++ +IP+SA G G + LP GP +
Sbjct: 124 LLLGNKIDRIGKEKLLPLIAAWQEVYPFQAIIPLSALTGEGCQLFLTEASRLLPTGPRLF 183
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+DI ++ ERF GEIIREKI + R+E+PY+ V + + +P IQ I+VEK+
Sbjct: 184 PEDIPTDASERFICGEIIREKIMLLTRDELPYSVAVVIDQFLEKP-GMTTIQATIMVEKD 242
Query: 350 SQKIILIGK 358
SQK I+IGK
Sbjct: 243 SQKGIVIGK 251
>gi|329850745|ref|ZP_08265590.1| GTP-binding protein Era [Asticcacaulis biprosthecum C19]
gi|328841060|gb|EGF90631.1| GTP-binding protein Era [Asticcacaulis biprosthecum C19]
Length = 317
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 146/268 (54%), Gaps = 22/268 (8%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ + + G+VA++G PN GKSTL NQ++G K+SIVT K QTTR + GI E QMIL
Sbjct: 2 TDSSTRCGFVAIIGAPNAGKSTLVNQLVGTKVSIVTQKVQTTRFPVRGIALDEEVQMILV 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC------------------KAPE 210
DTPGI + + LD M+ + +ADC+V+LVDA KA E
Sbjct: 62 DTPGIFKPR-RRLDRAMVASAWGGAEDADCVVLLVDAAAQLAVKGGGEVKATGADHKAVE 120
Query: 211 RIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHG 270
++ I+E G +L LNK DL+K + + V++V+ +SA+ GHG
Sbjct: 121 DVEMIVE---GLKSANRKAILALNKIDLMKSENLLAIADDLYNTGIVEDVLMISAEKGHG 177
Query: 271 VEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY 330
V+D++ + ++P P YP+D ++ P R EI REK+F++ E+PYA V +
Sbjct: 178 VKDLKKLLAKRMPQSPWLYPEDQAADAPVRILAAEITREKLFLRVHEELPYAAAVVTTEF 237
Query: 331 KTRPTAKDFIQVEIVVEKNSQKIILIGK 358
+P I+ I VE++ Q+ I++GK
Sbjct: 238 VDKPDGSVRIEQTIFVERDGQRAIVLGK 265
>gi|339452212|ref|ZP_08655582.1| GTPase [Leuconostoc lactis KCTC 3528]
Length = 303
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 149/246 (60%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA R D+ + + + KD PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVVDASMPRGRGDDFIISRLKEVKDT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ E+ ++ Y E EV P+SA G V ++ I+ L GP Y+ D
Sbjct: 125 NKVDLVTSDELLDVIQSYQEDAPTWAEVFPISATEGDNVPELLGNIVETLEEGPQYFDSD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R E+P++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEIPHSVAVVIDKIARESEDKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|428773439|ref|YP_007165227.1| GTP-binding protein Era [Cyanobacterium stanieri PCC 7202]
gi|428687718|gb|AFZ47578.1| GTP-binding protein Era [Cyanobacterium stanieri PCC 7202]
Length = 313
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 144/246 (58%), Gaps = 4/246 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG++A++G+PNVGKSTL NQ+IGQK++I + QTTR+R+ GI + E Q+I DTP
Sbjct: 18 NFKSGFIAIIGRPNVGKSTLMNQLIGQKVAITSPVAQTTRNRLQGILTTDEAQIIFVDTP 77
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K H L ++++N SA N D ++ +VD + D + + + P++L
Sbjct: 78 GI-HKPHHELGRVLVQNAVSAINNVDVVLFVVDCAQKAGGGDRYIADLL--QNSNTPVIL 134
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK DL K + E D + + SA G G+E+++ ++T L GP YYP
Sbjct: 135 GLNKADLQKGNGEEIDASYREICRDNWQQVKFSAVNGFGLEELQQKLITNLDFGPYYYPP 194
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D+V++ PERF +GE+IRE+I + R E+P++ V + P I I VE+ SQ
Sbjct: 195 DLVTDQPERFIMGELIREQILLLTREEIPHSVAVTIEKMVETPKLTK-IYAAISVERKSQ 253
Query: 352 KIILIG 357
K I+IG
Sbjct: 254 KGIIIG 259
>gi|429205300|ref|ZP_19196577.1| putative GTP-binding protein [Lactobacillus saerimneri 30a]
gi|428146372|gb|EKW98611.1| putative GTP-binding protein [Lactobacillus saerimneri 30a]
Length = 300
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 142/240 (59%), Gaps = 3/240 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG++A++G+PNVGKST N+ +G K++I+++KPQTTR++I GI + + Q++ DTP
Sbjct: 4 NFHSGFIAIVGRPNVGKSTFLNRAVGDKIAIMSDKPQTTRNKIQGIYTTDDAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+ + S D ++ +V+A + R D+ + + D K PI L
Sbjct: 64 GI-HKPHSRLGDFMVDSALSTLNEVDAVMFMVNATQKRGRGDDFIINRLKDVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK D + P + + ++ Y + +V P+SA G+ V ++ ++ LP GP YYP
Sbjct: 121 IINKIDQVHPDHLLEIMDDYRDSLEYKDVFPISALNGNNVPELIQQLIADLPEGPQYYPS 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++HPERF GE+IREK+ R EVP++ V V + K +Q ++VE+ SQ
Sbjct: 181 DQITDHPERFIAGELIREKVLQFTREEVPHSVAVVVERIRREDDEKVLVQATVIVERKSQ 240
>gi|225870931|ref|YP_002746878.1| GTP-binding protein Era [Streptococcus equi subsp. equi 4047]
gi|254783664|sp|C0MBF0.1|ERA_STRE4 RecName: Full=GTPase Era
gi|225700335|emb|CAW94640.1| GTP-binding protein Era homolog [Streptococcus equi subsp. equi
4047]
Length = 298
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++++++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAVMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + ++P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAARIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+V I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVDSMKRDEVTDKVHIRVTIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|163816524|ref|ZP_02207888.1| hypothetical protein COPEUT_02714 [Coprococcus eutactus ATCC 27759]
gi|158448224|gb|EDP25219.1| ribosome biogenesis GTPase Era [Coprococcus eutactus ATCC 27759]
Length = 299
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 151/255 (59%), Gaps = 10/255 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
+KSG+V+++G+PNVGKSTL N++IGQK++I +NK QTTR+RI + + + Q+I DTPG
Sbjct: 5 YKSGFVSIIGRPNVGKSTLMNRLIGQKIAITSNKAQTTRNRIQTVYTSDKGQIIFLDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APERIDEILEEGVGDHKDKLPI 229
I K + L M+K S D ++ +V+A A ER I+E+ K PI
Sbjct: 65 INRAK-NKLGEYMLKVAESTLDEVDVVLWIVEATTFIGAGERY--IIEQL---QHVKTPI 118
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
++V+NK D ++ G++ + + Y+ D E++PVSA G +++ D I+ LP GP YY
Sbjct: 119 IVVVNKIDNVEEGKVFEAINTYKDACDFAEIVPVSALKGKNTDELIDTIMKYLPYGPQYY 178
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEK 348
+D V++ PER V E+IRE+ Q EVP+ V + S K RP I I+ E+
Sbjct: 179 DEDTVTDQPERQIVAELIREQALRQLDKEVPHGIAVVIDSMKERPNGGIIDIDATIICER 238
Query: 349 NSQKIILIGKVSPFL 363
+S K I+IGK L
Sbjct: 239 DSHKGIIIGKQGAML 253
>gi|352096223|ref|ZP_08957103.1| GTP-binding protein Era-like-protein [Synechococcus sp. WH 8016]
gi|351676917|gb|EHA60068.1| GTP-binding protein Era-like-protein [Synechococcus sp. WH 8016]
Length = 317
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 157/267 (58%), Gaps = 12/267 (4%)
Query: 105 FDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQ 164
F ++ +SG+VA++G+PNVGKSTL NQ+IG K++I + QTTR+R+ I + E Q
Sbjct: 9 FTSSAPEGFRSGFVALIGRPNVGKSTLVNQLIGDKIAITSPVAQTTRNRLRAILTTDEAQ 68
Query: 165 MILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK 224
+IL DTPG I K H+L ++++ RSA D +++L++ +AP R D + + + +
Sbjct: 69 LILVDTPG-IHKPHHLLGERLVRSARSAIGEVDQVLLLLEGNEAPGRGDAFIVQLL--RQ 125
Query: 225 DKLPILLVLNKKDLIKPGEI--AKKLEWYEKFTDVD-EVIPVSAKYGHGVEDIRDWILTK 281
LP+ ++LNK DL+ P E A + E D D V SA G G ++ I +
Sbjct: 126 QSLPVQVLLNKWDLV-PLEQKDAADAAYRELLADTDWPVHRCSALSGDGCPELVKAISSL 184
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV-----VSYKTRPTA 336
+P GP YP D+VS+ PER +GE+IRE++ + R EVP++ V++ + K + +
Sbjct: 185 MPEGPQLYPSDMVSDQPERLLMGELIREQVLLNTREEVPHSVAVSIDRIEEMPSKGKGSG 244
Query: 337 KDFIQVEIVVEKNSQKIILIGKVSPFL 363
+ + ++VE+ SQK ILIGK L
Sbjct: 245 RTAVLATVLVERKSQKGILIGKGGAML 271
>gi|320529427|ref|ZP_08030515.1| GTP-binding protein Era [Selenomonas artemidis F0399]
gi|320138393|gb|EFW30287.1| GTP-binding protein Era [Selenomonas artemidis F0399]
Length = 298
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 149/260 (57%), Gaps = 18/260 (6%)
Query: 112 NH-KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
NH KSG+ AV+G+PN GKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DT
Sbjct: 2 NHYKSGFAAVIGRPNAGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDT 61
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH------- 223
PG+ + K H L S M K A + V+V A E++ G G+
Sbjct: 62 PGVHKPK-HKLGSHMAKATEGA---LHGVDVVVFVVDATEKM------GAGEQYILKQLE 111
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K ++P+LL +NK DL++ E + Y K D ++P+SA+ + + D I LP
Sbjct: 112 KVRVPVLLAVNKIDLLRREETLPIIASYAKTYDFAGIVPISARAEENLAGLLDEIKKHLP 171
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YYP+D+V++ PER + E++REK R+E+P+A V++ TR +++
Sbjct: 172 EGPRYYPEDMVTDQPERLIIAELVREKALELTRDEIPHAVAVDIEEITTRAKGDVYVRAV 231
Query: 344 IVVEKNSQKIILIGKVSPFL 363
I VE+ SQK I+IG L
Sbjct: 232 IYVERESQKGIVIGARGALL 251
>gi|21263583|sp|Q8YYD8.2|ERA_NOSS1 RecName: Full=GTPase Era
Length = 324
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 154/254 (60%), Gaps = 15/254 (5%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG++ ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DT
Sbjct: 28 PEFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDT 87
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDK 226
PG I K H L +++KN + A + D ++ +VD AC A +R I ++L K
Sbjct: 88 PG-IHKPHHQLGEVLVKNAKLAIESVDVVLFVVDGAVACGAGDRFIADLLIH------SK 140
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPL 284
P++L +NK D +P + K E Y++ + + SAK G + +++ ++ L
Sbjct: 141 TPVILGINKVDQ-QPPDSQKIDESYQQLASAYQWPTVKFSAKTGAELPQLQELLVEHLEH 199
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + + PT + I
Sbjct: 200 GPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEETPTITRVL-ATI 258
Query: 345 VVEKNSQKIILIGK 358
VE++SQK ILIGK
Sbjct: 259 HVERDSQKGILIGK 272
>gi|169632754|ref|YP_001706490.1| GTP-binding protein Era [Acinetobacter baumannii SDF]
gi|260556583|ref|ZP_05828801.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|169151546|emb|CAP00313.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter baumannii]
gi|260409842|gb|EEX03142.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452947999|gb|EME53480.1| GTPase Era [Acinetobacter baumannii MSP4-16]
Length = 342
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 148/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +L++ +P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAHKWTQNDDLVLDKL---KNADMPVIL 152
Query: 232 VLNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D EI ++ K + E++PVSA G +E + + I LP P Y
Sbjct: 153 VINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQPPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEATVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRPGQKAIVIGE 291
>gi|17228407|ref|NP_484955.1| GTP-binding protein Era [Nostoc sp. PCC 7120]
gi|17130258|dbj|BAB72869.1| GTP-binding protein [Nostoc sp. PCC 7120]
Length = 337
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 155/259 (59%), Gaps = 15/259 (5%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG++ ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DT
Sbjct: 41 PEFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDT 100
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDK 226
PG I K H L +++KN + A + D ++ +VD AC A +R I ++L K
Sbjct: 101 PG-IHKPHHQLGEVLVKNAKLAIESVDVVLFVVDGAVACGAGDRFIADLLIH------SK 153
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPL 284
P++L +NK D +P + K E Y++ + + SAK G + +++ ++ L
Sbjct: 154 TPVILGINKVDQ-QPPDSQKIDESYQQLASAYQWPTVKFSAKTGAELPQLQELLVEHLEH 212
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + + PT + I
Sbjct: 213 GPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEETPTITRVL-ATI 271
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE++SQK ILIGK L
Sbjct: 272 HVERDSQKGILIGKGGSML 290
>gi|302874334|ref|YP_003842967.1| GTP-binding protein Era [Clostridium cellulovorans 743B]
gi|307689399|ref|ZP_07631845.1| GTP-binding protein Era [Clostridium cellulovorans 743B]
gi|302577191|gb|ADL51203.1| GTP-binding protein Era [Clostridium cellulovorans 743B]
Length = 296
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 147/246 (59%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSGYVA++G+PNVGKSTL N ++G+KLSIV+ +PQTTR+ I I + ++Q+I DTPG+
Sbjct: 3 KSGYVAIIGRPNVGKSTLMNNLMGEKLSIVSPRPQTTRNNIQTILTKKDFQIIFVDTPGM 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKLPILLV 232
+ K H L MMK+V + + D +V + A D+ ILE+ + K LV
Sbjct: 63 HKPK-HKLGEFMMKSVSDSLKDVDLVVFMTTADGELGPGDKHILEDLKKVNSKKF---LV 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D K +A+ L+ + + DE+IP+SA G + + + ++ LP GP YYP+D
Sbjct: 119 VNKIDETKAETVAETLQVVGELVEFDEIIPISALNGKNTDKLLELMVDYLPEGPMYYPED 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++++ ERF V EIIREK EVP+ V +VS K I V ++ EK+S K
Sbjct: 179 MITDAQERFIVSEIIREKALRLLSQEVPHGIAVEIVSMKQDKKNTYHIDVNMICEKDSHK 238
Query: 353 IILIGK 358
I++GK
Sbjct: 239 GIIVGK 244
>gi|227892551|ref|ZP_04010356.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047]
gi|227865672|gb|EEJ73093.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047]
Length = 301
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 143/243 (58%), Gaps = 10/243 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTP
Sbjct: 5 DFKSGFVALIGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSNKMQVVFVDTP 64
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLP 228
GI K LD M K S+ + D ++ +V+ K + I ++L+E K+P
Sbjct: 65 GIF-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEEIGKGDQYIADLLKEV------KVP 117
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ I LP GP Y
Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLGTINKYLPEGPQY 177
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y D +++ PE F V E+IRE+I + EVP+A V V K I+ I VEK
Sbjct: 178 YGADQITDRPEYFVVAELIREQILVLTSQEVPHATAVAVDHMNKHERGKLVIEATIYVEK 237
Query: 349 NSQ 351
+ Q
Sbjct: 238 DGQ 240
>gi|294793788|ref|ZP_06758925.1| GTP-binding protein Era [Veillonella sp. 3_1_44]
gi|294455358|gb|EFG23730.1| GTP-binding protein Era [Veillonella sp. 3_1_44]
Length = 307
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+
Sbjct: 16 KSGFVAVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDESKQIVFMDTPGV 75
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + ++ +V + D + E + + K+P+ LV+
Sbjct: 76 HKPK-HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVV 132
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +K E+ + + +Y+ VIP+SAK + +I + LP GP Y+P+D+
Sbjct: 133 NKIDTLKKEELLEAIVFYQDAYPFAGVIPISAKDKENLSEILKVLEETLPEGPQYFPEDM 192
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK
Sbjct: 193 ITDQPERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKG 252
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 253 IIIGKKGALL 262
>gi|312115947|ref|YP_004013543.1| GTP-binding protein Era [Rhodomicrobium vannielii ATCC 17100]
gi|311221076|gb|ADP72444.1| GTP-binding protein Era [Rhodomicrobium vannielii ATCC 17100]
Length = 364
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+ AV+G PN GKSTL N ++G K+SIVT+K QTTR R+ GI E Q++L DTPGI
Sbjct: 70 RCGFAAVIGAPNAGKSTLVNALVGAKVSIVTHKAQTTRTRVRGIALDGEAQIVLVDTPGI 129
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLV 232
K LD M++ + AD V++VDA + + +D I+ E K+P++L
Sbjct: 130 FAPK-RRLDRAMVETAWTEAREADVAVLVVDAARGFDDTVDPIVNEAA---NLKIPLILA 185
Query: 233 LNKKDLI-KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK D I K +A E E+ ++ + +SA G GVED+R ++ T++P GP +P+
Sbjct: 186 LNKVDKIHKEKLLALAGEASERLK-LESLFMISALSGDGVEDLRGFLATRMPYGPWLFPE 244
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D +++ P R + EI REK+F++ E+PY+ V S+K+ I+ I VE+ SQ
Sbjct: 245 DQIADAPLRQWAAEITREKMFIRLHEEIPYSSTVETTSWKSVRKGAVRIEQTIFVERESQ 304
Query: 352 KIILIG 357
+ I++G
Sbjct: 305 RKIVLG 310
>gi|399046967|ref|ZP_10739155.1| GTP-binding protein Era [Brevibacillus sp. CF112]
gi|433545480|ref|ZP_20501833.1| GTP-binding protein [Brevibacillus agri BAB-2500]
gi|398055117|gb|EJL47209.1| GTP-binding protein Era [Brevibacillus sp. CF112]
gi|432183135|gb|ELK40683.1| GTP-binding protein [Brevibacillus agri BAB-2500]
Length = 305
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 149/251 (59%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N ++G K++I++NKPQTTR++I + + + Q+I DTPGI
Sbjct: 11 KSGFVSIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEDGQIIFLDTPGI 70
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K L + M+ + D ++ +VDA + D+ + E + + K P+ LV+
Sbjct: 71 -HKPQSKLGNYMVSVAENTLNEVDLVLFVVDATEKRGAGDDYIIERL--KQVKTPVFLVI 127
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P + ++ Y K D +++P+SA G+ + + I+ ++ GP +YP D
Sbjct: 128 NKIDKVHPEALLPIIDDYRKLYDFKQIVPISALQGNNTSSLTEAIMGEMEEGPMFYPADQ 187
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEKNSQK 352
V++HPERF V E+IREK+ R EVP++ V V K K +I I VE++SQ+
Sbjct: 188 VTDHPERFVVAELIREKVLHLTREEVPHSIAVVVEEMKRGENGKTLYIYAAIYVERDSQR 247
Query: 353 IILIGKVSPFL 363
ILIG+ L
Sbjct: 248 GILIGQKGQML 258
>gi|342215118|ref|ZP_08707783.1| GTP-binding protein Era [Veillonella sp. oral taxon 780 str. F0422]
gi|341589767|gb|EGS33030.1| GTP-binding protein Era [Veillonella sp. oral taxon 780 str. F0422]
Length = 299
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 151/255 (59%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S KSG+VAV+G+PNVGKSTL N +I K+ IV++K QTTR+RI+ + + + Q++
Sbjct: 3 SEKGFKSGFVAVVGRPNVGKSTLINALIDDKIVIVSDKAQTTRNRIVCVYTDEKKQIVFM 62
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+ + + ++ +V A + D + E + K +P
Sbjct: 63 DTPGIHKPK-HKLGEFMVDQAVDSLREVEAVLFVVAANEKRGPGDNFVIEQL--RKVNVP 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D + ++ + + YE + V+P+SAK +E++ + + LP GP Y
Sbjct: 120 VFLIVNKIDTMDKQDLLEAIVSYENSYPFEAVVPISAKEKDNIEEVVNLLEKHLPEGPKY 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
+P D++++ PER + +I+REKI +Q +E+P+A V+V KTR +++ I VE+
Sbjct: 180 FPDDMITDQPERLIISDIVREKILLQTHDEIPHAIAVDVDEMKTREDGTTYVRATIYVER 239
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 240 DSQKGIIIGKQGAML 254
>gi|325956928|ref|YP_004292340.1| GTPase Era [Lactobacillus acidophilus 30SC]
gi|325333493|gb|ADZ07401.1| GTPase Era [Lactobacillus acidophilus 30SC]
Length = 301
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALIGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDDMQIVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I ++L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEKIGKGDQYIADLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLATLNKYLPEGPQYYS 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VE++
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLVIEATIYVERDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|224368191|ref|YP_002602354.1| hypothetical protein HRM2_10780 [Desulfobacterium autotrophicum
HRM2]
gi|223690907|gb|ACN14190.1| Era [Desulfobacterium autotrophicum HRM2]
Length = 300
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 144/253 (56%), Gaps = 4/253 (1%)
Query: 106 DYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 165
D + K+G++A++G PN GKSTL N ++GQK+SI + KPQTTR RILG+ P Q+
Sbjct: 4 DTPQETDFKAGFIAIVGAPNAGKSTLLNTVLGQKISITSKKPQTTRDRILGVVERPGAQI 63
Query: 166 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKD 225
I DTPG I + +L+ ++ SA + D +++++D + ++ E + K
Sbjct: 64 IFVDTPG-IHRAHSLLNKKIVDQALSAVDDVDAVLLMIDVTSKDTESEALIIEQL--QKR 120
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
++L LNK DL+K EI + Y + VIPVSAK G E + + LP G
Sbjct: 121 NKAVVLALNKIDLVKSNEILPLIARYASLHEFKAVIPVSAKTGDQTEKLLAEVQRCLPPG 180
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
+PKD +++ +RF GE+IREK+F E+PY+ V V ++K P + I I
Sbjct: 181 QRLFPKDTLTDVSQRFIAGEMIREKVFRLTGMEIPYSIAVTVDAFKETPRLTE-IHATIH 239
Query: 346 VEKNSQKIILIGK 358
V+++SQK I+IGK
Sbjct: 240 VDRDSQKGIIIGK 252
>gi|385817770|ref|YP_005854160.1| GTPase Era [Lactobacillus amylovorus GRL1118]
gi|327183708|gb|AEA32155.1| GTPase Era [Lactobacillus amylovorus GRL1118]
Length = 301
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDDMQIVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I ++L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEKIGKGDQYIADLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLESFKEILPISATQGIGIEDLLATLNKYLPEGPQYYS 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VE++
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLVIEATIYVERDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|194397601|ref|YP_002037604.1| GTP-binding protein Era [Streptococcus pneumoniae G54]
gi|226741240|sp|B5E488.1|ERA_STRP4 RecName: Full=GTPase Era
gi|194357268|gb|ACF55716.1| GTP-binding protein Era homolog [Streptococcus pneumoniae G54]
Length = 299
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 155/251 (61%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQ ++I+ +K TTR++I+GI + + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQXIAIMXDKAXTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S D ++ +V A +A + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERL--KAAKVPVILVV 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D E++P+SA G+ V + D + L G Y+P D
Sbjct: 121 NKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ R E+P++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKGGAML 251
>gi|77411686|ref|ZP_00788025.1| GTP-binding protein Era [Streptococcus agalactiae CJB111]
gi|77162258|gb|EAO73230.1| GTP-binding protein Era [Streptococcus agalactiae CJB111]
Length = 299
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVSTLIKLLTDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|428775819|ref|YP_007167606.1| GTP-binding protein Era [Halothece sp. PCC 7418]
gi|428690098|gb|AFZ43392.1| GTP-binding protein Era [Halothece sp. PCC 7418]
Length = 310
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 150/255 (58%), Gaps = 6/255 (2%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
PN KSG+V ++G+PNVGKSTL N++IG+K++I + QTTR+R+ GI + QMI DT
Sbjct: 13 PNFKSGFVGLIGRPNVGKSTLMNELIGEKVAITSPVAQTTRNRLRGILTTETAQMIFVDT 72
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
PG I K H L +++KN +S D I+++VDA D + E + K K+P+L
Sbjct: 73 PG-IHKPHHELGKVIVKNAQSTIEAVDLILLVVDASSPAGGGDRYIVELL--KKSKVPVL 129
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVD--EVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LNK DL + K L Y + E+I SA G G++ +++ + +L +GP Y
Sbjct: 130 VGLNKSDLGNEEKRGKNLATYRELLKDQPWELIQFSALTGVGLDSLQEKLRERLEIGPYY 189
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D+VS+ PER + E+IRE+I + R E+P++ + ++ T I+ I VE+
Sbjct: 190 YPPDLVSDQPERLVMAELIREQILRETREEIPHSVAI-IIDQITEEKNLTTIRATINVER 248
Query: 349 NSQKIILIGKVSPFL 363
SQK ILIGK L
Sbjct: 249 ASQKGILIGKKGTML 263
>gi|284047992|ref|YP_003398331.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731]
gi|283952213|gb|ADB47016.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731]
Length = 308
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 148/247 (59%), Gaps = 3/247 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
H SG+VAV+G+PN GKSTL N ++G+K++I++++PQTTR+RIL I S E QM+ DTP
Sbjct: 8 QHHSGFVAVVGRPNAGKSTLVNHLVGEKVAIISDRPQTTRNRILSILSTEEAQMVFLDTP 67
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G + K L M++ +A D ++ +VDA + + ++++ E + + P++L
Sbjct: 68 G-LHKPQDKLGEHMVQAALNAIKEVDVVLFVVDASEKRGKGEQVILERLKEECHA-PVIL 125
Query: 232 VLNKKD-LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
VLNK D L + ++ + K V+ +SA + I+ LP GP++YP
Sbjct: 126 VLNKIDRLPDKAVLLPIIDKFRKEYPFRSVLTLSALEDEDFSPLLQEIVRCLPEGPSFYP 185
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
+D+ ++ PER EI+REKI R+EVP+A V V KTRP +++ +I VE++S
Sbjct: 186 EDMYTDQPERVMAAEIVREKILQLTRDEVPHAVAVQVQEMKTRPNNLVYVRADIYVERDS 245
Query: 351 QKIILIG 357
QK ILIG
Sbjct: 246 QKAILIG 252
>gi|297171214|gb|ADI22222.1| GTPase [uncultured Gemmatimonadales bacterium HF0200_34B24]
gi|297171330|gb|ADI22335.1| GTPase [uncultured actinobacterium HF0500_01C15]
Length = 309
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 144/256 (56%), Gaps = 12/256 (4%)
Query: 106 DYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQM 165
D S ++GYVA++G+PN GKSTL N+ +G+ LSIVT+K QTT R+ GI + Q+
Sbjct: 4 DGPSQSTTRAGYVALVGRPNAGKSTLLNRFVGEHLSIVTSKAQTTWQRVTGIRTKGTDQL 63
Query: 166 ILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER--IDEILEEGVGDH 223
I DTPG++E + +L M+ A AD +++VD + P + D IL H
Sbjct: 64 IFLDTPGLLETR-DLLQHAMLGAALEALAEADVALLVVDTTRRPTQTDTDRILAAFSEIH 122
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
+ P+ +VLNK D I W E+ +V VSAK G GV+ + + I LP
Sbjct: 123 R---PLHIVLNKLDQANLSSIEAWKSWSEEGLS-GQVHSVSAKTGKGVDSLLNVICEDLP 178
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYA--CQVNVVSYKTRPTAKDFIQ 341
GP YP+D ++ P RFFV E +RE IF Q+ E+PYA CQV K PT +I
Sbjct: 179 EGPFLYPEDDIASDPVRFFVAEFVREAIFEQFHQEIPYAVFCQVAEFREKQDPT---YIH 235
Query: 342 VEIVVEKNSQKIILIG 357
V+I VE+ SQK I++G
Sbjct: 236 VDIFVERKSQKRIMVG 251
>gi|406674537|ref|ZP_11081736.1| GTP-binding protein Era [Bergeyella zoohelcum CCUG 30536]
gi|423317499|ref|ZP_17295404.1| GTP-binding protein Era [Bergeyella zoohelcum ATCC 43767]
gi|405580091|gb|EKB54163.1| GTP-binding protein Era [Bergeyella zoohelcum ATCC 43767]
gi|405583092|gb|EKB57061.1| GTP-binding protein Era [Bergeyella zoohelcum CCUG 30536]
Length = 291
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 146/245 (59%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPN GKSTL N+++G+KL+IVT K QTTRHRI GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNRLMGEKLAIVTQKAQTTRHRIFGIYNEDDLQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++E K + L MM V+ + +AD + +VD+ E + ++++ +K +P+L++
Sbjct: 62 VLEPK-YELQEKMMDFVKDSLQDADVFLFIVDSTDKSEPSEFLIDKL---NKIPVPVLIL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D + ++ + K E++P+SA G E I + + LP P YY KD
Sbjct: 118 LNKIDRSNQEHLNTMIDEWHKRIPKAEILPISALEGFNTEYILPKLKSLLPENPPYYDKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ ERFFV E IREKI + Y E+PY+ +V +K FI I VE+ +QK
Sbjct: 178 QFTDKSERFFVNEAIREKILLNYEKEIPYSVEVVTEQFKENEGII-FIDTVIYVERETQK 236
Query: 353 IILIG 357
ILIG
Sbjct: 237 GILIG 241
>gi|386316451|ref|YP_006012615.1| GTP-binding protein Era [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323126738|gb|ADX24035.1| GTP-binding protein Era [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 259
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRTTIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|333398588|ref|ZP_08480401.1| GTP-binding protein era [Leuconostoc gelidum KCTC 3527]
gi|406600067|ref|YP_006745413.1| GTP-binding protein era [Leuconostoc gelidum JB7]
gi|406371602|gb|AFS40527.1| GTP-binding protein era [Leuconostoc gelidum JB7]
Length = 303
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 149/246 (60%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+K++I+++K QTTR++I GI + Q++ DTPGI
Sbjct: 7 KSGFVTIIGRPNVGKSTLLNCIVGEKIAIMSDKAQTTRNKIQGIYTTDSAQVVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA R D+ + + + K+ I L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHGADAIWFVVDASMPRGRGDDFIINRLKEIKNT-AIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y E + EV P+SA+ G V ++ D ++ L GP Y+ D
Sbjct: 125 NKVDLLAPKDLLNIIASYQEDAPEWAEVFPISAREGDNVSELLDNVVAGLDEGPQYFDAD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ IVVE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKISRESEEKIHIQASIVVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>gi|354594332|ref|ZP_09012371.1| GTP-binding protein Era [Commensalibacter intestini A911]
gi|353672008|gb|EHD13708.1| GTP-binding protein Era [Commensalibacter intestini A911]
Length = 293
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 139/244 (56%), Gaps = 7/244 (2%)
Query: 116 GYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIE 175
G+VA++G PN GKSTL N+M G KLSIV+ K QTTR RILGI + Q++L DTPGI +
Sbjct: 4 GFVALIGAPNAGKSTLLNKMAGAKLSIVSPKAQTTRMRILGIVMRQQTQILLMDTPGIFK 63
Query: 176 KKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKLPILLVL 233
K LD M+ + ++AD ++L+DA DE + +H ++ I LV
Sbjct: 64 PK-RKLDEAMVAAAWTGAVDADITLLLIDANLG--LTDE--NRDIINHLKENSRRIWLVF 118
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P ++ E +++ VSAK G GV+D+ D + +LP GP YP+D
Sbjct: 119 NKIDKINPQKLLPLTEEITSMLSIEKSFMVSAKTGSGVDDLLDSLAEELPKGPWLYPEDD 178
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
++ P+R E++RE+IFMQ EVPY+ S+K RP I V I V + + K
Sbjct: 179 LTNLPDRLLAAELVREQIFMQTHEEVPYSVTAETESFKERPDGSVRIDVTIYVLRANHKA 238
Query: 354 ILIG 357
I+IG
Sbjct: 239 IIIG 242
>gi|281411523|ref|YP_003345602.1| GTP-binding protein Era [Thermotoga naphthophila RKU-10]
gi|281372626|gb|ADA66188.1| GTP-binding protein Era [Thermotoga naphthophila RKU-10]
Length = 300
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 14/251 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+ GKPNVGKST N ++G+K+ IV++KPQTTR+RI I + + Q+I DTPGI
Sbjct: 4 KSGFVALAGKPNVGKSTFINAVMGRKVVIVSDKPQTTRNRINCIYTDKDSQIIFVDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K +H L M+K A D ++ ++DA + DE + E V D K ++ +
Sbjct: 64 -HKPLHRLGEYMVKAAVQALKGVDLVLFMLDAADGFTKTDEHVAEIVNDSGTK--TIIAV 120
Query: 234 NKKDLIKP------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
NK D+ GE+AK + +V V +SA G GV ++ + I +LP GP
Sbjct: 121 NKIDVAGEEKAKAVGELAKSM-----VENVVSVHYISALKGEGVFEVLEKIKEELPEGPQ 175
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP+D+V++ P F EIIREKIF R EVP++ V + K RP +I+ I VE
Sbjct: 176 YYPEDMVTDRPLSFIAAEIIREKIFHLTRQEVPHSTAVVIEEIKDRPNGVLYIRANIYVE 235
Query: 348 KNSQKIILIGK 358
++SQK ILIGK
Sbjct: 236 RDSQKGILIGK 246
>gi|365839497|ref|ZP_09380735.1| ribosome biogenesis GTPase Era [Anaeroglobus geminatus F0357]
gi|364564587|gb|EHM42345.1| ribosome biogenesis GTPase Era [Anaeroglobus geminatus F0357]
Length = 298
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 148/252 (58%), Gaps = 17/252 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+V+G+PNVGKSTL N+++GQK++IV++K QTTR++IL I + + Q++ DTPGI
Sbjct: 6 KSGFVSVVGRPNVGKSTLINRILGQKVTIVSDKAQTTRNKILCIHTDADSQIVFLDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD----HKDK--- 226
+ K H L M + + + D ++ LV A DE + G GD HK K
Sbjct: 66 HKPK-HKLGRFMDEAAYGSLKDIDAVLFLVAA-------DE--KRGPGDMFILHKIKDIH 115
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+ LV+NK D + ++ K + Y D +IPVSA G V + + LP GP
Sbjct: 116 APVFLVINKIDKLDKEKLLKIMADYSSLCDFAAIIPVSALKGENVSAVMGELKKILPPGP 175
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
Y+P D++++ PER V EI+REK+ R EVP+A V R K +I+V + V
Sbjct: 176 KYFPDDMITDRPERLLVAEIVREKLLQLTREEVPHALAVYTEEMAKRENNKVYIRVTVYV 235
Query: 347 EKNSQKIILIGK 358
E++SQK I+IGK
Sbjct: 236 ERDSQKRIVIGK 247
>gi|302878421|ref|YP_003846985.1| GTP-binding protein Era [Gallionella capsiferriformans ES-2]
gi|302581210|gb|ADL55221.1| GTP-binding protein Era [Gallionella capsiferriformans ES-2]
Length = 303
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 153/265 (57%), Gaps = 22/265 (8%)
Query: 103 EEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPE 162
EE A +++SGY+A++G+PNVGKSTL N +IGQK+SI + K QTTRHRI GI +
Sbjct: 3 EETTNAPDDSYRSGYIAIVGRPNVGKSTLLNHLIGQKISITSRKAQTTRHRINGIYTDDH 62
Query: 163 YQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD 222
Q + DTPG K ++ L+ M + V S+ + ++ +++A + ER E+L+
Sbjct: 63 SQFVFVDTPGFQLKHLNALNRGMNRVVTSSLRDVQVVMYVLEALRYDERDQEVLKL---- 118
Query: 223 HKDKLPILLVLNKKDLIKPGEIAKKLEWYE---------KFTDVDEVIPVSAKYGHGVED 273
D P+LLV+NK D E+A K + ++ KF D ++PVSAK+G +E+
Sbjct: 119 LPDNRPVLLVINKID-----EVADKGQLFDFAERIAKDFKFAD---IVPVSAKFGKKIEE 170
Query: 274 IRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTR 333
+RD + + LP G Y D V++ ERF EI+REK+F E+PY+ V + ++
Sbjct: 171 LRDTLRSFLPEGGLIYDADDVTDRSERFLASEILREKVFRFTGEELPYSVSVVIEKFEMD 230
Query: 334 PTAKDFIQVEIVVEKNSQKIILIGK 358
+ I I+V+K + K +L+GK
Sbjct: 231 KKLRR-ISAAILVDKEAHKAMLLGK 254
>gi|225868116|ref|YP_002744064.1| GTP-binding protein Era homolog [Streptococcus equi subsp.
zooepidemicus]
gi|259646273|sp|C0MCD8.1|ERA_STRS7 RecName: Full=GTPase Era
gi|225701392|emb|CAW98467.1| GTP-binding protein Era homolog [Streptococcus equi subsp.
zooepidemicus]
Length = 298
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K Q+TR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQSTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + ++P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAARIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D E++P+SA G+ VE + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+V I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVDSMKRDEVTDKVHIRVTIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|150009039|ref|YP_001303782.1| GTP-binding protein Era [Parabacteroides distasonis ATCC 8503]
gi|262383938|ref|ZP_06077074.1| GTP-binding protein Era [Bacteroides sp. 2_1_33B]
gi|298375726|ref|ZP_06985682.1| GTP-binding protein Era [Bacteroides sp. 3_1_19]
gi|301312103|ref|ZP_07218025.1| GTP-binding protein Era [Bacteroides sp. 20_3]
gi|149937463|gb|ABR44160.1| GTP-binding protein Era [Parabacteroides distasonis ATCC 8503]
gi|262294836|gb|EEY82768.1| GTP-binding protein Era [Bacteroides sp. 2_1_33B]
gi|298266763|gb|EFI08420.1| GTP-binding protein Era [Bacteroides sp. 3_1_19]
gi|300830205|gb|EFK60853.1| GTP-binding protein Era [Bacteroides sp. 20_3]
Length = 296
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 5 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + + G +AD ++ + D + ++ +E L + P+LL+
Sbjct: 65 VLRPNYKLQESMLNFSQSALG-DADVLLYVTDVVETIDKNNEFLARV---QSIECPVLLL 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 121 INKIDQTNQPELEKLVAQWKELLPKAEIIPISALSNFNIDYVKRRVEELMPDSPPYFEKD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE+++QK
Sbjct: 181 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEDDELIH-IKALIIVERDTQK 239
Query: 353 IILIG 357
I+IG
Sbjct: 240 GIIIG 244
>gi|291546834|emb|CBL19942.1| GTP-binding protein Era [Ruminococcus sp. SR1/5]
Length = 302
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 149/258 (57%), Gaps = 13/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N +SG+VA++G+PNVGKSTL N +IGQK++I +NKPQTTR++I + + E Q++ DTP
Sbjct: 4 NFRSGFVAIIGRPNVGKSTLMNHLIGQKIAITSNKPQTTRNKIQTVYTCDEGQIVFLDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APER-IDEILEEGVGDHKDKL 227
GI + K + L M++ D I+ LV+ A ER I E L++ VG +
Sbjct: 64 GIHKAK-NKLGEYMVQVAERTLKEVDAIMWLVEPSTFVGAGERHIAEQLQK-VG-----V 116
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P++L++NK D +K E+ ++ Y K D E+IP SA G +DI I LP GP
Sbjct: 117 PVILIINKIDTVKKEELLPAIDTYRKICDFAEIIPCSALRGKNTQDIIPSIFKYLPYGPM 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IV 345
+Y +D V++ P+R EIIREK E+P+ V + K RP + I ++ I+
Sbjct: 177 FYDEDTVTDQPQRQIAAEIIREKALHALDEEIPHGIAVAIDRMKKRPGRSNIIDIDATII 236
Query: 346 VEKNSQKIILIGKVSPFL 363
E+NS K I+IGK L
Sbjct: 237 CERNSHKGIIIGKQGAML 254
>gi|255014875|ref|ZP_05287001.1| GTP-binding protein Era [Bacteroides sp. 2_1_7]
gi|256840957|ref|ZP_05546464.1| GTP-binding protein Era [Parabacteroides sp. D13]
gi|410102716|ref|ZP_11297641.1| GTP-binding protein Era [Parabacteroides sp. D25]
gi|423330208|ref|ZP_17307992.1| GTP-binding protein Era [Parabacteroides distasonis CL03T12C09]
gi|423339343|ref|ZP_17317084.1| GTP-binding protein Era [Parabacteroides distasonis CL09T03C24]
gi|256736800|gb|EEU50127.1| GTP-binding protein Era [Parabacteroides sp. D13]
gi|409230724|gb|EKN23585.1| GTP-binding protein Era [Parabacteroides distasonis CL09T03C24]
gi|409231824|gb|EKN24672.1| GTP-binding protein Era [Parabacteroides distasonis CL03T12C09]
gi|409237843|gb|EKN30638.1| GTP-binding protein Era [Parabacteroides sp. D25]
Length = 297
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 152/245 (62%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N+++G+++SI+T+K QTTRHRI+GI + + Q++ DTPG
Sbjct: 6 HKSGFVNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + + G +AD ++ + D + ++ +E L + P+LL+
Sbjct: 66 VLRPNYKLQESMLNFSQSALG-DADVLLYVTDVVETIDKNNEFLARV---QSIECPVLLL 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D E+ K + +++ E+IP+SA ++ ++ + +P P Y+ KD
Sbjct: 122 INKIDQTNQPELEKLVAQWKELLPKAEIIPISALSNFNIDYVKRRVEELMPDSPPYFEKD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K I+ I+VE+++QK
Sbjct: 182 ALTDKPARFFVTEIIREKILLYYQKEIPYAVEVVVELFKEDDELIH-IKALIIVERDTQK 240
Query: 353 IILIG 357
I+IG
Sbjct: 241 GIIIG 245
>gi|333904564|ref|YP_004478435.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333119829|gb|AEF24763.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|456370421|gb|EMF49317.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
gi|457095981|gb|EMG26452.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 299
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + + K +P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVIFMVPADEKRGKGDDMIIERLKNAK--IPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFKEVVPISALQGNNVNPLMEILKDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|318042122|ref|ZP_07974078.1| GTP-binding protein Era-like protein [Synechococcus sp. CB0101]
Length = 330
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 144/255 (56%), Gaps = 5/255 (1%)
Query: 105 FDYASHP-NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY 163
F+ P ++SG+VA++G+PNVGKSTL NQ++G+K++I + QTTR+R+ I + PE
Sbjct: 28 FELGQSPEGYRSGFVALVGRPNVGKSTLLNQLVGEKVAITSPIAQTTRNRLRAILTTPEA 87
Query: 164 QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH 223
Q++L DTPG I K H+L +++ R A D +++LVD + R D + E +
Sbjct: 88 QLVLVDTPG-IHKPHHLLGERLVQTARGAIGEVDLVLLLVDGSQPAGRGDGFIVELLS-- 144
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
+ P+ + LNK DL+ P + + Y + + PVSA G G E + + LP
Sbjct: 145 HARAPVHVALNKHDLVDPAQAIELEASYRELVPDWPLHPVSALNGDGTEALVSALSAALP 204
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE 343
GP YP D VS+ PE+ + E+IRE++ R EVP++ V + + +
Sbjct: 205 EGPHLYPPDAVSDQPEQLLLAELIREQVLQHTREEVPHSVAVQ-IERIVDDGPRTAVLAT 263
Query: 344 IVVEKNSQKIILIGK 358
+ VE+NSQK ILIGK
Sbjct: 264 VFVERNSQKGILIGK 278
>gi|344923434|ref|ZP_08776895.1| GTPase Era [Candidatus Odyssella thessalonicensis L13]
Length = 294
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 143/245 (58%), Gaps = 5/245 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
K G++AV+G PN GKSTL NQ++GQK+SIV+ K QTTR R+LGI + Q++L DTPGI
Sbjct: 3 KFGFIAVIGVPNAGKSTLINQLVGQKVSIVSPKVQTTRQRVLGIAMVDQAQLVLIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K LD M+ AG AD I+++VDA + + E + + + + I+LVL
Sbjct: 63 FTPK-KRLDRAMVATAWEAGKEADQIILIVDASQKNQSPSEQILASLENRQ----IVLVL 117
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + + K E Y+++T V ++ VSA G GV D+ ++ K P GP +P+D
Sbjct: 118 NKVDAVDKTRLLKLAESYQRYTQVKDIFMVSALTGDGVSDLAAYLADKAPEGPWMFPEDD 177
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ P+R + EI RE+++ Q E+PY V +++ I I V + +QK
Sbjct: 178 ITDMPQRLWAAEITREQLYHQLHQELPYDTFVESEAWEEFENGSVKIHQVIYVSRPNQKS 237
Query: 354 ILIGK 358
I++GK
Sbjct: 238 IILGK 242
>gi|339301091|ref|ZP_08650213.1| GTP-binding protein Era [Streptococcus agalactiae ATCC 13813]
gi|319745497|gb|EFV97801.1| GTP-binding protein Era [Streptococcus agalactiae ATCC 13813]
Length = 314
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 19 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 78
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 79 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 135
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 136 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQ 195
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 196 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 255
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 256 GIIIGKQGAML 266
>gi|440680542|ref|YP_007155337.1| GTP-binding protein Era-like-protein [Anabaena cylindrica PCC 7122]
gi|428677661|gb|AFZ56427.1| GTP-binding protein Era-like-protein [Anabaena cylindrica PCC 7122]
Length = 324
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 25/288 (8%)
Query: 89 KPDRNMASPDDYEIEEFDYASH-------PNHKSGYVAVLGKPNVGKSTLANQMIGQKLS 141
K + N++S D+Y F +A P KSG++ ++G+PNVGKSTL N ++GQK++
Sbjct: 2 KLESNVSSIDNYT---FSFAGEVTIPQAPPEFKSGFIGIIGRPNVGKSTLMNHLVGQKIA 58
Query: 142 IVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVV 201
I + QTTR+R+ GI + Q+I DTPG I K H L +++KN + A + D ++
Sbjct: 59 ITSPISQTTRNRLRGILTTEAAQLIFVDTPG-IHKPHHQLGEVLVKNAKLAIESVDVVLF 117
Query: 202 LVD---ACKAPER-IDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDV 257
+VD AC +R I E+L + + P++L +NK D +P + K + Y +
Sbjct: 118 VVDGTVACGGGDRYIAELLS------RSQTPVILGINKIDE-QPSDFQKLDDSYTQLAAE 170
Query: 258 D--EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQY 315
+++ SAK G G+ ++++ ++ L GP YYP D+V++ PERF +GE+IRE+I +
Sbjct: 171 HQWQMVKFSAKTGAGLPELQELLIGNLETGPFYYPPDLVTDQPERFIMGELIREQILLLT 230
Query: 316 RNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
R EVP++ + + + P A + I VE++SQK ILIGK L
Sbjct: 231 REEVPHSVAIAIDLVEETP-AITRVLATINVERDSQKGILIGKGGTML 277
>gi|315038512|ref|YP_004032080.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112]
gi|312276645|gb|ADQ59285.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112]
Length = 301
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 141/241 (58%), Gaps = 10/241 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDDMQIVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I ++L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEKIGKGDQYIADLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLEGFKEILPISATQGIGIEDLLATLNKYLPEGPQYYS 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D +++ PE F V E+IRE+I EVP+A V V K I+ I VE++
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVAVDQMNKHQNGKLVIEATIYVERDG 239
Query: 351 Q 351
Q
Sbjct: 240 Q 240
>gi|330997749|ref|ZP_08321588.1| ribosome biogenesis GTPase Era [Paraprevotella xylaniphila YIT
11841]
gi|329569848|gb|EGG51606.1| ribosome biogenesis GTPase Era [Paraprevotella xylaniphila YIT
11841]
Length = 294
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 149/246 (60%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q+ DTPG
Sbjct: 3 HKAGFVNIVGNPNVGKSTLMNLLVGERISIATFKAQTTRHRIMGILNTEDMQICFSDTPG 62
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ + LE+ K +P+L++
Sbjct: 63 VLKPNYKLQESMLNFS-ESALQDADVLLYVTDMVETPDKNGDFLEKV---SKMDVPVLVL 118
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D+ E+ K+E + E+IP+SA ++ + + I LP P Y+ KD
Sbjct: 119 INKIDVSNQQELTSKVEAWHAVLPKAEIIPISALCKFNIDTVLNRIKDLLPDSPPYFGKD 178
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
++ P RFFV EIIREKI + Y E+PY+ +V V +K AK I I VE+ SQ
Sbjct: 179 QWTDKPARFFVTEIIREKILLYYDKEIPYSVEVVVERFKE--AAKSIHINAVIYVERESQ 236
Query: 352 KIILIG 357
K I+IG
Sbjct: 237 KGIIIG 242
>gi|260589683|ref|ZP_05855596.1| GTP-binding protein Era [Blautia hansenii DSM 20583]
gi|331083115|ref|ZP_08332232.1| GTP-binding protein Era [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539923|gb|EEX20492.1| GTP-binding protein Era [Blautia hansenii DSM 20583]
gi|330405117|gb|EGG84654.1| GTP-binding protein Era [Lachnospiraceae bacterium 6_1_63FAA]
Length = 301
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 152/258 (58%), Gaps = 14/258 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N +IGQK++I + KPQTTR++I + +G + Q++ DTP
Sbjct: 4 DFKSGFVAIIGRPNVGKSTLMNHLIGQKIAITSRKPQTTRNKIQTVYTGEKGQIVFLDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK---APER-IDEILEEGVGDHKDKL 227
GI + K + L M+ + +AD I+ LV+ A ER I E L+ KL
Sbjct: 64 GIHKAK-NKLGEYMVNVAQRTFKDADVILWLVEPTSYIGAGERHIAEQLKNC------KL 116
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P++LV+NK D +K EIA ++ Y K + +++P SA ++ + D I LP GP
Sbjct: 117 PVILVINKVDTVKKSEIAGFIDGYRKLYNFSDIVPASALRAQNLDTVLDCIFKYLPYGPM 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IV 345
+Y +D +++ P+R V E+IREK E+P+ V + K R T KD + ++ I+
Sbjct: 177 FYDEDTITDQPQRQIVAEMIREKALRTLDEEIPHGIAVTIDQMKER-TDKDLVDIDATII 235
Query: 346 VEKNSQKIILIGKVSPFL 363
E++S K I+IGK L
Sbjct: 236 CERDSHKGIIIGKQGAML 253
>gi|312898794|ref|ZP_07758182.1| GTP-binding protein Era [Megasphaera micronuciformis F0359]
gi|310619956|gb|EFQ03528.1| GTP-binding protein Era [Megasphaera micronuciformis F0359]
Length = 300
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 144/250 (57%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N++I QK++IV++K QTTR++IL I + E Q+I DTPGI
Sbjct: 8 KSGFVAVVGRPNVGKSTLINRIIRQKVTIVSDKAQTTRNKILCIHTDDECQIIFLDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M SA + D V LV A + D + V D +P+ LV+
Sbjct: 68 HKPK-HKLGRFMDDAAFSALHDIDAAVFLVAADEKRGPGDMFVLNKVKDAG--VPVFLVI 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + +I + Y + D +IPVSA G V+ + D + L GP Y+P D+
Sbjct: 125 NKTDKVDKKKIPAVIADYSQLYDFAGIIPVSALNGDNVDIVTDELKKILQPGPKYFPDDM 184
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER V EI+REK+ R EVP+A V R K +I+V + VE+ SQK
Sbjct: 185 ITDQPERLLVSEIVREKLLRATREEVPHAVAVFTEEMAKRDNDKVYIRVTVYVERESQKR 244
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 245 IVIGKNGAVL 254
>gi|310828430|ref|YP_003960787.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308740164|gb|ADO37824.1| hypothetical protein ELI_2843 [Eubacterium limosum KIST612]
Length = 304
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 153/259 (59%), Gaps = 20/259 (7%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKSTL N ++G+KL I NKPQTTR+ I I + + QM+ DTPG+
Sbjct: 12 KSGFISIIGRPNVGKSTLLNSIMGEKLVITANKPQTTRNAIRCIHTDADSQMVFIDTPGM 71
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHK--DKL---- 227
+ K + L + M+K+ + D ++ LV+ PE D I G GD DKL
Sbjct: 72 HKPK-NKLGAFMLKSAEDTISDVDVVLFLVE----PE--DRI---GPGDQYILDKLAGSR 121
Query: 228 -PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
P+LL++NK D + E+ K + Y+ +T +D +IPVSA G GV+++ I L GP
Sbjct: 122 TPVLLIINKIDTVPKEELLKTIAAYQDYTFLDSIIPVSAWNGDGVQELLAAIKKHLEPGP 181
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--I 344
Y+P D+V + ERF VGE+IREK+ ++EVP+ V V K R K+ I ++ I
Sbjct: 182 MYFPPDMVVDQSERFIVGELIREKVLHLLKDEVPHGVAVEVTKMKARED-KNIIDIDATI 240
Query: 345 VVEKNSQKIILIGKVSPFL 363
E+ + K ILIGK L
Sbjct: 241 FCERKTHKGILIGKQGSML 259
>gi|124023647|ref|YP_001017954.1| GTP-binding protein Era [Prochlorococcus marinus str. MIT 9303]
gi|123963933|gb|ABM78689.1| GTP-binding protein Era [Prochlorococcus marinus str. MIT 9303]
Length = 343
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++SG+VA++G+PNVGKSTL NQ++G+K++I + QTTR+R+ I + PE QM+L DTP
Sbjct: 39 GYRSGFVALIGRPNVGKSTLVNQLVGEKVAITSPVAQTTRNRLRAIVTTPEAQMVLVDTP 98
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G I K H+L ++++ R+A D +++L++ C+ P R D + E + + LP+L+
Sbjct: 99 G-IHKPHHLLGERLVQSARAAIGEVDLVLLLLEGCEPPGRGDAFIVELL--RQQDLPVLV 155
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV---SAKYGHGVEDIRDWILTKLPLGPAY 288
LNK D + + E Y + D P+ SA G G + + ++ +LPLGP
Sbjct: 156 ALNKWDRVAEQQHDPAEEAYRQLL-ADSAWPLIRCSAISGEGCNGLVEALVGQLPLGPQL 214
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTA--------KDFI 340
YP ++V + PER + E+IRE++ M R EVP++ V++ + P A + +
Sbjct: 215 YPAEMVCDQPERVLLAELIREQVLMHTREEVPHSVAVSIDRVEEMPVANGRPGKQGRTAV 274
Query: 341 QVEIVVEKNSQKIILIGKVSPFL 363
++VE+ SQK ILIGK L
Sbjct: 275 LATVLVERKSQKGILIGKGGSML 297
>gi|386362248|ref|YP_006071579.1| GTP-binding protein Era [Streptococcus pyogenes Alab49]
gi|350276657|gb|AEQ24025.1| GTP-binding protein Era [Streptococcus pyogenes Alab49]
Length = 298
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|419776578|ref|ZP_14302500.1| GTP-binding protein Era [Streptococcus intermedius SK54]
gi|383845989|gb|EID83389.1| GTP-binding protein Era [Streptococcus intermedius SK54]
Length = 299
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + R D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGRGDDMIMERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + E++P+SA G+ V + + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMEFKEIVPISALQGNNVSRLMELLKENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|294791925|ref|ZP_06757073.1| GTP-binding protein Era [Veillonella sp. 6_1_27]
gi|294457155|gb|EFG25517.1| GTP-binding protein Era [Veillonella sp. 6_1_27]
Length = 307
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 149/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+
Sbjct: 16 KSGFVAVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDEAKQIVFMDTPGV 75
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + ++ +V + D + E + + K+P+ LV+
Sbjct: 76 HKPK-HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVV 132
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +K E+ + + Y+ VIP+SAK + +I + LP GP Y+P+D+
Sbjct: 133 NKIDTLKKEELLEAIVSYQDAYPFAGVIPISAKDKENLSEILKVLEESLPEGPQYFPEDM 192
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER + +IIREKI + R+E+P+A V+V KTR +I+ I E++SQK
Sbjct: 193 ITDQPERLIISDIIREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKG 252
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 253 IIIGKKGALL 262
>gi|317051559|ref|YP_004112675.1| GTP-binding protein Era [Desulfurispirillum indicum S5]
gi|316946643|gb|ADU66119.1| GTP-binding protein Era [Desulfurispirillum indicum S5]
Length = 300
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 156/249 (62%), Gaps = 4/249 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ +SG+V ++G+PNVGKSTL +IG+K+SI+++KPQTTR+RI+G+ G ++Q++ DTP
Sbjct: 2 SFRSGFVGIVGRPNVGKSTLMGAIIGEKISIISDKPQTTRNRIMGVWHGDDFQVVFLDTP 61
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK-APERIDEILEEGVGDHKDKLPIL 230
G+ + K + ++ M+ S D ++++V+ + + + +L E H++ P+
Sbjct: 62 GVHKGK-YGINDFMLNTAFSVLSEVDILLLVVEYWETGGQEFNLLLGELRSRHRELPPVF 120
Query: 231 LVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LV+NK DL + EI + + + D +IPVSA G ++ ++ I+ ++ GP Y+
Sbjct: 121 LVVNKIDLAEDKHEILESIARQKDLFDFAGIIPVSALNGENLDRLKALIVEQMEEGPRYF 180
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+D++++ ERF V E IREK+F+ R+E+P++ V V + T + I I VE++
Sbjct: 181 PEDMITDQSERFLVAEFIREKVFVLTRDEIPHSIAVQVEQFVTEEN-RLVISACIYVERD 239
Query: 350 SQKIILIGK 358
SQK ++IGK
Sbjct: 240 SQKGMIIGK 248
>gi|410594897|ref|YP_006951624.1| GTPase Era [Streptococcus agalactiae SA20-06]
gi|421532350|ref|ZP_15978714.1| GTPase Era [Streptococcus agalactiae STIR-CD-17]
gi|403642426|gb|EJZ03272.1| GTPase Era [Streptococcus agalactiae STIR-CD-17]
gi|410518536|gb|AFV72680.1| GTPase Era [Streptococcus agalactiae SA20-06]
Length = 299
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K +L M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKT-VLGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|333378284|ref|ZP_08470015.1| GTP-binding protein Era [Dysgonomonas mossii DSM 22836]
gi|332883260|gb|EGK03543.1| GTP-binding protein Era [Dysgonomonas mossii DSM 22836]
Length = 293
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 153/248 (61%), Gaps = 11/248 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+K+SI+T+K QTTRHRILGI + EYQ++ DTPG
Sbjct: 2 HKSGFVNIVGNPNVGKSTLMNLLVGEKVSIITSKAQTTRHRILGIVNTDEYQIVYSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + +SM+ + SA +AD ++ + D + ++ +E L++ G P+LL+
Sbjct: 62 VLRPNYKLQESMLNFS-ESALSDADVLLYMTDVVEKIDKNEEFLKKVQGVQA---PVLLL 117
Query: 233 LNKKDLIKPGEI-AKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D E+ A L W E + E+ P+SA + ++ I+ +P P Y+ K
Sbjct: 118 INKIDQTNQKELEALVLRWKELLPNA-EIYPISALNKFNADVVKKRIIDLIPESPPYFEK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKN 349
D +++ P RFFV EIIREKI + Y+ E+PY+ + V + KD I + I+VE++
Sbjct: 177 DALTDRPARFFVTEIIREKILLYYQKEIPYSVE---VVVEEFKEEKDIINIRALIIVERD 233
Query: 350 SQKIILIG 357
+QK I+IG
Sbjct: 234 TQKGIVIG 241
>gi|297568490|ref|YP_003689834.1| GTP-binding protein Era [Desulfurivibrio alkaliphilus AHT2]
gi|296924405|gb|ADH85215.1| GTP-binding protein Era [Desulfurivibrio alkaliphilus AHT2]
Length = 308
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 148/257 (57%), Gaps = 5/257 (1%)
Query: 105 FDYASHPNH-KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEY 163
+ A P+ G+VA++G PN GKSTL N ++GQK+SIV+ KPQTTR+R+LG+ + P
Sbjct: 1 MNAAPSPDEITCGFVALVGPPNAGKSTLLNNLLGQKISIVSPKPQTTRNRVLGVFNQPTR 60
Query: 164 QMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDAC--KAPERIDEILEEGVG 221
Q++ DTPG+ + + L+S M+K R D + ++D +A R ++ + G
Sbjct: 61 QIVFLDTPGLHQGR-SRLNSEMVKIARRTVSEVDAVAYMIDVSSPEADSRPEQRRQAGQL 119
Query: 222 DHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
+ LP LL+ NK D + ++ + +++ +IP+SA G G E + D +
Sbjct: 120 LQRANLPALLLCNKIDQVGKEKLLPVIAAWQEVYPFAAIIPLSALSGEGQETLLDELTRL 179
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK-DFI 340
LP GP +P+DI ++ ERF GEIIREKI + R+E+PY+ V + ++ I
Sbjct: 180 LPRGPRLFPEDIPTDASERFLCGEIIREKIMLLTRDELPYSTAVLIDRFREESAPPLTTI 239
Query: 341 QVEIVVEKNSQKIILIG 357
I+VEKNSQK I+IG
Sbjct: 240 DATIIVEKNSQKGIIIG 256
>gi|51891672|ref|YP_074363.1| Era family GTP-binding protein [Symbiobacterium thermophilum IAM
14863]
gi|51855361|dbj|BAD39519.1| Era family GTP-binding protein [Symbiobacterium thermophilum IAM
14863]
Length = 316
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 148/273 (54%), Gaps = 32/273 (11%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+ +++G+PNVGKSTL N + KL+I+++KPQTTR+RILG+ + P+ Q++ DTPGI
Sbjct: 7 RSGFCSIVGRPNVGKSTLLNAFVAAKLAIMSDKPQTTRNRILGVYNRPDAQVVFLDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 226
K H L M K D ++ +VD + E G GD +
Sbjct: 67 -HKPRHRLGEYMNKVAIGTIPEVDVVLFVVDGS--------VPEPGEGDRYVADVVARSG 117
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD----------------EVIPVSAKYGHG 270
P +LV+NK D +K G+ ++ Y+ + +++PVSA
Sbjct: 118 RPAILVVNKMDRVKRGDWYAVMDAYKALAQPEARSENPDPGAPTIEWIDIVPVSALEHKN 177
Query: 271 VEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY 330
++ + D I+ ++ GP YYP+D++++ PERF + E IREKI R+EVP++ V V
Sbjct: 178 IDALLDLIVQQMEEGPKYYPEDMITDQPERFVIAEFIREKILQLTRDEVPHSVAVEVEEL 237
Query: 331 KTRPTAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
+ RPT ++ I VE+ SQK I+IGK L
Sbjct: 238 QRRPTGTVYVSASIYVERESQKGIIIGKRGAML 270
>gi|313893315|ref|ZP_07826890.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442211|gb|EFR60628.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str.
F0412]
Length = 299
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 152/255 (59%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+VAV+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++
Sbjct: 3 NNEHFKSGFVAVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDEAKQIVFM 62
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPG+ + K H L M+ + + ++ +V + D + E + + K+P
Sbjct: 63 DTPGVHKPK-HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--QRVKVP 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D +K E+ + + Y+ VIP+SAK + +I + LP GP Y
Sbjct: 120 VFLVVNKIDTLKKEELLEAIVSYQNAYPFAGVIPISAKDKENLPEILKVLEETLPEGPQY 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
+P+D++++ PER + +I+REKI + R+E+P+A V+V KTR +I+ I E+
Sbjct: 180 FPEDMITDQPERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCER 239
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 240 DSQKGIIIGKKGALL 254
>gi|282850278|ref|ZP_06259657.1| GTP-binding protein Era [Veillonella parvula ATCC 17745]
gi|416998951|ref|ZP_11939620.1| ribosome biogenesis GTPase Era [Veillonella parvula
ACS-068-V-Sch12]
gi|282579771|gb|EFB85175.1| GTP-binding protein Era [Veillonella parvula ATCC 17745]
gi|333977104|gb|EGL77963.1| ribosome biogenesis GTPase Era [Veillonella parvula
ACS-068-V-Sch12]
Length = 299
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 149/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+
Sbjct: 8 KSGFVAVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDESKQIVFMDTPGV 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + ++ +V + D + E + + K+P+ LV+
Sbjct: 68 HKPK-HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVV 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +K E+ + + Y+ VIP+SAK + +I + LP GP Y+P+D+
Sbjct: 125 NKIDTLKKEELLEAIVSYQDAYPFAGVIPISAKDKENLSEILKVLEETLPEGPQYFPEDM 184
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK
Sbjct: 185 ITDQPERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKG 244
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 245 IIIGKKGALL 254
>gi|269798051|ref|YP_003311951.1| GTP-binding protein Era [Veillonella parvula DSM 2008]
gi|269094680|gb|ACZ24671.1| GTP-binding protein Era [Veillonella parvula DSM 2008]
Length = 299
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 149/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+
Sbjct: 8 KSGFVAVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDESKQIVFMDTPGV 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + ++ +V + D + E + + K+P+ LV+
Sbjct: 68 HKPK-HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVV 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +K E+ + + Y+ VIP+SAK + +I + LP GP Y+P+D+
Sbjct: 125 NKIDTLKKEELLEAIVSYQDAYPFAGVIPISAKDKENLSEILKVLEETLPEGPQYFPEDM 184
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK
Sbjct: 185 ITDQPERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKG 244
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 245 IIIGKKGALL 254
>gi|262278197|ref|ZP_06055982.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter calcoaceticus RUH2202]
gi|262258548|gb|EEY77281.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter calcoaceticus RUH2202]
Length = 342
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 149/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K D +LE+ ++P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAYKWTPNDDLVLEKL---KNAEMPVIL 152
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + +I ++ K + E++PVSA G +E + + I LP Y
Sbjct: 153 VINKADTFEDKRDILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQAPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-----------F 339
D +++ ERF EIIREKI Q E+PY V + S+KT A + +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEAAVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRAGQKAIVIGE 291
>gi|22537642|ref|NP_688493.1| GTP-binding protein Era [Streptococcus agalactiae 2603V/R]
gi|25011601|ref|NP_735996.1| GTP-binding protein Era [Streptococcus agalactiae NEM316]
gi|76787745|ref|YP_330131.1| GTP-binding protein Era [Streptococcus agalactiae A909]
gi|77405197|ref|ZP_00782295.1| GTP-binding protein Era [Streptococcus agalactiae H36B]
gi|77413995|ref|ZP_00790168.1| GTP-binding protein Era [Streptococcus agalactiae 515]
gi|417005903|ref|ZP_11944473.1| GTP-binding protein Era [Streptococcus agalactiae FSL S3-026]
gi|421147192|ref|ZP_15606883.1| GTPase Era [Streptococcus agalactiae GB00112]
gi|81453614|sp|Q8DYI1.1|ERA_STRA5 RecName: Full=GTPase Era
gi|81744499|sp|Q8E443.1|ERA_STRA3 RecName: Full=GTPase Era
gi|123601489|sp|Q3K022.1|ERA_STRA1 RecName: Full=GTPase Era
gi|22534528|gb|AAN00366.1|AE014260_22 GTP-binding protein Era [Streptococcus agalactiae 2603V/R]
gi|24413141|emb|CAD47219.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562802|gb|ABA45386.1| GTP-binding protein Era [Streptococcus agalactiae A909]
gi|77159975|gb|EAO71113.1| GTP-binding protein Era [Streptococcus agalactiae 515]
gi|77176199|gb|EAO78970.1| GTP-binding protein Era [Streptococcus agalactiae H36B]
gi|341576084|gb|EGS26495.1| GTP-binding protein Era [Streptococcus agalactiae FSL S3-026]
gi|401686137|gb|EJS82126.1| GTPase Era [Streptococcus agalactiae GB00112]
Length = 299
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|90420863|ref|ZP_01228768.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
gi|90334838|gb|EAS48610.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
Length = 320
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 9/270 (3%)
Query: 91 DRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTT 150
D N D E A P +SG+VA+LG PN GKSTL NQ++G K+SIVT+K QTT
Sbjct: 4 DDNTTGIDTTEAGATPAAEGPT-RSGFVALLGAPNAGKSTLVNQLVGTKVSIVTHKVQTT 62
Query: 151 RHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-P 209
R + GI Q++ DTPG+ K LD M++ S +AD ++ ++DA +
Sbjct: 63 RALVRGIAMRDRTQIVFVDTPGVFAPK-RRLDRAMVRTAWSGARDADIVLAIIDADRGIN 121
Query: 210 ERIDEILEEGVGDHKD-KLPILLVLNKKDLIKPGEI-AKKLEWYEKFTDVDEVIPVSAKY 267
E ++ ILE KD K P +L+LNK D ++ + + E+ DE+ +SA
Sbjct: 122 EEVETILER----LKDVKQPKVLLLNKVDQMRRDRLLGLTQQITERGVAFDEIFMISALN 177
Query: 268 GHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV 327
G G D+ D++ LP GP YYP+D +++ P R EI REK++++ E+PY+ V
Sbjct: 178 GSGCGDLMDYLAKALPEGPWYYPEDQITDLPLRQLAAEITREKLYLRLHQELPYSSHVET 237
Query: 328 VSYKTRPTAKDFIQVEIVVEKNSQKIILIG 357
++TR I+ I VE++SQK I+IG
Sbjct: 238 ELWETRQDGSVRIEQTIYVERDSQKRIVIG 267
>gi|77408568|ref|ZP_00785304.1| GTP-binding protein Era [Streptococcus agalactiae COH1]
gi|77172842|gb|EAO75975.1| GTP-binding protein Era [Streptococcus agalactiae COH1]
Length = 299
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVIVESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|81428488|ref|YP_395488.1| GTP-binding protein Era [Lactobacillus sakei subsp. sakei 23K]
gi|78610130|emb|CAI55179.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 300
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++SG+VA++G+PNVGKST N+MIG+K++I+++K QTTR++I GI + Q++ DTPG
Sbjct: 5 YRSGFVAIVGRPNVGKSTFMNRMIGEKIAIMSSKAQTTRNKIQGIYTDDNAQIVFVDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K + LD M + S D I+ ++ D+ + + + + K P+ LV
Sbjct: 65 I-HKPHNELDEYMDQAALSTFNEVDAILFMISGVDKKGPGDQYIMDQLKNVKK--PVYLV 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D I P ++ +E Y D V P+SA G+ V ++ + LP GP YYP+D
Sbjct: 122 VNKIDAIHPDDLLPMIEQYRHELDFKAVYPISALEGNNVPEMLKELELTLPEGPQYYPED 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPE F VGE+IREKI EVP++ V V K R K I+ I+VE++ QK
Sbjct: 182 QLTDHPEYFVVGELIREKILELTHEEVPHSVAVVVERMKDRVNGKLQIEANIIVERDGQK 241
Query: 353 IILIGK 358
I+IG+
Sbjct: 242 RIIIGQ 247
>gi|238019235|ref|ZP_04599661.1| hypothetical protein VEIDISOL_01099 [Veillonella dispar ATCC 17748]
gi|237863934|gb|EEP65224.1| hypothetical protein VEIDISOL_01099 [Veillonella dispar ATCC 17748]
Length = 299
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +IG K++IV++K QTTR+RI+ + + Q++ DTPG+
Sbjct: 8 KSGFVAVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDEAKQIVFMDTPGV 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + ++ +V + D + E + + K+P+ LV+
Sbjct: 68 HKPK-HKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQL--KRVKVPVFLVV 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +K E+ + + Y+ VIP+SAK + ++ + + LP GP Y+P+D+
Sbjct: 125 NKIDTLKKEELLEAIVSYQDAYPFAGVIPISAKDKENLNEVLNVLEETLPEGPQYFPEDM 184
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER + +I+REKI + R+E+P+A V+V KTR +I+ I E++SQK
Sbjct: 185 ITDQPERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERDSQKG 244
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 245 IIIGKKGALL 254
>gi|291542200|emb|CBL15310.1| GTP-binding protein Era [Ruminococcus bromii L2-63]
Length = 305
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 149/251 (59%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KS ++A++G+PNVGKS++ N+++GQK++IV++KPQTTR+RI G+ + EYQ++ +DTPG+
Sbjct: 9 KSAFIAIVGRPNVGKSSILNRLMGQKIAIVSSKPQTTRNRITGVLTQGEYQLVFFDTPGM 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K L M+++V + DC +++V+A K P + L E ++P +L +
Sbjct: 69 HKPKTS-LGKYMVRSVNESVGGVDCCMLVVEAGKEPGDTELNLIEKFKSM--EMPAILAI 125
Query: 234 NKKDLIKPG-EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK D +K E+ K++ Y D D V+PVSA+ G+G+ ++ D + + G ++ D
Sbjct: 126 NKIDTLKEKEELMKQIARYSLLYDFDAVVPVSAQDGNGMNELLDELKKQAGEGGHFFDDD 185
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ PER V EIIREKI E+P+ V + KTR I I EK + K
Sbjct: 186 TLTDQPERVIVAEIIREKILRLCDREIPHGTAVVIEKMKTRDNGMLDIDATIFCEKETHK 245
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 246 RIIIGKNGSML 256
>gi|400289110|ref|ZP_10791142.1| GTPase Era [Psychrobacter sp. PAMC 21119]
Length = 377
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 173/324 (53%), Gaps = 37/324 (11%)
Query: 49 VLSEKEVQQQKLWSNQREMDLDDGDEMEFDDASSFLSLSE--KPDRNMASPDDYEIEEFD 106
+L E++ L S E +E E +D + L++ E P+ N + DD+
Sbjct: 27 ILENAELKSADLNSEHSE-----NNEAESNDVENDLAIEEFFSPNNNASMADDF------ 75
Query: 107 YASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMI 166
K+GYVA++G+PNVGKSTL N ++GQKLSI + KPQTTRHRI GI S E Q +
Sbjct: 76 -------KAGYVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHRIHGILSNHEMQAV 128
Query: 167 LYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILE-EGVGDHKD 225
DTPGI ++ ++ M K SA ++ D ++ +VD+ + R D++L + +GD
Sbjct: 129 FVDTPGIHRNEVRAINERMNKAAVSALVDVDLVLFVVDSDQW--RDDDLLVLQKLGDT-- 184
Query: 226 KLPILLVLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
L ++LV+NK D +K G + +E + D +++PVSA ++ +++ I + LP+
Sbjct: 185 NLTVVLVINKADTLKDKGSVLPLMETFNDSFDFADIVPVSALKNQNLDRLQEVIASHLPI 244
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD------ 338
Y + +++ ERF EIIREKI +EVPY V + +K P D
Sbjct: 245 AAPIYDTEQITDRSERFLASEIIREKIMRSAGDEVPYDLTVQIDGFKDEPAHTDPKTGRP 304
Query: 339 -----FIQVEIVVEKNSQKIILIG 357
FI I VE++ QK I+IG
Sbjct: 305 RKACTFIDATIYVERSGQKAIVIG 328
>gi|189037675|sp|Q1JI67.1|ERA_STRPD RecName: Full=GTPase Era
gi|94543408|gb|ABF33456.1| GTP-binding protein era [Streptococcus pyogenes MGAS10270]
Length = 298
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMIREKVLHFTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|85712959|ref|ZP_01043998.1| GTPase Era [Idiomarina baltica OS145]
gi|85693197|gb|EAQ31156.1| GTPase Era [Idiomarina baltica OS145]
Length = 315
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 148/248 (59%), Gaps = 4/248 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N + G+VA++G+PNVGKST+ N+++GQK+SI ++KPQTTRHRILG+ + +YQ + DTP
Sbjct: 20 NKQCGFVAIVGRPNVGKSTMLNRILGQKVSITSSKPQTTRHRILGVDTEGDYQTVYVDTP 79
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ ++ ++ +M + SA + D I+ +V+ + + +LE+ K + PI+L
Sbjct: 80 GMHLEEPRAINRVMNQTASSALKDVDLILFVVENTRWNDDDVMVLEKL---KKTETPIVL 136
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D IK ++ L+W + V E+IPVSAK G +E +RD + L G +YP
Sbjct: 137 VVNKVDQIKDKNKLLPHLQWLSQQLSVKEIIPVSAKTGDNLEPLRDIVKGFLQSGYHFYP 196
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D V++ RF EIIREK+ E+PY V + + I I+VE+ +
Sbjct: 197 ADYVTDRSVRFMTAEIIREKLMRFTGEELPYETTVEIEQFGQSERGTHHIHALILVEREA 256
Query: 351 QKIILIGK 358
QK ++IG+
Sbjct: 257 QKRMVIGE 264
>gi|392428816|ref|YP_006469827.1| GTP-binding protein Era [Streptococcus intermedius JTH08]
gi|391757962|dbj|BAM23579.1| GTP-binding protein Era [Streptococcus intermedius JTH08]
Length = 325
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 30 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 89
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + R D+++ E + K+P++LV+
Sbjct: 90 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGRGDDMIMERL--KAAKIPVILVI 146
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + E++P+SA G+ V + + + L G Y+P+D
Sbjct: 147 NKIDKVHPDQLLEQIDDFRTQMEFKEIVPISALQGNNVSRLMELLKENLEEGFQYFPEDQ 206
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK
Sbjct: 207 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 266
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 267 GIIIGKQGAML 277
>gi|409386470|ref|ZP_11238868.1| GTP-binding protein Era [Lactococcus raffinolactis 4877]
gi|399206264|emb|CCK19783.1| GTP-binding protein Era [Lactococcus raffinolactis 4877]
Length = 311
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 153/246 (62%), Gaps = 4/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N ++GQK++I+++K QTTR++I GI + Q++ DTPGI
Sbjct: 16 KSGFVSIIGRPNVGKSTLLNHVMGQKIAIMSDKAQTTRNKIQGIYTTENEQIVFIDTPGI 75
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+++ S D ++ +V A + + D ++ E + + +P++LV+
Sbjct: 76 -HKPHNALGDYMVESAYSTLREVDTVLFMVPADEPRGKGDNMIIERL--KQANVPVILVV 132
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ +++ + D EV+P+SA G+ E + + + + L G Y+P D+
Sbjct: 133 NKIDKVHPDQLLAQIDDFRTQMDFKEVVPISALEGNNTEKLLEILKSNLEEGFKYFPDDM 192
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPE F VGE+IREK+ + R EVP++ V V S K T K I I VE+ SQK
Sbjct: 193 ITDHPEHFLVGEMIREKVLILTREEVPHSIAVTVDSMKRDEDTGKIHIMATIYVERKSQK 252
Query: 353 IILIGK 358
I++GK
Sbjct: 253 GIILGK 258
>gi|299769158|ref|YP_003731184.1| GTP-binding protein Era [Acinetobacter oleivorans DR1]
gi|298699246|gb|ADI89811.1| GTP-binding protein Era [Acinetobacter oleivorans DR1]
Length = 342
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 149/259 (57%), Gaps = 15/259 (5%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQKLSI + KPQTTRH+I+GI S + Q + DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G+ +K++ ++ MM + SA + + ++ ++DA K + D +LE+ ++P++L
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNLVLFVIDAYKWTQNDDLVLEKL---KNAEMPVIL 152
Query: 232 VLNKKDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
V+NK D + +I ++ K + E++PVSA G +E + + I LP Y
Sbjct: 153 VINKADTFEDKRDILPLIQERAKLMNFAEIVPVSALRGANLEHLSETIEKYLPYQAPLYS 212
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT-----------AKDF 339
D +++ ERF EIIREKI Q E+PY V + S+KT A +
Sbjct: 213 FDQITDRSERFLASEIIREKIMRQLGEELPYDLTVQIESFKTEEETVNEKTGRLKPACTY 272
Query: 340 IQVEIVVEKNSQKIILIGK 358
I I V++ QK I+IG+
Sbjct: 273 IDATIFVDRAGQKAIVIGE 291
>gi|417751566|ref|ZP_12399849.1| ribosome biogenesis GTPase Era [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333772621|gb|EGL49451.1| ribosome biogenesis GTPase Era [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 298
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRTTIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|329117153|ref|ZP_08245870.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020]
gi|326907558|gb|EGE54472.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020]
Length = 299
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVIFMVPADEKRGKGDDMIIERL--KTAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRNQMDFKEVVPISALQGNNVNPLMEILKDNLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREK+ + E+P++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKVLHLTQQEIPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|343524263|ref|ZP_08761221.1| GTP-binding protein Era [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343397912|gb|EGV10445.1| GTP-binding protein Era [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 299
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDMEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + R D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGRGDDMITERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + E++P+SA G+ V + + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMEFKEIVPISALQGNNVPRLMELLKENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVVIESMKREEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGALL 251
>gi|19745599|ref|NP_606735.1| GTP-binding protein Era [Streptococcus pyogenes MGAS8232]
gi|21909873|ref|NP_664141.1| GTP-binding protein Era [Streptococcus pyogenes MGAS315]
gi|28896432|ref|NP_802782.1| GTP-binding protein Era [Streptococcus pyogenes SSI-1]
gi|50913761|ref|YP_059733.1| GTP-binding protein Era [Streptococcus pyogenes MGAS10394]
gi|56808804|ref|ZP_00366518.1| COG1159: GTPase [Streptococcus pyogenes M49 591]
gi|71903042|ref|YP_279845.1| GTP-binding protein Era [Streptococcus pyogenes MGAS6180]
gi|94988021|ref|YP_596122.1| GTP-binding protein Era [Streptococcus pyogenes MGAS9429]
gi|94991907|ref|YP_600006.1| GTP-binding protein Era [Streptococcus pyogenes MGAS2096]
gi|139474287|ref|YP_001129003.1| GTP-binding protein Era [Streptococcus pyogenes str. Manfredo]
gi|209558959|ref|YP_002285431.1| GTP-binding protein Era [Streptococcus pyogenes NZ131]
gi|306827874|ref|ZP_07461142.1| GTP-binding protein Era [Streptococcus pyogenes ATCC 10782]
gi|383479577|ref|YP_005388471.1| GTP-binding protein Era [Streptococcus pyogenes MGAS15252]
gi|383493497|ref|YP_005411173.1| GTP-binding protein Era [Streptococcus pyogenes MGAS1882]
gi|417857388|ref|ZP_12502447.1| GTPase Era [Streptococcus pyogenes HKU QMH11M0907901]
gi|421892354|ref|ZP_16323032.1| GTP-binding protein Era [Streptococcus pyogenes NS88.2]
gi|54037044|sp|P64088.1|ERA_STRP8 RecName: Full=GTPase Era
gi|73919338|sp|Q5XDG3.1|ERA_STRP6 RecName: Full=GTPase Era
gi|123640374|sp|Q48UW6.1|ERA_STRPM RecName: Full=GTPase Era
gi|189037673|sp|Q1JD46.1|ERA_STRPB RecName: Full=GTPase Era
gi|189037674|sp|Q1JN21.1|ERA_STRPC RecName: Full=GTPase Era
gi|189037677|sp|A2RG20.1|ERA_STRPG RecName: Full=GTPase Era
gi|226741243|sp|B5XK74.1|ERA_STRPZ RecName: Full=GTPase Era
gi|342162553|sp|P0DA96.1|ERA_STRP3 RecName: Full=GTPase Era
gi|342162554|sp|P0DA97.1|ERA_STRPQ RecName: Full=GTPase Era
gi|19747725|gb|AAL97234.1| putative GTP-binding protein [Streptococcus pyogenes MGAS8232]
gi|21904060|gb|AAM78944.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811683|dbj|BAC64615.1| putative GTP binding protein [Streptococcus pyogenes SSI-1]
gi|50902835|gb|AAT86550.1| GTP-binding protein era [Streptococcus pyogenes MGAS10394]
gi|71802137|gb|AAX71490.1| putative GTP-binding protein [Streptococcus pyogenes MGAS6180]
gi|94541529|gb|ABF31578.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
gi|94545415|gb|ABF35462.1| GTP-binding protein era [Streptococcus pyogenes MGAS2096]
gi|134272534|emb|CAM30799.1| GTP-binding protein Era homolog [Streptococcus pyogenes str.
Manfredo]
gi|209540160|gb|ACI60736.1| GTP-binding protein Era [Streptococcus pyogenes NZ131]
gi|304429922|gb|EFM32963.1| GTP-binding protein Era [Streptococcus pyogenes ATCC 10782]
gi|378927567|gb|AFC65773.1| GTP-binding protein Era [Streptococcus pyogenes MGAS15252]
gi|378929225|gb|AFC67642.1| GTP-binding protein Era [Streptococcus pyogenes MGAS1882]
gi|379981910|emb|CCG26754.1| GTP-binding protein Era [Streptococcus pyogenes NS88.2]
gi|387934343|gb|EIK42456.1| GTPase Era [Streptococcus pyogenes HKU QMH11M0907901]
Length = 298
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|160901780|ref|YP_001567361.1| GTP-binding protein Era [Petrotoga mobilis SJ95]
gi|160359424|gb|ABX31038.1| GTP-binding protein Era [Petrotoga mobilis SJ95]
Length = 306
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 151/249 (60%), Gaps = 9/249 (3%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+ GKPNVGKSTL N ++GQK+ IV++K QTTR+R+ I + YQ++ DTPGI
Sbjct: 7 KSGFVALAGKPNVGKSTLINALLGQKVVIVSDKTQTTRNRVNCILTEDHYQIVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K I + M+ +A D I+ ++DA D + E V K K+P +L++
Sbjct: 67 -HKPIRKIGEYMVNIAINALKGVDLILFIIDAKDGLRNSDLRVTEIV--DKSKIPTILLV 123
Query: 234 NKKDLIKPGE----IAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
NK DL+K E + +K++ +++ + I +SA G + +++ I+ LP GP YY
Sbjct: 124 NKVDLVKDKEKINLMTEKIQSL--CSNIVKTIEISALTGKNLSELKQSIIDLLPEGPQYY 181
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+D++++ P RF + E+IREKIF + E+P++ V V K R +++ EI VEK
Sbjct: 182 PEDMITDKPSRFIISELIREKIFHLTKEEIPHSSGVVVEELKERENGVLYVRAEIYVEKK 241
Query: 350 SQKIILIGK 358
SQK I+IGK
Sbjct: 242 SQKPIIIGK 250
>gi|282897000|ref|ZP_06305002.1| Small GTP-binding protein, era -like protein [Raphidiopsis brookii
D9]
gi|281197652|gb|EFA72546.1| Small GTP-binding protein, era -like protein [Raphidiopsis brookii
D9]
Length = 308
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 159/268 (59%), Gaps = 16/268 (5%)
Query: 103 EEFDYASHP-NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 161
EEF P N KSG++ ++G+PNVGKSTL NQ+IGQK++I + QTTR+R+ GI +
Sbjct: 3 EEFIIPQAPANFKSGFIGIIGRPNVGKSTLMNQLIGQKIAITSPVAQTTRNRLRGILTRE 62
Query: 162 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPER-IDEILE 217
+ Q+I DTPG I K H L ++++N + A + D ++ +VD C +R I ++L
Sbjct: 63 KAQLIFVDTPG-IHKPHHPLGEVLVQNAKIAITSVDVVLFVVDGTAVCGGGDRFIADLLS 121
Query: 218 EGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD--EVIPVSAKYGHGVEDIR 275
K ++P+++ +NK D +P E K E Y + + +++ SA G+ ++
Sbjct: 122 ------KCEIPVIMGINKIDQ-QPVETEKIDESYRELARENQWQIVKFSALENQGILELE 174
Query: 276 DWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT 335
D ++ +L GP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + + PT
Sbjct: 175 DLLIEQLETGPLYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEENPT 234
Query: 336 AKDFIQVEIVVEKNSQKIILIGKVSPFL 363
+ I VE++SQK ILIGK L
Sbjct: 235 ITRVVAT-INVERDSQKGILIGKGGTML 261
>gi|290769994|gb|ADD61761.1| putative protein [uncultured organism]
Length = 322
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 148/263 (56%), Gaps = 14/263 (5%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A + K+G+V +G+PNVGKSTL NQ+IGQK++I +NKPQTTR+RI + + Q++
Sbjct: 18 AENTRTKTGFVTFIGRPNVGKSTLMNQIIGQKIAITSNKPQTTRNRIQTVYTDERGQIVF 77
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDH 223
DTPGI + K + L M+ D I LV+ A E I E L+E
Sbjct: 78 VDTPGIHKAK-NKLGEYMVGAAEKTISEVDLICWLVEPTTHLGAAEEHIVEKLKEC---- 132
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K PI+LV+NK D IK EI ++ Y K D +++PV A+ G+ V+D+ D I + L
Sbjct: 133 --KTPIVLVINKTDTIKKEEILPVIDCYRKELDFVDIVPVCARNGNNVDDLLDVIFSHLD 190
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK---DFI 340
GP YY +D V++ P + V E+IREK +E+P+ V + S+K R A+ I
Sbjct: 191 YGPMYYDEDTVTDQPMKQIVAELIREKALHALNDEIPHGIAVVIDSFKERRNARGPITDI 250
Query: 341 QVEIVVEKNSQKIILIGKVSPFL 363
I+ E++S K I+IGK L
Sbjct: 251 DATIICERDSHKGIIIGKGGEML 273
>gi|428207766|ref|YP_007092119.1| GTP-binding protein Era [Chroococcidiopsis thermalis PCC 7203]
gi|428009687|gb|AFY88250.1| GTP-binding protein Era [Chroococcidiopsis thermalis PCC 7203]
Length = 318
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 161/306 (52%), Gaps = 44/306 (14%)
Query: 67 MDLDDGDEMEFDDASSFLSLSEKPDRNMASPDDYEIEEFDYASHPNHKSGYVAVLGKPNV 126
M D D +F DA L++ + P P +KSG++ ++G+PNV
Sbjct: 1 MITSDNDSFDFSDA---LTIPQAP--------------------PGYKSGFIGIIGRPNV 37
Query: 127 GKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMM 186
GKSTL NQ++GQK++I + QTTR+R+ GI + P Q I DTPG I K H L +++
Sbjct: 38 GKSTLMNQLVGQKIAITSPVAQTTRNRLRGILTTPAAQFIFVDTPG-IHKPHHQLGEVLV 96
Query: 187 KNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNKKDLIKPG---- 242
KN + A + D ++ +VD + D + E + + + P++L LNK D
Sbjct: 97 KNAQIAIDSVDVVLFVVDGSQVAGGGDRFIIELL--TQTQTPVVLGLNKIDRRSTNTEDL 154
Query: 243 -----EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEH 297
EIAK +W +++ SA G G+E ++ I+ L GP YYP D+V++
Sbjct: 155 DRSYQEIAKSYQW--------QMLKFSALNGEGLEALQQAIVECLEPGPYYYPPDLVTDQ 206
Query: 298 PERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIG 357
PERF +GE+IRE+I + R+EVP++ + + + P I +E++SQK ILIG
Sbjct: 207 PERFIMGELIREQILLLTRDEVPHSVAITIDKVEEAPNITRVF-ATIHIERDSQKGILIG 265
Query: 358 KVSPFL 363
K L
Sbjct: 266 KGGAML 271
>gi|374373831|ref|ZP_09631491.1| GTP-binding protein Era-like-protein [Niabella soli DSM 19437]
gi|373234804|gb|EHP54597.1| GTP-binding protein Era-like-protein [Niabella soli DSM 19437]
Length = 290
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 148/244 (60%), Gaps = 6/244 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V + GKPN GKSTL N ++G+KL+IV++K QTTRHRI I + +YQ+I DTPGI
Sbjct: 2 KSGFVNIFGKPNAGKSTLLNALMGEKLAIVSSKVQTTRHRIKAILTEKDYQIIFSDTPGI 61
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
IE + + L MM++V+SA +AD ++L+D E D++ K ++P +LVL
Sbjct: 62 IEPR-YKLHEKMMQSVKSALEDADVALLLMDVNDNWEENDQLF----SGLKLRVPGVLVL 116
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +I + + ++ +++ +SA G D I+ LP G +Y D
Sbjct: 117 NKIDKAPPTKIEEAIAYFTNKPYAKKIVAISAIAGVNYTDFLKPIVALLPEGAPFYDTDE 176
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+S+ P +FFV E+IREKI+ ++E+PY V + +K + T I +I+V + +QK+
Sbjct: 177 ISDLPTKFFVSELIREKIYELAQDEIPYHTAVLIREFKEKQTLVKII-ADIIVHRETQKM 235
Query: 354 ILIG 357
ILIG
Sbjct: 236 ILIG 239
>gi|260435524|ref|ZP_05789494.1| GTP-binding protein Era [Synechococcus sp. WH 8109]
gi|260413398|gb|EEX06694.1| GTP-binding protein Era [Synechococcus sp. WH 8109]
Length = 311
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 150/259 (57%), Gaps = 10/259 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+++SG++A++G+PNVGKSTL NQ++G+K++I + QTTR+R+ + + QM+L DTP
Sbjct: 9 DYRSGFIALIGRPNVGKSTLVNQLVGEKVAITSPVAQTTRNRLRAVLTMEVAQMVLVDTP 68
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G I K H+L ++K+ RSA D +V+L++ C+ P R D + + + LP+L+
Sbjct: 69 G-IHKPHHLLGERLVKSARSAIGEVDLVVLLLEGCERPGRGDAFIVNLL--QQQSLPVLV 125
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LNK D + ++ E Y V SA G G ++ + +LPLGP Y
Sbjct: 126 ALNKWDKLPEERRSEAEEAYAALLQETNWPVYRCSALSGDGCAELTTAMAAQLPLGPQLY 185
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV-----VSYKTRPTAKDFIQVEI 344
P ++VS+ PER +GE+IRE++ + R EVP++ V + + K + + + +
Sbjct: 186 PPEMVSDQPERVLLGELIREQVLLHTREEVPHSVAVTIDRVEELPAKGKGAGRTAVLATV 245
Query: 345 VVEKNSQKIILIGKVSPFL 363
+VE+ SQK ILIGK L
Sbjct: 246 LVERKSQKGILIGKGGAML 264
>gi|292669776|ref|ZP_06603202.1| GTP-binding protein Era [Selenomonas noxia ATCC 43541]
gi|422343265|ref|ZP_16424193.1| GTP-binding protein Era [Selenomonas noxia F0398]
gi|292648573|gb|EFF66545.1| GTP-binding protein Era [Selenomonas noxia ATCC 43541]
gi|355378572|gb|EHG25752.1| GTP-binding protein Era [Selenomonas noxia F0398]
Length = 297
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 150/254 (59%), Gaps = 9/254 (3%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+ AV+G+PNVGKSTL N +IGQK++I+++KPQTTR RIL I + + Q+I DTPG
Sbjct: 4 HKSGFAAVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTEEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSA--GINADCIVVLVDACKAP-ERIDEILEEGVGDHKDKLPI 229
+ + K H L S M K A G++ VV V P ER IL++ ++P+
Sbjct: 64 VHKPK-HKLGSYMAKAAEGALHGVDVIVFVVDVTEKMGPGERY--ILKQLA---SVRVPV 117
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
LL +NK D I E + Y K + ++P+SA+ G ++ + I LP GP YY
Sbjct: 118 LLAVNKVDCIPRAESLPVIANYAKAYEFAGIVPISAREGENLDGLLAEIKKYLPEGPQYY 177
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P+D+V++ PER + E++REK+ R+E+P+A V++ TR +I+ I VE+
Sbjct: 178 PEDMVTDQPERLIIAELVREKVLELTRDEIPHAVAVDIEEMTTREKGDVYIRAVIYVERE 237
Query: 350 SQKIILIGKVSPFL 363
SQK I+IG L
Sbjct: 238 SQKGIVIGAKGALL 251
>gi|227821404|ref|YP_002825374.1| GTP-binding protein Era [Sinorhizobium fredii NGR234]
gi|227340403|gb|ACP24621.1| GTP-binding protein [Sinorhizobium fredii NGR234]
Length = 309
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 140/251 (55%), Gaps = 3/251 (1%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A H +SG+VA++G N GKSTL N ++G K+SIV++K QTTR I GI Q++
Sbjct: 10 AGHTATRSGFVALIGATNAGKSTLVNHLVGAKVSIVSHKVQTTRAIIRGIAIHDNAQIVF 69
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKL 227
DTPGI + + LD M+ +AD IV+L+D+ + E + E + D
Sbjct: 70 MDTPGIFKPR-RRLDRAMVTTAWGGAKDADQIVLLIDSERGLRGDAEAILEALKDVPQ-- 126
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P +LVLNK D ++P ++ K + + +SA G G +D+ D++ T LP GP
Sbjct: 127 PKILVLNKIDRVRPEDLLKLAAAANEVVSFERTFMISALNGSGCKDLMDYLATALPEGPW 186
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP+D +S+ P R EI REK+F++ E+PYA V ++ R I+ I VE
Sbjct: 187 YYPEDQISDLPMRQLAAEITREKLFLRLHQELPYASHVETEKWEERKDGSVRIEQVIYVE 246
Query: 348 KNSQKIILIGK 358
++SQK I +GK
Sbjct: 247 RDSQKKIALGK 257
>gi|15674592|ref|NP_268766.1| GTP-binding protein Era [Streptococcus pyogenes SF370]
gi|71910203|ref|YP_281753.1| GTP-binding protein Era [Streptococcus pyogenes MGAS5005]
gi|410680078|ref|YP_006932480.1| GTP-binding protein Era [Streptococcus pyogenes A20]
gi|81175288|sp|P0C0B9.1|ERA_STRP1 RecName: Full=GTPase Era
gi|13621702|gb|AAK33487.1| GTP-binding protein (GTPase) [Streptococcus pyogenes M1 GAS]
gi|71852985|gb|AAZ51008.1| GTP-binding protein homolog [Streptococcus pyogenes MGAS5005]
gi|395453446|dbj|BAM29785.1| GTP-binding protein [Streptococcus pyogenes M1 476]
gi|409692667|gb|AFV37527.1| GTP-binding protein Era [Streptococcus pyogenes A20]
Length = 298
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 63 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERL--KAAKIPVILVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + D EV+P+SA G+ V + + L G Y+P+D
Sbjct: 120 NKIDKVHPDQLLEQIDDFHSQMDFKEVVPISALEGNNVPTLIKLLTDNLEEGFQYFPEDQ 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E++REK+ + EVP++ V V S K T K I+ I+VE++SQK
Sbjct: 180 ITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQK 239
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 240 GIIIGKQGAML 250
>gi|325290526|ref|YP_004266707.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus
DSM 8271]
gi|324965927|gb|ADY56706.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus
DSM 8271]
Length = 305
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 143/252 (56%), Gaps = 4/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ +SG+VAV+G+PN GKSTL N ++GQK+ I++ KPQTTR+RI I + Q++ DTP
Sbjct: 10 DFRSGFVAVVGRPNAGKSTLLNTLVGQKVLIISEKPQTTRNRIQCILTEERGQIVFIDTP 69
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M+ + + D I+ +VDA DE + V + +P +L
Sbjct: 70 GIHKPK-HQLGQYMVNTAKGSLRGTDLIIYVVDASVPFGTGDEYVLNMVKE--SGIPSIL 126
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
LNK DL+ EI K+ + + D EV+P+SA G + + D I L GP YYP+
Sbjct: 127 ALNKIDLLSKEEILSKIIEFSQQADFKEVVPISALQGENTKKLTDLIFPNLLPGPMYYPE 186
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D + + PERF V E+IREK+ R EVP++ V +V A I I+VE+ SQ
Sbjct: 187 DHIIDQPERFVVAELIREKLLKLTREEVPHSAAV-IVEKMEEQKALLKISAVILVERESQ 245
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 246 KGIVIGKNGAML 257
>gi|75910714|ref|YP_325010.1| GTP-binding protein Era [Anabaena variabilis ATCC 29413]
gi|75704439|gb|ABA24115.1| Small GTP-binding protein [Anabaena variabilis ATCC 29413]
Length = 337
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 154/259 (59%), Gaps = 15/259 (5%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG++ ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q+I DT
Sbjct: 41 PEFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDT 100
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDK 226
PG I K H L +++KN + A + D ++ +VD AC A +R I ++L K
Sbjct: 101 PG-IHKPHHQLGEVLVKNAKLAIESVDVVLFVVDGTVACGAGDRFIADLLIH------SK 153
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPL 284
P++L +NK D +P + + Y++ + + SAK G + +++ ++ L
Sbjct: 154 TPVILGINKVDQ-QPSDSQNIDDSYQQLASAYQWPTVKFSAKTGAELPQLQELLVEHLEH 212
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP D+V++ PERF +GE+IRE+I + R EVP++ + + + PT + I
Sbjct: 213 GPYYYPPDLVTDQPERFIMGELIREQILLLTREEVPHSVAIAIDLVEETPTITRVL-ATI 271
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE++SQK ILIGK L
Sbjct: 272 HVERDSQKGILIGKGGSML 290
>gi|354567532|ref|ZP_08986701.1| GTP-binding protein Era-like-protein [Fischerella sp. JSC-11]
gi|353542804|gb|EHC12265.1| GTP-binding protein Era-like-protein [Fischerella sp. JSC-11]
Length = 318
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 154/262 (58%), Gaps = 21/262 (8%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P+ KSG++ ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + E Q+I DT
Sbjct: 22 PDFKSGFIGIVGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGILTTKEAQLIFVDT 81
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPER-IDEILEEGVGDHKDK 226
PG I K H L ++++N + A + D ++ +VDA C A +R I ++L
Sbjct: 82 PG-IHKPHHQLGEVLVQNAKIAIESVDVVLFVVDATTFCGAGDRYIADLLSH------SS 134
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD-----EVIPVSAKYGHGVEDIRDWILTK 281
PI+L LNK D + A L E +T + + + SAK G G+ +++ ++
Sbjct: 135 TPIILGLNKID----QQTANSLAIDESYTQLANAHQWQTVKFSAKTGTGLSELQQLLIQN 190
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+ GP YYP D+V++ PERF +GE+IRE+I + R E+P++ +++ + T +
Sbjct: 191 IEPGPYYYPPDLVTDQPERFIMGELIREQILLLTREEIPHSVAISIDKLEETTTITRVL- 249
Query: 342 VEIVVEKNSQKIILIGKVSPFL 363
I VE++SQK ILIGK L
Sbjct: 250 ATIHVERDSQKGILIGKGGSML 271
>gi|325261977|ref|ZP_08128715.1| GTP-binding protein Era [Clostridium sp. D5]
gi|324033431|gb|EGB94708.1| GTP-binding protein Era [Clostridium sp. D5]
Length = 299
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 152/253 (60%), Gaps = 6/253 (2%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N+KSG+V ++G+PNVGKSTL N +IGQK++I +NKPQTTR+RI + + E Q++ DTP
Sbjct: 4 NYKSGFVTLIGRPNVGKSTLMNYLIGQKIAITSNKPQTTRNRIQTVLTTEEGQIVFVDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGIN-ADCIVVLVDACKAPERIDEILEEGVGDHKDKLPIL 230
GI + K + + M+ NV +N D ++ LV+ ++ + E +G + K P++
Sbjct: 64 GIHKAKNKLGEYMV--NVAERTLNEVDVVLWLVEPSTFIGAGEQHIIEQLG--RVKTPVI 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D++K E+ ++ Y+K D ++PVSA+ G +++ I+ LP GP +Y
Sbjct: 120 LVINKTDMVKKEEVLTFIDAYQKAYDFAAIVPVSARNGDNTDELVKVIMQYLPCGPQFYD 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
+D +++ PER V E+IREK ++E+P+ V + S K I I+ E++S
Sbjct: 180 EDTITDQPERQIVAELIREKALHCLQDEIPHGIAVAIDSMKMEKRVM-HIDATIICERDS 238
Query: 351 QKIILIGKVSPFL 363
K I+IGK L
Sbjct: 239 HKGIIIGKQGSML 251
>gi|339624728|ref|ZP_08660517.1| GTPase [Fructobacillus fructosus KCTC 3544]
Length = 303
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 152/246 (61%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I++NK QTTR++I GI + + Q++ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSNKAQTTRNKIQGIYTTDDAQVVFIDTPG- 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + L M+K+ SA AD I +VDA K D + + + K+ PI L++
Sbjct: 66 VHKPQNSLGDYMVKSAFSALHEADAIWFVVDASKKRGAGDNFIINRLKEVKNT-PIFLLV 124
Query: 234 NKKDLIKPGEIAKKLEWY-EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+K ++ + ++ Y E + E+ P+SA G V ++ + ++ L GP Y+ D
Sbjct: 125 NKVDLLKKEDLFEVIKTYQEDAPEWTEIFPISATEGDNVPELLETVIKDLDEGPQYFDSD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IREK+ + EVP++ V + T IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVISELIREKVLQLTQQEVPHSVAVVIDKIATEADGIVHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIVIGK 250
>gi|428304647|ref|YP_007141472.1| GTP-binding protein Era-like-protein [Crinalium epipsammum PCC
9333]
gi|428246182|gb|AFZ11962.1| GTP-binding protein Era-like-protein [Crinalium epipsammum PCC
9333]
Length = 325
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 164/288 (56%), Gaps = 29/288 (10%)
Query: 91 DRNMASPDDYEIEEFDYASHP-NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQT 149
D+ +++ D+ +I F P +KSG+V ++G+PNVGKSTL NQM+GQK++I + QT
Sbjct: 5 DQEISAIDNLDISAFRIPVAPEGYKSGFVGIIGRPNVGKSTLMNQMVGQKIAITSPIAQT 64
Query: 150 TRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP 209
TR+R+ GI + P+ Q I DTPG I K H L ++++N + A + D +V +VD
Sbjct: 65 TRNRLRGILTTPQAQFIFVDTPG-IHKPQHKLGEVLVRNAKIAIDSVDVLVFVVDGA--- 120
Query: 210 ERIDEILEEGVGD-------HKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVD---- 258
++ G GD + K P++L LNK D +P + ++ + +T++
Sbjct: 121 ------VDAGGGDRFIADLLNNTKTPVILGLNKIDQ-EPVKNQQREYIDQTYTELAKPHN 173
Query: 259 -EVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRN 317
++ SA G G+E + ++ L GP YYP D+V++ PERF +GE+IRE+I + R
Sbjct: 174 WQIAKFSALTGEGIETLEQVLIDHLEPGPYYYPPDLVTDQPERFIMGELIREQILLLTRE 233
Query: 318 EVPY--ACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKVSPFL 363
EVP+ A ++VV + T + I VE++SQK ILIGK L
Sbjct: 234 EVPHSVAVTIDVVEEDVKITR---VLATIYVERDSQKGILIGKGGAML 278
>gi|15643610|ref|NP_228656.1| GTP-binding protein Era [Thermotoga maritima MSB8]
gi|403252588|ref|ZP_10918897.1| GTPase Era [Thermotoga sp. EMP]
gi|8134443|sp|Q9WZV1.1|ERA_THEMA RecName: Full=GTPase Era
gi|4981380|gb|AAD35929.1|AE001751_9 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|402812078|gb|EJX26558.1| GTPase Era [Thermotoga sp. EMP]
Length = 300
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 147/251 (58%), Gaps = 14/251 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+ GKPNVGKST N ++G+K+ IV++KPQTTR+RI I + + Q+I DTPGI
Sbjct: 4 KSGFVALAGKPNVGKSTFINAVMGRKVVIVSDKPQTTRNRINCIYTDKDSQIIFVDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K +H L M+K A D ++ ++DA + DE + + V D K ++ +
Sbjct: 64 -HKPLHRLGEYMVKAAVQALKGVDLVLFMLDAADGFTKTDEHVAKIVNDSGTK--TIIAV 120
Query: 234 NKKDLIKP------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
NK D+ GE+AK + +V V +SA G GV ++ + I +LP GP
Sbjct: 121 NKIDVAGEEKAKAVGELAKSM-----VENVVSVHYISALKGEGVFEVLEKIKEELPEGPQ 175
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP+D+V++ P F EIIREKIF R EVP++ V + K RP +I+ I VE
Sbjct: 176 YYPEDMVTDRPLSFMAAEIIREKIFHLTRQEVPHSTAVVIEEIKDRPNGVLYIRANIYVE 235
Query: 348 KNSQKIILIGK 358
++SQK ILIGK
Sbjct: 236 RDSQKGILIGK 246
>gi|238853405|ref|ZP_04643784.1| GTP-binding protein Era [Lactobacillus gasseri 202-4]
gi|238833977|gb|EEQ26235.1| GTP-binding protein Era [Lactobacillus gasseri 202-4]
Length = 303
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 152/255 (59%), Gaps = 10/255 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG+VA++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++ DTP
Sbjct: 7 DYKSGFVALIGRPNVGKSTLLNFLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIVFIDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLP 228
GI + K + LD M K+ SA D ++ +V+ A K + I E+L+ K K P
Sbjct: 67 GIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------KIKKP 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ ++ Y+ D E++P+SA G+ V ++ I LP GP +
Sbjct: 120 VFLVINKIDKVHPDKLLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKNLPEGPQF 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y D +++ PE F V E+IRE++ EVP+A V V + K I+ I VE+
Sbjct: 180 YDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQIEATIYVER 239
Query: 349 NSQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 PGQKGIIIGKKGQML 254
>gi|365876585|ref|ZP_09416104.1| GTPase Era [Elizabethkingia anophelis Ag1]
gi|442587084|ref|ZP_21005904.1| GTPase Era [Elizabethkingia anophelis R26]
gi|365755583|gb|EHM97503.1| GTPase Era [Elizabethkingia anophelis Ag1]
gi|442563139|gb|ELR80354.1| GTPase Era [Elizabethkingia anophelis R26]
Length = 291
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 150/246 (60%), Gaps = 7/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++GKPN GKSTL NQ++G+KL+IVT K QTTRHRI GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNQLMGEKLAIVTQKAQTTRHRIFGIYNEDDVQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ K + L MM+ V+ + +AD + +VD + + ++E+ +K +P+L++
Sbjct: 62 VLDPK-YGLQEKMMEFVKESLQDADVFLFIVDITDKAQPSEFLIEKL---NKIPVPVLIL 117
Query: 233 LNKKDLIKPGEIAKKLE-WYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
+NK D + + + W+E+ E++P+SA + E I + + LP PAYY K
Sbjct: 118 INKVDKADQKVLEETVALWHERIPKA-EILPISALNAYNTEYILPKLKSLLPESPAYYDK 176
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D ++ ERFFV E IREKI + Y E+PY+ +V +K + FI I VE+ +Q
Sbjct: 177 DQFTDKSERFFVNETIREKILLNYEKEIPYSVEVVTELFKDKGEMI-FIDSIIYVERETQ 235
Query: 352 KIILIG 357
K ILIG
Sbjct: 236 KGILIG 241
>gi|254469267|ref|ZP_05082672.1| GTP-binding protein Era [Pseudovibrio sp. JE062]
gi|374331953|ref|YP_005082137.1| GTP-binding protein Era [Pseudovibrio sp. FO-BEG1]
gi|211961102|gb|EEA96297.1| GTP-binding protein Era [Pseudovibrio sp. JE062]
gi|359344741|gb|AEV38115.1| GTP-binding protein Era [Pseudovibrio sp. FO-BEG1]
Length = 320
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 149/263 (56%), Gaps = 14/263 (5%)
Query: 103 EEFDYASHP---NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICS 159
E F++ P N ++G+VA++G PN GKSTL NQ++G K+SIVT+K QTTR + G+
Sbjct: 13 EGFNFGLAPVNENSRAGFVALIGAPNAGKSTLLNQLVGTKVSIVTHKVQTTRAIVRGVAI 72
Query: 160 GPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEE 218
+ Q+I DTPGI K LD M+ +AD + VL+DA K E ++ IL E
Sbjct: 73 EDDSQVIFVDTPGIFRPK-RRLDRAMVDTAWGGAKDADVVAVLIDAKKGINEAVERILNE 131
Query: 219 GVGDHKDKLPILLVLNKKDLIKPG---EIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIR 275
+H KLP +L+LNK D+ K E+A K Y KF D+ VSA G G +DI
Sbjct: 132 L--EHI-KLPKVLILNKIDITKREQLLELAAKANEYTKF---DQTFMVSAINGSGTKDIL 185
Query: 276 DWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPT 335
+ ++P GP YP+D S+ P R EI REK++++ E+PY V ++ +
Sbjct: 186 KYFSEQMPKGPWLYPEDQASDIPLRMLAAEITREKLYLRLHEELPYISTVETDKWEDKKD 245
Query: 336 AKDFIQVEIVVEKNSQKIILIGK 358
I+ I VE++SQK I++GK
Sbjct: 246 GSIRIEQTIFVERDSQKSIVLGK 268
>gi|418964813|ref|ZP_13516601.1| GTP-binding protein Era [Streptococcus constellatus subsp.
constellatus SK53]
gi|383344214|gb|EID22383.1| GTP-binding protein Era [Streptococcus constellatus subsp.
constellatus SK53]
Length = 299
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDMEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + R D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGRGDDMIMERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + E++P+SA G+ V + + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMEFKEIVPISALQGNNVPRLMELLKENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGALL 251
>gi|377809673|ref|YP_005004894.1| GTP-binding protein Era [Pediococcus claussenii ATCC BAA-344]
gi|361056414|gb|AEV95218.1| GTP-binding protein Era [Pediococcus claussenii ATCC BAA-344]
Length = 302
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 147/238 (61%), Gaps = 2/238 (0%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+VA++G+PNVGKST N ++GQK++I+++ PQTTR++I G+ + + Q+I DTPGI
Sbjct: 7 RSGFVAIVGRPNVGKSTFLNYVVGQKVAIMSDVPQTTRNKIQGVYTNDQEQIIFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+++ S+ D ++ +V+A + D + E + DK PI LV+
Sbjct: 67 -HKAHNKLGDFMVQSAMSSLNEVDAVMFMVNADQRRGAGDNFIIERLKKITDK-PIYLVI 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DL+ P ++ + +E Y+ E+ P+SA G+ + ++ + + +LP GP YYP D
Sbjct: 125 NKIDLVHPDDLFEIVESYKDALSWKEIFPISALQGNNINELINSLGQELPEGPQYYPDDQ 184
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
V++HPERF V E+IREK+ R EVP++ V + S K IQ I+V++ +Q
Sbjct: 185 VTDHPERFIVSELIREKVLQLTRQEVPHSVAVLIDSMKRDDRDMVNIQATIIVDRPTQ 242
>gi|255525312|ref|ZP_05392252.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
gi|296188181|ref|ZP_06856573.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
gi|255510984|gb|EET87284.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
gi|296047307|gb|EFG86749.1| GTP-binding protein Era [Clostridium carboxidivorans P7]
Length = 293
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 147/257 (57%), Gaps = 17/257 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+ KPQTTR+ I I + ++Q++ DTPGI
Sbjct: 3 KSGFITIIGRPNVGKSTLLNSIMGEKLSIVSCKPQTTRNNIQTILTEKDFQLVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKDK 226
+ K H L M+K + + D I+ L + PE DEI G GD +
Sbjct: 63 HKPK-HKLGEFMVKIAQDSIKEVDLILFLTN----PE--DEI---GKGDMYILEQLKECN 112
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
+P+ LVLNK D +AK L+ Y K E+IP+SA G V+++++ ++ + GP
Sbjct: 113 VPVFLVLNKIDENTQERVAKTLDNYSKVFSFAEIIPISALKGKNVDELKELMVKYMHEGP 172
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YYP+D++++ ERF V E IREK EVP+ V ++S K I I+
Sbjct: 173 KYYPEDMITDQQERFVVAETIREKALRLLSQEVPHGTAVEIISMKKDEKGMYHIDATILC 232
Query: 347 EKNSQKIILIGKVSPFL 363
EK+S K I+IGK L
Sbjct: 233 EKDSHKGIIIGKNGSML 249
>gi|254503598|ref|ZP_05115749.1| GTP-binding protein Era [Labrenzia alexandrii DFL-11]
gi|222439669|gb|EEE46348.1| GTP-binding protein Era [Labrenzia alexandrii DFL-11]
Length = 337
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 153/287 (53%), Gaps = 23/287 (8%)
Query: 91 DRNMASPDDYEIEE-----------FDY-------ASHPNHKSGYVAVLGKPNVGKSTLA 132
D PDD+E ++ FD A + K+G+VA++G PN GKSTL
Sbjct: 3 DETSNEPDDFETDDDGTEFVAPKGRFDIPLPDPLGAMPSDTKAGFVALIGAPNAGKSTLI 62
Query: 133 NQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIEKKIHMLDSMMMKNVRSA 192
NQ++G K+SIVT+K QTTR + G+ Q++ DTPGI + K LD M+
Sbjct: 63 NQLVGTKVSIVTHKVQTTRSIVRGVAMHGTAQLVFIDTPGIFKPK-RRLDRAMVDTAWGG 121
Query: 193 GINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLVLNKKDLIKPGEIAKKLEWY 251
+AD I +L+DA K E +++IL+ G P +L+LNK D+ ++ K +
Sbjct: 122 ARDADVIALLIDARKGIDEEVEQILKRLKGQSA---PKVLILNKTDVANREKLLKLAQKA 178
Query: 252 EKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIVSEHPERFFVGEIIREKI 311
++ + +E VSA G G + I D+ +K+P GP YP+D S+ P R EI REK+
Sbjct: 179 NEYLEFEETFMVSALTGDGTQQILDYFASKMPDGPWLYPEDQPSDLPLRILAAEITREKL 238
Query: 312 FMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGK 358
F + E+PY V ++T+ I+ I VE++SQK I++GK
Sbjct: 239 FERLHQELPYISTVETERWETKKDGSARIEQTIYVERDSQKSIVLGK 285
>gi|262273709|ref|ZP_06051522.1| GTP-binding protein Era [Grimontia hollisae CIP 101886]
gi|262222124|gb|EEY73436.1| GTP-binding protein Era [Grimontia hollisae CIP 101886]
Length = 304
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 116 GYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGIIE 175
G++A++G+PNVGKSTL N+++GQKLSI + KPQTTRHRI+G+ + YQ + DTPG+
Sbjct: 11 GFIAIVGRPNVGKSTLLNRLVGQKLSITSRKPQTTRHRIMGVDTRDGYQAVYVDTPGLHI 70
Query: 176 KKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVLNK 235
++ ++ +M + S+ + + ++ LVD + + +L + K +LP +L++NK
Sbjct: 71 EEKRTINRLMNRAASSSLTDVELVLFLVDGTHWTQDDEMVLNKL---KKAQLPTVLLVNK 127
Query: 236 KDLIK-PGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDIV 294
D +K GE+ L+ + D +V+PVSAK+G ++ + + LP G Y+P++ V
Sbjct: 128 VDNVKEKGELFPHLQEISQKMDFIDVVPVSAKHGTNIDVVEKLVRKHLPEGEWYFPEEYV 187
Query: 295 SEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQKI 353
++ +RF EIIREK+ +E+PY+ V + + P F I I+VE+N QK
Sbjct: 188 TDRSQRFMASEIIREKLMRFTGDELPYSVTVEIERFDYNPETDGFEINGLILVERNGQKR 247
Query: 354 ILIGK 358
++IGK
Sbjct: 248 MVIGK 252
>gi|357059985|ref|ZP_09120759.1| GTP-binding protein Era [Alloprevotella rava F0323]
gi|355376875|gb|EHG24115.1| GTP-binding protein Era [Alloprevotella rava F0323]
Length = 292
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 149/245 (60%), Gaps = 7/245 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G PNVGKS+L N + G+++SI T K QTTRHRI+GI + + Q++ DTPG+
Sbjct: 2 KSGFVNLVGNPNVGKSSLMNLLTGERISIATFKAQTTRHRIMGIVNTDDAQIVFSDTPGV 61
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
++ M ++M+ + SA +AD ++ + D ER D+ + + +P+LL++
Sbjct: 62 LKPNYKMQEAMLAFS-ESALQDADVLLYVTDVV---ERADKNADFLAKVREMSVPVLLLI 117
Query: 234 NKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK D ++ + + EW+E+ E+ PVSAK V+ + I LP P Y+ +D
Sbjct: 118 NKIDTSNQQDLERLVNEWHEQLPKA-EIFPVSAKAKFNVDTVLRRIKELLPEAPPYFERD 176
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PYAC+V+V +K + + I I VE++SQK
Sbjct: 177 QWTDKPARFFVTEIIREKILLYYNKEIPYACEVSVERFKEQEKSIH-INAIIYVERDSQK 235
Query: 353 IILIG 357
I+IG
Sbjct: 236 GIIIG 240
>gi|418044983|ref|ZP_12683079.1| GTP-binding protein Era-like-protein [Thermotoga maritima MSB8]
gi|351678065|gb|EHA61212.1| GTP-binding protein Era-like-protein [Thermotoga maritima MSB8]
Length = 301
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 147/251 (58%), Gaps = 14/251 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+ GKPNVGKST N ++G+K+ IV++KPQTTR+RI I + + Q+I DTPGI
Sbjct: 5 KSGFVALAGKPNVGKSTFINAVMGRKVVIVSDKPQTTRNRINCIYTDKDSQIIFVDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K +H L M+K A D ++ ++DA + DE + + V D K ++ +
Sbjct: 65 -HKPLHRLGEYMVKAAVQALKGVDLVLFMLDAADGFTKTDEHVAKIVNDSGTK--TIIAV 121
Query: 234 NKKDLIKP------GEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
NK D+ GE+AK + +V V +SA G GV ++ + I +LP GP
Sbjct: 122 NKIDVAGEEKAKAVGELAKSM-----VENVVSVHYISALKGEGVFEVLEKIKEELPEGPQ 176
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP+D+V++ P F EIIREKIF R EVP++ V + K RP +I+ I VE
Sbjct: 177 YYPEDMVTDRPLSFMAAEIIREKIFHLTRQEVPHSTAVVIEEIKDRPNGVLYIRANIYVE 236
Query: 348 KNSQKIILIGK 358
++SQK ILIGK
Sbjct: 237 RDSQKGILIGK 247
>gi|444335360|ref|YP_007391729.1| putative GTP-binding protein [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
gi|444299739|gb|AGD97976.1| putative GTP-binding protein [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
Length = 305
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 149/254 (58%), Gaps = 12/254 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+ LSI+T+KPQTTRHRILGI Q+I DTPG
Sbjct: 8 HKSGFVNIIGFPNVGKSTLMNSLVGEDLSIITHKPQTTRHRILGILDKYNAQIIFSDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK--APERIDEILEEGVGDHKDKLPIL 230
+ K + +MMK + + +AD ++ + K ++ IL + + K+ P L
Sbjct: 68 FMIKTAFFMQKIMMKYIERSLEDADIVLFTTEIGKFFISDKYFPIL-NSLKNIKNNKPFL 126
Query: 231 LVLNKKDLI----KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
+++NK D I + + + ++ + E++P+SA + + D IL L P
Sbjct: 127 ILINKIDKIGIECDEKILYETINYWHRIFPHSEILPISALKNINQDLLMDKILGLLSEHP 186
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EI 344
YYPK +S+ +RFFV EIIREKIF+ Y+ E+PY+ ++ ++K F+ + I
Sbjct: 187 PYYPKGFLSDRSKRFFVNEIIREKIFLLYKKEIPYSVEIFTETFKENEM---FLHIFSSI 243
Query: 345 VVEKNSQKIILIGK 358
VEKNSQK ILIGK
Sbjct: 244 YVEKNSQKGILIGK 257
>gi|42519246|ref|NP_965176.1| GTP-binding protein Era [Lactobacillus johnsonii NCC 533]
gi|385825800|ref|YP_005862142.1| GTP-binding protein era protein [Lactobacillus johnsonii DPC 6026]
gi|417837448|ref|ZP_12483686.1| GTP-binding protein Era [Lactobacillus johnsonii pf01]
gi|41583534|gb|AAS09142.1| GTP-binding protein era-like protein [Lactobacillus johnsonii NCC
533]
gi|329667244|gb|AEB93192.1| GTP-binding protein era protein [Lactobacillus johnsonii DPC 6026]
gi|338760991|gb|EGP12260.1| GTP-binding protein Era [Lactobacillus johnsonii pf01]
Length = 303
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 151/255 (59%), Gaps = 10/255 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++ DTP
Sbjct: 7 DFKSGFVALIGRPNVGKSTLLNYLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIVFIDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLP 228
GI + K + LD M K+ SA D ++ +V+ A K + I E+L+ K K P
Sbjct: 67 GIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------KIKKP 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P E+ ++ Y+ D E++P+SA G+ V ++ I LP GP +
Sbjct: 120 VFLVINKIDKVHPDELLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLPEGPQF 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y D +++ PE F V E+IRE++ EVP+A V V + K ++ I VE+
Sbjct: 180 YDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQVEATIYVER 239
Query: 349 NSQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 PGQKGIIIGKKGQML 254
>gi|261749630|ref|YP_003257316.1| cell growth GTP-binding protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497723|gb|ACX84173.1| putative GTP-binding protein (cell growth-related) [Blattabacterium
sp. (Periplaneta americana) str. BPLAN]
Length = 305
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 149/254 (58%), Gaps = 12/254 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V ++G PNVGKSTL N ++G+ LSI+T+KPQTTRHRILGI Q+I DTPG
Sbjct: 8 HKSGFVNIIGFPNVGKSTLMNSLVGEDLSIITHKPQTTRHRILGIVDKYNAQIIFSDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK--APERIDEILEEGVGDHKDKLPIL 230
+ K + +MMK + + +AD ++ + K ++ IL + + K+ P L
Sbjct: 68 FMIKTAFFMQRIMMKYIERSLEDADIVLFTTEIGKFSISDKYFSIL-NSLKNIKNNKPFL 126
Query: 231 LVLNKKDLI----KPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
+++NK D I + + + ++ + E++P+SA + + D IL L P
Sbjct: 127 ILINKIDKIGIECDEKILYETINYWHRIFPHSEILPISALKNINQDLLMDKILGLLSEHP 186
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EI 344
YYPK +S+ +RFFV EIIREKIF+ Y+ E+PY+ ++ ++K F+ + I
Sbjct: 187 PYYPKGFLSDKSKRFFVNEIIREKIFLLYKKEIPYSVEIFTETFKENEM---FLHIFSSI 243
Query: 345 VVEKNSQKIILIGK 358
VE+NSQK ILIGK
Sbjct: 244 YVERNSQKGILIGK 257
>gi|227890109|ref|ZP_04007914.1| GTP-binding protein Era [Lactobacillus johnsonii ATCC 33200]
gi|268319372|ref|YP_003293028.1| GTP-binding protein [Lactobacillus johnsonii FI9785]
gi|227849553|gb|EEJ59639.1| GTP-binding protein Era [Lactobacillus johnsonii ATCC 33200]
gi|262397747|emb|CAX66761.1| GTP-binding protein [Lactobacillus johnsonii FI9785]
Length = 303
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 151/255 (59%), Gaps = 10/255 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+ KSG+VA++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++ DTP
Sbjct: 7 DFKSGFVALIGRPNVGKSTLLNYLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIVFIDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLP 228
GI + K + LD M K+ SA D ++ +V+ A K + I E+L+ K K P
Sbjct: 67 GIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------KIKKP 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P E+ ++ Y+ D E++P+SA G+ V ++ I LP GP +
Sbjct: 120 VFLVINKIDKVHPDELLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLPEGPQF 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y D +++ PE F V E+IRE++ EVP+A V V + K ++ I VE+
Sbjct: 180 YDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQVEATIYVER 239
Query: 349 NSQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 PGQKGIIIGKKGQML 254
>gi|293376339|ref|ZP_06622576.1| GTP-binding protein Era [Turicibacter sanguinis PC909]
gi|325843413|ref|ZP_08167971.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1]
gi|292645028|gb|EFF63101.1| GTP-binding protein Era [Turicibacter sanguinis PC909]
gi|325489335|gb|EGC91709.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1]
Length = 302
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 150/257 (58%), Gaps = 6/257 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ + KSG+V+++G+PNVGKST NQ++G+K++I+++KPQTTR++I G+ + + Q I
Sbjct: 2 TEKHFKSGFVSIIGRPNVGKSTFLNQVLGKKIAIMSDKPQTTRNKIQGVITDADSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M D ++ +V+A + + D + E + + K P
Sbjct: 62 DTPGIHKPK-HELGKFMTDLAIGTLNEVDAVMFMVNATEKVGKGDRFIIEHLQNVKQ--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK DLI E+ + + + + +IP+SA G VE + I LP GP +
Sbjct: 119 VFLVINKIDLITKEELLTVIASFREEYNFAGIIPISAMTGENVETLISVIKEALPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQV--EIVV 346
YP D +++HPERF + E+IREK+ EVP++ V V+ + K+ I V IVV
Sbjct: 179 YPSDYITDHPERFIISELIREKVLHLTHEEVPHSVAV-VIDKIEKVEGKNVIDVMATIVV 237
Query: 347 EKNSQKIILIGKVSPFL 363
E+ SQK ILIGK L
Sbjct: 238 ERPSQKGILIGKGGKML 254
>gi|427732207|ref|YP_007078444.1| GTP-binding protein Era [Nostoc sp. PCC 7524]
gi|427368126|gb|AFY50847.1| GTP-binding protein Era [Nostoc sp. PCC 7524]
Length = 318
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 155/259 (59%), Gaps = 15/259 (5%)
Query: 111 PNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDT 170
P KSG++ ++G+PNVGKSTL NQ++GQK++I + QTTR+R+ GI + PE Q I DT
Sbjct: 22 PEFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQFIFVDT 81
Query: 171 PGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPER-IDEILEEGVGDHKDK 226
PG I K H L ++++N + A + D ++ +VD AC A +R I ++L +
Sbjct: 82 PG-IHKPHHQLGEILVQNAKIAIDSVDVVLFVVDGTVACGAGDRFIADLLTD------SH 134
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDE--VIPVSAKYGHGVEDIRDWILTKLPL 284
P++L +NK D +P + + Y++ + + ++ SAK G G+ ++ ++ L
Sbjct: 135 TPVILGVNKVDQ-QPTDYQSIDDSYQQLAETYQWPIVKFSAKTGTGLPQLQALLVEHLDH 193
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP YYP D++++ PERF +GE+IRE+I + R EVP++ + + + P+ + I
Sbjct: 194 GPFYYPPDLITDQPERFIMGELIREQILLLTREEVPHSVAIAIDKVEETPSITRVL-ATI 252
Query: 345 VVEKNSQKIILIGKVSPFL 363
VE++SQK ILIGK L
Sbjct: 253 HVERDSQKGILIGKGGSML 271
>gi|29349243|ref|NP_812746.1| GTP-binding protein Era [Bacteroides thetaiotaomicron VPI-5482]
gi|298384784|ref|ZP_06994343.1| GTP-binding protein Era [Bacteroides sp. 1_1_14]
gi|380693595|ref|ZP_09858454.1| GTPase Era [Bacteroides faecis MAJ27]
gi|383120154|ref|ZP_09940886.1| GTP-binding protein Era [Bacteroides sp. 1_1_6]
gi|29341151|gb|AAO78940.1| putative GTP-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837313|gb|EES65413.1| GTP-binding protein Era [Bacteroides sp. 1_1_6]
gi|298261928|gb|EFI04793.1| GTP-binding protein Era [Bacteroides sp. 1_1_14]
Length = 293
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 153/246 (62%), Gaps = 5/246 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HK+G+V ++G PNVGKSTL N ++G+++SI T K QTTRHRI+GI + + Q++ DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
+++ + +SM+ + SA +AD ++ + D + P++ +E + + + +P+LL+
Sbjct: 62 VLKPNYKLQESMLNFST-SALTDADVLLYVTDVVETPDKNNEFMGKV---RQMTVPVLLL 117
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL ++ K +E +++ E+IP+SA V+ + I LP P Y+ KD
Sbjct: 118 INKIDLTDQEKLIKLVEEWKELLPQAEIIPISAASKFNVDYVMKRIQELLPDSPPYFGKD 177
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
++ P RFFV EIIREKI + Y E+PY+ +V V +K K I+ I VE++SQK
Sbjct: 178 QWTDKPARFFVNEIIREKILLYYDKEIPYSVEVVVEEFKEE-AKKIHIRAVIYVERDSQK 236
Query: 353 IILIGK 358
I+IGK
Sbjct: 237 GIIIGK 242
>gi|423070294|ref|ZP_17059070.1| GTP-binding protein era [Streptococcus intermedius F0413]
gi|355366615|gb|EHG14333.1| GTP-binding protein era [Streptococcus intermedius F0413]
Length = 299
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++K QTTR++I+GI + Q++ DTPGI
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDMEQIVFIDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K + D M+++ S + ++ +V A + + D+++ E + K+P++LV+
Sbjct: 64 HKPKTALGD-FMVESAYSTLREVETVLFMVPADEKRGKGDDMIMERL--KAAKIPVILVI 120
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + P ++ ++++ + + E++P+SA G+ V + + + L G Y+P+D
Sbjct: 121 NKIDKVHPDQLLEQIDDFRTQMEFKEIVPISALQGNNVSRLMELLTENLEEGFQYFPEDQ 180
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKT-RPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI EVP++ V + S K T K I+ I+VE++SQK
Sbjct: 181 ITDHPERFLVSEMIREKILKLTEQEVPHSVAVVIESMKRDEETDKVHIRATIMVERDSQK 240
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 241 GIIIGKQGAML 251
>gi|78212431|ref|YP_381210.1| GTP-binding protein Era [Synechococcus sp. CC9605]
gi|78196890|gb|ABB34655.1| GTP-binding protein Era [Synechococcus sp. CC9605]
Length = 311
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 152/260 (58%), Gaps = 12/260 (4%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
+++SG++A++G+PNVGKSTL NQ++G+K++I + QTTR+R+ I + QM+L DTP
Sbjct: 9 DYRSGFIALIGRPNVGKSTLVNQLVGEKVAITSPVAQTTRNRLRAILTTEVAQMVLVDTP 68
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
G I K H+L ++K+ RSA D +V+L++ C+ P R D + + + LP+L+
Sbjct: 69 G-IHKPHHLLGERLVKSARSAIGEVDLVVLLLEGCERPGRGDAFIVNLL--QQQSLPVLV 125
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPV---SAKYGHGVEDIRDWILTKLPLGPAY 288
LNK D + A+ E Y + PV SA G G D+ + +LPLGP
Sbjct: 126 ALNKWDKLAEEHRAEAEEAYAALLQ-ETNWPVHRCSALSGDGCADLTAAMAAQLPLGPQL 184
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNV-----VSYKTRPTAKDFIQVE 343
YP ++VS+ PER +GE+IRE++ + R EVP++ V + + K + + +
Sbjct: 185 YPPEMVSDQPERVLLGELIREQVLLHTREEVPHSVAVTIDRVEELPAKGKGAGRTAVLAT 244
Query: 344 IVVEKNSQKIILIGKVSPFL 363
++VE+ SQK ILIGK L
Sbjct: 245 VLVERKSQKGILIGKGGAML 264
>gi|299144155|ref|ZP_07037235.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518640|gb|EFI42379.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 296
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 148/252 (58%), Gaps = 4/252 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++GQK+S ++NK QTTR++I I + + Q+I DTPGI
Sbjct: 3 KSGFVTIIGRPNVGKSTLLNCIVGQKISAISNKAQTTRNKITFIYTDEKMQVIFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K S D I +VD K ++D + + + + K PI+L++
Sbjct: 63 QMPK-NKLGDYMLKVSESTLSEVDVITYIVDCSKKIGKLDNYIIKELKEKNLKTPIVLLV 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + E+ + ++ Y+ E+IP+SA GVE + +P+GP YYP+D+
Sbjct: 122 NKIDEVAKEELFEIIKMYDDIGIFKEIIPISALKNDGVESYLKTLAKYIPIGPMYYPEDM 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVVEKNSQ 351
V++HPE+F VGEIIREK E+P+ V++ + R K+ +E I +E+ S
Sbjct: 182 VTDHPEKFIVGEIIREKALRFLDEEIPHGIAVSIEKMRERK-EKEITDIEAVIYIERESH 240
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 241 KKIVIGKNGQML 252
>gi|427414153|ref|ZP_18904343.1| GTP-binding protein Era [Veillonella ratti ACS-216-V-Col6b]
gi|425714529|gb|EKU77532.1| GTP-binding protein Era [Veillonella ratti ACS-216-V-Col6b]
Length = 298
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 148/250 (59%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VAV+G+PNVGKSTL N +IG K+ IV++K QTTR+RI+ + + Q++ DTPGI
Sbjct: 8 KSGFVAVVGRPNVGKSTLINALIGDKIVIVSDKAQTTRNRIVCVYMDEKKQIVFMDTPGI 67
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + + ++ LV + D + E + + +P+ LV+
Sbjct: 68 HKPK-HKLGEFMVKAAVDSLKEVEAVLFLVAGNEKRGPGDNFIIEQLKNVD--VPVFLVI 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + +I + + Y+ + +IP+SA + ++ D + LP GP Y+P+D+
Sbjct: 125 NKIDTLAKEQILETIVEYQNLYPFEGIIPISALEKDNIHEVLDVLEQVLPEGPQYFPEDM 184
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PER + +I+REKI ++ R E+P+A V+V K RP +I+ I E++SQK
Sbjct: 185 ITDQPERLIIADIVREKILLKTREEIPHAIAVDVDEMKQRPDGTTYIRATIYCERDSQKG 244
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 245 IIIGKKGNML 254
>gi|238917282|ref|YP_002930799.1| GTP-binding protein Era [Eubacterium eligens ATCC 27750]
gi|238872642|gb|ACR72352.1| GTP-binding protein Era [Eubacterium eligens ATCC 27750]
Length = 322
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 147/263 (55%), Gaps = 14/263 (5%)
Query: 108 ASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMIL 167
A + K+G+V +G+PNVGKSTL NQ+IGQK++I +NKPQTTR+RI + + Q++
Sbjct: 18 AENTRTKTGFVTFIGRPNVGKSTLMNQIIGQKIAITSNKPQTTRNRIQTVYTDERGQIVF 77
Query: 168 YDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACK----APERIDEILEEGVGDH 223
DTPGI + K + L M+ D I LV+ A E I E L+E
Sbjct: 78 VDTPGIHKAK-NKLGEYMVGAAEKTISEVDLICWLVEPTTHLGAAEEHIVEKLKEC---- 132
Query: 224 KDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLP 283
K PI+LV+NK D IK EI ++ Y K D +++PV A+ G+ V+D+ D I L
Sbjct: 133 --KTPIVLVINKTDTIKKEEILPVIDCYRKELDFVDIVPVCARNGNNVDDLLDVIFLHLD 190
Query: 284 LGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAK---DFI 340
GP YY +D V++ P + V E+IREK +E+P+ V + S+K R A+ I
Sbjct: 191 YGPMYYDEDTVTDQPMKQIVAELIREKALHALNDEIPHGIAVVIDSFKERRNARGPITDI 250
Query: 341 QVEIVVEKNSQKIILIGKVSPFL 363
I+ E++S K I+IGK L
Sbjct: 251 DATIICERDSHKGIIIGKGGEML 273
>gi|153953550|ref|YP_001394315.1| GTP-binding protein Era [Clostridium kluyveri DSM 555]
gi|219854172|ref|YP_002471294.1| hypothetical protein CKR_0829 [Clostridium kluyveri NBRC 12016]
gi|189037262|sp|A5N6N6.1|ERA_CLOK5 RecName: Full=GTPase Era
gi|254783294|sp|B9E055.1|ERA_CLOK1 RecName: Full=GTPase Era
gi|146346431|gb|EDK32967.1| Predicted GTP-binding protein [Clostridium kluyveri DSM 555]
gi|219567896|dbj|BAH05880.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 293
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 151/257 (58%), Gaps = 17/257 (6%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+ KPQTTR+ I I + ++Q+I DTPGI
Sbjct: 3 KSGFITIIGRPNVGKSTLLNSIMGEKLSIVSCKPQTTRNSIQTILTRDDFQLIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH-------KDK 226
+ K H L + M+K S+ + D I+ L+ P+ +E G GD K+
Sbjct: 63 HKPK-HKLGNYMVKVAESSVKDVDLILFLI----TPD-----VEVGKGDRYILEQLKKEN 112
Query: 227 LPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGP 286
+P+ LV+NK D ++A+ L+ Y + D E+IP+SA V+++ + ++ +P GP
Sbjct: 113 IPVFLVVNKIDENPQEKVAQTLKNYSEIFDFAEIIPISALKQKNVKELVELMVKYMPEGP 172
Query: 287 AYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVV 346
YYP D++++ E+F V EIIREK EVP+ V+++S K I+ I+
Sbjct: 173 KYYPDDMITDKQEKFVVSEIIREKALRLLSKEVPHGIAVDILSMKKNSKGLYNIEATILC 232
Query: 347 EKNSQKIILIGKVSPFL 363
EK S K I+IGK L
Sbjct: 233 EKESHKGIIIGKKGAML 249
>gi|311110602|ref|ZP_07711999.1| GTP-binding protein Era [Lactobacillus gasseri MV-22]
gi|311065756|gb|EFQ46096.1| GTP-binding protein Era [Lactobacillus gasseri MV-22]
Length = 302
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 152/255 (59%), Gaps = 10/255 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG+VA++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++ DTP
Sbjct: 6 DYKSGFVALIGRPNVGKSTLLNFLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIVFIDTP 65
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLP 228
GI + K + LD M K+ SA D ++ +V+ A K + I E+L+ K K P
Sbjct: 66 GIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------KIKKP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ ++ Y+ D E++P+SA G+ V ++ I LP GP +
Sbjct: 119 VFLVINKIDKVHPDKLLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y D +++ PE F V E+IRE++ EVP+A V V + K I+ I VE+
Sbjct: 179 YDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQIEATIYVER 238
Query: 349 NSQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 239 PGQKGIIIGKKGQML 253
>gi|154247805|ref|YP_001418763.1| GTP-binding protein Era [Xanthobacter autotrophicus Py2]
gi|154161890|gb|ABS69106.1| GTP-binding protein Era [Xanthobacter autotrophicus Py2]
Length = 385
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 138/246 (56%), Gaps = 5/246 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+ G+VA+LG PN GKSTL NQ++G K+SIV++K QTTR + GI Q++L DTPGI
Sbjct: 90 RCGFVALLGAPNAGKSTLTNQLVGTKVSIVSHKVQTTRAIVRGIALDGAAQLVLVDTPGI 149
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA-PERIDEILEEGVGDHKDKLPILLV 232
K L+ M+ + + +AD I +LVDA + E I+ +L HK P L+
Sbjct: 150 FSPK-RRLERAMVSSAWTHAADADVIALLVDAKRGLDEDIEALLAPLSQIHK---PRALI 205
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK D+I+ + + D V VSA G GV D+R W ++PL P YP+D
Sbjct: 206 LNKIDIIRRDTLLALAAQINEKLAFDRVFMVSALTGDGVADVRRWFAEQVPLSPWLYPED 265
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
VS+ P R EI REK+F++ +E+PY V S+K I+ I VE+ SQ+
Sbjct: 266 QVSDAPMRMLAAEITREKMFLRLHDELPYRSTVETESWKELRNGSVRIEQTIYVERESQR 325
Query: 353 IILIGK 358
I++GK
Sbjct: 326 KIVLGK 331
>gi|116748319|ref|YP_845006.1| GTP-binding protein Era [Syntrophobacter fumaroxidans MPOB]
gi|116697383|gb|ABK16571.1| GTP-binding protein Era [Syntrophobacter fumaroxidans MPOB]
Length = 307
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 146/248 (58%), Gaps = 7/248 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSGYVA++G PNVGKSTL N+ + +K+SI KPQTTR+RILGI + P +Q++ DTPGI
Sbjct: 10 KSGYVALIGAPNVGKSTLLNRFLREKISITAPKPQTTRNRILGILTEPGFQIVFMDTPGI 69
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + +++ + AD + L++ + I++ + E +G + P++LV+
Sbjct: 70 HRAK-DRFNRVLVDTALATLGEADAVCFLIEIPEPDPEINDYILENLG--RIDTPVILVI 126
Query: 234 NKKD-LIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK D L + +E Y V+PVSA G G +++ ++ L GP YYP+D
Sbjct: 127 NKIDALADKSRLLPLIEKYRGRHSFHAVVPVSALQGEGTDELMTELVALLQEGPQYYPED 186
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV--VEKNS 350
+++ ERF V E+IREK+F EVPYA V+V + P K+ I +E V VE+ S
Sbjct: 187 HLTDQHERFLVAELIREKVFRLAHQEVPYAVAVSVERFAEIPE-KNRIDIEAVVHVERES 245
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 246 QKAIVIGK 253
>gi|354807993|ref|ZP_09041440.1| GTP-binding protein Era [Lactobacillus curvatus CRL 705]
gi|354513526|gb|EHE85526.1| GTP-binding protein Era [Lactobacillus curvatus CRL 705]
Length = 300
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
++SG+VA++G+PNVGKST N+MIG+K++I+++K QTTR++I GI + Q++ DTPG
Sbjct: 5 YRSGFVAIVGRPNVGKSTFMNRMIGEKIAIMSSKAQTTRNKIQGIYTDDNAQIVFVDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I K + LD M + S D I+ ++ D+ + + + + K P+ LV
Sbjct: 65 I-HKPHNELDEYMDQAALSTFNEVDAILFMISGIDKKGPGDQYIMDQLKNVKK--PVYLV 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D I P ++ +E Y D V P+SA G+ V ++ + LP GP YYP+D
Sbjct: 122 VNKIDAIHPDDLLPMIEQYRHELDFKGVYPISALEGNNVPEMLKELEQILPEGPQYYPED 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPE F VGE+IREKI EVP++ V V K R K I+ I+VE++ QK
Sbjct: 182 QLTDHPEYFVVGELIREKILELTHEEVPHSVAVVVERMKDRVNGKLQIEANIIVERDGQK 241
Query: 353 IILIGK 358
I+IG+
Sbjct: 242 RIIIGQ 247
>gi|188994054|ref|YP_001928306.1| GTP-binding protein Era [Porphyromonas gingivalis ATCC 33277]
gi|188593734|dbj|BAG32709.1| putative GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
Length = 299
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DTPG
Sbjct: 8 HRSGFVNIVGNPNVGKSTLMNLLVGERISIITSKAQTTRHRIMGIVNTPEMQIVYSDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + L M + SA +AD +V + D + ++ + L + + P+LLV
Sbjct: 68 VLRPN-YKLQQEMREFSESALGDADVLVYVTDVVEKADKNADFLARV---SRMECPVLLV 123
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL + K +E + E+ P+SA V ++ I + +P P Y+ KD
Sbjct: 124 INKIDLSNQEALEKLVEEWRNILPKAEIHPLSATNNFNVGLLQKRIESLIPPSPPYFEKD 183
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K T I+ I+VE+NSQK
Sbjct: 184 ALTDKPARFFVTEIIREKILLYYQKEIPYAAEVVVEEFKEEKTIIR-IKSLIIVERNSQK 242
Query: 353 IILIG 357
I+IG
Sbjct: 243 GIIIG 247
>gi|359403685|ref|ZP_09196589.1| GTPase Era [Spiroplasma melliferum KC3]
gi|358832916|gb|EHK52020.1| GTPase Era [Spiroplasma melliferum KC3]
Length = 297
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 148/248 (59%), Gaps = 10/248 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++ K++IVT K QTTR+RI GI + E Q++ DTPGI
Sbjct: 4 KSGFVAIVGRPNVGKSTLLNTILNNKVAIVTAKAQTTRNRIQGIYNDQESQIVFMDTPGI 63
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERI---DEILEEGVGDHKDKLPIL 230
K H + M K SA AD I+ L A ERI D + + + + +PI+
Sbjct: 64 -HKAHHEMGKFMNKVALSATKAADVILFL---APANERIGDNDRYIIKALQERA--IPIV 117
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+ K DL+ G++ K+ +EK VIPVSA +E + + T L +GP YYP
Sbjct: 118 LVVTKIDLVSKGDLMVKIAEWEKIHQFTAVIPVSAVKHKNLETLLILLKTHLEVGPQYYP 177
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNS 350
D++++ PE+F + EIIREKI + +E+P++ + + + +P I I VE++S
Sbjct: 178 DDMLTDQPEKFLIREIIREKILLLTEDEIPHSVAILIDKIEDQPQLLK-IMASICVERDS 236
Query: 351 QKIILIGK 358
QK I+IGK
Sbjct: 237 QKGIIIGK 244
>gi|334147073|ref|YP_004510002.1| GTP-binding protein Era [Porphyromonas gingivalis TDC60]
gi|333804229|dbj|BAK25436.1| GTP-binding protein Era [Porphyromonas gingivalis TDC60]
Length = 299
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 149/245 (60%), Gaps = 5/245 (2%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H+SG+V ++G PNVGKSTL N ++G+++SI+T+K QTTRHRI+GI + PE Q++ DTPG
Sbjct: 8 HRSGFVNIVGNPNVGKSTLMNLLVGERISIITSKAQTTRHRIMGIVNTPEMQIVYSDTPG 67
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
++ + L M + SA +AD +V + D + ++ + L + + P+LLV
Sbjct: 68 VLRPN-YKLQQEMREFSESALGDADVLVYVTDVVEKADKNADFLARV---SRMECPVLLV 123
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL + K +E + E+ P+SA V ++ I + +P P Y+ KD
Sbjct: 124 INKIDLSNQEALEKLVEEWHNILPKAEIHPLSATNNFNVGLLQKRIESLIPPSPPYFEKD 183
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++ P RFFV EIIREKI + Y+ E+PYA +V V +K T I+ I+VE+NSQK
Sbjct: 184 ALTDKPARFFVTEIIREKILLYYQKEIPYAAEVVVEEFKEEKTIIR-IKSLIIVERNSQK 242
Query: 353 IILIG 357
I+IG
Sbjct: 243 GIIIG 247
>gi|116629756|ref|YP_814928.1| GTP-binding protein Era [Lactobacillus gasseri ATCC 33323]
gi|420147062|ref|ZP_14654338.1| GTPase Era [Lactobacillus gasseri CECT 5714]
gi|116095338|gb|ABJ60490.1| GTPase [Lactobacillus gasseri ATCC 33323]
gi|398401063|gb|EJN54565.1| GTPase Era [Lactobacillus gasseri CECT 5714]
Length = 303
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 152/255 (59%), Gaps = 10/255 (3%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
++KSG+VA++G+PNVGKSTL N ++GQK++I++ +PQTTR++I GI + + Q++ DTP
Sbjct: 7 DYKSGFVALIGRPNVGKSTLLNFLVGQKVAIMSPQPQTTRNKISGIYTDDQEQIVFIDTP 66
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVD---ACKAPERIDEILEEGVGDHKDKLP 228
GI + K + LD M K+ SA D ++ +V+ A K + I E+L+ K K P
Sbjct: 67 GIHKPK-NKLDDFMDKSSYSALDEVDVVLFMVEPEPAGKGDQYIAELLK------KIKKP 119
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D + P ++ ++ Y+ D E++P+SA G+ V ++ I LP GP +
Sbjct: 120 VFLVINKIDKVHPDKLLSIIDSYKNLGDFAEIVPISASQGNNVSELIKTIAKYLPEGPQF 179
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
Y D +++ PE F V E+IRE++ EVP+A V V + K I+ I VE+
Sbjct: 180 YDADQLTDRPEYFIVAELIREQVLKLTHEEVPHATAVVVDRMRDHEGGKLQIEATIYVER 239
Query: 349 NSQKIILIGKVSPFL 363
QK I+IGK L
Sbjct: 240 PGQKGIIIGKKGQML 254
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,912,165,678
Number of Sequences: 23463169
Number of extensions: 252267286
Number of successful extensions: 917623
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9918
Number of HSP's successfully gapped in prelim test: 12501
Number of HSP's that attempted gapping in prelim test: 888846
Number of HSP's gapped (non-prelim): 27741
length of query: 363
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 219
effective length of database: 8,980,499,031
effective search space: 1966729287789
effective search space used: 1966729287789
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)