BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017937
(363 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B3ETC6|ERA_AMOA5 GTPase Era OS=Amoebophilus asiaticus (strain 5a2) GN=era PE=3 SV=1
Length = 296
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 164/249 (65%), Gaps = 11/249 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H++G+V ++GKPNVGKSTL N+++G++LSI+T K QTTRH I GI S ++Q+I DTPG
Sbjct: 6 HQAGFVTIIGKPNVGKSTLMNRLVGERLSIITPKAQTTRHSICGIVSDTDFQIIFTDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA--CKAPERIDEILEEGVGDHKDKLPIL 230
I+ K + L MM ++ A ++ D ++ LVD + P ++++L +G ++P+L
Sbjct: 66 IL-KPAYELQESMMHMLQHALVDTDVLLWLVDIKEKEVPPIVEKVLAQG------RIPVL 118
Query: 231 LVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L++NK DLI E + L E++++ +V ++IP++A G +E + IL LP P +Y
Sbjct: 119 LLINKIDLIAGQEALESLVEYWKQKVNVAQIIPIAALQGFQIEQLLKHILVYLPAHPPFY 178
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
PKD++++ PERFFV EIIRE+I +Y+ E+PYA +V + +K + I I VEK
Sbjct: 179 PKDMLTDRPERFFVAEIIREQILYKYQQEIPYAVEVVIEEFKEEASLIR-ISAMIYVEKK 237
Query: 350 SQKIILIGK 358
SQK ILIGK
Sbjct: 238 SQKGILIGK 246
>sp|P64086|ERA_STAAW GTPase Era OS=Staphylococcus aureus (strain MW2) GN=era PE=3 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|A8Z4A6|ERA_STAAT GTPase Era OS=Staphylococcus aureus (strain USA300 / TCH1516)
GN=era PE=3 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q6G900|ERA_STAAS GTPase Era OS=Staphylococcus aureus (strain MSSA476) GN=era PE=3
SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q6GGD3|ERA_STAAR GTPase Era OS=Staphylococcus aureus (strain MRSA252) GN=era PE=3
SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|P64085|ERA_STAAN GTPase Era OS=Staphylococcus aureus (strain N315) GN=era PE=1 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|P64084|ERA_STAAM GTPase Era OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=era PE=1 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|A6QHB0|ERA_STAAE GTPase Era OS=Staphylococcus aureus (strain Newman) GN=era PE=3
SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q5HFJ3|ERA_STAAC GTPase Era OS=Staphylococcus aureus (strain COL) GN=era PE=3 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|A5IT95|ERA_STAA9 GTPase Era OS=Staphylococcus aureus (strain JH9) GN=era PE=3 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q2FGF6|ERA_STAA3 GTPase Era OS=Staphylococcus aureus (strain USA300) GN=era PE=3
SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|A6U239|ERA_STAA2 GTPase Era OS=Staphylococcus aureus (strain JH1) GN=era PE=3 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|A7X2W5|ERA_STAA1 GTPase Era OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
GN=era PE=3 SV=1
Length = 299
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q2YT12|ERA_STAAB GTPase Era OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=era PE=3 SV=1
Length = 299
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 157/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALDGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q2FY06|ERA_STAA8 GTPase Era OS=Staphylococcus aureus (strain NCTC 8325) GN=era PE=3
SV=2
Length = 299
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 156/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGEIIREKI E+P+A VNV + I+ I VE+ SQK
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERGSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|C6E2H7|ERA_GEOSM GTPase Era OS=Geobacter sp. (strain M21) GN=era PE=3 SV=1
Length = 297
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 155/254 (61%), Gaps = 11/254 (4%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +SG+V+++G+PNVGKSTL N+++G+KL I ++KPQTTR+RI GI + P Q++
Sbjct: 2 SEKKFRSGFVSIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNRIKGIHNVPGGQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHK 224
DTPGI K L+ M+ S+ D I+ LVD PE+ I E+L GV
Sbjct: 62 DTPGIHRAK-SRLNKFMVDEALSSVQGVDLILFLVDGAVDPEKEAGMIKEVLS-GV---- 115
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
P++LV+NK DL+ GE+ +++ Y E+IPVSA G GVE + + LP
Sbjct: 116 -DAPVILVMNKIDLVPKGELLERMSCYGDTYPFKEIIPVSAGTGDGVEQLVQLVHGLLPE 174
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEI 344
GP Y+P DI+++ PERF V EI+REKIF +EVPY+ V V S+K R I I
Sbjct: 175 GPCYFPDDILTDVPERFIVAEIVREKIFRLTHDEVPYSTAVVVDSFKERENGVVAISATI 234
Query: 345 VVEKNSQKIILIGK 358
VE++SQK I+IGK
Sbjct: 235 NVERDSQKGIIIGK 248
>sp|B2V2K0|ERA_CLOBA GTPase Era OS=Clostridium botulinum (strain Alaska E43 / Type E3)
GN=era PE=3 SV=1
Length = 295
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 157/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D+
Sbjct: 120 NKIDESTPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PERF V EI+REK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVPERFVVSEIVREKALRCLRDEVPHGIAVDIIQMKQSDNGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 240 IIIGKNGQML 249
>sp|B2TMB9|ERA_CLOBB GTPase Era OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=era PE=3 SV=1
Length = 295
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 157/250 (62%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGEDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D+
Sbjct: 120 NKIDESTPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ PERF V EI+REK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVPERFVVSEIVREKALRCLRDEVPHGIAVDIIQMKQSDNGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGKVSPFL 363
I+IGK L
Sbjct: 240 IIIGKNGQML 249
>sp|Q8Y750|ERA_LISMO GTPase Era OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=era PE=3 SV=1
Length = 301
Score = 191 bits (484), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>sp|Q71ZK8|ERA_LISMF GTPase Era OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=era PE=3 SV=1
Length = 301
Score = 191 bits (484), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>sp|C1KVA9|ERA_LISMC GTPase Era OS=Listeria monocytogenes serotype 4b (strain CLIP80459)
GN=era PE=3 SV=1
Length = 301
Score = 191 bits (484), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>sp|Q92BP8|ERA_LISIN GTPase Era OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=era PE=3 SV=1
Length = 301
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEDLIKLIEQYRELMDFEEIIPISALEGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>sp|A0AIR3|ERA_LISW6 GTPase Era OS=Listeria welshimeri serovar 6b (strain ATCC 35897 /
DSM 20650 / SLCC5334) GN=era PE=3 SV=1
Length = 301
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEDLFKLIEQYRELLDFEEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>sp|B8DE49|ERA_LISMH GTPase Era OS=Listeria monocytogenes serotype 4a (strain HCC23)
GN=era PE=3 SV=1
Length = 301
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMEFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRP-TAKDFIQVEIVVEKNSQK 352
+++HPERF + E+IRE++ R EVP++ V + + P T K I I+VE+++QK
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQK 242
Query: 353 IILIGKVSPFL 363
I+IGK L
Sbjct: 243 GIIIGKQGQML 253
>sp|Q39T84|ERA_GEOMG GTPase Era OS=Geobacter metallireducens (strain GS-15 / ATCC 53774
/ DSM 7210) GN=era PE=3 SV=1
Length = 298
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 158/252 (62%), Gaps = 6/252 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+V+++G+PNVGKSTL N+++G+K+ I ++KPQTTR+RI GI + P Q++ DTPGI
Sbjct: 7 RSGFVSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNVPGAQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP-ERIDEILEEGVGDHKDKLPILLV 232
+ + L+ M++ SA D ++ LV+A + P E+ EI++ G P+ LV
Sbjct: 67 HQAR-SRLNKYMVEVALSAIREVDLVLFLVEANQKPGEQEQEIIDVLAGATA---PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL + G + +++ Y+ E++P+SA G GV+ + + + LP GP Y+P D
Sbjct: 123 INKVDLTEKGAVLERIAAYKDRYPFREIVPISAGTGDGVDHLVELVRKALPQGPVYFPDD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDF-IQVEIVVEKNSQ 351
I+++ PERF EIIREK+F R+EVPYA V V S+K R I I VE++SQ
Sbjct: 183 ILTDVPERFIAAEIIREKVFRMTRDEVPYATAVEVDSFKEREDGGLVSIAATITVERDSQ 242
Query: 352 KIILIGKVSPFL 363
K I+IGK L
Sbjct: 243 KGIIIGKKGAML 254
>sp|Q8XIU8|ERA_CLOPE GTPase Era OS=Clostridium perfringens (strain 13 / Type A) GN=era
PE=3 SV=1
Length = 296
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIVEQLKNQK--APVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>sp|Q49Y10|ERA_STAS1 GTPase Era OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=era PE=3 SV=1
Length = 299
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ + D I+ +V+ + R DE + E + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMEML--KTIKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F VGE+IREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVGELIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q0TNU5|ERA_CLOP1 GTPase Era OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=era PE=3 SV=1
Length = 296
Score = 188 bits (477), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGEDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK--APVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>sp|Q0SRG1|ERA_CLOPS GTPase Era OS=Clostridium perfringens (strain SM101 / Type A)
GN=era PE=3 SV=1
Length = 296
Score = 187 bits (476), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK--APVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EI+REK EVP+ V+V+ K K I+V+++ EK S K
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAVDVIQMKQDDNGKYNIEVDLICEKASHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>sp|Q4L6R7|ERA_STAHJ GTPase Era OS=Staphylococcus haemolyticus (strain JCSC1435) GN=era
PE=3 SV=2
Length = 299
Score = 187 bits (476), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEEIGRGDEYIMEMLKN--VKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + ++E Y+K+ + E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDALMPRIEQYQKYMNFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + ++ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKENDERVRVEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q8EPY0|ERA_OCEIH GTPase Era OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=era PE=3 SV=1
Length = 300
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 158/252 (62%), Gaps = 3/252 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+++++G+PNVGKST N++IGQK++I+++K QTTR++I G+ + + QMI DTP
Sbjct: 4 NFKSGFLSIIGRPNVGKSTFMNKVIGQKIAIMSDKAQTTRNKIQGVFTTNDAQMIFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M++ D I+ +++A + R D+ + + + K P+ L
Sbjct: 64 GIHKPK-HRLGDFMVQIAEDTLNEVDSILFMINADEGYGRGDQYIIDLL--QKVNSPVFL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DLI P ++ +E Y+ D +E+IP+SA G+ V+ + D + LP GP YYP+
Sbjct: 121 IINKIDLIHPDQLLPLIEKYKSLYDFEEIIPISALEGNNVDHLVDVLKEHLPEGPQYYPE 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
D V++HPERF + E+IREK+ + EVP++ V + + + K IQ IV E++SQ
Sbjct: 181 DQVTDHPERFVISELIREKVLHLTKEEVPHSIAVVIENIEKNENEKLLIQATIVTERSSQ 240
Query: 352 KIILIGKVSPFL 363
K ILIGK L
Sbjct: 241 KGILIGKQGTML 252
>sp|B0TAF1|ERA_HELMI GTPase Era OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=era PE=3 SV=1
Length = 299
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 151/250 (60%), Gaps = 3/250 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+++++G+PNVGKSTL NQ+IG+K++I+++KPQTTR+RI+G+ + P+ Q I DTPGI
Sbjct: 5 RSGFISIIGRPNVGKSTLMNQLIGKKVAIMSDKPQTTRNRIVGVLNAPKGQAIFLDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L +M+ R D I+ +VDA + P ++ + + + D K P+ LV+
Sbjct: 65 HKPK-HKLGEIMVTTARKTLGEVDLILYVVDASEEPGGGEQFISQMLKDIKT--PVFLVV 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + E KK+ Y + E+IPVSAK ++ ++D I KLP GP YYP
Sbjct: 122 NKMDTVSREEGLKKISQYSQMVAWQELIPVSAKEKTNLDRLKDLIFAKLPEGPLYYPAGS 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
++ PER + E+IREK+ R E+P++ V + + P + I E++SQK
Sbjct: 182 FTDQPERQLMAEMIREKVLHATREEIPHSVAVIIEHLQETPKGGMVVHATIFTERDSQKG 241
Query: 354 ILIGKVSPFL 363
ILIGK L
Sbjct: 242 ILIGKGGSLL 251
>sp|B1HTJ0|ERA_LYSSC GTPase Era OS=Lysinibacillus sphaericus (strain C3-41) GN=era PE=3
SV=1
Length = 305
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 160/257 (62%), Gaps = 5/257 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI
Sbjct: 4 TRSGYKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTTDSQMIFI 63
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L M+K ++ D I+ +V+A + + DE + E + + P
Sbjct: 64 DTPGIHKPK-HKLGDFMLKVAKNTLREVDVIMFMVNAEQKLGKGDEFILEMLAG--NSTP 120
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ LV+NK D I P E+ +E Y++ + E+IP+SA G+ VE + D + LP GP Y
Sbjct: 121 VFLVINKIDQIHPDELLGIIESYKERYEFAEIIPISALQGNNVESLLDTLPKYLPEGPQY 180
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVE--IVV 346
YP D V++HPERF + E+IREK+ R E+P++ V + + D I V I+V
Sbjct: 181 YPADQVTDHPERFIIYELIREKVLHLTREEIPHSIAVVIDKIRRDEENNDKIHVAATIMV 240
Query: 347 EKNSQKIILIGKVSPFL 363
E++SQK I+IGK L
Sbjct: 241 ERDSQKGIVIGKRGALL 257
>sp|Q831T9|ERA_ENTFA GTPase Era OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=era PE=3 SV=1
Length = 300
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 155/239 (64%), Gaps = 3/239 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQ 351
+++HPE F V E+IREK+ + R+E+P++ V V S K K +Q I+VE++SQ
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAVVVDSMKRDENDKVHVQATIIVERDSQ 240
>sp|Q5HNY0|ERA_STAEQ GTPase Era OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=era PE=3 SV=1
Length = 299
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIETTIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q8CP21|ERA_STAES GTPase Era OS=Staphylococcus epidermidis (strain ATCC 12228) GN=era
PE=3 SV=1
Length = 299
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V EIIREKI E+P+A VNV + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGVNVDRMIKEDEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|B3WEL1|ERA_LACCB GTPase Era OS=Lactobacillus casei (strain BL23) GN=era PE=3 SV=1
Length = 300
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 161/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>sp|A6LRP9|ERA_CLOB8 GTPase Era OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=era PE=3 SV=1
Length = 298
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDKK--CPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK LE Y K E++P+SA G V+ + + + +P GP YYP D+
Sbjct: 120 NKVDESTQDRVAKSLEMYSKEFKFAEIVPISAIKGKNVDVLVELMKKAMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ E+F V EIIREK R+EVP+ V+++ K I+V+++ EK+S K
Sbjct: 180 ITDVQEKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEIGTYHIEVDLICEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>sp|Q038T2|ERA_LACC3 GTPase Era OS=Lactobacillus casei (strain ATCC 334) GN=era PE=3
SV=1
Length = 300
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 160/258 (62%), Gaps = 17/258 (6%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA + V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMENNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIV 345
P YYP+D +++HPE F VGE+IREKI R+EVP+A V V K R K I+ I+
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAVQVERMKDREGGKLQIEAYII 233
Query: 346 VEKNSQKIILIGKVSPFL 363
VE++SQK I+IG+ L
Sbjct: 234 VERDSQKGIIIGRGGQML 251
>sp|Q9KD52|ERA_BACHD GTPase Era OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=era PE=3 SV=1
Length = 304
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 155/255 (60%), Gaps = 12/255 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA----PERIDEILEEGVGDHKDKLPI 229
+ K H L MMK ++ D I+ +VD +A E I E L+E K P+
Sbjct: 69 HKPK-HKLGDFMMKVAQNTLKEVDLILYVVDGAEAFGPGEEFIIERLKEA------KTPV 121
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+LV+NK D + P ++ +E Y + +EV+PVSA G+ V + I L GP YY
Sbjct: 122 ILVINKIDKVHPDDLLSLIETYRHKHEFEEVVPVSALQGNNVPTLLLEITKHLSEGPQYY 181
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKD-FIQVEIVVEK 348
P D V++HPERF + E+IREK+ R E+P++ V + K R +I IVVE+
Sbjct: 182 PSDQVTDHPERFVIAELIREKVLHLTREEIPHSIAVVIEQIKRRQHQDTVYIGATIVVER 241
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 242 SSQKGIIIGKQGKML 256
>sp|A5G693|ERA_GEOUR GTPase Era OS=Geobacter uraniireducens (strain Rf4) GN=era PE=3
SV=1
Length = 297
Score = 181 bits (458), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 151/250 (60%), Gaps = 3/250 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +SG+V+++G+PNVGKSTL N+++G K+ I ++KPQTTR+RI GI + P QM+
Sbjct: 2 TEKQFRSGFVSIIGRPNVGKSTLLNRILGDKIVITSDKPQTTRNRIQGIHNLPGCQMVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K L+ M+ S+ D I+ LV+A P + ++ E + + P
Sbjct: 62 DTPGIHRAK-SKLNKYMVDVALSSIKEVDVILFLVEADAKPANQEGMILELLANADA--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL+ + +++ Y E++PVSA G GVE + + + +P GP Y
Sbjct: 119 VLLVINKIDLVAKEALLERIAAYAALYPFREIVPVSALSGDGVERLVEVVHGFIPAGPPY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
+P DI+++ PERF V E+IREKIF +EVPY+ V V S+K R I I VE+
Sbjct: 179 FPDDILTDLPERFIVAEMIREKIFRLTHDEVPYSVAVVVESFKERADGLVSIAAAINVER 238
Query: 349 NSQKIILIGK 358
SQK I+IGK
Sbjct: 239 ESQKGIVIGK 248
>sp|P42182|ERA_BACSU GTPase Era OS=Bacillus subtilis (strain 168) GN=era PE=1 SV=1
Length = 301
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 155/255 (60%), Gaps = 3/255 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y K E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEK 348
YP D V++HPERF + E+IREK+ R E+P++ V + S K + + IVVE+
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVAIESIKGQDNGSVHVAATIVVER 238
Query: 349 NSQKIILIGKVSPFL 363
+SQK I+IGK L
Sbjct: 239 DSQKGIVIGKKGSLL 253
>sp|Q5WHD9|ERA_BACSK GTPase Era OS=Bacillus clausii (strain KSM-K16) GN=era PE=3 SV=1
Length = 303
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 157/254 (61%), Gaps = 11/254 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N++IGQK++I+++KPQTTR+++ G+ + + Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNRVIGQKIAIMSDKPQTTRNKVQGVLTRDDAQLVFMDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCI--VVLVDACKAP--ERIDEILEEGVGDHKDKLPI 229
+ K H L MMK ++ D I VV DA P + I E L+E K P+
Sbjct: 69 HKPK-HRLGDFMMKVAKNTLREVDLILYVVEADAKFGPGEQYIIERLQE------TKTPV 121
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L++NK D + P E+ K ++ Y+ E+IP+SA G+ V + + I+ + GP YY
Sbjct: 122 FLLINKIDKVSPEELLKVIDLYKDRYPFAEIIPISALEGNNVPTLVEQIVEHMEEGPQYY 181
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKN 349
P D V++HPERF + E+IREK+ + E+P++ V + K R K ++ ++VE++
Sbjct: 182 PADQVTDHPERFIIAELIREKVLHLTKEEIPHSVAVVIEQIKKRDNGKVYVGATVIVERS 241
Query: 350 SQKIILIGKVSPFL 363
SQK I+IGK L
Sbjct: 242 SQKGIIIGKHGAML 255
>sp|B9DNL3|ERA_STACT GTPase Era OS=Staphylococcus carnosus (strain TM300) GN=era PE=3
SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 153/246 (62%), Gaps = 3/246 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKST N+++G K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVAIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIHGVMTEDDAQIIFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D ++ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLTEVDAVIFMVNANEEIGRGDEYIMEMLKN--IKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL+ P +I +E YEK E +P+SA G V+ + + + +P GP YYP
Sbjct: 121 INKIDLVHPDQIMPIIESYEKHMHFTEAVPMSALEGLNVDHFINVLKSYMPEGPQYYPDG 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+S+HPE+F V E+IREK+ E+P++ VNV + + I+ I VE++SQK
Sbjct: 181 QISDHPEQFVVSELIREKVLHLTSEEIPHSIGVNVDRMVKQSEDRVRIEATIYVERDSQK 240
Query: 353 IILIGK 358
I+IGK
Sbjct: 241 GIVIGK 246
>sp|Q03F63|ERA_PEDPA GTPase Era OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
GN=era PE=3 SV=1
Length = 304
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 158/262 (60%), Gaps = 6/262 (2%)
Query: 102 IEEFDYASHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGP 161
+EE + A H SG+VA++G+PNVGKST N +IGQK++I++N PQTTR++I GI +
Sbjct: 1 MEENNQAFH----SGFVAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTD 56
Query: 162 EYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVG 221
Q++ DTPGI K + L M+++ S+ D I+ +V+A + D + E +
Sbjct: 57 REQIVFIDTPGI-HKSHNKLGDFMVQSAMSSLNEVDAIMFMVNADEPRGAGDNYIIERLK 115
Query: 222 DHKDKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTK 281
D+ P+ LV+NK DL+ P E+ ++ Y+ D EV P+SA G+ + ++ +
Sbjct: 116 KITDR-PVYLVINKIDLVHPDELLPIVDSYKDAMDWTEVFPISALQGNNINELVTTLSQH 174
Query: 282 LPLGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQ 341
+P GP YYP D V++HPERF V E+IREK+ R EVP++ V + + K+ IQ
Sbjct: 175 MPEGPKYYPDDQVTDHPERFVVSELIREKVLQLTRQEVPHSVAVVIETMKSNDEGLVNIQ 234
Query: 342 VEIVVEKNSQKIILIGKVSPFL 363
I+V+++SQK I+IGK L
Sbjct: 235 ATIIVDRSSQKGIVIGKGGKML 256
>sp|Q88VS0|ERA_LACPL GTPase Era OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB
8826 / WCFS1) GN=era PE=3 SV=1
Length = 302
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 156/256 (60%), Gaps = 17/256 (6%)
Query: 115 SGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGII 174
SG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR+RI GI + + QM+ DTPGI
Sbjct: 9 SGFVAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGI- 67
Query: 175 EKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDH--KDKL----- 227
K L M+K+ S D ++ +++A DE G GD+ D+L
Sbjct: 68 HKPHSRLGDFMVKSALSTLGEVDAVLFMINA-------DE--RRGAGDNFIIDRLKTVKQ 118
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
PI LV+NK D + P + + ++ Y+ EV P+SA G+ V+++ + +LP GP
Sbjct: 119 PIYLVINKIDQVHPDHLLEIMDQYKDALPWKEVYPISALEGNNVDELLTTLKGQLPEGPQ 178
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVE 347
YYP D +++HPERF + E+IREK+ R EVP++ V + S K + K +Q I++E
Sbjct: 179 YYPSDQITDHPERFIISELIREKVLELTRQEVPHSTAVVIDSIKRQDEEKIHVQATIIIE 238
Query: 348 KNSQKIILIGKVSPFL 363
++SQK I+IGK L
Sbjct: 239 RSSQKGIIIGKGGSML 254
>sp|A0Q1Q0|ERA_CLONN GTPase Era OS=Clostridium novyi (strain NT) GN=era PE=3 SV=1
Length = 294
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 148/245 (60%), Gaps = 3/245 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I + + +YQ++ DTPGI
Sbjct: 3 KSGFISIIGRPNVGKSTLTNEILGEKLSIVSCRPQTTRNNIRAVLTRDDYQLVFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K H L M+K ++ D IV + + DE++ EG+ + K P+ LV+
Sbjct: 63 -HKPRHKLGEYMVKAAETSTDEVDLIVFITTPEGEISKGDELILEGLKNSKK--PVFLVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK L+ Y ++ D E+IP+SA+ V+ + + ++ +P GP YYP+D+
Sbjct: 120 NKIDENPQELVAKTLKQYSEYMDFAEIIPISARKSKNVDTLLELMIKYMPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKI 353
+++ ERF V EIIREK EVP+ V ++S K I ++ EK+S K
Sbjct: 180 ITDVQERFVVSEIIREKALKLLSEEVPHGIAVEIISMKQSKRGTYHIDANLLCEKDSHKG 239
Query: 354 ILIGK 358
I+IGK
Sbjct: 240 IIIGK 244
>sp|Q03Y33|ERA_LEUMM GTPase Era OS=Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / NCDO 523) GN=era PE=3 SV=1
Length = 303
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 155/246 (63%), Gaps = 3/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N+++G+K++I+++K QTTR++I GI + + Q++ DTPG+
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPGV 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+K+ SA AD I +VDA A R D+ + + + + K+ PI L++
Sbjct: 67 -HKPQNSLGDFMVKSAFSALHEADAIWFVVDASMARGRGDDFIIDRLQEVKNT-PIYLLI 124
Query: 234 NKKDLIKPGEIAKKLEWYEKFT-DVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
NK DL+ P ++ + Y+ + EV P+SA G V ++ D I++ L GP Y+ D
Sbjct: 125 NKVDLLAPNDLLDVIASYQNDAPEWAEVFPISATEGDNVPELLDNIVSHLDEGPQYFDAD 184
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF +GE+IREK+ R EVP++ V + K IQ I+VE+ +QK
Sbjct: 185 QLTDHPERFVIGELIREKVLQLTRQEVPHSVAVVIDKIARENEEKIHIQASIIVERPTQK 244
Query: 353 IILIGK 358
I+IGK
Sbjct: 245 NIIIGK 250
>sp|P0A3C2|ERA_LACLM GTPase Era OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=era PE=3 SV=1
Length = 303
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 152/246 (61%), Gaps = 4/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++ DTPGI
Sbjct: 7 KSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+++ S D ++ +V A + + ++ E + K ++P++LV+
Sbjct: 67 -HKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVPVILVV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P + + + Y + EV+P+SAK G+ E + D + KL GP Y+P+D
Sbjct: 124 NKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQYFPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI + R EVP++ V + T K I I+VE+ SQK
Sbjct: 184 ITDHPERFLVSEMIREKILLLTREEVPHSIAVTTDQMTRDEETGKIHIMATIIVERKSQK 243
Query: 353 IILIGK 358
I++GK
Sbjct: 244 GIILGK 249
>sp|P0A3C1|ERA_LACLA GTPase Era OS=Lactococcus lactis subsp. lactis (strain IL1403)
GN=era PE=3 SV=1
Length = 303
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 152/246 (61%), Gaps = 4/246 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++ DTPGI
Sbjct: 7 KSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+++ S D ++ +V A + + ++ E + K ++P++LV+
Sbjct: 67 -HKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVPVILVV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P + + + Y + EV+P+SAK G+ E + D + KL GP Y+P+D
Sbjct: 124 NKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQYFPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVNVVSY-KTRPTAKDFIQVEIVVEKNSQK 352
+++HPERF V E+IREKI + R EVP++ V + T K I I+VE+ SQK
Sbjct: 184 ITDHPERFLVSEMIREKILLLTREEVPHSIAVTTDQMTRDEETGKIHIMATIIVERKSQK 243
Query: 353 IILIGK 358
I++GK
Sbjct: 244 GIILGK 249
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,998,641
Number of Sequences: 539616
Number of extensions: 6261367
Number of successful extensions: 25758
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 1817
Number of HSP's that attempted gapping in prelim test: 21575
Number of HSP's gapped (non-prelim): 4267
length of query: 363
length of database: 191,569,459
effective HSP length: 119
effective length of query: 244
effective length of database: 127,355,155
effective search space: 31074657820
effective search space used: 31074657820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)