BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017939
(363 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224058355|ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
gi|222846744|gb|EEE84291.1| high mobility group family [Populus trichocarpa]
Length = 498
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/365 (68%), Positives = 293/365 (80%), Gaps = 12/365 (3%)
Query: 4 SDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQT---PSQSPIPNPPDAGLSKENHES 60
+D A P K +R+ALK KN NEA +MAQ PS + + P D SKEN ES
Sbjct: 2 ADTAVAPTVPKKSRNNRKALKQKNPSTNEANIMAQKLPEPSPASVLPPSDTDSSKENLES 61
Query: 61 LSQPKKA-----AAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEM 115
LSQP+ + + KAKQ + +SF+KD QEMQEML+++KLEKEKTE LLKEKDEM
Sbjct: 62 LSQPRSSPKKGKSKAAKAKQNKEAAASSFEKDFQEMQEMLQQLKLEKEKTEVLLKEKDEM 121
Query: 116 LKMKEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCA-ERK 174
LK K+EE+E++GKEQEK+ ELKKLQK+KEFKP MTLP VQ L +KEQD+KKK E K
Sbjct: 122 LKAKDEEIEMKGKEQEKMKTELKKLQKLKEFKPIMTLPFVQVLNEKEQDKKKKKGGNEIK 181
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP PPY LWCKDQWNE KKENP+AEFK+I++ILGAKWK ++AEEKKPYEEKYQ EKEAYL
Sbjct: 182 RPCPPYSLWCKDQWNEVKKENPDAEFKDISHILGAKWKTITAEEKKPYEEKYQVEKEAYL 241
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADK---ENKKPKKEKDPLKPKH 291
++M KE+RESEAMKLLEEE KQKTAMELLEQYLQFKQEA + + K KKEKDPLKPKH
Sbjct: 242 KLMTKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQEAGQEENKKNKTKKEKDPLKPKH 301
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P++A+FLFS+ERRAALLA+NKNVLEVAKI GEEWKNMTE+QKRPYEEIAKKNKEKY +EM
Sbjct: 302 PLSAFFLFSNERRAALLAENKNVLEVAKIAGEEWKNMTEKQKRPYEEIAKKNKEKYTQEM 361
Query: 352 EAYKR 356
EAYK+
Sbjct: 362 EAYKQ 366
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 96/170 (56%), Gaps = 13/170 (7%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEH----- 254
E+ I G +WKN++ ++K+PYEE + KE Y Q M K+ ++ EAM L +E
Sbjct: 326 EVAKIAGEEWKNMTEKQKRPYEEIAKKNKEKYTQEMEAYKQNKDEEAMNLKKEGEELMKL 385
Query: 255 KQKTAMELLEQYLQ----FKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLAD 310
+++ A++LL++ + K+ ++ KK ++ DP KPK P +++ LFS E R +L+ +
Sbjct: 386 QKQEALQLLKKKEKTENIIKKTKEQRQKKQQQNADPNKPKKPASSFLLFSKETRKSLVHE 445
Query: 311 NK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
+ N + + +WK + +E+K+ + A + E Y +E+E Y + +
Sbjct: 446 HPGINSSTLTAMISVKWKELIQEEKQIWNCKAAEAMEAYKKELEEYHKSV 495
>gi|225426010|ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-like [Vitis vinifera]
Length = 505
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/359 (71%), Positives = 299/359 (83%), Gaps = 14/359 (3%)
Query: 9 MAVEPSKKPR-SRRALKPKNSLANEAVVMAQTPSQS---PIPNPP-DAGLSKENHESLSQ 63
MAV P KK R SR+ALK K+S N+A ++A S+S P+P P DAG KENHESLSQ
Sbjct: 10 MAV-PIKKARTSRKALKEKSSSTNKANILAGQISESSPAPVPTPSEDAG--KENHESLSQ 66
Query: 64 PKKAAAKGKAKQATKK--QDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEE 121
P K K Q KK + SF++DLQEMQE LE+++LEKEKTEELLK +DEMLK+KEE
Sbjct: 67 PLSGKKKSKGAQKGKKSKESQSFERDLQEMQEKLEQLRLEKEKTEELLKARDEMLKIKEE 126
Query: 122 ELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKK---GCAERKRPSP 178
ELE +G+EQEKL MELKKLQK+KEFKP +T P+ L+DKEQ++K+K GC E KRPSP
Sbjct: 127 ELETRGREQEKLQMELKKLQKLKEFKPTVTFPL-HSLRDKEQEKKEKNKKGCPETKRPSP 185
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
Y+LWCKDQWNEAKK NP+A+FKEI+NILGAKWK +SAEEKKPYEEKYQAEKEAYLQ++
Sbjct: 186 SYVLWCKDQWNEAKKANPDADFKEISNILGAKWKTISAEEKKPYEEKYQAEKEAYLQIVG 245
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFL 298
KE+RE+EAM+LLEEE KQKTAMELLEQYLQFKQ A+KENKK KKEKDPLKPKHPV+A+FL
Sbjct: 246 KEKRENEAMRLLEEEQKQKTAMELLEQYLQFKQGAEKENKKKKKEKDPLKPKHPVSAFFL 305
Query: 299 FSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
FS ERRAALL ++KNVLE+AKI GEEWKNMTE+QKRPYEEIAKKNK KY EEME YK++
Sbjct: 306 FSKERRAALLGEDKNVLEIAKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQEEMELYKQQ 364
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 29/178 (16%)
Query: 202 EITNILGAKWKNVSAEEKKPYEE-------KYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
EI I G +WKN++ ++K+PYEE KYQ E E Y Q ++ E+E +K EEE
Sbjct: 323 EIAKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQEEMELYKQ---QKDEEAEDLKKGEEEQ 379
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEK------------DPLKPKHPVTAYFLFSSE 302
+ E L Q L+ K++ + KK K+ + DP KPK P +++ LFS E
Sbjct: 380 MKIQKHEAL-QLLKKKEKTENIIKKTKENRQKKKKQKEKANSDPNKPKKPASSFLLFSKE 438
Query: 303 RRAALLAD----NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
R + L + N + L + +WK + EE+++ + + AK+ E Y +E+E Y +
Sbjct: 439 ARNSFLQERPGINNSTLNA--LISVKWKELDEEERKIWNDKAKEAMEAYQKELEEYNK 494
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/366 (67%), Positives = 289/366 (78%), Gaps = 22/366 (6%)
Query: 13 PSKKPRSRR--ALKPKNSLANEAVVMAQTPSQ-SPIPNPPD--AGLSKENHESLSQPKKA 67
P+KKPR +R LK KN NEA +MAQ S SP+P PP A SKENHESLSQP+ +
Sbjct: 15 PTKKPRKKRNHPLKEKNPSTNEANIMAQKLSAISPVPAPPSDAADASKENHESLSQPRSS 74
Query: 68 -------------AAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDE 114
K + + SF+K++QEMQEML+K+KLEKEKT+ELLKEKDE
Sbjct: 75 PKKLKAKAATKAKQTKQSSSSSATTTTNSFEKEMQEMQEMLQKLKLEKEKTDELLKEKDE 134
Query: 115 MLKMKEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERK 174
+LK K+EELE +GKEQEKL MELKKLQK+KEFKPNM P++Q ++EQD+KKK
Sbjct: 135 ILKAKQEELENKGKEQEKLQMELKKLQKLKEFKPNMNFPLLQSF-NEEQDKKKKKKKGGH 193
Query: 175 ---RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKE 231
RPSPPYILWCKDQWNE K ENP AEFKEI+NILGAKWKNVS E+KKPYE+KYQAEKE
Sbjct: 194 EKKRPSPPYILWCKDQWNEVKNENPNAEFKEISNILGAKWKNVSTEDKKPYEDKYQAEKE 253
Query: 232 AYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKH 291
YLQV+ KE+RESEAMKLLEEE KQKTAMELLEQYLQFKQE +KENKK KKEKDPLKPK
Sbjct: 254 VYLQVVNKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQETEKENKKTKKEKDPLKPKQ 313
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P++A+FLFS+ERRA+LLA+NKNV EVAKI GE+WKNMTEEQK PYEE+AK+NK +Y +EM
Sbjct: 314 PMSAFFLFSNERRASLLAENKNVREVAKIAGEQWKNMTEEQKGPYEEMAKRNKLRYMQEM 373
Query: 352 EAYKRR 357
EAYK++
Sbjct: 374 EAYKQK 379
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 110/202 (54%), Gaps = 27/202 (13%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P + L+ ++ EN +E+ I G +WKN++ E+K PYEE + K Y
Sbjct: 312 KQPMSAFFLFSNERRASLLAEN--KNVREVAKIAGEQWKNMTEEQKGPYEEMAKRNKLRY 369
Query: 234 LQVM--AKERRESEAMKLLEEEH-----KQKTAMELLEQYLQFKQEAD------KENKKP 280
+Q M K++++ EAM L +EE +++ A++LL++ K++ D KEN++
Sbjct: 370 MQEMEAYKQKKDEEAMNLKKEEEEMFKLQKQEALQLLKK----KEKTDNMIKKTKENRQK 425
Query: 281 KKEK--DPLKPKHPVTAYFLFSSERRAALLAD----NKNVLEVAKITGEEWKNMTEEQKR 334
KK++ DP KPK P +++ +FS E R L + N + L + +WK ++EE+++
Sbjct: 426 KKQQNVDPNKPKKPASSFLIFSKEARKNLAQERPVINNSTLNA--LISVKWKELSEEERQ 483
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
+ A + E Y +EME Y +
Sbjct: 484 IWNAKAAEAMEIYKKEMEEYNK 505
>gi|224072172|ref|XP_002303636.1| high mobility group family [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa]
Length = 480
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/359 (65%), Positives = 282/359 (78%), Gaps = 22/359 (6%)
Query: 1 MASSDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHES 60
MA + VAS P K +R+ALK KN NE+ +MAQ S E+
Sbjct: 1 MADTAVASTV--PKKSRNNRKALKQKNPSTNESNIMAQKLS-----------------ET 41
Query: 61 LSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKE 120
+ K + KAKQ + + F+KD QEMQEML+++KLEKEKTE LLKEKD+MLK K+
Sbjct: 42 STATKGKSKAAKAKQNKEASASLFEKDFQEMQEMLQQLKLEKEKTEVLLKEKDDMLKAKD 101
Query: 121 EELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCA-ERKRPSPP 179
EE+E++GKEQ+K+ MELKKLQK+KEFKP MTL VQ + DK+QD+KKK E KRP PP
Sbjct: 102 EEIEMKGKEQQKMKMELKKLQKLKEFKPTMTLSFVQAMNDKQQDKKKKKGGNEIKRPCPP 161
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y LWCK QWNE KKENP+AEFK+I+NILGAKWK ++AEEKKPYEEKYQAEKEAYL+VM K
Sbjct: 162 YSLWCKAQWNEVKKENPDAEFKDISNILGAKWKTITAEEKKPYEEKYQAEKEAYLKVMTK 221
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKE--NKKPKKEKDPLKPKHPVTAYF 297
E+RESEAMKLLEEE KQKTAMELLEQYLQFKQEAD+E +KK KKEKDPLKPK P++A+F
Sbjct: 222 EKRESEAMKLLEEEQKQKTAMELLEQYLQFKQEADQEENSKKTKKEKDPLKPKQPLSAFF 281
Query: 298 LFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
LF +ERRAALLA+NK+VLEVAKI GEEWKNMTE+++ PYEE+AKKN+EKY +EMEAYK+
Sbjct: 282 LFCNERRAALLAENKSVLEVAKIAGEEWKNMTEKRRGPYEEVAKKNREKYMQEMEAYKQ 340
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 17/199 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P + L+C ++ EN E+ I G +WKN++ + + PYEE + +E Y
Sbjct: 274 KQPLSAFFLFCNERRAALLAENKSV--LEVAKIAGEEWKNMTEKRRGPYEEVAKKNREKY 331
Query: 234 LQVM--AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN----------KKPK 281
+Q M K+ ++ EAM L +EE + ++ E + K++ EN KK +
Sbjct: 332 MQEMEAYKQTKDEEAMNLKKEEE-ELVKVQKQEAWQLLKKKEKTENIIKKTKEQRQKKQQ 390
Query: 282 KEKDPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
+ DP KPK P +++ LFS E R +L+ + N + + +WK + EE+++ +
Sbjct: 391 QNVDPNKPKKPASSFLLFSKETRKSLMDERPGINNSTLTAMISVKWKELNEEERQIWNSK 450
Query: 340 AKKNKEKYNEEMEAYKRRM 358
A + E Y +E+E Y + +
Sbjct: 451 AAEAMEAYKKELEEYSKSL 469
>gi|147777965|emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]
Length = 532
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 250/384 (65%), Positives = 290/384 (75%), Gaps = 37/384 (9%)
Query: 9 MAVEPSKKPR-SRRALKPKNSLANEAVVMA-QTPSQSPIP-NPPDAGLSKENHESLSQP- 64
MAV P KK R SR+ALK K+S N+A ++A Q SP P P KENHESLSQP
Sbjct: 10 MAV-PIKKARTSRKALKEKSSSTNKANILAGQISESSPAPVXTPXEDAXKENHESLSQPL 68
Query: 65 -KKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEEL 123
K KG K K+ SF++DLQEMQE L +++LEKEKTE LLK +DEMLK+KEEEL
Sbjct: 69 SGKKKXKGAQKGKKSKESQSFERDLQEMQEKLXQLRLEKEKTEGLLKARDEMLKIKEEEL 128
Query: 124 ELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKK---GCAERKRPSPPY 180
E +G+EQEKL MELKKLQK+KEFKP T P+ L+DKEQ++K+K GC E KRPSP Y
Sbjct: 129 ETRGREQEKLQMELKKLQKLKEFKPTXTFPL-HSLRDKEQEKKEKNKKGCPETKRPSPSY 187
Query: 181 ILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKE 240
+LWCKDQWNEAKK NP+A+FKEI+NILG KWK +SAEEKKPYEEKYQAEKEAYLQ++ KE
Sbjct: 188 VLWCKDQWNEAKKANPDADFKEISNILGTKWKTISAEEKKPYEEKYQAEKEAYLQIVGKE 247
Query: 241 RRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFS 300
+RE+EAM+LLEEE KQKTAMELLEQYLQFKQEA+KENKK KKEKDPLKPKHPV+A+FLFS
Sbjct: 248 KRENEAMRLLEEEQKQKTAMELLEQYLQFKQEAEKENKKKKKEKDPLKPKHPVSAFFLFS 307
Query: 301 SERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEE---------------------- 338
ERRAALL +BKNVLE+AKI GEEWKNMTE+QKRPYEE
Sbjct: 308 KERRAALLXEBKNVLEIAKIAGEEWKNMTEKQKRPYEEVHLMTSLFLSLFLSAAWSLTIS 367
Query: 339 -----IAKKNKEKYNEEMEAYKRR 357
I KKNK KY EEME YK++
Sbjct: 368 IENLQIXKKNKAKYQEEMELYKQQ 391
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 54/230 (23%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE---------- 224
P + L+ K++ EB EI I G +WKN++ ++K+PYEE
Sbjct: 298 HPVSAFFLFSKERRAALLXEBKNV--LEIAKIAGEEWKNMTEKQKRPYEEVHLMTSLFLS 355
Query: 225 ------------------------KYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAM 260
KYQ E E Y Q ++ E+E +K EEE +
Sbjct: 356 LFLSAAWSLTISIENLQIXKKNKAKYQEEMELYKQ---QKDEEAEBLKKGEEEQMKIQKH 412
Query: 261 ELLEQYLQFKQEADKENKKPKKEK------------DPLKPKHPVTAYFLFSSERRAALL 308
E L Q L+ K++ + KK K+ + DP KPK P +++ LFS E R + L
Sbjct: 413 EAL-QLLKKKEKTENIIKKTKENRQKKKKQKEKANSDPNKPKKPASSFLLFSKEARRSFL 471
Query: 309 AD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
+ N + + +WK + E++++ + + AK+ E Y +E+E Y +
Sbjct: 472 QERPGINNSTLNALISVKWKELDEQERKIWNDKAKEAMEAYQKELEEYNK 521
>gi|356523471|ref|XP_003530362.1| PREDICTED: high mobility group B protein 13-like isoform 1 [Glycine
max]
Length = 478
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/357 (64%), Positives = 279/357 (78%), Gaps = 22/357 (6%)
Query: 1 MASSDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHES 60
M + VA + P+K+ R RRALK K N+A ++ TP SP
Sbjct: 1 MGGTVVAEV---PTKRGRGRRALKEKTPSTNDANIIIATPI-SP---------------- 40
Query: 61 LSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKE 120
S K A K+ K+ SF+K+L EMQEML++M+LEKEKTEELLK KDE LK+KE
Sbjct: 41 -SSEKAAQVVPSKKKQDSKKQQSFEKELLEMQEMLQQMRLEKEKTEELLKVKDEALKLKE 99
Query: 121 EELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPY 180
EELE +G+EQEKL ELKKLQK+KEFKP M LP+++ ++++D+KKKGC+E+KRPSPPY
Sbjct: 100 EELENRGREQEKLQTELKKLQKLKEFKPTMNLPVLKD-NEEKKDKKKKGCSEKKRPSPPY 158
Query: 181 ILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKE 240
ILW KDQWNE KK NPEAEFKEI+ +LGAKWK VSAEEKKPYE Y AEKEAYLQV+AKE
Sbjct: 159 ILWMKDQWNEIKKANPEAEFKEISTMLGAKWKTVSAEEKKPYEGIYHAEKEAYLQVIAKE 218
Query: 241 RRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFS 300
+RE+EAM+LLE+E KQ+TAMELLEQY+QFKQEA+K+ KK KKEKDPLKPKHP++AYFLF+
Sbjct: 219 KRETEAMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPMSAYFLFT 278
Query: 301 SERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
++RRAAL A+NKN LEV KIT EEWKNMTEEQKRPYEE+AKKNKE+Y EMEAYK++
Sbjct: 279 NDRRAALAAENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKEQYALEMEAYKQK 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P Y L+ D+ EN F E+ I +WKN++ E+K+PYEE + KE Y
Sbjct: 268 KHPMSAYFLFTNDRRAALAAEN--KNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKEQY 325
Query: 234 LQVM--AKERRESEAMKLLEEEHKQ-----KTAMELLEQYLQFKQEADKENKKPKKEK-- 284
M K++++ EA ++EE +Q + A++LL++ K++ + KK K+ +
Sbjct: 326 ALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLLKK----KEKTENIIKKTKQNRQK 381
Query: 285 ----------DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQ 332
DP +PK P +++ LFS E R L + + + + +WK ++EE
Sbjct: 382 KKQNKDDKNSDPNRPKKPASSFILFSKEARKTLQEERPGISTSTLNALVSLKWKELSEED 441
Query: 333 KRPYEEIAKKNKEKYNEEMEAYKRRM 358
++ + A K + Y +E+E Y + +
Sbjct: 442 RQFWNGQASKAMDAYKKELEEYNKSL 467
>gi|356523473|ref|XP_003530363.1| PREDICTED: high mobility group B protein 13-like isoform 2 [Glycine
max]
Length = 467
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/357 (64%), Positives = 279/357 (78%), Gaps = 22/357 (6%)
Query: 1 MASSDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHES 60
M + VA + P+K+ R RRALK K N+A ++ TP SP
Sbjct: 1 MGGTVVAEV---PTKRGRGRRALKEKTPSTNDANIIIATPI-SP---------------- 40
Query: 61 LSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKE 120
S K A K+ K+ SF+K+L EMQEML++M+LEKEKTEELLK KDE LK+KE
Sbjct: 41 -SSEKAAQVVPSKKKQDSKKQQSFEKELLEMQEMLQQMRLEKEKTEELLKVKDEALKLKE 99
Query: 121 EELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPY 180
EELE +G+EQEKL ELKKLQK+KEFKP M LP+++ ++++D+KKKGC+E+KRPSPPY
Sbjct: 100 EELENRGREQEKLQTELKKLQKLKEFKPTMNLPVLKD-NEEKKDKKKKGCSEKKRPSPPY 158
Query: 181 ILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKE 240
ILW KDQWNE KK NPEAEFKEI+ +LGAKWK VSAEEKKPYE Y AEKEAYLQV+AKE
Sbjct: 159 ILWMKDQWNEIKKANPEAEFKEISTMLGAKWKTVSAEEKKPYEGIYHAEKEAYLQVIAKE 218
Query: 241 RRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFS 300
+RE+EAM+LLE+E KQ+TAMELLEQY+QFKQEA+K+ KK KKEKDPLKPKHP++AYFLF+
Sbjct: 219 KRETEAMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPMSAYFLFT 278
Query: 301 SERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
++RRAAL A+NKN LEV KIT EEWKNMTEEQKRPYEE+AKKNKE+Y EMEAYK++
Sbjct: 279 NDRRAALAAENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKEQYALEMEAYKQK 335
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 20/197 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P Y L+ D+ EN F E+ I +WKN++ E+K+PYEE + KE Y
Sbjct: 268 KHPMSAYFLFTNDRRAALAAEN--KNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKEQY 325
Query: 234 LQVM--AKERRESEAMKLLEEEHKQ-----KTAMELLEQYLQFKQEADKEN---KKPKKE 283
M K++++ EA ++EE +Q + A++LL K++ EN K K
Sbjct: 326 ALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLL------KKKEKTENIIKNKDDKN 379
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP +PK P +++ LFS E R L + + + + +WK ++EE ++ + A
Sbjct: 380 SDPNRPKKPASSFILFSKEARKTLQEERPGISTSTLNALVSLKWKELSEEDRQFWNGQAS 439
Query: 342 KNKEKYNEEMEAYKRRM 358
K + Y +E+E Y + +
Sbjct: 440 KAMDAYKKELEEYNKSL 456
>gi|449505047|ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
13-like [Cucumis sativus]
Length = 500
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/359 (66%), Positives = 284/359 (79%), Gaps = 14/359 (3%)
Query: 6 VASMAVEPSKKPR-SRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQ- 63
V P+KKPR SR+ALK KNS + + Q+ S P P G E LSQ
Sbjct: 11 VTGAPAGPTKKPRNSRKALKDKNS----SPEVPQSQSMVPKVTAPSEG------EILSQN 60
Query: 64 -PKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEE 122
K KA + + SFDKDLQEMQ+ML+++KL+KEKTEELLKEKDEMLK K+EE
Sbjct: 61 QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
Query: 123 LELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERK-RPSPPYI 181
L+ + KEQEKL +ELKKLQK+KEFKP M P++Q KDKEQD+K+K K RP+PPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
Query: 182 LWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKER 241
LWCKDQWNE KKENPEA+FKE +NILGAKWK +SAEEKKPYEEKYQAEKE YL++ +KE+
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
Query: 242 RESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSS 301
RESEAMKLLEEE KQKTAMELLEQYLQFK+EA+KENKK KKEKDPLKPK P++A+FLFS+
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
Query: 302 ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
ERRA+L+A+NKNV+E+AKI GEEWKNMTEEQK PYEE+AKKNKEKY +EME Y+++ +E
Sbjct: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEE 359
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 22/179 (12%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEHKQKTA 259
E+ I G +WKN++ E+K PYEE + KE Y+Q M ++++E EA L +EE +Q
Sbjct: 315 ELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKKEEEEQMKV 374
Query: 260 ME---------------LLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERR 304
+ ++++ + +Q+ KE K P DP KPK P ++Y LFS E R
Sbjct: 375 QKHEALLLLKKKXKTETIIKKSKEERQKKKKEGKNP---VDPNKPKKPASSYILFSKEAR 431
Query: 305 AALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKEL 361
+++ + V V + +WK ++EE+++ + + A + E Y +E+E Y + + E+
Sbjct: 432 KSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKSVAEM 490
>gi|449464074|ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus]
Length = 500
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/359 (66%), Positives = 284/359 (79%), Gaps = 14/359 (3%)
Query: 6 VASMAVEPSKKPR-SRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQ- 63
V P+KKPR SR+ALK KNS + + Q+ S P P G E LSQ
Sbjct: 11 VTGAPAGPTKKPRNSRKALKDKNS----SPEVPQSQSMVPKVTAPSEG------EILSQN 60
Query: 64 -PKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEE 122
K KA + + SFDKDLQEMQ+ML+++KL+KEKTEELLKEKDEMLK K+EE
Sbjct: 61 QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
Query: 123 LELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERK-RPSPPYI 181
L+ + KEQEKL +ELKKLQK+KEFKP M P++Q KDKEQD+K+K K RP+PPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
Query: 182 LWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKER 241
LWCKDQWNE KKENPEA+FKE +NILGAKWK +SAEEKKPYEEKYQAEKE YL++ +KE+
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
Query: 242 RESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSS 301
RESEAMKLLEEE KQKTAMELLEQYLQFK+EA+KENKK KKEKDPLKPK P++A+FLFS+
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
Query: 302 ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
ERRA+L+A+NKNV+E+AKI GEEWKNMTEEQK PYEE+AKKNKEKY +EME Y+++ +E
Sbjct: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEE 359
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 22/179 (12%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEHKQ--- 256
E+ I G +WKN++ E+K PYEE + KE Y+Q M ++++E EA L +EE +Q
Sbjct: 315 ELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKKEEEEQMKV 374
Query: 257 ------------KTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERR 304
+ ++++ + +Q+ KE K P DP KPK P ++Y LFS E R
Sbjct: 375 QKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNP---VDPNKPKKPASSYILFSKEAR 431
Query: 305 AALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKEL 361
+++ + V V + +WK ++EE+++ + + A + E Y +E+E Y + + E+
Sbjct: 432 KSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKSVAEM 490
>gi|255637700|gb|ACU19173.1| unknown [Glycine max]
Length = 478
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/357 (63%), Positives = 276/357 (77%), Gaps = 22/357 (6%)
Query: 1 MASSDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHES 60
M + VA + P+K+ R RRALK K N+A ++ TP SP
Sbjct: 1 MGGTVVAEV---PTKRGRGRRALKEKTPSTNDANIIIATPI-SP---------------- 40
Query: 61 LSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKE 120
S K A K+ K+ SF+K+L EMQEML++M+LEKEKTEELLK KDE LK+KE
Sbjct: 41 -SSEKAAQVVPSKKKQDSKKQQSFEKELLEMQEMLQQMRLEKEKTEELLKVKDEALKLKE 99
Query: 121 EELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPY 180
EELE +G+EQEKL ELKKLQK+KEFKP M L +V ++++D+KKKGC+E+KR SPPY
Sbjct: 100 EELENRGREQEKLQTELKKLQKLKEFKPTMNL-LVLKDNEEKKDKKKKGCSEKKRSSPPY 158
Query: 181 ILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKE 240
ILW KDQWNE KK NPEAEFKEI+ +LGAKWK VSAEEKKPYE Y AEKEAYLQV+AKE
Sbjct: 159 ILWMKDQWNEIKKANPEAEFKEISTMLGAKWKTVSAEEKKPYEGIYHAEKEAYLQVIAKE 218
Query: 241 RRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFS 300
+RE+EAM+LLE+E KQ+TAMELLEQY+QFKQEA+K+ KK KKEKDPL+P+HP++AYFLF+
Sbjct: 219 KRETEAMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLRPRHPMSAYFLFT 278
Query: 301 SERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
++RRAAL A+NKN LEV KIT EEWKNMTEEQKRPYEE+AKKNKE+Y EMEAYK++
Sbjct: 279 NDRRAALAAENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKEQYALEMEAYKQK 335
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+ P Y L+ D+ EN F E+ I +WKN++ E+K+PYEE + KE Y
Sbjct: 268 RHPMSAYFLFTNDRRAALAAEN--KNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKEQY 325
Query: 234 LQVM--AKERRESEAMKLLEEEHKQ-----KTAMELLEQYLQFKQEADKENKKPKKEK-- 284
M K++++ EA ++EE +Q + A++LL++ K++ + KK K+ +
Sbjct: 326 ALEMEAYKQKKDEEAAHFMKEEEEQMKLQKQEALQLLKK----KEKTENIIKKTKQNRQK 381
Query: 285 ----------DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQ 332
DP +PK P +++ L S E R L + + + + +WK ++EE
Sbjct: 382 KKQNKDDKNSDPNRPKKPASSFILLSKEARKTLQEERPGISTSTLNALVSLKWKELSEED 441
Query: 333 KRPYEEIAKKNKEKYNEEMEAYKRRM 358
++ + A K + Y +E+E Y + +
Sbjct: 442 RQFWNGQASKAMDAYKKELEEYNKSL 467
>gi|356513291|ref|XP_003525347.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 473
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 224/357 (62%), Positives = 276/357 (77%), Gaps = 24/357 (6%)
Query: 1 MASSDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHES 60
M + VA + P+K+ R RRALK K N+A ++ TP
Sbjct: 1 MGDTVVAEV---PAKRGRGRRALKEKTPSTNDANIIIATP-------------------- 37
Query: 61 LSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKE 120
+S A K+ K+ SF+K+L EMQEML++M+LEKEKTEELLK KDE LK K+
Sbjct: 38 ISPSSDKAQVPSKKKQDSKKQQSFEKELLEMQEMLQQMRLEKEKTEELLKLKDEALKQKD 97
Query: 121 EELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPY 180
EEL+ +G+EQEKL ELKKLQK+KEFKP M LP+++ ++++D+KKKGC+E+KRPSPPY
Sbjct: 98 EELKNRGREQEKLQTELKKLQKLKEFKPTMNLPVLKD-NEEKKDKKKKGCSEKKRPSPPY 156
Query: 181 ILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKE 240
ILW KDQWNE KK N EAEFKEI+ +LG+KWK V+AEEKKPYEE Y AEKEAYLQ++AKE
Sbjct: 157 ILWMKDQWNEIKKANSEAEFKEISTMLGSKWKTVTAEEKKPYEEIYHAEKEAYLQMIAKE 216
Query: 241 RRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFS 300
+RE+EAM+LLE+E KQKTAMELLEQY+QFKQEA+KE KK KKEKDPLKPKHP++AYFLF+
Sbjct: 217 KRETEAMRLLEDEQKQKTAMELLEQYMQFKQEAEKEGKKNKKEKDPLKPKHPMSAYFLFT 276
Query: 301 SERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
++RRAAL+A+NKN LEV KIT EEWKNMTEEQKRPYEE+AKKNKEKY EME YK++
Sbjct: 277 NDRRAALVAENKNFLEVPKITAEEWKNMTEEQKRPYEEMAKKNKEKYALEMEVYKQK 333
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P Y L+ D+ EN F E+ I +WKN++ E+K+PYEE + KE Y
Sbjct: 266 KHPMSAYFLFTNDRRAALVAEN--KNFLEVPKITAEEWKNMTEEQKRPYEEMAKKNKEKY 323
Query: 234 LQVM--AKERRESEAMKLL--EEEH---KQKTAMELLE-----QYLQFKQEADKENKKPK 281
M K++++ EA + EEEH +++ A++LL+ + + K + K+ K
Sbjct: 324 ALEMEVYKQKKDEEAAHFMKEEEEHMKLQKQEALQLLKKKEKTENIIKKTKQKKKQNKDD 383
Query: 282 KEKDPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
K DP +PK P +++ LFS E + L + N + + +WK ++ E ++ +
Sbjct: 384 KNSDPNRPKKPASSFILFSKEAKKTLHEERPGINTSTLNALVSLKWKELSVEDRQFWNGQ 443
Query: 340 AKKNKEKYNEEMEAYKRRM 358
A K + Y +E+E Y + +
Sbjct: 444 ASKAMDAYKKELEEYNKSI 462
>gi|334186863|ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 450
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 211/351 (60%), Positives = 263/351 (74%), Gaps = 44/351 (12%)
Query: 13 PSKKPR-SRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQPKKAAAKG 71
P+KKPR SR+ALK KN L +TP P+P + KG
Sbjct: 9 PTKKPRNSRKALKQKNELV-------ETP-----PSP------------------VSVKG 38
Query: 72 KAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQE 131
K+ + SF++DL EMQ MLEKMK+EK+KTEELLKEKDE+L+ KEEELE + EQE
Sbjct: 39 KSAK-------SFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQE 91
Query: 132 KLHMELKKLQKMKEFKPNMTL-----PIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKD 186
KL +ELKKLQKMKEFKPNMT + Q ++K +KKK C E KRPS Y+LWCKD
Sbjct: 92 KLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKD 151
Query: 187 QWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEA 246
QW E KKENPEA+FKE +NILGAKWK++SAE+KKPYEE+YQ EKEAYLQV+AKE+RE EA
Sbjct: 152 QWTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEA 211
Query: 247 MKLLEEEHKQKTAMELLEQYLQFKQEADKE-NKKPKKEKDPLKPKHPVTAYFLFSSERRA 305
MKLLE++ KQ+TAMELL+QYL F QEA+++ KK KKEKDPLKPKHPV+A+ ++++ERRA
Sbjct: 212 MKLLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRA 271
Query: 306 ALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
AL +NK+V+EVAKITGEEWKN+++++K PYE++AKKNKE Y + ME YKR
Sbjct: 272 ALREENKSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKR 322
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P ++++ ++ ++EN E+ I G +WKN+S ++K PYE+ + KE Y
Sbjct: 256 KHPVSAFLVYANERRAALREEN--KSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETY 313
Query: 234 LQVMAKERRESEAMKLLE--------EEHKQKTAMELLEQYLQFKQEADKENKKPKKEK- 284
LQ M + +R E L + + HKQ+ Q L+ K++ D KK K E
Sbjct: 314 LQAMEEYKRTKEEEALSQKKEEEELLKLHKQEAL-----QMLKKKEKTDNLIKKKKNENV 368
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP KPK P ++YFLFS + R L + N V + +WK ++EE+K+ Y A K
Sbjct: 369 DPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAK 428
Query: 343 NKEKYNEEMEAYKRR 357
E Y +E+EAY ++
Sbjct: 429 LMEAYKKEVEAYNKK 443
>gi|15236607|ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis thaliana]
gi|7269229|emb|CAB81298.1| 98b like protein [Arabidopsis thaliana]
gi|18377799|gb|AAL67049.1| putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein [Arabidopsis thaliana]
gi|22022506|gb|AAM83212.1| putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 456
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 211/351 (60%), Positives = 263/351 (74%), Gaps = 44/351 (12%)
Query: 13 PSKKPR-SRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQPKKAAAKG 71
P+KKPR SR+ALK KN L +TP P+P + KG
Sbjct: 9 PTKKPRNSRKALKQKNELV-------ETP-----PSP------------------VSVKG 38
Query: 72 KAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQE 131
K+ + SF++DL EMQ MLEKMK+EK+KTEELLKEKDE+L+ KEEELE + EQE
Sbjct: 39 KSAK-------SFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQE 91
Query: 132 KLHMELKKLQKMKEFKPNMTL-----PIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKD 186
KL +ELKKLQKMKEFKPNMT + Q ++K +KKK C E KRPS Y+LWCKD
Sbjct: 92 KLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKD 151
Query: 187 QWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEA 246
QW E KKENPEA+FKE +NILGAKWK++SAE+KKPYEE+YQ EKEAYLQV+AKE+RE EA
Sbjct: 152 QWTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEA 211
Query: 247 MKLLEEEHKQKTAMELLEQYLQFKQEADKE-NKKPKKEKDPLKPKHPVTAYFLFSSERRA 305
MKLLE++ KQ+TAMELL+QYL F QEA+++ KK KKEKDPLKPKHPV+A+ ++++ERRA
Sbjct: 212 MKLLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRA 271
Query: 306 ALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
AL +NK+V+EVAKITGEEWKN+++++K PYE++AKKNKE Y + ME YKR
Sbjct: 272 ALREENKSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKR 322
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P ++++ ++ ++EN E+ I G +WKN+S ++K PYE+ + KE Y
Sbjct: 256 KHPVSAFLVYANERRAALREEN--KSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETY 313
Query: 234 LQVMAKERRESEAMKLLE--------EEHKQKTAMELL---EQYLQFKQEADKENKKPKK 282
LQ M + +R E L + + HKQ+ A+++L E+ ++ KK +
Sbjct: 314 LQAMEEYKRTKEEEALSQKKEEEELLKLHKQE-ALQMLKKKEKTDNLIKKEKATKKKKNE 372
Query: 283 EKDPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KPK P ++YFLFS + R L + N V + +WK ++EE+K+ Y A
Sbjct: 373 NVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKA 432
Query: 341 KKNKEKYNEEMEAYKRR 357
K E Y +E+EAY ++
Sbjct: 433 AKLMEAYKKEVEAYNKK 449
>gi|186701221|gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 212/351 (60%), Positives = 260/351 (74%), Gaps = 44/351 (12%)
Query: 13 PSKKPR-SRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQPKKAAAKG 71
P+KKPR SR+ALK KN L +TP P+P
Sbjct: 9 PTKKPRNSRKALKQKNELV-------ETP-----PSPVSV-------------------- 36
Query: 72 KAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQE 131
KAK A SF++DL EMQ MLEKMK+EK+KTEELLKEKDE+L+ KEEELE + EQE
Sbjct: 37 KAKSAK-----SFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQE 91
Query: 132 KLHMELKKLQKMKEFKPNMTL-----PIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKD 186
KL +ELKKLQKMKEFKPNMT + Q ++K +KKK C E KRPS Y+LWCKD
Sbjct: 92 KLKVELKKLQKMKEFKPNMTFACGQPSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKD 151
Query: 187 QWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEA 246
QW E KK+NPEA+FKE +NILG KWK++SAE+KKPYEEKYQ EKEAYLQV+AK++RE EA
Sbjct: 152 QWAEVKKQNPEADFKETSNILGTKWKSLSAEDKKPYEEKYQVEKEAYLQVIAKQKREKEA 211
Query: 247 MKLLEEEHKQKTAMELLEQYLQFKQEADKE-NKKPKKEKDPLKPKHPVTAYFLFSSERRA 305
MKLLE++ KQKTAMELL+QYL F QEA+++ KK KKEKDPLKPKHPV+A+ ++++ERRA
Sbjct: 212 MKLLEDDQKQKTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRA 271
Query: 306 ALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
AL D+K+V+EVAKITGEEWKN+++++K PYEE+AKKNKE Y + ME YKR
Sbjct: 272 ALREDSKSVVEVAKITGEEWKNLSDKKKAPYEEVAKKNKETYLQAMEEYKR 322
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERR--ESEAM------KLLEEE 253
E+ I G +WKN+S ++K PYEE + KE YLQ M + +R E EA+ + L +
Sbjct: 282 EVAKITGEEWKNLSDKKKAPYEEVAKKNKETYLQAMEEYKRTKEEEALSQKKEEEELLKL 341
Query: 254 HKQKTAMELL---EQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLAD 310
HKQ+ A++LL E+ ++ KK + DP KPK P ++YFLFS + R L+ +
Sbjct: 342 HKQE-ALQLLKKKEKTDNLIKKEKATKKKKNENIDPNKPKKPASSYFLFSKDERKRLIEE 400
Query: 311 --NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
N V + +WK + EE+K+ Y + A K E Y +E+EAY ++
Sbjct: 401 RPGTNNSTVTALISVKWKELGEEEKQVYNKKAAKLMEAYKKEVEAYNKK 449
>gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana]
gi|46367464|emb|CAG25858.1| hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 210/358 (58%), Positives = 256/358 (71%), Gaps = 47/358 (13%)
Query: 4 SDVASMAVEPSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQ 63
S V+S K SR+ALK KN ++ +P SP+
Sbjct: 2 STVSSDPAHAKKSRNSRKALKQKNE------IVESSPLLSPV------------------ 37
Query: 64 PKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEEL 123
+ KG K+ SF+KDL EMQ MLEKMK+EKEKTE+LLKEKDE+L+ KE
Sbjct: 38 ----SGKG-------KESKSFEKDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKKE--- 83
Query: 124 ELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCL----KDKEQDRKKKGCAERKRPSPP 179
EQEKL ELKKLQKMKEFKPNMT Q L ++K+ +KKK CAE KRPS P
Sbjct: 84 ----VEQEKLKTELKKLQKMKEFKPNMTFAFSQSLAQTEEEKKGKKKKKDCAEIKRPSTP 139
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
YILWCKD WNE KK+NP+A+FKE +NILGAKWK +SAEEKKPYEEKYQA+KEAYLQV+ K
Sbjct: 140 YILWCKDNWNEVKKQNPDADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITK 199
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN-KKPKKEKDPLKPKHPVTAYFL 298
E+RE EAMKLL++E KQKTAMELL+QYL F QE +++N KK KK KDPLKPK P++AY +
Sbjct: 200 EKREREAMKLLDDEQKQKTAMELLDQYLHFVQEGEQDNKKKAKKIKDPLKPKQPISAYLI 259
Query: 299 FSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
+++ERRAAL +NK+V+EVAKITGEEWKN++EEQK PY+++AKKNKE Y +EME YKR
Sbjct: 260 YANERRAALKGENKSVIEVAKITGEEWKNLSEEQKAPYDKMAKKNKEIYLQEMEGYKR 317
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 22/200 (11%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+++ ++ K EN E+ I G +WKN+S E+K PY++ + KE Y
Sbjct: 251 KQPISAYLIYANERRAALKGENKSV--IEVAKITGEEWKNLSEEQKAPYDKMAKKNKEIY 308
Query: 234 LQVMAKERR--ESEAMKLLEEE------HKQKTAMELL------EQYLQFKQEADKENKK 279
LQ M +R E EAM +EE HKQ+ A++LL + ++ +E K NKK
Sbjct: 309 LQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQE-ALQLLKKKEKTDNIIKKTKETAK-NKK 366
Query: 280 PKKEKDPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPY 336
+ DP KPK P ++YFLF + R ++L ++ N A IT +W + EE+K+ Y
Sbjct: 367 KNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHITL-KWMELGEEEKQVY 425
Query: 337 EEIAKKNKEKYNEEMEAYKR 356
A E Y +E+E Y +
Sbjct: 426 NSKAAALMEAYKKEVEEYNK 445
>gi|15237042|ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis thaliana]
gi|7267807|emb|CAB81209.1| 98b like protein [Arabidopsis thaliana]
gi|22136604|gb|AAM91621.1| putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 446
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 193/283 (68%), Positives = 232/283 (81%), Gaps = 12/283 (4%)
Query: 79 KQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLHMELK 138
K+ SF+KDL EMQ MLEKMK+EKEKTE+LLKEKDE+L+ KE EQEKL ELK
Sbjct: 38 KETKSFEKDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKKE-------VEQEKLKTELK 90
Query: 139 KLQKMKEFKPNMTLPIVQCL----KDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKE 194
KLQKMKEFKPNMT Q L ++K+ +KKK CAE KRPS PYILWCKD WNE KK+
Sbjct: 91 KLQKMKEFKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYILWCKDNWNEVKKQ 150
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
NPEA+FKE +NILGAKWK +SAEEKKPYEEKYQA+KEAYLQV+ KE+RE EAMKLL++E
Sbjct: 151 NPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMKLLDDEQ 210
Query: 255 KQKTAMELLEQYLQFKQEADKEN-KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN 313
KQKTAMELL+QYL F QEA+ +N KK KK KDPLKPK P++AY ++++ERRAAL +NK+
Sbjct: 211 KQKTAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKGENKS 270
Query: 314 VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
V+EVAK+ GEEWKN++EE+K PY+++AKKNKE Y +EME YKR
Sbjct: 271 VIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKR 313
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 22/200 (11%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+++ ++ K EN E+ + G +WKN+S E+K PY++ + KE Y
Sbjct: 247 KQPISAYLIYANERRAALKGENKSV--IEVAKMAGEEWKNLSEEKKAPYDQMAKKNKEIY 304
Query: 234 LQVMAKERR--ESEAMKLLEEE------HKQKTAMELL------EQYLQFKQEADKENKK 279
LQ M +R E EAM +EE HKQ+ A++LL + ++ +E K NKK
Sbjct: 305 LQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQE-ALQLLKKKEKTDNIIKKTKETAK-NKK 362
Query: 280 PKKEKDPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPY 336
+ DP KPK P ++YFLF + R ++L ++ N A I+ +W + EE+K+ Y
Sbjct: 363 KNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISL-KWMELGEEEKQVY 421
Query: 337 EEIAKKNKEKYNEEMEAYKR 356
A + E Y +E+E Y +
Sbjct: 422 NSKAAELMEAYKKEVEEYNK 441
>gi|3551257|dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 207/349 (59%), Positives = 263/349 (75%), Gaps = 11/349 (3%)
Query: 13 PSKKPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQPKKAAAKGK 72
P+KK RSR+ALKPK +NE ++ P+P + + K ES + + K
Sbjct: 17 PTKKGRSRKALKPKTPSSNETNIL-------PVPVSQASPVKKAMTESTGKENEKKKTKK 69
Query: 73 AKQATKK-QDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQE 131
K Q+ F+K +EMQ+ LE+M LEK KTEE+LKE++E L+ KEEELE +G+EQE
Sbjct: 70 KAAKEAKPQEGDFEKMFEEMQKKLEQMTLEKAKTEEMLKEREEALRRKEEELETRGREQE 129
Query: 132 KLHMELKKLQKMKEFKPNMTLPIVQC--LKDKEQDRKKKGCAERKRPSPPYILWCKDQWN 189
KL +E+KKL KMKEFKP + P+VQ K+ + KKK C E+K+PSPPY LW KDQW
Sbjct: 130 KLQIEIKKLGKMKEFKPTVNFPLVQAPKEKELGKKEKKKVCPEKKKPSPPYALWLKDQWT 189
Query: 190 EAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKL 249
E KKENP+AEFKEI+ +L AKWK V+AEEKKPYEEKYQAEKEAYL+++ E+RE+EAMKL
Sbjct: 190 EVKKENPDAEFKEISTMLAAKWKTVTAEEKKPYEEKYQAEKEAYLKIVGAEKRENEAMKL 249
Query: 250 LEEEHKQKTAMELLEQYLQFKQE-ADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALL 308
LEEE KQ+TAMELLEQY+QFK+E + + KK KKEKDPLKPKHPV+A+FLF +ERRA L+
Sbjct: 250 LEEEQKQRTAMELLEQYMQFKEETENDKKKKTKKEKDPLKPKHPVSAFFLFMNERRADLV 309
Query: 309 ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
A+ KNVLEV KITGEEWKNMTE++K PYEE+AKKNK +Y ++ME YK++
Sbjct: 310 AEKKNVLEVGKITGEEWKNMTEKEKAPYEEMAKKNKNQYLQQMEVYKKK 358
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 16/171 (9%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEH----- 254
E+ I G +WKN++ +EK PYEE + K YLQ M K++++ EA L +EE
Sbjct: 317 EVGKITGEEWKNMTEKEKAPYEEMAKKNKNQYLQQMEVYKKKKDEEAASLQKEEEELSKI 376
Query: 255 KQKTAMELLEQ-------YLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+++ AM+LL++ + K+E K+ K KK DP KPK P +++ LFS E R +
Sbjct: 377 QKQEAMQLLKKKEKTENLIKKTKEERQKKQKGEKKIVDPNKPKRPASSFLLFSKEARKTI 436
Query: 308 LADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
+ + + + +WK ++ E+K+ + E A E Y +EME Y +
Sbjct: 437 SEERPGINNSTLNALISVKWKEISHEEKQLWNEKAAGAMEAYKKEMEEYNK 487
>gi|359472717|ref|XP_003631191.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
6-like [Vitis vinifera]
Length = 502
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/280 (71%), Positives = 242/280 (86%), Gaps = 5/280 (1%)
Query: 82 TSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLHMELKKLQ 141
SF++DLQEMQE LE+++LEKEKTEELLK +DEMLK+KEEELE +G+EQEKL MELKKLQ
Sbjct: 138 ISFERDLQEMQEKLEQLRLEKEKTEELLKARDEMLKIKEEELETRGREQEKLQMELKKLQ 197
Query: 142 KMKEFKPNMTLPIVQCLKDKEQDRKK----KGCAERKRPSPPYILWCKDQWNEAKKENPE 197
K+K+FKP +T P+ L+DKEQ++K+ + C E KRPSP Y+L CKDQWNEAKK NP+
Sbjct: 198 KLKKFKPTVTFPL-HSLRDKEQEKKEKNKKRXCPETKRPSPSYVLXCKDQWNEAKKANPD 256
Query: 198 AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQK 257
A+FKEI+ ILGAKWK +S EEKKP EEKYQ EKEAYLQ++ KE+RE+EA++LLEEE KQK
Sbjct: 257 ADFKEISKILGAKWKTISPEEKKPNEEKYQTEKEAYLQIVGKEKRENEALRLLEEEQKQK 316
Query: 258 TAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEV 317
TAMELLEQYLQFKQEA+KENKK K+ +DPLK KHP++ +F FS ERRAALLA++KNVLE+
Sbjct: 317 TAMELLEQYLQFKQEAEKENKKXKEREDPLKLKHPISTFFXFSKERRAALLAEDKNVLEI 376
Query: 318 AKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
KI GEEWKNMTE+QKRPYEEIAKKNK KY EEM+ YK++
Sbjct: 377 TKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQEEMKLYKQQ 416
>gi|297742312|emb|CBI34461.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/246 (78%), Positives = 221/246 (89%), Gaps = 4/246 (1%)
Query: 115 MLKMKEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKK---GCA 171
MLK+KEEELE +G+EQEKL MELKKLQK+KEFKP +T P+ L+DKEQ++K+K GC
Sbjct: 1 MLKIKEEELETRGREQEKLQMELKKLQKLKEFKPTVTFPL-HSLRDKEQEKKEKNKKGCP 59
Query: 172 ERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKE 231
E KRPSP Y+LWCKDQWNEAKK NP+A+FKEI+NILGAKWK +SAEEKKPYEEKYQAEKE
Sbjct: 60 ETKRPSPSYVLWCKDQWNEAKKANPDADFKEISNILGAKWKTISAEEKKPYEEKYQAEKE 119
Query: 232 AYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKH 291
AYLQ++ KE+RE+EAM+LLEEE KQKTAMELLEQYLQFKQ A+KENKK KKEKDPLKPKH
Sbjct: 120 AYLQIVGKEKRENEAMRLLEEEQKQKTAMELLEQYLQFKQGAEKENKKKKKEKDPLKPKH 179
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
PV+A+FLFS ERRAALL ++KNVLE+AKI GEEWKNMTE+QKRPYEEIAKKNK KY EEM
Sbjct: 180 PVSAFFLFSKERRAALLGEDKNVLEIAKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQEEM 239
Query: 352 EAYKRR 357
E YK++
Sbjct: 240 ELYKQQ 245
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 25/176 (14%)
Query: 202 EITNILGAKWKNVSAEEKKPYEE-------KYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
EI I G +WKN++ ++K+PYEE KYQ E E Y Q ++ E+E +K EEE
Sbjct: 204 EIAKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQEEMELYKQ---QKDEEAEDLKKGEEEQ 260
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEK------------DPLKPKHPVTAYFLFSSE 302
+ E L Q L+ K++ + KK K+ + DP KPK P +++ LFS E
Sbjct: 261 MKIQKHEAL-QLLKKKEKTENIIKKTKENRQKKKKQKEKANSDPNKPKKPASSFLLFSKE 319
Query: 303 RRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
R + L + N + + +WK + EE+++ + + AK+ E Y +E+E Y +
Sbjct: 320 ARNSFLQERPGINNSTLNALISVKWKELDEEERKIWNDKAKEAMEAYQKELEEYNK 375
>gi|3600053|gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/310 (62%), Positives = 236/310 (76%), Gaps = 16/310 (5%)
Query: 45 IPNPPDAGLSKENHESLSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEK 104
I NP A S+ + ++L Q K + K+ SF+KDL EMQ MLEKMK+EKEK
Sbjct: 17 IKNPAHAKKSRNSRKALKQ-KNEIVESSPVSDKGKETKSFEKDLMEMQAMLEKMKIEKEK 75
Query: 105 TEELLKEKDEMLKMKEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCL----KD 160
TE+LLKEKDE+L+ KE E QEKL ELKKLQKMKEFKPNMT Q L ++
Sbjct: 76 TEDLLKEKDEILRKKEVE-------QEKLKTELKKLQKMKEFKPNMTFAFSQSLAQTEEE 128
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K+ +KKK CAE KRPS PYILWCKD WNE KK+NPEA+FKE +NILGAKWK +SAEEKK
Sbjct: 129 KKGKKKKKDCAETKRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEKK 188
Query: 221 PYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN-KK 279
PYEEKYQA+KEAYLQV+ KE+RE EAMKLL++E KQKTAMELL+QYL F QEA+ +N KK
Sbjct: 189 PYEEKYQADKEAYLQVITKEKREREAMKLLDDEQKQKTAMELLDQYLHFVQEAEHDNKKK 248
Query: 280 PKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KK KDPLKPK P++AY ++++ERRAAL +NK+V+EVAK+ GEEWKN++EE+K PY++
Sbjct: 249 AKKIKDPLKPKQPISAYLIYANERRAALKGENKSVIEVAKMAGEEWKNLSEEKKAPYDQK 308
Query: 340 AK---KNKEK 346
K KNK+K
Sbjct: 309 TKETAKNKKK 318
>gi|357139210|ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
distachyon]
Length = 537
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 238/313 (76%), Gaps = 18/313 (5%)
Query: 60 SLSQPKKAAAK-GKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKM 118
S + K+A++K GK K A S +L E+Q MLE+++LEKEK EE+++E+DE+++
Sbjct: 88 SAQKAKRASSKNGKGKAAAA---PSMADELTELQGMLERLRLEKEKAEEMVRERDEVIRK 144
Query: 119 KEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCL----------KDKEQDRKKK 168
KEEE+E +GK+QE+L ELKK+Q++KEFKP M LP+V+ L K++ K K
Sbjct: 145 KEEEIETKGKQQERLQAELKKMQRVKEFKPTMNLPLVKSLLDKDQDGDDKGKKKKKGKGK 204
Query: 169 GCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQA 228
ERK+P P Y+LWCKDQW E KKEN +A+FKE++N LGAKWK +SAEEK+PYEE+Y+
Sbjct: 205 SGNERKKPCPAYLLWCKDQWAEIKKENSDADFKEVSNALGAKWKTISAEEKQPYEERYRQ 264
Query: 229 EKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN----KKPKKEK 284
EKEAYLQV+ +E+RE+EAMKL EEE + TA ELLEQYL+F+QEAD + KK KKEK
Sbjct: 265 EKEAYLQVVGQEKREAEAMKLFEEEQMRWTAKELLEQYLKFRQEADGSDKKAKKKNKKEK 324
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP KPK P++AYF++S ERRAAL+A+ KNV E+ KITGEEWK+MT+ QK PYEE+A K K
Sbjct: 325 DPSKPKQPMSAYFVYSQERRAALVAEKKNVPEIGKITGEEWKSMTDAQKAPYEEVASKQK 384
Query: 345 EKYNEEMEAYKRR 357
E+Y+++ME YK++
Sbjct: 385 EEYHKQMEVYKQK 397
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEHKQKTA 259
EI I G +WK+++ +K PYEE +KE Y + M K+++ E L +EE +QK
Sbjct: 356 EIGKITGEEWKSMTDAQKAPYEEVASKQKEEYHKQMEVYKQKKLEETQSLEKEEEEQKKV 415
Query: 260 M--ELLEQYLQFKQEAD--------KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
M E L Q L+ K++ D K KK ++ DP +PK P +++ LFS E R L+
Sbjct: 416 MKQEAL-QLLKKKEKTDNIIKKTKEKRQKKKQENVDPNRPKKPASSFLLFSKEARKQLVE 474
Query: 310 DNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ V + + +WK ++ +K+ + E A + Y EME Y
Sbjct: 475 ERPGVNNSTINALISVKWKELSGTEKKTWSEKAAEGMAAYKREMEEY 521
>gi|297813579|ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
gi|297320510|gb|EFH50932.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/267 (68%), Positives = 222/267 (83%), Gaps = 5/267 (1%)
Query: 94 MLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLP 153
MLEKMK+EKEKTE+LLKEKDE+LK KEEELE + EQEKL ELKKLQKMKEFKPNM+
Sbjct: 48 MLEKMKIEKEKTEDLLKEKDEILKKKEEELETKDVEQEKLKTELKKLQKMKEFKPNMSFA 107
Query: 154 IVQCLKDKEQDRKKK----GCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGA 209
Q + E+D+K K C ERKRPS PYILWCKD WN+ KKENPEA+FKE +NILGA
Sbjct: 108 FSQSMAQTEEDKKGKKKKTDCVERKRPSTPYILWCKDNWNDVKKENPEADFKETSNILGA 167
Query: 210 KWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQF 269
KW+ +S EEKK YEEKYQ +KEAYLQV+ KE+RE EAMKLL++E KQKTAMELL+QYL F
Sbjct: 168 KWRTLSVEEKKFYEEKYQVDKEAYLQVITKEKREREAMKLLDDEQKQKTAMELLDQYLHF 227
Query: 270 KQEADKEN-KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNM 328
QEA+++N KK KK KDPLKPKHP++AY ++++ERRAAL +NK+V+EVAK+TGEEWKN+
Sbjct: 228 VQEAEQDNKKKAKKIKDPLKPKHPISAYLIYANERRAALKGENKSVIEVAKMTGEEWKNL 287
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+EEQK PY+++AKK KE Y +EME YK
Sbjct: 288 SEEQKAPYDQMAKKKKEIYLQEMEGYK 314
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 30/204 (14%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P Y+++ ++ K EN E+ + G +WKN+S E+K PY++ + +KE Y
Sbjct: 249 KHPISAYLIYANERRAALKGENKSV--IEVAKMTGEEWKNLSEEQKAPYDQMAKKKKEIY 306
Query: 234 LQ------------VMAKERRESEAMKLLEEEHKQKTAMELL------EQYLQFKQEADK 275
LQ M++++ E E MKL HKQ+ A++LL + ++ +E K
Sbjct: 307 LQEMEGYKITKEEETMSQKKEEEELMKL----HKQE-ALQLLKKKEKTDNIIKKTKEMTK 361
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQ 332
NKK ++ DP KPK P ++YFLF E R ++L ++ N A I+ +WK + EE+
Sbjct: 362 -NKKKNEKVDPNKPKKPASSYFLFCKEARKSVLEEHPGINNSTVTAHISL-KWKELGEEE 419
Query: 333 KRPYEEIAKKNKEKYNEEMEAYKR 356
K+ Y A + E Y +E+E Y +
Sbjct: 420 KQVYNGKAAELMEAYKKEVEEYNK 443
>gi|326499588|dbj|BAJ86105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/311 (53%), Positives = 223/311 (71%), Gaps = 23/311 (7%)
Query: 65 KKAAAKG-KAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEEL 123
K+A++KG KAK A S +L E+Q MLE+++LEKEK EE+++E+DE+++ KEEEL
Sbjct: 97 KRASSKGGKAKDAA----PSMSDELTELQGMLERLRLEKEKAEEMVRERDEVIRKKEEEL 152
Query: 124 ELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCA-----------E 172
E +GK+QE+L ELKK+Q++K F+P M P+ Q L K+ + E
Sbjct: 153 ETKGKQQERLQAELKKMQRVKVFEPTMNFPLAQSLLGKDHEEGGDKGKKKKKGKGKAGNE 212
Query: 173 RKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
RK+P+P YILWCKDQW E KK +P+ +FKE+TN LGAKWK +S EEK+PYEE+Y+ EKEA
Sbjct: 213 RKKPAPAYILWCKDQWAEIKK-SPDTDFKEVTNALGAKWKTLSNEEKQPYEERYRQEKEA 271
Query: 233 YLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN------KKPKKEKDP 286
YLQV+ +E+RE+EAMKLL+EE + TA ELL QYL+F+QEA+ + K KK KDP
Sbjct: 272 YLQVVGQEKREAEAMKLLDEEQMRWTAKELLGQYLKFRQEAEGDGNSKKAKNKMKKAKDP 331
Query: 287 LKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
KPK P++AYFL+S ERR AL+A+ K V E+ KITGEEWK MTE QK PYEE A+K KE
Sbjct: 332 SKPKQPMSAYFLYSQERRGALVAEKKTVPEIGKITGEEWKGMTEAQKAPYEEAARKQKEA 391
Query: 347 YNEEMEAYKRR 357
Y ++ME Y ++
Sbjct: 392 YQKQMEVYNQK 402
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM----AKERRESEAMKLLEEEHKQK 257
EI I G +WK ++ +K PYEE + +KEAY + M K+ E+ +++ EEE K+
Sbjct: 361 EIGKITGEEWKGMTEAQKAPYEEAARKQKEAYQKQMEVYNQKKLGENASLEKEEEEQKKI 420
Query: 258 TAMELLEQYLQFKQEAD--------KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
E L Q L+ K++AD K KK ++ DP +PK P +++ LFS E R L
Sbjct: 421 LKQEAL-QLLRKKEKADNIIKKTKEKRQKKKQQNADPNRPKKPASSFLLFSKEARKQLAE 479
Query: 310 DNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ V ++ + +WK+++ +K+ + + A + Y EM+ Y
Sbjct: 480 ERPGVNNSTLSALISVKWKDLSSAEKKVWSQKAAQGMAAYKMEMDEY 526
>gi|226530710|ref|NP_001144208.1| hypothetical protein [Zea mays]
gi|195638446|gb|ACG38691.1| hypothetical protein [Zea mays]
gi|413936487|gb|AFW71038.1| hypothetical protein ZEAMMB73_874920 [Zea mays]
Length = 487
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 261/366 (71%), Gaps = 25/366 (6%)
Query: 6 VASMAVEPSK-KPRSRRALKPKNSLANEAVVMAQTPSQSPIPNPPDAGLSKENHESLSQP 64
+A+ AVE + R R+AL L NEA + A +Q+ A LS + + +
Sbjct: 1 MATAAVESKRGSARGRKALVA--VLDNEANISAGKAAQA-------ADLS--SCSAQKKA 49
Query: 65 KKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELE 124
K+A ++ +A D+ E+Q MLE+++LEKEK EE+++E+DE+++ KEEE+E
Sbjct: 50 KRAPSRSSKAKAAAASAAVVVDDIAELQGMLERLRLEKEKAEEMVRERDEVIRKKEEEIE 109
Query: 125 LQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQD-------RKKKGCAERKRPS 177
+ KEQE+L EL+K Q+ KEFKP ++ P+V+ L +KEQ+ +K KG ERK+P
Sbjct: 110 TRDKEQERLQAELRKAQRAKEFKPTVSFPLVKSLLEKEQEADDKGKKKKGKGGHERKKPC 169
Query: 178 PPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
P Y+LW KDQW E KKENPEA+FKE++N LGAKWK + AEEK+PYE++Y+ EKEAYLQV+
Sbjct: 170 PAYVLWLKDQWTEVKKENPEADFKEVSNTLGAKWKALGAEEKQPYEDRYRQEKEAYLQVV 229
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN------KKPKKEKDPLKPKH 291
+E+RE+EAMKLLEE+ Q TA ELL+QYL+F+QEA++ + KK KK+KDP KPK
Sbjct: 230 GQEKREAEAMKLLEEQQMQWTAKELLDQYLKFRQEAEEGDCKKGRKKKSKKDKDPSKPKQ 289
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P++AYF++S ERRA L+A+ KNV E+ KITGEEWKNMTE Q+ PYEE+A+K KE+Y+++M
Sbjct: 290 PMSAYFVYSQERRATLVAEKKNVPEIGKITGEEWKNMTEGQRAPYEEVARKQKEEYHKQM 349
Query: 352 EAYKRR 357
E YK++
Sbjct: 350 EVYKQK 355
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 19/169 (11%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKL--LEEEHKQK 257
EI I G +WKN++ ++ PYEE + +KE Y + M K+++ EA L E+EHK+
Sbjct: 314 EIGKITGEEWKNMTEGQRAPYEEVARKQKEEYHKQMEVYKQKKAEEAASLEKEEQEHKKI 373
Query: 258 TAMELLEQYLQFKQEAD--------KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
E L Q L+ K++AD K KK ++ DP +PK P +++ LFS E R L+
Sbjct: 374 MKHEAL-QLLKKKEKADNIIKKTKEKRQKKKQENADPNRPKRPASSFLLFSKEERKQLIE 432
Query: 310 D----NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ N + L A IT +WK ++ E+++ + A Y +EME Y
Sbjct: 433 ERPGINNSTLN-ALITV-KWKELSGEERQAWNAKAAPAMAAYKKEMEEY 479
>gi|125538867|gb|EAY85262.1| hypothetical protein OsI_06634 [Oryza sativa Indica Group]
Length = 504
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/321 (52%), Positives = 236/321 (73%), Gaps = 31/321 (9%)
Query: 61 LSQPKKA------AAKGKAKQATKKQDTSFDKD-LQEMQEMLEKMKLEKEKTEELLKEKD 113
LS P+KA ++KGKA A ++ + D + E+Q MLEK++LEKEK EE+++E+D
Sbjct: 40 LSPPQKAKRATSKSSKGKAAAAAAAEEQASVVDAVSELQGMLEKLRLEKEKAEEMVRERD 99
Query: 114 EMLKMKEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKK----- 168
E+++ KEEE Q +L ELKK+Q+ KEFKP +++P+V+ L +K+Q+ +KK
Sbjct: 100 EVIRRKEEE-------QGRLQAELKKVQRAKEFKPTVSIPLVKALIEKDQEGEKKKGKGK 152
Query: 169 GCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQA 228
ERK+P P Y+LWCKDQWNE KKE+P+A+FKE++N LGAKWK + AEEK+PYEE+Y+
Sbjct: 153 AGHERKKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEEKQPYEERYRQ 212
Query: 229 EKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEA------------DKE 276
EKEAYLQV+ +E+RE+EAMKLLEEE Q+TA ELLEQYL+F+QEA K+
Sbjct: 213 EKEAYLQVVGQEKREAEAMKLLEEERMQRTAKELLEQYLKFRQEADDDGDGGDNKKASKK 272
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPY 336
KK KKEKDP KPK P++AYF+++ +RRAAL+A+ KNV E+ +ITGEEWK M+E +K P+
Sbjct: 273 GKKKKKEKDPSKPKQPMSAYFVYTQQRRAALVAEKKNVPEIGRITGEEWKAMSEAEKAPF 332
Query: 337 EEIAKKNKEKYNEEMEAYKRR 357
E A+K +E+Y EM AY++R
Sbjct: 333 EAAARKQREEYQVEMAAYRQR 353
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 202 EITNILGAKWKNVSAEEKKPYE-------EKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
EI I G +WK +S EK P+E E+YQ E AY Q +E E + +++
Sbjct: 312 EIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQEEAACQEKEEEEQKKI 371
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEK------------DPLKPKHPVTAYFLFSSE 302
++ A++LL++ K++ D KK K+E+ DP +PK P +++ LFS E
Sbjct: 372 MKQEALQLLKK----KEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKE 427
Query: 303 RRAALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
R L + V + + +WK + E +K+ + K E M AYKR M+E
Sbjct: 428 ARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAW-------NGKAAEAMAAYKRDMEE 480
>gi|47497872|dbj|BAD20056.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|50252043|dbj|BAD27975.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|125581537|gb|EAZ22468.1| hypothetical protein OsJ_06136 [Oryza sativa Japonica Group]
Length = 504
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 169/321 (52%), Positives = 236/321 (73%), Gaps = 31/321 (9%)
Query: 61 LSQPKKA------AAKGKAKQATKKQDTSFDKD-LQEMQEMLEKMKLEKEKTEELLKEKD 113
LS P+KA ++KGKA A ++ + D + E+Q MLE+++LEKEK EE+++E+D
Sbjct: 40 LSPPQKAKRATSKSSKGKAAAAAAAEEQASVVDAVSELQGMLEELRLEKEKAEEMVRERD 99
Query: 114 EMLKMKEEELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKK----- 168
E+++ KEEE Q +L ELKK+Q+ KEFKP +++P+V+ L +K+Q+ +KK
Sbjct: 100 EVIRRKEEE-------QGRLQAELKKVQRAKEFKPTVSIPLVKALIEKDQEGEKKKGKGK 152
Query: 169 GCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQA 228
ERK+P P Y+LWCKDQWNE KKE+P+A+FKE++N LGAKWK + AEEK+PYEE+Y+
Sbjct: 153 AGHERKKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEEKQPYEERYRQ 212
Query: 229 EKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEA------------DKE 276
EKEAYLQV+ +E+RE+EAMKLLEEE Q+TA ELLEQYL+F+QEA K+
Sbjct: 213 EKEAYLQVVGQEKREAEAMKLLEEEQMQRTAKELLEQYLKFRQEADDDGDGGDNKKASKK 272
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPY 336
KK KKEKDP KPK P++AYF+++ +RRAAL+A+ KNV E+ +ITGEEWK M+E +K P+
Sbjct: 273 GKKKKKEKDPSKPKQPMSAYFVYTQQRRAALVAEKKNVPEIGRITGEEWKAMSEAEKAPF 332
Query: 337 EEIAKKNKEKYNEEMEAYKRR 357
E A+K +E+Y EM AY++R
Sbjct: 333 EAAARKQREEYQVEMAAYRQR 353
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 202 EITNILGAKWKNVSAEEKKPYE-------EKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
EI I G +WK +S EK P+E E+YQ E AY Q +E E + +++
Sbjct: 312 EIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQEEAACQEKEEEEQKKI 371
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEK------------DPLKPKHPVTAYFLFSSE 302
++ A++LL++ K++ D KK K+E+ DP +PK P +++ LFS E
Sbjct: 372 MKQEALQLLKK----KEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKE 427
Query: 303 RRAALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
R L + V + + +WK + E +K+ + K E M AYKR M+E
Sbjct: 428 ARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAW-------NGKAAEAMAAYKRDMEE 480
>gi|356498002|ref|XP_003517844.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
13-like [Glycine max]
Length = 302
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/190 (75%), Positives = 169/190 (88%)
Query: 168 KGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQ 227
KGC+E+KRPSPPYILW KDQ NE KK NPEA FKEI+ +LG KWK V+AEEKKPYE Y
Sbjct: 2 KGCSEKKRPSPPYILWMKDQRNEIKKVNPEAGFKEISTMLGVKWKTVTAEEKKPYEGIYH 61
Query: 228 AEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL 287
AEKEAYLQV+AKE+ E+E+M+LLE+E KQ+TAMELLEQY+QFKQEA+K+ KK KKEKDPL
Sbjct: 62 AEKEAYLQVIAKEKHETESMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPL 121
Query: 288 KPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY 347
KPKHP++AYFLF+++RRAAL A+NKN LEV KIT EEWKNMTEEQKRPYEE+AKKNKE+Y
Sbjct: 122 KPKHPMSAYFLFTNDRRAALAAENKNFLEVPKITFEEWKNMTEEQKRPYEEMAKKNKEQY 181
Query: 348 NEEMEAYKRR 357
EMEAYK++
Sbjct: 182 ALEMEAYKQK 191
>gi|242064692|ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/284 (57%), Positives = 223/284 (78%), Gaps = 16/284 (5%)
Query: 90 EMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLHMELKKLQKMKEFKPN 149
E+Q MLE+++LEKEK EE+++E+DE+++ KEEE+E + KEQ +L EL+K+Q+ KEFKP
Sbjct: 73 ELQGMLERLRLEKEKAEEMVRERDEVIRKKEEEIETKEKEQGRLQAELRKVQRAKEFKPT 132
Query: 150 MTLPIVQCLKDKEQDRKKKGCA---------ERKRPSPPYILWCKDQWNEAKKENPEAEF 200
++LP+V+ L +K+QD KG ERK+P P Y+LW KDQW E K+ENPEA+F
Sbjct: 133 VSLPLVKSLLEKDQDADDKGKKKKGKGKAGPERKKPCPAYVLWLKDQWTEVKEENPEADF 192
Query: 201 KEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAM 260
KE+++ LG KWK +SAEEK+PYEE+Y+ EKEAYLQV+ +E+RE+EAMKLLEE+ Q TA
Sbjct: 193 KEVSSTLGTKWKALSAEEKQPYEERYRQEKEAYLQVVGQEKREAEAMKLLEEQQMQWTAK 252
Query: 261 ELLEQYLQFKQEADKEN-------KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN 313
ELL+QYL+F+QEA++E K KK+KDP KPK P++AYF++S ERRAAL+A+ KN
Sbjct: 253 ELLDQYLKFRQEAEEEGDSKKGKRKNSKKDKDPSKPKQPMSAYFVYSQERRAALVAEKKN 312
Query: 314 VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
V E+ KITGEEWKNMTE QK PYE++A+K KE+Y ++ME YK++
Sbjct: 313 VPEIGKITGEEWKNMTEAQKAPYEKVARKQKEEYQKQMEVYKQK 356
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 15/167 (8%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEHKQKTA 259
EI I G +WKN++ +K PYE+ + +KE Y + M K+++ EA L +EE + K
Sbjct: 315 EIGKITGEEWKNMTEAQKAPYEKVARKQKEEYQKQMEVYKQKKIEEAASLEKEEEEHKKI 374
Query: 260 M--ELLEQYLQFKQEAD------KENKKPKKEK--DPLKPKHPVTAYFLFSSERRAALLA 309
M E L Q L+ K++AD KEN++ KK++ DP +PK P +++ LFS E R LL
Sbjct: 375 MKQEAL-QLLKKKEKADNIIKKTKENRQKKKQENADPNRPKRPASSFLLFSKEARKQLLE 433
Query: 310 DNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ + + + +WK ++ E+++ + A Y +EME Y
Sbjct: 434 ERPGINNSSLNALISVKWKELSGEERQAWNAKAAPAMAAYKKEMEEY 480
>gi|294463267|gb|ADE77169.1| unknown [Picea sitchensis]
Length = 482
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/281 (59%), Positives = 223/281 (79%), Gaps = 6/281 (2%)
Query: 83 SFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLHMELKKLQK 142
S +++L+ ++ L+K+ +EKEKT++LL+E+D +LK KE EL+L+ K QEKL +ELKKLQK
Sbjct: 41 SLEEELEAVRVRLQKLNMEKEKTDKLLEERDALLKEKEAELQLKAKAQEKLQLELKKLQK 100
Query: 143 MKEFKPNMTLPIVQCLKDKE------QDRKKKGCAERKRPSPPYILWCKDQWNEAKKENP 196
+K F P M+ P+ Q L+ E + +KKK K+PSP YILWC++QWN+ K ENP
Sbjct: 101 LKGFNPVMSFPLGQSLRMSELAKEEEKKKKKKDPNRPKKPSPAYILWCQEQWNQVKSENP 160
Query: 197 EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQ 256
FK++ ILGAKWK +SAEEKKPYEEKY+AEKEAYLQV+ +ERRE+EA+KLL +E KQ
Sbjct: 161 NPVFKDMGAILGAKWKTLSAEEKKPYEEKYEAEKEAYLQVVGQERRETEALKLLHDEQKQ 220
Query: 257 KTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLE 316
KTA+ELLEQYLQ++++A+ + K +KEKDP KPKHPVTA+F F++ERRAALL +N NVL+
Sbjct: 221 KTALELLEQYLQYQKDAEGKEKSKRKEKDPSKPKHPVTAFFAFTNERRAALLEENHNVLQ 280
Query: 317 VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
+AKI GEEWKNMT+E++ PYE+IA + KEKY EME YK++
Sbjct: 281 IAKILGEEWKNMTKEERAPYEQIAAEAKEKYMGEMELYKQK 321
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE- 223
RK+K ++ K P + + ++ +EN +I ILG +WKN++ EE+ PYE
Sbjct: 245 RKEKDPSKPKHPVTAFFAFTNERRAALLEEN--HNVLQIAKILGEEWKNMTKEERAPYEQ 302
Query: 224 ------EKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELL-----EQYLQFKQE 272
EKY E E Y Q A+E + + + +++ ++LL + L+ +
Sbjct: 303 IAAEAKEKYMGEMELYKQKKAEEASSASKEEEELRKLEREQGLQLLRKKEKNETLKRTMK 362
Query: 273 ADKENKKPKKEK--DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNM 328
KK KEK DP +PK P T++ LFS E R L+ + V + + +WK++
Sbjct: 363 KKLIQKKQLKEKNSDPNRPKKPPTSFLLFSKETRKKLVQERPGVNNTTINALISLKWKDL 422
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
+K+ + + A +Y +E+E Y +
Sbjct: 423 GTAEKQKWVDEAAGAMVQYKKEVEEYNK 450
>gi|356554781|ref|XP_003545721.1| PREDICTED: uncharacterized protein LOC100781233 [Glycine max]
Length = 602
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 162/222 (72%), Gaps = 20/222 (9%)
Query: 155 VQCLKDKEQDRKKKGCAERKR-------------------PSPPYILWCKDQWNEAKKEN 195
QC + +E+D AER+R S C D + KK N
Sbjct: 206 CQC-RIEEEDSSASDAAERRRVTWERLEATAANCVPVQSTTSVAQCFLCIDGLVQIKKAN 264
Query: 196 PEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHK 255
PEAEFKEI+ ++GAKWK+V+ EE KPYE Y A KEAYLQV+AKE+RE+E+M+LLE+E K
Sbjct: 265 PEAEFKEISTMVGAKWKSVTVEENKPYEGIYHAGKEAYLQVIAKEKRETESMRLLEDEQK 324
Query: 256 QKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL 315
Q+TAMELLEQY+QFKQEA+K+ KK KKEKDPLKPKHP++AY F+++RRAAL A NKN+L
Sbjct: 325 QRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPMSAYLFFTNDRRAALAARNKNLL 384
Query: 316 EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
EV KIT EEWKNM EEQKRPYEE+AKKNKE+Y +MEAYK++
Sbjct: 385 EVPKITSEEWKNMAEEQKRPYEEMAKKNKEQYALQMEAYKQK 426
>gi|168021929|ref|XP_001763493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685286|gb|EDQ71682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 210/310 (67%), Gaps = 11/310 (3%)
Query: 64 PKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEEL 123
P + A GK + + + S +++L+ M + L+++ LEKE+ E L+EK+E+L K E
Sbjct: 27 PVSSKATGKTRGLKESSNLSLEEELEAMTKALKQVSLEKERNEAKLREKEELLSAKAAEA 86
Query: 124 E-----LQGKEQEKLHME--LKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAER-KR 175
E L+ +++EK +E L+KLQK++ F+P++ L + +++++K+K +R K+
Sbjct: 87 ERMQILLKSRDEEKKRLEDKLRKLQKVQGFQPSLNLSVPNPSAPEDKNKKQKKDPKRLKK 146
Query: 176 PSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQ 235
P ++LWCKD + +ENP A F EI+ ILG KWKNV EE+KPYE++Y+ EK YL+
Sbjct: 147 PKTAFLLWCKDYRQKVCEENPNATFAEISTILGDKWKNVPEEERKPYEDRYKVEKNVYLK 206
Query: 236 VMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN---KKPKKEKDPLKPKHP 292
++ +ERRE+EA+KL EE +K A ELLEQYL +K+E + + KK KEKDPL+PKHP
Sbjct: 207 LVGEERRETEALKLFHEEQNKKQAQELLEQYLAYKKETESGSDKKKKYVKEKDPLRPKHP 266
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
++A+F FS RR ALL +NK V E+AKI GEEWK+M+ ++ P+EEIA K KE+Y+ E+E
Sbjct: 267 ISAFFAFSQSRRPALLEENKPVTEIAKILGEEWKSMSPSKRAPFEEIAAKEKERYSVELE 326
Query: 353 AYKRRMKELL 362
YK+ E L
Sbjct: 327 TYKKNKAEDL 336
>gi|147815173|emb|CAN65655.1| hypothetical protein VITISV_040565 [Vitis vinifera]
Length = 277
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 147/169 (86%), Gaps = 9/169 (5%)
Query: 189 NEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMK 248
NEAKK NP+A+FKEI+NILGAKWK +S EEKKPYEEKYQ EKEAYLQ++ KE+RE+EAM+
Sbjct: 32 NEAKKANPDADFKEISNILGAKWKTISPEEKKPYEEKYQTEKEAYLQIVGKEKRENEAMR 91
Query: 249 LLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALL 308
LLEEE KQKTAMELLEQYL FKQEA+KENKK KKEKDPLKPKHP ERRAALL
Sbjct: 92 LLEEEQKQKTAMELLEQYLHFKQEAEKENKKKKKEKDPLKPKHP---------ERRAALL 142
Query: 309 ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
A++KNVLE+AKI GEEWKNMTE+QK PYEEIAKKNK KY EEME YK++
Sbjct: 143 AEDKNVLEIAKIAGEEWKNMTEKQKPPYEEIAKKNKAKYQEEMELYKQQ 191
>gi|302755040|ref|XP_002960944.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
gi|300171883|gb|EFJ38483.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
Length = 457
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/308 (41%), Positives = 193/308 (62%), Gaps = 18/308 (5%)
Query: 61 LSQPKKAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKE 120
+S P +AA KG K +++++L+ M + L KM+LEKE+ ++L+ E+ +K +
Sbjct: 18 VSPPMRAAGKGL------KSARNWEEELETMTQKLNKMRLEKEEVQKLVLEQGAKIKEQH 71
Query: 121 EELELQGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCA-----ER-K 174
+ + +Q KE EKL +++KL+K+KEF+PN+ + KG ER K
Sbjct: 72 DRIAMQSKEHEKLQEKIRKLEKVKEFQPNLVSLVCFFFFFFSSSDDSKGKKKKNDPERIK 131
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
+P Y LWC DQ + + +NP A KE+++I G WK+VS EEKKPYEE YQ KE YL
Sbjct: 132 KPLSSYFLWCNDQREKVRAQNPNAGIKELSSIFGELWKSVSEEEKKPYEEIYQKNKEEYL 191
Query: 235 -QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENK----KPKKEKDPLKP 289
Q++ KE+RE+EA+KLL++E +K + E+L+Q++++K+ D +N +KEKDP KP
Sbjct: 192 KQLVGKEKREAEALKLLQDEKNRKLSKEILDQFMEYKK-FDAQNSLLYCSFRKEKDPEKP 250
Query: 290 KHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
K P T Y +S ERR AL+ +N V ++ KI GEEW++M E+ + PYE+IA K Y
Sbjct: 251 KRPTTGYMAYSEERRPALMNENLKVPQIGKILGEEWRSMDEKARAPYEKIATDAKATYLT 310
Query: 350 EMEAYKRR 357
EMEAY ++
Sbjct: 311 EMEAYNKK 318
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 24/246 (9%)
Query: 125 LQGKEQEKLHME-LKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPYILW 183
LQ ++ KL E L + + K+F +L + C KE+D +K KRP+ Y+ +
Sbjct: 208 LQDEKNRKLSKEILDQFMEYKKFDAQNSL--LYCSFRKEKDPEKP-----KRPTTGYMAY 260
Query: 184 CKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM-----A 238
+++ EN + +I ILG +W+++ + + PYE+ K YL M
Sbjct: 261 SEERRPALMNEN--LKVPQIGKILGEEWRSMDEKARAPYEKIATDAKATYLTEMEAYNKK 318
Query: 239 KERRESEAMKLLEEEHKQK--TAMELLEQYLQFKQEADKENKKPKKEK----DPLKPKHP 292
K + E A + L+E+ K+ +ELL+Q + + EA K K P+K K +P KPK
Sbjct: 319 KAQEEVVAEQALKEKAKRDKVCGLELLKQK-EKEDEAMKAEKAPRKAKAKTAEPGKPKKA 377
Query: 293 VTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
TAY LF E R L A+ E+ + +W M E+K+PY A K KY E
Sbjct: 378 ATAYILFGMEYRKKLQAEMPTAKFAELTALVASKWNEMGAEEKQPYVNQAGVEKLKYQEA 437
Query: 351 MEAYKR 356
ME +KR
Sbjct: 438 MEEFKR 443
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP + K P+++YFL+ +++R + A N N + E++ I GE WK+++EE+K+PYEEI +K
Sbjct: 126 DPERIKKPLSSYFLWCNDQREKVRAQNPNAGIKELSSIFGELWKSVSEEEKKPYEEIYQK 185
Query: 343 NKEKYNEEMEAYKRRMKELL 362
NKE+Y +++ ++R E L
Sbjct: 186 NKEEYLKQLVGKEKREAEAL 205
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+ + YIL+ + + + E P A+F E+T ++ +KW + AEEK+PY + EK Y
Sbjct: 375 KKAATAYILFGMEYRKKLQAEMPTAKFAELTALVASKWNEMGAEEKQPYVNQAGVEKLKY 434
Query: 234 LQVMAKERRES 244
+ M + +R S
Sbjct: 435 QEAMEEFKRLS 445
>gi|297809365|ref|XP_002872566.1| hypothetical protein ARALYDRAFT_911461 [Arabidopsis lyrata subsp.
lyrata]
gi|297318403|gb|EFH48825.1| hypothetical protein ARALYDRAFT_911461 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/149 (69%), Positives = 130/149 (87%), Gaps = 1/149 (0%)
Query: 192 KKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLE 251
KK NPEA+FKE +NI GAKWK +S EE KPYEEKYQA+KEAYLQV+ KE+RE EAMKLL+
Sbjct: 6 KKPNPEADFKETSNIFGAKWKGISVEENKPYEEKYQADKEAYLQVITKEKREREAMKLLD 65
Query: 252 EEHKQKTAMELLEQYLQFKQEADKEN-KKPKKEKDPLKPKHPVTAYFLFSSERRAALLAD 310
++ KQKTAMELL+QYLQF QEA+++N KK KK KDPLKPKHP+ AY ++++E RAAL +
Sbjct: 66 DQQKQKTAMELLDQYLQFVQEAEQDNKKKAKKIKDPLKPKHPIFAYLIYANEGRAALKGE 125
Query: 311 NKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
NK+V+EVAKITGEEWK+++EEQK PY+++
Sbjct: 126 NKSVIEVAKITGEEWKSLSEEQKAPYDQV 154
>gi|302767286|ref|XP_002967063.1| hypothetical protein SELMODRAFT_144662 [Selaginella moellendorffii]
gi|300165054|gb|EFJ31662.1| hypothetical protein SELMODRAFT_144662 [Selaginella moellendorffii]
Length = 430
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 197/293 (67%), Gaps = 7/293 (2%)
Query: 66 KAAAKGKAKQATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELEL 125
+AA KG K +++ +L+ M + L KM+LEKE+ ++L+ E+ +K + + + +
Sbjct: 2 RAAGKGL------KSARNWEGELETMTQKLNKMRLEKEEVQKLVLEQGAKIKEQHDRIAM 55
Query: 126 QGKEQEKLHMELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAER-KRPSPPYILWC 184
Q KE EKL +++KL+K+KEF+PN+++P+ D + +KKK ER K+P Y LWC
Sbjct: 56 QSKEHEKLQEKIRKLEKVKEFQPNLSIPLPDESSDDSKGKKKKNDPERIKKPLSSYFLWC 115
Query: 185 KDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRES 244
DQ + + +NP A K++++I G WK+VS EEKKPYEE YQ KE YL++++KE+RE+
Sbjct: 116 NDQREKVRAQNPNAGIKDLSSIFGELWKSVSDEEKKPYEEIYQKNKEEYLKLVSKEKREA 175
Query: 245 EAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERR 304
EA+KLL++E +K + E+L+Q++++K+E + K KKEKDP KPK P T Y +S ERR
Sbjct: 176 EALKLLQDEKNRKLSKEILDQFMEYKKEIQAQAKPKKKEKDPEKPKRPTTGYMAYSEERR 235
Query: 305 AALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
AL+ +N V ++ KI GEEW++M E+ + PYE+IA K Y EMEAY ++
Sbjct: 236 PALMNENLKVPQIGKILGEEWRSMDEKARAPYEKIATDAKATYLTEMEAYNKK 288
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP+ Y+ + +++ EN + +I ILG +W+++ + + PYE+ K YL
Sbjct: 222 RPTTGYMAYSEERRPALMNEN--LKVPQIGKILGEEWRSMDEKARAPYEKIATDAKATYL 279
Query: 235 QVM-----AKERRESEAMKLLEEEHKQK--TAMELLEQYLQFKQEAD------KENKKPK 281
M K + E A + L+E+ K+ +ELL+Q K++ D K K P+
Sbjct: 280 TEMEAYNKKKAQEEVVAEQALKEKAKRDKVCGLELLKQ----KEKEDEVKKAMKAEKAPR 335
Query: 282 KEK----DPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRP 335
K K +P KPK TAY LF E R L A+ E+ + +W M E+K+P
Sbjct: 336 KAKAKTAEPGKPKKAATAYILFGMEYRKKLQAEMPTAKFAELTALVASKWNEMGAEEKQP 395
Query: 336 YEEIAKKNKEKYNEEMEAYKR 356
Y + A K+KY E ME +KR
Sbjct: 396 YVDQAGVEKQKYQEAMEEFKR 416
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+ + YIL+ + + + E P A+F E+T ++ +KW + AEEK+PY ++ EK+ Y
Sbjct: 348 KKAATAYILFGMEYRKKLQAEMPTAKFAELTALVASKWNEMGAEEKQPYVDQAGVEKQKY 407
Query: 234 LQVMAKERRES 244
+ M + +R S
Sbjct: 408 QEAMEEFKRLS 418
>gi|356514715|ref|XP_003526049.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 426
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 130/152 (85%)
Query: 206 ILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQ 265
I+ + K V+AEEK PYE Y A KEAYLQV+A E+RE+++M+ LE+E KQ+TAMEL EQ
Sbjct: 123 IMQNRQKIVTAEEKMPYEGIYHAGKEAYLQVIAMEKRETDSMRFLEDEQKQRTAMELFEQ 182
Query: 266 YLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEW 325
Y+QFKQEA+K+ KK KKEKDPLKPKHP++AY LF+++RRAAL A+N N+LEV KIT +EW
Sbjct: 183 YMQFKQEAEKDGKKNKKEKDPLKPKHPMSAYLLFTNDRRAALAAENNNLLEVPKITSKEW 242
Query: 326 KNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
KNMTEEQKRPYEE+AKKNKE+Y +MEAYK++
Sbjct: 243 KNMTEEQKRPYEEMAKKNKEQYALQMEAYKQK 274
>gi|167998110|ref|XP_001751761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696859|gb|EDQ83196.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 168/246 (68%), Gaps = 13/246 (5%)
Query: 108 LLKEKDEMLKMKEEE-------LELQGKEQEKLHMELKKLQKMKEFKP--NMTLPIVQCL 158
+L+EK+E L + E LE G+E++KL +L+KLQK++ F+P N++ P
Sbjct: 1 MLREKEEQLTAQAAETERMQKLLESGGEEKKKLEDKLRKLQKVQGFQPTLNLSRPNPNAP 60
Query: 159 KDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEE 218
+D + +KKK K+P ++LWCK + +ENP A F EI+ ILG KWKNVS E+
Sbjct: 61 EDLTK-KKKKDPNRLKKPKSAFLLWCKVHRQKVCEENPNATFAEISTILGDKWKNVSEED 119
Query: 219 KKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADK--- 275
+KPYE++Y+ EK+ YL+++ KE+RE+EA+KL EE +K A ELLEQYL +K+E +
Sbjct: 120 RKPYEDRYKVEKDVYLKLVGKEKREAEALKLFHEEENKKLAQELLEQYLAYKKEMESDVA 179
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRP 335
+ KK KKEKDPLKPKHP+TA+F FS RR ALL NK V E+AKI GEEWK+M+ ++ P
Sbjct: 180 DGKKKKKEKDPLKPKHPITAFFAFSQSRRPALLELNKPVTEIAKILGEEWKSMSPAKRAP 239
Query: 336 YEEIAK 341
+EEI K
Sbjct: 240 FEEIMK 245
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 31/163 (19%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAME 261
EI ILG +WK++S ++ P+EE +++ + K+K M
Sbjct: 220 EIAKILGEEWKSMSPAKRAPFEE------------------------IMKNQAKEKKDMA 255
Query: 262 LLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT 321
L ++ L +++ KE KK K DP KPK P+++Y +F E R + L++N+ L A+
Sbjct: 256 LGKKDLVSEKDQAKEKKKAK---DPNKPKKPLSSYLIFGMEMRKS-LSNNQVGLNFAETN 311
Query: 322 G---EEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKEL 361
++WK ++E+ K + E A K+KY+ +ME Y+ + EL
Sbjct: 312 AHISQKWKELSEKDKEVWNEKAAVLKKKYDADMEEYRSTLPEL 354
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP + K P +A+ L+ R + +N N E++ I G++WKN++EE ++PYE+
Sbjct: 66 KKKKDPNRLKKPKSAFLLWCKVHRQKVCEENPNATFAEISTILGDKWKNVSEEDRKPYED 125
Query: 339 IAKKNKEKY 347
K K+ Y
Sbjct: 126 RYKVEKDVY 134
>gi|118488333|gb|ABK95985.1| unknown [Populus trichocarpa]
Length = 232
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 89/100 (89%), Gaps = 3/100 (3%)
Query: 260 MELLEQYLQFKQEADKENKKPKKEK---DPLKPKHPVTAYFLFSSERRAALLADNKNVLE 316
MELLEQYLQFKQEA +E K K K DPLKPKHP++A+FLFS+ERRAALLA+NKNVLE
Sbjct: 1 MELLEQYLQFKQEAGQEENKKNKTKKEKDPLKPKHPLSAFFLFSNERRAALLAENKNVLE 60
Query: 317 VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
VAKI GEEWKNMTE+QKRPYEEIAKKNKEKY +EMEAYK+
Sbjct: 61 VAKIAGEEWKNMTEKQKRPYEEIAKKNKEKYTQEMEAYKQ 100
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 31/179 (17%)
Query: 202 EITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEHKQKTA 259
E+ I G +WKN++ ++K+PYEE + KE Y Q M K+ ++ EAM L +K
Sbjct: 60 EVAKIAGEEWKNMTEKQKRPYEEIAKKNKEKYTQEMEAYKQNKDEEAMNL------KKEG 113
Query: 260 MELLEQYLQFKQEADKENKKPKKEK------------------DPLKPKHPVTAYFLFSS 301
EL++ LQ KQEA + KK +K + DP KPK P +++ LFS
Sbjct: 114 EELMK--LQ-KQEALQLLKKKEKTENIIKKTKEQRQKKQQQNADPNKPKKPASSFLLFSK 170
Query: 302 ERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
E R +L+ ++ N + + +WK + +E+K+ + A + E Y +E+E Y + +
Sbjct: 171 ETRKSLVHEHPGINSSTLTAMISVKWKELIQEEKQIWNCKAAEAMEAYKKELEEYHKSV 229
>gi|115445389|ref|NP_001046474.1| Os02g0258200 [Oryza sativa Japonica Group]
gi|113536005|dbj|BAF08388.1| Os02g0258200, partial [Oryza sativa Japonica Group]
Length = 269
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 82/118 (69%), Gaps = 12/118 (10%)
Query: 252 EEHKQKTAMELLEQYLQFKQEADKENKKPK------------KEKDPLKPKHPVTAYFLF 299
EE Q+TA ELLEQYL+F+QEAD + KEKDP KPK P++AYF++
Sbjct: 1 EEQMQRTAKELLEQYLKFRQEADDDGDGGDNKKASKKGKKKKKEKDPSKPKQPMSAYFVY 60
Query: 300 SSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
+ +RRAAL+A+ KNV E+ +ITGEEWK M+E +K P+E A+K +E+Y EM AY++R
Sbjct: 61 TQQRRAALVAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQR 118
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 202 EITNILGAKWKNVSAEEKKPYE-------EKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
EI I G +WK +S EK P+E E+YQ E AY Q +E E + +++
Sbjct: 77 EIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQEEAACQEKEEEEQKKI 136
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEK------------DPLKPKHPVTAYFLFSSE 302
++ A++LL++ K++ D KK K+E+ DP +PK P +++ LFS E
Sbjct: 137 MKQEALQLLKK----KEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKE 192
Query: 303 RRAALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
R L + V + + +WK + E +K+ + K E M AYKR M+E
Sbjct: 193 ARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAW-------NGKAAEAMAAYKRDMEE 245
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 29/179 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PY+ + K+ +++P A E+ ++GA+W+ ++ E+KKPY + + ++E Y + M
Sbjct: 55 PYMCFNKEVRPAIMQQHPNASVTEVAKLIGAQWRQLTDEQKKPYNDMARTDRERYKEAM- 113
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFL 298
+ EE +++ KK+KDP PK P +AYF+
Sbjct: 114 ---KNYVPTPGFEEGGRRR-----------------------KKKKDPNAPKKPKSAYFV 147
Query: 299 FSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F+ RR AL A V + AK TGEEW+ MTEEQKRP++ A++ K++Y++ + YK
Sbjct: 148 FAETRRDALRAQYPEDRVSDTAKRTGEEWRGMTEEQKRPFQLKAQELKQEYDQAVAEYK 206
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP KP+ +T Y F+ E R A++ N +V EVAK+ G +W+ +T+EQK+PY ++A+
Sbjct: 45 DPNKPRGALTPYMCFNKEVRPAIMQQHPNASVTEVAKLIGAQWRQLTDEQKKPYNDMART 104
Query: 343 NKEKYNEEMEAY 354
++E+Y E M+ Y
Sbjct: 105 DRERYKEAMKNY 116
>gi|356558489|ref|XP_003547539.1| PREDICTED: uncharacterized protein LOC100817234 [Glycine max]
Length = 739
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 29/131 (22%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
+P+ C D + KK NPEAEFKEI+ +
Sbjct: 290 KPTDSQFFLCIDGLVQIKKANPEAEFKEISTM---------------------------- 321
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
V+AKE+ E+E+M LLE+E KQ+TAMELLEQY+QFKQEA+K+ KK KKEKDPLKPKHP+
Sbjct: 322 -VIAKEKLETESMSLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPMG 380
Query: 295 AYFLFSSERRA 305
+ + E +A
Sbjct: 381 KFPVIDFEAKA 391
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 30/178 (16%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+ + + + K+NP+ + +++ ++GA W+ +S KKPYEE + +K+ Y MA
Sbjct: 45 YMFFSQKVRPQFSKDNPDKKMTDVSKLIGAAWREMSDAAKKPYEEMARRDKQRYQHQMA- 103
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
+ EL K+ K+ KDP PK P+TAYFL+
Sbjct: 104 -------------TYVPPPTREL--------------GKRGKRRKDPDAPKKPLTAYFLY 136
Query: 300 SSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+++RRAAL A N+N V ++AKI G EWK++++ K+PY++ A + K +Y +E+E YK
Sbjct: 137 AADRRAALRAQNRNATVADIAKIIGAEWKDLSDAVKKPYQDRADRLKSQYQKEVELYK 194
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 37/191 (19%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ +C +Q + KKENPE + EI+ +LG KWK +S EEKKPY++ Y+A+KE Y
Sbjct: 27 KKPLSGYMRYCNEQREQVKKENPELKLTEISKVLGEKWKELSEEEKKPYQDAYEADKEKY 86
Query: 234 -LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHP 292
LQ+ EE+K K + KK DP KPK P
Sbjct: 87 DLQM---------------EEYK-------------------KTHPTGKKNADPNKPKRP 112
Query: 293 VTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+++Y +FS+++R + N ++ E+ + G+ WK + EE+K+ YE+ + K+ Y E+
Sbjct: 113 LSSYIIFSNDKREEVKRKNPDMSNKEITTLLGKMWKELPEEEKQEYEKQHAEEKKAYEEK 172
Query: 351 MEAYKRRMKEL 361
M Y+R EL
Sbjct: 173 MGEYRREHPEL 183
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP YI++ D+ E K++NP+ KEIT +LG WK + EEK+ YE+++ EK+AY
Sbjct: 110 KRPLSSYIIFSNDKREEVKRKNPDMSNKEITTLLGKMWKELPEEEKQEYEKQHAEEKKAY 169
Query: 234 LQVMAKERRESEAMK 248
+ M + RRE +K
Sbjct: 170 EEKMGEYRREHPELK 184
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 50/190 (26%)
Query: 174 KRPSPPYILWC---KDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK 230
K+P YI + + + ++ +E P+A EI + G++W+ ++A +KKPY+E +K
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAH--EIAKMCGSEWRAMTASQKKPYDELAARDK 120
Query: 231 EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPK 290
+ Y++ ++K R+++ DP KPK
Sbjct: 121 QRYMEEISKFRKKA----------------------------------------DPDKPK 140
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKRPYEEIAKKNKEKY 347
P TAYF F +E R A+ A K V+E K+T GE+W+ MT +K YE + K+KE+Y
Sbjct: 141 RPQTAYFYFLAEFRKAMKA--KGVIEGKKLTSLSGEKWRAMTPAEKAKYEAMVTKDKERY 198
Query: 348 NEEMEAYKRR 357
EM+AY+++
Sbjct: 199 QREMDAYRKK 208
>gi|325181980|emb|CCA16434.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 204
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 44/190 (23%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
KR ++ + D ++ KKE PE EF +I+ +G +WK E+++PYEE +Y
Sbjct: 26 KRALSAFMFFSNDIRDQVKKEMPELEFLQISTEIGKRWKQCKPEDRRPYEELAEADKKRY 85
Query: 227 QAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDP 286
Q EKE Y+ + E S +K+KDP
Sbjct: 86 QEEKEDYVPDPSFETTRST-----------------------------------RKKKDP 110
Query: 287 LKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
PK ++AYF F +E R AL +N K + E+A + E+W+N+ E+++ Y ++ + K
Sbjct: 111 DAPKRALSAYFFFCNEARDALRQENPDKKITEIASLLAEKWRNLPEKKRVKYHKMHEGAK 170
Query: 345 EKYNEEMEAY 354
KY E+M+ Y
Sbjct: 171 VKYQEQMDVY 180
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK ++A+ FS++ R + + + L+++ G+ WK E +RPYEE+A+ +K++
Sbjct: 25 PKRALSAFMFFSNDIRDQVKKEMPELEFLQISTEIGKRWKQCKPEDRRPYEELAEADKKR 84
Query: 347 YNEEMEAY 354
Y EE E Y
Sbjct: 85 YQEEKEDY 92
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KR Y +C + + ++ENP+ + EI ++L KW+N+ +++ Y +
Sbjct: 105 RKKKDPDAPKRALSAYFFFCNEARDALRQENPDKKITEIASLLAEKWRNLPEKKRVKYHK 164
Query: 225 KYQAEKEAYLQVM 237
++ K Y + M
Sbjct: 165 MHEGAKVKYQEQM 177
>gi|386783721|gb|AFJ24755.1| high mobility group-2 [Schmidtea mediterranea]
Length = 192
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 45/194 (23%)
Query: 174 KRPS---PPYILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQA 228
K+PS YI++ + E KK+NP+ F EI+ I KWKN+S +EK+ Y QA
Sbjct: 4 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQA 63
Query: 229 EKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKE----- 283
+K+ Y + M E Y E + +N+KP K+
Sbjct: 64 DKKRYTKEM--------------------------EGY-----EPETDNRKPSKKAKREA 92
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP KPK P+TA+F FS+E R + N V ++AK+ G+ W ++ K YEE+ K
Sbjct: 93 KDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK--YEEMNK 150
Query: 342 KNKEKYNEEMEAYK 355
+ KEKYN M YK
Sbjct: 151 EAKEKYNLAMLEYK 164
>gi|407404609|gb|EKF29994.1| high mobility group protein, putative [Trypanosoma cruzi
marinkellei]
Length = 361
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 34/178 (19%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PYIL+ D ++ K++NPE + EI LG W AE +EKY
Sbjct: 212 PYILFGNDHRDKVKEQNPEMKNTEILQRLGKMW----AEASDAVKEKY------------ 255
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPK---KEKDPLKPKHPVTA 295
K L E+ K++ EL E +K+ E K+ K KD PK ++A
Sbjct: 256 ---------KKLAEDDKKRFDRELNE----YKKSGGTEYKRGGGKVKVKDENAPKRSMSA 302
Query: 296 YFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
YF F+S+ R + +V E +K G WK +++E K+PYE +A+K+KE+Y EM A
Sbjct: 303 YFFFASDFRKK--HPDLSVTETSKAAGAAWKELSDEMKKPYEAMAQKDKERYQREMAA 358
>gi|71416266|ref|XP_810170.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70874664|gb|EAN88319.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 34/178 (19%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PYIL+ D ++ K++NPE + EI LG W AE +EKY
Sbjct: 121 PYILFGNDHRDKVKEQNPEMKNTEILQSLGKMW----AEASDAVKEKY------------ 164
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPK---KEKDPLKPKHPVTA 295
K L E+ K++ EL E +K+ E K+ K KD PK ++A
Sbjct: 165 ---------KKLAEDDKKRFDRELSE----YKKSGGTEYKRGGGKVKAKDENAPKRSMSA 211
Query: 296 YFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
YF F S+ R + +V E +K G WK +++E K+PYE +A+K+KE+Y EM A
Sbjct: 212 YFFFVSDFRKK--HPDLSVTETSKAAGAAWKELSDEMKKPYEAMAQKDKERYQREMAA 267
>gi|412986109|emb|CCO17309.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 725
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 34/189 (17%)
Query: 173 RKRPSPP------YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKY 226
+K PS P YI +C+ + K+NP EI LG +WK +S +EKKPYE+
Sbjct: 561 KKDPSAPKGAKSAYICFCEKERANIAKDNPNLAATEIMTELGKRWKALSDKEKKPYEK-- 618
Query: 227 QAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDP 286
QAE + R +EAMK E D E + +++KDP
Sbjct: 619 QAETD--------RARFNEAMKNYEPPETD-----------------DDEKQGKRRKKDP 653
Query: 287 LKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK+ +AY +F + +R+ + + ++K+ G+ W + K+PYE++++K+K +
Sbjct: 654 DAPKNAKSAYIIFCAAKRSTIPKETAPKDVMSKL-GQMWSATSVADKKPYEDLSRKDKVR 712
Query: 347 YNEEMEAYK 355
Y +EM YK
Sbjct: 713 YEKEMAKYK 721
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 34/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E +K+NPE F E + +WK +SA +KK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFEDMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+E R+ K K+ +K KDP PK P +A+F
Sbjct: 72 NREMRDYVPPKGF--------------------------GKRGRKRKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R ++ ++ + AK GE W +T+ +K+PYEE A+K +EKY+ +M AY+
Sbjct: 106 VFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLTQSEKQPYEEKAQKLREKYDRDMVAYR 165
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KD KPK +AY F E R + N E +K E WK ++ K+ +E++
Sbjct: 4 KDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFEDM 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +YN EM Y
Sbjct: 64 AKADKVRYNREMRDY 78
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 163 QDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
+ RK+K KRP + ++C + K++ P + LG W ++ EK+PY
Sbjct: 87 RGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLTQSEKQPY 146
Query: 223 EEKYQAEKEAYLQVMAKER 241
EEK Q +E Y + M R
Sbjct: 147 EEKAQKLREKYDRDMVAYR 165
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA-EFKEITNILGAKWKNVSAEEKKPYEEK------- 225
KRP+ + ++ +D KKENP+ + G KWK++S EK PY K
Sbjct: 416 KRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVE 475
Query: 226 YQAEKEAY---LQVMAKERRESE--AMKLLEEEHKQKTAMELLEQYLQF-KQEADKEN-- 277
Y+ +AY L+ KE ES+ ++ +E+ + + E+ E ++ K +A+ +
Sbjct: 476 YEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEVSESIMKGAKSKAETRSTK 535
Query: 278 ----KKPKK-----EKDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEW 325
KKP K KDP KPK P +A+F+F + R + NK+V V K GE+W
Sbjct: 536 LSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKW 595
Query: 326 KNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
K++++ +K PY A K K +Y + M+AY ++++E
Sbjct: 596 KSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEE 630
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K G++WK++++ +K PY A
Sbjct: 410 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 469
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+K K +Y + ++AY ++++E
Sbjct: 470 EKRKVEYEKNIKAYNKKLEE 489
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY +F++E+RA++ +N ++ +V K+ GE WK +T++Q++PYEE
Sbjct: 17 KKKKDPNAPKRGLSAYMIFANEQRASVREENPSITFGQVGKVLGERWKALTDKQRKPYEE 76
Query: 339 IAKKNKEKYNEEMEAYKRRMKE 360
A +K++Y +E AY R++E
Sbjct: 77 KAATDKQRYEDEKAAYNSRLEE 98
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 159 KDKEQDRKKKGCAERKRPSP--------PYILWCKDQWNEAKKENPEAEFKEITNILGAK 210
K+K RK K E+K+ P Y+++ +Q ++ENP F ++ +LG +
Sbjct: 3 KEKSTTRKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRASVREENPSITFGQVGKVLGER 62
Query: 211 WKNVSAEEKKPYEEKYQAEKEAY 233
WK ++ +++KPYEEK +K+ Y
Sbjct: 63 WKALTDKQRKPYEEKAATDKQRY 85
>gi|407850184|gb|EKG04681.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 34/178 (19%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PYIL+ D ++ K++NP + EI LG W AE +EKY
Sbjct: 121 PYILFGNDHRDKVKEQNPGVKNTEILQSLGKMW----AEASDAVKEKY------------ 164
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPK---KEKDPLKPKHPVTA 295
K L E+ K++ EL E +K+ E K+ K KD PK ++A
Sbjct: 165 ---------KKLAEDDKKRFDRELSE----YKKSGGTEYKRGGGKVKAKDENAPKRSMSA 211
Query: 296 YFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
YF F + R + +V E +K G WK +++E K+PYE +A+K+KE+Y EM A
Sbjct: 212 YFFFVGDFRKK--HPDLSVTETSKAAGAAWKELSDEMKKPYEAMAQKDKERYQREMAA 267
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY +F++E+RAA+ +N N+ +V K+ GE WK ++++Q+ PYEE
Sbjct: 18 KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEE 77
Query: 339 IAKKNKEKYNEEMEAYKRRMKE 360
A +K++Y +E AY R +E
Sbjct: 78 KAATDKQRYEDEKAAYNSRQEE 99
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 159 KDKEQDRKKKGCA---ERKRPSPP------YILWCKDQWNEAKKENPEAEFKEITNILGA 209
K+K RK KG ++K P+ P Y+++ +Q ++ENP F ++ +LG
Sbjct: 3 KEKSTARKAKGRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGE 62
Query: 210 KWKNVSAEEKKPYEEKYQAEKEAY 233
+WK +S +++ PYEEK +K+ Y
Sbjct: 63 RWKALSDKQRVPYEEKAATDKQRY 86
>gi|303282319|ref|XP_003060451.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226457922|gb|EEH55220.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 922
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP YIL+ D + +K++PE KEI + L A+W+N S +EK YE K + KEAY
Sbjct: 702 KRPPNAYILFSNDARAKLQKQHPEMSPKEIMSTLAAQWQNASEKEKAKYEAKTKEAKEAY 761
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + E +++ +++ + K KK K++KDP PK P+
Sbjct: 762 -DVASAEYEKNKPAAASDDDDDDDDDDD--------AAAGKKGGKKRKQKKDPNAPKRPL 812
Query: 294 TAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+AY LFS + RA ++ +N + E+ G +WK + + K YE A KEKY+EE
Sbjct: 813 SAYILFSGDARAKVVKENPEMKATEIIAAIGAKWKAIGAKDKAKYEAKATAAKEKYDEEK 872
Query: 352 EAY 354
++Y
Sbjct: 873 KSY 875
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP+ Y+L+ D +E+PE E +LGAKW+ + ++K YE K AEKE Y
Sbjct: 591 RPANAYMLFANDMRAAVAEEHPEMSMVERGKVLGAKWRAIGEKDKARYETKAAAEKERY- 649
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
A+E + + ++ + + K KK+KDP PK P
Sbjct: 650 ---AEEMKHYVPPVVESDDDDDDDTTTTTAEKDADADAPAAKGGKKKKKKDPNAPKRPPN 706
Query: 295 AYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
AY LFS++ RA L + + E+ +W+N +E++K YE K+ KE Y+
Sbjct: 707 AYILFSNDARAKLQKQHPEMSPKEIMSTLAAQWQNASEKEKAKYEAKTKEAKEAYD 762
>gi|71662243|ref|XP_818131.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70883364|gb|EAN96280.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 34/178 (19%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PYIL+ D ++ K++NP + EI LG W AE +EKY
Sbjct: 121 PYILFGNDHRDKVKEQNPGMKNTEILQSLGKMW----AEASDAVKEKY------------ 164
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPK---KEKDPLKPKHPVTA 295
K L E+ K++ EL E +K+ E K+ K KD PK ++A
Sbjct: 165 ---------KKLAEDDKKRFDRELSE----YKKSGGTEYKRGGGKVKAKDENAPKRSMSA 211
Query: 296 YFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
YF F S+ R + +V E +K G WK ++++ K+PYE +A+K+KE+Y EM A
Sbjct: 212 YFFFVSDFRKK--HPDLSVTETSKAAGAAWKALSDDMKKPYEAMAQKDKERYQREMAA 267
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKXAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+ KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKXAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYISPKGETKK------KFKDPNAPKTPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +V K GE W N + K+PYE++A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVVKKLGEMWTNTAADDKQPYEKMAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
K P + L+C + + K E+P ++ LG W N +A++K+PYE EKY
Sbjct: 96 KTPPSAFFLFCSEYRPKIKGEHPGLSIGDVVKKLGEMWTNTAADDKQPYEKMAAKLKEKY 155
Query: 227 QAEKEAY 233
+ + AY
Sbjct: 156 EKDIAAY 162
>gi|290998589|ref|XP_002681863.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
gi|284095488|gb|EFC49119.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
Length = 219
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA---DNKNVLEVAKITGEEWKNMTEEQK 333
KK K+KDP PK P T YFLF E R A A + K+ EV+K+ GE W ++++EQK
Sbjct: 3 GKKSTKKKDPNAPKKPKTGYFLFCDEHREAAKAKTGEKKSASEVSKVLGEMWNSLSDEQK 62
Query: 334 RPYEEIAKKNKEKYNEEMEAYKR 356
+PY + KK+ + YN +ME YK+
Sbjct: 63 KPYNDKYKKSLDGYNAQMEEYKK 85
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA-EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
K+P Y L+C + AK + E E++ +LG W ++S E+KKPY +KY+ +
Sbjct: 16 KKPKTGYFLFCDEHREAAKAKTGEKKSASEVSKVLGEMWNSLSDEQKKPYNDKYKKSLDG 75
Query: 233 YLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHP 292
Y M EE K K + E E+ ++ ++ K +KD PK P
Sbjct: 76 YNAQM-------------EEYKKNKPSSEDEEESDSDGEKKKRKRGSKKAKKDKDAPKRP 122
Query: 293 VTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+T+Y +FS E R LL ++ V EVAK G WK M++EQK+PY A+K K Y +
Sbjct: 123 LTSYMIFSQEMRKKLLEEDSTLKVTEVAKKVGALWKKMSDEQKKPYIAQAEKLKAAYKVQ 182
Query: 351 MEAY 354
E Y
Sbjct: 183 KEEY 186
>gi|16033552|gb|AAL13284.1|AF416953_1 high mobility group protein [Naegleria fowleri]
Length = 209
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 19/177 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA-EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
K+P Y L+C + EAKK+ E E++ ILG W ++ E+KKPY ++Y+ E E
Sbjct: 18 KKPKTAYFLFCDEHREEAKKKAGEGKSASEVSKILGEMWGKLTEEQKKPYNDRYKIEMEK 77
Query: 233 YLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHP 292
+ +VM +E+K+ E + ++E K+ K+ KK+KD PK P
Sbjct: 78 HKKVM--------------DEYKKNKPESEEESEEESEEEGKKKRKRTKKDKDA--PKRP 121
Query: 293 VTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY 347
+++Y LFS ++R LL + V EVAK G W+ M++E+K+PY + A K K++Y
Sbjct: 122 LSSYMLFSQDKRKELLEKDPTLKVTEVAKQVGALWQKMSDEEKKPYNDKAAKLKKEY 178
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
D PK P TAYFLF E R + K+ EV+KI GE W +TEEQK+PY + K
Sbjct: 13 DSNAPKKPKTAYFLFCDEHREEAKKKAGEGKSASEVSKILGEMWGKLTEEQKKPYNDRYK 72
Query: 342 KNKEKYNEEMEAYKR 356
EK+ + M+ YK+
Sbjct: 73 IEMEKHKKVMDEYKK 87
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+L+ +D+ E +++P + E+ +GA W+ +S EEKKPY +K K+ Y
Sbjct: 119 KRPLSSYMLFSQDKRKELLEKDPTLKVTEVAKQVGALWQKMSDEEKKPYNDKAAKLKKEY 178
Query: 234 LQVMAK 239
V AK
Sbjct: 179 EGVKAK 184
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY +F++E+RAA+ +N N+ +V K+ GE WK ++++Q+ PYEE
Sbjct: 17 KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEE 76
Query: 339 IAKKNKEKYNEEMEAYKRR 357
A +K++Y +E AY R
Sbjct: 77 KAATDKQRYEDEKAAYNSR 95
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 159 KDKEQDRKKKGCAERKRPSP--------PYILWCKDQWNEAKKENPEAEFKEITNILGAK 210
K+K RK K E+K+ P Y+++ +Q ++ENP F ++ +LG +
Sbjct: 3 KEKTTARKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGER 62
Query: 211 WKNVSAEEKKPYEEKYQAEKEAY 233
WK +S +++ PYEEK +K+ Y
Sbjct: 63 WKALSDKQRVPYEEKAATDKQRY 85
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY +F++E+RAA+ +N N+ +V K+ GE WK ++++Q+ PYEE
Sbjct: 17 KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEE 76
Query: 339 IAKKNKEKYNEEMEAYKRR 357
A +K++Y +E AY R
Sbjct: 77 KAATDKQRYEDEKAAYNSR 95
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+++ +Q ++ENP F ++ +LG +WK +S +++ PYEEK +K+ Y
Sbjct: 26 KRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAATDKQRY 85
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMARADKVRYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E+ KK KDP PK P +A+F
Sbjct: 76 --------------------------KTYVPPKGESK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + E K+P+E+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTSSEDKQPFEKKAGKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N S+E+K+P+E+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTSSEDKQPFEKKAGKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|112491006|pdb|2GZK|A Chain A, Structure Of A Complex Of Tandem Hmg Boxes And Dna
Length = 159
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 34/184 (18%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP +I+W +DQ + ENP EI+ LG +WK ++ EK P+ ++ Q
Sbjct: 6 KRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQK----- 60
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
LQ M +E+ Y +K ++ + KK KDP PK P
Sbjct: 61 LQAMHREK------------------------YPNYKY---RKGETKKKFKDPNAPKRPP 93
Query: 294 TAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+A+FLF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++
Sbjct: 94 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 153
Query: 352 EAYK 355
AY+
Sbjct: 154 AAYR 157
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKASKLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS + ++C D + K E P ++ LG KW N++AE+K PYE+K KE Y
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKASKLKEKY 154
>gi|72387033|ref|XP_843941.1| high mobility group protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|123380|sp|P26586.1|HMGL_TRYBR RecName: Full=High mobility group protein homolog TDP-1
gi|162109|gb|AAA73081.1| unnamed protein product [Trypanosoma brucei]
gi|62175531|gb|AAX69670.1| high mobility group protein, putative [Trypanosoma brucei]
gi|70800473|gb|AAZ10382.1| high mobility group protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 271
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 32/175 (18%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+L+ DQ E K +NP + I LG W + S + K+ Y +K + +K A+
Sbjct: 125 YLLFVADQREELKAKNPGMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDK-------AR 177
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKE-NKKPKKEKDPLKPKHPVTAYFL 298
RRE + ++K++ KE + K +KD PK +T++
Sbjct: 178 FRREVD----------------------EYKRQGGKEYGRGGKIKKDSNAPKRAMTSFMF 215
Query: 299 FSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
FSS+ R+ + +++E++K G WK + E+++ YEE+A+K+KE+Y EM A
Sbjct: 216 FSSDFRSK--HSDLSIVEMSKAAGAAWKELGPEERKVYEEMAEKDKERYKREMAA 268
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVA--KITGEEWKNMTEEQKRPY 336
KPKK D PK V++Y LF +++R L A N + A + G+ W + +++ K Y
Sbjct: 110 KPKKPAD--YPKPAVSSYLLFVADQREELKAKNPGMQNTAILQTLGKMWSDASDDVKEHY 167
Query: 337 EEIAKKNKEKYNEEMEAYKR 356
+ A+++K ++ E++ YKR
Sbjct: 168 RKKAEEDKARFRREVDEYKR 187
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
ER ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 --ERE--------------------MKTYIPPKGETK------KKFKDPSAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKASKLKEKYEKDIAAYQ 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKASKLKEKY 155
Query: 234 LQVMA 238
+ +A
Sbjct: 156 EKDIA 160
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + + E KK++PEA F E + +WK +SA+EK +E+ L +
Sbjct: 15 YAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A + KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS + ++C D + K E P ++ LG KW N++AE+K PYE+K KE Y
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKY 154
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 284 KDPLKPKHPVTAYFLFSSERR---------AALLADNKNVLEVAKITGEEWKNMTEEQKR 334
KDP KP+ +++Y F RR A++ N E +K E WK M+ ++K
Sbjct: 3 KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASV-----NFSEFSKKCSERWKTMSAKEKG 57
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
+E++AK +K +Y EM +Y
Sbjct: 58 KFEDLAKLDKVRYEREMRSY 77
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 34/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E +K+NPE F E + +WK +SA +KK +E+ +A+K Y
Sbjct: 19 YAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFEDMAKADKVRY---- 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+E R+ K K+ +K KDP PK P +A+F
Sbjct: 75 NREMRDYVPPKGF--------------------------GKRGRKRKDPNAPKRPPSAFF 108
Query: 298 LFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R ++ ++ + AK GE W +++ +K+PYEE A+K +EKY+ +M AY+
Sbjct: 109 VFCSEYRPSVKQQFPGLSIGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAYR 168
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KD KPK +AY F E R + N E +K E WK ++ K+ +E++
Sbjct: 7 KDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFEDM 66
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +YN EM Y
Sbjct: 67 AKADKVRYNREMRDY 81
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 163 QDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
+ RK+K KRP + ++C + K++ P + LG W +S EK+PY
Sbjct: 90 RGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQFPGLSIGDCAKKLGEMWSKLSQSEKQPY 149
Query: 223 EEKYQAEKEAYLQVMAKER 241
EEK Q +E Y + M R
Sbjct: 150 EEKAQKLREKYDRDMVAYR 168
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 36/174 (20%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++PEA F E + +WK +SA+EK +E+ L + K R E E
Sbjct: 25 EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKLDKVRYERE-- 73
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+ Y+ K E K K+ KDP PK P +A+F+F ++ R +
Sbjct: 74 ---------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFFIFCADFRPQV 112
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+ + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+ + K
Sbjct: 113 KGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKASKLKEKYEKDITAYRNKGK 166
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS + ++C D + K E P ++ LG KW N++AE+K PYE+K KE Y
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKASKLKEKY 154
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPHKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PY ++A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWTNTAADDKQPYGKMAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY-------EEKY 226
KRP + L+C + + K E+P ++ LG W N +A++K+PY +EKY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWTNTAADDKQPYGKMAAKLKEKY 155
Query: 227 QAEKEAY 233
+ + AY
Sbjct: 156 EKDIAAY 162
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY +F++E+RAA+ +N N+ +V K+ GE WK ++++Q+ PYEE
Sbjct: 16 KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEE 75
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E AY
Sbjct: 76 KAATDKQRYEDEKAAY 91
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+++ +Q ++ENP F ++ +LG +WK +S +++ PYEEK +K+ Y
Sbjct: 25 KRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAATDKQRY 84
>gi|261327057|emb|CBH10033.1| high mobility group protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 271
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 32/175 (18%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+L+ DQ + K +NP + I LG W + S + K+ Y +K + +K A+
Sbjct: 125 YLLFVADQREDLKAKNPGMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDK-------AR 177
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKE-NKKPKKEKDPLKPKHPVTAYFL 298
RRE + ++K++ KE + K +KD PK +T++
Sbjct: 178 FRREVD----------------------EYKRQGGKEYGRGGKIKKDSNAPKRAMTSFMF 215
Query: 299 FSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
FSS+ R+ + +++E++K G WK + E+++ YEE+A+K+KE+Y EM A
Sbjct: 216 FSSDFRSK--HSDLSIVEMSKAAGAAWKELGPEERKVYEEMAEKDKERYKREMAA 268
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVA--KITGEEWKNMTEEQKRPY 336
KPKK D PK V++Y LF +++R L A N + A + G+ W + +++ K Y
Sbjct: 110 KPKKPAD--YPKPAVSSYLLFVADQREDLKAKNPGMQNTAILQTLGKMWSDASDDVKEHY 167
Query: 337 EEIAKKNKEKYNEEMEAYKR 356
+ A+++K ++ E++ YKR
Sbjct: 168 RKKAEEDKARFRREVDEYKR 187
>gi|397640346|gb|EJK74071.1| hypothetical protein THAOC_04277 [Thalassiosira oceanica]
Length = 337
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 23/182 (12%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+ + ++ +E ENP EF E+T + ++ EE+K +EEK + +K Y
Sbjct: 118 YLFFQNEKRSEFAAENPGMEFGELTRFTSRMYHSLPKEERKVWEEKAKQDKVRY------ 171
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
ESE K + E LLE ++K KK KDP PK P ++Y F
Sbjct: 172 ---ESEKGKYVPPEGHDSNGW-LLES---------SRSRKQKKRKDPNLPKRPRSSYVFF 218
Query: 300 SSERRAALLADNKN----VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+SE R +L + + ++ I GE W+ + E+++ YE +A+ +K ++ EM+ YK
Sbjct: 219 TSEERPKILKEFNDPPLKFTDIGYILGERWRELKPERRKKYEGMAEGDKLRHEREMKEYK 278
Query: 356 RR 357
+R
Sbjct: 279 KR 280
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
+DP PK ++AY LF S R A N ++ E+AK E+ + +QK ++ A
Sbjct: 6 RDPQAPKKSLSAYMLFQSAHREAYRIQNPTWSIGEIAKHASAEYSKLPADQKDAWDRRAD 65
Query: 342 KNKEKYNEEMEAY 354
++++Y +EM+ Y
Sbjct: 66 ADRQRYADEMKTY 78
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+L+ + +NP EI A++ + A++K ++ + A+++ Y
Sbjct: 18 YMLFQSAHREAYRIQNPTWSIGEIAKHASAEYSKLPADQKDAWDRRADADRQRY------ 71
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
++ MK + + F A ++ K ++DP P+ ++AY F
Sbjct: 72 ----ADEMKTYIPPPGYDSRGNSMAG--SFSNRA----RRSKADRDPRAPRKNISAYLFF 121
Query: 300 SSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+E+R+ A+N + E+ + T + ++ +E+++ +EE AK++K +Y E Y
Sbjct: 122 QNEKRSEFAAENPGMEFGELTRFTSRMYHSLPKEERKVWEEKAKQDKVRYESEKGKY 178
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + W E KK++P+A F E + +WK +SA+EK +E+ + +K Y
Sbjct: 16 YAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFEDMAKVDKTRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPLAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + + AK GE W N K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIEGEHPGLSIGDTAKKLGELWNNTAANDKQPYEKEAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 276 ENKKPKKE---KDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTE 330
E KPKKE KDP PK +T + FS+ R + A+N + E+ K+ GE WK M
Sbjct: 539 EGAKPKKERKPKDPNAPKKNLTGFMYFSNANREKVKAENPGIAFGEIGKMLGERWKGMGA 598
Query: 331 EQKRPYEEIAKKNKEKYNEEMEAYKRR 357
++K PYE++A K+K +Y E M+AYK R
Sbjct: 599 DEKAPYEQMAAKDKVRYAEAMKAYKER 625
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 191 AKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
K ENP F EI +LG +WK + A+EK PYE+ +K Y + M
Sbjct: 573 VKAENPGIAFGEIGKMLGERWKGMGADEKAPYEQMAAKDKVRYAEAM 619
>gi|159478607|ref|XP_001697394.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274552|gb|EDP00334.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 255
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM-- 237
++L+ K E+P +F E++ ILG KW + A+EK YE K +K+ YL+ M
Sbjct: 4 FLLFSNAMRAAVKAESPGIDFGEVSKILGEKWARICAKEKAEYEAKAAEDKDRYLREMQE 63
Query: 238 ---AKERRESEAMKLLEEEHKQKTA-MELLEQYLQ-FKQEADKENKK--PKKEKDPLKPK 290
K ESEA ++HK + Y Q +++E E+ + + K PK
Sbjct: 64 YASTKSDSESEARSPSGKKHKGGHVKASAAQAYAQEWRKEPAVESARLGGNERKASGAPK 123
Query: 291 HPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
P+T + FS+ R ++ A+N + E+AK+ GE+W ++ ++K Y + ++K++Y
Sbjct: 124 KPMTPFLHFSNAVRESVKAENPGIAFGELAKVIGEKWAKLSAQEKAEYVKRFDEDKQRYA 183
Query: 349 EEMEAY 354
EM+ Y
Sbjct: 184 REMQDY 189
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 293 VTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+TA+ LFS+ RAA+ A++ + EV+KI GE+W + ++K YE A ++K++Y E
Sbjct: 1 MTAFLLFSNAMRAAVKAESPGIDFGEVSKILGEKWARICAKEKAEYEAKAAEDKDRYLRE 60
Query: 351 MEAY 354
M+ Y
Sbjct: 61 MQEY 64
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 153 PIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWK 212
P V+ + +RK G K+P P++ + K ENP F E+ ++G KW
Sbjct: 104 PAVESARLGGNERKASGAP--KKPMTPFLHFSNAVRESVKAENPGIAFGELAKVIGEKWA 161
Query: 213 NVSAEEKKPYEEKYQAEKEAYLQVM 237
+SA+EK Y +++ +K+ Y + M
Sbjct: 162 KLSAQEKAEYVKRFDEDKQRYAREM 186
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +W+ +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKMRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A + KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAARLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS + ++C D + K E P ++ LG KW N++AE+K PYE+K KE Y
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAARLKEKY 154
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 39/198 (19%)
Query: 169 GCAERKRPS---PPYILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYE 223
G +RK+P Y + + E KK +P+A F E + +WK +SA+EK +E
Sbjct: 2 GKGDRKKPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 224 EKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKE 283
+ +A+K Y E + KT Y+ K E K K
Sbjct: 62 DMAKADKARY-------------------EREMKT-------YIPPKGETKK------KF 89
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP PK P +A+FLF SE R + ++ + +VAK GE W N + K+PYE A
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYERKAA 149
Query: 342 KNKEKYNEEMEAYKRRMK 359
K K KY ++ AY+ + K
Sbjct: 150 KLKGKYEKDTAAYRAKGK 167
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C+D E KK++P F E + +WKN+S++EK +EE + +K Y Q M
Sbjct: 17 FVTTCRD---EHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEELAKTDKIRYDQEM 73
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K ++ KK+KDP PK P +A+F
Sbjct: 74 --------------------------QSYVPPK--GSKVSR--KKKKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F S+ R + DN + ++AK GE W + K PYE A K KEKY +++ AYK
Sbjct: 104 VFCSDHRPKIKEDNPGISIGDIAKKLGELWSTQGPKDKAPYEARAAKLKEKYEKDVAAYK 163
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KD +PK +++Y F + E + N E +K E WKNM+ ++K +EE+
Sbjct: 2 KDHGRPKGKMSSYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEEL 61
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y++EM++Y
Sbjct: 62 AKTDKIRYDQEMQSY 76
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
KRP + ++C D + K++NP +I LG W ++K PYE EKY
Sbjct: 96 KRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWSTQGPKDKAPYEARAAKLKEKY 155
Query: 227 QAEKEAY 233
+ + AY
Sbjct: 156 EKDVAAY 162
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 39/181 (21%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPE F E + +WK +S +EK +E+ QA ++
Sbjct: 19 FVQTCRE---EHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFED--QANQD------ 67
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R ESE + K A +KDP PK P + +F
Sbjct: 68 -KARYESEMTSYGPPGKRGKKA-----------------------KKDPNAPKRPPSGFF 103
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F +E+R + A + + +VAK GE W N+T+ K+PY A K KEKY +++ YK
Sbjct: 104 VFCAEQRPKIKAQHPSFGIGDVAKKLGEAWNNLTDSSKQPYLAKANKLKEKYRKDVADYK 163
Query: 356 R 356
R
Sbjct: 164 R 164
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C +Q + K ++P ++ LG W N++ K+PY K KE Y
Sbjct: 96 KRPPSGFFVFCAEQRPKIKAQHPSFGIGDVAKKLGEAWNNLTDSSKQPYLAKANKLKEKY 155
Query: 234 LQVMAKERRES 244
+ +A +R +
Sbjct: 156 RKDVADYKRGT 166
>gi|340052816|emb|CCC47102.1| putative high mobility group protein [Trypanosoma vivax Y486]
Length = 271
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 29/177 (16%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+++ D + K ENP+A+ EI LG W + S K+ Y++ Q +KE +
Sbjct: 118 KKPLSSYLIFSNDHREKLKAENPDAKITEILQKLGQMWSDASEAVKEKYKKLAQEDKERF 177
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ + E+K+ E F + A +N KD PK V
Sbjct: 178 EREL--------------NEYKKSGGTE-------FSRSAKAKN------KDENAPKRAV 210
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+A+ FS E R+ N ++ E +K G W+ +++E+K+PYE +A+K+KE+Y +E
Sbjct: 211 SAFMFFSKEFRSK--HPNLSMTEGSKAAGAAWRELSDEKKKPYEAMAQKDKERYEKE 265
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P+++Y +FS++ R L A+N + + E+ + G+ W + +E K Y+++A+++KE+
Sbjct: 117 PKKPLSSYLIFSNDHREKLKAENPDAKITEILQKLGQMWSDASEAVKEKYKKLAQEDKER 176
Query: 347 YNEEMEAYKR 356
+ E+ YK+
Sbjct: 177 FERELNEYKK 186
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RK+K KR Y+L+ +++ + K ++P F ++ +LG W + +K+ Y E
Sbjct: 4 RKRKDPNAPKRAMTAYMLFSQEKRTQIKTDHPTVGFGQVGKLLGEAWAALPDGDKRKYNE 63
Query: 225 KYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEK 284
+K Y QK A + E + + E ++ KK +K+K
Sbjct: 64 LAAKDKIRY----------------------QKEAAQYKEDHPESSDEEERPAKK-RKKK 100
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +A+F FS + R + +N + ++ KI GE+W + ++++ +E +A
Sbjct: 101 DPNAPKKPCSAFFHFSKKMRPRIKDENPDASFGQLGKIIGEQWSKLGADERKEFETLAAA 160
Query: 343 NKEKYNEEMEAY 354
+KE+Y +EM+ Y
Sbjct: 161 DKERYAKEMKDY 172
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 34/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E +K+NPE F E + +WK +S +KK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDMAKADKVRYNREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
Y+ K K+ +K KDP PK P +A+F
Sbjct: 76 C--------------------------DYVPPKGFG----KRGRKRKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R ++ ++ + AK GE W +++ +K+PYEE A+K +EKY+ +M AY+
Sbjct: 106 VFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAYR 165
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KD KPK +AY F E R + N E +K E WK ++ K+ +E++
Sbjct: 4 KDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDM 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +YN EM Y
Sbjct: 64 AKADKVRYNREMCDY 78
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 163 QDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
+ RK+K KRP + ++C + K++ P + LG W +S EK+PY
Sbjct: 87 RGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQPY 146
Query: 223 EEKYQAEKEAYLQVMAKER 241
EEK Q +E Y + M R
Sbjct: 147 EEKAQKLREKYDRDMVAYR 165
>gi|154340962|ref|XP_001566434.1| putative high mobility group protein homolog tdp-1 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063757|emb|CAM39944.1| putative high mobility group protein homolog tdp-1 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 299
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 29/177 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PYI++ + + K +NP+ + E+ +G WK +S EK Y++ +K Y + MA
Sbjct: 120 PYIIFVNENREKLKAQNPDMKNTELLAEMGNLWKKISEAEKSRYQKLSDEDKLRYDREMA 179
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFL 298
A+ FK+ K K KEKDP PK +TAYF
Sbjct: 180 AYIARGGAV---------------------FKRGGKKA--KAVKEKDPKAPKRALTAYFF 216
Query: 299 FSSERRAALLADNKNVLEVAKIT--GEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
F+S+ R + + +V ++T G W M+ ++K+PYEE+A K+K++Y E A
Sbjct: 217 FASDYR----SKHADVPAKQQMTEAGAAWGKMSADEKKPYEELAAKDKKRYEAECAA 269
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 68/109 (62%), Gaps = 14/109 (12%)
Query: 260 MELL-EQYLQFKQEADKENKKP--KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV-- 314
MEL Q+L+ + + +N KP KKE+DP PK P+TA+FLFS + R +L N +
Sbjct: 1 MELYCSQFLKGQPVVEIQNDKPEKKKERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDL 60
Query: 315 ---------LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
++++++ G++W++M+E++K+PY + + K KYN++++ Y
Sbjct: 61 SDYQLEVKLIQISQMAGQKWQSMSEQEKQPYVDQYNQAKSKYNDDVKEY 109
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 153 PIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENP---------EAEFKEI 203
P+V+ DK + +K++ KRP + L+ + + + NP E + +I
Sbjct: 13 PVVEIQNDKPEKKKERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQI 72
Query: 204 TNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+ + G KW+++S +EK+PY ++Y K Y
Sbjct: 73 SQMAGQKWQSMSEQEKQPYVDQYNQAKSKY 102
>gi|325303032|tpg|DAA34552.1| TPA_inf: high mobility group protein C [Amblyomma variegatum]
Length = 212
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
KRP +IL+ D KENP E+ + KWK K Y E+Y
Sbjct: 29 KRPPSGFILFAADARKAVLKENPALTPTEVIKTVAGKWKIADEVTKNKYAALSRERFEQY 88
Query: 227 QAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDP 286
+ EK AY ++ ++++E+ A L++ K K L L KE D
Sbjct: 89 EKEKAAYTSILTEQQKEALAEVRLDK--KLKVTKRRLNDKL--------------KELD- 131
Query: 287 LKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
+PK +AY LFS+E R L +K E+ G WK + EE+K+PY A ++K +
Sbjct: 132 -RPKGARSAYVLFSTEMRKKL--QDKPAKEIMAQLGAMWKQLPEEKKQPYLRQADQDKLR 188
Query: 347 YNEEMEAYKRRM 358
Y EEM+A+ +R+
Sbjct: 189 YEEEMKAWSKRL 200
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK P + + LF+++ R A+L +N + EV K +WK E K Y ++++
Sbjct: 25 PPAPKRPPSGFILFAADARKAVLKENPALTPTEVIKTVAGKWKIADEVTKNKYAALSRER 84
Query: 344 KEKYNEEMEAYKRRMKE 360
E+Y +E AY + E
Sbjct: 85 FEQYEKEKAAYTSILTE 101
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 34/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E +K+NPE F E + +WK +S +KK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDMAKADKVRYNREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K+ +K KDP PK P +A+F
Sbjct: 76 --------------------------KDYVPPKGFG----KRGRKRKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R ++ ++ + AK GE W +++ +K+PYEE A+K +EKY+ +M AY+
Sbjct: 106 VFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAYR 165
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KD KPK +AY F E R + N E +K E WK ++ K+ +E++
Sbjct: 4 KDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDM 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +YN EM+ Y
Sbjct: 64 AKADKVRYNREMKDY 78
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 163 QDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
+ RK+K KRP + ++C + K++ P + LG W +S EK+PY
Sbjct: 87 RGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQPY 146
Query: 223 EEKYQAEKEAYLQVMAKER 241
EEK Q +E Y + M R
Sbjct: 147 EEKAQKLREKYDRDMVAYR 165
>gi|296088654|emb|CBI37645.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEE 331
K KK K KDP KPK P +A+F+F E R NK+V V K G++WK+++E
Sbjct: 31 KTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEA 90
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+K PY A+K K +YN+ M+AY +RM E
Sbjct: 91 EKAPYVAKAEKRKTEYNKSMQAYNKRMAE 119
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFEDMAKADKVRYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E KK KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + ++AK GE W N + K PYE A K KEKY +++ AY+
Sbjct: 104 LFCSEFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPYERKAAKLKEKYEKDVAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + +I LG W N + ++K PYE K KE Y
Sbjct: 96 KRPPSAFFLFCSEFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPYERKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDVAAYR 163
>gi|359476973|ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
vinifera]
Length = 156
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEE 331
K KK K KDP KPK P +A+F+F E R NK+V V K G++WK+++E
Sbjct: 33 KTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEA 92
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+K PY A+K K +YN+ M+AY +RM E
Sbjct: 93 EKAPYVAKAEKRKTEYNKSMQAYNKRMAE 121
>gi|359476975|ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
vinifera]
Length = 125
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEE 331
K KK K KDP KPK P +A+F+F E R NK+V V K G++WK+++E
Sbjct: 33 KTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEA 92
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+K PY A+K K +YN+ M+AY +RM+E
Sbjct: 93 EKAPYVAKAEKRKTEYNKSMQAYNKRMEE 121
>gi|340370210|ref|XP_003383639.1| PREDICTED: hypothetical protein LOC100632823 [Amphimedon
queenslandica]
Length = 436
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 150/360 (41%), Gaps = 65/360 (18%)
Query: 39 TPSQSPIPNPPDAGLSKENHESLS------QPKKAAAKGKAKQATKKQDTSFDKDLQEMQ 92
P Q+ P PP + N + LS P A GK + + + T + +QE +
Sbjct: 80 APVQNSSPAPPL--VLSNNAQPLSLPGGQISPLNAVPPGKDRSRPRGRMTPYAFFVQERR 137
Query: 93 EMLEKMKLEKEKT------EELLKE-----KDEMLKMKEEELELQGKEQEKLHMELKKLQ 141
E + + E T L KE K KM E++ E KE H L
Sbjct: 138 EYYRRHGVPVEFTAFSKECSSLWKELKDDEKSRFQKMSEDDKERFRKESASYHASLG--- 194
Query: 142 KMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPP------YILWCKDQWNEAKKEN 195
Q +D R +K RK P P ++ +C ++ + + E+
Sbjct: 195 --------------QPYRDSNSKRGRK----RKEPGQPKRNMCAFLHFCAEKRPKLRVES 236
Query: 196 PEAEFKEITNILGAKWKNVSAEEKKPYEE-------KYQAEKEAY--LQVMAKERRESEA 246
P A + L WK ++ ++K+PYE+ +Y+ +K+AY A ++ +
Sbjct: 237 PAASIGALAKQLSLAWKVMTPDQKRPYEDMAMRDKLRYEQQKQAYEAGYSAAVTQQGAPG 296
Query: 247 MKLLEEEHKQKTAMELLEQYLQFK---QEADKENKKP-----KKEKDPLKPKHPVTAYFL 298
T+ L A + +KP +K KDP PK ++A+
Sbjct: 297 TGGGGGGGANSTSSAPAAPTLGNAAALSRAQFDGQKPIYHPRRKRKDPDMPKRNMSAFMF 356
Query: 299 FSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
+S +R L A N V ++A+I +WK M+ +K+ ++++A+K+KE+Y +++AY++
Sbjct: 357 YSKAKRPHLRAQNMTLRVGQLAQILAAQWKIMSPSEKKQFDDMARKDKERYEMQLKAYRK 416
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +++ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQDMAKADKVHY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAILKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 TKGK 167
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAILKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 35/183 (19%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
+ PY + K + E KK+ P + E++ AKWK ++ Q EK +
Sbjct: 41 TTPYGFFVKMCYEEHKKKYPNENVQVTEVSKKCSAKWKTMT-----------QEEKHRFY 89
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
++ AK+R +A LE Y D K+ + +KDP PK ++
Sbjct: 90 ELAAKDRVRYDAE---------------LEAY-----GGDGLRKRKRSKKDPNAPKRALS 129
Query: 295 AYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
A+F FS+ +RA + + + V +VA+ G WK + E++KR +E++A K++ +Y E+M+
Sbjct: 130 AFFFFSNSKRAEIQQAHPDWKVGQVAQELGRMWKAIDEDEKRKFEDMAAKDRTRYEEDMK 189
Query: 353 AYK 355
YK
Sbjct: 190 NYK 192
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 288 KPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
KP+ T Y F E + +N V EV+K +WK MT+E+K + E+A K+
Sbjct: 36 KPRGKTTPYGFFVKMCYEEHKKKYPNENVQVTEVSKKCSAKWKTMTQEEKHRFYELAAKD 95
Query: 344 KEKYNEEMEAY 354
+ +Y+ E+EAY
Sbjct: 96 RVRYDAELEAY 106
>gi|255074119|ref|XP_002500734.1| high-mobility protein [Micromonas sp. RCC299]
gi|226515997|gb|ACO61992.1| high-mobility protein [Micromonas sp. RCC299]
Length = 153
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P++AY +F+ ERR+A++A+N + EV K G WK + E+K +E AKK
Sbjct: 74 DPNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKK 133
Query: 343 NKEKYNEEMEAY 354
+KE+Y EMEAY
Sbjct: 134 DKERYAVEMEAY 145
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
K+P YI++ K++ + ENP E+T LGA+WK + AEEK +E E+Y
Sbjct: 79 KKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKKDKERY 138
Query: 227 QAEKEAY 233
E EAY
Sbjct: 139 AVEMEAY 145
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPE F E + +W+++S +EK +E+ +A+K Y
Sbjct: 19 FVQTCRE---EHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFEDLAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + KK K+ KDP PK P + +F
Sbjct: 72 -------------DREMKDFGPV-----------------KKGKRNKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + ++AK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDIAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNK----NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP KPK ++AY F R N N E +K E W++M+ ++K +E++
Sbjct: 4 RDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM+ +
Sbjct: 64 AKADKVRYDREMKDF 78
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP +I LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDIAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 153
Query: 234 LQVMA 238
+ +A
Sbjct: 154 EKDVA 158
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERR---AALLADN--KNVLEVAKITGEEWKNMTEE 331
KK K+KDP PK P T +FLF ERR A L + K+ EV+K+ GEEW +T+
Sbjct: 3 GKKSSKKKDPNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDS 62
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKR 356
+K Y ++KKN E Y ++ E YK+
Sbjct: 63 EKDKYNSVSKKNMEVYKKQFEEYKK 87
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 19/186 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFK---EITNILGAKWKNVSAEEKKPYEEKYQAEK 230
KRP + L+C ++ + K E E K E++ +LG +W ++ EK +KY +
Sbjct: 16 KRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDSEK----DKYNSVS 71
Query: 231 EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPK 290
+ ++V K+ EE+K+ E + A K+ KK K +KD PK
Sbjct: 72 KKNMEVYKKQF----------EEYKKNKPESSDESESSDDEGAKKKKKKRKAKKDENAPK 121
Query: 291 HPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
P+++Y LFS R +L+A+N V EVAK+ GE+W M + +K PY A + K YN
Sbjct: 122 RPLSSYMLFSQTYRKSLVAENPTLKVTEVAKLVGEKWGKMNDAEKAPYVNKAAELKAAYN 181
Query: 349 EEMEAY 354
E Y
Sbjct: 182 IEKSKY 187
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP PK +TA+ FS+ +R + DN V EV K+ GE+WK++ +K YEE AK
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGVSFGEVGKLLGEKWKSLGANEKSEYEEKAK 135
Query: 342 KNKEKYNEEMEAYK 355
K+KE+Y +EMEAYK
Sbjct: 136 KDKERYAKEMEAYK 149
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 174 KRPSPP------YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQ 227
K P+ P ++ + Q ++ K +NP F E+ +LG KWK++ A EK YEEK +
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGVSFGEVGKLLGEKWKSLGANEKSEYEEKAK 135
Query: 228 AEKEAYLQVM 237
+KE Y + M
Sbjct: 136 KDKERYAKEM 145
>gi|255074117|ref|XP_002500733.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
gi|226515996|gb|ACO61991.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
Length = 646
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P++AY +F+ ERR+A++A+N + EV K G WK + E+K +E AKK
Sbjct: 567 DPNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKK 626
Query: 343 NKEKYNEEMEAY 354
+KE+Y EMEAY
Sbjct: 627 DKERYAVEMEAY 638
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
K+P YI++ K++ + ENP E+T LGA+WK + AEEK +E E+Y
Sbjct: 572 KKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKKDKERY 631
Query: 227 QAEKEAY 233
E EAY
Sbjct: 632 AVEMEAY 638
>gi|342180310|emb|CCC89787.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 266
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 38/175 (21%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
+IL+ + ++ K NPE + E+ LG W + S + K+ Y
Sbjct: 120 FILFAAEHRDKVKAANPEMKSTELFQELGKMWNDASEKVKEKY----------------- 162
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
K L +E K + E+ E +Q +E ++ K +KD PK P+T++ F
Sbjct: 163 --------KNLADEDKARFDREVSEYKMQGGKEY---SRSAKVKKDEGAPKRPMTSFMHF 211
Query: 300 SSERRAALLADNKN----VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
S E R NKN V++V++ G WK ++EE+++PY+++A+++KE+Y+ E
Sbjct: 212 SKEFR------NKNKGGGVVDVSRAAGAAWKELSEEERKPYQDMAQRDKERYDRE 260
>gi|380471591|emb|CCF47205.1| HMG box protein [Colletotrichum higginsianum]
Length = 513
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L N E+AK+ GE W+N+T +K
Sbjct: 104 KYRRHPKPDEN--APERPPSAYVLFSNKMRDDLKGRNLTFTEIAKLVGEHWQNLTPGEKE 161
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE A K KEKYN ++ YK+
Sbjct: 162 PYESSALKAKEKYNHDLAEYKK 183
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ ++ K N F EI ++G W+N++ EK+PYE KE Y
Sbjct: 118 RPPSAYVLFSNKMRDDLKGRN--LTFTEIAKLVGEHWQNLTPGEKEPYESSALKAKEKYN 175
Query: 235 QVMAKERRESEAMK 248
+A+ ++ +E K
Sbjct: 176 HDLAEYKKTAEYRK 189
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEE 338
+ +KDP PK ++AY FS+ +RA + A N V +VAK GE+WK +T+E+K Y++
Sbjct: 515 RAKKDPNAPKRGLSAYMFFSAAKRAEITAANPSFGVTDVAKALGEKWKTITDEEKSVYQQ 574
Query: 339 IAKKNKEKYNEEMEAYK 355
A ++K +Y EMEAY+
Sbjct: 575 QADEDKIRYEREMEAYR 591
>gi|310790717|gb|EFQ26250.1| HMG box protein [Glomerella graminicola M1.001]
Length = 500
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L N E+AK+ GE W+N+T +K
Sbjct: 104 KYRRHPKPDEN--APERPPSAYVLFSNKMRDDLKGRNLTFTEIAKLVGEHWQNLTPGEKE 161
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE A K KEKYN ++ YK+
Sbjct: 162 PYETSALKAKEKYNHDLAEYKK 183
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ ++ K N F EI ++G W+N++ EK+PYE KE Y
Sbjct: 118 RPPSAYVLFSNKMRDDLKGRN--LTFTEIAKLVGEHWQNLTPGEKEPYETSALKAKEKYN 175
Query: 235 QVMAKERRESE 245
+A+ ++ +E
Sbjct: 176 HDLAEYKKTAE 186
>gi|158297853|ref|XP_318023.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|158297857|ref|XP_001689081.1| AGAP004789-PA [Anopheles gambiae str. PEST]
gi|157014526|gb|EAA13138.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|157014528|gb|EDO63498.1| AGAP004789-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 270 KQEADKENKKPKKE--KDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEW 325
KQ A K KK +++ KD PKHP+T Y + +E R + + N+ +EV KI EEW
Sbjct: 53 KQSAPKTTKKKRQKAPKDANAPKHPLTGYVRYMNEHREGVRQKHPNLTPIEVTKIMAEEW 112
Query: 326 KNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
++EE+K+PY E A+ +KE+YN+E+ YK
Sbjct: 113 SKLSEERKKPYLEAAEVDKERYNKEISEYK 142
>gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
Length = 139
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R DN++V V K GE+WK+MT+ +K PY + A+
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAE 93
Query: 342 KNKEKYNEEMEAYKRRM 358
K K +YN++M+AY ++
Sbjct: 94 KRKSEYNKKMQAYNLKL 110
>gi|320169908|gb|EFW46807.1| hypothetical protein CAOG_04765 [Capsaspora owczarzaki ATCC 30864]
Length = 686
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 34/208 (16%)
Query: 163 QDRKKKGCAER-----KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAE 217
+ R+KK E+ KRP Y L+ K + K++ + +EI +++ +WK +
Sbjct: 227 RGRRKKDAMEKDPNAPKRPPNGYALFVKRRRESLKQKRTDLSVQEIISLIAKEWKELPPA 286
Query: 218 EKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN 277
+KK +E R++EA+ + K K ME +YL E K
Sbjct: 287 KKKEFE------------------RQAEALLV-----KYKADME---EYLAEHPEMAKVA 320
Query: 278 K-KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKR 334
K + K E+ P +P P TA+ FS + RAA+ N NV ++A++ GE WKN+TE+Q+
Sbjct: 321 KNRQKSERLPGEPHRPATAFIKFSEKHRAAVREQNPNVPYKDIARLLGERWKNLTEDQRE 380
Query: 335 PYEEIAKKNKEKYNEEMEAYKRRMKELL 362
+++ + + KY +E+E++ EL+
Sbjct: 381 KFKKSYENDVRKYQKELESFNAANPELV 408
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 37/191 (19%)
Query: 171 AERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEE----KKPYE--- 223
E RP+ +I + + +++NP +K+I +LG +WKN++ ++ KK YE
Sbjct: 331 GEPHRPATAFIKFSEKHRAAVREQNPNVPYKDIARLLGERWKNLTEDQREKFKKSYENDV 390
Query: 224 EKYQAEKEAY----------LQVMAKERRESEAMK----LLEEEHKQKTAMELLEQYLQF 269
KYQ E E++ + KER+ S A K + H+ K L +
Sbjct: 391 RKYQKELESFNAANPELVAQREAARKERKTSRASKGDGGDDGDSHRPKRPSRLTPEM--- 447
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKN 327
D + P+ +T Y F R LAD++ + ++ K GE+W +
Sbjct: 448 ---TDLLERLPQVTG--------ITPYLQFVKSTRETYLADHEGIKFSDLQKQLGEKWSS 496
Query: 328 MTEEQKRPYEE 338
+ +K +E+
Sbjct: 497 LNAREKAYWED 507
>gi|299741148|ref|XP_001834261.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
gi|298404577|gb|EAU87573.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
Length = 184
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEE 338
K +KDPLKPK ++AY FS + R + A+N EV K+ G +WK + EE+K+PY E
Sbjct: 88 KSKKDPLKPKRALSAYMFFSQDWRERIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYIE 147
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
+A K+KE+ E AY + +K
Sbjct: 148 LANKDKERAENEKSAYDKGIK 168
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY-------EEKY 226
KR Y+ + +D K ENP+A F E+ +LGAKWK + EEKKPY +E+
Sbjct: 97 KRALSAYMFFSQDWRERIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYIELANKDKERA 156
Query: 227 QAEKEAYLQVMAKERRES 244
+ EK AY + + K R S
Sbjct: 157 ENEKSAYDKGIKKSRANS 174
>gi|449464956|ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
Length = 207
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKR 334
KK KK+KDP PK P TA+F+F + R + D+K V EVAK GE+WK+MT+E+K+
Sbjct: 100 KKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKK 159
Query: 335 PYEEIAKKNKEKYNEEMEA 353
PY++ A + K +Y + +E+
Sbjct: 160 PYQDKAAELKAEYEKALES 178
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAE-FKEITNILGAKWKNVSAEEKKPYEEK 225
KRP + ++ D K+ NP+++ KE+ G KWK+++ EEKKPY++K
Sbjct: 112 KRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDK 164
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 39/180 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFEDMAKADKVRYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E KK KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + ++AK GE W N + K P+E A K KEKY +++ AY+
Sbjct: 104 LFCSEFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPFERKAAKLKEKYEKDVAAYR 163
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + +I LG W N + ++K P+E K KE Y
Sbjct: 96 KRPPSAFFLFCSEFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPFERKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDVAAYR 163
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F ++ R D NK+V V K GEEWK+++EE+K PY + A
Sbjct: 40 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 99
Query: 341 KKNKEKYNEEMEAYKRRM 358
K KE+Y ++AY +++
Sbjct: 100 LKKKEEYEITLQAYNKKL 117
>gi|429855216|gb|ELA30184.1| hmg box protein [Colletotrichum gloeosporioides Nara gc5]
Length = 468
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L N E+AK+ GE W+N+T +K
Sbjct: 104 KYRRHPKPDEN--APERPPSAYVLFSNKMRDELKGRNLTFTEIAKLVGEHWQNLTPAEKE 161
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE A K KEKYN ++ YK+
Sbjct: 162 PYETSALKAKEKYNHDLAEYKK 183
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ +E K N F EI ++G W+N++ EK+PYE KE Y
Sbjct: 118 RPPSAYVLFSNKMRDELKGRN--LTFTEIAKLVGEHWQNLTPAEKEPYETSALKAKEKYN 175
Query: 235 QVMAKERRESEAMK 248
+A+ ++ E K
Sbjct: 176 HDLAEYKKTPEFRK 189
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 36/174 (20%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 26 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY-------------- 71
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
E + KT Y+ K E K K KDP PK P +A+FLF SE R +
Sbjct: 72 -----EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFFLFCSEYRPKI 113
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
++ + +VAK GE W N K+PY + A K KEKY +++ AY+ + K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAVYDKQPYGKKAAKLKEKYEKDIAAYRAKGK 167
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N + +K+PY +K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAVYDKQPYGKKAAKLKEKY 155
Query: 234 LQVMAKERRESEAM 247
+ +A R + + M
Sbjct: 156 EKDIAAYRAKGKLM 169
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F+++ R A+ ADN + +V K GE+WK +T+ +K PYEE A
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATA 80
Query: 343 NKEKYNEEMEAYKRRMKEL 361
+K++Y +E AYK E
Sbjct: 81 DKKRYEDEKAAYKANAAEF 99
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + D + + +NP F ++ LG KWK ++ EK PYEEK A+K+ Y
Sbjct: 26 KRALSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATADKKRY 85
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQK 333
E K KKEKDP PK P++AY +S ++R + DN + E+ KI G +WK++ E +K
Sbjct: 34 EKKSGKKEKDPNAPKRPLSAYMFYSQDKRTQVKEDNPDASFGELGKILGAQWKDLDESEK 93
Query: 334 RPYEEIAKKNKEKYNEEMEAY 354
+ Y ++A ++KE+Y AY
Sbjct: 94 KQYNDMATRDKERYTNAKAAY 114
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+ + +D+ + K++NP+A F E+ ILGA+WK++ EKK Y + +KE Y
Sbjct: 48 KRPLSAYMFYSQDKRTQVKEDNPDASFGELGKILGAQWKDLDESEKKQYNDMATRDKERY 107
Query: 234 LQVMA 238
A
Sbjct: 108 TNAKA 112
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCQEEKKKKHPDASVNFSEFSKTCSERWKTISAKEKGKFEDMVKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
ER ++ Y+ K E KK KD PK +A+F
Sbjct: 72 --ERE--------------------MKTYIPPKGETK------KKFKDLNAPKRTPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAVKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRTPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAVKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|302652822|ref|XP_003018251.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
gi|291181876|gb|EFE37606.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
Length = 132
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY +F++E+RAA+ +N N+ +V K+ GE WK ++++Q+ PYEE A
Sbjct: 60 DPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAAT 119
Query: 343 NKEKYNEEMEAY 354
+K++Y +E AY
Sbjct: 120 DKQRYEDEKAAY 131
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+++ +Q ++ENP F ++ +LG +WK +S +++ PYEEK +K+ Y
Sbjct: 65 KRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAATDKQRY 124
>gi|449456873|ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R +NK+V V K G++WK+M++ +K PY A+
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAE 93
Query: 342 KNKEKYNEEMEAYKRRM 358
K K +YN+ M+AY +R+
Sbjct: 94 KRKTEYNKSMQAYNKRI 110
>gi|384490121|gb|EIE81343.1| hypothetical protein RO3G_06048 [Rhizopus delemar RA 99-880]
Length = 286
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 151 TLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAK 210
+P + CLK K + + K KRP Y+L+ +D + N EI+ +
Sbjct: 40 VIPNLTCLKQKYDNHQPKKV---KRPPNAYLLFNRDM--RRQMNNQGMTSGEISKNISQI 94
Query: 211 WKNVSAEEKKPY-------EEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELL 263
WK +S EE+ Y +++Y + Y + E +++ +K L++ + T + L
Sbjct: 95 WKQLSNEERNKYFKEESELKQQYNSSNFVYFRRSKAELQQAGLLKKLQKSNSTTTQHQQL 154
Query: 264 EQY-----LQFKQEA---------DKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
+ + +K+ + D +K KK D PKHP++AY F+ R +
Sbjct: 155 QLQQSKKKVYYKKGSKTTDESSIPDPRGRKKKKSTDTSLPKHPMSAYLHFAKTMRPIIKK 214
Query: 310 DNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
++ N ++E+++ G +W++MTE + RP+ E+A ++K +Y EM
Sbjct: 215 NSPNSKLVEISQQIGLKWRSMTENEMRPWIEMANEDKARYAREM 258
>gi|224081483|ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
gi|222855878|gb|EEE93425.1| high mobility group family [Populus trichocarpa]
Length = 144
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F + R +NK+V V K G++WK+++E +K PY
Sbjct: 31 KAAKDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPYA 90
Query: 338 EIAKKNKEKYNEEMEAYKRRM 358
A+K K +YN++M AY +R+
Sbjct: 91 AKAEKRKFEYNKDMAAYNKRL 111
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 39/179 (21%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E K +NPE F E + +WK +S +EK +E+ QA+++
Sbjct: 19 FVQTCRE---EHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFED--QAKQD------ 67
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R +SE + K A+ KDP PK P + +F
Sbjct: 68 -KARYDSEMTSYGPPGKRGKKAL-----------------------KDPNAPKRPPSGFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+F +E+R + A + N + +VAK GE W N+T+ K+PY A K KEKY +++ Y
Sbjct: 104 VFCAEQRPKIKAQHPNFGIGDVAKKLGEMWNNLTDSNKQPYLAKANKLKEKYQKDVADY 162
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 39/179 (21%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E K +NPE F E + +WK +S +EK +E+ QA+++
Sbjct: 19 FVQTCRE---EHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFED--QAKQD------ 67
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R +SE + K A+ KDP PK P + +F
Sbjct: 68 -KARYDSEMTSYGPPGKRGKKAL-----------------------KDPNAPKRPPSGFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+F +E+R + A + N + +VAK GE W N+T+ K+PY A K KEKY +++ Y
Sbjct: 104 VFCAEQRPKIKAQHPNFGIGDVAKKLGEMWNNLTDSNKQPYLAKANKLKEKYQKDVADY 162
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 38/180 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E K +NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 30 YAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRY---- 85
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+E ++ E+ K KK+KDP PK P + +F
Sbjct: 86 GREMKDYESA------------------------------KGGKKKKDPNAPKRPPSGFF 115
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +V K GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 116 LFCSEFRPKIKSANPGISIEDVVKKLGEMWNNLSDSEKQPYMTKAAKLKEKYEKDVADYK 175
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP +++ LG W N+S EK+PY K KE Y
Sbjct: 108 KRPPSGFFLFCSEFRPKIKSANPGISIEDVVKKLGEMWNNLSDSEKQPYMTKAAKLKEKY 167
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQK 333
KK K +KDP PK P++A+ FS ++R ++ N + EV K+ GE W +++ QK
Sbjct: 9 KKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQK 68
Query: 334 RPYEEIAKKNKEKYNEEMEAYKRRMK 359
+PYE A +K +Y EM AYK+ K
Sbjct: 69 KPYESKAVADKARYEREMIAYKKGGK 94
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKE 231
KRP +I + KD+ E ++NPE ++ E+ ++G W +S +KKPYE K A+K
Sbjct: 21 KRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYESKAVADKA 80
Query: 232 AY 233
Y
Sbjct: 81 RY 82
>gi|359484115|ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera]
gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEE 331
K++++ +K KDP PK P TA+FLF + R D+KNV VAK GE+WK+MT+E
Sbjct: 85 KKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNVSVVAKEGGEKWKSMTDE 144
Query: 332 QKRPYEEIAKKNKEKYNEEMEAY 354
+K+PY + A + K +Y++ ME Y
Sbjct: 145 EKKPYVDKAAELKAEYDKAMETY 167
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKR 334
K+ KKEKDP PK P++AY FS + R + +N +V E+ ++ G +WK ++EE+K+
Sbjct: 24 TKRVKKEKDPNAPKRPLSAYMYFSQDWRERIKTENPDVSFGEIGRLLGLKWKGLSEEEKK 83
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE++A ++K+++ E Y+R
Sbjct: 84 PYEDMASRDKKRHEAEKAEYER 105
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
KRP Y+ + +D K ENP+ F EI +LG KWK +S EEKKPYE+ ++
Sbjct: 37 KRPLSAYMYFSQDWRERIKTENPDVSFGEIGRLLGLKWKGLSEEEKKPYEDMASRDKKRH 96
Query: 227 QAEKEAY 233
+AEK Y
Sbjct: 97 EAEKAEY 103
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 30/175 (17%)
Query: 190 EAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++PE F+E + +WK +S +EKK + E AEK+ K+R ++E
Sbjct: 283 EHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHE--MAEKD-------KKRYDAE-- 331
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA- 306
++ Y K E+ KK K KD PK ++A+F F ++ R
Sbjct: 332 ---------------MQNYTPPKGESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKV 376
Query: 307 -LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+L V ++AK G++W + E K YE +A+K+K +Y EM AYK++MK+
Sbjct: 377 KMLNPEFGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMKD 431
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F S+ R D NK+V V K GE WK+M+EE K PY
Sbjct: 29 KAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKSVAAVGKACGEAWKSMSEEDKAPYA 88
Query: 338 EIAKKNKEKYNEEMEAYKRRM 358
A K KE+Y +AY +++
Sbjct: 89 ARALKKKEEYEVATQAYNKKL 109
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKR 334
K K KDP KPK P +A+F+F E R + NK+V V K G++WK+++E +KR
Sbjct: 28 KSGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEKR 87
Query: 335 PYEEIAKKNKEKYNEEMEAYKRRMKE 360
PY + A+K K +Y + M+AY +R E
Sbjct: 88 PYVDKAEKRKVEYEKNMKAYNKRQAE 113
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 30/175 (17%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++PE + F+E + WK +S +EKK + E AEK+ K+R ++E
Sbjct: 260 EYKKKHPEEKIVFREFSKKCAMSWKTMSDKEKKRFHE--MAEKD-------KKRYDAE-- 308
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA- 306
++ Y K E+ KK K KD PK ++A+F F S+ R
Sbjct: 309 ---------------MQNYTPPKGESKGRGKKRKHIKDLNAPKRSLSAFFWFCSDERGKV 353
Query: 307 -LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+L V ++AK G++W + E K YE +A+K+K +Y EM AYK++MK+
Sbjct: 354 KMLNPEFGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMKD 408
>gi|156369656|ref|XP_001628091.1| predicted protein [Nematostella vectensis]
gi|156215058|gb|EDO36028.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 28/178 (15%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y + +DQ + ++E + + + + KWKN+S EEK+ + +K +KE + + M
Sbjct: 10 YNFFLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAGKDKERFKEEM-- 67
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
+ Y E + K+ K+ KDP KPK ++AYF F
Sbjct: 68 ------------------------QSYTPPPSEESGKKKRKKQTKDPNKPKRCLSAYFHF 103
Query: 300 SSERRAALLADNKNVLEVA--KITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+ +R + DN N A K+ GE W MT++ K Y+++AKK+K +Y EM+A+K
Sbjct: 104 INLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQYQDMAKKDKVRYESEMKAFK 161
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 288 KPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
KPK +AY F ++R L + ++ + +K++ E+WKNM+EE+K + + A K+KE
Sbjct: 2 KPKGAKSAYNFFLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAGKDKE 61
Query: 346 KYNEEMEAY 354
++ EEM++Y
Sbjct: 62 RFKEEMQSY 70
>gi|156057705|ref|XP_001594776.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980]
gi|154702369|gb|EDO02108.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY +FS++ R L N + E+AK+ GE W+N++ +K
Sbjct: 105 KYRRHPKTDEN--APERPPSAYVIFSNKMREDLKGRNLSFTEIAKLVGENWQNLSPAEKE 162
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE+ A K KE+YN E+ YK+
Sbjct: 163 PYEQSAYKAKERYNNELAEYKK 184
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+++ + K N F EI ++G W+N+S EK+PYE+ KE Y
Sbjct: 119 RPPSAYVIFSNKMREDLKGRN--LSFTEIAKLVGENWQNLSPAEKEPYEQSAYKAKERYN 176
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYL-QFKQEADKENKKPKKEKD 285
+A E+K+ + + QYL FKQ K+N++ E D
Sbjct: 177 NELA--------------EYKKTQSFKDYSQYLADFKQ---KQNQQLATEMD 211
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK+ +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ + +VAK GE W N E K+PY + A K KEK+ + + AY+
Sbjct: 104 LFCSEYCPKIKGEHPGLSIGDVAKKLGELWNNTAAEDKQPYGKKAAKLKEKHEKGIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E WK M+ ++KR +E++A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y EM+ Y
Sbjct: 65 KADKARYEREMKTY 78
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +AE+K+PY +K KE +
Sbjct: 96 KRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKKLGELWNNTAAEDKQPYGKKAAKLKEKH 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKGIAAYR 163
>gi|427777853|gb|JAA54378.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 290
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
KRP +IL+ D KENP E+ + KWK + Y E+Y
Sbjct: 87 KRPPSGFILFAADTRKTVLKENPALTPTEVIKAVAGKWKTADDVTRNKYAALARERFEQY 146
Query: 227 QAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDP 286
+ EK AY + +++RE A++ + + K K L L KE D
Sbjct: 147 EKEKAAYTSQLTEQQRE--ALEEVRLDKKLKITKRRLNDKL--------------KELD- 189
Query: 287 LKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
KPK +AY LFS+E R L +K EV G WK + EE+K+PY A ++K +
Sbjct: 190 -KPKAAQSAYVLFSNEMRKKL--QDKPPKEVMTQLGAMWKQLPEEKKQPYLHKADEDKLR 246
Query: 347 YNEEMEAYKRRM 358
Y EM+A+ +R+
Sbjct: 247 YEREMKAWSQRL 258
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P + + LF+++ R +L +N + EV K +WK + + Y +A++ E+
Sbjct: 86 PKRPPSGFILFAADTRKTVLKENPALTPTEVIKAVAGKWKTADDVTRNKYAALARERFEQ 145
Query: 347 YNEEMEAYKRRMKE 360
Y +E AY ++ E
Sbjct: 146 YEKEKAAYTSQLTE 159
>gi|384499401|gb|EIE89892.1| hypothetical protein RO3G_14603 [Rhizopus delemar RA 99-880]
Length = 352
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 17/185 (9%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ K K ++P EI+ + +W+ +S EEK E Y+
Sbjct: 96 RPPNAYLLFNKKMRRVLKDQDPTMNVGEISKQIAERWRKMSKEEK-----------EMYV 144
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQE-ADKENKK--PKKEKDPLKPKH 291
+ ++E A+ + +++ EL E K+E +DK+ + KK K P PKH
Sbjct: 145 NEANRLKQEQRALHP-NSMYIRRSRAELKEAGKMIKEEPSDKKTARRVKKKIKSPGIPKH 203
Query: 292 PVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P++AY + +E R + + NV +++K E+W MT+E++ P++ A+ +KE+Y
Sbjct: 204 PLSAYMWYLTEVRPKTMKSFPSSNVGQISKYCAEKWHTMTDEERAPWKTKAQVDKERYAR 263
Query: 350 EMEAY 354
EM+ Y
Sbjct: 264 EMQLY 268
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 41/180 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +W+ +SA+EK +E+ + +K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFEDMAKGDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K KK KDP PK P +A+F
Sbjct: 76 --------------------------KNYI--------PPKGVKKRKDPNAPKRPPSAFF 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +D+ + + AK GE W T + K P+E+ A K KEKY++++ AY+
Sbjct: 102 LFCSEHRPKIKSDHPGLSIGDTAKKLGEMWSLQTAKDKLPFEQKALKLKEKYDKDIAAYR 161
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E W+ M+ ++K +E++A
Sbjct: 5 DPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFEDMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y+ EM+ Y
Sbjct: 65 KGDKARYDREMKNY 78
>gi|444722008|gb|ELW62714.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK VSA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTVSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPLKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 FFCSEYRPKIKGEHPGLSIGDVAKKLGEMWSNTAADAKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 30/175 (17%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++PE + F+E + +WK +S +EKK + E AEK+ K+R ++E
Sbjct: 247 EHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHE--MAEKD-------KKRYDAE-- 295
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA- 306
++ Y K E+ KK K KD PK ++A+F F ++ R
Sbjct: 296 ---------------MQNYTPPKGESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKV 340
Query: 307 -LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+L V ++AK G++W + E K YE +A+K+K +Y EM AYK++MK+
Sbjct: 341 KMLNPEFGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMKD 395
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQK 333
KK K +KDP PK P++A+ FS ++R ++ N + EV K+ GE W +++ QK
Sbjct: 217 KKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQK 276
Query: 334 RPYEEIAKKNKEKYNEEMEAYKR 356
+PYE A +K +Y EM AYK+
Sbjct: 277 KPYESKAVADKARYEREMIAYKK 299
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKE 231
KRP +I + KD+ E ++NPE ++ E+ ++G W +S +KKPYE K A+K
Sbjct: 229 KRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYESKAVADKA 288
Query: 232 AY 233
Y
Sbjct: 289 RY 290
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
ER E+ Y+ K E K K KDP PK P +A+F
Sbjct: 72 --ER-------------------EMKTSYIPPKGETKK------KFKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 105 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 97 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 156
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 157 EKDIAAYR 164
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
Length = 101
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+++KDP PK ++AY F++E R + A+N N+ +V K+ GE+WK +T E+K PYE
Sbjct: 12 RRKKDPNAPKRGLSAYMFFANENRDIVKAENPNITFGQVGKVLGEKWKALTAEEKEPYEA 71
Query: 339 IAKKNKEKYNEEMEAY 354
AK +K++Y E E Y
Sbjct: 72 KAKADKKRYESEKELY 87
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R+KK KR Y+ + + + K ENP F ++ +LG KWK ++AEEK+PYE
Sbjct: 12 RRKKDPNAPKRGLSAYMFFANENRDIVKAENPNITFGQVGKVLGEKWKALTAEEKEPYEA 71
Query: 225 K-------YQAEKEAYL--QVMAKERRE 243
K Y++EKE Y+ QV A + E
Sbjct: 72 KAKADKKRYESEKELYMATQVHADDEEE 99
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F++E+R + DN + EV K GE+WK ++E+QK PYE
Sbjct: 22 KKKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIKFGEVGKQLGEKWKGLSEKQKAPYEA 81
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y EE AY
Sbjct: 82 KAAADKKRYEEEKAAY 97
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ + +NP +F E+ LG KWK +S ++K PYE K A+K+ Y
Sbjct: 31 KRGLSAYMFFANEQRDKVRDDNPGIKFGEVGKQLGEKWKGLSEKQKAPYEAKAAADKKRY 90
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SAEEK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E KK KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|449685055|ref|XP_002156373.2| PREDICTED: high mobility group protein homolog TDP-1-like, partial
[Hydra magnipapillata]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 44/188 (23%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA-EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
K+P+ YI + D KK+ + E+ + G W + EK PY EKY +K
Sbjct: 28 KKPTSAYIYFVSDYRLVLKKKGKATNKVNEVAKMCGTAWNAMKENEKAPYYEKYNIDKAR 87
Query: 233 YLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHP 292
YL +E EA+ DK K KDP KPK
Sbjct: 88 YL-------KEKEAL--------------------------DK-----KMGKDPNKPKRC 109
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKI---TGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
TAYF F + R + K +LE KI GE+W++MT+++K+ Y ++ +K+K++Y +
Sbjct: 110 QTAYFFFLHDFREQM--KGKALLEGEKIPALAGEKWRSMTDDEKKVYNDMVQKDKQRYEK 167
Query: 350 EMEAYKRR 357
ME +K +
Sbjct: 168 AMEEWKSK 175
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 290 KHPVTAYFLFSSERRAALL----ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
K P +AY F S+ R L A NK V EVAK+ G W M E +K PY E +K
Sbjct: 28 KKPTSAYIYFVSDYRLVLKKKGKATNK-VNEVAKMCGTAWNAMKENEKAPYYEKYNIDKA 86
Query: 346 KYNEEMEAYKRRM 358
+Y +E EA ++M
Sbjct: 87 RYLKEKEALDKKM 99
>gi|71019847|ref|XP_760154.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
gi|46099871|gb|EAK85104.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
Length = 286
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 207 LGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQY 266
+GA+W + A K YE +++ EKE Y + +A+ + L E+ K++ A
Sbjct: 145 VGAEWAQLPAHLKSRYEAQHEQEKEQYERALAEWK-----AALSPEDIKRQNAY------ 193
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWK 326
+ K K +DP KPK P +A+F F ++ RA+ A N+ E +K GE WK
Sbjct: 194 --IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRASE-AVIPNITEFSKRGGERWK 250
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
M+ EQK PYE+ A + E+Y ++E Y
Sbjct: 251 QMSAEQKAPYEQRALQALEQYKRDLELY 278
>gi|417397773|gb|JAA45920.1| Putative transcription factor a mitochondrial [Desmodus rotundus]
Length = 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP A E+ + W+ + EKK YE+ Y+A+ +AY
Sbjct: 51 KKPMTSYVRFSKEQLPIFKAQNPGARNSELIKKIAELWRELPDSEKKVYEDAYKADWQAY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
Q E M+ +EEE + L ++ +Q + K++ K+E L KPK P
Sbjct: 111 KQ---------ELMR-IEEELTPSQRVSLEKEMMQ--KRLKKKSIIKKRELTLLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY +F SER D + L + K E WKN+T QK+ Y ++A+ +K +Y E++
Sbjct: 159 RSAYNIFISERFQE-AKDGTSQLRL-KAVNESWKNLTSSQKQVYIQLAEDDKVRYFNEIK 216
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 217 SWEAQMVEV 225
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C+D E K++ P+ F E + +WK+++A +K +E+ +A+K Y + M
Sbjct: 19 FVQTCRD---EHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKADKVRYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K +K+KDP PK P +A+F
Sbjct: 76 --------------------------KTYVPPKGVG----KTGRKKKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + +++ N + E+AK GE W + + + P+E+ A K +EKY +E+ AY+
Sbjct: 106 VFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEVAAYR 165
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 164 DRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE 223
RKKK KRP + ++C + K E+P EI LG W S++++ P+E
Sbjct: 88 GRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFE 147
Query: 224 EKYQAEKEAYLQVMAKERRESEAMK 248
+K +E Y + +A R A K
Sbjct: 148 QKAGKLREKYEKEVAAYRAGGGASK 172
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++L C+ N+ K++ P A FKE + KWK +S EK YE + +K Y + M
Sbjct: 18 FLLNCR---NKHKEQQPNAYINFKEFSKRCSEKWKTISKHEKSKYEAIARLDKARYQKEM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ + M+ ++ ++KDP PK P +++F
Sbjct: 75 --------------KNYVPPVGMKKRKR----------------RKKDPKAPKRPPSSFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LFS E + +DN + V++VAK+ GE W +E+ K+PYEE A + + KY++E+ Y+
Sbjct: 105 LFSREHYTKIKSDNPHWSVVQVAKLLGEMWSKKSEQDKQPYEEKAARLRAKYHQELMTYR 164
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK 225
KRP + L+ ++ + + K +NP ++ +LG W S ++K+PYEEK
Sbjct: 97 KRPPSSFFLFSREHYTKIKSDNPHWSVVQVAKLLGEMWSKKSEQDKQPYEEK 148
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 38/174 (21%)
Query: 190 EAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK+NP+ F + + +WK +S +EK +E+ + +K Y + M
Sbjct: 26 EHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFEDLAKVDKVRYDREM---------- 75
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+ Y+ K KK+KDP PK P + +FLF S+ R +
Sbjct: 76 ----------------KTYIPPKGS--------KKKKDPNAPKRPPSGFFLFCSDHRPKI 111
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
A + + +VAK GE W T+E+K+PY A K KEKY +++ Y+ + K
Sbjct: 112 KAGSPGLTIGDVAKKLGELWNGCTDEEKKPYNAKAAKLKEKYEKDVADYRTKGK 165
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C D + K +P ++ LG W + EEKKPY K KE Y
Sbjct: 94 KRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKPYNAKAAKLKEKY 153
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 154 EKDVADYR 161
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNK----NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP KP+ +++Y F R N N + +K E WK M+ ++K +E++
Sbjct: 4 RDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM+ Y
Sbjct: 64 AKVDKVRYDREMKTY 78
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C+D E K+++P+ F E + +WK+++A +K +E+ +A+K Y + M
Sbjct: 19 FVQTCRD---EHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKADKVRYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K +K+KDP PK P +A+F
Sbjct: 76 --------------------------KTYVPPKGVG----KTGRKKKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + +++ N + E+AK GE W + + + P+E+ A K +EKY +E+ AY+
Sbjct: 106 VFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEVAAYR 165
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 164 DRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE 223
RKKK KRP + ++C + K E+P EI LG W S++++ P+E
Sbjct: 88 GRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFE 147
Query: 224 EKYQAEKEAYLQVMAKERRESEAMK 248
+K +E Y + +A R A K
Sbjct: 148 QKAGKLREKYEKEVAAYRAGGGASK 172
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|118484838|gb|ABK94286.1| unknown [Populus trichocarpa]
Length = 144
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F + R +NK+V V K G++WK+++E +K P+
Sbjct: 31 KAAKDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPFA 90
Query: 338 EIAKKNKEKYNEEMEAYKRRM 358
A+K K +YN++M AY +R+
Sbjct: 91 AKAEKRKFEYNKDMAAYNKRL 111
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK P + +FLF SE R + + N + +VAK GE W N+++ +K+PY
Sbjct: 2 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNN 61
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
A K KEKY +++ YK + K
Sbjct: 62 KAAKLKEKYEKDVADYKSKGK 82
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 11 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 70
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM-- 237
++ C+++ ++ K N F + + +WK +S +EK +E+ +A+K Y M
Sbjct: 19 FVQTCREE-HKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFEDLARADKTRYDTEMKD 77
Query: 238 ---AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
A+ R A + K+KDP PK P +
Sbjct: 78 YAPARGGRGGPAQR---------------------------------KKKDPNAPKRPPS 104
Query: 295 AYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
A+F+F ++ R + ADN ++ +AK GE W T E K PYE A KEKY +++
Sbjct: 105 AFFIFCADFRPQIKADNPGMVIGTIAKRLGEMWGRQTNENKAPYEHKANILKEKYKKDVA 164
Query: 353 AYKR 356
AY+R
Sbjct: 165 AYQR 168
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KRP + ++C D + K +NP I LG W + E K PYE
Sbjct: 91 RKKKDPNAPKRPPSAFFIFCADFRPQIKADNPGMVIGTIAKRLGEMWGRQTNENKAPYEH 150
Query: 225 KYQAEKEAYLQVMAKERRESEA 246
K KE Y + +A +R +
Sbjct: 151 KANILKEKYKKDVAAYQRSGAS 172
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P+T++ FS+ R ++ ++N + EV K+ GE+WK ++ + K+ Y+E A K
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGIAFGEVGKVIGEKWKGLSADDKKEYDEKAAK 116
Query: 343 NKEKYNEEMEAY 354
+KE+Y +EME+Y
Sbjct: 117 DKERYQKEMESY 128
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P ++ + K ENP F E+ ++G KWK +SA++KK Y+EK +KE Y
Sbjct: 62 KKPLTSFMYFSNAIRESVKSENPGIAFGEVGKVIGEKWKGLSADDKKEYDEKAAKDKERY 121
Query: 234 LQVM 237
+ M
Sbjct: 122 QKEM 125
>gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALL---ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R ADNK V V K G +WK+MTE +K PY A
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKA 99
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+K K +Y + M++Y ++ E
Sbjct: 100 EKRKAEYEKSMKSYNKKQAE 119
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ + +
Sbjct: 7 FVQTCRE---EHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFED---------MAKL 54
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K E K K+ KDP PK P +A+F
Sbjct: 55 DKARYERE-----------------MKNYIPPKGE------KKKRFKDPNAPKRPPSAFF 91
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F +E R + + + +VAK GE W + E+K+PYE+ A + KEKY +++ AY+
Sbjct: 92 IFCAEFRPKVKEETPGLSIGDVAKKLGEMWNKTSSEEKQPYEKKAARLKEKYEKDITAYR 151
Query: 356 RRMK 359
+ K
Sbjct: 152 SKGK 155
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C + + K+E P ++ LG W S+EEK+PYE+K KE Y
Sbjct: 84 KRPPSAFFIFCAEFRPKVKEETPGLSIGDVAKKLGEMWNKTSSEEKQPYEKKAARLKEKY 143
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK+ +E+ +A+K Y
Sbjct: 4 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKADKARY---- 59
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 60 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 91
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ + +VAK GE W N E K+PY + A K KEK+ + + AY+
Sbjct: 92 LFCSEYCPKIKGEHPGLSIGDVAKKLGELWNNTAAEDKQPYGKKAAKLKEKHEKGIAAYR 151
Query: 356 RRMK 359
+ K
Sbjct: 152 AKGK 155
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +AE+K+PY +K KE +
Sbjct: 84 KRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKKLGELWNNTAAEDKQPYGKKAAKLKEKH 143
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 144 EKGIAAYR 151
>gi|297819892|ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
gi|297323667|gb|EFH54088.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
Length = 185
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYE 337
K +KDP KPK +A+F+F + R +N NV V K G++WK+M++ +K PYE
Sbjct: 45 KAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYE 104
Query: 338 EIAKKNKEKYNEEMEAYKRRMKE 360
E A K K +Y ++M+AY + M+E
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNMEE 127
>gi|403353616|gb|EJY76349.1| hypothetical protein OXYTRI_02144 [Oxytricha trifallax]
Length = 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 30/180 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PY+++ K++ + + FKEI ++LG +WK +S +EK PY +K + +
Sbjct: 95 PYVIFVKEERPKMMMDKNTVNFKEIMSLLGQRWKEMSEDEKLPYRQKSEED--------- 145
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFL 298
+ R E+ K LE++H + + E+ +N +PKK P TAY +
Sbjct: 146 RSRHSDESKKYLEKKHNEMHSKEVRRG----------KNGQPKK---------PRTAYQI 186
Query: 299 FSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
F+ R L + N +++K EW ++ +QKR Y E AK +KEKY + +E +K+
Sbjct: 187 FAHVIRKKLKIKKPHANDSDISKAVTIEWAKLSGDQKRFYHEEAKLDKEKYEKAIEEWKK 246
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 206 ILGAKWKNVSAEEKKPYEEKYQAEKEAYL--------QVMAKERRESEAMKLLEEEHKQK 257
++G +W ++ ++K YEEK + ++E YL Q M + R+ S K
Sbjct: 3 LIGKEWNALAPDQKHIYEEKAKIDRERYLSELQSCSGQNMNEMRQSSNIGNDRNYNGKNN 62
Query: 258 TAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNK--NVL 315
EQ + + + ++ K+ PK ++ Y +F E R ++ D N
Sbjct: 63 N-----EQGSGVGESGVVKKTRRRRLKEKGVPKKVLSPYVIFVKEERPKMMMDKNTVNFK 117
Query: 316 EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
E+ + G+ WK M+E++K PY + +++++ ++++E + Y
Sbjct: 118 EIMSLLGQRWKEMSEDEKLPYRQKSEEDRSRHSDESKKY 156
>gi|403366347|gb|EJY82975.1| hypothetical protein OXYTRI_19408 [Oxytricha trifallax]
Length = 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 30/180 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PY+++ K++ + + FKEI ++LG +WK +S +EK PY +K + +
Sbjct: 95 PYVIFVKEERPKMMMDKNTVNFKEIMSLLGQRWKEMSEDEKLPYRQKSEED--------- 145
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFL 298
+ R E+ K LE++H + + E+ +N +PKK P TAY +
Sbjct: 146 RSRHSDESKKYLEKKHNEMHSKEVRRG----------KNGQPKK---------PRTAYQI 186
Query: 299 FSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
F+ R L + N +++K EW ++ +QKR Y E AK +KEKY + +E +K+
Sbjct: 187 FAHVIRKKLKIKKPHANDSDISKAVTIEWAKLSGDQKRFYHEEAKLDKEKYEKAIEEWKK 246
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 206 ILGAKWKNVSAEEKKPYEEKYQAEKEAYL--------QVMAKERRESEAMKLLEEEHKQK 257
++G +W ++ ++K YEEK + ++E YL Q M + R+ S K
Sbjct: 3 LIGKEWNALAPDQKHIYEEKAKIDRERYLSELQSCSGQNMNEMRQASNIGNDRNYNGKNN 62
Query: 258 TAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNK--NVL 315
EQ + + + ++ K+ PK ++ Y +F E R ++ D N
Sbjct: 63 N-----EQGSGVGESGVVKKTRRRRLKEKGVPKKVLSPYVIFVKEERPKMMMDKNTVNFK 117
Query: 316 EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
E+ + G+ WK M+E++K PY + +++++ ++++E + Y
Sbjct: 118 EIMSLLGQRWKEMSEDEKLPYRQKSEEDRSRHSDESKKY 156
>gi|221120410|ref|XP_002166637.1| PREDICTED: high mobility group-T protein-like [Hydra
magnipapillata]
gi|388594888|gb|AFK74879.1| transcription factor HMG-B3b [Hydra vulgaris]
Length = 177
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK V+AYF F+S R L ADN V E+AK+ GE W+ +T+ K+PYE +A K++++
Sbjct: 108 PKRNVSAYFHFASAIRPKLKADNPTLGVTELAKMIGERWQKLTDSDKKPYENLAAKDRDR 167
Query: 347 YNEEMEAY 354
Y E+ Y
Sbjct: 168 YQRELSEY 175
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 280 PKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPY 336
PK KDP KPK T++ +F + RA L + + E AK G WK M++E+K+PY
Sbjct: 2 PKARKDPNKPKGAKTSFIIFGEKTRADRLEKGETIPTQTEFAKELGNLWKEMSKEEKKPY 61
Query: 337 EEIAKKNKEKYNEEMEAY 354
++A ++K+++ +EME Y
Sbjct: 62 LDLAAEDKKRFQKEMEGY 79
>gi|116781378|gb|ABK22074.1| unknown [Picea sitchensis]
gi|224284710|gb|ACN40086.1| unknown [Picea sitchensis]
Length = 154
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGE 323
L K++ +K KPK KDP +PK P TA+F++ E R D K V V K G+
Sbjct: 26 LSAKEKPNKRQAKPKAVKDPNQPKRPPTAFFVYLEEFRKTFKQKHPDVKGVTAVGKACGD 85
Query: 324 EWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
+WK M+E +K PY A + + +Y+ M AYK++
Sbjct: 86 KWKEMSEAEKAPYLAKAAQKRAEYDVTMTAYKKK 119
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPTKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|164661201|ref|XP_001731723.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
gi|159105624|gb|EDP44509.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
Length = 97
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAA-----LLADNKNVLEVAKITGEEWKNMTEE 331
++ K +KDP PK P++AY FS + R A L D+ V +V ++ G +WK M++E
Sbjct: 13 TRRTKAKKDPAAPKRPLSAYMFFSQDWRDASKPRTLTQDS--VCDVGRLLGTKWKEMSDE 70
Query: 332 QKRPYEEIAKKNKEKYNEEMEAY 354
+K+PY E+A K+KE+ E AY
Sbjct: 71 EKKPYVEMASKDKERAESEKAAY 93
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 153 PIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENP--EAEFKEITNILGAK 210
P + + + KK A KRP Y+ + +D W +A K + ++ +LG K
Sbjct: 5 PTPKVTTGTRRTKAKKDPAAPKRPLSAYMFFSQD-WRDASKPRTLTQDSVCDVGRLLGTK 63
Query: 211 WKNVSAEEKKPY-------EEKYQAEKEAY 233
WK +S EEKKPY +E+ ++EK AY
Sbjct: 64 WKEMSDEEKKPYVEMASKDKERAESEKAAY 93
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMSKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYISPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|343471397|emb|CCD16178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 266
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 40/176 (22%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
+IL+ + ++ K NPE + E+ LG W + S + K+ Y
Sbjct: 120 FILFAAEHRDKVKAANPEMKTTELFQELGRMWNDASEKVKEKY----------------- 162
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKE-NKKPKKEKDPLKPKHPVTAYFL 298
K L +E K + E+ E +K + KE ++ K +KD PK P+T++
Sbjct: 163 --------KNLADEDKARFDREVSE----YKMQGGKEYSRSAKVKKDEGAPKRPMTSFMH 210
Query: 299 FSSERRAALLADNKN----VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
FS E R NKN V++V++ G W +++E ++PY+++A+++KE+Y+ E
Sbjct: 211 FSKEFR------NKNKGGGVVDVSRAAGAAWNELSQEDRKPYQDMAQRDKERYHRE 260
>gi|386783903|gb|AFJ24846.1| high mobility group-1 [Schmidtea mediterranea]
Length = 192
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 37/181 (20%)
Query: 179 PYILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQV 236
PY + + E KK++P+ + F E + KWK +S +EK+ + + +KE YL+
Sbjct: 12 PYACFVQVVREEHKKKHPDEQIVFSEFSKRCSEKWKEMSPKEKQRFMDIAAKDKERYLKE 71
Query: 237 MAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAY 296
M ++ A +NK+ K KDP KPK TA+
Sbjct: 72 MD-----------------------------NYQPPAGTKNKR--KIKDPNKPKGAWTAF 100
Query: 297 FLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
F FS E R + +N V +VAK+ G+ W+ ++ K YEE AK++KE+YN+E+E Y
Sbjct: 101 FFFSDEHRKKIKEENPEYKVGDVAKVLGKMWEACKDKSK--YEEQAKRDKERYNKELEEY 158
Query: 355 K 355
K
Sbjct: 159 K 159
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK++SA+EK +E+ + +K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFEDLAKGDKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K++KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGET-----KGKRKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + ++ + + AK GE W T + K P+E+ A K KEKY +++ AY+
Sbjct: 105 IFCSEHRPQIKSETPGLSIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E WK+M+ ++K +E++A
Sbjct: 5 DPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFEDLA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y EM+ Y
Sbjct: 65 KGDKARYEREMKTY 78
>gi|336465411|gb|EGO53651.1| hypothetical protein NEUTE1DRAFT_106544 [Neurospora tetrasperma
FGSC 2508]
gi|350295304|gb|EGZ76281.1| hypothetical protein NEUTE2DRAFT_122932 [Neurospora tetrasperma
FGSC 2509]
Length = 592
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L N + E+AK+ GE W+N+T +K
Sbjct: 112 KYRRHPKADEN--APERPPSAYVLFSNKMREDLKGRNLSFTEIAKLVGENWQNLTPAEKE 169
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE A+ KEKY+ E+ YK+
Sbjct: 170 PYESKAQAYKEKYHAELAEYKK 191
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ + K N F EI ++G W+N++ EK+PYE K QA KE Y
Sbjct: 126 RPPSAYVLFSNKMREDLKGRN--LSFTEIAKLVGENWQNLTPAEKEPYESKAQAYKEKYH 183
Query: 235 QVMAKERRESEAMKLLE 251
+A+ ++ + K ++
Sbjct: 184 AELAEYKKTPQYQKYMQ 200
>gi|390469080|ref|XP_002753935.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like isoform
2 [Callithrix jacchus]
Length = 411
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY----- 233
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 234 -----LQVMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
L +A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSLAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +S +EK +EE +A+K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARFEEMAKADKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K + +K KDP PK P +A+F
Sbjct: 76 --------------------------KNYVPPKGK--------RKTKDPNAPKRPPSAFF 101
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + AD+ + E+AK GE W +T E K PYE+ A K KEKY +++ AY+
Sbjct: 102 VFCSEHRPKVKADHPGLGIGEIAKRLGEMWGLLTPETKSPYEKKAAKLKEKYEKDVAAYR 161
Query: 356 RRMK 359
+ K
Sbjct: 162 GKGK 165
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K+E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKEETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ V +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSVGDVAKKLGEMWNNAAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSVGDVAKKLGEMWNNAAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E++ +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY ++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTASDDKQPYEKKAAKLKEKYEKDTAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + + KK++P+A F E + +WK +SAEEK +E+ +A+K
Sbjct: 16 YAFFVQTCGEDHKKKHPDASVNFSEFSKKGSERWKTISAEEKGKFEDMAKADK------- 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
A+ RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 69 ARYERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDITAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WKN+S +EK ++E +A+K Y
Sbjct: 13 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMAKADKLRY---- 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 69 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 98
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 99 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEKYEKDVADYK 158
Query: 356 RRMK 359
+ K
Sbjct: 159 SKGK 162
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 91 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEKY 150
Query: 234 LQVMA 238
+ +A
Sbjct: 151 EKDVA 155
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +S +EK +E+ L
Sbjct: 19 YAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFED---------LAKQ 69
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + +K K KDP PK P +A+F
Sbjct: 70 DKVRYDREMMDYVPAKGGKKKK----------------------KFKDPNAPKRPPSAFF 107
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + ++ + EVAK GE W N E K+PYE+ A K KEKY +++ AY+
Sbjct: 108 IFCSEFRPKVKGEHPGLTIGEVAKKLGELWNNTNSEDKQPYEKKASKLKEKYEKDVAAYR 167
Query: 356 RRMK 359
++ K
Sbjct: 168 QKTK 171
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C + + K E+P E+ LG W N ++E+K+PYE+K KE Y
Sbjct: 100 KRPPSAFFIFCSEFRPKVKGEHPGLTIGEVAKKLGELWNNTNSEDKQPYEKKASKLKEKY 159
Query: 234 LQVMAKERRESEA 246
+ +A R++++
Sbjct: 160 EKDVAAYRQKTKG 172
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 38/170 (22%)
Query: 190 EAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK+NP+ F + + +WK +S +EK +E+ + +K Y + M
Sbjct: 33 EHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFEDLAKVDKVRYDREM---------- 82
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+ Y+ K KK+KDP PK P + +FLF S+ R +
Sbjct: 83 ----------------KTYIPPKGS--------KKKKDPNAPKRPPSGFFLFCSDHRPKI 118
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
A + + +VAK GE W T+E+K+PY A K KEKY +++ Y+
Sbjct: 119 KAGSPGLTIGDVAKKLGELWNGCTDEEKKPYNAKAAKLKEKYEKDVADYR 168
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C D + K +P ++ LG W + EEKKPY K KE Y
Sbjct: 101 KRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKPYNAKAAKLKEKY 160
Query: 234 LQVMAKERRESEA 246
+ +A R E +
Sbjct: 161 EKDVADYRTEGKV 173
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNK----NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP KP+ +++Y F R N N + +K E WK M+ ++K +E++
Sbjct: 11 RDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFEDL 70
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM+ Y
Sbjct: 71 AKVDKVRYDREMKTY 85
>gi|390348780|ref|XP_003727081.1| PREDICTED: high mobility group B protein 13-like
[Strongylocentrotus purpuratus]
Length = 238
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNMTEEQK 333
+++K E P KPK P+T++F F+SE+R L A N +V +V K G W++++E++K
Sbjct: 41 QDRKEFSEDIPAKPKRPLTSFFQFTSEQRPKLTAMEPNLSVTDVTKRIGAMWRDLSEDEK 100
Query: 334 RPYEEIAKKNKEKYNEEMEAYKRRMKE 360
Y + +EKY EEME Y+ R+ +
Sbjct: 101 EVYRLDFESRREKYTEEMEDYRSRLTD 127
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 163 QDRKKKG---CAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEK 219
QDRK+ A+ KRP + + +Q + P ++T +GA W+++S +EK
Sbjct: 41 QDRKEFSEDIPAKPKRPLTSFFQFTSEQRPKLTAMEPNLSVTDVTKRIGAMWRDLSEDEK 100
Query: 220 KPYEEKYQAEKEAYLQVM--AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN 277
+ Y +++ +E Y + M + R E + + E + K M+ ++ K E K N
Sbjct: 101 EVYRLDFESRREKYTEEMEDYRSRLTDEQLDSMSEIDRNKREMKAKRRH---KSEMKKLN 157
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEV---AKITGEEWKNMTEEQKR 334
KPK P T Y LF + A + E+ K W ++ + +K+
Sbjct: 158 ----------KPKRPPTGYSLFIKAQFNQQPAGGRTREEIQAQFKEAASIWHSLPDHEKQ 207
Query: 335 PYEEIAKKNKEKYNEEMEAYKRRM 358
Y E A E Y EEME +KR+M
Sbjct: 208 QYHEEASLLTETYREEMEEWKRKM 231
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKN 327
K + K KK +++KDP PK ++AY F++E+R + +N V +V KI GE WK
Sbjct: 6 KSRSGKAEKKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKILGERWKA 65
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAY 354
++++Q+ PYE A +K++Y +E +AY
Sbjct: 66 LSDKQRAPYEAKAAADKKRYEDEKQAY 92
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q + ++ENP F ++ ILG +WK +S +++ PYE K A+K+ Y
Sbjct: 26 KRGLSAYMFFANEQRDNVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRY 85
>gi|355568638|gb|EHH24919.1| BRG1-associated factor 57 [Macaca mulatta]
Length = 393
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 239 KERRE----------SEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
R S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYRNSPMYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P F E + +W+ +SA+EK +E+ + +K Y
Sbjct: 19 FVATCRE---EHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDMAKGDKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ MK K A K++KDP PK P +A+F
Sbjct: 72 ------DKDMKGYVPPKGSKAAG--------------------KRKKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F +E R + ADN + ++AK G W T + K+P+E A K KEKY +++ AYK
Sbjct: 106 VFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEKDVAAYK 165
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P F E + +W+ +SA+EK +E+ + +K Y
Sbjct: 19 FVATCRE---EHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDMAKGDKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ MK K A K++KDP PK P +A+F
Sbjct: 72 ------DKDMKGYVPPKGSKAAG--------------------KRKKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F +E R + ADN + ++AK G W T + K+P+E A K KEKY +++ AYK
Sbjct: 106 VFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEKDVAAYK 165
>gi|56756695|gb|AAW26520.1| SJCHGC07008 protein [Schistosoma japonicum]
Length = 213
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERR---AALLADNKNVLEVAKITGEEWKNMTEE 331
++ KK KK KDP P P++AYFL+ +E R A L+ +V EVAK GE W+NM E
Sbjct: 115 RQTKKQKKPKDPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRNMDSE 174
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKRRM 358
K Y+ + K+KY E++ Y+ +
Sbjct: 175 TKSTYQSRVDELKKKYQEDLRVYQSNL 201
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F++E+R + DN + +V K+ GE WK ++E+Q++PYE
Sbjct: 15 QKKKDPNAPKRGLSAYMFFANEQRENVRNDNPGIAFGQVGKVLGERWKALSEKQRQPYEA 74
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E AY
Sbjct: 75 KAAADKKRYEDEKAAY 90
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
Y+ + +Q + +NP F ++ +LG +WK +S ++++PYE K A+K+ Y
Sbjct: 30 YMFFANEQRENVRNDNPGIAFGQVGKVLGERWKALSEKQRQPYEAKAAADKKRY 83
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +E+ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKEIAAYR 163
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKERRES 244
+ +A R E
Sbjct: 156 EKEIAAYRAEG 166
>gi|440800724|gb|ELR21759.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 128
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P T Y FS+E R + DN ++ ++ K +WK+M+EE+K PY +AKK
Sbjct: 28 DPNAPKRPKTGYIFFSAEERVKVKEDNPDLGFGDITKQVSAKWKDMSEEEKEPYLTLAKK 87
Query: 343 NKEKYNEEMEAYK 355
+KE+Y +EM YK
Sbjct: 88 DKERYEKEMSKYK 100
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP YI + ++ + K++NP+ F +IT + AKWK++S EEK+PY + +KE Y
Sbjct: 33 KRPKTGYIFFSAEERVKVKEDNPDLGFGDITKQVSAKWKDMSEEEKEPYLTLAKKDKERY 92
Query: 234 LQVMAK 239
+ M+K
Sbjct: 93 EKEMSK 98
>gi|339046261|ref|NP_009647.2| Nhp6bp [Saccharomyces cerevisiae S288c]
gi|341942236|sp|P11633.3|NHP6B_YEAST RecName: Full=Non-histone chromosomal protein 6B
gi|4036|emb|CAA33378.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45271022|gb|AAS56892.1| YBR089C-A [Saccharomyces cerevisiae]
gi|151946484|gb|EDN64706.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190408749|gb|EDV12014.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256274037|gb|EEU08951.1| Nhp6bp [Saccharomyces cerevisiae JAY291]
gi|290878106|emb|CBK39165.1| Nhp6bp [Saccharomyces cerevisiae EC1118]
gi|333454471|tpg|DAA07210.2| TPA: Nhp6bp [Saccharomyces cerevisiae S288c]
Length = 99
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Query: 273 ADKENKKPK--------KEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITG 322
A KE K+PK ++KDP PK ++AY F++E R + ++N +V +V +I G
Sbjct: 3 ATKEAKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILG 62
Query: 323 EEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
E WK +T E+K+PYE A+ +K++Y E E Y
Sbjct: 63 ERWKALTAEEKQPYESKAQADKKRYESEKELY 94
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG +WK ++AEEK+
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEKQ 74
Query: 221 PYEEKYQAEKEAY 233
PYE K QA+K+ Y
Sbjct: 75 PYESKAQADKKRY 87
>gi|349576469|dbj|GAA21640.1| K7_Nhp6bp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 99
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 273 ADKENKKPK--------KEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITG 322
A KE K+PK ++KDP PK ++AY F++E R + ++N +V +V +I G
Sbjct: 3 ATKEAKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILG 62
Query: 323 EEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
E+WK +T E+K+PYE A+ +K++Y E E Y
Sbjct: 63 EKWKALTAEEKQPYESKAQADKKRYESEKELY 94
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG KWK ++AEEK+
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGEKWKALTAEEKQ 74
Query: 221 PYEEKYQAEKEAY 233
PYE K QA+K+ Y
Sbjct: 75 PYESKAQADKKRY 87
>gi|73953051|ref|XP_546107.2| PREDICTED: transcription factor A, mitochondrial [Canis lupus
familiaris]
Length = 246
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ +AY
Sbjct: 51 KKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPESEKKIYEDAYRADWQAY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
E + ++E+ M L ++ LQ + K+ K+E L KPK P
Sbjct: 111 ----------KEEINRIQEQLTPSQIMSLEKEILQ--KRLKKKALIKKRELTMLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+AY +F +ER + K+ K+ E WKN++ QK+ Y ++A +K +Y E
Sbjct: 159 RSAYNIFIAER----FQETKDGTSQVKLKTINENWKNLSSSQKQVYIQLANDDKIRYYNE 214
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 215 MKSWEEQMMEV 225
>gi|391344132|ref|XP_003746357.1| PREDICTED: high mobility group protein DSP1-like isoform 1
[Metaseiulus occidentalis]
gi|391344134|ref|XP_003746358.1| PREDICTED: high mobility group protein DSP1-like isoform 2
[Metaseiulus occidentalis]
Length = 187
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNMTEEQKR 334
K +K+KDP PK ++A+F F + R + A V EVAK G +W++ T+EQK
Sbjct: 84 GKAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGESTVAEVAKELGRKWQDCTDEQKG 143
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
YE++A K+K++Y EM AYK+
Sbjct: 144 KYEQLAAKDKQRYEREMTAYKK 165
>gi|85110964|ref|XP_963712.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
gi|28925429|gb|EAA34476.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
Length = 597
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L N + E+AK+ GE W+N+T +K
Sbjct: 112 KYRRHPKADEN--APERPPSAYVLFSNKMREDLKGRNLSFTEIAKLVGENWQNLTPAEKE 169
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE A+ KEKY+ E+ YK+
Sbjct: 170 PYESKAQAYKEKYHAELAEYKK 191
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ + K N F EI ++G W+N++ EK+PYE K QA KE Y
Sbjct: 126 RPPSAYVLFSNKMREDLKGRN--LSFTEIAKLVGENWQNLTPAEKEPYESKAQAYKEKYH 183
Query: 235 QVMAKERRESEAMKLLE 251
+A+ ++ + K ++
Sbjct: 184 AELAEYKKTPQYQKYMQ 200
>gi|221053558|ref|XP_002258153.1| high mobility group protein (HMG protein) [Plasmodium knowlesi
strain H]
gi|193807986|emb|CAQ38690.1| high mobility group protein (HMG protein),putative [Plasmodium
knowlesi strain H]
Length = 99
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTE 330
K+NK+ K+KDPL PK ++AY + ++R L+ + +NV +V K+ GE W ++
Sbjct: 12 KQNKR--KKKDPLAPKRALSAYMFYVKDKRLELIKEKPELARNVAQVGKLVGEAWGKLSA 69
Query: 331 EQKRPYEEIAKKNKEKYNEEMEAYKR 356
QK PYE+ A+ +K +Y++E+E Y++
Sbjct: 70 AQKTPYEKKAQLDKVRYSKEIEEYRK 95
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEE 218
K+ RKKK KR Y+ + KD+ E KE PE ++ ++G W +SA +
Sbjct: 12 KQNKRKKKDPLAPKRALSAYMFYVKDKRLELIKEKPELARNVAQVGKLVGEAWGKLSAAQ 71
Query: 219 KKPYEEKYQAEKEAY 233
K PYE+K Q +K Y
Sbjct: 72 KTPYEKKAQLDKVRY 86
>gi|391344136|ref|XP_003746359.1| PREDICTED: high mobility group protein DSP1-like isoform 3
[Metaseiulus occidentalis]
Length = 202
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNMTEEQKR 334
K +K+KDP PK ++A+F F + R + A V EVAK G +W++ T+EQK
Sbjct: 99 GKAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGESTVAEVAKELGRKWQDCTDEQKG 158
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
YE++A K+K++Y EM AYK+
Sbjct: 159 KYEQLAAKDKQRYEREMTAYKK 180
>gi|336274626|ref|XP_003352067.1| hypothetical protein SMAC_00615 [Sordaria macrospora k-hell]
gi|380096352|emb|CCC06400.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 595
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L N + E+AK+ GE W+N+T +K
Sbjct: 108 KYRRHPKADEN--APERPPSAYVLFSNKMREDLKGRNLSFTEIAKLVGENWQNLTPAEKE 165
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE A+ KEKY+ E+ YK+
Sbjct: 166 PYESKAQAYKEKYHAELAEYKK 187
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ + K N F EI ++G W+N++ EK+PYE K QA KE Y
Sbjct: 122 RPPSAYVLFSNKMREDLKGRN--LSFTEIAKLVGENWQNLTPAEKEPYESKAQAYKEKYH 179
Query: 235 QVMAKERRESEAMKLLE 251
+A+ ++ ++ K ++
Sbjct: 180 AELAEYKKTAQYQKYMQ 196
>gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 277 NKKPKKE-----KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNM 328
NKKP K KDP KPK P +A+F+F E R +NK+V V K G++WK++
Sbjct: 18 NKKPTKGGKGAAKDPNKPKRPASAFFVFMEEFRETYKKEHPNNKSVAAVGKAGGQKWKSL 77
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
++ +K PY+ A K K +Y + M AY ++ +E
Sbjct: 78 SDSEKAPYQAKADKRKVEYEKNMNAYNKKQEE 109
>gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba var. minor]
Length = 74
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F ++ R D NK+V V K GEEWK+++EE+K PY + A
Sbjct: 1 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 60
Query: 341 KKNKEKYNEEMEAY 354
K KE+Y ++AY
Sbjct: 61 LKKKEEYEITLQAY 74
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 69 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 128
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
K K +YN+ M AY +++ +
Sbjct: 129 AKRKAEYNKTMVAYNKKLAD 148
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R +NK+V V K G++WK +++E+K PY+ A
Sbjct: 31 KDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKA 90
Query: 341 KKNKEKYNEEMEAYKRRM 358
+K K +Y + M+AY +++
Sbjct: 91 EKRKAEYQKNMDAYNKKL 108
>gi|320589146|gb|EFX01608.1| chromatin-associated protein [Grosmannia clavigera kw1407]
Length = 593
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
P+ P +AY LFS++ R L N + E+AK+ GE W+ +T +++PYE A+ K+KYN
Sbjct: 122 PERPPSAYVLFSNKMREKLKGQNLSFTEIAKLVGENWQTLTPAERKPYETEAQAAKDKYN 181
Query: 349 EEMEAYKR 356
M YK+
Sbjct: 182 HAMVVYKK 189
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 151 TLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAK 210
T+P V + + K CA + PS Y+L+ + K +N F EI ++G
Sbjct: 101 TVPGVLAKRKYRRHPKPDECAPERPPSA-YVLFSNKMREKLKGQN--LSFTEIAKLVGEN 157
Query: 211 WKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLL 250
W+ ++ E+KPYE + QA K+ Y M ++ E + +
Sbjct: 158 WQTLTPAERKPYETEAQAAKDKYNHAMVVYKKTPEYQRYI 197
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P TAY L+ +E RA + D K V EVAK GE WK M EE K+PY++ A
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDMK-VTEVAKKAGENWKAMGEEDKKPYQDKAD 154
Query: 342 KNKEKYNEEMEAY 354
K KE + EM+ Y
Sbjct: 155 KAKETWKTEMKKY 167
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 341 KKNKEKYNEEMEAYKRRM 358
K K +YN+ M AY +++
Sbjct: 101 AKRKAEYNKTMVAYNKKL 118
>gi|295913475|gb|ADG57987.1| transcription factor [Lycoris longituba]
Length = 162
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 341 KKNKEKYNEEMEAYKRRM 358
K K +YN+ M AY +++
Sbjct: 101 AKRKAEYNKTMVAYNKKL 118
>gi|345569047|gb|EGX51916.1| hypothetical protein AOL_s00043g650 [Arthrobotrys oligospora ATCC
24927]
Length = 105
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E+R + A+N + +V K+ GE WK +T Q++PYE+ AK
Sbjct: 21 DPNAPKRGLSAYMFFANEQRENVRAENPGIAFGQVGKVLGERWKALTTAQRKPYEDKAKA 80
Query: 343 NKEKYNEEMEAYK 355
+K++Y +E AY+
Sbjct: 81 DKQRYEDEKIAYQ 93
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q + ENP F ++ +LG +WK ++ ++KPYE+K +A+K+ Y
Sbjct: 26 KRGLSAYMFFANEQRENVRAENPGIAFGQVGKVLGERWKALTTAQRKPYEDKAKADKQRY 85
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPEA F E + +WK +S +EK +E+ + +K Y + M
Sbjct: 19 FVQTCRE---EHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E + +K+KDP PK P +A+F
Sbjct: 76 --------------------------KTYVPPKGE-----RGSRKKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
++ +E R+ + A+N + +AK GE W N ++K YE K KEKY+++M +Y+
Sbjct: 105 IYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDMASYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 SKGK 168
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%)
Query: 159 KDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEE 218
K + RKKK KRP + ++C + ++ + ENP I LG W N A+E
Sbjct: 82 KGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADE 141
Query: 219 KKPYEEKYQAEKEAYLQVMAKER 241
K YE K KE Y + MA R
Sbjct: 142 KSIYERKTAKLKEKYDKDMASYR 164
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPEA F E + +WK +S +EK +E+ + +K Y + M
Sbjct: 19 FVQTCRE---EHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E + +K+KDP PK P +A+F
Sbjct: 76 --------------------------KTYVPPKGE-----RGSRKKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
++ +E R+ + A+N + +AK GE W N ++K YE K KEKY+++M +Y+
Sbjct: 105 IYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDMASYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 SKGK 168
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%)
Query: 159 KDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEE 218
K + RKKK KRP + ++C + ++ + ENP I LG W N A+E
Sbjct: 82 KGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADE 141
Query: 219 KKPYEEKYQAEKEAYLQVMAKER 241
K YE K KE Y + MA R
Sbjct: 142 KSIYERKTAKLKEKYDKDMASYR 164
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|307192728|gb|EFN75836.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 445
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 30/175 (17%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++PE + F+E + +WK +S +EKK + E AEK+ K+R ++E
Sbjct: 271 EHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHE--MAEKD-------KKRYDAE-- 319
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA- 306
++ Y K E KK K KD PK ++A+F F ++ R
Sbjct: 320 ---------------MQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKV 364
Query: 307 -LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+L V ++AK G++W + E K YE +A+K+K +Y EM AYK++M++
Sbjct: 365 KMLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMQD 419
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIPAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + W E KK++ +A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCWEEPKKKHADASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KSKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + + AK GE W N ++K+PYE+ A K KEKY +++ AY
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDAAKKLGEMWNNTAADEKQPYEKKAAKLKEKYEKDIAAYG 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W N +A+EK+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDAAKKLGEMWNNTAADEKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ +A + K + K+ + +E+ + +PKK PL+ HPV
Sbjct: 156 EKDIA-----AYGAKGKPDAAKKGEMLCYIEKKF--------DRNEPKKPAVPLRTDHPV 202
Query: 294 TA 295
Sbjct: 203 MG 204
>gi|45383910|ref|NP_989431.1| transcription factor A, mitochondrial [Gallus gallus]
gi|23821364|dbj|BAC20950.1| mitochondrial transcription factor A [Gallus gallus]
gi|53130616|emb|CAG31637.1| hypothetical protein RCJMB04_9a18 [Gallus gallus]
Length = 262
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 32/206 (15%)
Query: 169 GC------AER-KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP 221
GC AER KRP Y + +D +++NPE E+ L W+ + A +K+
Sbjct: 34 GCCRAMSSAERPKRPLSAYFRFLRDNQPAFRQQNPELNSLELVKKLAGVWRELPASQKQV 93
Query: 222 YEEKYQAEKEAYLQVMAKERRE---SEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENK 278
YEE + + Y + +A + + ++A L EE K+ A + +
Sbjct: 94 YEEARKTDWRKYEEQLAAYKAQLTPAQAAALKEERRKRL---------------AKRRSF 138
Query: 279 KPKKEKDPL-KPKHPVTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRP 335
+ K+E L KPK P + + +F SE +K + AK+ E W+N++ QK+P
Sbjct: 139 RIKRELTVLGKPKRPRSGFNIFVSEN----FQQSKGLSPTAKLKQLFETWQNLSSSQKQP 194
Query: 336 YEEIAKKNKEKYNEEMEAYKRRMKEL 361
Y ++A+ +K +Y EM++++ +M EL
Sbjct: 195 YLQLAQDDKVRYQNEMKSWEAKMVEL 220
>gi|406866133|gb|EKD19173.1| HMG box protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 525
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK + + P+ P +AY +FS++ R L N + E+AK+ GE W+N++ +K
Sbjct: 107 KYRRHPKPDDN--APERPPSAYVIFSNKMREDLKGRNLSFTEIAKLVGENWQNLSPSEKD 164
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE+ A KE+YN E+ YK+
Sbjct: 165 PYEQQASAAKERYNNELAEYKK 186
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
RP Y+++ + K N F EI ++G W+N+S EK PYE++ A KE Y
Sbjct: 121 RPPSAYVIFSNKMREDLKGRN--LSFTEIAKLVGENWQNLSPSEKDPYEQQASAAKERY 177
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 30/184 (16%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT + Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-WPGAKTYIPPKGETKK------KFKDPNAPKRPPSAFF 109
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 110 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 169
Query: 356 RRMK 359
+ K
Sbjct: 170 AKGK 173
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 102 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 161
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 162 EKDIAAYR 169
>gi|365762037|gb|EHN03653.1| Nhp6bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841847|gb|EJT44170.1| NHP6B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 102
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 275 KENKKPKK-----EKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKN 327
K+ K+PKK +KDP PK ++AY F++E R + ++N +V +V +I GE+WK
Sbjct: 11 KQTKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGEKWKA 70
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+T E K+PYE A+ +K++Y E E Y
Sbjct: 71 LTAEDKQPYESKAQADKKRYESEKELY 97
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG KWK ++AE+K+
Sbjct: 18 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGEKWKALTAEDKQ 77
Query: 221 PYEEKYQAEKEAY 233
PYE K QA+K+ Y
Sbjct: 78 PYESKAQADKKRY 90
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|295913458|gb|ADG57979.1| transcription factor [Lycoris longituba]
Length = 179
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 59 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 118
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
K K +YN+ M AY +++ +
Sbjct: 119 AKRKAEYNKTMVAYNKKLAD 138
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|301787699|ref|XP_002929265.1| PREDICTED: transcription factor A, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281343623|gb|EFB19207.1| hypothetical protein PANDA_019385 [Ailuropoda melanoleuca]
Length = 246
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ +AY
Sbjct: 51 KKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPDSEKKIYEDAYRADWQAY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
E + ++E+ + L ++ LQ + ++ K+E L KPK P
Sbjct: 111 ----------KEEINRIQEQLTPSQIVSLEKEILQ--KRLKRKALIKKRELTMLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY +F +ER D + +++ K E WKN++ QK+ Y ++A +K +Y EM+
Sbjct: 159 RSAYNIFIAERFQE-AKDGTSQVKL-KTINENWKNLSSSQKQVYIQLANDDKIRYYNEMK 216
Query: 353 AYKRRMKEL 361
+++ +MKE+
Sbjct: 217 SWEEQMKEV 225
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 30/170 (17%)
Query: 189 NEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMK 248
+E K N + F E + ++WK ++ +EKK ++ +A+K Y Q MAK
Sbjct: 26 HEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQALAEADKRRYEQDMAK--------- 76
Query: 249 LLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALL 308
Y+ K + ++ +K+KDP PK ++A+F++ ++ R +
Sbjct: 77 -----------------YVPPK--GAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVR 117
Query: 309 ADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
A + + V ++AKI G++WK +++ K YE+ A+ K +Y +E+ YKR
Sbjct: 118 AAHPDFQVGDIAKILGKQWKEISDSDKAKYEKKAQTEKARYQKELAEYKR 167
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KR + ++C D + + +P+ + +I ILG +WK +S +K YE+
Sbjct: 90 RKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGDIAKILGKQWKEISDSDKAKYEK 149
Query: 225 KYQAEKEAYLQVMAKERRESEA 246
K Q EK Y + +A+ +R
Sbjct: 150 KAQTEKARYQKELAEYKRSGGG 171
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Query: 273 ADKENKKPK--------KEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITG 322
A KE K+PK ++KDP PK ++AY F++E R + ++N +V +V +I G
Sbjct: 3 ATKEAKQPKEPKKRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDVTFGQVGRILG 62
Query: 323 EEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
E WK +T E+K+PYE A+ +K++Y E E Y
Sbjct: 63 ERWKALTAEEKQPYESKAQADKKRYESEKELY 94
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG +WK ++AEEK+
Sbjct: 15 KRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEKQ 74
Query: 221 PYEEKYQAEKEAY 233
PYE K QA+K+ Y
Sbjct: 75 PYESKAQADKKRY 87
>gi|343425092|emb|CBQ68629.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 290
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 207 LGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQY 266
+GA+W ++ K YE +++ EKE Y + +A+ + L E+ K++ A
Sbjct: 149 VGAEWAQLAPNLKARYEAQHEQEKEEYERALAEWK-----AALSPEDIKRQNAY------ 197
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWK 326
+ K K +DP KPK P +A+F F ++ RA+ A N+ E +K GE WK
Sbjct: 198 --IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRASE-AVIPNITEFSKRGGERWK 254
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
M+ EQK PYE+ A + E+Y ++E Y
Sbjct: 255 QMSAEQKAPYEQRALQALEQYKRDLEIY 282
>gi|384493812|gb|EIE84303.1| hypothetical protein RO3G_09013 [Rhizopus delemar RA 99-880]
Length = 252
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPY 336
K K+++DP PK P + Y + + RA + + + + +E +KI GE WK +++ +K+PY
Sbjct: 51 KGKRKRDPDFPKQPTSNYLFYCNSIRADVDKEFPSASFVEKSKIYGERWKKLSDAEKKPY 110
Query: 337 EEIAKKNKEKYNEEMEAYKR 356
E+A+K KE+YN E+E Y++
Sbjct: 111 NEMAQKEKERYNRELETYEK 130
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 155 VQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNV 214
+K++ ++K+ K+P+ Y+ +C + KE P A F E + I G +WK +
Sbjct: 43 TNGFNNKDKGKRKRDPDFPKQPTSNYLFYCNSIRADVDKEFPSASFVEKSKIYGERWKKL 102
Query: 215 SAEEKKPYEEKYQAEKEAY 233
S EKKPY E Q EKE Y
Sbjct: 103 SDAEKKPYNEMAQKEKERY 121
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|427780835|gb|JAA55869.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 508
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 47/209 (22%)
Query: 154 IVQCLKDKEQDRKKKGCAERKRPSPPYIL---WCKDQWNEAKKENPEAEFKEITNILGAK 210
+ LK K+ K G KR + YI W +++ ++ ++ P + K
Sbjct: 162 VTGKLKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPR--IGDFGKECAGK 219
Query: 211 WKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFK 270
W +S E+K+P+ L A++R E +K++ A+
Sbjct: 220 WNTMSDEDKQPF-----------LSAAARDR----------ERYKREMAVY--------- 249
Query: 271 QEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNM 328
K +D KPK P TA+ LF + R + V +AK+ GE W++M
Sbjct: 250 ----------KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSM 299
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
+EE KRPY E + K KY + ME Y+R+
Sbjct: 300 SEEDKRPYVERQNEEKMKYEQNMEEYRRK 328
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 54 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 113
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
K K +YN+ M AY +++ +
Sbjct: 114 AKRKAEYNKTMVAYNKKLAD 133
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 39/179 (21%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E K +NPE F E + +WK +S +EK +E+ QA+++
Sbjct: 19 FVQTCRE---EHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFED--QAKQD------ 67
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E + K A+ KDP PK P + +F
Sbjct: 68 -KARYDLEMTSYGPPGKRGKKAL-----------------------KDPNAPKRPPSGFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+F +E+R + A + N + +VAK GE W N+T+ K+PY A K KEKY +++ Y
Sbjct: 104 VFCAEQRPKIKAQHPNFGIGDVAKKLGEMWNNLTDSNKQPYLAKANKLKEKYQKDVADY 162
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F + + +WK++SA+EK +E+ + +K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFEDLAKGDKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K++KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGET-----KGKRKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + ++ + + AK GE W T + K P+E+ A K KEKY +++ AY+
Sbjct: 105 IFCSEHRPQIKSETPGLSIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
>gi|291404341|ref|XP_002718409.1| PREDICTED: transcription factor A-like [Oryctolagus cuniculus]
Length = 230
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 17/190 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NPEA+ E+ + W+ + EKK YE+ Y+ E EAY
Sbjct: 35 KKPMTSYLRFSKEQLPIFKAKNPEAKNSELIKRIAELWRELPDSEKKVYEDAYRVEWEAY 94
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ +++ +EH + M +E+ + K+ K K ++ KPK P
Sbjct: 95 KEEISR-----------IQEHLTPSQMLSMEKEIMQKRLKKKALMKKRELTMLGKPKRPR 143
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+AY +F SE + K+ AK+ + WKN+ QK+ Y ++AK +K +Y+ EM
Sbjct: 144 SAYNIFVSES----FQEAKDGSSQAKLKAVNDNWKNLPSSQKQVYIQLAKDDKIRYDNEM 199
Query: 352 EAYKRRMKEL 361
++++ +M E+
Sbjct: 200 KSWEEQMVEV 209
>gi|427793707|gb|JAA62305.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 529
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 47/209 (22%)
Query: 154 IVQCLKDKEQDRKKKGCAERKRPSPPYIL---WCKDQWNEAKKENPEAEFKEITNILGAK 210
+ LK K+ K G KR + YI W +++ ++ ++ P + K
Sbjct: 183 VTGKLKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPR--IGDFGKECAGK 240
Query: 211 WKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFK 270
W +S E+K+P+ L A++R E +K++ A+
Sbjct: 241 WNTMSDEDKQPF-----------LSAAARDR----------ERYKREMAVY--------- 270
Query: 271 QEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNM 328
K +D KPK P TA+ LF + R + V +AK+ GE W++M
Sbjct: 271 ----------KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSM 320
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
+EE KRPY E + K KY + ME Y+R+
Sbjct: 321 SEEDKRPYVERQNEEKMKYEQNMEEYRRK 349
>gi|42572635|ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis thaliana]
gi|332645335|gb|AEE78856.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 185
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYE 337
K +KDP KPK +A+F+F + R +N NV V K G++WK+M++ +K PYE
Sbjct: 45 KAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYE 104
Query: 338 EIAKKNKEKYNEEMEAYKRRMKE 360
E A K K +Y ++M+AY + ++E
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNLEE 127
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 271 QEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWK 326
+ A K++K+ KK DP PK +++Y F+ E+RA L+ DN ++V V K+ G W
Sbjct: 7 KSAGKKSKRAKK--DPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWN 64
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
++ E +K PYE++A+ ++ +Y +E AY
Sbjct: 65 SLDESEKAPYEKLAEADRARYEKEKAAY 92
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 35/180 (19%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P F E + +WK +SA+EK +E+ + +K + + M
Sbjct: 16 YAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDLAKGDKVRFDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K K++KDP PK P +A+F
Sbjct: 76 --------------------------KGYV-----PPKGTKVGKRKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F S+ RA + ++ + ++AK GE W T + K PYE A K KEKY +++ AY+
Sbjct: 105 VFCSDHRARIKGEHPGISIGDIAKKLGELWSKQTPKDKVPYEAKAGKLKEKYEKDVAAYR 164
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KP+ ++Y F E + + N E +K E WK M+ ++K +E++
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +++ EM+ Y
Sbjct: 64 AKGDKVRFDREMKGY 78
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D K E+P +I LG W + ++K PYE K KE Y
Sbjct: 97 KRPPSAFFVFCSDHRARIKGEHPGISIGDIAKKLGELWSKQTPKDKVPYEAKAGKLKEKY 156
Query: 234 LQVMAKERRESEA 246
+ +A R +S A
Sbjct: 157 EKDVAAYRAKSGA 169
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 41 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 100
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 101 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 128
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 129 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 188
Query: 356 RRMK 359
+ K
Sbjct: 189 AKGK 192
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 121 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 180
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 181 EKDIAAYR 188
>gi|256080078|ref|XP_002576310.1| structure specific recognition protein [Schistosoma mansoni]
gi|350646026|emb|CCD59303.1| structure specific recognition protein,putative [Schistosoma
mansoni]
Length = 632
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERR---AALLADNKNVLEVAKITGEEWK 326
KQ + ++ KK KK KDP P P++AYFL+ +E R A L +V EVAK GE W+
Sbjct: 527 KQPSKRQTKKQKKPKDPNAPTRPLSAYFLWFNENREKIAKNLGGQNSVAEVAKAAGEIWR 586
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
NM K Y+ + K+KY E++ Y+ +
Sbjct: 587 NMDSTAKSSYQSRVDELKKKYQEDLRIYQSNL 618
>gi|15231065|ref|NP_190756.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|145332807|ref|NP_001078269.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|75274976|sp|O49595.1|HMGB1_ARATH RecName: Full=High mobility group B protein 1; AltName: Full=High
mobility group protein A; Short=AtHMGalpha; Short=HMG
alpha; AltName: Full=Nucleosome/chromatin assembly
factor group D 01; Short=Nucleosome/chromatin assembly
factor group D 1
gi|2832357|emb|CAA74400.1| HMG protein [Arabidopsis thaliana]
gi|3068715|gb|AAC14415.1| unknown [Arabidopsis thaliana]
gi|15912191|gb|AAL08229.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|21360557|gb|AAM47475.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|332645334|gb|AEE78855.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645336|gb|AEE78857.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 178
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYE 337
K +KDP KPK +A+F+F + R +N NV V K G++WK+M++ +K PYE
Sbjct: 45 KAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYE 104
Query: 338 EIAKKNKEKYNEEMEAYKRRMKE 360
E A K K +Y ++M+AY + ++E
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNLEE 127
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 68 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 123
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 124 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 153
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 154 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 213
Query: 356 RRMK 359
+ K
Sbjct: 214 SKGK 217
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 146 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 205
>gi|391345046|ref|XP_003746804.1| PREDICTED: high mobility group protein DSP1-like [Metaseiulus
occidentalis]
Length = 186
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKR 334
K +KEKDP PK ++A+F F + R + A+ V EVAK G++W+ T EQK
Sbjct: 84 GKAARKEKDPNAPKRALSAFFHFCQDERPKVRAELGQSTVGEVAKQLGKKWQECTGEQKS 143
Query: 335 PYEEIAKKNKEKYNEEMEAYK 355
YE++A K+K++Y EM AYK
Sbjct: 144 KYEQLAAKDKQRYELEMAAYK 164
>gi|392300930|gb|EIW12019.1| Nhp6bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 162
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Query: 273 ADKENKKPK--------KEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITG 322
A KE K+PK ++KDP PK ++AY F++E R + ++N +V +V +I G
Sbjct: 66 ATKEAKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILG 125
Query: 323 EEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
E WK +T E+K+PYE A+ +K++Y E E Y
Sbjct: 126 ERWKALTAEEKQPYESKAQADKKRYESEKELY 157
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG +WK ++AEEK+
Sbjct: 78 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEKQ 137
Query: 221 PYEEKYQAEKEAY 233
PYE K QA+K+ Y
Sbjct: 138 PYESKAQADKKRY 150
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 30/184 (16%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++PE + F+E + +WK +S EKK + E AEK+
Sbjct: 118 YAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHE--MAEKD------ 169
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ++E ++ Y K E KK K KD PK ++A+F
Sbjct: 170 -KKRYDTE-----------------MQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFF 211
Query: 298 LFSSERRAA--LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R +L V ++AK G++W + E K YE +A+K+K +Y EM AYK
Sbjct: 212 WFCNDERGKVKMLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYK 271
Query: 356 RRMK 359
++M+
Sbjct: 272 KKMQ 275
>gi|207080180|ref|NP_001128829.1| DKFZP459C0539 protein [Pongo abelii]
gi|55729939|emb|CAH91696.1| hypothetical protein [Pongo abelii]
Length = 376
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDARSVVTTARM 189
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ L +
Sbjct: 160 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKL 207
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 208 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 244
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+
Sbjct: 245 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYR 304
Query: 356 RRMK 359
+ K
Sbjct: 305 NKGK 308
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRPS + ++C D + K E P ++ LG KW N++AE+K PY
Sbjct: 237 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 285
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 284 KDPLKPKHPVTAYFLFSSERR---------AALLADNKNVLEVAKITGEEWKNMTEEQKR 334
KDP KP+ +++Y F R A++ N E +K E WK M+ ++K
Sbjct: 145 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASV-----NFSEFSKKCSERWKTMSAKEKG 199
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
+E++AK +K +Y EM +Y
Sbjct: 200 KFEDLAKLDKVRYEREMRSY 219
>gi|395532484|ref|XP_003768300.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Sarcophilus
harrisii]
Length = 426
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|338711933|ref|XP_003362620.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Equus
caballus]
Length = 376
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|334322983|ref|XP_001369760.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like
[Monodelphis domestica]
Length = 412
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ + +K Y + M
Sbjct: 7 FVQTCRE---EHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYEREM 63
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K+ KDP PK P +A+F
Sbjct: 64 --------------------------KNYIPPKGE------KKKRFKDPNAPKRPPSAFF 91
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + + + +VAK GE W + E+K+P+E+ A + KEKY +++ AY+
Sbjct: 92 IFCSEFRPKVKEETPGLSIGDVAKKLGEMWNKTSAEEKQPFEKKAARLKEKYEKDITAYR 151
Query: 356 RRMK 359
+ K
Sbjct: 152 SKGK 155
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C + + K+E P ++ LG W SAEEK+P+E+K KE Y
Sbjct: 84 KRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKKLGEMWNKTSAEEKQPFEKKAARLKEKY 143
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRPS + ++C D + K E P ++ LG KW N++AE+K PY
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
>gi|334185909|ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645337|gb|AEE78858.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 161
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYE 337
K +KDP KPK +A+F+F + R +N NV V K G++WK+M++ +K PYE
Sbjct: 45 KAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYE 104
Query: 338 EIAKKNKEKYNEEMEAYKRRMKE 360
E A K K +Y ++M+AY + ++E
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNLEE 127
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+ F+E + +WK +S +EKK + E AEK+
Sbjct: 247 YAFFVQTCRQEHKKKHPDENIVFQEFSKKCALRWKTMSDKEKKRFHE--MAEKD------ 298
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQE-ADKENKKPKKEKDPLKPKHPVTAY 296
K+R ++E ++ Y+ K E KK K KDP PK ++A+
Sbjct: 299 -KKRYDTE-----------------MQSYIPPKGEKVTGRGKKRKHIKDPNAPKRSLSAF 340
Query: 297 FLFSSERRAA--LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
F F ++ R +L V ++AK G++W + E K YE +A+K+K +Y EM AY
Sbjct: 341 FWFCNDERGKVKMLNPEYGVGDIAKELGKKWSDAGPELKGKYEAMAEKDKARYEREMTAY 400
Query: 355 KRRMKE 360
K++ K+
Sbjct: 401 KKKQKD 406
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y L+ + E KK++PE F E + +WK +SA+EK +EE L
Sbjct: 31 YALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEE---------LSKE 81
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ESE ++ Y+ K KK KK+KDP PK P + +F
Sbjct: 82 DKKRYESE-----------------MKDYV-----PPKGAKKQKKKKDPNAPKRPPSGFF 119
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+FS+ R + ++ ++AK GE+W M E+K PYE+ A K KEKY +++ AY+
Sbjct: 120 IFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYR 179
Query: 356 RRMK 359
+ K
Sbjct: 180 AKTK 183
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
ER ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 --ERE--------------------MKTYIPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|426237945|ref|XP_004012918.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Ovis aries]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E KK KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ V +VAK G+ W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSVGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSVGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 273 ADKENKKPKK---EKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKN 327
A K++ KP+K +KDP+ PK ++AY F++E+R + +N V +V KI GE WK
Sbjct: 5 ATKKSAKPEKRRAKKDPMAPKRGLSAYMFFANEQRDNVREENPGVTFGQVGKILGERWKA 64
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAY 354
++++Q+ PY+ A +K++Y +E AY
Sbjct: 65 LSDKQRAPYDAKAAADKKRYEDEKAAY 91
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 162 EQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP 221
E+ R KK KR Y+ + +Q + ++ENP F ++ ILG +WK +S +++ P
Sbjct: 13 EKRRAKKDPMAPKRGLSAYMFFANEQRDNVREENPGVTFGQVGKILGERWKALSDKQRAP 72
Query: 222 YEEKYQAEKEAY 233
Y+ K A+K+ Y
Sbjct: 73 YDAKAAADKKRY 84
>gi|344285474|ref|XP_003414486.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Loxodonta
africana]
Length = 473
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 134 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 193
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 194 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 248
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 249 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 286
>gi|149723846|ref|XP_001500209.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Equus caballus]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|403304559|ref|XP_003942863.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Saimiri boliviensis boliviensis]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|395826460|ref|XP_003786436.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Otolemur garnettii]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|73965999|ref|XP_863005.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 8
[Canis lupus familiaris]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|390478817|ref|XP_002762012.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like isoform
2 [Callithrix jacchus]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQK-TAMELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSHMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|426237947|ref|XP_004012919.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Ovis aries]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|313224350|emb|CBY20139.1| unnamed protein product [Oikopleura dioica]
Length = 91
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAA---LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP PK P TA+FLF+++ RA L + V EVAK G WK + + K Y+ A
Sbjct: 6 KDPNAPKRPQTAFFLFAADNRADAKKCLPEGSRVSEVAKKLGVMWKEVDAKTKEKYQSQA 65
Query: 341 KKNKEKYNEEMEAYK 355
++NK KY EEMEAY+
Sbjct: 66 EENKAKYAEEMEAYR 80
>gi|395826456|ref|XP_003786434.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Otolemur garnettii]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|296202792|ref|XP_002748613.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Callithrix jacchus]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|281344615|gb|EFB20199.1| hypothetical protein PANDA_014411 [Ailuropoda melanoleuca]
Length = 394
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 55 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 114
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 115 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 169
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 170 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 207
>gi|73965989|ref|XP_851010.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Canis lupus familiaris]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|397522855|ref|XP_003831464.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 3
[Pan paniscus]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|410981045|ref|XP_003996883.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Felis
catus]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y L+ + E KK++PE F E + +WK +SA+EK +EE L
Sbjct: 31 YALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEE---------LSKE 81
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ESE ++ Y+ K KK KK+KDP PK P + +F
Sbjct: 82 DKKRYESE-----------------MKDYV-----PPKGAKKQKKKKDPNAPKRPPSGFF 119
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+FS+ R + ++ ++AK GE+W M E+K PYE+ A K KEKY +++ AY+
Sbjct: 120 IFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYR 179
Query: 356 RRMK 359
+ K
Sbjct: 180 AKTK 183
>gi|403304555|ref|XP_003942861.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|345805404|ref|XP_862912.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Canis lupus familiaris]
Length = 393
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|332847655|ref|XP_003315497.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Pan
troglodytes]
gi|169793989|gb|ACA81391.1| Smarce1 variant 3 [Homo sapiens]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|443897570|dbj|GAC74910.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 280
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 207 LGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQY 266
+GA+W + +K YE +++ EKE Y + +A+ + L ++ K++ A
Sbjct: 139 VGAEWAQLPPNQKARYEAQHEQEKEEYERALAEWK-----AALSPDDIKRQNAY------ 187
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWK 326
+ K K +DP KPK P +A+F F ++ RA+ + N+ E +K GE WK
Sbjct: 188 --IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRASE-SVIPNITEFSKRGGERWK 244
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
MT +QK PYE+ A + E+Y ++E Y
Sbjct: 245 QMTPDQKAPYEQRALQALEQYKRDLEVY 272
>gi|397522851|ref|XP_003831462.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Pan paniscus]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|291387730|ref|XP_002710388.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin e1 [Oryctolagus cuniculus]
Length = 411
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADK------- 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
A+ RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 69 ARYERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|426348397|ref|XP_004041823.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Gorilla
gorilla gorilla]
Length = 411
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +W+ +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRPS + ++C D + K E P ++ LG KW N++AE+K PY
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
>gi|149642767|ref|NP_001092586.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Bos taurus]
gi|148745040|gb|AAI42471.1| SMARCE1 protein [Bos taurus]
gi|296476367|tpg|DAA18482.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin e1 [Bos taurus]
Length = 415
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|444729825|gb|ELW70228.1| High mobility group protein B1 [Tupaia chinensis]
Length = 141
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P +A+FLF SE R + + + + +VAK GE W N + K+PYE+
Sbjct: 25 KKFKDPSAPKRPPSAFFLFCSEYRPEIKGERPGRFIGDVAKRLGEMWNNTAADGKQPYEK 84
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
A K K KY +++ AY+ + K
Sbjct: 85 NAAKLKGKYEKDIAAYRAKGK 105
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
KRP + L+C + E K E P ++ LG W N +A+ K+PYE+ KY
Sbjct: 34 KRPPSAFFLFCSEYRPEIKGERPGRFIGDVAKRLGEMWNNTAADGKQPYEKNAAKLKGKY 93
Query: 227 QAEKEAY 233
+ + AY
Sbjct: 94 EKDIAAY 100
>gi|21264355|ref|NP_003070.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Homo sapiens]
gi|386782153|ref|NP_001248235.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|114667531|ref|XP_511478.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 7
[Pan troglodytes]
gi|332258461|ref|XP_003278319.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Nomascus
leucogenys]
gi|402900116|ref|XP_003913026.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Papio
anubis]
gi|61247587|sp|Q969G3.2|SMCE1_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1; AltName:
Full=BRG1-associated factor 57; Short=BAF57
gi|2914753|gb|AAC04509.1| BAF57 [Homo sapiens]
gi|39645807|gb|AAH63700.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|119581074|gb|EAW60670.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1, isoform CRA_a [Homo
sapiens]
gi|119581075|gb|EAW60671.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1, isoform CRA_a [Homo
sapiens]
gi|193786044|dbj|BAG50933.1| unnamed protein product [Homo sapiens]
gi|193787772|dbj|BAG52975.1| unnamed protein product [Homo sapiens]
gi|380815820|gb|AFE79784.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|383420971|gb|AFH33699.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|384948944|gb|AFI38077.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Macaca mulatta]
gi|410227474|gb|JAA10956.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
gi|410262366|gb|JAA19149.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
gi|410302428|gb|JAA29814.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
gi|410342573|gb|JAA40233.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Pan troglodytes]
Length = 411
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
ER ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 --ERE--------------------MKTYIPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGKHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|13937941|gb|AAH07082.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|15029623|gb|AAH11017.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|30583191|gb|AAP35840.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Homo sapiens]
gi|61361536|gb|AAX42063.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e member 1 [synthetic construct]
gi|61361541|gb|AAX42064.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e member 1 [synthetic construct]
gi|123979618|gb|ABM81638.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|123993611|gb|ABM84407.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|123994437|gb|ABM84820.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|123999682|gb|ABM87381.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
gi|261861652|dbj|BAI47348.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [synthetic construct]
Length = 411
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|351698715|gb|EHB01634.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1, partial [Heterocephalus
glaber]
Length = 411
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|296202790|ref|XP_002748612.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Callithrix jacchus]
Length = 411
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|395826462|ref|XP_003786437.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Otolemur garnettii]
Length = 393
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|338711935|ref|XP_003362621.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Equus
caballus]
Length = 393
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|301779135|ref|XP_002925003.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Ailuropoda melanoleuca]
Length = 467
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 128 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 187
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 188 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 242
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 243 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 280
>gi|440904264|gb|ELR54803.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1, partial [Bos grunniens
mutus]
Length = 415
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|10181166|ref|NP_065643.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Mus musculus]
gi|55977468|sp|O54941.1|SMCE1_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1; AltName:
Full=BRG1-associated factor 57; Short=BAF57
gi|2914755|gb|AAC04510.1| BAF57 [Mus musculus]
gi|28502972|gb|AAH47141.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Mus musculus]
gi|38181916|gb|AAH61498.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Mus musculus]
gi|40787818|gb|AAH65043.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Mus musculus]
gi|148684236|gb|EDL16183.1| mCG15366, isoform CRA_c [Mus musculus]
Length = 411
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|30585419|gb|AAP36982.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily e, member 1 [synthetic
construct]
gi|60653639|gb|AAX29513.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e, member 1 [synthetic construct]
gi|60653641|gb|AAX29514.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily e, member 1 [synthetic construct]
Length = 412
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|403304561|ref|XP_003942864.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 393
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|403304557|ref|XP_003942862.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 341
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|197102747|ref|NP_001127230.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Pongo abelii]
gi|55726577|emb|CAH90055.1| hypothetical protein [Pongo abelii]
gi|194378168|dbj|BAG57834.1| unnamed protein product [Homo sapiens]
Length = 393
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y L+ + E KK++PE F E + +WK +SA+EK +EE L
Sbjct: 31 YALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEE---------LSKE 81
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ESE ++ Y+ K KK KK+KDP PK P + +F
Sbjct: 82 DKKRYESE-----------------MKDYV-----PPKGAKKQKKKKDPNAPKRPPSGFF 119
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+FS+ R + ++ ++AK GE+W M E+K PYE+ A K KEKY +++ AY+
Sbjct: 120 IFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYR 179
Query: 356 RRMK 359
+ K
Sbjct: 180 AKTK 183
>gi|114667539|ref|XP_001169953.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Pan troglodytes]
gi|169793993|gb|ACA81393.1| Smarce1 variant 5 [Homo sapiens]
gi|194376758|dbj|BAG57525.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|149054157|gb|EDM05974.1| rCG34563, isoform CRA_b [Rattus norvegicus]
Length = 411
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|148745056|gb|AAI42509.1| SMARCE1 protein [Bos taurus]
Length = 376
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|296202788|ref|XP_002748611.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 1
[Callithrix jacchus]
Length = 393
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|291406002|ref|XP_002719406.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin e1 [Oryctolagus cuniculus]
Length = 393
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E K+++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|327275491|ref|XP_003222507.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Anolis
carolinensis]
Length = 412
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|397522853|ref|XP_003831463.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Pan paniscus]
Length = 341
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK G+ W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK G+ W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
K++KDP PK ++AY F+++ R + DN + EV K+ GE WK + E+QK PYE
Sbjct: 22 KRKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIKFGEVGKLLGERWKALNEKQKAPYEA 81
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y EE AY
Sbjct: 82 KAAADKKRYEEEKAAY 97
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + D ++ +++NP +F E+ +LG +WK ++ ++K PYE K A+K+ Y
Sbjct: 31 KRGLSAYMFFANDTRDKVREDNPGIKFGEVGKLLGERWKALNEKQKAPYEAKAAADKKRY 90
>gi|395826458|ref|XP_003786435.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 2
[Otolemur garnettii]
Length = 341
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R D NK+V V K G++WK+++E +K PY A+
Sbjct: 31 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKAE 90
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K +Y + M+AY +R E
Sbjct: 91 KRKVEYEKNMKAYNKRQAE 109
>gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Physcomitrella patens]
Length = 165
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKRPYEEIAK 341
DP PK P TA+F+F +E R +N NV VA + GE+WK+M+E +K+PY + A
Sbjct: 53 DPNAPKRPATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAV 112
Query: 342 KNKEKYNEEMEAYKRR 357
+ K +Y++ + AY ++
Sbjct: 113 QKKSEYDKTLSAYNKK 128
>gi|444714024|gb|ELW54912.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Tupaia chinensis]
Length = 415
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 90 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 145
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y K KK+KDP PK P + +F
Sbjct: 146 ---DRE-------------------MKDY--------GPAKGGKKKKDPNAPKRPPSGFF 175
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 176 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 235
Query: 356 RRMK 359
+ K
Sbjct: 236 SKGK 239
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 168 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 227
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY ++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEMDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+A R
Sbjct: 156 EMDIAAYR 163
>gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681870|gb|EDQ68293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKRPYEEIAK 341
DP PK P TA+F+F +E R +N NV VA + GE+WK+M+E +K+PY + A
Sbjct: 53 DPNAPKRPATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAV 112
Query: 342 KNKEKYNEEMEAYKRR 357
+ K +Y++ + AY ++
Sbjct: 113 QKKSEYDKTLSAYNKK 128
>gi|148669729|gb|EDL01676.1| mCG1025710 [Mus musculus]
Length = 178
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + W E KK++P+A F E + +W+ +SA+EK E+ +A+K Y
Sbjct: 23 YAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWETMSAKEKGKCEDMAKADKAHY---- 78
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT F E KK K KD PK P +A+F
Sbjct: 79 ---------------EREMKTT---------FHHPPKAETKK--KFKDRNAPKRPSSAFF 112
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+ YE+ AK KEKY +++ AY+
Sbjct: 113 LFCSEYRPKIKGESPGLSIGDVAKKLGEMWNNTAADDKQLYEKAAKL-KEKYKKDIAAYR 171
Query: 356 RRMK 359
+ K
Sbjct: 172 AKGK 175
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE------EKYQ 227
KRPS + L+C + + K E+P ++ LG W N +A++K+ YE EKY+
Sbjct: 105 KRPSSAFFLFCSEYRPKIKGESPGLSIGDVAKKLGEMWNNTAADDKQLYEKAAKLKEKYK 164
Query: 228 AEKEAY 233
+ AY
Sbjct: 165 KDIAAY 170
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAHY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ ++ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTFIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 30 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKVRY---- 85
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E KK KDP PK P +A+F
Sbjct: 86 ---------------EREMKT-------YIPPKGETK------KKFKDPNAPKRPPSAFF 117
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 118 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 177
Query: 356 RRMK 359
+ K
Sbjct: 178 AKGK 181
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 110 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 169
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 170 EKDIAAYR 177
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRP 335
++ K+EKDP PK P++AY FS + R + +N V E+ ++ G +WK++ EE+K+P
Sbjct: 2 RRVKREKDPNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKP 61
Query: 336 YEEIAKKNKEKYNEEMEAYKR 356
YE++A ++K+++ E Y+R
Sbjct: 62 YEDMACRDKKRHETEKAEYER 82
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
KRP Y+ + +D K ENPE F EI +LG KWK++ EEKKPYE+
Sbjct: 14 KRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYED 64
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKVETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRPS + ++C D + K E P ++ LG KW N++AE+K PY
Sbjct: 95 KRPSSAFFIFCADFRPQVKVETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 4 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 59
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 60 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 91
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 92 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 151
Query: 356 RRMK 359
+ K
Sbjct: 152 AKGK 155
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 84 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 143
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 144 EKDIAAYR 151
>gi|387014382|gb|AFJ49310.1| WI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1-like [Crotalus
adamanteus]
Length = 412
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 4 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 59
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 60 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 91
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 92 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 151
Query: 356 RRMK 359
+ K
Sbjct: 152 AKGK 155
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 84 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 143
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 144 EKDIAAYR 151
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGNVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGNVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|68163423|ref|NP_001020164.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Rattus norvegicus]
gi|81888093|sp|Q56A18.1|SMCE1_RAT RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1; AltName:
Full=BRG1-associated factor 57; Short=BAF57
gi|62089562|gb|AAH92210.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Rattus norvegicus]
Length = 376
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|431890659|gb|ELK01538.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Pteropus alecto]
Length = 690
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 351 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 410
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 411 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 465
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 466 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 503
>gi|53129001|emb|CAG31353.1| hypothetical protein RCJMB04_5f21 [Gallus gallus]
Length = 412
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|401415962|ref|XP_003872476.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488700|emb|CBZ23947.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 300
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 28/178 (15%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PYI++ + + K ++P+ + E+ + +G WK V+ EEK Y++ +K Y + MA
Sbjct: 120 PYIIFVNENREKLKAKHPDMKNTELLSEMGNLWKKVTEEEKSRYQKLADEDKLRYDREMA 179
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFL 298
A+ FK+ K K KEKDP PK +TAYF
Sbjct: 180 AYIARGGAV---------------------FKRGGKKAKKA-SKEKDPKAPKRALTAYFF 217
Query: 299 FSSERRAALLADNKNVLEVAKIT--GEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
F+S+ R A + N+ ++T G W M+ E+K+PYEE+A K+K++Y E +
Sbjct: 218 FASDYR----AKHANIPAKQQMTEAGAAWGKMSAEEKKPYEELAAKDKKRYEAECSGH 271
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA---DNKNVLEVAKITGEEWK 326
K+ DKE+ + K++K PK ++ Y +F +E R L A D KN E+ G WK
Sbjct: 95 KKSKDKESARGKEKKPDDYPKGALSPYIIFVNENREKLKAKHPDMKNT-ELLSEMGNLWK 153
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKELL 362
+TEE+K Y+++A ++K +Y+ EM AY R +
Sbjct: 154 KVTEEEKSRYQKLADEDKLRYDREMAAYIARGGAVF 189
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +W+ +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRPS + ++C D + K E P ++ LG KW N++AE+K PY
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
>gi|348562680|ref|XP_003467137.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Cavia
porcellus]
Length = 746
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK
Sbjct: 407 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 466
Query: 231 -----EAYLQ-VMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKE 283
AYL + AK R E+ LEEE +Q+ + ME E Y+ + D P
Sbjct: 467 AYHNSPAYLAYINAKSRAEA----ALEEESRQRQSRMEKGEPYMSIQPAED-----PDDY 517
Query: 284 KDPLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
D KH TA F L S +++ D ++V+ A++
Sbjct: 518 DDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 559
>gi|306518680|ref|NP_001006335.2| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Gallus gallus]
gi|326934129|ref|XP_003213147.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Meleagris
gallopavo]
Length = 412
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|148684235|gb|EDL16182.1| mCG15366, isoform CRA_b [Mus musculus]
Length = 341
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|149054158|gb|EDM05975.1| rCG34563, isoform CRA_c [Rattus norvegicus]
Length = 341
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|449490998|ref|XP_002194035.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 [Taeniopygia
guttata]
Length = 394
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 169 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|449267621|gb|EMC78542.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1, partial [Columba livia]
Length = 406
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 67 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 126
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 127 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 181
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 182 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 219
>gi|402880797|ref|XP_003903978.1| PREDICTED: transcription factor A, mitochondrial isoform 1 [Papio
anubis]
Length = 237
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 13/188 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q + +NP+A+ E+ + W+ + EKK Y+E Y+A+ E Y
Sbjct: 51 KKPVSSYLRFSKEQLPIFRAQNPDAKTTELVRRIAKHWRELPDSEKKVYQEAYKADWEVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ +++ + E + + LE+ + K+ K K K+ KPK P
Sbjct: 111 KEEISRFK-----------EQLTPSEITSLEKEILDKRLKRKAVTKRKELIQLGKPKRPR 159
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+AY ++ +ER D+ E K E WKN+++ +K Y ++AK+++ +Y+ EM++
Sbjct: 160 SAYNVYVAERFQEAEGDSPQ--EKLKTVKENWKNLSDSEKEIYIQLAKEDEIRYHNEMKS 217
Query: 354 YKRRMKEL 361
++ RM E+
Sbjct: 218 WEERMIEI 225
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK PV++Y FS E+ A N + E+ + + W+ + + +K+ Y+E K + E
Sbjct: 50 PKKPVSSYLRFSKEQLPIFRAQNPDAKTTELVRRIAKHWRELPDSEKKVYQEAYKADWEV 109
Query: 347 YNEEMEAYKRRM 358
Y EE+ +K ++
Sbjct: 110 YKEEISRFKEQL 121
>gi|312378819|gb|EFR25283.1| hypothetical protein AND_09522 [Anopheles darlingi]
Length = 527
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 36/210 (17%)
Query: 154 IVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAE--FKEITNILGAKW 211
+ K +D K +G R ++ C++ E KK++PE + F E + +W
Sbjct: 257 VANVTGGKVKDNKPRG---RMTAYAFFVQTCRE---EHKKKHPEEQVIFAEFSRKCAERW 310
Query: 212 KNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQ 271
K + +EK+ + E + E+ KQ+ +E+ + Y+ K
Sbjct: 311 KTMLDKEKQRFHE-------------------------MAEKDKQRYELEM-QSYVPPKG 344
Query: 272 EADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMT 329
KK K+ KDP PK ++A+F F + R + A N V ++AK G +W +M
Sbjct: 345 AVVGRGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKALNPEYGVGDIAKELGRKWSDMD 404
Query: 330 EEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
E K+ YE++A+K+K++Y +EM YK + K
Sbjct: 405 AEIKQKYEQMAEKDKQRYEQEMTEYKLKCK 434
>gi|226479042|emb|CAX73016.1| structure specific recognition protein 1 [Schistosoma japonicum]
Length = 679
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERR---AALLADNKNVLEVAKITGEEWKNMTEE 331
++ KK +K KDP P P++AYFL+ +E R A L+ +V EVAK GE W+NM E
Sbjct: 581 RQTKKQEKPKDPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRNMDSE 640
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKRRM 358
K Y+ + K+KY E++ Y+ +
Sbjct: 641 TKSTYQSRVDELKKKYQEDLRVYQSNL 667
>gi|344274550|ref|XP_003409078.1| PREDICTED: transcription factor A, mitochondrial-like [Loxodonta
africana]
Length = 248
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 98/192 (51%), Gaps = 21/192 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q K +NP+A+ E+ + W+++ EKK YE+ Y+A+ +AY
Sbjct: 51 KKPLSSYLRFSTEQLPIFKAQNPDAKNSELIKKIAQLWRDLPDSEKKVYEDAYRADWQAY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL--KPKH 291
E + ++E Q T +++ + Q+ K KK + + KPK
Sbjct: 111 ----------KEEVNRIQE---QLTPSQIVSMEKEIMQKRLKRKALIKKRELTMLGKPKR 157
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P TAY +F SE + K+ AK+ E WKN++ QK+ Y ++AK +K +Y+
Sbjct: 158 PRTAYNIFISES----FQEAKDASSQAKMKTVNENWKNLSSSQKQVYIQLAKDDKIRYDN 213
Query: 350 EMEAYKRRMKEL 361
EM+ ++ +M E+
Sbjct: 214 EMKLWEAQMIEV 225
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPLAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPLAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|27450225|gb|AAO14565.1|AF462604_2 HMG-L6 [Mus musculus]
Length = 199
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 177 SPPYILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
+ Y + + W E KK++P+A F E + +W+ +SA+EK E+ +A+K Y
Sbjct: 20 TSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWETMSAKEKGKCEDMAKADKAHY- 78
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
E + KT F E KK K KD PK P +
Sbjct: 79 ------------------EREMKTT---------FHHPPKAETKK--KFKDRNAPKRPSS 109
Query: 295 AYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
A+FLF SE R + ++ + +VAK GE W N + K+ YE+ AK KEKY +++
Sbjct: 110 AFFLFCSEYRPKIKGESPGLSIGDVAKKLGEMWNNTAADDKQLYEKAAKL-KEKYKKDIA 168
Query: 353 AYKRRMK 359
AY+ + K
Sbjct: 169 AYRAKGK 175
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE------EKYQ 227
KRPS + L+C + + K E+P ++ LG W N +A++K+ YE EKY+
Sbjct: 105 KRPSSAFFLFCSEYRPKIKGESPGLSIGDVAKKLGEMWNNTAADDKQLYEKAAKLKEKYK 164
Query: 228 AEKEAY 233
+ AY
Sbjct: 165 KDIAAY 170
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 45/189 (23%)
Query: 174 KRPSPPYILWC---KDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK 230
KRP+ Y+ + ++ EA + P+A K IT KW+N++ EEK+P+
Sbjct: 191 KRPTTAYLYFVSKYRETLKEAGEVVPKA--KIITQACAEKWRNMNEEEKEPF-------- 240
Query: 231 EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPK 290
L++ ++R + K LE KK +DP +PK
Sbjct: 241 ---LELSRRDRERWQKDKALE-----------------------------KKPRDPNRPK 268
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AYFLF ++ R + E+ K GE W ++++ +K PY A+ + K+ ++
Sbjct: 269 RPPSAYFLFLADFRKNYPGKSDPAKEITKKAGEAWNSLSDAEKTPYYRSAQLVRAKWEQD 328
Query: 351 MEAYKRRMK 359
+EAYK+ +K
Sbjct: 329 LEAYKQSVK 337
>gi|302755332|ref|XP_002961090.1| hypothetical protein SELMODRAFT_35436 [Selaginella moellendorffii]
gi|300172029|gb|EFJ38629.1| hypothetical protein SELMODRAFT_35436 [Selaginella moellendorffii]
Length = 295
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL-LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
KDP PK + Y F +E+RA L L E++K+ GE W +MTEEQK PY+E K
Sbjct: 218 KDPNAPKLNRSGYNYFFAEQRAKLKLVYPDKDREISKMIGETWSSMTEEQKSPYQERGVK 277
Query: 343 NKEKYNEEMEAYKRRMK 359
+KE+Y E+ Y+ RMK
Sbjct: 278 DKERYKREISDYRDRMK 294
>gi|302766998|ref|XP_002966919.1| hypothetical protein SELMODRAFT_35440 [Selaginella moellendorffii]
gi|300164910|gb|EFJ31518.1| hypothetical protein SELMODRAFT_35440 [Selaginella moellendorffii]
Length = 305
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL-LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
KDP PK + Y F +E+RA L L E++K+ GE W +MTEEQK PY+E K
Sbjct: 228 KDPNAPKLNRSGYNYFFAEQRAKLKLVYPDKDREISKMIGETWSSMTEEQKSPYQERGVK 287
Query: 343 NKEKYNEEMEAYKRRMK 359
+KE+Y E+ Y+ RMK
Sbjct: 288 DKERYKREISDYRDRMK 304
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 23 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 82
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 83 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 110
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 111 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 170
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 103 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 162
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 163 EKDIAAYR 170
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KKE+DP PK P+TA+FLF+ + R ++ N + +++++ G +W +M+E++K+PY +
Sbjct: 44 KKERDPNAPKKPLTAFFLFNQKYRQKVVERNPEIKLTQISQMAGNKWTSMSEQEKKPYLD 103
Query: 339 IAKKNKEKYNEEMEAY 354
KEKY++E++ Y
Sbjct: 104 QYNAAKEKYDQELKDY 119
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P + L+ + + + NPE + +I+ + G KW ++S +EKKPY ++Y A KE Y
Sbjct: 53 KKPLTAFFLFNQKYRQKVVERNPEIKLTQISQMAGNKWTSMSEQEKKPYLDQYNAAKEKY 112
Query: 234 LQ 235
Q
Sbjct: 113 DQ 114
>gi|6678303|ref|NP_033386.1| transcription factor A, mitochondrial precursor [Mus musculus]
gi|22654290|sp|P40630.2|TFAM_MOUSE RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
AltName: Full=Testis-specific high mobility group
protein; Short=TS-HMG; Flags: Precursor
gi|1575123|gb|AAC52815.1| mitochondrial transcription factor A [Mus musculus]
gi|12805061|gb|AAH01987.1| Transcription factor A, mitochondrial [Mus musculus]
gi|26341192|dbj|BAC34258.1| unnamed protein product [Mus musculus]
gi|52789285|gb|AAH83084.1| Transcription factor A, mitochondrial [Mus musculus]
gi|74146831|dbj|BAE41382.1| unnamed protein product [Mus musculus]
gi|74191237|dbj|BAE39447.1| unnamed protein product [Mus musculus]
gi|74198670|dbj|BAE39809.1| unnamed protein product [Mus musculus]
gi|148700009|gb|EDL31956.1| transcription factor A, mitochondrial, isoform CRA_d [Mus musculus]
Length = 243
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q + K ++P+A+ E+ + A W+ + EKK YE ++AE +AY
Sbjct: 50 KKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAEKKVYEADFKAEWKAY 109
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL--KPKH 291
+ ++K + +Q T +L+ + +Q K+ K+ + L KPK
Sbjct: 110 KEAVSKYK-------------EQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKR 156
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P +AY ++ SE A + + K+ E WKN++ E+K+ Y ++AK ++ +Y+ EM
Sbjct: 157 PRSAYNIYVSESFQE--AKDDSAQGKLKLVNEAWKNLSPEEKQAYIQLAKDDRIRYDNEM 214
Query: 352 EAYKRRMKEL 361
++++ +M E+
Sbjct: 215 KSWEEQMAEV 224
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P++ +FLFSSE R + + N + +VAK G+ W N+++ +K+PY A K
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGISIGDVAKKLGDMWNNLSDSEKQPYITKAAK 148
Query: 343 NKEKYNEEMEAYKRRMKE 360
KEKY +++ YK + K
Sbjct: 149 LKEKYEKDVANYKSKGKS 166
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPSAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LFSSE R + + N V +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 47/205 (22%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYIL---WCKDQWNEAKKENPEAEFKEITNILGAKWKNV 214
LK K+ K G KR + YI W +++ ++ ++ P + KW +
Sbjct: 166 LKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPR--IGDFGKECAGKWNTM 223
Query: 215 SAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEAD 274
S E+K+P+ L A++R E +K++ A+
Sbjct: 224 SDEDKQPF-----------LSAAARDR----------ERYKREMAVY------------- 249
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNMTEEQ 332
K +D KPK P TA+ LF + R + V +AK+ GE W++M+EE
Sbjct: 250 ------KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSMSEED 303
Query: 333 KRPYEEIAKKNKEKYNEEMEAYKRR 357
KRPY E + K KY + ME Y+R+
Sbjct: 304 KRPYVERQNEEKMKYEQNMEEYRRK 328
>gi|431904201|gb|ELK09623.1| Transcription factor A, mitochondrial [Pteropus alecto]
Length = 245
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ +AY
Sbjct: 51 KKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAELWRELPESEKKVYEDAYKADWQAY 110
Query: 234 LQVM--AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
+ + +E+ M LE+E QK + K++A + K+E L KPK
Sbjct: 111 KEEINRIQEQLTPSQMVSLEKEIMQK----------RLKKKAIIK----KRELTMLGKPK 156
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AY +F SER D + L++ K E WKN++ QK+ Y ++A+ +K +Y E
Sbjct: 157 RPRSAYNIFISERFQE-AKDGTSQLKL-KTVNESWKNLSSSQKQVYIQLAEDDKIRYYNE 214
Query: 351 MEAYKRRMKEL 361
+++++ +M E+
Sbjct: 215 IKSWEEQMVEV 225
>gi|401626897|gb|EJS44815.1| nhp6bp [Saccharomyces arboricola H-6]
Length = 99
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 268 QFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEW 325
+ KQ + + + +++KDP PK ++AY F++E R + ++N +V +V +I GE W
Sbjct: 6 ELKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANETRDIVRSENPDVTFGQVGRILGERW 65
Query: 326 KNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
K +T E+K PYE A+ +K++Y E E Y
Sbjct: 66 KALTAEEKVPYESKAQADKKRYESEKELY 94
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG +WK ++AEEK
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANETRDIVRSENPDVTFGQVGRILGERWKALTAEEKV 74
Query: 221 PYEEKYQAEKEAY 233
PYE K QA+K+ Y
Sbjct: 75 PYESKAQADKKRY 87
>gi|397522857|ref|XP_003831465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1 isoform 4
[Pan paniscus]
Length = 328
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 45/189 (23%)
Query: 174 KRPSPPYILWC---KDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK 230
KRP+ Y+ + ++ EA + P+A K IT KW+N++ EEK+P+
Sbjct: 54 KRPTTAYLYFVSKYRETLKEAGEVVPKA--KIITQACAEKWRNMNEEEKEPF-------- 103
Query: 231 EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPK 290
L++ ++R + K LE KK +DP +PK
Sbjct: 104 ---LELSRRDRERWQKDKALE-----------------------------KKPRDPNRPK 131
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AYFLF ++ R + E+ K GE W ++++ +K PY A+ + K+ ++
Sbjct: 132 RPPSAYFLFLADFRKNYPGKSDPAKEITKKAGEAWNSLSDAEKTPYYRSAQLVRAKWEQD 191
Query: 351 MEAYKRRMK 359
+EAYK+ +K
Sbjct: 192 LEAYKQSVK 200
>gi|351725757|ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycine max]
gi|255628371|gb|ACU14530.1| unknown [Glycine max]
Length = 139
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F SE R +NK+V V K GE+WK++++ +K P+
Sbjct: 29 KAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEKAPFV 88
Query: 338 EIAKKNKEKYNEEMEAYKRRM 358
A+K K++Y + + AY +++
Sbjct: 89 ATAEKKKQEYEKTISAYNKQL 109
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 47/205 (22%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYIL---WCKDQWNEAKKENPEAEFKEITNILGAKWKNV 214
LK K+ K G KR + YI W +++ ++ ++ P + KW +
Sbjct: 202 LKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPR--IGDFGKECAGKWNTM 259
Query: 215 SAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEAD 274
S E+K+P+ L A++R E +K++ A+
Sbjct: 260 SDEDKQPF-----------LSAAARDR----------ERYKREMAVY------------- 285
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNMTEEQ 332
K +D KPK P TA+ LF + R + V +AK+ GE W++M+EE
Sbjct: 286 ------KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSMSEED 339
Query: 333 KRPYEEIAKKNKEKYNEEMEAYKRR 357
KRPY E + K KY + ME Y+R+
Sbjct: 340 KRPYVERQNEEKMKYEQNMEEYRRK 364
>gi|397640872|gb|EJK74364.1| hypothetical protein THAOC_03961 [Thalassiosira oceanica]
Length = 1104
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 33/185 (17%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
R + L+ N K ENP+A+F +I ++ ++K +S E+ +++ +KE Y
Sbjct: 944 RNQSAFFLYSNANRNRVKAENPDAKFGDIAKLISVEFKALSEHERAKWDKLAAEDKERY- 1002
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKK--EKDPLKPKHP 292
+RE E ++ +D E+ PK+ +KDP PK
Sbjct: 1003 ------QREME----------------------DYEPPSDLEDDAPKRKAKKDPNAPKRN 1034
Query: 293 VTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+A+FL+S+ R + N ++AKI +K + E++ ++ A ++K +Y ++
Sbjct: 1035 QSAFFLYSNATRNDVKEANPEAKFGDIAKIISTHFKALPVEERAYWDNKAAEDKARYQQQ 1094
Query: 351 MEAYK 355
++ YK
Sbjct: 1095 LQMYK 1099
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 141 QKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEF 200
++M++++P L D + + KK KR + L+ N+ K+ NPEA+F
Sbjct: 1004 REMEDYEPPSDLE-----DDAPKRKAKKDPNAPKRNQSAFFLYSNATRNDVKEANPEAKF 1058
Query: 201 KEITNILG-----------AKWKNVSAEEKKPYEEKYQAEKE 231
+I I+ A W N +AE+K Y+++ Q KE
Sbjct: 1059 GDIAKIISTHFKALPVEERAYWDNKAAEDKARYQQQLQMYKE 1100
>gi|389633953|ref|XP_003714629.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|351646962|gb|EHA54822.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|440474541|gb|ELQ43278.1| hypothetical protein OOU_Y34scaffold00162g47 [Magnaporthe oryzae
Y34]
gi|440479757|gb|ELQ60505.1| hypothetical protein OOW_P131scaffold01287g37 [Magnaporthe oryzae
P131]
Length = 537
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L N E+AK+ GE W+ +T +K
Sbjct: 111 KYRRHPKADEN--APERPPSAYVLFSNKTRDDLKDRNLTFTEIAKLVGENWQALTPAEKE 168
Query: 335 PYEEIAKKNKEKYNEEMEAYKRRMK 359
PYE A+ KEKYN ++ YK+ K
Sbjct: 169 PYETQAQTAKEKYNADLAEYKQTTK 193
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
RP Y+L+ ++ K N F EI ++G W+ ++ EK+PYE + Q KE Y
Sbjct: 125 RPPSAYVLFSNKTRDDLKDRN--LTFTEIAKLVGENWQALTPAEKEPYETQAQTAKEKY 181
>gi|147907314|ref|NP_001081106.1| transcription factor A, mitochondrial [Xenopus laevis]
gi|1016758|gb|AAA91456.1| transcription factor A [Xenopus laevis]
Length = 309
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+ + +Q + K+ PEA+ ++T I+ +WK +++ EK+PYE +A+ + Y
Sbjct: 82 KRPLSGYLRYSVEQRPKLHKQYPEAKMMDLTKIIALEWKGLASTEKEPYEAVAKADLKKY 141
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ + + R ++L E H+++ L A +++ + K+E L +PK P
Sbjct: 142 REEVKQYREALSPVQL--ELHREQRRQRL----------AKRKSVRKKRELTALGRPKRP 189
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITG--EEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+ + +F SE D K K+ +EW+ + QK+ Y +A+ +K +Y E
Sbjct: 190 RSPFNIFMSEH----FQDAKGTSSQTKMKSLRDEWERLHNTQKQTYNHLAQDDKIRYENE 245
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 246 MKSWEEQMIEI 256
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P++ Y +S E+R L ++++ KI EWK + +K PYE +AK + +K
Sbjct: 81 PKRPLSGYLRYSVEQRPKLHKQYPEAKMMDLTKIIALEWKGLASTEKEPYEAVAKADLKK 140
Query: 347 YNEEMEAYK 355
Y EE++ Y+
Sbjct: 141 YREEVKQYR 149
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R +NK+V V K G+ WK ++E +K PY+ A+
Sbjct: 32 DPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAE 91
Query: 342 KNKEKYNEEMEAYKRR 357
K K +Y + M+AY R+
Sbjct: 92 KRKAEYQKNMDAYNRK 107
>gi|297665615|ref|XP_002811141.1| PREDICTED: high mobility group protein B4 [Pongo abelii]
Length = 189
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
N F+E + KW+++S EK YE L + K R + E M + +
Sbjct: 33 NTYVGFEEFSRKCSEKWRSISKHEKAKYEA---------LAKLDKARYQEEMMNYVGKT- 82
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN- 313
K ++++DP P+ P +++ LF + A L +N N
Sbjct: 83 ------------------------KKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNW 118
Query: 314 -VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKEL 361
V++VAK TG+ W T+ +K PYE+ A + KY EE+E Y+++ K+
Sbjct: 119 SVVQVAKATGKMWSAATDLEKHPYEQRAALLRAKYFEELELYRKQRKQC 167
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSAATDLEKHPYEQRAALLRAKY 153
Query: 234 ---LQVMAKERRESEAMK 248
L++ K+R++ A K
Sbjct: 154 FEELELYRKQRKQCNARK 171
>gi|403215177|emb|CCK69677.1| hypothetical protein KNAG_0C05790 [Kazachstania naganishii CBS
8797]
Length = 210
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+L+CK+ KKENP+ + E+T + G KW +S + +KP+ E+Y+ +
Sbjct: 68 KRPMTAYLLYCKEIRPGMKKENPDLKTTELTKLFGEKWSELSEQARKPFVEQYEKD---- 123
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
E K+K A E L PK P
Sbjct: 124 ----------------FAEYQKEKAAFE-----------------------KTLPPKKPA 144
Query: 294 TAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
+FLF+ + R++++ + + E++ + ++W +M E +K Y ++ KK
Sbjct: 145 APFFLFTKDVRSSVVDAHPDATFGEISTLVSQKWNSMEESKKEEYHDLYKK 195
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 284 KDPLK--PKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEI 339
KD LK PK P+TAY L+ E R + +N ++ E+ K+ GE+W ++E+ ++P+ E
Sbjct: 60 KDVLKQAPKRPMTAYLLYCKEIRPGMKKENPDLKTTELTKLFGEKWSELSEQARKPFVEQ 119
Query: 340 AKKNKEKYNEEMEAYKRRM 358
+K+ +Y +E A+++ +
Sbjct: 120 YEKDFAEYQKEKAAFEKTL 138
>gi|388497528|gb|AFK36830.1| unknown [Medicago truncatula]
Length = 155
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 273 ADKENKKPKKEK---DPLKPKHPVTAYFLFSSERRAALL---ADNKNVLEVAKITGEEWK 326
A K +KP K K DP KPK P +A+F+F + R DNK V V K G +WK
Sbjct: 26 ATKGGRKPAKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWK 85
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+++E +K PY A+K K +Y + M+AY ++ E
Sbjct: 86 SLSEAEKAPYAAKAEKRKAEYEKTMKAYNKKQAE 119
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAE-FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
KRP + ++ +D + KK+NP+ + + GAKWK++S EK PY K + K
Sbjct: 46 KRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKAEKRKAE 105
Query: 233 YLQVM 237
Y + M
Sbjct: 106 YEKTM 110
>gi|118343822|ref|NP_001071733.1| transcription factor protein [Ciona intestinalis]
gi|70569841|dbj|BAE06487.1| transcription factor protein [Ciona intestinalis]
Length = 204
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 33/178 (18%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
++ C+++ ++ K N + F E + +WK ++ +EKK + + AEK+ +
Sbjct: 20 FVQTCREE-HKRKHPNEQVVFAEFSRKCAKRWKPMTDKEKKTFTD--MAEKD-------R 69
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
+R E E ++ Y+ EA K+ KK+KDP PK P +A+FLF
Sbjct: 70 QRYERE-----------------MKDYVPAAGEAKKK----KKKKDPNAPKRPQSAFFLF 108
Query: 300 SSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
++RRA L A+N V E+AK G++W + + K+ Y E + K KYN+EME Y+
Sbjct: 109 CADRRAPLKAENPGWTVGEIAKALGKKWAAASPDTKKKYAEQGEVEKSKYNKEMEKYR 166
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C D+ K ENP EI LG KW S + KK Y E+ + EK Y
Sbjct: 99 KRPQSAFFLFCADRRAPLKAENPGWTVGEIAKALGKKWAAASPDTKKKYAEQGEVEKSKY 158
Query: 234 LQVMAKERRESEA 246
+ M K R + EA
Sbjct: 159 NKEMEKYRSQQEA 171
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y L+ + E KK++PE F E + WK +SA+EK +EE L
Sbjct: 31 YALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKTMSAKEKSKFEE---------LSKE 81
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ESE ++ Y+ K KK KK+KDP PK P + +F
Sbjct: 82 DKKRYESE-----------------MKDYV-----PPKGAKKQKKKKDPNAPKRPPSGFF 119
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+FS+ R + ++ ++AK GE+W M E+K PYE+ A K KEKY +++ AY+
Sbjct: 120 IFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYR 179
Query: 356 RRMK 359
+ K
Sbjct: 180 AKTK 183
>gi|169793991|gb|ACA81392.1| Smarce1 variant 4 [Homo sapiens]
Length = 328
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 37 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 96
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 97 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 151
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 152 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 189
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPY 336
K + +KDPL PK ++AY F++E+R + +N V +V KI GE WK ++++Q+ PY
Sbjct: 14 KRRGKKDPLAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPY 73
Query: 337 EEIAKKNKEKYNEEMEAY 354
+ A +K++Y +E AY
Sbjct: 74 DAKAAADKKRYEDEKAAY 91
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ ILG +WK +S +++ PY+ K A+K+ Y
Sbjct: 25 KRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYDAKAAADKKRY 84
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 36/172 (20%)
Query: 192 KKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKL 249
KK++P+A F E + +WK +SA+EK +E+ +A+K Y ER
Sbjct: 28 KKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY------ERE------- 74
Query: 250 LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
++ Y+ K E KK KDP PK P +A+FLF SE R +
Sbjct: 75 -------------MKTYIPPKGETK------KKFKDPNAPKRPPSAFFLFCSEYRPKIKG 115
Query: 310 DNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+ + K
Sbjct: 116 EHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 167
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 31 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRY---- 86
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P +A+F
Sbjct: 87 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSAFF 116
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 117 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYK 176
Query: 356 RRMK 359
+ K
Sbjct: 177 SKGK 180
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 109 KRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 168
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKN 327
K +A+ + K+ + +KDP PK ++AY F++E+R + +N V +V KI GE WK
Sbjct: 7 KSKAEPKVKRGRGKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKA 66
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAY 354
++++Q+ PYE A +K++Y +E +AY
Sbjct: 67 LSDKQRAPYEAKAAADKKRYEDEKQAY 93
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 157 CLKDKEQDRKKKGCAERKRPSPP------YILWCKDQWNEAKKENPEAEFKEITNILGAK 210
+K K + + K+G +K P+ P Y+ + +Q ++ENP F ++ ILG +
Sbjct: 5 AVKSKAEPKVKRGRG-KKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGER 63
Query: 211 WKNVSAEEKKPYEEKYQAEKEAY 233
WK +S +++ PYE K A+K+ Y
Sbjct: 64 WKALSDKQRAPYEAKAAADKKRY 86
>gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 276 ENKKPKKE-KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEE 331
E KK KK KDP KPK P +A+F+F + R +NK+V V K G++WK +T+
Sbjct: 22 ETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDA 81
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKRR 357
+K P+ A+K K++Y + M+AY R+
Sbjct: 82 EKAPFIAKAEKRKQEYEKSMQAYNRK 107
>gi|193880|gb|AAA02579.1| HMG box protein [Mus musculus]
gi|148700008|gb|EDL31955.1| transcription factor A, mitochondrial, isoform CRA_c [Mus musculus]
Length = 199
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 102/190 (53%), Gaps = 17/190 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q + K ++P+A+ E+ + A W+ + EKK YE ++AE +AY
Sbjct: 6 KKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAEKKVYEADFKAEWKAY 65
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL--KPKH 291
+ ++K + +Q T +L+ + +Q K+ K+ + L KPK
Sbjct: 66 KEAVSKYK-------------EQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKR 112
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P +AY ++ SE + A + + K+ E WKN++ E+K+ Y ++AK ++ +Y+ EM
Sbjct: 113 PRSAYNIYVSE--SFQEAKDDSAQGKLKLVNEAWKNLSPEEKQAYIQLAKDDRIRYDNEM 170
Query: 352 EAYKRRMKEL 361
++++ +M E+
Sbjct: 171 KSWEEQMAEV 180
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +EE + +K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEEMAKGDKVRYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E+ KK KDP PK P +A+F
Sbjct: 76 --------------------------KNYIPPKGESK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+P+E+ A K KEKY +++ AY+
Sbjct: 104 LFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAGDDKQPFEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 40/184 (21%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C+++ N K+NP F E + +WK +S +EK +E+ + +K Y Q M
Sbjct: 19 FVKTCREEHN---KKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFEDLAKQDKARYDQEM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ K K++KDP P+ P + +F
Sbjct: 76 ---------------------------------MHYNPGKKGRKQKKDPNAPRRPPSGFF 102
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF +E+R + A N + +VAK G W N+++ +K+P+ A K K+KY ++M YK
Sbjct: 103 LFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQPFLSNADKLKDKYQKDMAFYK 162
Query: 356 RRMK 359
++ K
Sbjct: 163 KKKK 166
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEEIA 340
DP KPK ++AY F R N V E +K E WK M+ ++K +E++A
Sbjct: 5 DPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFEDLA 64
Query: 341 KKNKEKYNEEMEAY 354
K++K +Y++EM Y
Sbjct: 65 KQDKARYDQEMMHY 78
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP + L+C +Q K +NP ++ LG W N+S EK+P+ K+ Y
Sbjct: 95 RRPPSGFFLFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQPFLSNADKLKDKY 154
Query: 234 LQVMA 238
+ MA
Sbjct: 155 QKDMA 159
>gi|295913696|gb|ADG58089.1| transcription factor [Lycoris longituba]
Length = 183
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 63 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 122
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K YN+ M AY +++ +
Sbjct: 123 KRKVDYNKTMVAYNKKLAD 141
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 153
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 153
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 153
>gi|388497036|gb|AFK36584.1| unknown [Medicago truncatula]
Length = 155
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 273 ADKENKKPKKEK---DPLKPKHPVTAYFLFSSERRAALL---ADNKNVLEVAKITGEEWK 326
A K +KP K K DP KPK P +A+F+F + R DNK V V K G +WK
Sbjct: 26 ATKGGRKPAKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWK 85
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+++E +K PY A+K K +Y + M+AY ++ E
Sbjct: 86 SLSEAEKAPYAAKAEKRKAEYEKTMKAYNKKQAE 119
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAE-FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
KRP + ++ +D + KK+NP+ + + GAKWK++S EK PY K + K
Sbjct: 46 KRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKAEKRKAE 105
Query: 233 YLQVM 237
Y + M
Sbjct: 106 YEKTM 110
>gi|295913393|gb|ADG57949.1| transcription factor [Lycoris longituba]
Length = 162
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 42 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 101
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K YN+ M AY +++ +
Sbjct: 102 KRKVDYNKTMVAYNKKLAD 120
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +W+ +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ R + + + +VAK GE+W N+T E K PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRPQVKVETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 NKGK 166
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRPS + ++C D + K E P ++ LG KW N++AE+K PY
Sbjct: 95 KRPSSAFFIFCADFRPQVKVETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ + +
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED---------MAIA 66
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K+E K K KDP PK P +A+F
Sbjct: 67 DKARYERE-----------------MKTYIPPKRETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF S R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSGYRPKIKGEHPGLSIGDVAKKRGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 37/175 (21%)
Query: 190 EAKKENPEAE---FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEA 246
E K++P+A F E + +WK +SA+EK +E+ +A+K Y RE
Sbjct: 25 EEHKKHPDASVNNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAPY-------ERE--- 74
Query: 247 MKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA 306
++ Y+ K E K K KDP PK P +A+FLF SE R
Sbjct: 75 ----------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFFLFCSEYRPK 112
Query: 307 LLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+ + ++ +VAK GE W N + K+PYE+ A K KEKY++++ AY+ + K
Sbjct: 113 IKGEPPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYDKDIAAYRAKGK 167
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEPPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 DKDIAAYR 163
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTKSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|1575501|gb|AAC52816.1| mitochondrial transcription factor A [Mus musculus]
gi|148700006|gb|EDL31953.1| transcription factor A, mitochondrial, isoform CRA_a [Mus musculus]
Length = 215
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q + K ++P+A+ E+ + A W+ + EKK YE ++AE +AY
Sbjct: 22 KKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAEKKVYEADFKAEWKAY 81
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL--KPKH 291
+ ++K + +Q T +L+ + +Q K+ K+ + L KPK
Sbjct: 82 KEAVSKYK-------------EQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKR 128
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P +AY ++ SE A + + K+ E WKN++ E+K+ Y ++AK ++ +Y+ EM
Sbjct: 129 PRSAYNIYVSESFQE--AKDDSAQGKLKLVNEAWKNLSPEEKQAYIQLAKDDRIRYDNEM 186
Query: 352 EAYKRRMKEL 361
++++ +M E+
Sbjct: 187 KSWEEQMAEV 196
>gi|13786148|ref|NP_112616.1| transcription factor A, mitochondrial precursor [Rattus norvegicus]
gi|4877353|dbj|BAA77755.1| mitochondrial transcription factor A (r-mtTFA) [Rattus norvegicus]
Length = 244
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 105/191 (54%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q + K ++P+A+ E+ + A W+ + EKK YE ++AE + Y
Sbjct: 50 KKPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVY 109
Query: 234 LQVMAKERRESEAMKL--LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
+ ++K + + +L LE+E +QK L++ Q K ++E L KPK
Sbjct: 110 KEAVSKYKEQLTPSQLMGLEKEARQKR----LKKKAQIK----------RRELILLGKPK 155
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AY ++ SE A +++ K+ + WKN++ ++K+ Y ++AK ++ +Y+ E
Sbjct: 156 RPRSAYNIYVSESFQG--AKDESPQGKLKLVNQAWKNLSHDEKQAYIQLAKDDRIRYDNE 213
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 214 MKSWEEQMAEV 224
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 153
>gi|403293162|ref|XP_003937591.1| PREDICTED: high mobility group protein B4 [Saimiri boliviensis
boliviensis]
Length = 254
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 38/186 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 79 YIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 129
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + K ++++DP P+ P +++
Sbjct: 130 DKARYQEEMMNYVGKRKK-------------------------RRKRDPQAPRRPPSSFL 164
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N N V++VAK TG+ W T+ +K+PYE+ A + KY EE+E Y+
Sbjct: 165 LFCQDHYAQLKRENPNWSVVQVAKATGKMWSATTDLEKQPYEQRAALLRAKYFEELELYR 224
Query: 356 RRMKEL 361
++ K+
Sbjct: 225 KQRKQC 230
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK+PYE++ + Y
Sbjct: 157 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSATTDLEKQPYEQRAALLRAKY 216
Query: 234 ---LQVMAKERRES 244
L++ K+R++
Sbjct: 217 FEELELYRKQRKQC 230
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 35/180 (19%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NP F E + +W+ +S++EK +EE + +K Y + M
Sbjct: 15 YAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEMAKTDKVRYDREM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K KK+KDP PK P +A+F
Sbjct: 75 --------------------------KNYV-----PPKGAKGGKKKKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F S+ R + DN + ++AK GE W ++ ++K PYE+ A K KEKY +++ AY+
Sbjct: 104 VFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMKLKEKYEKDVAAYR 163
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D + K +NP +I LG W +S +EK PYE+K KE Y
Sbjct: 96 KRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDVAAYR 163
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KP+ ++Y F E + + N E +K E W+ M+ ++K +EE+
Sbjct: 3 KDPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEM 62
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM+ Y
Sbjct: 63 AKTDKVRYDREMKNY 77
>gi|17221614|dbj|BAB78468.1| mitochondrial transcription factor A [Gallus gallus]
Length = 264
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 32/206 (15%)
Query: 169 GC------AER-KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP 221
GC AER K+P Y + +D +++NPE E+ L W+ + A +K+
Sbjct: 36 GCCRAMSSAERPKQPLSAYFRFLRDNQPAFRQQNPELNSLELVKKLAGVWRELPASQKQV 95
Query: 222 YEEKYQAEKEAYLQVMAKERRE---SEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENK 278
YEE + + Y + +A + + ++A L EE K+ A + +
Sbjct: 96 YEEARKTDWRKYEEQLAAYKAQLTPAQAAALKEERRKRL---------------AKRRSF 140
Query: 279 KPKKEKDPL-KPKHPVTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRP 335
+ K+E L KPK P + + +F SE +K + AK+ E W+N++ QK+P
Sbjct: 141 RIKRELTVLGKPKRPRSGFNIFVSEN----FQQSKGLSPTAKLKQLFETWQNLSSSQKQP 196
Query: 336 YEEIAKKNKEKYNEEMEAYKRRMKEL 361
Y ++A+ +K +Y EM++++ +M EL
Sbjct: 197 YLQLAQDDKVRYQNEMKSWEAKMVEL 222
>gi|145540136|ref|XP_001455758.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423566|emb|CAK88361.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 261 ELLEQYLQFKQEADKENKKP--KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV---- 314
+ +Q+L+ + + N KP KKE+DP PK P+T +FLFS + R +L N +
Sbjct: 3 QYCQQFLKGQPIIEFNNDKPEKKKERDPNAPKRPLTPFFLFSQKYRDKVLERNPGIDQRD 62
Query: 315 -------LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+++++ G++W +M+EE+K+PY + + K KY+ +++ Y
Sbjct: 63 YSLEVKLTQISQMAGQKWNSMSEEEKQPYVDQYNEAKNKYDGDLKVY 109
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 153 PIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENP---------EAEFKEI 203
PI++ DK + +K++ KRP P+ L+ + ++ + NP E + +I
Sbjct: 13 PIIEFNNDKPEKKKERDPNAPKRPLTPFFLFSQKYRDKVLERNPGIDQRDYSLEVKLTQI 72
Query: 204 TNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+ + G KW ++S EEK+PY ++Y K Y
Sbjct: 73 SQMAGQKWNSMSEEEKQPYVDQYNEAKNKY 102
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 52 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 107
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 108 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 137
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 138 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 197
Query: 356 RRMK 359
+ K
Sbjct: 198 SKGK 201
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 130 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 189
>gi|327283512|ref|XP_003226485.1| PREDICTED: transcription factor A, mitochondrial-like [Anolis
carolinensis]
Length = 274
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 29/196 (14%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P YI + KDQ KK+NP+ +IT + W+ + A +KKPYE Q +++ Y
Sbjct: 43 KQPMSAYIRFYKDQQPIYKKQNPDVSILDITKKIAQVWRELPASDKKPYEAAAQTDRQIY 102
Query: 234 LQVMAKERRE---SEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPK 290
+ MA+ + E +E L EE+ ++ + + Q KPK
Sbjct: 103 KEQMARYKAELTPAEEAALKEEKRRKFKKRKATRKKRQLTVLG--------------KPK 148
Query: 291 HPVTAYFLFSSE-----RRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
P +A+ +F SE + ++ A KNV ++W+ + QK+ Y ++A+ +K
Sbjct: 149 RPRSAFNIFMSEHFQEAKGVSIQAKMKNVF-------DDWQKLHTSQKKTYLQLAEDDKI 201
Query: 346 KYNEEMEAYKRRMKEL 361
+Y EM++++ M E+
Sbjct: 202 RYENEMKSWEEHMVEI 217
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 288 KPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
+PK P++AY F +++ N +V L++ K + W+ + K+PYE A+ +++
Sbjct: 41 RPKQPMSAYIRFYKDQQPIYKKQNPDVSILDITKKIAQVWRELPASDKKPYEAAAQTDRQ 100
Query: 346 KYNEEMEAYK 355
Y E+M YK
Sbjct: 101 IYKEQMARYK 110
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 30/183 (16%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++PE + F+E + +WK +S EKK + E AEK+
Sbjct: 16 YAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHE--MAEKD------ 67
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ++E ++ Y K E KK K KD PK ++A+F
Sbjct: 68 -KKRYDTE-----------------MQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFF 109
Query: 298 LFSSERRA--ALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R +L V ++AK G++W + E K YE +A+K+K +Y EM AYK
Sbjct: 110 WFCNDERGKVKMLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYK 169
Query: 356 RRM 358
++M
Sbjct: 170 KKM 172
>gi|146092993|ref|XP_001466608.1| putative high mobility group protein homolog tdp-1 [Leishmania
infantum JPCM5]
gi|398018683|ref|XP_003862506.1| high mobility group protein homolog tdp-1, putative [Leishmania
donovani]
gi|134070971|emb|CAM69647.1| putative high mobility group protein homolog tdp-1 [Leishmania
infantum JPCM5]
gi|322500736|emb|CBZ35813.1| high mobility group protein homolog tdp-1, putative [Leishmania
donovani]
Length = 302
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMA 238
PYI++ + + K ++P+ + ++ + +G WK S EEK Y++ +K Y + MA
Sbjct: 122 PYIIFVNENREKLKAKHPDMKNTDLLSEMGNLWKKASEEEKSRYQKLADEDKLRYDREMA 181
Query: 239 KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFL 298
A+ FK+ K+ K+ KKEKDP PK +TAYF
Sbjct: 182 AYIARGGAV---------------------FKR-GGKKAKREKKEKDPQAPKRALTAYFF 219
Query: 299 FSSERRAALLADNKNVLEVAKIT--GEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
F+S+ R A + N+ +++ G W M+ E+K+PYEE+A K+K++Y E
Sbjct: 220 FASDYR----AKHANIPAKQQMSEAGAAWGKMSAEEKKPYEELAAKDKKRYEAECSG 272
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 279 KPKKEKDPLK-PKHPVTAYFLFSSERRAALLA---DNKNVLEVAKITGEEWKNMTEEQKR 334
+ KKEK P PK ++ Y +F +E R L A D KN ++++ G WK +EE+K
Sbjct: 105 RGKKEKKPDDYPKGALSPYIIFVNENREKLKAKHPDMKNTDLLSEM-GNLWKKASEEEKS 163
Query: 335 PYEEIAKKNKEKYNEEMEAYKRRMKELL 362
Y+++A ++K +Y+ EM AY R +
Sbjct: 164 RYQKLADEDKLRYDREMAAYIARGGAVF 191
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 47/184 (25%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCQEEHKKKHPDASVNFSECLKKCSERWKTMSAKEKVKFEDMAKADKSRYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKE-----KDPLKPKHP 292
K N PK E KDP PK P
Sbjct: 76 -------------------------------------KTNIPPKGETEKKFKDPNVPKRP 98
Query: 293 VTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
A+FLF SE + ++ + + +VAKI GE W N + K+PYE+ AK KEKY ++
Sbjct: 99 PLAFFLFCSEYHPKIKEEHPDLSIGDVAKILGEMWNNTAADDKQPYEKAAKL-KEKYEKD 157
Query: 351 MEAY 354
+ AY
Sbjct: 158 IAAY 161
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE------EKYQ 227
KRP + L+C + + K+E+P+ ++ ILG W N +A++K+PYE EKY+
Sbjct: 96 KRPPLAFFLFCSEYHPKIKEEHPDLSIGDVAKILGEMWNNTAADDKQPYEKAAKLKEKYE 155
Query: 228 AEKEAY 233
+ AY
Sbjct: 156 KDIAAY 161
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F+++ R + +N + EV KI GE WK ++E+Q+ PYE
Sbjct: 19 KKKKDPNAPKRGLSAYMFFANDMRDKVREENPGIKFGEVGKILGERWKALSEKQRAPYEA 78
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E AY
Sbjct: 79 KAANDKKRYEDEKAAY 94
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK-------Y 226
KR Y+ + D ++ ++ENP +F E+ ILG +WK +S +++ PYE K Y
Sbjct: 28 KRGLSAYMFFANDMRDKVREENPGIKFGEVGKILGERWKALSEKQRAPYEAKAANDKKRY 87
Query: 227 QAEKEAY 233
+ EK AY
Sbjct: 88 EDEKAAY 94
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K +DP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFEDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|361130747|gb|EHL02497.1| putative High mobility group protein 20A [Glarea lozoyensis 74030]
Length = 267
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
P+ P +AY +FS++ R L N + E+AK+ GE W+N+ +K PYE+ A KE+YN
Sbjct: 145 PERPPSAYVIFSNKMREELKGRNLSFTEIAKLVGENWQNLAPAEKEPYEQQAFSAKERYN 204
Query: 349 EEMEAYKRRMK 359
E+ YK+ K
Sbjct: 205 GELAEYKKTAK 215
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 170 CAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAE 229
C ER P Y+++ E K N F EI ++G W+N++ EK+PYE++ +
Sbjct: 144 CPER--PPSAYVIFSNKMREELKGRN--LSFTEIAKLVGENWQNLAPAEKEPYEQQAFSA 199
Query: 230 KEAY 233
KE Y
Sbjct: 200 KERY 203
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 38/174 (21%)
Query: 190 EAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK+NPE F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 1 EHKKKNPEIPVNFAEFSKKCSERWKIMSAKEKSKFEDLAKADKVRY-------------- 46
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+ E K ++ ++ +KDP PK P + +FLF SE R +
Sbjct: 47 ---DREKKDYGPVKGGKK-----------------KKDPNAPKRPPSGFFLFCSEFRPKI 86
Query: 308 LADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+ N + +VAK GE W N+ E +K+PY A K KEKY +++ YK + K
Sbjct: 87 KSTNPGISIGDVAKKLGEMWNNLNEGEKQPYNNKAAKLKEKYEKDVADYKSKGK 140
>gi|169793995|gb|ACA81394.1| Smarce1 variant 6 [Homo sapiens]
Length = 293
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEKY 153
>gi|197101131|ref|NP_001124767.1| transcription factor A, mitochondrial [Pongo abelii]
gi|55725824|emb|CAH89692.1| hypothetical protein [Pongo abelii]
Length = 284
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 104/189 (55%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 89 KKPISSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 148
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ +++ + + +++ E E+ +++L+ K A KKE L KPK P
Sbjct: 149 KEEISRFKEQLTPSQIMSLEK------EITDKHLKRKAMAK------KKELTLLGKPKRP 196
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY ++ +ER + D+ E K E WKN+++ +K Y + AK+++ +Y+ EM+
Sbjct: 197 RSAYNVYVAERFQEVQGDSPQ--EKLKTLKENWKNLSDSEKELYIQYAKEDETRYHNEMK 254
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 255 SWEEQMIEV 263
>gi|348678094|gb|EGZ17911.1| hypothetical protein PHYSODRAFT_300810 [Phytophthora sojae]
Length = 557
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+ + + +E ENP ++++ LG +WK +SA E+KP+ E Q +K
Sbjct: 17 YLHFSHARRDELAAENPSWSVQQVSAELGRQWKALSAAERKPWVELAQFDK--------- 67
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
+ E H + EQ E PK++K +P+ P TAY F
Sbjct: 68 -------ARFHTEAHHHVNQQQSDEQ---------PEQAPPKRKKQSNEPRQPDTAYICF 111
Query: 300 SSERRAALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+R ++A N + V+K G +W+ +++++++ +E++A K+K ++ EE+
Sbjct: 112 WKSQRPEVVAANPFLAAPLVSKEVGRQWRALSDDERQVWEDLAAKDKLRFQEEI 165
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
++KK E ++P YI + K Q E NP ++ +G +W+ +S +E++ +E+
Sbjct: 93 KRKKQSNEPRQPDTAYICFWKSQRPEVVAANPFLAAPLVSKEVGRQWRALSDDERQVWED 152
Query: 225 KYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEK 284
+K + + +A+ + A T ++L K P K
Sbjct: 153 LAAKDKLRFQEEIARMQPTLAA-----------TTPDMLSAL-----------KTPLK-- 188
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP PK TA+ LF S R + + N + E + WK +++ K + E+AK+++
Sbjct: 189 DPFAPKPAKTAFQLFMSHNRESFMLLNMTINEFRAEMSQLWKRLSDADKAEWHELAKEDQ 248
Query: 345 EKYNEEMEAYK 355
+Y+ EM AYK
Sbjct: 249 RRYDTEMNAYK 259
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 202 EITNILGAKWKNVSAEEKKPYE-------EKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
EI +G WK +S +E+ Y+ E+++AE EA++ AK+ E A L +
Sbjct: 318 EIMREIGVTWKALSDDERAVYQRKADEDVERFRAEMEAHI---AKKNEEEAANPLTKRRP 374
Query: 255 KQKTAMELLEQYLQFKQEAD-----KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
+++ + E+ ++ Q K P+K++ P+ P TAY L +R LL+
Sbjct: 375 RKRKEFDDEEELVEAVQGPVQPVQVKTPTVPRKKRKSGPPRRPKTAYNLMYMSKRTELLS 434
Query: 310 DNK-NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ + E + + G+ W+ M+E ++ PY+ +A ++K +Y E++ Y
Sbjct: 435 TYQMSHNECSALCGKLWRQMSEAEREPYKRMAAEDKHRYEAELQVY 480
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +S++EK +EE + +K Y + M
Sbjct: 57 FVQTCRE---EHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREM 113
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + +K K+KDP PK P +A+F
Sbjct: 114 --------------------------------KNYVPPKGEKKGKKKDPNAPKRPPSAFF 141
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + D+ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 142 LFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 201
Query: 356 RRMK 359
+ K
Sbjct: 202 AKSK 205
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K ++P + LG W SA++K+PYE+K KE Y
Sbjct: 134 KRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 193
Query: 234 LQVMAKERRESEA 246
+ +A R +S++
Sbjct: 194 EKDIAAYRAKSKS 206
>gi|22654148|sp|Q91ZW1.1|TFAM_RAT RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|15991475|gb|AAL12892.1|AF377866_1 transcription factor A precursor [Rattus norvegicus]
gi|20177381|emb|CAC84763.1| mitochondrial transcription factor A [Rattus norvegicus]
gi|38304015|gb|AAH62022.1| Transcription factor A, mitochondrial [Rattus norvegicus]
gi|149043806|gb|EDL97257.1| transcription factor A, mitochondrial, isoform CRA_a [Rattus
norvegicus]
Length = 244
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 105/191 (54%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q + K ++P+A+ E+ + A W+ + EKK YE ++AE + Y
Sbjct: 50 KKPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVY 109
Query: 234 LQVMAKERRESEAMKL--LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
+ ++K + + +L LE+E +QK L++ Q K ++E L KPK
Sbjct: 110 KEAVSKYKEQLTPSQLMGLEKEARQKR----LKKKAQIK----------RRELILLGKPK 155
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AY ++ SE A +++ K+ + WKN++ ++K+ Y ++AK ++ +Y+ E
Sbjct: 156 RPRSAYNIYVSESFQE--AKDESAQGKLKLVNQAWKNLSHDEKQAYIQLAKDDRIRYDNE 213
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 214 MKSWEEQMAEV 224
>gi|50304233|ref|XP_452066.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636989|sp|Q6CVH3.1|NHP6_KLULA RecName: Full=Non-histone chromosomal protein 6
gi|49641198|emb|CAH02459.1| KLLA0B12056p [Kluyveromyces lactis]
Length = 93
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F++E R + A+N + +V +I GE+WK + E++K PYE
Sbjct: 10 RKKKDPNAPKRALSAYMFFANENRDIVRAENPGITFGQVGRILGEKWKALNEDEKAPYEA 69
Query: 339 IAKKNKEKYNEEMEAY 354
A+ +K++Y E E Y
Sbjct: 70 KAEADKKRYESEKELY 85
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K+ RKKK KR Y+ + + + + ENP F ++ ILG KWK ++ +EK
Sbjct: 6 KKTQRKKKDPNAPKRALSAYMFFANENRDIVRAENPGITFGQVGRILGEKWKALNEDEKA 65
Query: 221 PYEEK-------YQAEKEAYLQVMAK 239
PYE K Y++EKE Y+ A+
Sbjct: 66 PYEAKAEADKKRYESEKELYIATKAQ 91
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P +A+F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSAFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 153
>gi|312281849|dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
Length = 185
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK +A+F+F + R +N NV V K G++WK+M++ +K PYEE A
Sbjct: 48 KDPNKPKRAPSAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKA 107
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
K K +Y + M+AY + M+E
Sbjct: 108 AKRKAEYEKLMDAYNKNMEE 127
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
P+ P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEK
Sbjct: 94 PRRPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEK 153
Query: 347 YNEEMEAYKRRMK 359
Y +E+ AY+ R K
Sbjct: 154 YEKEVAAYRARCK 166
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 95 RRPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 EKEVAAYR 162
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PE F E + +WK +SA+EK +EE L
Sbjct: 34 FVQTCRE---EHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEE---------LSKE 81
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ESE ++ Y+ K KK KK+KDP PK P + +F
Sbjct: 82 DKKRYESE-----------------MKDYV-----PPKGAKKQKKKKDPNAPKRPPSGFF 119
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+FS+ R + ++ ++AK GE+W M E+K PYE+ A K KEKY +++ AY+
Sbjct: 120 IFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYR 179
Query: 356 RRMK 359
+ K
Sbjct: 180 AKTK 183
>gi|9963946|gb|AAG09777.1|AF246196_1 transcription factor A [Rattus norvegicus]
Length = 204
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 105/191 (54%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q + K ++P+A+ E+ + A W+ + EKK YE ++AE + Y
Sbjct: 10 KKPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVY 69
Query: 234 LQVMAKERRESEAMKL--LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
+ ++K + + +L LE+E +QK L++ Q K ++E L KPK
Sbjct: 70 KEAVSKYKEQLTPSQLMGLEKEARQKR----LKKKAQIK----------RRELILLGKPK 115
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AY ++ SE A +++ K+ + WKN++ ++K+ Y ++AK ++ +Y+ E
Sbjct: 116 RPRSAYNIYVSESFQG--AKDESPQGKLKLVNQAWKNLSHDEKQAYIQLAKDDRIRYDNE 173
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 174 MKSWEEQMAEV 184
>gi|355333144|pdb|3TQ6|A Chain A, Crystal Structure Of Human Mitochondrial Transcription
Factor A, Tfam Or Mttfa, Bound To The Light Strand
Promoter Lsp
gi|355333145|pdb|3TQ6|B Chain B, Crystal Structure Of Human Mitochondrial Transcription
Factor A, Tfam Or Mttfa, Bound To The Light Strand
Promoter Lsp
Length = 214
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 11 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 70
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ +++ + + +++ E E+++++L+ K KKE L KPK P
Sbjct: 71 KEEISRFKEQLTPSQIMSLEK------EIMDKHLKRKAMTK------KKELTLLGKPKRP 118
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY ++ +ER D+ E K E WKN+++ +K Y + AK+++ +Y+ EM+
Sbjct: 119 RSAYNVYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 176
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 177 SWEEQMIEV 185
>gi|357484151|ref|XP_003612362.1| HMG1/2-like protein [Medicago truncatula]
gi|355513697|gb|AES95320.1| HMG1/2-like protein [Medicago truncatula]
Length = 140
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWK 326
++ A K+ KK KDP KPK P +A+F+F SE R NK+V V K G+EWK
Sbjct: 17 RKGAGTGTKQSKKAKDPNKPKRPPSAFFVFMSEFRERFKKENPSNKSVAVVGKAGGKEWK 76
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+++ K P+ A K KE+Y + M AY + E
Sbjct: 77 ALSDADKAPFIAKADKLKEEYEKTMRAYNMGITE 110
>gi|213623420|gb|AAI69721.1| Unknown (protein for MGC:196448) [Xenopus laevis]
Length = 283
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+ + +Q + K+ PEA+ ++T I+ +WK +++ EK+PYE +A+ + Y
Sbjct: 56 KRPLSGYLRYSVEQRPKLHKQYPEAKMMDLTKIIALEWKGLASTEKEPYEAVAKADLKKY 115
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ + + R ++L E H+++ L A +++ + K+E L +PK P
Sbjct: 116 REEVKQYREALSPVQL--ELHREQRRQRL----------AKRKSVRKKRELTALGRPKRP 163
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITG--EEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+ + +F SE D K K+ +EW+ + QK+ Y +A+ +K +Y E
Sbjct: 164 RSPFNIFMSEH----FQDAKGTSSQTKMKSLRDEWERLHNTQKQTYNHLAQDDKIRYENE 219
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 220 MKSWEEQMIEI 230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P++ Y +S E+R L ++++ KI EWK + +K PYE +AK + +K
Sbjct: 55 PKRPLSGYLRYSVEQRPKLHKQYPEAKMMDLTKIIALEWKGLASTEKEPYEAVAKADLKK 114
Query: 347 YNEEMEAYK 355
Y EE++ Y+
Sbjct: 115 YREEVKQYR 123
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 36 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRY---- 91
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 92 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 121
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 122 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYK 181
Query: 356 RRMK 359
+ K
Sbjct: 182 SKGK 185
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 114 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKY 173
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R+KK KRP ++L+C + + KENP+ +F E+ + WKN+S++EKKP+EE
Sbjct: 544 RQKKDPNAPKRPKSAWLLFCDAKREDIVKENPDIKFTEVNGKISEIWKNLSSDEKKPFEE 603
Query: 225 KYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEK 284
+ Y + AK +E+ + + + K E +KE K K +K
Sbjct: 604 EAAKLASKYKEDKAKYDKENPSSSGGAGKKR--------------KGEDEKEGKAKKAKK 649
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK AY L+S E R + N ++ V + GE+WK + E+K+ +EE A++
Sbjct: 650 DPNAPKRGQNAYMLWSQEAREKMRKANPDLPMKAVMQQLGEKWKEIDAEEKKEWEEKARE 709
Query: 343 NKEKYNEEMEAYKRRMKEL 361
+KE++ E E YK++ L
Sbjct: 710 DKERFKRETEEYKKKGPSL 728
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK VS +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 57 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRY---- 112
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 113 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 142
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 143 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKLKEKYEKDVADYK 202
Query: 356 RRMK 359
+ K
Sbjct: 203 SKGK 206
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 135 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKLKEKY 194
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 18 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 73
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 74 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 103
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 104 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYK 163
Query: 356 RRMK 359
+ K
Sbjct: 164 SKGK 167
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 96 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 155
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +A+F+F S+ RA + +N + ++AK GE W T + K+PYE A K
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENPGISIGDIAKKLGELWSKQTPKDKQPYEAKAGK 151
Query: 343 NKEKYNEEMEAYK 355
KEKY +++ AY+
Sbjct: 152 LKEKYEKDVAAYR 164
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KP+ ++Y F E + + N E +K E WK M+ ++K +E++
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM+ Y
Sbjct: 64 AKGDKVRYDREMKGY 78
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D K ENP +I LG W + ++K+PYE K KE Y
Sbjct: 97 KRPPSAFFVFCSDHRARIKGENPGISIGDIAKKLGELWSKQTPKDKQPYEAKAGKLKEKY 156
Query: 234 LQVMAKERRESEA 246
+ +A R +S A
Sbjct: 157 EKDVAAYRAKSGA 169
>gi|384483554|gb|EIE75734.1| hypothetical protein RO3G_00438 [Rhizopus delemar RA 99-880]
Length = 335
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 34/188 (18%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+L+ +D + + NP+ EI+ +G W+N++ ++++ Y + KE L+
Sbjct: 158 YLLFNRDMRRKLLESNPKMTVAEISKEIGDSWRNLADDQREHYTNQASIIKEERLK---- 213
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDP-----------LK 288
K + H QK+ KQE K NKK +KDP
Sbjct: 214 --------KYPDYTHTQKSTP---------KQEQSKNNKKRNGQKDPRGRKKKRNKHPFG 256
Query: 289 PKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PKHP++AY + ++ + + V ++K W M+ EQ++P+ E A+ +K +
Sbjct: 257 PKHPMSAYLHYLADVYPKVSQNFPGSTVGPISKSISATWHAMSPEQRQPWTEKAELDKAR 316
Query: 347 YNEEMEAY 354
Y EM+ Y
Sbjct: 317 YAREMQIY 324
>gi|29841393|gb|AAP06425.1| SJCHGC00614 protein [Schistosoma japonicum]
gi|66275794|gb|AAY44044.1| high mobility group B1 [Schistosoma japonicum]
gi|226472340|emb|CAX77206.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472342|emb|CAX77207.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472344|emb|CAX77208.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472346|emb|CAX77209.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472348|emb|CAX77210.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472350|emb|CAX77211.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472352|emb|CAX77212.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472354|emb|CAX77213.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472356|emb|CAX77214.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472358|emb|CAX77215.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472360|emb|CAX77216.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472362|emb|CAX77217.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472364|emb|CAX77218.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472366|emb|CAX77219.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472368|emb|CAX77220.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472370|emb|CAX77221.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 176
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y L+ + + KK++P A +FK + +WKN+SA+EKK +++ + +KE Y M
Sbjct: 15 YALFLQSMRADHKKKHPNATLDFKSFSKECSEQWKNLSAKEKKKFKDLAEKDKERYRCEM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
EH ++ AD E + K+++DP PK ++A+F
Sbjct: 75 ---------------EH--------------YEPPAD-EGRSKKRKRDPDAPKKGLSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF ++ R + ++N + V EVAK G W++ + K YE +A+ KE+Y + ME YK
Sbjct: 105 LFCNDERPKVKSENPDWKVSEVAKELGRRWEHCKNKAK--YESLAQVEKERYEKAMEKYK 162
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 288 KPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEEIAKKN 343
KPK + AY LF RA + N +K E+WKN++ ++K+ ++++A+K+
Sbjct: 7 KPKGRMNAYALFLQSMRADHKKKHPNATLDFKSFSKECSEQWKNLSAKEKKKFKDLAEKD 66
Query: 344 KEKYNEEMEAY 354
KE+Y EME Y
Sbjct: 67 KERYRCEMEHY 77
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 153
>gi|403217000|emb|CCK71495.1| hypothetical protein KNAG_0H00800 [Kazachstania naganishii CBS
8797]
Length = 118
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F++E R + ++N N ++ K+ GE+WKNM+ E K PY+
Sbjct: 37 RKKKDPNAPKRSMSAYMFFANENRDIVKSENPNATFGQLGKLLGEKWKNMSTEDKEPYDA 96
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y E E Y
Sbjct: 97 KAAADKKRYESEKELY 112
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K RKKK KR Y+ + + + K ENP A F ++ +LG KWKN+S E+K+
Sbjct: 33 KRVTRKKKDPNAPKRSMSAYMFFANENRDIVKSENPNATFGQLGKLLGEKWKNMSTEDKE 92
Query: 221 PYEEKYQAEKEAY 233
PY+ K A+K+ Y
Sbjct: 93 PYDAKAAADKKRY 105
>gi|168032698|ref|XP_001768855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168032700|ref|XP_001768856.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679967|gb|EDQ66408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679968|gb|EDQ66409.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 110
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKR 334
K KK KDP PK P TA+F+F +E R +N K V V K GE+WK+M+E +K+
Sbjct: 1 KGGKKLKDPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQ 60
Query: 335 PYEEIAKKNKEKYNEEMEAYKRR 357
P+ A + K +Y++ + AY ++
Sbjct: 61 PFMTKAVQKKSEYDKTISAYNKK 83
>gi|145323962|ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191890|gb|AEE30011.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 140
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K GE+WK++++ +K PY A
Sbjct: 30 KDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKA 89
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
K K +Y + M+AY ++++E
Sbjct: 90 DKRKVEYEKNMKAYNKKLEE 109
>gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|75220405|sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High
mobility group protein B 2; Short=AtHMGbeta2; Short=HMG
beta 2; AltName: Full=Nucleosome/chromatin assembly
factor group D 03; Short=Nucleosome/chromatin assembly
factor group D 3
gi|15724174|gb|AAL06479.1|AF411789_1 At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|1694976|emb|CAA70691.1| HMG1 [Arabidopsis thaliana]
gi|2832361|emb|CAA74402.1| HMG protein [Arabidopsis thaliana]
gi|20453325|gb|AAM19901.1| At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|21537072|gb|AAM61413.1| unknown [Arabidopsis thaliana]
gi|22530942|gb|AAM96975.1| expressed protein [Arabidopsis thaliana]
gi|23198424|gb|AAN15739.1| expressed protein [Arabidopsis thaliana]
gi|332191888|gb|AEE30009.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 141
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K GE+WK++++ +K PY A
Sbjct: 30 KDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKA 89
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
K K +Y + M+AY ++++E
Sbjct: 90 DKRKVEYEKNMKAYNKKLEE 109
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P F E + +WK +S EKK + + +K+ + M
Sbjct: 17 FVQTCRE---EHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKDKKRFDSEM 73
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
A +K +++KK K+ KDP PK P++A+F
Sbjct: 74 A-----------------------------DYKPPKGEKSKKRKRTKDPNAPKRPLSAFF 104
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + + + +V EVAK G W ++ ++ K YE +A K+K +Y +E++AYK
Sbjct: 105 WFCNDERPNVRQESPDASVGEVAKELGRRWNDVGDDTKSKYEGLAAKDKARYEKELKAYK 164
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 152 LPIVQCLKDKE-QDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAK 210
+P V DK+ R KK + KR Y+ + +D K ENP+A+F + +LGAK
Sbjct: 1 MPKVSTKDDKKVAKRGKKDPNKPKRALSAYMFFVQDWRERIKSENPDADFGSVGRLLGAK 60
Query: 211 WKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEA 246
W+ +SA EKKPYE+K QA+K+ AKE+ E +A
Sbjct: 61 WQEMSASEKKPYEDKAQADKD----RAAKEKAEYDA 92
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP KPK ++AY F + R + ++N + V ++ G +W+ M+ +K+PYE+ A+
Sbjct: 18 KDPNKPKRALSAYMFFVQDWRERIKSENPDADFGSVGRLLGAKWQEMSASEKKPYEDKAQ 77
Query: 342 KNKEKYNEEMEAY 354
+K++ +E Y
Sbjct: 78 ADKDRAAKEKAEY 90
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F++E+R + +N + +V K+ GE WK + E+Q+ PYE
Sbjct: 16 KKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYEA 75
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
A +K++Y +E +Y R K
Sbjct: 76 KAAADKKRYEDEKASYNARRK 96
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q + ++ENP F ++ +LG +WK ++ +++ PYE K A+K+ Y
Sbjct: 25 KRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYEAKAAADKKRY 84
>gi|1813329|dbj|BAA19156.1| HMG-1 [Canavalia gladiata]
Length = 141
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F SE R NK+V V K G++WK++++ +K P+
Sbjct: 29 KAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKSVAVVGKAGGDKWKSLSDAEKAPFV 88
Query: 338 EIAKKNKEKYNEEMEAYKRRM 358
A+K KE+Y++ + AY R++
Sbjct: 89 ARAEKKKEEYDKSILAYNRKL 109
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 153
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 31 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 86
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 87 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 116
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 117 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKYEKDVADYK 176
Query: 356 RRMK 359
+ K
Sbjct: 177 SKGK 180
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 109 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKY 168
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKY 153
>gi|340923867|gb|EGS18770.1| hypothetical protein CTHT_0053790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 576
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LF+++ R L N + E+AK+ GE W+N+T E+K
Sbjct: 107 KYRRHPKPDEN--APERPPSAYVLFANKMREDLKGRNLSFTEMAKLVGENWQNLTPEEKE 164
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
PYE A++ K+KY E+ YK+
Sbjct: 165 PYETQAQRCKDKYLAELAEYKK 186
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ + K N F E+ ++G W+N++ EEK+PYE + Q K+ YL
Sbjct: 121 RPPSAYVLFANKMREDLKGRN--LSFTEMAKLVGENWQNLTPEEKEPYETQAQRCKDKYL 178
Query: 235 QVMAKERRESEAMKLLE 251
+A+ ++ E K E
Sbjct: 179 AELAEYKKTPEYRKYQE 195
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 40/180 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +S E+ K +E+ +A+K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDASVNFAEFSKKCSERWKTMSKEKTK-FEDMAKADKVRYEREM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K + KDP PK P +A+F
Sbjct: 75 --------------------------KSYIPPKGETKK------RFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF S+ R + ++ + ++AK GE W N + K PYE A K KEKY +++ AY+
Sbjct: 103 LFCSDFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYR 162
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C D + K E+P + +I LG W N + ++K PYE + KE Y
Sbjct: 95 KRPPSAFFLFCSDFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 EKDVAAYR 162
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAKLKEKY 153
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 40/180 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +S E+ K +E+ +A+K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDASVNFAEFSKKCSERWKTMSKEKTK-FEDMAKADKVRYEREM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K + KDP PK P +A+F
Sbjct: 75 --------------------------KSYIPPKGETKK------RFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF S+ R + ++ + ++AK GE W N + K PYE A K KEKY +++ AY+
Sbjct: 103 LFCSDFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYR 162
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C D + K E+P + +I LG W N + ++K PYE + KE Y
Sbjct: 95 KRPPSAFFLFCSDFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 EKDVAAYR 162
>gi|302699233|ref|NP_001181871.1| transcription factor A, mitochondrial precursor [Pan troglodytes]
Length = 246
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 104/189 (55%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q + K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 51 KKPVSSYLRFSKEQLPKFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ +++ + + +++ E E+++++L+ K KKE L KPK P
Sbjct: 111 KEEISRFKEQLTPSQIMSLEK------EIMDKHLKRKAMTK------KKELTLLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY ++ +ER D+ E K E WKN+++ +K Y + AK+++ +Y+ EM+
Sbjct: 159 RSAYNVYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 216
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 217 SWEEQMIEV 225
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 52 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 107
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 108 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 137
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 138 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 197
Query: 356 RRMK 359
+ K
Sbjct: 198 SKGK 201
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 130 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 189
>gi|347962987|ref|XP_311155.4| AGAP000005-PA [Anopheles gambiae str. PEST]
gi|333467412|gb|EAA06432.5| AGAP000005-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 33/184 (17%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PE + F E + +WK + +EK+ + E AEK+
Sbjct: 229 FVQTCRE---EHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHE--MAEKD------ 277
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 278 -KARYELE-----------------MQSYVPPKGAVVGRGKKRKQFKDPNAPKRSLSAFF 319
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F + R + A N V ++AK G +W +M E K+ YE++A+K+K++Y +EM YK
Sbjct: 320 WFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEIKQKYEQMAEKDKQRYEQEMTEYK 379
Query: 356 RRMK 359
+ K
Sbjct: 380 LKCK 383
>gi|321249260|ref|XP_003191397.1| protein HMG1 [Cryptococcus gattii WM276]
gi|317457864|gb|ADV19610.1| HMG1, putative [Cryptococcus gattii WM276]
Length = 926
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 21/147 (14%)
Query: 208 GAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYL 267
G + N+SAE KK Y E+ + +E Y AKE +A L E+ + + A
Sbjct: 509 GVAYANLSAERKKYYAERVKEHREIY----AKELAAWQAT-LTPEDIRAENA-------- 555
Query: 268 QFKQEADKENKKPKKE-KDPLKPKHPVTAYFLF------SSERRAALLADNKNVLEVAKI 320
F+ + KE K K KDP PK P++AYFLF +S+ RA + + + +
Sbjct: 556 -FRAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKAIRENSDIRAQVWGTEAETTKQSVM 614
Query: 321 TGEEWKNMTEEQKRPYEEIAKKNKEKY 347
E+W+++T+++KRPY E A+ +K+ Y
Sbjct: 615 AAEKWRSLTDDEKRPYLEQAEHDKQTY 641
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P F E + +WK +S EKK + + +K+ + M
Sbjct: 17 FVQTCRE---EHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADKDKKRFDSEM 73
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
A +K +++KK K+ KDP PK P++A+F
Sbjct: 74 A-----------------------------DYKPPKGEKSKKRKRTKDPNAPKRPLSAFF 104
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + + + +V EVAK G W ++ ++ K YE +A K+K +Y +E++AYK
Sbjct: 105 WFCNDERPNVRQESPDASVGEVAKELGRRWNDVGDDTKSKYEGLAAKDKARYEKELKAYK 164
>gi|426255984|ref|XP_004021627.1| PREDICTED: transcription factor A, mitochondrial-like [Ovis aries]
Length = 246
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ + Y
Sbjct: 51 KKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
E + ++E+ + L ++ +Q + K+ K+E L KPK P
Sbjct: 111 ----------KEEINRIQEQLTPSQIVSLEKEIMQ--KRLKKKALIKKRELTMLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+AY +F +ER + K+ K+ E WKN++ QK+ Y ++AK +K +Y E
Sbjct: 159 RSAYNIFIAER----FQETKDGTSQVKLKAINENWKNLSNSQKQVYIQLAKDDKIRYYNE 214
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 215 MKSWEEQMMEV 225
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 38/174 (21%)
Query: 190 EAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK+NPE F E + +WK +SA+EK +++ +A+K Y
Sbjct: 26 EHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKFDDLAKADKVRY-------------- 71
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+ E K ++ ++ +KDP PK P + +FLF SE R +
Sbjct: 72 ---DREMKDFGPVKKGKK-----------------KKDPNAPKRPPSGFFLFCSEFRPKI 111
Query: 308 LADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+ N + +VAK GE W N+ + +K+PY A K KEKY +++ YK + K
Sbjct: 112 KSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKYEKDVADYKSKGK 165
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N++ EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKY 153
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +S++EK +EE + +K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + +K K+KDP PK P +A+F
Sbjct: 76 --------------------------------KNYVPPKGEKKGKKKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + D+ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKSK 167
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K ++P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKERRESEA 246
+ +A R +S++
Sbjct: 156 EKDIAAYRAKSKS 168
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y L+ + E KK++PE F E + +W+ +SA+EK +EE L
Sbjct: 31 YALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWETMSAKEKSKFEE---------LSKE 81
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R ESE ++ Y+ K KK KK+KDP PK P + +F
Sbjct: 82 DKKRYESE-----------------MKDYV-----PPKGAKKQKKKKDPNAPKRPPSGFF 119
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+FS+ R + ++ ++AK GE+W M E+K PYE+ A K KEKY +++ AY+
Sbjct: 120 IFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYR 179
Query: 356 RRMK 359
+ K
Sbjct: 180 AKTK 183
>gi|170028315|ref|XP_001842041.1| transcription factor A, mitochondrial [Culex quinquefasciatus]
gi|167874196|gb|EDS37579.1| transcription factor A, mitochondrial [Culex quinquefasciatus]
Length = 261
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP YI + + K +NP+A EI+ + A+W+ + K E +Y+ ++ +
Sbjct: 47 KRPVNAYIRFLQSIRPALKSKNPKASPTEISKLAAAQWQVLDLANKSKLEVEYKKDQAVW 106
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
LQ AK + L +E K++ +E+ +++A +E++ K+ KD KPK P+
Sbjct: 107 LQQNAK------YLSQLTDEQKEEIRQSRVEKS---EEKAKREHR--KRVKDLGKPKRPL 155
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+ L+ +++ L ++N ++ ++ E+W ++E QK PY+ A KY E+M
Sbjct: 156 NGFLLYCQDQKPKNLTRDENRSQIKSLS-EQWSKLSETQKEPYQRRAADAVAKYREDMLK 214
Query: 354 YKRRM 358
++ +M
Sbjct: 215 WEEKM 219
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 22 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRY---- 77
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 78 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 107
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 108 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYK 167
Query: 356 RRMK 359
+ K
Sbjct: 168 SKGK 171
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 100 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKY 159
>gi|348517941|ref|XP_003446491.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like
[Oreochromis niloticus]
Length = 474
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W+++S EEK+ Y +Y+AEK
Sbjct: 70 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIEYNDSLK 129
Query: 231 -----EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKD 285
AYL + + R AM+ EE ++++ M+ E Y+ + D P D
Sbjct: 130 AYHNSPAYLAYINAKNRAEAAME--EESRQRQSRMDKGEPYMSIQPAED-----PDDYDD 182
Query: 286 PLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH A F L S ++ D ++V+ A++
Sbjct: 183 GFSVKHTAAARFQRNHRLISDILSEIVVPDVRSVVTTARM 222
>gi|301094892|ref|XP_002896549.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108943|gb|EEY66995.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 498
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Query: 176 PSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKYQA 228
P Y ++ + E ++P + +I +G WK +S E+ Y+ E+++A
Sbjct: 297 PRNSYSVYLSTKRQEMAAQHPNHKNSQIMREIGIAWKALSDVERALYQRKAEEDVERFRA 356
Query: 229 EKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLK 288
E EA+L A++ +E H + +Q L E K +K++ +
Sbjct: 357 EMEAHL---AQQ----------QEGHHGAANHDQHDQQLSVVHEKVKARVVGRKQRKVIP 403
Query: 289 PKHPVTAYFLFSSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY 347
P+ P TAY L +R LLA + + E + + G W+ M EE++ PY+ +A ++K +Y
Sbjct: 404 PRRPKTAYNLMYMSKRTELLATYQMSHNECSALCGRLWRQMPEEEREPYKRMAAEDKRRY 463
Query: 348 NEEMEAY 354
E+E Y
Sbjct: 464 EVELEIY 470
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
YI + + + + +++++ LG +WK ++A E+K + E Q + K
Sbjct: 23 YIHYSRSHRDGVVAAHLSWSVQQVSSELGRQWKALTAAERKSWIELAQFD---------K 73
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKK--PKKEKDPLKPKHPVTAYF 297
R +EA + + KQ+AD + + K++K +P+ P TAY
Sbjct: 74 ARFHTEACQQIR------------------KQQADGQPAQLSIKRKKQANEPRQPDTAYI 115
Query: 298 LFSSERRAALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
F RR ++A N ++ V+K +W+ +++ +++ +E++A K+K ++ EE+
Sbjct: 116 CFWKSRRPEVVAANPSLGAQLVSKEVARQWRALSDSERQVWEDMATKDKLRFQEEI 171
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
++KK E ++P YI + K + E NP + ++ + +W+ +S E++ +E+
Sbjct: 99 KRKKQANEPRQPDTAYICFWKSRRPEVVAANPSLGAQLVSKEVARQWRALSDSERQVWED 158
Query: 225 KYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEK 284
+K ++ EE + + Q L + K
Sbjct: 159 MATKDK----------------LRFQEEIARMHPTLAAAPQSL---------SAVSAPLK 193
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP PK T + LF S R + N + + + WK +++ K + E+A +++
Sbjct: 194 DPFAPKPAKTGFQLFMSHNRESFTLLNMTINDFRTEMSQLWKRLSDVDKNEWYELATQDE 253
Query: 345 EKYNEEMEAYK 355
++Y E+ AYK
Sbjct: 254 QRYEREVNAYK 264
>gi|149054159|gb|EDM05976.1| rCG34563, isoform CRA_d [Rattus norvegicus]
Length = 256
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 187 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K G++WK++++ +K PY A
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKAPYVAKA 92
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+K K Y + M+AY ++++E
Sbjct: 93 EKRKVDYEKNMKAYNKKLEE 112
>gi|148701877|gb|EDL33824.1| mCG140646 [Mus musculus]
Length = 207
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ QE K KK KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPPQEETK-----KKFKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ V +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 105 LFCSEYHPKIKGEHPGLCVGDVAKKLGELWNNTAGDDKQPYEKKAAKLKEKYEKDIAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPE F E + +W+ +S +EK +++ +A+K Y
Sbjct: 19 FVQTCRE---EHKKKNPEIPVNFSEFSKKCSERWRGMSGKEKSKFDDLAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE + +++ K+K DP PK P + +F
Sbjct: 72 ---DREMQDFGPVKKGKKKK---------------------------DPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGITIGDVAKKLGEMWNNLSDSEKQPYNNKGAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGITIGDVAKKLGEMWNNLSDSEKQPYNNKGAKLKEKY 153
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPY 336
K + +KDP PK ++AY F++E+R + +N V +V KI GE WK ++++Q+ PY
Sbjct: 14 KRRGKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPY 73
Query: 337 EEIAKKNKEKYNEEMEAY 354
E A +K++Y +E +AY
Sbjct: 74 EAKAAADKKRYEDEKQAY 91
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ ILG +WK +S +++ PYE K A+K+ Y
Sbjct: 25 KRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRY 84
>gi|402591482|gb|EJW85411.1| FACT complex subunit SSRP1-A [Wuchereria bancrofti]
Length = 684
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPY 336
+++ KK+KDP PK P +AYF++ E ++ + +V E A+ G+ WK + EE K+ Y
Sbjct: 537 SRREKKKKDPNAPKKPQSAYFIWFGENYSSFKKEGVSVTEAAQRAGKMWKEIDEETKKKY 596
Query: 337 EEIAKKNKEKYNEEMEAY 354
EE AK++KE+Y EM+ Y
Sbjct: 597 EERAKEDKERYAREMKEY 614
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 153
>gi|295913307|gb|ADG57910.1| transcription factor [Lycoris longituba]
Length = 138
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R +NK V V K G++WK+M+ +K PYE A
Sbjct: 18 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 77
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K YN+ M AY +++ +
Sbjct: 78 KRKVDYNKTMVAYNKKLAD 96
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPY 336
K + +KDP PK ++AY F++E+R + +N V +V KI GE WK ++++Q+ PY
Sbjct: 14 KKRSKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPY 73
Query: 337 EEIAKKNKEKYNEEMEAY 354
E A +K++Y +E +AY
Sbjct: 74 EAKAAADKKRYEDEKQAY 91
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 167 KKGCAERKR----PSPP------YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSA 216
+ G AE+KR P+ P Y+ + +Q ++ENP F ++ ILG +WK +S
Sbjct: 8 RSGKAEKKRSKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSD 67
Query: 217 EEKKPYEEKYQAEKEAY 233
+++ PYE K A+K+ Y
Sbjct: 68 KQRAPYEAKAAADKKRY 84
>gi|149054160|gb|EDM05977.1| rCG34563, isoform CRA_e [Rattus norvegicus]
Length = 186
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 2 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 61
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 62 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 116
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH TA F L S +++ D ++V+ A++
Sbjct: 117 SMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARM 154
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 153
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
K KKEKDP PK P++ Y +FS+E RA + +N + + +VAK G WK++T+E+K Y
Sbjct: 570 KKKKEKDPNAPKRPLSTYMIFSAEMRAKVKEENPDFSITDVAKELGVRWKSVTDEEKVKY 629
Query: 337 EEIAKKNK 344
EE+AKK+K
Sbjct: 630 EELAKKDK 637
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
KRP Y+++ + + K+ENP+ ++ LG +WK+V+ EEK YEE
Sbjct: 581 KRPLSTYMIFSAEMRAKVKEENPDFSITDVAKELGVRWKSVTDEEKVKYEE 631
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +SA+EK +E+ + +K Y
Sbjct: 19 FVQTCRE---EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKVDKACY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KLKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK G+ W N K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGKMWNNTAANDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A +K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGKMWNNTAANDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R L + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKLKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 271 QEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWK 326
+ A K++K+ KK DP PK +++Y F+ E+RA L+ +N ++V V K+ G W
Sbjct: 7 KSAGKKSKRAKK--DPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWN 64
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
++ E +K PYE++A+ ++ +Y +E AY
Sbjct: 65 SLDESEKAPYEKLAEADRARYEKEKAAY 92
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +S++EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKADKLRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E+E ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 -------------EKE---------MKNYVPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 33/184 (17%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PE + F E + +WK + +EK+ + E
Sbjct: 50 FVQTCRE---EHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHE------------- 93
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E+ KQ+ +E ++ Y+ K KK K KDP PK ++A+F
Sbjct: 94 ------------MAEKDKQRYELE-MQNYVPPKGTVVGRGKKRKAFKDPNAPKRSLSAFF 140
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F + R + A N V ++AK G +W +M E K YE++A+K+K +Y +EM YK
Sbjct: 141 WFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEVKSKYEQMAEKDKARYEQEMTEYK 200
Query: 356 RRMK 359
+ K
Sbjct: 201 LKCK 204
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW ++ AE K YE+ + +K Y
Sbjct: 133 KRSLSAFFWFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEVKSKYEQMAEKDKARY 192
Query: 234 LQVMA 238
Q M
Sbjct: 193 EQEMT 197
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +S++EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKADKLRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E+E ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 -------------EKE---------MKNYVPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +S++EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKADKLRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E+E ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 -------------EKE---------MKNYVPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +S++EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKADKLRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E+E ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 -------------EKE---------MKNYVPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSEFDEMAKADKVCY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP PK ++AY F++E+R + +N V +V KI GE WK ++++Q+ PYE A
Sbjct: 21 KDPNAPKRGLSAYMFFANEQRENVREENPGVTFGQVGKILGERWKALSDKQRAPYEAKAA 80
Query: 342 KNKEKYNEEMEAY 354
+K++Y +E +AY
Sbjct: 81 ADKKRYEDEKQAY 93
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 162 EQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP 221
E+ R KK KR Y+ + +Q ++ENP F ++ ILG +WK +S +++ P
Sbjct: 15 EKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVTFGQVGKILGERWKALSDKQRAP 74
Query: 222 YEEKYQAEKEAY 233
YE K A+K+ Y
Sbjct: 75 YEAKAAADKKRY 86
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 32/178 (17%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
++ C+++ ++ K N F E + +WK +S EKK + + +K+ + MA
Sbjct: 17 FVQTCREE-HKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKDKKRFDTEMA- 74
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
+K ++KK K+ KDP PK P++A+F F
Sbjct: 75 ----------------------------DYKPPKGDKSKKRKRAKDPNAPKRPLSAFFWF 106
Query: 300 SSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
++ R + +N +V EVAK G W + ++ K YE +A K+K +Y +E++AYK
Sbjct: 107 CNDERPNVRQENPDSSVGEVAKELGRRWNEVGDDVKAKYEGLAAKDKARYEKELKAYK 164
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKY 153
>gi|326437876|gb|EGD83446.1| hypothetical protein PTSG_04053 [Salpingoeca sp. ATCC 50818]
Length = 797
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 44/186 (23%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y LW ++ K+++P+ F E++ LG W++++ E+K + EK AK
Sbjct: 584 YALWSSSARSKLKEQHPDLSFGELSKKLGQAWQDLADEDKAEWNEK------------AK 631
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKEN-------KKPKKEKDPLKPKHP 292
E R+ +YL+ K++ D EN KK +K+KDP PK
Sbjct: 632 EDRQ---------------------RYLKEKKKFDAENPDAAKPAKKMRKKKDPNAPKGA 670
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
+AY FS+E R + + K L + +I+ G W+ +++E+K+ YE++A ++K++Y
Sbjct: 671 KSAYIYFSTEMREKI-KEEKPDLTLGQISQECGTLWRGLSDEEKKKYEKMAAEDKKRYEA 729
Query: 350 EMEAYK 355
EM YK
Sbjct: 730 EMAEYK 735
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKY 153
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKY 153
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKY 153
>gi|194068385|dbj|BAG55013.1| high mobility group 1 protein [Saccostrea kegaki]
Length = 201
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 282 KEKDP---LKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEE 338
K KDP KPK P +AYF F ++ R + N + E+ K+ GE W+N+ + +K+P+E+
Sbjct: 88 KGKDPSEAGKPKRPQSAYFCFLADFREKMKGKNIDHKEIIKMAGEAWRNLDDNEKKPFEK 147
Query: 339 IAKKNKEKYNEEMEAYKR 356
+A+K +EKY + + ++R
Sbjct: 148 LAQKEQEKYEQALADWRR 165
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEE---WKNMTEEQ 332
E + +K KDP KPK +AYF F + R + K + ++A+ T E W MT++
Sbjct: 6 EGGRKRKAKDPNKPKRSTSAYFYFLGKMREDAKSSGKPITKIAEFTKESSAKWAKMTDKD 65
Query: 333 KRPYEEIAKKNKEKYNEEMEAYK 355
K P+ + A +K++Y+ EM YK
Sbjct: 66 KEPFNKKAAADKKRYDAEMAVYK 88
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y + D + K +N + KEI + G W+N+ EKKP+E+ Q E+E Y
Sbjct: 99 KRPQSAYFCFLADFREKMKGKN--IDHKEIIKMAGEAWRNLDDNEKKPFEKLAQKEQEKY 156
Query: 234 LQVMAKERRESEA 246
Q +A RR
Sbjct: 157 EQALADWRRGGGG 169
>gi|342319487|gb|EGU11435.1| Non-histone chromosomal protein [Rhodotorula glutinis ATCC 204091]
Length = 142
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNVL---------EVAKITGEEWKNMTEEQKR 334
KDP PK P++AY FS ++R+ + +N +V E+ KI G +WK + E++++
Sbjct: 20 KDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIGKILGAKWKELPEDERK 79
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
PYEE A +K +Y +E AY
Sbjct: 80 PYEEKASADKSRYEKEKAAY 99
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEF-------KEITNILGAKWKNVSAE 217
R KK KRP Y+ + +DQ + K+ENP+ F EI ILGAKWK + +
Sbjct: 17 RAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIGKILGAKWKELPED 76
Query: 218 EKKPYEEKYQAEKEAY 233
E+KPYEEK A+K Y
Sbjct: 77 ERKPYEEKASADKSRY 92
>gi|308498523|ref|XP_003111448.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
gi|308240996|gb|EFO84948.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
Length = 702
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DPL+PK TAYFL+ R + D V +VAK G +WK M + K+ +EE A K+K
Sbjct: 555 DPLEPKRATTAYFLWFQANRLSFKEDGDTVADVAKKGGAKWKEMGSDDKKEWEEKAAKDK 614
Query: 345 EKYNEEMEAYKR 356
+Y EM+ YK+
Sbjct: 615 ARYEAEMKEYKK 626
>gi|291395415|ref|XP_002714100.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKACYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + K K+KDP PK P +A+F
Sbjct: 76 --------------------------------KNYVPPKGAKKGKKKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + ++PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIRSEHSGLSIGDTAKKLGEMWSEQSAKDEQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 90 FVQTCRE---EHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 142
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 143 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 172
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 173 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 232
Query: 356 RRMK 359
+ K
Sbjct: 233 SKGK 236
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 165 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 224
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPY 336
K + +KDP PK ++AY F++E+R + +N + +V KI GE WK + E+Q++PY
Sbjct: 16 KKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRQPY 75
Query: 337 EEIAKKNKEKYNEEMEAY 354
E A +K++Y +E +AY
Sbjct: 76 EAKAATDKKRYEDEKQAY 93
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK-------Y 226
KR Y+ + +Q ++ENP F ++ ILG +WK ++ ++++PYE K Y
Sbjct: 27 KRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRQPYEAKAATDKKRY 86
Query: 227 QAEKEAYLQV 236
+ EK+AY +
Sbjct: 87 EDEKQAYNSI 96
>gi|302803281|ref|XP_002983394.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
gi|300149079|gb|EFJ15736.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
Length = 123
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP +PK P TA+F+F E R D+ K V + K G+ WK++++++K PY A
Sbjct: 18 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 77
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K Y++++EAY ++ +E
Sbjct: 78 KRKADYDKDLEAYNKKKEE 96
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 36 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 91
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 92 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 121
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 122 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 181
Query: 356 RRMK 359
+ K
Sbjct: 182 SKGK 185
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N++ EK+PY K KE Y
Sbjct: 114 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKY 173
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQ 332
+ KK KKEKDP PK TAY +F++E R ADN ++ K ++WK +++++
Sbjct: 39 RATKKGKKEKDPNAPKRAKTAYIIFATEERPRAKADNPELGFGDLTKCVSDKWKALSDDE 98
Query: 333 KRPYEEIAKKNKEKYNEEMEAY 354
K PY E A ++KE+Y +E+ Y
Sbjct: 99 KAPYLEKAAQDKERYADEVSKY 120
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR YI++ ++ AK +NPE F ++T + KWK +S +EK PY EK +KE Y
Sbjct: 54 KRAKTAYIIFATEERPRAKADNPELGFGDLTKCVSDKWKALSDDEKAPYLEKAAQDKERY 113
Query: 234 LQVMAK 239
++K
Sbjct: 114 ADEVSK 119
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 39/180 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +S +EK +E+ + +K Y + M
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDMAKLDKVRYERDM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + +K K+ KDP PK P +A+F
Sbjct: 75 --------------------------------KNYDPPKGQKKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + R + +++ + + AK GE W + + E K+PYE A K KEKY++++ AY+
Sbjct: 103 LFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENKQPYERKAAKLKEKYDKDIVAYR 162
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C D + K E+P + LG W + SAE K+PYE K KE Y
Sbjct: 95 KRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENKQPYERKAAKLKEKY 154
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KPK +++Y F E + + N E +K E WK M++++K +E++
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDM 62
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y +M+ Y
Sbjct: 63 AKLDKVRYERDMKNY 77
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKLKEKY 153
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 153
>gi|332254661|ref|XP_003276450.1| PREDICTED: high mobility group protein B4 [Nomascus leucogenys]
Length = 189
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP P+ P +++ LF + A L +N N V++VAK TGE W T+ +K PYE+ A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGEMWSTTTDLEKHPYEQRAAL 148
Query: 343 NKEKYNEEMEAYKRRMKEL 361
+ KY EE+E Y+++ K+
Sbjct: 149 LRAKYFEELELYRKQHKQC 167
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGEMWSTTTDLEKHPYEQRAALLRAKY 153
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTA 259
E ++L ++HKQ A
Sbjct: 154 F----------EELELYRKQHKQCNA 169
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S++EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 153
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +S++EK +EE + +K Y + M
Sbjct: 16 YAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + +K K+KDP PK P +A+F
Sbjct: 76 --------------------------------KNYVPPKGEKKGKKKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + D+ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKSK 167
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLF----SSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E ++ E WK M+ ++K +EE+A
Sbjct: 5 DPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y+ EM+ Y
Sbjct: 65 KGDKARYDREMKNY 78
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K ++P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKERRESEA 246
+ +A R +S++
Sbjct: 156 EKDIAAYRAKSKS 168
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P+ ++ + K +NP + +I ++LG W + +K Y+ ++KE Y
Sbjct: 16 KKPTTAFMYFSNAMRERVKTQNPGLKMTDIASVLGKLWGQLPEADKDKYQTMANSDKERY 75
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ M + Y+ K KK KDP PK P
Sbjct: 76 AKAM--------------------------DGYVAPVSTGGKSG---KKSKDPNAPKRPP 106
Query: 294 TAYFLFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+AY F++ R L + + ++ GE W+ +T++ K PY + A+ K K+ EM
Sbjct: 107 SAYICFANAVRPELRKTYPSDTMPAISTKIGELWRQLTDDNKEPYNKQAEALKLKFQTEM 166
Query: 352 EAYK 355
AYK
Sbjct: 167 AAYK 170
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
K EKDP KPK P TA+ FS+ R + N + ++A + G+ W + E K Y+
Sbjct: 7 KDEKDPNKPKKPTTAFMYFSNAMRERVKTQNPGLKMTDIASVLGKLWGQLPEADKDKYQT 66
Query: 339 IAKKNKEKYNEEMEAY 354
+A +KE+Y + M+ Y
Sbjct: 67 MANSDKERYAKAMDGY 82
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NP+ F E + +WK +S +EK + E +A+K Y Q +
Sbjct: 16 YAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQEI 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
D K K+KDP PK P + +F
Sbjct: 76 K-----------------------------------DYGPAKGGKKKDPNAPKRPPSGFF 100
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + N + +VAK GE WKN+ + +K+PY A K KEKY +++ YK
Sbjct: 101 LFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYK 160
Query: 356 RRMK 359
+ K
Sbjct: 161 SKGK 164
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY-------EEKY 226
KRP + L+C + ++K NP ++ LG WKN++ EK+PY +EKY
Sbjct: 93 KRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKY 152
Query: 227 QAEKEAY 233
+ + Y
Sbjct: 153 EKDVAVY 159
>gi|356508616|ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine max]
Length = 152
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRP 335
K K KDP KPK P +A+F+F E R DNK V V K G +WK M++ +K P
Sbjct: 34 KGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPDNKAVSAVGKAAGAKWKTMSDAEKAP 93
Query: 336 YEEIAKKNKEKYNEEMEAYKRRMKE 360
Y ++K K +Y + M AY ++ E
Sbjct: 94 YVAKSEKRKVEYEKNMRAYNKKQAE 118
>gi|322517988|gb|ADX06860.1| high mobility group protein B1 [Sciaenops ocellatus]
Length = 206
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 39/182 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +S++EK +E+ L
Sbjct: 18 FVQTCRE---EHKKKHPDASVNFAEFSKKCSGRWKTMSSKEKGKFED---------LARQ 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E M + +K KK KDP PK P +A+F
Sbjct: 66 DKARYEREMMSYVPARGGKK-----------------------KKYKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + A + EVAK GE W E K+P+E+ A K KEKY +E+ AY+
Sbjct: 103 IFCSEFRPKVKGEAPGLTIGEVAKRLGEMWNGTASEDKQPFEKKAAKLKEKYEKEVAAYR 162
Query: 356 RR 357
++
Sbjct: 163 QK 164
>gi|74180039|dbj|BAE36556.1| unnamed protein product [Mus musculus]
Length = 243
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 101/190 (53%), Gaps = 17/190 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q + K ++P+A+ E+ + A W+ + +KK YE ++AE +AY
Sbjct: 50 KKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAKKKVYEADFKAEWKAY 109
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL--KPKH 291
+ ++K + +Q T +L+ + +Q K+ K+ + L KPK
Sbjct: 110 KEAVSKYK-------------EQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKR 156
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P +AY ++ SE A + + K+ E WKN++ E+K+ Y ++AK ++ +Y+ EM
Sbjct: 157 PRSAYNIYVSESFQE--AKDDSAQGKLKLVNEAWKNLSPEEKQAYIQLAKDDRIRYDNEM 214
Query: 352 EAYKRRMKEL 361
++++ +M E+
Sbjct: 215 KSWEEQMAEV 224
>gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
gi|297336244|gb|EFH66661.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K GE+WK++++ +K PY A
Sbjct: 32 KDPNKPKRPSSAFFVFMEDFRETYKKEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKA 91
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
K K +Y + M+AY ++++E
Sbjct: 92 DKRKVEYEKNMKAYNKKLEE 111
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 215
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K +DP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFEDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK G+ W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGKMWSNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGKMWSNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|302754440|ref|XP_002960644.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
gi|300171583|gb|EFJ38183.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
Length = 134
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP +PK P TA+F+F E R D+ K V + K G+ WK++++++K PY A
Sbjct: 32 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 91
Query: 342 KNKEKYNEEMEAYKRR 357
K K Y++++EAY ++
Sbjct: 92 KRKADYDKDLEAYNKK 107
>gi|968888|dbj|BAA09924.1| HMG-1 [Homo sapiens]
Length = 215
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E KK KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A+K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAEKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F++E R + A+N + +V K+ GE+WK MT + K PYE
Sbjct: 11 RKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMTSDDKTPYES 70
Query: 339 IAKKNKEKYNEEMEAYKRR 357
A+ +K++Y +E Y ++
Sbjct: 71 KAEADKKRYEKEKAEYAKK 89
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K RKKK KR Y+ + + + + ENP F ++ +LG KWK +++++K
Sbjct: 7 KRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMTSDDKT 66
Query: 221 PYEEKYQAEKEAY 233
PYE K +A+K+ Y
Sbjct: 67 PYESKAEADKKRY 79
>gi|302309760|ref|XP_002999554.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049084|emb|CAR57991.1| unnamed protein product [Candida glabrata]
Length = 93
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRP 335
K +++KDP PK ++AY F++E R + ++N +V ++ ++ GE WK +T E K+P
Sbjct: 10 KTTRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVTFGQIGRLLGERWKALTAEDKQP 69
Query: 336 YEEIAKKNKEKYNEEMEAY 354
YE A+ +K++Y E E Y
Sbjct: 70 YEAKAEADKKRYESEKELY 88
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R+KK KR Y+ + + + + ENP+ F +I +LG +WK ++AE+K+PYE
Sbjct: 13 RRKKDPNAPKRALSAYMFFANENRDIVRSENPDVTFGQIGRLLGERWKALTAEDKQPYEA 72
Query: 225 KYQAEKEAY 233
K +A+K+ Y
Sbjct: 73 KAEADKKRY 81
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F+++ R + +N + +V K+ GE+WK++++++++PYE+
Sbjct: 19 RKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYED 78
Query: 339 IAKKNKEKYNEEMEAYK 355
A +K++Y +E AYK
Sbjct: 79 KAAADKKRYEDEKAAYK 95
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KR Y+ + D ++ ++ENP F ++ +LG KWK++S +E+KPYE+
Sbjct: 19 RKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYED 78
Query: 225 KYQAEKEAY 233
K A+K+ Y
Sbjct: 79 KAAADKKRY 87
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
Length = 94
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 273 ADKENKK--PKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNM 328
A +E KK +++KDP PK ++AY F++E R + ++N +V +V KI GE WK +
Sbjct: 3 APRETKKRSTRRKKDPNAPKRALSAYMFFANETRDIVRSENPDVTFGQVGKILGERWKAL 62
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ E+K PYE A+ +K++Y E E Y
Sbjct: 63 SAEEKVPYETKAEADKKRYESEKELY 88
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG +WK +SAEEK
Sbjct: 9 KRSTRRKKDPNAPKRALSAYMFFANETRDIVRSENPDVTFGQVGKILGERWKALSAEEKV 68
Query: 221 PYEEKYQAEKEAY 233
PYE K +A+K+ Y
Sbjct: 69 PYETKAEADKKRY 81
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F++E R + +N + +V K+ GE WK +++ ++RPYEE
Sbjct: 17 RKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDSERRPYEE 76
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E +Y
Sbjct: 77 KAAADKKRYEDEKASY 92
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAE 217
K K +RKKK KR Y+ + + ++ ++ENP F ++ +LG +WK +S
Sbjct: 10 TKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDS 69
Query: 218 EKKPYEEKYQAEKEAY 233
E++PYEEK A+K+ Y
Sbjct: 70 ERRPYEEKAAADKKRY 85
>gi|328773430|gb|EGF83467.1| hypothetical protein BATDEDRAFT_85013 [Batrachochytrium
dendrobatidis JAM81]
Length = 505
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P+ AY LF + + DN + +V I G W+++T+ QK+PY ++A
Sbjct: 89 DPNAPKRPIPAYVLFVKSQYQKIAEDNPELKPKDVMVILGAHWRDLTDTQKQPYLDMAAT 148
Query: 343 NKEKYNEEMEAYKRRMK 359
+E+Y +MEAYK +++
Sbjct: 149 YREQYTFDMEAYKDKLR 165
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP-------YEEKY 226
KRP P Y+L+ K Q+ + ++NPE + K++ ILGA W++++ +K+P Y E+Y
Sbjct: 94 KRPIPAYVLFVKSQYQKIAEDNPELKPKDVMVILGAHWRDLTDTQKQPYLDMAATYREQY 153
Query: 227 QAEKEAY 233
+ EAY
Sbjct: 154 TFDMEAY 160
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 48/190 (25%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPY-------EEKYQ 227
+ PY + K + E KK+ P + EI+ KWK +S +EK+ + E+YQ
Sbjct: 31 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQ 90
Query: 228 AEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL 287
AE AY D K+ + +KDP
Sbjct: 91 AEVAAY-------------------------------------GGEDALRKRKRVKKDPN 113
Query: 288 KPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
PK ++A+F FS ++R + + V +VA+ G WK + EE++ YE A ++KE
Sbjct: 114 APKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKALGEEERAVYERKALEDKE 173
Query: 346 KYNEEMEAYK 355
+Y EEM YK
Sbjct: 174 RYAEEMRNYK 183
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 260 MELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF--LFSSERRAALLADNKNVLEV 317
+ LLE + F Q +E+ KP P++ K +F + E + +N V E+
Sbjct: 6 LGLLEAII-FDQRRMRESAKP-----PVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEI 59
Query: 318 AKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+K E+WK M++++KR + E+A+K+ E+Y E+ AY
Sbjct: 60 SKKCSEKWKTMSDDEKRRFFELAQKDAERYQAEVAAY 96
>gi|320170534|gb|EFW47433.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 851
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P P ++ + + + + P+ + +I +G W + EEK YE+ A+K Y
Sbjct: 441 KKPIPAFLYFGRAVRPQVRAMYPDDKLADIATKIGKLWAALPFEEKAHYEQLASADKLRY 500
Query: 234 LQVMAKER--RESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKH 291
+ ++ A L + +T +E L +K K+ KDP PK
Sbjct: 501 REEASQPSYAVAPGAAALASRANTSQTGLETL--------------RKIKRRKDPAAPKR 546
Query: 292 PVTAYFLFSSERRAALLADNKNVLE--VAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
AY ++ R+++ AD+ +A GE W+ + ++ P+E +A+++K++Y+
Sbjct: 547 ASPAYLFYAQHARSSVAADDPTASNKAIASKLGEMWRALPVGERAPFEALAQRDKDRYDS 606
Query: 350 E 350
E
Sbjct: 607 E 607
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
+++K A KR SP Y+ + + + ++P A K I + LG W+ + E+ P+E
Sbjct: 536 KRRKDPAAPKRASPAYLFYAQHARSSVAADDPTASNKAIASKLGEMWRALPVGERAPFEA 595
Query: 225 KYQAEKEAY 233
Q +K+ Y
Sbjct: 596 LAQRDKDRY 604
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++PE + F+E + +WK +S EKK + E AEK+ K+R ++E
Sbjct: 129 EHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHE--MAEKD-------KKRYDAE-- 177
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA- 306
++ Y K E KK K KD PK ++A+F F ++ R
Sbjct: 178 ---------------MQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKV 222
Query: 307 -LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+L V ++AK G++W + E K YE +A+K+K +Y EM AYK++++
Sbjct: 223 KMLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKIQ 276
>gi|23394916|gb|AAN31640.1|AF484963_1 high mobility group protein 1 [Biomphalaria glabrata]
Length = 215
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 40/184 (21%)
Query: 174 KRPSPPYILWCKDQWNEAKKEN-PEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
KR + Y + EA K + E T KWK +SA++KKP+E +K
Sbjct: 23 KRATSAYFFFLAQCRKEAAKAGKAPTKIAEFTKEASEKWKALSADKKKPFEAAAADDKRR 82
Query: 233 YLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHP 292
Y MA +K K+ DP KPK P
Sbjct: 83 YETEMA--------------VYKGKSV-------------------------DPNKPKRP 103
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
TAYFLF ++ R + E+ K+ GEEW++++ E K+PYE+ A + +KY M
Sbjct: 104 PTAYFLFLADYRIRMANKGIEHKELLKMAGEEWRSLSNEDKKPYEKKALEESKKYESAMT 163
Query: 353 AYKR 356
Y++
Sbjct: 164 EYRK 167
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKRPYE 337
KK KD KPK +AYF F ++ R K ++A+ T E+WK ++ ++K+P+E
Sbjct: 14 KKVKDVNKPKRATSAYFFFLAQCRKEAAKAGKAPTKIAEFTKEASEKWKALSADKKKPFE 73
Query: 338 EIAKKNKEKYNEEMEAYK 355
A +K +Y EM YK
Sbjct: 74 AAAADDKRRYETEMAVYK 91
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y L+ D + N E KE+ + G +W+++S E+KKPYE+K E + Y
Sbjct: 101 KRPPTAYFLFLADY--RIRMANKGIEHKELLKMAGEEWRSLSNEDKKPYEKKALEESKKY 158
Query: 234 LQVMAKERRESEA 246
M + R+ A
Sbjct: 159 ESAMTEYRKTGGA 171
>gi|4507401|ref|NP_003192.1| transcription factor A, mitochondrial isoform 1 precursor [Homo
sapiens]
gi|426364808|ref|XP_004049486.1| PREDICTED: transcription factor A, mitochondrial isoform 1 [Gorilla
gorilla gorilla]
gi|417324|sp|Q00059.1|TFAM_HUMAN RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
AltName: Full=Mitochondrial transcription factor 1;
Short=MtTF1; AltName: Full=Transcription factor 6;
Short=TCF-6; AltName: Full=Transcription factor 6-like
2; Flags: Precursor
gi|619859|gb|AAA59849.1| mitochondrial transcription factor 1 [Homo sapiens]
gi|54696184|gb|AAV38464.1| transcription factor A, mitochondrial [Homo sapiens]
gi|54696186|gb|AAV38465.1| transcription factor A, mitochondrial [Homo sapiens]
gi|61358678|gb|AAX41606.1| transcription factor A mitochondrial [synthetic construct]
gi|61358685|gb|AAX41607.1| transcription factor A mitochondrial [synthetic construct]
gi|116496711|gb|AAI26367.1| Transcription factor A, mitochondrial [Homo sapiens]
gi|119574558|gb|EAW54173.1| transcription factor A, mitochondrial, isoform CRA_c [Homo sapiens]
gi|119574560|gb|EAW54175.1| transcription factor A, mitochondrial, isoform CRA_c [Homo sapiens]
gi|161579137|gb|ABX72056.1| mitochondrial transcription factor A [Homo sapiens]
gi|189069117|dbj|BAG35455.1| unnamed protein product [Homo sapiens]
gi|208967953|dbj|BAG73815.1| mitochondrial transcription factor A [synthetic construct]
gi|311349578|gb|ADP91974.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349580|gb|ADP91975.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349582|gb|ADP91976.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349584|gb|ADP91977.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349586|gb|ADP91978.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349588|gb|ADP91979.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349590|gb|ADP91980.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349592|gb|ADP91981.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349594|gb|ADP91982.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349596|gb|ADP91983.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349598|gb|ADP91984.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349600|gb|ADP91985.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349602|gb|ADP91986.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349604|gb|ADP91987.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349606|gb|ADP91988.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349608|gb|ADP91989.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349610|gb|ADP91990.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349612|gb|ADP91991.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349614|gb|ADP91992.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349616|gb|ADP91993.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349618|gb|ADP91994.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349620|gb|ADP91995.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349622|gb|ADP91996.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349624|gb|ADP91997.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349626|gb|ADP91998.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349628|gb|ADP91999.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349630|gb|ADP92000.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349632|gb|ADP92001.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349634|gb|ADP92002.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349636|gb|ADP92003.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349638|gb|ADP92004.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349640|gb|ADP92005.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349642|gb|ADP92006.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349646|gb|ADP92008.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349648|gb|ADP92009.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349650|gb|ADP92010.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349652|gb|ADP92011.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349654|gb|ADP92012.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349656|gb|ADP92013.1| mitochondrial transcription factor A [Homo sapiens]
gi|313884046|gb|ADR83509.1| transcription factor A, mitochondrial [synthetic construct]
gi|410214676|gb|JAA04557.1| transcription factor A, mitochondrial [Pan troglodytes]
gi|410252846|gb|JAA14390.1| transcription factor A, mitochondrial [Pan troglodytes]
gi|410290500|gb|JAA23850.1| transcription factor A, mitochondrial [Pan troglodytes]
gi|410349391|gb|JAA41299.1| transcription factor A, mitochondrial [Pan troglodytes]
Length = 246
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ +++ + + +++ E E+++++L+ K KKE L KPK P
Sbjct: 111 KEEISRFKEQLTPSQIMSLEK------EIMDKHLKRKAMTK------KKELTLLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY ++ +ER D+ E K E WKN+++ +K Y + AK+++ +Y+ EM+
Sbjct: 159 RSAYNVYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 216
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 217 SWEEQMIEV 225
>gi|351723773|ref|NP_001235499.1| uncharacterized protein LOC100305957 [Glycine max]
gi|255627099|gb|ACU13894.1| unknown [Glycine max]
Length = 142
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F SE R +NK+V V K G++WK++++ +K P+
Sbjct: 29 KAAKDPNKPKGPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGDKWKSLSDAEKAPFV 88
Query: 338 EIAKKNKEKYNEEMEAYKRRM 358
A+K K++Y + + AY +++
Sbjct: 89 ATAEKKKQEYEKTILAYNKKL 109
>gi|197692183|dbj|BAG70055.1| mitochondrial transcription factor A [Homo sapiens]
gi|197692433|dbj|BAG70180.1| mitochondrial transcription factor A [Homo sapiens]
gi|311349644|gb|ADP92007.1| mitochondrial transcription factor A [Homo sapiens]
Length = 246
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ +++ + + +++ E E+++++L+ K KKE L KPK P
Sbjct: 111 KEEISRFKEQLTPSQIMSLEK------EIMDKHLKRKAMTK------KKELTLLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY ++ +ER D+ E K E WKN+++ +K Y + AK+++ +Y+ EM+
Sbjct: 159 RSAYNVYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 216
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 217 SWEEQMIEV 225
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPEA F E + +WK +S +EK ++E +A+K Y Q M
Sbjct: 16 YAFFVQTCREEHKKKNPEAPVNFAEFSKKCPERWKIMSGKEKSKFDEMAKADKVRYDQEM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+ ++ K K+KDP PK P + +F
Sbjct: 76 -KDYGPAKGGK---------------------------------KKKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N ++ +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNLGISIGDVAKKLGEMWNNLNDSKKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|388857490|emb|CCF48846.1| uncharacterized protein [Ustilago hordei]
Length = 292
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 207 LGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQY 266
+GA+W ++ + K YE +++ EKE Y + +A+ + L ++ K++ A
Sbjct: 151 VGAEWAQLAPQLKARYEAQHEQEKEQYERALAEWK-----AALSPDDIKRQNAY------ 199
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWK 326
+ K K +DP KPK P +A+F F ++ RA N+ E +K GE WK
Sbjct: 200 --IASQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRARETVI-PNITEFSKRGGERWK 256
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
M EQK PYE+ A E+Y ++E Y
Sbjct: 257 QMAPEQKAPYEQRALHALEQYKRDLEIY 284
>gi|255566393|ref|XP_002524182.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223536551|gb|EEF38197.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 155
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KD PK P +A+F+F E R DNK V V K GE+WK+++E K PY E A
Sbjct: 43 KDTDAPKRPASAFFIFMDEFRKYFKEKYPDNKAVSAVGKAGGEKWKSLSETDKAPYLEKA 102
Query: 341 KKNKEKYNEEMEAYKRR 357
K K +Y + +EAYK++
Sbjct: 103 LKRKAEYEKVLEAYKQQ 119
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP PK ++AY F++E+R + +N V +V KI GE WK ++++Q+ PYE A
Sbjct: 21 KDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAA 80
Query: 342 KNKEKYNEEMEAY 354
+K++Y +E +AY
Sbjct: 81 ADKKRYEDEKQAY 93
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 162 EQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP 221
E+ R KK KR Y+ + +Q ++ENP F ++ ILG +WK +S +++ P
Sbjct: 15 EKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAP 74
Query: 222 YEEKYQAEKEAY 233
YE K A+K+ Y
Sbjct: 75 YEAKAAADKKRY 86
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + K E K+NP F E + +WK +S +EK +E+ + +K Y Q M
Sbjct: 16 YAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFEDLAKQDKARYDQEM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ K K++KDP P+ P + +F
Sbjct: 76 ---------------------------------MHYNPGKKGRKQKKDPNAPRRPPSGFF 102
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF +E+R + A N + +VAK G W N+++ +K+P+ A K K+KY ++M Y+
Sbjct: 103 LFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQPFLSNADKLKDKYQKDMAFYR 162
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEEIA 340
DP KPK ++AY F R N V E +K E WK M+ ++K +E++A
Sbjct: 5 DPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFEDLA 64
Query: 341 KKNKEKYNEEMEAY 354
K++K +Y++EM Y
Sbjct: 65 KQDKARYDQEMMHY 78
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP + L+C +Q K +NP ++ LG W N+S EK+P+ K+ Y
Sbjct: 95 RRPPSGFFLFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQPFLSNADKLKDKY 154
Query: 234 LQVMAKER 241
+ MA R
Sbjct: 155 QKDMAFYR 162
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N++ EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKY 153
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRP 335
K +K+KDP PK ++AY F++E R + A+N + +V K+ GE+WK +T ++K P
Sbjct: 9 KATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTADEKVP 68
Query: 336 YEEIAKKNKEKYNEEMEAYKRR 357
YE A+ +K++Y +E Y +R
Sbjct: 69 YENKAETDKKRYEKEKAEYAKR 90
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KR Y+ + + + + ENP F ++ +LG KWK ++A+EK PYE
Sbjct: 12 RKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTADEKVPYEN 71
Query: 225 KYQAEKEAY 233
K + +K+ Y
Sbjct: 72 KAETDKKRY 80
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKAMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N V +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISVGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISVGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKY 153
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK + A+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMYAKEKGKFEDIAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F++E+R ++ +N + +V K+ G+ WK + E+Q+ PYE+
Sbjct: 16 KKKKDPNAPKRGLSAYMFFANEQRESVREENPGISFGQVGKVLGDRWKALNEKQREPYEK 75
Query: 339 IAKKNKEKYNEEMEAY 354
A+ +K++Y +E Y
Sbjct: 76 KAQADKKRYEDEKAKY 91
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 166 KKKGCAERKRPSP--------PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAE 217
K KG E+K+ P Y+ + +Q ++ENP F ++ +LG +WK ++ +
Sbjct: 9 KTKGRGEKKKKDPNAPKRGLSAYMFFANEQRESVREENPGISFGQVGKVLGDRWKALNEK 68
Query: 218 EKKPYEEKYQAEKEAY 233
+++PYE+K QA+K+ Y
Sbjct: 69 QREPYEKKAQADKKRY 84
>gi|156097921|ref|XP_001614993.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148803867|gb|EDL45266.1| high mobility group protein, putative [Plasmodium vivax]
Length = 171
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DPL PK ++AY + ++R L+ + K+V +V K+ GE W ++ QK PYE+ A
Sbjct: 92 DPLAPKRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGQLSAAQKTPYEKKA 151
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+ +K +Y++E+E Y++ KE
Sbjct: 152 QLDKVRYSKEIEEYRKTKKE 171
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKE 231
KR Y+ + KD+ E KE PE + ++ ++G W +SA +K PYE+K Q +K
Sbjct: 97 KRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGQLSAAQKTPYEKKAQLDKV 156
Query: 232 AY 233
Y
Sbjct: 157 RY 158
>gi|47115243|emb|CAG28581.1| TFAM [Homo sapiens]
Length = 246
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ +++ + + +++ E E+++++L+ K KKE L KPK P
Sbjct: 111 KEEISRFKEQLTPSQIMSLEK------EIMDKHLKRKAMTK------KKELTLLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY ++ +ER D+ E K E WKN+++ +K Y + AK+++ +Y+ EM+
Sbjct: 159 RSAYNVYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 216
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 217 SWEEQMIEV 225
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQ 332
K+ K + +KDP PK ++AY F++E+R + +N + +V K+ GE WK + ++Q
Sbjct: 12 KDGGKKRTKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQ 71
Query: 333 KRPYEEIAKKNKEKYNEEMEAY 354
+ PYE A +K++Y +E +AY
Sbjct: 72 RAPYEAKAAADKKRYEDEKQAY 93
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 156 QCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVS 215
+ KD + R KK KR Y+ + +Q ++ENP F ++ +LG +WK ++
Sbjct: 9 RGAKDGGKKRTKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALN 68
Query: 216 AEEKKPYEEKYQAEKEAY 233
+++ PYE K A+K+ Y
Sbjct: 69 DKQRAPYEAKAAADKKRY 86
>gi|345323380|ref|XP_001507921.2| PREDICTED: transcription factor A, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 320
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 18/189 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + + + K++NPE + E+ + W+ + A EKK YEE + AY
Sbjct: 118 KQPLSAYLRFVVQRQSMYKQQNPEIKMTEVIKKIAQAWRELPAAEKKVYEEAANEDWMAY 177
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ +AK + S + QK ++ + L+ K E KE ++ +PK P
Sbjct: 178 KEELAKFKATSVPL--------QKVPLKTHSKELKSKSERKKELRRLG------RPKRPH 223
Query: 294 TAYFLFSSERRAALLADNKNVL-EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY +F ER L N+L + KI E W N+ QK+ Y ++A+ +K +Y EM
Sbjct: 224 SAYNIFVVER---LQETAGNLLKDKIKILSEAWNNLPSSQKQAYIQLAEDDKIRYENEMR 280
Query: 353 AYKRRMKEL 361
+++ +M ++
Sbjct: 281 SWESQMVDV 289
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 288 KPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
+PK P++AY F +R++ N + EV K + W+ + +K+ YEE A ++
Sbjct: 116 RPKQPLSAYLRFVVQRQSMYKQQNPEIKMTEVIKKIAQAWRELPAAEKKVYEEAANEDWM 175
Query: 346 KYNEEMEAYK 355
Y EE+ +K
Sbjct: 176 AYKEELAKFK 185
>gi|159478601|ref|XP_001697391.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274549|gb|EDP00331.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 99
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P+ AY F E R + ADN +V ++ + GE WK ++ K+ ++++A K
Sbjct: 18 DPNAPKKPMGAYMWFCKEMREQVKADNPEFSVTDIGRRLGELWKECEDDDKKKFQDLADK 77
Query: 343 NKEKYNEEMEAYKRRMKE 360
+KE+YN+E AY+++ KE
Sbjct: 78 DKERYNKENAAYQKKEKE 95
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 153
>gi|332808386|ref|XP_513298.3| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4 [Pan
troglodytes]
Length = 186
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 36/164 (21%)
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
N FKE + KW+++S EK YE L + K R + E M + +
Sbjct: 33 NTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKLDKARYQEEMMNYVGKRK 83
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN- 313
K++ +DP P+ P +++ LF + A L +N N
Sbjct: 84 KRRK-------------------------RDPQAPRRPPSSFLLFCQDHYAQLKRENPNW 118
Query: 314 -VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
V++VAK TG+ W +T+ +K PYE+ A + KY EE+E Y++
Sbjct: 119 SVVQVAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRK 162
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W V+ EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTVTDLEKHPYEQRAALLRAKY 153
Query: 234 LQVMAKERRESEAMK 248
+ + R++ A K
Sbjct: 154 FEELELYRKQCNARK 168
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 35/182 (19%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
++ C+++ ++ K + +F E + +WK +SA+EK +E+ + +K Y
Sbjct: 19 FVQTCREE-HKKKHSDASVKFSEYSKKCSERWKTMSAKEKGTFEDMAKVDKARY------ 71
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
E K KT Y+ K+E K K KDP PK + +FLF
Sbjct: 72 -------------ERKMKT-------YIPPKEETKK------KFKDPNAPKRAPSTFFLF 105
Query: 300 SSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
SE R + ++ + +VAK GE W N K+PYE+ A + KEKY +++ AY+ +
Sbjct: 106 CSEYRPKIKGEHPGLSTGDVAKKLGEMWNNTAAGDKQPYEKKAAELKEKYEKDIAAYRAK 165
Query: 358 MK 359
K
Sbjct: 166 GK 167
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + L+C + + K E+P ++ LG W N +A +K+PYE+K KE Y
Sbjct: 96 KRAPSTFFLFCSEYRPKIKGEHPGLSTGDVAKKLGEMWNNTAAGDKQPYEKKAAELKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP PK ++AY F++E+R + +N V +V KI GE WK ++++Q+ PYE A
Sbjct: 21 KDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAA 80
Query: 342 KNKEKYNEEMEAY 354
+K++Y +E +AY
Sbjct: 81 ADKKRYEDEKQAY 93
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 162 EQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP 221
E+ R KK KR Y+ + +Q ++ENP F ++ ILG +WK +S +++ P
Sbjct: 15 EKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAP 74
Query: 222 YEEKYQAEKEAY 233
YE K A+K+ Y
Sbjct: 75 YEAKAAADKKRY 86
>gi|355723900|gb|AES08043.1| transcription factor A, mitochondrial [Mustela putorius furo]
Length = 244
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP A+ E+ + W+ + EKK YE+ Y+A+ +AY
Sbjct: 51 KKPLTSYVRFSKEQLPIFKAQNPAAKNSELIRKIAQLWRELPDSEKKIYEDAYRADWQAY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
E + ++E+ + LE+ +Q K+ K K ++ KPK P
Sbjct: 111 ----------KEEINRIQEQLTPSQIVS-LEKEIQQKRLKKKALIKKRELTMLGKPKRPR 159
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+AY +F +ER D + +++ K E WKN++ QK+ Y ++A +K +Y EM++
Sbjct: 160 SAYNIFIAERFQE-AKDGTSQVKL-KTINENWKNLSSSQKQVYIQLANDDKIRYYNEMKS 217
Query: 354 YKRRMKEL 361
++ +M E+
Sbjct: 218 WEEQMMEV 225
>gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K G++WK++++ +K PY A
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 92
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+K K +Y + ++AY ++++E
Sbjct: 93 EKRKVEYEKNIKAYNKKLEE 112
>gi|296471997|tpg|DAA14112.1| TPA: transcription factor A, mitochondrial precursor [Bos taurus]
gi|440896556|gb|ELR48454.1| Transcription factor A, mitochondrial [Bos grunniens mutus]
Length = 246
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ + Y
Sbjct: 51 KKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
E + ++E+ + L ++ +Q + K+ K+E L KPK P
Sbjct: 111 ----------KEEINRIQEQLTPSQMVSLEKEIMQ--KRLKKKALIKKRELTMLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY +F +ER D + +++ I E WKN++ QK+ Y ++AK +K +Y EM+
Sbjct: 159 RSAYNIFIAERFQE-ARDGTSQVKLKAIN-ENWKNLSNSQKQVYIQLAKDDKIRYYNEMK 216
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 217 SWEEQMMEV 225
>gi|260802712|ref|XP_002596236.1| hypothetical protein BRAFLDRAFT_117987 [Branchiostoma floridae]
gi|229281490|gb|EEN52248.1| hypothetical protein BRAFLDRAFT_117987 [Branchiostoma floridae]
Length = 281
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP+ YI + + + +NP A K+I I + WK +S EK+PY AE+E Y
Sbjct: 51 KRPANAYIRYVNQKMPTVRSQNPGAGPKQIVRICASLWKQLSDTEKQPYINDAAAEREKY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL----KP 289
+SE E+ K +E +Y Q + + + ++ ++ L KP
Sbjct: 111 ---------KSEY-----EDFKSDFTIEEWGEY-QDSRRQRRRQLQNRRRREELQQLGKP 155
Query: 290 KHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
K PV Y LF E L + N+ + K +W N+ E +K+ Y A K KEKY
Sbjct: 156 KQPVHGYGLFVKE---MLSGSSGNMAQQMKDMKGQWINLPETEKQKYMSEANKAKEKYEA 212
Query: 350 EMEAYKRRM 358
EM+A++++M
Sbjct: 213 EMQAWEKKM 221
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAK 341
K P PK P AY + +++ + + N ++ +I WK +++ +K+PY A
Sbjct: 45 KFPTPPKRPANAYIRYVNQKMPTVRSQNPGAGPKQIVRICASLWKQLSDTEKQPYINDAA 104
Query: 342 KNKEKYNEEMEAYK 355
+EKY E E +K
Sbjct: 105 AEREKYKSEYEDFK 118
>gi|432895946|ref|XP_004076239.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 206
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +SA+EK +E+ + +K Y
Sbjct: 18 FVQTCRE---EHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFEDMARQDKVRY---- 70
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E M + + K KK KDP PK P +A+F
Sbjct: 71 -----DREMMSYVPA-----------------------KGAKTKKFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + ++ + +VAK GE W + + E K+PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCSEFRPKVKGESPGLTIGDVAKRLGEMWNSTSAEDKQPYEKKAAKLKEKYGKDIAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 AKGK 166
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C + + K E+P ++ LG W + SAE+K+PYE+K KE Y
Sbjct: 95 KRPPSAFFIFCSEFRPKVKGESPGLTIGDVAKRLGEMWNSTSAEDKQPYEKKAAKLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 GKDIAAYR 162
>gi|291410693|ref|XP_002721624.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 215
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRTPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MKNYIPPKGE------KKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ RA + + + +VAK GE W E K+PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRAKVKGETPGLTIGDVAKKLGEMWNGTCAEDKQPYEKKAAKLKEKYEKDIAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 AKGK 166
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D + K E P ++ LG W AE+K+PYE+K KE Y
Sbjct: 95 KRPPSAFFIFCADFRAKVKGETPGLTIGDVAKKLGEMWNGTCAEDKQPYEKKAAKLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 EKDIAAYR 162
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 270 KQEADKENKKPKK--EKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEW 325
K +A K K KK +KDP PK ++AY F++E+R + +N + +V K+ GE W
Sbjct: 3 KADAGKRGKAVKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERW 62
Query: 326 KNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
K + E+Q+ PYE A +K++Y +E +AY
Sbjct: 63 KALNEKQRAPYEAKAAADKKRYEDEKQAY 91
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 164 DRKKKGCAERKR----PSPP------YILWCKDQWNEAKKENPEAEFKEITNILGAKWKN 213
D K+G A +KR P+ P Y+ + +Q ++ENP F ++ +LG +WK
Sbjct: 5 DAGKRGKAVKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKA 64
Query: 214 VSAEEKKPYEEKYQAEKEAY 233
++ +++ PYE K A+K+ Y
Sbjct: 65 LNEKQRAPYEAKAAADKKRY 84
>gi|397482786|ref|XP_003812597.1| PREDICTED: high mobility group protein B4 [Pan paniscus]
Length = 177
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 36/164 (21%)
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
N FKE + KW+++S EK YE L + K R + E M + +
Sbjct: 33 NTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKLDKARYQEEMMNYVGKRK 83
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN- 313
K++ +DP P+ P +++ LF + A L +N N
Sbjct: 84 KRRK-------------------------RDPQAPRRPPSSFLLFCQDHYAQLKRENPNW 118
Query: 314 -VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
V++VAK TG+ W +T+ +K PYE+ A + KY EE+E Y++
Sbjct: 119 SVVQVAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRK 162
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W V+ EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTVTDLEKHPYEQRAALLRAKY 153
Query: 234 LQVMAKERRESEAMK 248
+ + R++ A K
Sbjct: 154 FEELELYRKQCNARK 168
>gi|357506009|ref|XP_003623293.1| HMG1/2-like protein [Medicago truncatula]
gi|355498308|gb|AES79511.1| HMG1/2-like protein [Medicago truncatula]
gi|388511215|gb|AFK43669.1| unknown [Medicago truncatula]
Length = 170
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F + R A+N NV V K GE+WK++T+ +K PYE A
Sbjct: 47 DPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAA 106
Query: 342 KNKEKYNEEMEAY 354
K K +Y + M AY
Sbjct: 107 KRKVEYEKLMNAY 119
>gi|296199401|ref|XP_002747150.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 209
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 31/179 (17%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+E E + +K Y + M
Sbjct: 16 YAFFVQTCCEEPKKKHPDASASFSEFSKKCSERWKTMSAKEGGKSEAMAKTDKAHYKREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RR ++ Y+ K E K K KDP PK +A+F
Sbjct: 76 KAGRR--------------------MKTYIPPKGETKK------KFKDPNAPKRFPSAFF 109
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
LF SE + ++ V +V K+ GE W N K+PYE+ A K ++KY E+ AY
Sbjct: 110 LFCSECYPKIKGEHPGLSVGDVKKL-GEMWSNTAAGDKQPYEKKAAKLRKKYGRELAAY 167
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 273 ADKENKKPKKE-----KDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEE 324
ADK K+P K+ KDP KPK P +A+F+F E R +N NV V K GE+
Sbjct: 34 ADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEK 93
Query: 325 WKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
WK+++ +K PYE A K K +Y + M AY
Sbjct: 94 WKSLSHAEKAPYEAKAAKRKAEYEKLMRAY 123
>gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High mobility group B protein 2; AltName: Full=High
mobility group protein B 1; Short=AtHMGbeta1; Short=HMG
beta 1; AltName: Full=Nucleosome/chromatin assembly
factor group D 02; Short=Nucleosome/chromatin assembly
factor group D 2
gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein [Arabidopsis thaliana]
gi|2832359|emb|CAA74401.1| HMG protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis thaliana]
gi|21536964|gb|AAM61305.1| unknown [Arabidopsis thaliana]
gi|26452113|dbj|BAC43146.1| unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein [Arabidopsis thaliana]
gi|332191885|gb|AEE30006.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K G++WK++++ +K PY A
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 92
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+K K +Y + ++AY ++++E
Sbjct: 93 EKRKVEYEKNIKAYNKKLEE 112
>gi|357640485|gb|AET87126.1| high mobility group B2 protein [Brassica napus]
Length = 145
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F + R D NK+V V K GE+WK++++ +K P+ A
Sbjct: 34 DPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKAD 93
Query: 342 KNKEKYNEEMEAYKRRM 358
K K +Y + M+AY +++
Sbjct: 94 KRKVEYEKTMKAYNKKL 110
>gi|145323960|ref|NP_001077569.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|332191887|gb|AEE30008.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 143
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K G++WK++++ +K PY A
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 92
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+K K +Y + ++AY ++++E
Sbjct: 93 EKRKVEYEKNIKAYNKKLEE 112
>gi|351722065|ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max]
gi|255628875|gb|ACU14782.1| unknown [Glycine max]
Length = 209
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP PK P TA+F+F + R + D+K+V V K GE+W++MT+E+K+PY +
Sbjct: 99 DPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 342 KNKEKYNEEMEAY 354
+ KE+Y + ME+Y
Sbjct: 159 ELKEEYEKAMESY 171
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA-EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
KRP + ++ D K+ NP++ + K + G KW++++ EEKKPY +K KE
Sbjct: 104 KRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVAELKEE 163
Query: 233 YLQVM 237
Y + M
Sbjct: 164 YEKAM 168
>gi|255574381|ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223532493|gb|EEF34283.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 171
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVA---KITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R +N +V VA K G +WK+M+ +K PYE A
Sbjct: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAA 110
Query: 342 KNKEKYNEEMEAYKRR 357
K K++Y + M AY ++
Sbjct: 111 KKKDEYGKLMNAYNKK 126
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPE-AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
KRP + ++ ++ KKENP + GAKWK++S+ EK PYE K +K+
Sbjct: 56 KRPPSAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAAKKKDE 115
Query: 233 YLQVMAKERRESEAMKLLEEEHKQKTAMELLEQ 265
Y ++M ++ E+ EE ++ E+ ++
Sbjct: 116 YGKLMNAYNKKQESTADDGEEESDRSKSEVNDE 148
>gi|355754126|gb|EHH58091.1| BRG1-associated factor 57 [Macaca fascicularis]
Length = 393
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ME E Y+ + D P D
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF 297
KH TA F
Sbjct: 169 SMKHTATARF 178
>gi|407971018|ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
gi|255625939|gb|ACU13314.1| unknown [Glycine max]
Length = 166
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEV---AKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R A+N NV V K GE+WK+++ +K PYE A
Sbjct: 49 DPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAA 108
Query: 342 KNKEKYNEEMEAYKRR 357
K K +Y + ++AY ++
Sbjct: 109 KRKAEYEKLIKAYDKK 124
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E K++P+A F E + +WK +SA+EK +E+ + +K Y
Sbjct: 16 YAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKVDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAVDDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N + ++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAVDDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MKNYIPPKGE------KKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F ++ RA + + + +VAK GE W E K+PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCADFRAKVKGETPGPTIGDVAKKLGEMWNGTCAEDKQPYEKKAAKLKEKYEKDIAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 AKGK 166
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D + K E P ++ LG W AE+K+PYE+K KE Y
Sbjct: 95 KRPPSAFFIFCADFRAKVKGETPGPTIGDVAKKLGEMWNGTCAEDKQPYEKKAAKLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 EKDIAAYR 162
>gi|224052252|ref|XP_002187547.1| PREDICTED: transcription factor A, mitochondrial [Taeniopygia
guttata]
Length = 277
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y + D +++NPE E+ L W+ + A +K+ YEE + + + Y
Sbjct: 59 KRPLTAYFRFVMDNRPAFREKNPEVSNTELIKKLAGAWRELPASQKQVYEEALKTDWKRY 118
Query: 234 LQVMAKERRE---SEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KP 289
+ MA + + ++A L EE KQ A + + + K+E L KP
Sbjct: 119 GEQMAAYKAQLTPAQAAALKEERRKQ---------------LARRRSIRAKRELSLLGKP 163
Query: 290 KHPVTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKY 347
K + + +F SE +++ VAK+ + WK M+ QK+PY ++A+ +K +Y
Sbjct: 164 KRARSGFNIFLSEN----FQESEGSSPVAKLKKLFDTWKKMSASQKQPYLQLAEDDKVRY 219
Query: 348 NEEMEAYKRRMKEL 361
EM++++ +M EL
Sbjct: 220 ENEMKSWEAKMIEL 233
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV 314
+Q+ A LL+ + E + +PK P+TAYF F + R A N V
Sbjct: 24 RQRGAGILLDGAAVCRAGGAAERCLSRGTSSSQRPKRPLTAYFRFVMDNRPAFREKNPEV 83
Query: 315 --LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
E+ K W+ + QK+ YEE K + ++Y E+M AYK
Sbjct: 84 SNTELIKKLAGAWRELPASQKQVYEEALKTDWKRYGEQMAAYK 126
>gi|156151422|ref|NP_001029188.2| transcription factor A, mitochondrial precursor [Bos taurus]
gi|121956669|sp|Q0II87.1|TFAM_BOVIN RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|113911921|gb|AAI22755.1| Transcription factor A, mitochondrial [Bos taurus]
Length = 246
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ + Y
Sbjct: 51 KKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAKLWRELPDSEKKIYEDAYRADWQVY 110
Query: 234 LQVMAK--ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
+ + + E+ M LE+E QK + K++A + K+E L KPK
Sbjct: 111 KEEINRIQEQLTPSQMVSLEKEIMQK----------RLKKKALIK----KRELTMLGKPK 156
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AY +F +ER D + +++ I E WKN++ QK+ Y ++AK +K +Y E
Sbjct: 157 RPRSAYNIFIAERFQE-ARDGTSQVKLKAIN-ENWKNLSNSQKQVYIQLAKDDKIRYYNE 214
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 215 MKSWEEQMMEV 225
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ + +
Sbjct: 18 FVQTCRE---EHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFED---------MAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKARYERE-----------------MKNYIPPKGE------KKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + + + +VAK GE W ++ E+K+PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPYEKKAAKLKEKYEKDIAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 SKGK 166
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C + + K+E P ++ LG W +S+EEK+PYE+K KE Y
Sbjct: 95 KRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPYEKKAAKLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 EKDIAAYR 162
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ + +
Sbjct: 18 FVQTCRE---EHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFED---------MAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKARYERE-----------------MKNYIPPKGE------KKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + + + +VAK GE W ++ E+K+PYE+ A K KEKY +++ AY+
Sbjct: 103 IFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPYEKKAAKLKEKYEKDIAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 SKGK 166
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C + + K+E P ++ LG W +S+EEK+PYE+K KE Y
Sbjct: 95 KRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPYEKKAAKLKEKY 154
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 155 EKDIAAYR 162
>gi|313217945|emb|CBY41316.1| unnamed protein product [Oikopleura dioica]
gi|313245828|emb|CBY34818.1| unnamed protein product [Oikopleura dioica]
Length = 200
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERR---AALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP PK P TA+FLFS+ R A L + V +VAK GE WK ++ E+K + +IAK
Sbjct: 92 DPNAPKRPATAFFLFSTANREKAKAQLEEGAKVGDVAKKLGEMWKLVSAEEKENFAKIAK 151
Query: 342 KNKEKYNEEMEAYK 355
++K KY++ ME Y+
Sbjct: 152 ESKAKYDKAMEEYR 165
>gi|301763549|ref|XP_002917185.1| PREDICTED: high mobility group protein B4-like [Ailuropoda
melanoleuca]
Length = 193
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 38/181 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 18 YIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + ++ K++ +DP P+ P +++
Sbjct: 69 DKARYQEEMMNYVGKKKKRRK-------------------------RDPQAPRRPPSSFL 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N N V++VAK +G+ W T+ +K+PYE+ A + KY EE+E Y+
Sbjct: 104 LFCQDHYAQLKRENPNWSVVQVAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYR 163
Query: 356 R 356
+
Sbjct: 164 K 164
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
+RP ++L+C+D + + K+ENP ++ G W + EK+PYE+ KY
Sbjct: 96 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKASGKMWSATTDAEKQPYEQRAALLRAKY 155
Query: 227 QAEKEAY 233
Q E E Y
Sbjct: 156 QEELEIY 162
>gi|53749690|ref|NP_001005436.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
gi|49257937|gb|AAH74534.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
gi|89266950|emb|CAJ81375.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
gi|89268721|emb|CAJ82380.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus (Silurana)
tropicalis]
Length = 435
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + M+ E Y+ + D P D
Sbjct: 132 TYHNSPAYLAYINAKSRAEAALEEESRQRQSRMDKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH A F L S +++ D ++V+ A++
Sbjct: 187 SMKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N++ EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKY 153
>gi|156837652|ref|XP_001642846.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113421|gb|EDO14988.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 273 ADKENKK--PKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNM 328
A +E+KK +++KDP PK ++AY F++E R + A+N +V +V +I GE+WK +
Sbjct: 3 APRESKKRTTRRKKDPNAPKRALSAYMFFANETRDIVRAENPDVSFGQVGRILGEKWKAL 62
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAY 354
T E K P+E A+ +K++Y E E Y
Sbjct: 63 TPEDKVPFEAKAEADKKRYESEKELY 88
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F ++ ILG KWK ++ E+K
Sbjct: 9 KRTTRRKKDPNAPKRALSAYMFFANETRDIVRAENPDVSFGQVGRILGEKWKALTPEDKV 68
Query: 221 PYEEKYQAEKEAY 233
P+E K +A+K+ Y
Sbjct: 69 PFEAKAEADKKRY 81
>gi|123456225|ref|XP_001315850.1| HMG box family protein [Trichomonas vaginalis G3]
gi|121898539|gb|EAY03627.1| HMG box family protein [Trichomonas vaginalis G3]
Length = 100
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 176 PSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK 230
P+ PYIL+CK++ + K +NP F +I LG WKN+S EEKKPY EK +AEK
Sbjct: 2 PASPYILFCKEKRPQVKADNPGIAFGDIAKKLGEMWKNLSEEEKKPYIEKAEAEK 56
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P + Y LF E+R + ADN + ++AK GE WKN++EE+K+PY E A+ K ++ +
Sbjct: 2 PASPYILFCKEKRPQVKADNPGIAFGDIAKKLGEMWKNLSEEEKKPYIEKAEAEKAEHKD 61
Query: 350 E 350
E
Sbjct: 62 E 62
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E+R + +N + +V K+ GE WK + E+Q+ PYEE A K
Sbjct: 20 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRGPYEESAAK 79
Query: 343 NKEKYNEEMEAY 354
+K++Y EE Y
Sbjct: 80 DKKRYEEEKANY 91
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q + ++ENP F ++ +LG +WK ++ +++ PYEE +K+ Y
Sbjct: 25 KRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRGPYEESAAKDKKRY 84
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F++E R + +N + +V K+ GE WK +++ +RPYEE
Sbjct: 17 RKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDTDRRPYEE 76
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E +Y
Sbjct: 77 KAAADKKRYEDEKASY 92
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAE 217
K K +RKKK KR Y+ + + ++ ++ENP F ++ +LG +WK +S
Sbjct: 10 TKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDT 69
Query: 218 EKKPYEEKYQAEKEAY 233
+++PYEEK A+K+ Y
Sbjct: 70 DRRPYEEKAAADKKRY 85
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +S++EK +EE + +K Y + M
Sbjct: 19 FVQTCRE---EHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + +K K+KDP PK P +A+F
Sbjct: 76 --------------------------------KNYVPPKGEKKGKKKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + D+ + + AK GE W + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKSK 167
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPE F E + +WK S +EK ++E +A+K Y
Sbjct: 19 FVQTCRE---EHKKKNPEVPVNFAEFSKKCSERWKPTSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 153
>gi|195977121|gb|ACG63669.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
Length = 227
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 33/183 (18%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
++ C+ + E K + F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 19 FVQTCRGEEREKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY------ 72
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
E + KT Y+ K E KK KDP PK P +A+FLF
Sbjct: 73 -------------EREMKT-------YIPPKGETK------KKFKDPNAPKRPPSAFFLF 106
Query: 300 SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
SE R + ++ + +VAK GE W N K+P E+ A K +EK +++ AY+ +
Sbjct: 107 CSEYRPKIKGEHHLSTGDVAKKLGEMWSNPAAGDKQPEEKKAAKLEEKDKKDIAAYRAKG 166
Query: 359 KEL 361
K +
Sbjct: 167 KPV 169
>gi|19698568|gb|AAL93211.1|AF487782_1 Baf57 [Xenopus laevis]
Length = 423
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 231 -----EAYLQVMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEK 284
AYL ++ + R A LEEE +Q+ + M+ E Y+ + D P
Sbjct: 132 TYHNSPAYLAYISAKSRAEAA---LEEESRQRQSRMDKGEPYMSIQPAED-----PDDYD 183
Query: 285 DPLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
D KH A F L S +++ D ++V+ A++
Sbjct: 184 DGFSMKHTAAARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|71986275|ref|NP_001022600.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
gi|373219054|emb|CCD83371.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
Length = 233
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 34/189 (17%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
+ PY + K + E KK+ P + EI+ KWK + +EK+ + E A+K+A
Sbjct: 49 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE--LAQKDA-- 104
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
ER ++E E D K+ + +KDP PK ++
Sbjct: 105 -----ERYQAEVAAYGGE---------------------DAMRKRKRAKKDPHAPKRALS 138
Query: 295 AYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
A+F +S ++R + A + + V +VA+ G+ WK + +E K YE+ A+ +K++Y +EM
Sbjct: 139 AFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMR 198
Query: 353 AYKRRMKEL 361
YK M+++
Sbjct: 199 NYKAEMQKM 207
>gi|116778852|gb|ABK21026.1| unknown [Picea sitchensis]
gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis]
gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis]
gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis]
gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis]
gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis]
gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis]
gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis]
gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis]
gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis]
Length = 157
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 244 SEAMKLLEEE--HKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSS 301
S +K +EE+ K+KTA + E + +QE K K KDP KPK P +A+F+F
Sbjct: 11 SSTLKKVEEKPIGKRKTAAK--ESKVSSRQE----KKGRKAAKDPNKPKRPASAFFVFME 64
Query: 302 ERRAALLADNKNVLEV---AKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ R N NV V K G++WK+M+E K PY A K K +Y + M AY
Sbjct: 65 DFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNMAAY 120
>gi|157822723|ref|NP_001102933.1| high mobility group protein B4 [Rattus norvegicus]
gi|149023997|gb|EDL80494.1| rCG31445 [Rattus norvegicus]
Length = 181
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DPL P+ P +++ LFS + A L +N N V++VAK G+ W +T+ KRPYE+ A
Sbjct: 89 DPLAPRKPPSSFLLFSLDHFAKLKQENPNWTVVQVAKAAGKMWSMITDVDKRPYEQKAAI 148
Query: 343 NKEKYNEEMEAY 354
+ KY +E EAY
Sbjct: 149 MRAKYFQEREAY 160
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 171 AERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE------ 224
A RK PS ++L+ D + + K+ENP ++ G W ++ +K+PYE+
Sbjct: 92 APRKPPSS-FLLFSLDHFAKLKQENPNWTVVQVAKAAGKMWSMITDVDKRPYEQKAAIMR 150
Query: 225 -KYQAEKEAYL 234
KY E+EAYL
Sbjct: 151 AKYFQEREAYL 161
>gi|148230056|ref|NP_001079374.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Xenopus laevis]
gi|54038158|gb|AAH84249.1| Smarce1 protein [Xenopus laevis]
Length = 423
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 131
Query: 231 -----EAYLQVMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEK 284
AYL ++ + R A LEEE +Q+ + M+ E Y+ + D P
Sbjct: 132 TYHNSPAYLAYISAKSRAEAA---LEEESRQRQSRMDKGEPYMSIQPAED-----PDDYD 183
Query: 285 DPLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
D KH A F L S +++ D ++V+ A++
Sbjct: 184 DGFSMKHTAAARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|442749551|gb|JAA66935.1| Putative transcription factor a mitochondrial [Ixodes ricinus]
Length = 262
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 27/194 (13%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
KRP YIL+ D ++NP + E+ L KW KK YE E +
Sbjct: 59 KRPPSGYILFLNDTRKTVMRQNPALKPTEVVKTLAEKWNMADEITKKKYETLSRERMEAF 118
Query: 227 QAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDP 286
EKEAY L + KQ A L++ L+ ++ E K
Sbjct: 119 AKEKEAY-------------TSRLTPQQKQALAELSLDKKLRVSKKKLNEKLKELD---- 161
Query: 287 LKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
+PK TA+ LFSS R L +K E+ G WK + E++K+ Y + A+ ++++
Sbjct: 162 -RPKGARTAFVLFSSAMRKQL--QDKTPKEMMTHLGTLWKQLPEDKKQHYVKQAEGDRQR 218
Query: 347 YNEEMEAYKRRMKE 360
Y EM+A+ +R+++
Sbjct: 219 YTREMQAWTKRLED 232
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK P + Y LF ++ R ++ N + EV K E+W E K+ YE ++++
Sbjct: 55 PPAPKRPPSGYILFLNDTRKTVMRQNPALKPTEVVKTLAEKWNMADEITKKKYETLSRER 114
Query: 344 KEKYNEEMEAYKRRM 358
E + +E EAY R+
Sbjct: 115 MEAFAKEKEAYTSRL 129
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E+R + +N + +V KI GE WK +T++Q+ PYE A
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKILGERWKALTDKQRAPYEAKAAA 80
Query: 343 NKEKYNEEMEAY 354
+K++Y +E +AY
Sbjct: 81 DKKRYEDEKQAY 92
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q + ++ENP F ++ ILG +WK ++ +++ PYE K A+K+ Y
Sbjct: 26 KRGLSAYMFFANEQRDNVREENPGISFGQVGKILGERWKALTDKQRAPYEAKAAADKKRY 85
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPY 336
K + +KDP PK ++AY F++E+R + +N + +V KI GE WK + ++Q+ PY
Sbjct: 16 KKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAPY 75
Query: 337 EEIAKKNKEKYNEEMEAY 354
E A +K++Y +E +AY
Sbjct: 76 EAKAAADKKRYEDEKQAY 93
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 162 EQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKP 221
E+ R KK KR Y+ + +Q ++ENP F ++ ILG +WK ++ +++ P
Sbjct: 15 EKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAP 74
Query: 222 YEEKYQAEKEAY 233
YE K A+K+ Y
Sbjct: 75 YEAKAAADKKRY 86
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P + +FLF SE R + + N + +VAK GE W N+++ +K+PY A K
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 147
Query: 343 NKEKYNEEMEAYKRRMK 359
KEKY +++ YK + K
Sbjct: 148 LKEKYEKDVADYKSKGK 164
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 93 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKY 152
>gi|410901761|ref|XP_003964364.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Takifugu rubripes]
Length = 462
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W+++S EEK+ Y +Y+AEK
Sbjct: 70 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQDYLNEYEAEKIEYNDSLK 129
Query: 231 -----EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKD 285
AYL + + R AM+ EE ++++ M+ E Y+ + D P D
Sbjct: 130 AYHNSPAYLAYVNAKNRAEAAME--EESRQRQSRMDKGEPYMSIQPAED-----PDDYDD 182
Query: 286 PLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH + F L S ++ D ++V+ A++
Sbjct: 183 GFSVKHTAASRFQRNHRLISDILSEIVVPDVRSVVTTARM 222
>gi|281349442|gb|EFB25026.1| hypothetical protein PANDA_005395 [Ailuropoda melanoleuca]
Length = 181
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 38/181 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 16 YIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 66
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + ++ K++ +DP P+ P +++
Sbjct: 67 DKARYQEEMMNYVGKKKKRRK-------------------------RDPQAPRRPPSSFL 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N N V++VAK +G+ W T+ +K+PYE+ A + KY EE+E Y+
Sbjct: 102 LFCQDHYAQLKRENPNWSVVQVAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYR 161
Query: 356 R 356
+
Sbjct: 162 K 162
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
+RP ++L+C+D + + K+ENP ++ G W + EK+PYE+ KY
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKASGKMWSATTDAEKQPYEQRAALLRAKY 153
Query: 227 QAEKEAY 233
Q E E Y
Sbjct: 154 QEELEIY 160
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F+++ R + +N + +V K+ GE WK +++ ++RPYEE
Sbjct: 17 RKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGERWKALSDSERRPYEE 76
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E +Y
Sbjct: 77 KAATDKKRYEDEKASY 92
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAE 217
K K +RKKK KR Y+ + D ++ ++ENP F ++ +LG +WK +S
Sbjct: 10 TKTKRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGERWKALSDS 69
Query: 218 EKKPYEEKYQAEKEAY 233
E++PYEEK +K+ Y
Sbjct: 70 ERRPYEEKAATDKKRY 85
>gi|383854854|ref|XP_003702935.1| PREDICTED: high mobility group protein 20A-like [Megachile
rotundata]
Length = 329
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRP 335
K+ K +D PK P+T YF F ++RR + +N + E+ K+ EW N+ +QK+
Sbjct: 72 KRKKTPRDATAPKQPLTGYFRFLNDRREKVRNENPTLSFAEITKLLASEWSNLPADQKQQ 131
Query: 336 YEEIAKKNKEKYNEEMEAYK 355
Y + A+++KE+YN E YK
Sbjct: 132 YLDAAEQDKERYNREFSDYK 151
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y + D+ + + ENP F EIT +L ++W N+ A++K+ Y + + +KE Y
Sbjct: 84 KQPLTGYFRFLNDRREKVRNENPTLSFAEITKLLASEWSNLPADQKQQYLDAAEQDKERY 143
Query: 234 LQVMAKERRESEAMKLLEE 252
+ + + +++EA +L E
Sbjct: 144 NREFS-DYKQTEAYRLFSE 161
>gi|255083979|ref|XP_002508564.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
gi|226523841|gb|ACO69822.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
Length = 288
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP KPK P AY F R + A N ++ E+AK+ GE+WKNM + YE++A++
Sbjct: 114 DPNKPKGPKGAYMCFVQIARPKINAANPDLKFAEIAKMLGEQWKNMDTTTRAGYEKMAEQ 173
Query: 343 NKEKYNEEMEAY 354
+KE+Y E+ AY
Sbjct: 174 DKERYQREIAAY 185
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P Y+ + + + NP+ +F EI +LG +WKN+ + YE+ + +KE Y
Sbjct: 119 KGPKGAYMCFVQIARPKINAANPDLKFAEIAKMLGEQWKNMDTTTRAGYEKMAEQDKERY 178
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTA 259
+ +A SEA LE+ K+K A
Sbjct: 179 QREIAAYVPMSEAG--LEQLRKEKAA 202
>gi|27371255|gb|AAH41216.1| Smarce1 protein [Xenopus laevis]
Length = 402
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + M+ E Y+ + D P D
Sbjct: 114 TYHNSPAYLAYISAKSRAEAALEEESRQRQSRMDKGEPYMSIQPAED-----PDDYDDGF 168
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH A F L S +++ D ++V+ A++
Sbjct: 169 SMKHTAAARFQRNHRLISEILSESVVPDVRSVVTTARM 206
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK P +AYFL+ +E R A+NK V E+ K+ G+EWK + ++K+ +E
Sbjct: 546 RKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGISVTELTKLAGKEWKKIDPDEKQKFER 605
Query: 339 IAKKNKEKYNEEMEAYK 355
+ +K+K K++ M+ YK
Sbjct: 606 MYQKSKVKFDAAMKEYK 622
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KRP Y LW + K EN E+T + G +WK + +EK+ +E
Sbjct: 546 RKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGISVTELTKLAGKEWKKIDPDEKQKFER 605
Query: 225 KYQAEK 230
YQ K
Sbjct: 606 MYQKSK 611
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
Length = 93
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+++KDP PK ++AY F+++ R + A+N N+ ++ K+ G +WK + +E+K+PY++
Sbjct: 13 RRKKDPNAPKRGLSAYMFFANDNRDIVKAENPNITFGQIGKVLGAKWKELNDEEKQPYQD 72
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y E E Y
Sbjct: 73 KADADKKRYESEKELY 88
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R+KK KR Y+ + D + K ENP F +I +LGAKWK ++ EEK+PY++
Sbjct: 13 RRKKDPNAPKRGLSAYMFFANDNRDIVKAENPNITFGQIGKVLGAKWKELNDEEKQPYQD 72
Query: 225 KYQAEKEAY 233
K A+K+ Y
Sbjct: 73 KADADKKRY 81
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F++E+R + +N + +V K+ GE WK + E+Q+ PYE
Sbjct: 17 KKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYEA 76
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E +Y
Sbjct: 77 KAAADKKRYEDEKASY 92
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ +LG +WK ++ +++ PYE K A+K+ Y
Sbjct: 26 KRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYEAKAAADKKRY 85
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KKE+DP PK P+T +FLF+ + R ++ N + +++++ G +W +M+E++K+PY +
Sbjct: 43 KKERDPNAPKKPLTPFFLFNQKYREKVVDRNPEIKLTQISQMAGNKWSSMSEQEKKPYVD 102
Query: 339 IAKKNKEKYNEEMEAY 354
KEKY +E++ Y
Sbjct: 103 QYNAAKEKYEQELKDY 118
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 142 KMKEFKPNMTLPIVQCLKDKE-------QDRKKKGCAERKRPSPPYILWCKDQWNEAKKE 194
K ++F +M Q LKD+ + +K++ K+P P+ L+ + +
Sbjct: 13 KFQQFFAHMNKFCQQFLKDQNVTEIQVPEKKKERDPNAPKKPLTPFFLFNQKYREKVVDR 72
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQ 235
NPE + +I+ + G KW ++S +EKKPY ++Y A KE Y Q
Sbjct: 73 NPEIKLTQISQMAGNKWSSMSEQEKKPYVDQYNAAKEKYEQ 113
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 48/190 (25%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPY-------EEKYQ 227
+ PY + K + E KK+ P + EI+ KWK +S +EK+ + E+YQ
Sbjct: 53 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQ 112
Query: 228 AEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL 287
AE AY D K+ + +KDP
Sbjct: 113 AEVAAY-------------------------------------GGEDMLRKRKRVKKDPN 135
Query: 288 KPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
PK ++A+F FS ++R + + V +VA+ G WK +++E++ YE A ++KE
Sbjct: 136 APKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRYWKALSDEERMVYERKALEDKE 195
Query: 346 KYNEEMEAYK 355
+Y EEM YK
Sbjct: 196 RYAEEMRNYK 205
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F++E+R + +N + +V K+ GE WK + ++Q+ PYE
Sbjct: 17 KKKKDPNAPKRGLSAYMFFANEQRENVREENPGITFGQVGKVLGERWKALNDKQRTPYEA 76
Query: 339 IAKKNKEKYNEEMEAY 354
A ++K++Y +E +Y
Sbjct: 77 KAAQDKKRYEDEKASY 92
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ +LG +WK ++ +++ PYE K +K+ Y
Sbjct: 26 KRGLSAYMFFANEQRENVREENPGITFGQVGKVLGERWKALNDKQRTPYEAKAAQDKKRY 85
>gi|395501488|ref|XP_003755126.1| PREDICTED: transcription factor A, mitochondrial [Sarcophilus
harrisii]
Length = 208
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P YI + + K++NP+ + EI L W+ + +KK YEE +AE E Y
Sbjct: 11 KKPLSAYIRFTMEHRPLLKEQNPDLKSTEIIKKLAEAWRELPQSKKKVYEEATKAEFEVY 70
Query: 234 LQVMAK---ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KP 289
+ +K E +E L EE+ +++ E++ K K+E KP
Sbjct: 71 KEENSKYIAELNHAEKKNLKEEKRRKRVRKEII---------------KKKRELTIFGKP 115
Query: 290 KHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY 347
K P + Y +F SE + K + E KI EEWKN++ QK+ Y ++A+ +K +Y
Sbjct: 116 KKPRSGYNIFISEH----FKEGKGISSQETMKILNEEWKNLSPSQKQVYLQLAEDDKIRY 171
Query: 348 NEEMEAYKRRMKEL 361
E+++++ +M E+
Sbjct: 172 ANEIKSWEEKMIEI 185
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P++AY F+ E R L N ++ E+ K E W+ + + +K+ YEE K E
Sbjct: 10 PKKPLSAYIRFTMEHRPLLKEQNPDLKSTEIIKKLAEAWRELPQSKKKVYEEATKAEFEV 69
Query: 347 YNEEMEAY 354
Y EE Y
Sbjct: 70 YKEENSKY 77
>gi|270005614|gb|EFA02062.1| hypothetical protein TcasGA2_TC007692 [Tribolium castaneum]
Length = 557
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKR 334
KK K+ KDP PK ++A+F FS++ RA + + N V ++AK G W + E K
Sbjct: 438 GKKRKQVKDPNAPKRSLSAFFWFSNDERAKVKSQNPEFGVGDIAKELGRRWADAEPEMKS 497
Query: 335 PYEEIAKKNKEKYNEEMEAYKRR 357
YE +A K+K +Y +EM AYK++
Sbjct: 498 KYEALADKDKARYEKEMTAYKKK 520
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 231 EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKP------KKEK 284
EA + ++ SE K + ++ K K E + + + + E D +N P K+ K
Sbjct: 32 EASVNFAEFSKKCSERWKTMSQKGKGK--FEDMAKLDKVRYERDMKNYDPPKGQKKKRFK 89
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +A+FLF + R + +++ + + AK GE W + + E K+PYE A K
Sbjct: 90 DPNAPKRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENKQPYERKAAK 149
Query: 343 NKEKYNEEMEAYK 355
KEKY++++ AY+
Sbjct: 150 LKEKYDKDIVAYR 162
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C D + K E+P + LG W + SAE K+PYE K KE Y
Sbjct: 95 KRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENKQPYERKAAKLKEKY 154
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KPK +++Y F E + + N E +K E WK M+++ K +E++
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKGKGKFEDM 62
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y +M+ Y
Sbjct: 63 AKLDKVRYERDMKNY 77
>gi|47551063|ref|NP_999708.1| high mobility group protein 1 homolog [Strongylocentrotus
purpuratus]
gi|729735|sp|P40644.1|HMGH_STRPU RecName: Full=High mobility group protein 1 homolog
gi|161521|gb|AAA91277.1| high mobility group 1 protein [Strongylocentrotus purpuratus]
Length = 200
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 33/186 (17%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + +D E K +P + F E + A+WK + + K + EK +K Y + M
Sbjct: 18 YAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFHEKSMRDKVRYDREM 77
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+K ++NK+ ++ KDP PK ++A+F
Sbjct: 78 Q-----------------------------SYKPPKGEKNKRRRRRKDPDAPKRNLSAFF 108
Query: 298 LFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+FS E RAA+ + N +V ++AK W+ MT +K P+++ A K+KE+Y + M YK
Sbjct: 109 IFSGENRAAIKSVHPNWSVGDIAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYK 168
Query: 356 RRMKEL 361
+ K +
Sbjct: 169 AKAKPM 174
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKN----VLEVAKITGEEWKNMTEEQKRPY 336
KK++D KP+ ++AY F + RA ++ N E +K WK + E+ K +
Sbjct: 3 KKDRDSSKPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVF 62
Query: 337 EEIAKKNKEKYNEEMEAYK 355
E + ++K +Y+ EM++YK
Sbjct: 63 HEKSMRDKVRYDREMQSYK 81
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F++E R + A+N + +V K+ GE+WK M+ E K PYE
Sbjct: 11 RKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMSSEDKTPYET 70
Query: 339 IAKKNKEKYNEEMEAYKRR 357
A+ +K++Y +E Y ++
Sbjct: 71 KAEADKKRYEKEKAEYAKK 89
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K RKKK KR Y+ + + + + ENP F ++ +LG KWK +S+E+K
Sbjct: 7 KRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMSSEDKT 66
Query: 221 PYEEKYQAEKEAY 233
PYE K +A+K+ Y
Sbjct: 67 PYETKAEADKKRY 79
>gi|189236107|ref|XP_973934.2| PREDICTED: similar to High mobility group protein DSP1 (Protein
dorsal switch 1) [Tribolium castaneum]
Length = 505
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKR 334
KK K+ KDP PK ++A+F FS++ RA + + N V ++AK G W + E K
Sbjct: 386 GKKRKQVKDPNAPKRSLSAFFWFSNDERAKVKSQNPEFGVGDIAKELGRRWADAEPEMKS 445
Query: 335 PYEEIAKKNKEKYNEEMEAYKRR 357
YE +A K+K +Y +EM AYK++
Sbjct: 446 KYEALADKDKARYEKEMTAYKKK 468
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRP 335
K +K+KDP PK ++AY F++E R + A+N + +V K+ GE+WK +T E+K P
Sbjct: 7 KATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTGEEKGP 66
Query: 336 YEEIAKKNKEKYNEEMEAY 354
YE A+ +K++Y +E Y
Sbjct: 67 YENKAEADKKRYEKEKAEY 85
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KR Y+ + + + + ENP F ++ +LG KWK ++ EEK PYE
Sbjct: 10 RKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTGEEKGPYEN 69
Query: 225 KYQAEKEAY 233
K +A+K+ Y
Sbjct: 70 KAEADKKRY 78
>gi|341879743|gb|EGT35678.1| CBN-HMG-1.2 protein [Caenorhabditis brenneri]
Length = 235
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 34/189 (17%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
+ PY + K + E KK+ P + EI+ KWK + +EK+ + E A+K+A
Sbjct: 51 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE--LAQKDA-- 106
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
ER ++E E D K+ + +KDP PK ++
Sbjct: 107 -----ERYQAEVAAYGGE---------------------DAMRKRKRAKKDPHAPKRALS 140
Query: 295 AYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
A+F +S ++R + + + + V +VA+ G+ WK +++E K YE A+ +K++Y +EM
Sbjct: 141 AFFFYSQDKRPEIQSAHPDWKVGQVAQELGKMWKQVSQELKDSYEAKAQADKDRYADEMR 200
Query: 353 AYKRRMKEL 361
YK M ++
Sbjct: 201 NYKSEMSKM 209
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R KK KR + + +D+ E + +P+ + ++ LG WK VS E K YE
Sbjct: 127 RAKKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQVAQELGKMWKQVSQELKDSYEA 186
Query: 225 KYQAEKEAYLQVMAKERRESE---AMKLLEEEH 254
K QA+K+ Y M + E M EE+H
Sbjct: 187 KAQADKDRYADEMRNYKSEMSKMTGMDHYEEDH 219
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F++E+R + +N + +V K+ GE WK + E+Q+ PYE
Sbjct: 17 KKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYEA 76
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E +Y
Sbjct: 77 KAAADKKRYEDEKASY 92
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ +LG +WK ++ +++ PYE K A+K+ Y
Sbjct: 26 KRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYEAKAAADKKRY 85
>gi|146218567|gb|AAI40014.1| High-mobility group box 1 [synthetic construct]
gi|146218571|gb|AAI40019.1| High-mobility group box 1 [synthetic construct]
gi|146327050|gb|AAI41845.1| High-mobility group box 1 [Homo sapiens]
Length = 215
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+ YE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQHYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|397582113|gb|EJK52170.1| hypothetical protein THAOC_28594 [Thalassiosira oceanica]
Length = 578
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRP 335
+K + +K+PL PK P++A+ +++ +R + DN ++ +V+++ GE W+N EQKRP
Sbjct: 423 RKVRAKKNPLAPKRPMSAFLMYAQRQRKIVQGDNPDLSNADVSRLLGEHWRNAKIEQKRP 482
Query: 336 YEEIAKKNKEKYNEEMEAYKRRMKEL 361
+ E K ++ Y + EA+K +K
Sbjct: 483 FLEREKAERKIYKAKTEAFKNNLKYF 508
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R KK KRP ++++ + Q + +NP+ +++ +LG W+N E+K+P+ E
Sbjct: 426 RAKKNPLAPKRPMSAFLMYAQRQRKIVQGDNPDLSNADVSRLLGEHWRNAKIEQKRPFLE 485
Query: 225 KYQAEKEAY 233
+ +AE++ Y
Sbjct: 486 REKAERKIY 494
>gi|410975149|ref|XP_003993997.1| PREDICTED: transcription factor A, mitochondrial [Felis catus]
Length = 246
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 98/190 (51%), Gaps = 17/190 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ +AY
Sbjct: 51 KKPLTSYVRFSKEQLPIFKAQNPDAKNSELIRKIAQLWRELPDSEKKIYEDAYRADWQAY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
E + ++E+ + LE+ +Q K+ K K ++ KPK P
Sbjct: 111 ----------KEEINRIQEQLTPSQIVS-LEKEIQQKRLKKKALIKKRELTMLGKPKRPR 159
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+AY ++ +ER ++K+ K+ E WKN++ QK+ Y ++A +K +Y EM
Sbjct: 160 SAYNIYIAER----FQEHKDGTSQVKLKTINENWKNLSSSQKQVYIQLANDDKIRYYNEM 215
Query: 352 EAYKRRMKEL 361
++++ +M E+
Sbjct: 216 KSWEEQMLEV 225
>gi|444722693|gb|ELW63375.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Tupaia chinensis]
Length = 386
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYVNEYEAEKIEYNESMK 113
Query: 231 -----EAYLQVMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEK 284
AYL + +RR A LEE +Q+ + ME E YL + D P
Sbjct: 114 AYHNSPAYLAYINAKRRAEAA---LEEGSRQRQSRMERGEPYLSIQPAED-----PGDSD 165
Query: 285 DPLKPKHPVTAYF 297
+ KH TA F
Sbjct: 166 EGFSMKHTATARF 178
>gi|25395797|pir||E88479 protein F47D12.4 [imported] - Caenorhabditis elegans
Length = 202
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 34/189 (17%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
+ PY + K + E KK+ P + EI+ KWK + +EK+ + E A+K+A
Sbjct: 18 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE--LAQKDA-- 73
Query: 235 QVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVT 294
ER ++E E D K+ + +KDP PK ++
Sbjct: 74 -----ERYQAEVAAYGGE---------------------DAMRKRKRAKKDPHAPKRALS 107
Query: 295 AYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
A+F +S ++R + A + + V +VA+ G+ WK + +E K YE+ A+ +K++Y +EM
Sbjct: 108 AFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMR 167
Query: 353 AYKRRMKEL 361
YK M+++
Sbjct: 168 NYKAEMQKM 176
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYF--LFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
K P++ K +F + E + +N V E++K E+WK M +++KR + E+A+
Sbjct: 11 KPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQ 70
Query: 342 KNKEKYNEEMEAY 354
K+ E+Y E+ AY
Sbjct: 71 KDAERYQAEVAAY 83
>gi|307170751|gb|EFN62876.1| High mobility group protein 20A [Camponotus floridanus]
Length = 328
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRP 335
K+ K +D PK P++ YFLF ++RR + ++N ++ E+ K+ EW + +QK+
Sbjct: 67 KRKKTPRDATAPKQPLSGYFLFLNDRREKVRSENPSLTFTEITKLLASEWSKLPGDQKQQ 126
Query: 336 YEEIAKKNKEKYNEEMEAYK 355
Y + A+++KE+YN E YK
Sbjct: 127 YLDAAEQDKERYNREFSNYK 146
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y L+ D+ + + ENP F EIT +L ++W + ++K+ Y + + +KE Y
Sbjct: 79 KQPLSGYFLFLNDRREKVRSENPSLTFTEITKLLASEWSKLPGDQKQQYLDAAEQDKERY 138
Query: 234 LQVMAKERRESEAMKLLEEEHKQK 257
+ + +++EA +L E+ ++
Sbjct: 139 NREFSN-YKQTEAYRLFNEKQSER 161
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 32/178 (17%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
++ C+++ ++ K N F E + +WK +S EKK + + +K+ + MA
Sbjct: 17 FVQTCREE-HKKKHPNENVVFAEFSKKCAERWKTMSESEKKRFHQMADKDKKRFDTEMA- 74
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
+K ++KK K+ KDP PK P++A+F F
Sbjct: 75 ----------------------------DYKPPKGDKSKKRKRAKDPNAPKRPLSAFFWF 106
Query: 300 SSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
++ R + + + +V EVAK G W + ++ K YE +A K+K +Y +E++AYK
Sbjct: 107 CNDERPNVRQESPDASVGEVAKELGRRWNEVGDDVKSKYEGLAAKDKARYEKELKAYK 164
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F+ E+R + +N + +V K+ GE WK + ++Q+ PYE
Sbjct: 17 KKKKDPNAPKRGLSAYMFFAQEQRDNVREENPGISFGQVGKVLGERWKALNDKQRTPYET 76
Query: 339 IAKKNKEKYNEEMEAY 354
A+++K++Y +E +Y
Sbjct: 77 KAQEDKKRYEDEKASY 92
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 166 KKKGCAERKRPSPP------YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEK 219
K +G ++K P+ P Y+ + ++Q + ++ENP F ++ +LG +WK ++ +++
Sbjct: 12 KPRGEKKKKDPNAPKRGLSAYMFFAQEQRDNVREENPGISFGQVGKVLGERWKALNDKQR 71
Query: 220 KPYEEKYQAEKEAY 233
PYE K Q +K+ Y
Sbjct: 72 TPYETKAQEDKKRY 85
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPY 336
K + +KDP PK ++AY F++E+R + +N + +V KI GE WK + ++Q+ PY
Sbjct: 16 KKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAPY 75
Query: 337 EEIAKKNKEKYNEEMEAY 354
E A +K++Y +E +AY
Sbjct: 76 EAKAATDKKRYEDEKQAY 93
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK-------Y 226
KR Y+ + +Q ++ENP F ++ ILG +WK ++ +++ PYE K Y
Sbjct: 27 KRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAPYEAKAATDKKRY 86
Query: 227 QAEKEAY 233
+ EK+AY
Sbjct: 87 EDEKQAY 93
>gi|255715687|ref|XP_002554125.1| KLTH0E14850p [Lachancea thermotolerans]
gi|238935507|emb|CAR23688.1| KLTH0E14850p [Lachancea thermotolerans CBS 6340]
Length = 93
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEE 338
+++KDP PK ++AY F++E R + A+N V +V ++ G++WK +T+E+K+PYE
Sbjct: 13 RRKKDPNAPKRALSAYMFFANENRDIVRAENPGVTFGQVGRLLGDKWKALTDEEKQPYEA 72
Query: 339 IAKKNKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 73 KHAADKKRYESEKELY 88
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP F ++ +LG KWK ++ EEK+
Sbjct: 9 KRTTRRKKDPNAPKRALSAYMFFANENRDIVRAENPGVTFGQVGRLLGDKWKALTDEEKQ 68
Query: 221 PYEEKYQAEKEAY 233
PYE K+ A+K+ Y
Sbjct: 69 PYEAKHAADKKRY 81
>gi|229366870|gb|ACQ58415.1| Transcription factor A, mitochondrial precursor [Anoplopoma
fimbria]
Length = 293
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 140 LQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAE 199
L + P+ + V+CL + KRP Y+ + Q + NPE +
Sbjct: 27 LARCASVLPSAYVNPVRCLTSQ-------ASGPPKRPLNGYLRYVLQQQPVITRHNPEIK 79
Query: 200 FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTA 259
+I + +W+ +S E+K+P+EE V+A+E+ + + L+ Q T
Sbjct: 80 SVDIIRKIAQQWRTMSPEQKRPFEEA---------SVLAREQFKVD----LQHYQAQLTP 126
Query: 260 MELLEQYLQFKQE-ADKENKKPKKEKDPL-KPKHPVTAYFLFSSE-----RRAALLADNK 312
++ +Q + +Q A ++ + K+E + L KPK P + + +F SE R A K
Sbjct: 127 AQVQQQAQEKRQRMAKRKAIRKKRELNNLGKPKRPRSPFNIFMSEHFEEARGTTTQAKMK 186
Query: 313 NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKEL 361
++L E+W+N+ QK+ Y ++A+ +K +Y EM++++ M E+
Sbjct: 187 SLL-------EDWRNLFSHQKQVYMQLAEDDKIRYKNEMKSWEDHMMEI 228
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 19 FVQTCRE---EHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKY 153
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +SA+EK +EE M
Sbjct: 19 FVQTCRE---EHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEE------------M 63
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
AK + + E + KT + + KK+KDP PK P +A+F
Sbjct: 64 AKNDK-------VRYEREMKTYIPPKGEKKG------------KKKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W T + K PYE+ A K KEKY +++ AYK
Sbjct: 105 LFCSEHRPQIKSESPGLSIGDTAKKLGEMWSEQTPKDKLPYEQKAAKLKEKYEKDVAAYK 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
>gi|384489718|gb|EIE80940.1| hypothetical protein RO3G_05645 [Rhizopus delemar RA 99-880]
Length = 176
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 273 ADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTE 330
AD NKK K EKDP PK +++Y L+S R + A++ ++ +E+AK+ GE W ++E
Sbjct: 39 ADHVNKKKKVEKDPNAPKRNLSSYMLYSQAVRPKVAAEHPDMKAIEIAKLVGEMWNKLSE 98
Query: 331 EQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
++K PY + A+K K ++ +E +YK +
Sbjct: 99 KEKAPYIKQAEKEKIRFEKENASYKTTL 126
>gi|268565525|ref|XP_002639471.1| Hypothetical protein CBG04066 [Caenorhabditis briggsae]
Length = 689
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP +PK TAYFL+ + RA+L D V EVAK G +WK M+ + K+ +E+ A ++K
Sbjct: 554 DPNEPKRAATAYFLWFNANRASLKEDGDTVPEVAKKGGAKWKEMSADDKKEWEQKAAQDK 613
Query: 345 EKYNEEMEAYKR 356
+Y EM+ YK+
Sbjct: 614 IRYENEMKEYKK 625
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK+KDP PK ++AY F++E+R + +N + +V K+ GE WK ++++Q+ PYEE
Sbjct: 17 KKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEE 76
Query: 339 IAKKNKEKYNEEMEAY 354
A +K++Y +E Y
Sbjct: 77 KAAADKKRYEDEKANY 92
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAE 217
K + ++KKK KR Y+ + +Q ++ENP F ++ +LG +WK +S +
Sbjct: 10 TKGRRAEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDK 69
Query: 218 EKKPYEEKYQAEKEAY 233
++ PYEEK A+K+ Y
Sbjct: 70 QRAPYEEKAAADKKRY 85
>gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191889|gb|AEE30010.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 147
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F + R + NK+V V K GE+WK++++ +K PY A
Sbjct: 30 KDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKA 89
Query: 341 KKNKEKYNEEMEAYKRRM 358
K K +Y + M+AY +++
Sbjct: 90 DKRKVEYEKNMKAYNKKL 107
>gi|389582482|dbj|GAB65220.1| high mobility group protein putative [Plasmodium cynomolgi strain
B]
Length = 194
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DPL PK ++AY + ++R L+ + K+V +V K+ GE W ++ QK PYE+ A
Sbjct: 115 DPLAPKRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGKLSAAQKTPYEKKA 174
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+ +K +Y++E+E Y++ KE
Sbjct: 175 QLDKVRYSKEIEEYRKTKKE 194
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKE 231
KR Y+ + KD+ E KE PE + ++ ++G W +SA +K PYE+K Q +K
Sbjct: 120 KRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGKLSAAQKTPYEKKAQLDKV 179
Query: 232 AY 233
Y
Sbjct: 180 RY 181
>gi|68063985|ref|XP_673987.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|56492229|emb|CAH99818.1| high mobility group protein, putative [Plasmodium berghei]
Length = 96
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQK 333
K+ K +KDP PK ++AY F+ E+RA ++ + K+V V K+ GE W + E +K
Sbjct: 10 KRRKNKKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDEREK 69
Query: 334 RPYEEIAKKNKEKY-NEEMEAYKRRMK 359
PYE+ A+++K +Y E+ME K +MK
Sbjct: 70 APYEKKAQEDKIRYEKEKMEYAKSKMK 96
>gi|165970508|gb|AAI58368.1| tfam protein [Xenopus (Silurana) tropicalis]
Length = 285
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 100/191 (52%), Gaps = 19/191 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+ + +Q + K+ PEA+ ++T I+ +WK + + EK+ YE AE++ Y
Sbjct: 60 KRPLTAYLRYSIEQRPKLHKQYPEAKMMDLTKIIALEWKGLPSAEKERYEVVANAEQKKY 119
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+ + + R + M+L E H+++ L A +++ + K+E L +PK P
Sbjct: 120 REEVKQYREKLSPMQL--ELHREQRRQRL----------AKRKSVRKKRELTVLGRPKRP 167
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITG--EEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+ + +F SE D K +K+ ++W+ + QK+ Y ++A+ +K +Y E
Sbjct: 168 RSPFNIFMSEH----FQDAKGASSQSKMKSLRDDWERLHTSQKQTYNQLAEDDKIRYENE 223
Query: 351 MEAYKRRMKEL 361
M++++ +M E+
Sbjct: 224 MKSWEEQMMEI 234
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P+TAY +S E+R L ++++ KI EWK + +K YE +A ++K
Sbjct: 59 PKRPLTAYLRYSIEQRPKLHKQYPEAKMMDLTKIIALEWKGLPSAEKERYEVVANAEQKK 118
Query: 347 YNEEMEAYK 355
Y EE++ Y+
Sbjct: 119 YREEVKQYR 127
>gi|219110207|ref|XP_002176855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411390|gb|EEC51318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 200
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 29/184 (15%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + L+ + K+E PEA F E+ IL K+K ++ +E + +E+K + +K Y
Sbjct: 42 KRAMSAFFLFSQGNRVNVKEEFPEASFGEVARILARKYKELTEKEMRKWEKKAEQDKIRY 101
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+EE K E + K+ K +KDP PK +
Sbjct: 102 -----------------QEEMKHYVPAE----------DPTGGGKRKKAKKDPNAPKRNM 134
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+AYFL+S E R + ADN +A++ E++K ++ ++++ +++ A +KE+Y EM
Sbjct: 135 SAYFLYSIEVRPTVKADNPEATFGGIARLISEKFKALSPKERKVWDDKAIADKERYTSEM 194
Query: 352 EAYK 355
E YK
Sbjct: 195 EIYK 198
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP KPK ++A+FLFS R + + + EVA+I ++K +TE++ R +E+ A++
Sbjct: 37 DPNKPKRAMSAFFLFSQGNRVNVKEEFPEASFGEVARILARKYKELTEKEMRKWEKKAEQ 96
Query: 343 NKEKYNEEMEAY 354
+K +Y EEM+ Y
Sbjct: 97 DKIRYQEEMKHY 108
>gi|402881454|ref|XP_003904286.1| PREDICTED: transcription factor A, mitochondrial-like [Papio
anubis]
Length = 248
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 96/188 (51%), Gaps = 13/188 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q + +NP+A+ E+ + W+ + EKK Y E Y+A+ E Y
Sbjct: 51 KKPVSSYLRFSKEQLPIFRAQNPDAKTTELVRRIAKHWRELPDSEKKVYREAYKADWEVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ +++ + E + + LE+ + K+ K K K+ KPK P
Sbjct: 111 KEEISRFK-----------EQLTPSEITSLEKEILDKRLKRKAVTKRKELIQLGKPKRPR 159
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+AY ++ +ER D+ E K E WKN+++ +K Y ++AK+++ +Y+ EM++
Sbjct: 160 SAYNIYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKEIYIQLAKEDEIRYHNEMKS 217
Query: 354 YKRRMKEL 361
++ M E+
Sbjct: 218 WEEHMIEI 225
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK PV++Y FS E+ A N + E+ + + W+ + + +K+ Y E K + E
Sbjct: 50 PKKPVSSYLRFSKEQLPIFRAQNPDAKTTELVRRIAKHWRELPDSEKKVYREAYKADWEV 109
Query: 347 YNEEMEAYKRRM 358
Y EE+ +K ++
Sbjct: 110 YKEEISRFKEQL 121
>gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi]
Length = 141
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R D NK V V K G +WK M++ +K PY +
Sbjct: 28 KDPNKPKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVAKS 87
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+K K+ Y + M AY ++ E
Sbjct: 88 EKRKQDYEKNMRAYNKKQAE 107
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +SA+EK +E+ + +K Y
Sbjct: 19 FVQTCRE---EHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFEDMAKGDKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT + + KK+KDP PK P +A+F
Sbjct: 72 ---------------EREMKTYIPPKGETKG------------KKKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE+R + ++ + + AK GE W T + K P+E+ A K KEKY +++ AY+
Sbjct: 105 LFCSEQRPQIKSETPGLSIGDTAKKLGERWSEQTSKDKLPFEQKAAKLKEKYEKDVAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C +Q + K E P + LG +W ++++K P+E+K KE Y
Sbjct: 97 KRPPSAFFLFCSEQRPQIKSETPGLSIGDTAKKLGERWSEQTSKDKLPFEQKAAKLKEKY 156
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 157 EKDVAAYR 164
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +SA+EK +E+ + +K Y
Sbjct: 19 FVQTCRE---EHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFEDMAKGDKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT + + KK+KDP PK P +A+F
Sbjct: 72 ---------------EREMKTYIPPKGETKG------------KKKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE+R + ++ + + AK GE W T + K P+E+ A K KEKY +++ AY+
Sbjct: 105 LFCSEQRPQIKSETPGLSIGDTAKKLGERWSEQTSKDKLPFEQKAAKLKEKYEKDVAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C +Q + K E P + LG +W ++++K P+E+K KE Y
Sbjct: 97 KRPPSAFFLFCSEQRPQIKSETPGLSIGDTAKKLGERWSEQTSKDKLPFEQKAAKLKEKY 156
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 157 EKDVAAYR 164
>gi|348533213|ref|XP_003454100.1| PREDICTED: transcription factor A, mitochondrial-like [Oreochromis
niloticus]
Length = 287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 30/227 (13%)
Query: 140 LQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAE 199
L + P+ V+CL + + + KRP Y+ + + Q ++NPE +
Sbjct: 26 LARCTSVLPSAFFSPVKCLTSEAR-------SPPKRPLNGYMRYVQQQKPIVARQNPEIK 78
Query: 200 FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKL-LEEEHKQKT 258
++ + +W+++S E+K+P++ EA L R E K+ LE Q T
Sbjct: 79 AVDLIKTIAQQWRSMSPEQKQPFQ-------EASL-------RAREQFKVDLERYQAQLT 124
Query: 259 AMELLEQYLQFKQ-EADKENKKPKKEKDPL-KPKHPVTAYFLFSSERRAALLADNKNVLE 316
+L +Q + +Q A ++ + K+E L KPK P + + +F SE + K +
Sbjct: 125 PAQLQQQAQEKRQRRAKRKAIRKKRELTNLGKPKRPRSPFNIFMSEH----FEEAKGITS 180
Query: 317 VAKITG--EEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKEL 361
AK+ E+W+N+ QK+ Y ++A+ +K +Y EM++++ M E+
Sbjct: 181 QAKMKSLLEDWRNLFSHQKKVYTQLAEDDKIRYKNEMKSWEDHMVEI 227
>gi|268571579|ref|XP_002641089.1| C. briggsae CBR-HMG-1.2 protein [Caenorhabditis briggsae]
Length = 239
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 34/190 (17%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY- 233
+ PY + K + E KK+ P + EI+ KWK + +EK+ + E Q + E Y
Sbjct: 51 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQ 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+V +AM+ K+ + +KDP PK +
Sbjct: 111 AEVSVAAYGGEDAMR-----------------------------KRKRAKKDPHAPKRAL 141
Query: 294 TAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+A+F +S ++R + + + V +VA+ G+ WK + +E K YE A+ +K++Y EEM
Sbjct: 142 SAFFFYSQDKRPEIQGQHPDWKVGQVAQELGKMWKLVPQETKDAYETKAQADKDRYAEEM 201
Query: 352 EAYKRRMKEL 361
YK+ M ++
Sbjct: 202 RHYKQEMTKM 211
>gi|410917438|ref|XP_003972193.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Takifugu rubripes]
Length = 426
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y Y+AEK Y + M
Sbjct: 72 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYEAEKIEYNESMK 131
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ++ E Y+ + D P D
Sbjct: 132 AYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAED-----PDDYDDGF 186
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH A F L S +++ D ++V+ A++
Sbjct: 187 SIKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARM 224
>gi|82594869|ref|XP_725606.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23480678|gb|EAA17171.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 105
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 260 MELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVL 315
M+ ++++ K + + K KDP PK ++AY F+ E+RA ++ + K+V
Sbjct: 1 MDGMKKFKDMKMGGKEVKXRRKNXKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVA 60
Query: 316 EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY-NEEMEAYKRRMK 359
V K+ GE W + E +K PYE+ A+++K +Y E+ME K +MK
Sbjct: 61 TVGKMIGEAWNKLDEREKAPYEKKAQEDKIRYEKEKMEYAKNKMK 105
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 33/184 (17%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PE + F E + +WK + +EK+ + E AEK+
Sbjct: 150 FVQTCRE---EHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHE--MAEKD------ 198
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K + KK K KDP PK ++A+F
Sbjct: 199 -KARYELE-----------------MQSYVPPKGTVVGKGKKRKAFKDPNAPKRSLSAFF 240
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F E R + A N V ++AK G +W +M E K YE++A+K+K +Y EM YK
Sbjct: 241 WFCHEERNKVKALNPEYGVGDIAKELGRKWSDMDAEVKSRYEQMAEKDKARYEAEMTEYK 300
Query: 356 RRMK 359
+ K
Sbjct: 301 LKCK 304
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirsutum]
Length = 148
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R + NK+V V K GE+WK++++ +K PY A+
Sbjct: 35 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAE 94
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K +Y + M+AY +R E
Sbjct: 95 KRKVEYEKNMKAYTKRQAE 113
>gi|388504718|gb|AFK40425.1| unknown [Lotus japonicus]
Length = 152
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALL---ADNKNVLEVAKITGEEWKNMTEEQKRP 335
K K KDP KPK P +A+F+F + R +NK V V K G +WK+M+E +K P
Sbjct: 34 KGKAAKDPNKPKRPPSAFFVFMEDFRKIFNKENPENKAVSAVGKAAGAKWKSMSEAEKAP 93
Query: 336 YEEIAKKNKEKYNEEMEAYKRRMKE 360
Y A+K K Y + M+AY ++ E
Sbjct: 94 YVAKAEKRKADYEKTMKAYNKKQAE 118
>gi|156843619|ref|XP_001644876.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156115528|gb|EDO17018.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N +V +V +I GE+WK MT+E K+P++ A+
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVSFGQVGRILGEKWKAMTDEDKQPFDAKAEA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + K ENP+ F ++ ILG KWK ++ E+K+P++ K +A+K+ Y
Sbjct: 22 KRALSAYMFFANETRDIVKAENPDVSFGQVGRILGEKWKAMTDEDKQPFDAKAEADKKRY 81
>gi|444513275|gb|ELV10301.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 36/171 (21%)
Query: 188 WNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESE 245
+ E K++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 23 FQEEHKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY------------ 70
Query: 246 AMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRA 305
E + KT Y+ K E KK KDP PK P+ A+FLF SE R
Sbjct: 71 -------EREMKT-------YIPPKGETK------KKFKDPNAPKRPLLAFFLFCSEYRP 110
Query: 306 ALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+ ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY
Sbjct: 111 QIKGEHPGLSIGDVAKKLGEMWNNTAADGKQPYEKKAAKLKEKYEKDIAAY 161
>gi|451847653|gb|EMD60960.1| hypothetical protein COCSADRAFT_98214 [Cochliobolus sativus ND90Pr]
Length = 106
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E+R + DN + EV K+ GE+WK + E+Q++PYE A
Sbjct: 24 DPNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRQPYEAKAAL 83
Query: 343 NKEKYNEEMEAY 354
+K++Y +E AY
Sbjct: 84 DKKRYEQEKAAY 95
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK-------Y 226
KR Y+ + +Q + +++NP +F E+ +LG KWK ++ ++++PYE K Y
Sbjct: 29 KRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRQPYEAKAALDKKRY 88
Query: 227 QAEKEAY 233
+ EK AY
Sbjct: 89 EQEKAAY 95
>gi|354468511|ref|XP_003496696.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
gi|344237248|gb|EGV93351.1| High mobility group protein B1 [Cricetulus griseus]
Length = 220
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 41/189 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY-----NEE 350
LF SE R + ++ + +VAK GE W N + K+P+E+ A K KEKY E+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPFEKKAAKLKEKYEKDIAGED 163
Query: 351 MEAYKRRMK 359
+ AY+ + K
Sbjct: 164 IAAYRAKGK 172
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E WK M+ ++K +E++A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y EM+ Y
Sbjct: 65 KADKARYEREMKTY 78
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+P+E+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPFEKKAAKLKEKY 155
Query: 234 LQVMAKE 240
+ +A E
Sbjct: 156 EKDIAGE 162
>gi|392876742|gb|AFM87203.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEEGGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEEGGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|70946314|ref|XP_742884.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56522109|emb|CAH79930.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 102
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQK 333
K+ K +KDP PK ++AY F+ E+RA ++ + K+V V K+ GE W + E +K
Sbjct: 16 KRRKNKKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDEREK 75
Query: 334 RPYEEIAKKNKEKY-NEEMEAYKRRMK 359
PYE+ A+++K +Y E+ME K +MK
Sbjct: 76 APYEKKAQEDKLRYEKEKMEYAKNKMK 102
>gi|124512426|ref|XP_001349346.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|23499115|emb|CAD51195.1| high mobility group protein [Plasmodium falciparum 3D7]
Length = 99
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DPL PK ++AY + ++R ++ + K+V +V K+ GE W ++ QK PYE+ A
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKA 79
Query: 341 KKNKEKYNEEMEAYKRRMKE 360
+ +K +Y++E+E Y+++ +E
Sbjct: 80 QLDKVRYSKEIEEYRKKNQE 99
>gi|354476918|ref|XP_003500670.1| PREDICTED: high mobility group protein B4-like [Cricetulus griseus]
Length = 180
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 16 YIHFMLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 66
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + K++ +DP P+ P +++
Sbjct: 67 DKARYQEEMMNYMGKRRKRRK-------------------------RDPHAPRQPPSSFL 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LFS + A L DN N V++VAK TG+ W + K+PYE+ A + KY E++E Y+
Sbjct: 102 LFSLDHYAQLKHDNPNWSVVQVAKATGKMWSMTSNVDKQPYEQKAALLRAKYFEDVENYR 161
Query: 356 RRMK 359
++ +
Sbjct: 162 KQFQ 165
>gi|354474051|ref|XP_003499245.1| PREDICTED: transcription factor A, mitochondrial-like [Cricetulus
griseus]
Length = 224
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 100/190 (52%), Gaps = 17/190 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + +Q K ++P+A+ ++ + A W+ + EEKK YE ++A+ +AY
Sbjct: 32 KKPMTSYLRFSTEQLPRFKAKHPDAKLSDLVRKIAAAWRELPEEEKKVYEADFRADWKAY 91
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL--KPKH 291
+ ++K + Q T +L+ + +Q+ K+ KK + L KPK
Sbjct: 92 KEALSKFK-------------DQLTPAQLVSFEKEVRQKRLKKKASVKKRELMLLGKPKR 138
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
P +AY ++ SE + + + K E WK+++ ++++ Y ++AK ++ +Y+ EM
Sbjct: 139 PRSAYNIYVSE--SFQETKDGSAPGRLKTINEAWKSLSSDERQAYIQLAKDDRIRYDNEM 196
Query: 352 EAYKRRMKEL 361
++++ +M E+
Sbjct: 197 KSWEEQMAEV 206
>gi|349805567|gb|AEQ18256.1| putative smarce1 protein [Hymenochirus curtipes]
Length = 275
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK
Sbjct: 3 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 62
Query: 231 -----EAYLQVMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEK 284
AYL ++ + R A LEEE +Q+ + M+ E Y+ + D P
Sbjct: 63 TYHNSPAYLAYISAKSRAEAA---LEEESRQRQSRMDKGEPYMSIQPAED-----PDDYD 114
Query: 285 DPLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
D KH A F L S +++ D ++V+ A++
Sbjct: 115 DGFSMKHTAAARFQRNHRLISEILSESVVPDVRSVVTTARM 155
>gi|26342222|dbj|BAC34773.1| unnamed protein product [Mus musculus]
Length = 215
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRLPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|403286915|ref|XP_003934714.1| PREDICTED: high mobility group protein B1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286917|ref|XP_003934715.1| PREDICTED: high mobility group protein B1-like isoform 2 [Saimiri
boliviensis boliviensis]
gi|403286919|ref|XP_003934716.1| PREDICTED: high mobility group protein B1-like isoform 3 [Saimiri
boliviensis boliviensis]
gi|403286921|ref|XP_003934717.1| PREDICTED: high mobility group protein B1-like isoform 4 [Saimiri
boliviensis boliviensis]
Length = 206
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +SA+EK E+ +A+K Y
Sbjct: 19 FVQTCRE---EHKKQHPDSSVNFSEFSKKCSERWKTMSAKEKGKVEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPLAFF 103
Query: 298 LFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + ++ +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEYPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|225457566|ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R NK+V V K G++WK+M+E +K PY A+
Sbjct: 40 DPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAE 99
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K +Y + M+AY ++ E
Sbjct: 100 KRKVEYEKNMKAYNKKQAE 118
>gi|478813|pir||S29857 nonhistone chromosomal protein HMG-1 - human
gi|184251|gb|AAA64970.1| HMG-1 [Homo sapiens]
Length = 216
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRLPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|332375054|gb|AEE62668.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 167 KKGCAERKRPSPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEE 224
KKG ++ + Y + + E KK++PE F E + +WK + +EKK + E
Sbjct: 113 KKGDSKPRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKTMLDKEKKRFHE 172
Query: 225 KYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEK 284
+ +K+ Y ++E ++ Y K E + KK K+ K
Sbjct: 173 MAETDKKRY---------DTE-----------------MQSYTPPKGEKQR-GKKRKQIK 205
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++A+F FS++ R + A N V ++AK G W + E + +E +A K
Sbjct: 206 DPNAPKRSLSAFFWFSNDERGKVKAQNPEYGVGDIAKELGRRWADADPEVRSKFEALADK 265
Query: 343 NKEKYNEEMEAYKRRM 358
+K +Y +EM AYK+++
Sbjct: 266 DKIRYEKEMTAYKKKL 281
>gi|119584724|gb|EAW64320.1| hCG26831 [Homo sapiens]
Length = 212
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRLPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|408397883|gb|EKJ77020.1| hypothetical protein FPSE_02664 [Fusarium pseudograminearum CS3096]
Length = 537
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKR 334
K + PK +++ P+ P +AY LFS++ R L + N E+AK+ GE W+N+ +K
Sbjct: 105 KYRRHPKPDEN--APERPPSAYVLFSNKMREDLRSQNLTFTEIAKLVGENWQNLNASEKE 162
Query: 335 PYEEIAKKNKEKYNEEMEAYKR 356
YE A +KEKY+ ++ YK+
Sbjct: 163 AYESQANADKEKYHRDLVEYKK 184
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ + + +N F EI ++G W+N++A EK+ YE + A+KE Y
Sbjct: 119 RPPSAYVLFSNKMREDLRSQN--LTFTEIAKLVGENWQNLNASEKEAYESQANADKEKYH 176
Query: 235 QVMAKERRESEAMKLLEEEHKQK 257
+ + + ++ ++ K ++ H+ K
Sbjct: 177 RDLVEYKKTADYRKYMQYLHEFK 199
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP PK ++AY F++E+R + +N + +V K+ GE WK + E+Q+ PYE A
Sbjct: 20 KDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAA 79
Query: 342 KNKEKYNEEMEAY 354
+K++Y +E +AY
Sbjct: 80 ADKKRYEDEKQAY 92
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ +LG +WK ++ +++ PYE K A+K+ Y
Sbjct: 26 KRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRY 85
>gi|308499102|ref|XP_003111737.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
gi|308239646|gb|EFO83598.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
Length = 238
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 34/190 (17%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY- 233
+ PY + K + E KK+ P + EI+ KWK + +EK+ + E Q + E Y
Sbjct: 51 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQ 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+V +AM+ K+ + +KDP PK +
Sbjct: 111 AEVSVAAYGGEDAMR-----------------------------KRKRAKKDPHAPKRAL 141
Query: 294 TAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+A+F +S ++R + + + + V +VA+ G+ WK + +E K YE+ A+ +K++Y EEM
Sbjct: 142 SAFFFYSQDKRPEIQSAHPDWKVGQVAQELGKMWKLVPQETKDLYEQKAQADKDRYAEEM 201
Query: 352 EAYKRRMKEL 361
YK M+++
Sbjct: 202 RHYKSEMQKM 211
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R KK KR + + +D+ E + +P+ + ++ LG WK V E K YE+
Sbjct: 129 RAKKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQVAQELGKMWKLVPQETKDLYEQ 188
Query: 225 KYQAEKEAYLQVMAKERRESEAMKLLEE 252
K QA+K+ Y + M + E + M +E+
Sbjct: 189 KAQADKDRYAEEMRHYKSEMQKMTGMEQ 216
>gi|157382900|gb|ABV48885.1| high mobility group protein B3 [Physcomitrella patens]
Length = 158
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP PK P TA+F+F +E R +N K V V K GE+WK+M+E +K+P+ A
Sbjct: 49 DPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKAV 108
Query: 342 KNKEKYNEEMEAYKRR 357
+ K +Y++ + AY ++
Sbjct: 109 QKKSEYDKTISAYNKK 124
>gi|156101624|ref|XP_001616505.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148805379|gb|EDL46778.1| high mobility group protein, putative [Plasmodium vivax]
Length = 107
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 260 MELLEQYLQFKQEADKENKKPKK-EKDPLKPKHPVTAYFLFSSERRAALLADN----KNV 314
M+ ++++ K KE +K +K +KDP PK ++AY F+ E+RA +++ + K+V
Sbjct: 1 MDPMKKFNGMKNMGGKEVRKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDV 60
Query: 315 LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY-NEEMEAYKRRMK 359
V K+ GE W + E +K PYE+ A+++K +Y E++E K +MK
Sbjct: 61 ATVGKMIGEAWNKLDEREKAPYEKKAQEDKLRYEREKVEYAKTKMK 106
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 272 EADKENKKPKKE--KDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKN 327
EA K+ K PKK KDP +P+ PV+AY LF + +AA+ N N EV+KI W +
Sbjct: 204 EAGKKQKAPKKRRKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDS 263
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+ EEQK+ Y+ + K++Y + + AYK
Sbjct: 264 LGEEQKQVYKRKTEAAKKEYLKALAAYK 291
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R+KK E ++P Y L+ +D K +NP A F E++ I+ + W ++ E+K+ Y+
Sbjct: 215 RRKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKR 274
Query: 225 KYQAEKEAYLQVMA--KERRESEA 246
K +A K+ YL+ +A K+ +E +A
Sbjct: 275 KTEAAKKEYLKALAAYKDNQECQA 298
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 39/179 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +SA+EK +E +++K Y + M
Sbjct: 43 FVQMCRE---EHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFENMAKSDKARYDREM 99
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + K K+KDP PK P +A+F
Sbjct: 100 --------------------------------KNYVPPKGAKKGKKKDPNAPKRPPSAFF 127
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY
Sbjct: 128 LFCSEHRPEIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAY 186
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + E K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 120 KRPPSAFFLFCSEHRPEIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 179
Query: 234 LQVMAK--ERRESEAMK 248
+ +A ++ +SEA K
Sbjct: 180 EKDIAAYCDKGKSEAGK 196
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 282 KEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEI 339
K+KDP PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+
Sbjct: 2 KKKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 61
Query: 340 AKKNKEKYNEEMEAYK 355
A K KEKY +++ AY+
Sbjct: 62 AAKLKEKYEKDIAAYR 77
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 10 KRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 69
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 70 EKDIAAYR 77
>gi|70953373|ref|XP_745792.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56526224|emb|CAH87922.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 98
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DPL PK ++AY + ++R ++ + K V +V K+ GE W +T QK PYE+ A
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 341 KKNKEKYNEEMEAYKR 356
+ +K +Y++E+E YK+
Sbjct: 80 ELDKVRYSKEIEEYKK 95
>gi|392883584|gb|AFM90624.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCPERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|194466163|gb|ACF74312.1| high mobility group protein 1 [Arachis hypogaea]
Length = 139
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWK 326
++ A K+ KK KDP KPK P +A+F+F SE R +NK+V V K G+ WK
Sbjct: 17 RKGAGTGRKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVAVVGKAGGDRWK 76
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
+M++ K PY+ A+K KE+Y M+AY ++
Sbjct: 77 SMSDADKAPYQAKAEKKKEEYERTMQAYNKK 107
>gi|392876622|gb|AFM87143.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDSSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|312075672|ref|XP_003140521.1| high mobility group protein 1.2 [Loa loa]
gi|307764316|gb|EFO23550.1| high mobility group protein 1.2 [Loa loa]
Length = 211
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 48/190 (25%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPY-------EEKYQ 227
+ PY + K + E KK+ P + EI+ KWK +S +EK+ + E+YQ
Sbjct: 13 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQ 72
Query: 228 AEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL 287
AE AY D K+ + +KDP
Sbjct: 73 AEVAAY-------------------------------------GGEDALRKRKRVKKDPN 95
Query: 288 KPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
PK ++A+F FS ++R + + V +VA+ G WK + EE++ YE A ++KE
Sbjct: 96 APKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKALGEEERAVYERKALEDKE 155
Query: 346 KYNEEMEAYK 355
+Y EEM YK
Sbjct: 156 RYAEEMRNYK 165
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYF--LFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
K P++ K +F + E + +N V E++K E+WK M++++KR + E+A+
Sbjct: 6 KPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQ 65
Query: 342 KNKEKYNEEMEAY 354
K+ E+Y E+ AY
Sbjct: 66 KDAERYQAEVAAY 78
>gi|17553928|ref|NP_498375.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
gi|21903502|sp|Q09390.2|HMG12_CAEEL RecName: Full=High mobility group protein 1.2
gi|3702828|gb|AAC78599.1| high mobility group protein 1.2 [Caenorhabditis elegans]
gi|373219052|emb|CCD83369.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
Length = 235
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 34/190 (17%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY- 233
+ PY + K + E KK+ P + EI+ KWK + +EK+ + E Q + E Y
Sbjct: 49 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQ 108
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+V +AM+ K+ + +KDP PK +
Sbjct: 109 AEVSVAAYGGEDAMR-----------------------------KRKRAKKDPHAPKRAL 139
Query: 294 TAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+A+F +S ++R + A + + V +VA+ G+ WK + +E K YE+ A+ +K++Y +EM
Sbjct: 140 SAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEM 199
Query: 352 EAYKRRMKEL 361
YK M+++
Sbjct: 200 RNYKAEMQKM 209
>gi|410081503|ref|XP_003958331.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
gi|372464919|emb|CCF59196.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
Length = 95
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 274 DKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEE 331
D + + +++KDP PK ++AY F++E R + ++N +V ++ +I GE WK + E
Sbjct: 6 DTKKRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVTFGQIGRILGERWKALNAE 65
Query: 332 QKRPYEEIAKKNKEKYNEEMEAY 354
K PYE A +K++Y E E Y
Sbjct: 66 DKEPYEAKAAADKKRYESEKELY 88
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K R+KK KR Y+ + + + + ENP+ F +I ILG +WK ++AE+K+
Sbjct: 9 KRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVTFGQIGRILGERWKALNAEDKE 68
Query: 221 PYEEK-------YQAEKEAYLQVMAKE 240
PYE K Y++EKE Y+ A E
Sbjct: 69 PYEAKAAADKKRYESEKELYMATHATE 95
>gi|410961840|ref|XP_003987486.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4 [Felis catus]
Length = 623
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 272 EADKENKKPKK--EKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKN 327
EA K+ K PKK +KDP +P+ PV+AY LF + +AA+ N N EV+KI W +
Sbjct: 208 EAGKKQKAPKKRXKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDS 267
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+ EEQK+ Y+ + K++Y + + AYK
Sbjct: 268 LGEEQKQVYKRKTEAAKKEYLKALAAYK 295
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R KK E ++P Y L+ +D K +NP A F E++ I+ + W ++ E+K+ Y+
Sbjct: 219 RXKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKR 278
Query: 225 KYQAEKEAYLQVMA--KERRESEA 246
K +A K+ YL+ +A K+ +E +A
Sbjct: 279 KTEAAKKEYLKALAAYKDNQECQA 302
>gi|302790391|ref|XP_002976963.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
gi|300155441|gb|EFJ22073.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
Length = 156
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP +PK P TA+F+F E R + K V V K G+ WK +TEE+K+PY + A
Sbjct: 51 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 110
Query: 342 KNKEKYNEEMEAYKRRMKE 360
+ K Y + + YK++ +E
Sbjct: 111 QKKADYEKTLTEYKKKQEE 129
>gi|50294784|ref|XP_449803.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529117|emb|CAG62781.1| unnamed protein product [Candida glabrata]
Length = 196
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 278 KKPK------KEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEE 331
KKPK KE+DP PK P AY LF + + ++V K E WKN++E+
Sbjct: 82 KKPKTRKQKLKERDPNMPKRPTNAYLLFCEMNKEKI--KEGGSVDVTKDLTESWKNLSEQ 139
Query: 332 QKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+++PY + +++E+Y EMEAY ++ K
Sbjct: 140 ERKPYYRLYNEDRERYQAEMEAYNKKSK 167
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 13/68 (19%)
Query: 174 KRPSPPYILWCKDQWNEAKKENP-EAEFKEITNILGAKWKNVSAEEKKPY-------EEK 225
KRP+ Y+L+C E KE E ++T L WKN+S +E+KPY E+
Sbjct: 100 KRPTNAYLLFC-----EMNKEKIKEGGSVDVTKDLTESWKNLSEQERKPYYRLYNEDRER 154
Query: 226 YQAEKEAY 233
YQAE EAY
Sbjct: 155 YQAEMEAY 162
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P +PK P T YFL+ E RA++ ++ + V E+AKI E+WK + EE+K+ Y+ A
Sbjct: 23 PNRPKRPQTPYFLYLHEHRASIKEEHPDAKVTEIAKIASEQWKALGEEEKKEYQAKADAA 82
Query: 344 KEKYNEEMEAY 354
KE+Y ++ME Y
Sbjct: 83 KEQYKKDMEKY 93
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP PY L+ + K+E+P+A+ EI I +WK + EEKK Y+ K A KE Y
Sbjct: 27 KRPQTPYFLYLHEHRASIKEEHPDAKVTEIAKIASEQWKALGEEEKKEYQAKADAAKEQY 86
Query: 234 LQVMAK 239
+ M K
Sbjct: 87 KKDMEK 92
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + +N + +V K+ GE+WK ++E+ +RPYEE A
Sbjct: 19 DPNAPKRGLSAYMFFANENRDKVREENPGITFGQVGKMLGEKWKALSEDDRRPYEEKAAA 78
Query: 343 NKEKYNEEMEAY 354
+K++Y +E +Y
Sbjct: 79 DKKRYEDEKASY 90
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + ++ ++ENP F ++ +LG KWK +S ++++PYEEK A+K+ Y
Sbjct: 24 KRGLSAYMFFANENRDKVREENPGITFGQVGKMLGEKWKALSEDDRRPYEEKAAADKKRY 83
>gi|225706166|gb|ACO08929.1| Transcription factor A, mitochondrial precursor [Osmerus mordax]
Length = 297
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 101/193 (52%), Gaps = 23/193 (11%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+ + Q ++NP +F +IT + +W+ +S E+K+P+EE E+E +
Sbjct: 50 KRPLNGYMRFLNQQRPIVLRQNPAIQFVDITKKVTQQWRTLSPEQKRPFEEASAVERERF 109
Query: 234 LQVMAKERRE-SEAMKL-LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
++ + + + S A + L EE ++K A ++ + K+E + L KPK
Sbjct: 110 KVILKQYQAQLSPAQSIALAEERREKL--------------AQRKAVRKKRELNRLGKPK 155
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
P +A+ ++ +E + + + K+ E+WKN T+ QK+ Y ++++ + +Y
Sbjct: 156 RPRSAFNIYMTEH----FEEARGITFPMKMKTLSEDWKNKTDFQKQVYMQLSEDDMVRYK 211
Query: 349 EEMEAYKRRMKEL 361
E++A++ +M E+
Sbjct: 212 NEIKAWEEQMVEI 224
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 47/184 (25%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCQEEHKKKHPDASVNFSECVKKCSERWKTMSAKEKVKFEDMAKADKSRYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKE-----KDPLKPKHP 292
K N PK E KDP PK P
Sbjct: 76 -------------------------------------KTNIPPKGETEKKFKDPNVPKRP 98
Query: 293 VTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
A+FLF SE + ++ + + +VAK GE W N + K+PYE+ AK KEKY ++
Sbjct: 99 PLAFFLFCSEYHPKIKEEHPDLSIGDVAKKLGEMWNNTAADDKQPYEKAAKL-KEKYEKD 157
Query: 351 MEAY 354
+ AY
Sbjct: 158 IAAY 161
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE------EKYQ 227
KRP + L+C + + K+E+P+ ++ LG W N +A++K+PYE EKY+
Sbjct: 96 KRPPLAFFLFCSEYHPKIKEEHPDLSIGDVAKKLGEMWNNTAADDKQPYEKAAKLKEKYE 155
Query: 228 AEKEAY 233
+ AY
Sbjct: 156 KDIAAY 161
>gi|392884250|gb|AFM90957.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|392878084|gb|AFM87874.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|392877754|gb|AFM87709.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|387913840|gb|AFK10529.1| high mobility group protein B1-like protein [Callorhinchus milii]
gi|392873522|gb|AFM85593.1| high mobility group protein [Callorhinchus milii]
gi|392873780|gb|AFM85722.1| high mobility group protein [Callorhinchus milii]
gi|392873902|gb|AFM85783.1| high mobility group protein [Callorhinchus milii]
gi|392873908|gb|AFM85786.1| high mobility group protein [Callorhinchus milii]
gi|392873950|gb|AFM85807.1| high mobility group protein [Callorhinchus milii]
gi|392873998|gb|AFM85831.1| high mobility group protein [Callorhinchus milii]
gi|392874244|gb|AFM85954.1| high mobility group protein [Callorhinchus milii]
gi|392874940|gb|AFM86302.1| high mobility group protein [Callorhinchus milii]
gi|392876248|gb|AFM86956.1| high mobility group protein [Callorhinchus milii]
gi|392876254|gb|AFM86959.1| high mobility group protein [Callorhinchus milii]
gi|392876362|gb|AFM87013.1| high mobility group protein [Callorhinchus milii]
gi|392876946|gb|AFM87305.1| high mobility group protein [Callorhinchus milii]
gi|392877468|gb|AFM87566.1| high mobility group protein [Callorhinchus milii]
gi|392877522|gb|AFM87593.1| high mobility group protein [Callorhinchus milii]
gi|392877744|gb|AFM87704.1| high mobility group protein [Callorhinchus milii]
gi|392879776|gb|AFM88720.1| high mobility group protein [Callorhinchus milii]
gi|392880382|gb|AFM89023.1| high mobility group protein [Callorhinchus milii]
gi|392880776|gb|AFM89220.1| high mobility group protein [Callorhinchus milii]
gi|392881032|gb|AFM89348.1| high mobility group protein [Callorhinchus milii]
gi|392881292|gb|AFM89478.1| high mobility group protein [Callorhinchus milii]
gi|392881318|gb|AFM89491.1| high mobility group protein [Callorhinchus milii]
gi|392883640|gb|AFM90652.1| high mobility group protein [Callorhinchus milii]
gi|392883646|gb|AFM90655.1| high mobility group protein [Callorhinchus milii]
gi|392883680|gb|AFM90672.1| high mobility group protein [Callorhinchus milii]
gi|392883988|gb|AFM90826.1| high mobility group protein [Callorhinchus milii]
gi|392884098|gb|AFM90881.1| high mobility group protein [Callorhinchus milii]
gi|392884156|gb|AFM90910.1| high mobility group protein [Callorhinchus milii]
gi|392884178|gb|AFM90921.1| high mobility group protein [Callorhinchus milii]
gi|392884306|gb|AFM90985.1| high mobility group protein [Callorhinchus milii]
gi|392884308|gb|AFM90986.1| high mobility group protein [Callorhinchus milii]
gi|392884314|gb|AFM90989.1| high mobility group protein [Callorhinchus milii]
gi|392884420|gb|AFM91042.1| high mobility group protein [Callorhinchus milii]
gi|392884450|gb|AFM91057.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|71986268|ref|NP_001022599.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
gi|373219053|emb|CCD83370.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
Length = 234
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 34/190 (17%)
Query: 177 SPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY- 233
+ PY + K + E KK+ P + EI+ KWK + +EK+ + E Q + E Y
Sbjct: 48 TSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQ 107
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+V +AM+ K+ + +KDP PK +
Sbjct: 108 AEVSVAAYGGEDAMR-----------------------------KRKRAKKDPHAPKRAL 138
Query: 294 TAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
+A+F +S ++R + A + + V +VA+ G+ WK + +E K YE+ A+ +K++Y +EM
Sbjct: 139 SAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEM 198
Query: 352 EAYKRRMKEL 361
YK M+++
Sbjct: 199 RNYKAEMQKM 208
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 273 ADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTE 330
A++ K +K+KDP PK ++AY F++E+R + ++N + E+ K+ GE+WK +
Sbjct: 633 AERRTKTGRKKKDPNAPKRSLSAYMFFANEQRDIVRSENPGIQFGEIGKLLGEKWKALDA 692
Query: 331 EQKRPYEEIAKKNKEKYN-EEMEAYKRRMKE 360
E K PYE A+++K++Y E+ E +K++ +E
Sbjct: 693 EGKAPYESKAEEDKKRYELEKAEYFKKQHEE 723
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 164 DRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE 223
RKKK KR Y+ + +Q + + ENP +F EI +LG KWK + AE K PYE
Sbjct: 640 GRKKKDPNAPKRSLSAYMFFANEQRDIVRSENPGIQFGEIGKLLGEKWKALDAEGKAPYE 699
Query: 224 EKYQAEKEAY 233
K + +K+ Y
Sbjct: 700 SKAEEDKKRY 709
>gi|392881066|gb|AFM89365.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|392876068|gb|AFM86866.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y EM Y
Sbjct: 64 AKNDKVRYGREMRNY 78
>gi|392883682|gb|AFM90673.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|392878832|gb|AFM88248.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ ++Y F S E D+ + E +K E WK MT + K +E +
Sbjct: 4 RDPRQPRGKTSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEGL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|426215132|ref|XP_004001831.1| PREDICTED: high mobility group protein B4 [Ovis aries]
Length = 196
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 18 YIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M L K++ +DP P+ P +++
Sbjct: 69 DKARYQEEMMNYLGRRKKRRK-------------------------RDPHAPRRPPSSFL 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L ++N + V++VAK +G+ W T+ K+PYE+ A + KY EE+ Y+
Sbjct: 104 LFCQDHYAQLKSENPSWSVVQVAKASGKMWSAKTDVDKQPYEQRAALLRAKYREELSVYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 NQFK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEEI 339
+D LKPK V++Y F R N E ++ E+W+++++ +K YE +
Sbjct: 6 RDHLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEAL 65
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y EEM Y
Sbjct: 66 AKLDKARYQEEMMNY 80
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK 225
+RP ++L+C+D + + K ENP ++ G W + +K+PYE++
Sbjct: 96 RRPPSSFLLFCQDHYAQLKSENPSWSVVQVAKASGKMWSAKTDVDKQPYEQR 147
>gi|432844326|ref|XP_004065714.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Oryzias latipes]
Length = 425
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y Y+AEK
Sbjct: 70 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYEAEKIEYNESMK 129
Query: 231 -----EAYLQ-VMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKE 283
AYL V AK R E+ LEEE +Q+ + ++ E Y+ + D P
Sbjct: 130 AYHNSPAYLAYVNAKGRAEA----ALEEESRQRQSRLDKGEPYMSIQPAED-----PDDY 180
Query: 284 KDPLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
D KH A F L S +++ D ++V+ A++
Sbjct: 181 DDGFSIKHTAAARFQRNHRLISEILSESVVPDVRSVVTTARM 222
>gi|392873666|gb|AFM85665.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|195448286|ref|XP_002071591.1| GK25058 [Drosophila willistoni]
gi|194167676|gb|EDW82577.1| GK25058 [Drosophila willistoni]
Length = 406
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 36/202 (17%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVS 215
++ + D K +G R ++ C++ E KK++P+ F E + +WK +
Sbjct: 178 IRGGKADAKPRG---RMTAYAYFVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMV 231
Query: 216 AEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADK 275
+EKK + E AEK+ K+R E+E ++ Y+ K
Sbjct: 232 DKEKKRFHE--MAEKD-------KQRYETE-----------------MQNYVPPKGAVVG 265
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQK 333
KK K+ KDP PK ++A+F F ++ R + A N V ++AK G +W ++ E K
Sbjct: 266 RGKKRKQMKDPNAPKRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEVK 325
Query: 334 RPYEEIAKKNKEKYNEEMEAYK 355
+ YE +A+++K +Y EM YK
Sbjct: 326 QKYESMAERDKARYEREMTEYK 347
>gi|198282001|ref|NP_001123683.1| transcription factor A, mitochondrial precursor [Sus scrofa]
gi|75052621|sp|Q5D144.1|TFAM_PIG RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|60326706|gb|AAX18878.1| mitochondrial transcription factor A [Sus scrofa]
Length = 246
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 99/189 (52%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + W+ + EKK YE+ Y+A+ + Y
Sbjct: 51 KKPMTSYVRFSKEQLPIFKAQNPDAKNSELIKKIAELWRELPDSEKKIYEDAYRADWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
E + ++E+ + L ++ +Q + K+ K+E L KPK P
Sbjct: 111 ----------KEEVNRIQEQLTPSQMVSLEKEIMQ--KRLKKKALIKKRELTMLGKPKRP 158
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+AY +F +ER D + +++ K E WKN++ QK+ Y ++A+ +K +Y EM+
Sbjct: 159 RSAYNIFIAERFQE-AKDGPSQVKL-KTINENWKNLSSSQKQVYIQLAEDDKVRYYNEMK 216
Query: 353 AYKRRMKEL 361
+++ +M E+
Sbjct: 217 SWEEQMVEV 225
>gi|392883678|gb|AFM90671.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ + +Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMFSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|392883818|gb|AFM90741.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + ++PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGIFIGDVAKKMGELWSGLTAKDEKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A+++KPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIFIGDVAKKMGELWSGLTAKDEKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRIY 78
>gi|335308835|ref|XP_003361389.1| PREDICTED: high mobility group protein B4-like [Sus scrofa]
Length = 198
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE + +K Y
Sbjct: 18 YIHFLLNYSNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDKARY---- 73
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+EE + K+ ++++DP P+ P +++
Sbjct: 74 -------------QEEMRNYVG-----------------GKRKRRKRDPQAPRRPPSSFL 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N N V +VAK + W T+ K+PYE+ A + KY+EE+ Y+
Sbjct: 104 LFCQDNYAQLKRENPNWSVAQVAKASARMWSTTTDVDKQPYEQRAALLRAKYHEELSVYQ 163
Query: 356 RRM 358
++
Sbjct: 164 KQF 166
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
R+K+ +RP ++L+C+D + + K+ENP ++ W + +K+PYE+
Sbjct: 87 RRKRDPQAPRRPPSSFLLFCQDNYAQLKRENPNWSVAQVAKASARMWSTTTDVDKQPYEQ 146
Query: 225 K 225
+
Sbjct: 147 R 147
>gi|62087576|dbj|BAD92235.1| high-mobility group box 1 variant [Homo sapiens]
Length = 176
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 36/161 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 18 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 73
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 74 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFF 105
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
LF SE R + ++ + +VAK GE W N + K+PY
Sbjct: 106 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 146
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 98 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 157
Query: 234 LQV 236
+V
Sbjct: 158 EKV 160
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E WK M+ ++K +E++A
Sbjct: 7 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 66
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y EM+ Y
Sbjct: 67 KADKARYEREMKTY 80
>gi|392876202|gb|AFM86933.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
>gi|395820949|ref|XP_003783817.1| PREDICTED: transcription factor A, mitochondrial [Otolemur
garnettii]
Length = 422
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 21/192 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q + +NP+ + E+ + W+ + EKK YE++ +A EAY
Sbjct: 229 KKPMSSYLRFSKEQLPIIRAQNPDVKNTELIKKIAELWRKLPDSEKKIYEDESRAAWEAY 288
Query: 234 LQVMAK--ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKH 291
+ + K E+ + LE+E QK L ++ L K+E KPK
Sbjct: 289 KEEINKIQEQLTPSQIVSLEKEIMQK---RLKKKALIKKRELTILG----------KPKR 335
Query: 292 PVTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P TAY +F SE D ++ AK+ E WKNM+ QK+ Y + AK +K +Y
Sbjct: 336 PRTAYNIFVSE----CFQDARDDSSQAKLKTINEAWKNMSSSQKQVYFQFAKDDKIRYEN 391
Query: 350 EMEAYKRRMKEL 361
EM++++ +M E+
Sbjct: 392 EMKSWEEQMIEV 403
>gi|224083306|ref|XP_002306980.1| high mobility group family [Populus trichocarpa]
gi|222856429|gb|EEE93976.1| high mobility group family [Populus trichocarpa]
Length = 160
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKR 334
K K KDP KPK P +A+F+F E R + NK+V V K G++WK+++E +K
Sbjct: 33 KSGKAAKDPNKPKRPASAFFVFMEEFREQYKREHPKNKSVAAVGKAGGDKWKSLSEAEKA 92
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
P+ A K K +Y ++M+AY
Sbjct: 93 PFVAKADKRKVEYEKKMKAY 112
>gi|123368|sp|P07156.1|HMGB1_CRIGR RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|49483|emb|CAA68441.1| high mobility group protein [Cricetulus griseus]
Length = 180
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 34/162 (20%)
Query: 200 FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTA 259
F E + +WK +SA+EK +E+ +A+K Y E + KT
Sbjct: 3 FSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY-------------------EREMKT- 42
Query: 260 MELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEV 317
Y+ K E KK KDP PK P +A+FLF SE R + ++ + +V
Sbjct: 43 ------YIPPKGETK------KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDV 90
Query: 318 AKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
AK GE W N + K+PYE+ A K KEKY +++ AY+ + K
Sbjct: 91 AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 132
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 61 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 120
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 121 EKDIAAYR 128
>gi|149689894|ref|XP_001503432.1| PREDICTED: transcription factor A, mitochondrial-like [Equus
caballus]
Length = 246
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 23/193 (11%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q + +NP+A+ E+ + W+ + EKK YE+ Y+A+ +AY
Sbjct: 51 KKPMTSYVRFSKEQLPIFRAQNPDAKNSELIKKIAQVWRELPDSEKKIYEDAYRADWQAY 110
Query: 234 LQVMAK--ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
+ + + E+ M LE+E QK + K++A + K+E L KPK
Sbjct: 111 KEEINRLQEQLTPSQMVSLEKEITQK----------RLKKKALIK----KRELTMLGKPK 156
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
P +AY +F SE + K+ K+ E WKN++ QK+ Y ++A +K +Y
Sbjct: 157 RPRSAYNIFISE----CFQEAKDGPSQVKLKTVNENWKNLSSSQKQVYIQLANDDKIRYY 212
Query: 349 EEMEAYKRRMKEL 361
EM++++ +M E+
Sbjct: 213 NEMKSWEEQMIEV 225
>gi|221045048|dbj|BAH14201.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 36/161 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
LF SE R + ++ + +VAK GE W N + K+PY
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQV 236
+V
Sbjct: 156 EKV 158
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E WK M+ ++K +E++A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y EM+ Y
Sbjct: 65 KADKARYEREMKTY 78
>gi|402221853|gb|EJU01921.1| HMG-box [Dacryopinax sp. DJM-731 SS1]
Length = 128
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
KKEKDP PK + Y +F + R + +N E+ +I + WKN++E+ K PY+ +
Sbjct: 44 KKEKDPNAPKGAKSPYIIFCQDNREEAKKEAENTREIMRILADMWKNLSEQDKEPYKAKS 103
Query: 341 KKNKEKYNEEMEAYK 355
+K+K ++ EM+AYK
Sbjct: 104 QKDKTRFEREMKAYK 118
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
PYI++C+D EAKKE +EI IL WKN+S ++K+PY+ K Q +K + + M
Sbjct: 58 PYIIFCQDNREEAKKE--AENTREIMRILADMWKNLSEQDKEPYKAKSQKDKTRFEREM 114
>gi|254580675|ref|XP_002496323.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
gi|238939214|emb|CAR27390.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
Length = 98
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N +V +V +I GE+WK +T ++K PYE A+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRAENPDVTFGQVGRILGEKWKALTPDEKTPYEAKAEA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP+ F ++ ILG KWK ++ +EK PYE K +A+K+ Y
Sbjct: 22 KRALSAYMFFANENRDIVRAENPDVTFGQVGRILGEKWKALTPDEKTPYEAKAEADKKRY 81
>gi|359481228|ref|XP_002268056.2| PREDICTED: uncharacterized protein LOC100267058 [Vitis vinifera]
gi|297735531|emb|CBI18025.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 87/149 (58%), Gaps = 13/149 (8%)
Query: 19 SRRALKPKNSLAN-EAVVMAQTPSQSPIPNPPDAGLSKENHESLSQPKKAAAKGKAKQAT 77
R+ L+P+N A+ ++V + P I D+ +KENH P + +
Sbjct: 19 GRKPLRPRNISADLDSVQIKAKPEWIEISRVADS--NKENHPVYVTPVRMES-------- 68
Query: 78 KKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLHMEL 137
D S ++L +++ E++K+E +K E++L+E+D ++ M +E++ +G+EQ+KL ME+
Sbjct: 69 --FDASLAEELSAVRKRRERLKIEGDKVEKMLRERDLVMGMWMKEVKQRGEEQKKLEMEV 126
Query: 138 KKLQKMKEFKPNMTLPIVQCLKDKEQDRK 166
+L ++KE + + + ++ L+++E+++K
Sbjct: 127 DRLYRLKELRSAVRISPIRPLREREREKK 155
>gi|444721179|gb|ELW61931.1| High mobility group protein B1 [Tupaia chinensis]
Length = 212
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + + K +SA+EK +E+ + +K Y
Sbjct: 16 YAFFVQTCREEPKKKHPDASVNFSEFSKTCSERGKTMSAKEKGKFEDMAKVDKAGY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + ++AK GE W N + K+PYE+ A K KEKY + + AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSMGDIAKKLGELWNNTAADGKQPYEKKAAKLKEKYEKNIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P +I LG W N +A+ K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSMGDIAKKLGELWNNTAADGKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKNIAAYR 163
>gi|422294533|gb|EKU21833.1| nucleosome binding protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 195
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY LF+ R A+ A+ V E++K+ GE W+ ++ E+K+ +E+ A
Sbjct: 33 DPNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAAS 92
Query: 343 NKEKYNEEMEAY 354
K +Y EE+ AY
Sbjct: 93 AKVRYGEELRAY 104
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
Y+L+ + K E P + EI+ ++G +W+ +SAEEKK +E++ + K Y
Sbjct: 44 YMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAASAKVRY 97
>gi|296224352|ref|XP_002758030.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390474708|ref|XP_003734829.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 215
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK + +F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRTPSVFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 41/184 (22%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 19 FVQTCRE---EHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+++ +K+PY A K EKY +++ YK
Sbjct: 102 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLXEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K NP ++ LG W N+S EK+PY
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPY 142
>gi|348575684|ref|XP_003473618.1| PREDICTED: transcription factor A, mitochondrial-like [Cavia
porcellus]
Length = 248
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 13/194 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP+ Y + K++ + + +NP + EI LG +WK + EKK YE+ Y+ E +AY
Sbjct: 51 KRPANAYARFLKEKLSITRAQNPGTKITEIMRRLGEQWKELPDAEKKIYEDAYKEEWKAY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL----KP 289
+ + R +E + L E ++ + Q+ A ++ + L KP
Sbjct: 111 KE---ERNRINETLSLSERAVLAQSIIASCVSSDQWGSLALLVSQAALWKGLELLTLGKP 167
Query: 290 KHPVTAYFLFSSERRAALLADNKNVLEVAKITG--EEWKNMTEEQKRPYEEIAKKNKEKY 347
K P TAY ++ +E + D + AK E WKN+++ QK+ YE++A+ +K +Y
Sbjct: 168 KRPRTAYNIYLAE----YIPDCEATTIQAKWKSAYENWKNLSDSQKQVYEQLAEDDKIRY 223
Query: 348 NEEMEAYKRRMKEL 361
E+++++ +M E+
Sbjct: 224 RNEIKSWEEQMIEV 237
>gi|205780950|sp|B2RPK0.1|HGB1A_HUMAN RecName: Full=Putative high mobility group protein B1-like 1;
AltName: Full=High mobility group protein B1 pseudogene
1; AltName: Full=Putative high mobility group protein
1-like 1; Short=HMG-1L1
gi|187950665|gb|AAI37483.1| High-mobility group box 1-like 1 [Homo sapiens]
gi|187953577|gb|AAI37484.1| High-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 35/182 (19%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
++ C+++ ++ K + F E +N +WK +SA+EK +E+ +A+K Y
Sbjct: 19 FVQTCREE-HKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMAKADKTHY------ 71
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
ER+ ++ Y+ K E K K KDP PK P +A+FLF
Sbjct: 72 ERQ--------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFFLF 105
Query: 300 SSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
SE + ++ + +VAK GE W N + K+P E+ A K KEKY +++ AY+ +
Sbjct: 106 CSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAK 165
Query: 358 MK 359
K
Sbjct: 166 GK 167
>gi|388497798|gb|AFK36965.1| unknown [Medicago truncatula]
Length = 170
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN---VLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F + R A+N N V V K G +WK++T+ +K PYE A
Sbjct: 47 DPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGGKWKSLTKAEKAPYEAKAV 106
Query: 342 KNKEKYNEEMEAY 354
K K +Y + M+AY
Sbjct: 107 KRKVEYEKLMDAY 119
>gi|109001746|ref|XP_001107984.1| PREDICTED: high mobility group protein B4-like [Macaca mulatta]
gi|67968844|dbj|BAE00779.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 18 YIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + K++ +DP P+ P +++
Sbjct: 69 DKARYQEEMMNYVGKRKKRRK-------------------------RDPQAPRRPPSSFL 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N + V++VAK TG+ W T+ +K PYE+ A + KY EE+E Y+
Sbjct: 104 LFCQDHYAQLKRENPSWSVVQVAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELELYR 163
Query: 356 RRMKEL 361
++ K+
Sbjct: 164 KQRKQC 169
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 96 RRPPSSFLLFCQDHYAQLKRENPSWSVVQVAKATGKMWSATTDLEKHPYEQRAALLRAKY 155
Query: 234 ---LQVMAKERRESEAMK 248
L++ K+R++ A K
Sbjct: 156 FEELELYRKQRKQCNARK 173
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP PK ++AY F++E+R + +N + +V K+ GE WK + E+Q+ PYE A
Sbjct: 19 KDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAA 78
Query: 342 KNKEKYNEEMEAY 354
+K++Y +E +AY
Sbjct: 79 ADKKRYEDEKQAY 91
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ +LG +WK ++ +++ PYE K A+K+ Y
Sbjct: 25 KRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRY 84
>gi|260166759|gb|ACX32991.1| RE09522p [Drosophila melanogaster]
Length = 411
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 207 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 255
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 256 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 297
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 298 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 357
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 290 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 349
>gi|66523545|ref|XP_625193.1| PREDICTED: high mobility group protein 20A-like isoform 1 [Apis
mellifera]
Length = 329
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRP 335
K+ K +D PK P+T YF F ++RR + ++N + E+ K+ EW + +QK+
Sbjct: 72 KRKKTPRDATAPKQPLTGYFRFLNDRREKVRSENPTLSFAEITKLLASEWSTLPADQKQQ 131
Query: 336 YEEIAKKNKEKYNEEMEAYK 355
Y + A+++KE+YN E YK
Sbjct: 132 YLDAAEQDKERYNREFSDYK 151
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 146 FKPNMTLPIVQCLKDKEQDRKKK------GCAERKRPSPPYILWCKDQWNEAKKENPEAE 199
K N PI+ +R KK K+P Y + D+ + + ENP
Sbjct: 50 IKKNNVTPIIGSNNTNTTNRAKKRKKTPRDATAPKQPLTGYFRFLNDRREKVRSENPTLS 109
Query: 200 FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEE 252
F EIT +L ++W + A++K+ Y + + +KE Y + + + +++EA +L E
Sbjct: 110 FAEITKLLASEWSTLPADQKQQYLDAAEQDKERYNREFS-DYKQTEAYRLFSE 161
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 36/188 (19%)
Query: 179 PYILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQV 236
PY L+ + + KK++P +FK + +WKN++A+EKK +E+ +KE Y
Sbjct: 554 PYALFLQSMHADQKKKHPSVTLDFKTFSKECSEQWKNLTAKEKKKFEDLAAKDKERY--- 610
Query: 237 MAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAY 296
R+E ++ ++ AD E K K++KDP PK ++A+
Sbjct: 611 ----RKEMQS----------------------YEPPAD-EGKSRKRKKDPNAPKKALSAF 643
Query: 297 FLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
FLF ++ R + AD+ + V E+AK G+ W+ T + K YE A+ K++Y + +
Sbjct: 644 FLFCNDERPKVKADHPDWKVSEIAKELGKRWE--TCKNKSKYESQAQVEKQRYEKALPGP 701
Query: 355 KRRMKELL 362
+R +L
Sbjct: 702 RRAFTYVL 709
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 284 KDPLKPKHPVTAYFLFSSERRA-------ALLADNKNVLEVAKITGEEWKNMTEEQKRPY 336
KD KPK +T Y LF A ++ D K +K E+WKN+T ++K+ +
Sbjct: 543 KDKSKPKGALTPYALFLQSMHADQKKKHPSVTLDFKTF---SKECSEQWKNLTAKEKKKF 599
Query: 337 EEIAKKNKEKYNEEMEAY 354
E++A K+KE+Y +EM++Y
Sbjct: 600 EDLAAKDKERYRKEMQSY 617
>gi|149043807|gb|EDL97258.1| transcription factor A, mitochondrial, isoform CRA_b [Rattus
norvegicus]
gi|149043808|gb|EDL97259.1| transcription factor A, mitochondrial, isoform CRA_b [Rattus
norvegicus]
Length = 192
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 103/185 (55%), Gaps = 19/185 (10%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+ + +Q + K ++P+A+ E+ + A W+ + EKK YE ++AE + Y + ++K
Sbjct: 4 YLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVYKEAVSK 63
Query: 240 ERRESEAMKL--LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHPVTAY 296
+ + +L LE+E +QK L++ Q K ++E L KPK P +AY
Sbjct: 64 YKEQLTPSQLMGLEKEARQKR----LKKKAQIK----------RRELILLGKPKRPRSAY 109
Query: 297 FLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
++ SE + A +++ K+ + WKN++ ++K+ Y ++AK ++ +Y+ EM++++
Sbjct: 110 NIYVSE--SFQEAKDESAQGKLKLVNQAWKNLSHDEKQAYIQLAKDDRIRYDNEMKSWEE 167
Query: 357 RMKEL 361
+M E+
Sbjct: 168 QMAEV 172
>gi|340724328|ref|XP_003400534.1| PREDICTED: high mobility group protein 20A-like [Bombus terrestris]
Length = 329
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV 314
K TA + + A K K P+ D PK P+T YF F ++RR + +N +
Sbjct: 52 KNNTASAVASNTINTTNRAKKRKKVPR---DATAPKQPLTGYFRFLNDRREKVRTENPTL 108
Query: 315 --LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
E+ K+ EW + +QK+ Y + A+++KE+YN E YK+
Sbjct: 109 SFAEITKLLASEWSTLPADQKQQYLDAAEQDKERYNREFSDYKQ 152
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y + D+ + + ENP F EIT +L ++W + A++K+ Y + + +KE Y
Sbjct: 84 KQPLTGYFRFLNDRREKVRTENPTLSFAEITKLLASEWSTLPADQKQQYLDAAEQDKERY 143
Query: 234 LQVMAKERRESEAMKLLEE 252
+ + + +++EA +L E
Sbjct: 144 NREFS-DYKQTEAYRLFSE 161
>gi|389585513|dbj|GAB68243.1| high mobility group protein [Plasmodium cynomolgi strain B]
Length = 107
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 260 MELLEQYLQFKQEADKENKKPKK-EKDPLKPKHPVTAYFLFSSERRAALLADN----KNV 314
M+ ++++ K KE +K +K +KDP PK ++AY F+ E+RA +++ + K+V
Sbjct: 1 MDPMKKFNGMKNMGGKEVRKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDV 60
Query: 315 LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY-NEEMEAYKRRMK 359
V K+ GE W + E +K PYE+ A+++K +Y E++E K +MK
Sbjct: 61 ATVGKMIGEAWNKLDELEKAPYEKKAQEDKVRYEREKVEYAKTKMK 106
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEE 338
K +KDP KPK ++AY FS + R + A+N EV K+ G +WK + EE+K+PY E
Sbjct: 23 KGKKDPNKPKRALSAYMFFSQDWRDRIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYVE 82
Query: 339 IAKKNKEKYNEEMEAY 354
A K+K + E AY
Sbjct: 83 QASKDKTRAEEAKAAY 98
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK 230
KR Y+ + +D + K ENP+A F E+ +LGAKWK + EEKKPY E+ +K
Sbjct: 32 KRALSAYMFFSQDWRDRIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYVEQASKDK 88
>gi|388854657|emb|CCF51814.1| probable NHP6B-nonhistone chromosomal protein [Ustilago hordei]
Length = 99
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEE 338
K +KDP PK P++AY FS ++R + ADN +V ++ G WK M++ +K+PY +
Sbjct: 20 KSKKDPAAPKRPLSAYMFFSQDQRERVKADNPEAGFGDVGRLLGARWKEMSDAEKKPYND 79
Query: 339 IAKKN 343
+A ++
Sbjct: 80 MANRD 84
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K + KK A KRP Y+ + +DQ K +NPEA F ++ +LGA+WK +S EKK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDQRERVKADNPEAGFGDVGRLLGARWKEMSDAEKK 75
Query: 221 PYEE 224
PY +
Sbjct: 76 PYND 79
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+E+ +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEEGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|198469582|ref|XP_001355062.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
gi|198146939|gb|EAL32118.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
Length = 393
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 39/211 (18%)
Query: 149 NMTLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPE--AEFKEITNI 206
N P+V+ K D K +G R ++ C++ E KK++P+ F E +
Sbjct: 163 NSASPMVRGGK---ADAKPRG---RMTAYAYFVQTCRE---EHKKKHPDETVIFAEFSRK 213
Query: 207 LGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQY 266
+WK + +EKK + E AEK+ K+R E+E ++ Y
Sbjct: 214 CAERWKTMVDKEKKRFHE--MAEKD-------KQRYEAE-----------------MQNY 247
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEE 324
+ K KK K+ KDP PK ++A+F F ++ R + A N V ++AK G +
Sbjct: 248 VPPKGTVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRK 307
Query: 325 WKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 308 WSDVDPEVKQKYESMAERDKARYEREMTEYK 338
>gi|68061725|ref|XP_672863.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|68076125|ref|XP_679982.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490279|emb|CAI01706.1| high mobility group protein, putative [Plasmodium berghei]
gi|56500842|emb|CAH99000.1| hypothetical protein PB001601.02.0 [Plasmodium berghei]
Length = 98
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DPL PK ++AY + ++R ++ + K V +V K+ GE W +T QK PYE+ A
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 341 KKNKEKYNEEMEAYKR 356
+ +K +Y++E+E Y++
Sbjct: 80 ELDKVRYSKEIEEYRK 95
>gi|195393910|ref|XP_002055595.1| GJ19445 [Drosophila virilis]
gi|194150105|gb|EDW65796.1| GJ19445 [Drosophila virilis]
Length = 403
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 196 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 244
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 245 -KQRYETE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 286
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 287 WFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 346
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 279 KRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 338
>gi|440799970|gb|ELR21013.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 174
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK KD +PK P+T+Y F + RA ++ + +EVAK G W+ +++E K+PY +
Sbjct: 90 KKVKDANEPKRPMTSYLHFCAASRAEVVKKQPELKGIEVAKALGAMWRELSDEGKKPYID 149
Query: 339 IAKKNKEKYNEEMEAYKRRM 358
++ +K++Y +EM+ YK +
Sbjct: 150 LSAGDKKRYEKEMDTYKSGI 169
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
+K K E KRP Y+ +C E K+ PE + E+ LGA W+ +S E KKPY +
Sbjct: 90 KKVKDANEPKRPMTSYLHFCAASRAEVVKKQPELKGIEVAKALGAMWRELSDEGKKPYID 149
Query: 225 KYQAEKEAY 233
+K+ Y
Sbjct: 150 LSAGDKKRY 158
>gi|402853838|ref|XP_003891595.1| PREDICTED: high mobility group protein B4 [Papio anubis]
Length = 191
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 18 YIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + K++ +DP P+ P +++
Sbjct: 69 DKARYQEEMMNYVGKRKKRRK-------------------------RDPQAPRRPPSSFL 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N + V++VAK TG+ W T+ +K PYE+ A + KY EE+E Y+
Sbjct: 104 LFCQDHYAQLKRENPSWSVVQVAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELERYR 163
Query: 356 RRMKEL 361
++ K+
Sbjct: 164 KQRKQC 169
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 96 RRPPSSFLLFCQDHYAQLKRENPSWSVVQVAKATGKMWSATTDLEKHPYEQRAALLRAKY 155
Query: 234 LQVMAKERRE 243
+ + + R++
Sbjct: 156 FEELERYRKQ 165
>gi|451996730|gb|EMD89196.1| hypothetical protein COCHEDRAFT_1107529 [Cochliobolus
heterostrophus C5]
Length = 105
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E+R + DN + EV K+ GE+WK + ++Q++PYE A
Sbjct: 23 DPNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNDKQRQPYEAKAAL 82
Query: 343 NKEKYNEEMEAY 354
+K++Y +E AY
Sbjct: 83 DKKRYEQEKAAY 94
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK-------Y 226
KR Y+ + +Q + +++NP +F E+ +LG KWK ++ ++++PYE K Y
Sbjct: 28 KRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNDKQRQPYEAKAALDKKRY 87
Query: 227 QAEKEAY 233
+ EK AY
Sbjct: 88 EQEKAAY 94
>gi|221329973|ref|NP_001138203.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
gi|220901792|gb|ACL82935.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
Length = 397
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 193 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 241
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 242 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 283
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 284 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 343
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 276 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 335
>gi|392340368|ref|XP_003754052.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392347889|ref|XP_003749961.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------MKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ + +VAK GE W N + K+P E+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPCEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|221059780|ref|XP_002260535.1| High mobility group protein [Plasmodium knowlesi strain H]
gi|193810609|emb|CAQ42507.1| High mobility group protein, putative [Plasmodium knowlesi strain
H]
Length = 104
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQK 333
K+ K +KDP PK ++AY F+ E+RA +++ + K+V V K+ GE W + E +K
Sbjct: 17 KRRKNKKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLDEREK 76
Query: 334 RPYEEIAKKNKEKY-NEEMEAYKRRMK 359
PYE+ A+++K +Y E++E K +MK
Sbjct: 77 APYEKKAQEDKVRYEREKVEYAKTKMK 103
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + NE K++ P FKE + KW+++S EK YE L +
Sbjct: 18 YIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + K++ +DP P+ P +++
Sbjct: 69 DKARYQEEMMNYVGKRKKRRK-------------------------RDPQAPRRPPSSFL 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N + V++VAK TG+ W + +K PYE+ A + KY EE+E Y+
Sbjct: 104 LFCQDHYAQLKRENPSWSVVQVAKATGKMWSATADLEKHPYEQRAALLRAKYFEELELYR 163
Query: 356 RRMKEL 361
++ K+
Sbjct: 164 KQQKQC 169
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK 225
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++
Sbjct: 96 RRPPSSFLLFCQDHYAQLKRENPSWSVVQVAKATGKMWSATADLEKHPYEQR 147
>gi|426328852|ref|XP_004065350.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4
[Gorilla gorilla gorilla]
Length = 186
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 36/164 (21%)
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
N FKE + KW+++S EK YE L + K R + E M + +
Sbjct: 33 NTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKLDKARYQEEMMNYVGKRK 83
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN- 313
K++ +DP P+ P +++ LF + A L +N N
Sbjct: 84 KRRK-------------------------RDPQAPRRPPSSFLLFCQDHYAQLKRENPNW 118
Query: 314 -VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
V++VAK TG+ W T+ +K PYE+ + KY EE+E Y++
Sbjct: 119 SVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRK 162
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKY 153
Query: 234 LQVMAKERRESEAMK 248
+ + R++ A K
Sbjct: 154 FEELELYRKQCNARK 168
>gi|405977513|gb|EKC41956.1| High mobility group protein B3 [Crassostrea gigas]
Length = 202
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEE 338
K K D KPK P +AYF F ++ R + + + E+ K+ GE W+N+ + +K+P+E+
Sbjct: 89 KGKDPNDAGKPKRPQSAYFCFLADFRLKMKGKDIDHKEIIKMAGEAWRNLDDNEKKPFEK 148
Query: 339 IAKKNKEKYNEEMEAYKR 356
+A+K +EKY + + +++
Sbjct: 149 LAQKEQEKYEQALSDWRK 166
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGE---EWKNMTEEQ 332
E + +K KDP +PK +AYF F S+ R K + ++A+ T E +W M E+
Sbjct: 7 EGSRKRKAKDPNRPKRATSAYFFFLSKMREDSKKAGKPITKIAEFTKECSAKWAKMNEKD 66
Query: 333 KRPYEEIAKKNKEKYNEEMEAYK 355
K P+ + A +K +Y+ EM YK
Sbjct: 67 KEPFAKKALTDKNRYDAEMAIYK 89
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y + D K + + + KEI + G W+N+ EKKP+E+ Q E+E Y
Sbjct: 100 KRPQSAYFCFLAD--FRLKMKGKDIDHKEIIKMAGEAWRNLDDNEKKPFEKLAQKEQEKY 157
Query: 234 LQVMAKERRESEA 246
Q ++ R+
Sbjct: 158 EQALSDWRKGGGG 170
>gi|407263446|ref|XP_003084790.3| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 424
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 27 FVQTCRE---EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAHY---- 79
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E K KT + + ++ KK KDP PK P A+F
Sbjct: 80 ---------------ERKMKTYIPPPKGEIK------------KKFKDPNAPKRPPLAFF 112
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 113 LFYSEYYPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 172
Query: 356 RRMK 359
+ K
Sbjct: 173 AKGK 176
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP PK P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNAPKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +V K GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVPKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P + +FLFSSE R + + N V +VAK GE W N+ + +K+PY A K
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAK 125
Query: 343 NKEKYNEEMEAYKRRMK 359
KEKY +++ K + K
Sbjct: 126 LKEKYEKDVADSKSKGK 142
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 274 DKENKKPKKEK-DPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTE 330
D + KK ++ K DP PK ++AY FS ++R + +N + E+ KI GE WK ++E
Sbjct: 17 DNDTKKARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKASFGEIGKILGERWKALSE 76
Query: 331 EQKRPYEEIAKKNKEKYNEEMEA 353
E+K+PY + A+ +K++Y +E A
Sbjct: 77 EEKKPYLKKAEDDKKRYEDEKAA 99
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 161 KEQDRKKKGCAERKRPSPP------YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNV 214
K+ + KK +K PS P Y+ + +DQ K+ENP+A F EI ILG +WK +
Sbjct: 15 KDDNDTKKARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKASFGEIGKILGERWKAL 74
Query: 215 SAEEKKPYEEKYQAEKEAY 233
S EEKKPY +K + +K+ Y
Sbjct: 75 SEEEKKPYLKKAEDDKKRY 93
>gi|110808604|gb|ABB22048.1| HMBG4 [Homo sapiens]
gi|119627858|gb|EAX07453.1| high-mobility group box 4 [Homo sapiens]
Length = 186
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 36/164 (21%)
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
N FKE + KW+++S EK YE L + K R + E M + +
Sbjct: 33 NTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKLDKARYQEEMMNYVGKRK 83
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN- 313
K++ +DP P+ P +++ LF + A L +N N
Sbjct: 84 KRRK-------------------------RDPQAPRRPPSSFLLFCQDHYAQLKRENPNW 118
Query: 314 -VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
V++VAK TG+ W T+ +K PYE+ + KY EE+E Y++
Sbjct: 119 SVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRK 162
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKY 153
Query: 234 LQVMAKERRESEAMK 248
+ + R++ A K
Sbjct: 154 FEELELYRKQCNARK 168
>gi|405117802|gb|AFR92577.1| hmg1 [Cryptococcus neoformans var. grubii H99]
Length = 907
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 21/147 (14%)
Query: 208 GAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYL 267
G + N+S E KK Y E+ + +E Y AKE +A L E+ + + A
Sbjct: 490 GVAYANLSEERKKYYAERVKEHREIY----AKELAAWQAT-LTPEDIRAENA-------- 536
Query: 268 QFKQEADKENKKPKKE-KDPLKPKHPVTAYFLF------SSERRAALLADNKNVLEVAKI 320
F+ + KE K K KDP PK P++AYFLF +S+ RA + + + +
Sbjct: 537 -FRAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKAIRENSDIRAQVWGTEAETTKQSVM 595
Query: 321 TGEEWKNMTEEQKRPYEEIAKKNKEKY 347
E+W+++T+++KRPY E A+ +K+ Y
Sbjct: 596 AAEKWRSLTDDEKRPYLEQAEHDKQTY 622
>gi|57232750|ref|NP_660206.2| high mobility group protein B4 [Homo sapiens]
gi|387912835|sp|Q8WW32.2|HMGB4_HUMAN RecName: Full=High mobility group protein B4
gi|189065201|dbj|BAG34924.1| unnamed protein product [Homo sapiens]
gi|208968483|dbj|BAG74080.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 36/164 (21%)
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
N FKE + KW+++S EK YE L + K R + E M + +
Sbjct: 33 NTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKLDKARYQEEMMNYVGKRK 83
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN- 313
K++ +DP +P+ P +++ LF + A L +N N
Sbjct: 84 KRRK-------------------------RDPQEPRRPPSSFLLFCQDHYAQLKRENPNW 118
Query: 314 -VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
V++VAK TG+ W T+ +K PYE+ + KY EE+E Y++
Sbjct: 119 SVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRK 162
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKY 153
Query: 234 LQVMAKERRESEAMK 248
+ + R++ A K
Sbjct: 154 FEELELYRKQCNARK 168
>gi|410966739|ref|XP_003989887.1| PREDICTED: high mobility group protein B4 [Felis catus]
Length = 193
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 18 YIHFLLNYRNKFKEQQPNTYLSFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M KK ++++DP P+ P +++
Sbjct: 69 DKARYQEEMMNY-------------------------GGKKKKRRKRDPYAPRRPPSSFL 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N N V++VAK +G+ W T +K+PYE+ A + KY E++E Y+
Sbjct: 104 LFCQDHYAQLKRENPNWSVVQVAKASGKMWSATTGAEKQPYEQRAALLRAKYQEDLEIYR 163
Query: 356 RRMK 359
++ K
Sbjct: 164 KQRK 167
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
+RP ++L+C+D + + K+ENP ++ G W + EK+PYE+ KY
Sbjct: 96 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKASGKMWSATTGAEKQPYEQRAALLRAKY 155
Query: 227 QAEKEAY 233
Q + E Y
Sbjct: 156 QEDLEIY 162
>gi|397501069|ref|XP_003821221.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor A,
mitochondrial [Pan paniscus]
Length = 284
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 101/188 (53%), Gaps = 13/188 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 89 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIKRIAQRWRELPDSKKKIYQDAYRAEWQVY 148
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ +++ + + +++ E E+++++L+ K K+ KPK P
Sbjct: 149 KEEISRFKEQLTPSQIMSLEK------EIMDKHLKRKAMTKKKXLTLLG-----KPKRPR 197
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+AY ++ +ER D+ E K E WKN+++ +K Y + AK+++ +Y+ EM++
Sbjct: 198 SAYNVYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKS 255
Query: 354 YKRRMKEL 361
++ +M E+
Sbjct: 256 WEEQMIEV 263
>gi|189205162|ref|XP_001938916.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923152|ref|XP_003300124.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
gi|187986015|gb|EDU51503.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325919|gb|EFQ91802.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
Length = 106
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK ++AY F++E+R + DN + EV K+ GE+WK + E+Q+ PYE A +
Sbjct: 25 PNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRTPYEAKAAAD 84
Query: 344 KEKYNEEMEAY 354
K++Y EE AY
Sbjct: 85 KKRYEEEKAAY 95
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q + +++NP +F E+ +LG KWK ++ +++ PYE K A+K+ Y
Sbjct: 29 KRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRTPYEAKAAADKKRY 88
>gi|449455609|ref|XP_004145545.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449511984|ref|XP_004164108.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Cucumis sativus]
gi|449511988|ref|XP_004164109.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Cucumis sativus]
Length = 146
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN---VLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R +N N V V K G++WK+M++ +K PY A
Sbjct: 35 DPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSDAEKAPYIAKAD 94
Query: 342 KNKEKYNEEMEAYKRR 357
K K +Y + M+AY ++
Sbjct: 95 KRKVEYEKNMKAYNKK 110
>gi|389593823|ref|XP_003722160.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
gi|321438658|emb|CBZ12417.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
Length = 299
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 42/204 (20%)
Query: 159 KDKEQDRKKKGCAERKRPS-------PPYILWCKDQWNEAKKENPEAEFKEITNILGAKW 211
KDKE R KK K+P PYI++ + + K ++P+ + ++ + +G W
Sbjct: 99 KDKESARGKK----EKKPDDYPKGALSPYIIFVNENREKLKAKHPDMKNTDLLSEMGNLW 154
Query: 212 KNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQ 271
K VS EEK Y++ +K Y + MA A+ FK+
Sbjct: 155 KKVSEEEKSRYQKLADEDKLRYDREMAAYIARGGAV---------------------FKR 193
Query: 272 EADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT--GEEWKNMT 329
K K+ PK +TAYF F+S+ R A + N+ +++ G W M+
Sbjct: 194 GGKKAKKEKDP----KAPKRALTAYFFFASDYR----AKHANIPAKQQMSEAGAAWGKMS 245
Query: 330 EEQKRPYEEIAKKNKEKYNEEMEA 353
E+K+PYEE+A K+K++Y E
Sbjct: 246 AEEKKPYEELAAKDKKRYEAECSG 269
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 270 KQEADKENKKPKKEKDPLK-PKHPVTAYFLFSSERRAALLA---DNKNVLEVAKITGEEW 325
K + DKE+ + KKEK P PK ++ Y +F +E R L A D KN ++++ G W
Sbjct: 96 KSKKDKESARGKKEKKPDDYPKGALSPYIIFVNENREKLKAKHPDMKNTDLLSEM-GNLW 154
Query: 326 KNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKELL 362
K ++EE+K Y+++A ++K +Y+ EM AY R +
Sbjct: 155 KKVSEEEKSRYQKLADEDKLRYDREMAAYIARGGAVF 191
>gi|169610541|ref|XP_001798689.1| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
gi|160702095|gb|EAT84650.2| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
Length = 106
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK ++AY F++E+R + DN + EV K+ GE+WK + E+Q+ PYE A +
Sbjct: 25 PNAPKRGLSAYMFFANEQRDKVREDNPGIKFGEVGKMLGEKWKALNEKQRTPYEAKAAAD 84
Query: 344 KEKYNEEMEAY 354
K++Y EE AY
Sbjct: 85 KKRYEEEKAAY 95
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ +++NP +F E+ +LG KWK ++ +++ PYE K A+K+ Y
Sbjct: 29 KRGLSAYMFFANEQRDKVREDNPGIKFGEVGKMLGEKWKALNEKQRTPYEAKAAADKKRY 88
>gi|351725567|ref|NP_001236841.1| HMG1/2-like protein [Glycine max]
gi|123379|sp|P26585.1|HMGL_SOYBN RecName: Full=HMG1/2-like protein; AltName: Full=Protein SB11
gi|18645|emb|CAA41200.1| HMG-1 like protein gene [Glycine max]
Length = 152
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 273 ADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMT 329
A K K K KDP KPK P +A+F+F E R +NK V V K G +WK M+
Sbjct: 28 ARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMS 87
Query: 330 EEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+ +K PY ++K K +Y + M AY ++ E
Sbjct: 88 DAEKAPYVAKSEKRKVEYEKNMRAYNKKQAE 118
>gi|444730109|gb|ELW70504.1| High mobility group protein B1 [Tupaia chinensis]
Length = 208
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F + KWK +SA+EK +E+ +A+K
Sbjct: 4 YAFFVQTCREEHKKKHPDASVNFSGFSKKRSEKWKTMSAKEKGKFEDMAKADK------- 56
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
A++ RE ++ Y+ K E K K KDP PK P A+F
Sbjct: 57 ARDERE-------------------MKTYIPPKGETKK------KFKDPSAPKRPPLAFF 91
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 92 LFCSEYRPKIKGEQSGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYKKDIAAYR 151
Query: 356 RRMK 359
+ K
Sbjct: 152 AKGK 155
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +FLF SE R + + N + +VAK GE W N+++ +K+PY A K
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 99
Query: 343 NKEKYNEEMEAYKRRMK 359
KEKY +++ YK + K
Sbjct: 100 LKEKYEKDVADYKSKGK 116
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP P + L+ + + K NP ++ LG W N+S EK+PY K KE Y
Sbjct: 45 KRPPPGFFLFFSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKY 104
>gi|224002190|ref|XP_002290767.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
gi|220974189|gb|EED92519.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
Length = 765
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 37/194 (19%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + + + + K NP+A F E+ ++GA++K +SA EK YEE
Sbjct: 542 KRGLSAFNFFTSAKRGDIKAANPDASFAELAKLVGAEFKGLSASEKAKYEE--------- 592
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKK---------EK 284
L K+R E E +E Y+ ++++D E+ K +K
Sbjct: 593 LAANDKKRYEKE-----------------MESYVPPEEDSDDESDGEKTTKKPSAKKAKK 635
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P+ Y LF++ RA + +N + + +V+K G +K + E++K ++ A
Sbjct: 636 DPNAPKRPMNPYMLFANSVRAQVREENPDMSMGDVSKEIGIRYKAIDEKEKAKWQSKADA 695
Query: 343 NKEKYNEEMEAYKR 356
KE Y +EM Y++
Sbjct: 696 AKEVYKKEMAQYEK 709
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++A+ F+S +R + A N + E+AK+ G E+K ++ +K YEE+A
Sbjct: 537 DPNAPKRGLSAFNFFTSAKRGDIKAANPDASFAELAKLVGAEFKGLSASEKAKYEELAAN 596
Query: 343 NKEKYNEEMEAY 354
+K++Y +EME+Y
Sbjct: 597 DKKRYEKEMESY 608
>gi|195479189|ref|XP_002100798.1| GE17263 [Drosophila yakuba]
gi|194188322|gb|EDX01906.1| GE17263 [Drosophila yakuba]
Length = 394
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 36/202 (17%)
Query: 158 LKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVS 215
++ + D K +G R ++ C++ E KK++P+ F E + +WK +
Sbjct: 171 IRGGKADAKPRG---RMTAYAYFVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMV 224
Query: 216 AEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADK 275
+EKK + E AEK+ K+R E+E ++ Y+ K
Sbjct: 225 DKEKKRFHE--MAEKD-------KQRYEAE-----------------MQNYVPPKGAVVG 258
Query: 276 ENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQK 333
KK K+ KDP PK ++A+F F ++ R + A N V ++AK G +W ++ E K
Sbjct: 259 RGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVK 318
Query: 334 RPYEEIAKKNKEKYNEEMEAYK 355
+ YE +A+++K +Y EM YK
Sbjct: 319 QKYESMAERDKARYEREMTEYK 340
>gi|348534365|ref|XP_003454672.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like, partial
[Oreochromis niloticus]
Length = 424
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 21/158 (13%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y Y+AEK Y + M
Sbjct: 69 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYEAEKIEYNESMK 128
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKEKDPL 287
A +S A LEEE +Q+ + ++ E Y+ + D P D
Sbjct: 129 AYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKDEPYMSIQPAED-----PDDYDDGF 183
Query: 288 KPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH A F L S +++ D ++V+ A++
Sbjct: 184 SIKHLAAARFQRNHRLISEILSESVVPDVRSVVTTARM 221
>gi|194770156|ref|XP_001967163.1| GF19115 [Drosophila ananassae]
gi|190619283|gb|EDV34807.1| GF19115 [Drosophila ananassae]
Length = 387
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 183 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 231
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 232 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 273
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 274 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 333
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 266 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 325
>gi|587104|emb|CAA57212.1| unnamed protein product [Drosophila melanogaster]
Length = 328
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 124 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 172
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 173 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 214
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 215 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 274
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 207 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 266
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P++AY F+S++R + + ++ EV K TG WK +++++K PY++ A K
Sbjct: 27 DPNAPKRPLSAYMYFASDKRVEMKKSDPSLSLGEVGKATGAAWKELSDKEKEPYQKKADK 86
Query: 343 NKEKYNEEMEAYKRR 357
+K +Y +E AY+++
Sbjct: 87 DKARYEKEKAAYEKK 101
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK-------Y 226
KRP Y+ + D+ E KK +P E+ GA WK +S +EK+PY++K Y
Sbjct: 32 KRPLSAYMYFASDKRVEMKKSDPSLSLGEVGKATGAAWKELSDKEKEPYQKKADKDKARY 91
Query: 227 QAEKEAY 233
+ EK AY
Sbjct: 92 EKEKAAY 98
>gi|194893856|ref|XP_001977954.1| GG17955 [Drosophila erecta]
gi|195567092|ref|XP_002107106.1| GD17278 [Drosophila simulans]
gi|190649603|gb|EDV46881.1| GG17955 [Drosophila erecta]
gi|194204505|gb|EDX18081.1| GD17278 [Drosophila simulans]
Length = 393
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 189 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 237
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 238 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 279
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 280 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 339
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 272 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 331
>gi|67475910|ref|XP_653586.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470556|gb|EAL48200.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703217|gb|EMD43706.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica KU27]
Length = 111
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P +PK P T YFL+ +E RA++ ++ + V E+AKI E+WK + EE+K+ Y+ A
Sbjct: 23 PNRPKRPPTPYFLYLNEHRASIKEEHPDAKVTEIAKIASEQWKALGEEEKKEYQTKADAA 82
Query: 344 KEKYNEEMEAY 354
KE+Y +++E Y
Sbjct: 83 KEQYKKDIEKY 93
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP PY L+ + K+E+P+A+ EI I +WK + EEKK Y+ K A KE Y
Sbjct: 27 KRPPTPYFLYLNEHRASIKEEHPDAKVTEIAKIASEQWKALGEEEKKEYQTKADAAKEQY 86
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRP 335
K+ KEKDP PK ++ + FS R L N + +V ++ GE+WK ++ E+K P
Sbjct: 519 KESNKEKDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVGRVLGEKWKKLSAEEKEP 578
Query: 336 YEEIAKKNKEKYNEEMEAYK 355
YE A+++K++Y +E+ YK
Sbjct: 579 YEAKAREDKKRYMDEISGYK 598
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR ++ + K + KK NP F ++ +LG KWK +SAEEK+PYE K + +K+ Y
Sbjct: 531 KRAMSGFMFFSKLERENLKKTNPGISFTDVGRVLGEKWKKLSAEEKEPYEAKAREDKKRY 590
Query: 234 L 234
+
Sbjct: 591 M 591
>gi|45551469|ref|NP_727959.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|45447020|gb|AAN09394.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|327180774|gb|AEA30996.1| RE44118p [Drosophila melanogaster]
Length = 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 182 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 230
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 231 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 272
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 273 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 332
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 265 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 324
>gi|24642472|ref|NP_727960.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|24642474|ref|NP_727961.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|24642476|ref|NP_542446.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|16768340|gb|AAL28389.1| GM02110p [Drosophila melanogaster]
gi|22832356|gb|AAN09395.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|22832357|gb|AAN09396.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|22832358|gb|AAF48594.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|220943192|gb|ACL84139.1| Dsp1-PA [synthetic construct]
gi|220953466|gb|ACL89276.1| Dsp1-PA [synthetic construct]
Length = 385
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 181 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 229
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 230 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 271
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 272 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 331
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 264 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 323
>gi|291231769|ref|XP_002735836.1| PREDICTED: high mobility group 20 B-like [Saccoglossus kowalevskii]
Length = 546
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K P+ Y+L+ +Q + K+ENPE F E+T +LG++W ++SAE+K+ Y E+ + +K+ Y
Sbjct: 261 KAPTTAYVLYLNEQRVKVKEENPEMAFTEVTKLLGSQWSSMSAEDKQKYVEEAENDKKRY 320
Query: 234 L 234
+
Sbjct: 321 I 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
D PK P TAY L+ +E+R + +N EV K+ G +W +M+ E K+ Y E A+
Sbjct: 256 DTGSPKAPTTAYVLYLNEQRVKVKEENPEMAFTEVTKLLGSQWSSMSAEDKQKYVEEAEN 315
Query: 343 NKEKYNEEMEAYKR 356
+K++Y +E++AY++
Sbjct: 316 DKKRYIDELKAYQQ 329
>gi|45555716|ref|NP_996485.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
gi|17366497|sp|Q24537.1|HMG2_DROME RecName: Full=High mobility group protein DSP1; AltName:
Full=Protein dorsal switch 1
gi|1150375|emb|CAA61938.1| ssrp2 [Drosophila melanogaster]
gi|45447019|gb|AAS65386.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
Length = 393
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 189 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 237
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 238 -KQRYEAE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 279
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 280 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 339
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 272 KRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 331
>gi|58258723|ref|XP_566774.1| HMG1 [Cryptococcus neoformans var. neoformans JEC21]
gi|134106799|ref|XP_777941.1| hypothetical protein CNBA4100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260641|gb|EAL23294.1| hypothetical protein CNBA4100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222911|gb|AAW40955.1| HMG1, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 895
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 21/147 (14%)
Query: 208 GAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYL 267
G + N+S E KK Y E+ + +E Y AKE +A L E+ + + A
Sbjct: 478 GVAYANLSEERKKYYAERVKEHREIY----AKELAAWQAT-LTPEDIRAENA-------- 524
Query: 268 QFKQEADKENKKPKKE-KDPLKPKHPVTAYFLF------SSERRAALLADNKNVLEVAKI 320
F+ + KE K K KDP PK P++AYFLF +S+ RA + + + +
Sbjct: 525 -FRAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKAIRENSDIRAQVWGTEAETTKQSVM 583
Query: 321 TGEEWKNMTEEQKRPYEEIAKKNKEKY 347
E+W+++T+++KRPY E A+ +K+ Y
Sbjct: 584 AAEKWRSLTDDEKRPYLEQAEHDKQTY 610
>gi|296202119|ref|XP_002748265.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390463329|ref|XP_003733013.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYKKEM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K +DP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFEDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+ YE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEIWNNTAADDKQHYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|291224884|ref|XP_002732433.1| PREDICTED: general transcription factor IIH, polypeptide 2, 44kD
subunit-like [Saccoglossus kowalevskii]
Length = 593
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP+ P++++ + +N + PE + +I +W N+S E+K Y + Y KE +
Sbjct: 405 KRPTTPFVVFAEKMFNSS----PERNYSKILKDASKEWANMSDEDKTQYYDTY---KERF 457
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
AK + E + + EEE + Q K++A ++ + K+ L KPK P
Sbjct: 458 ----AKYKEEMKTYQPTEEETEA-----------QRKKKAREQRRLTLKKLAKLGKPKLP 502
Query: 293 VTAYFLFSSERRAALLADNKNVL-EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
++Y ++ E+ + AD+K EV +WK +TEE+K+PY++I + K++Y EM
Sbjct: 503 GSSYSMYVREKMKS--ADSKGRQKEVMIEASTDWKFLTEEEKQPYKDIFLQEKKRYMNEM 560
Query: 352 EAYKRRMKEL 361
E ++++M +L
Sbjct: 561 EVWEKKMIKL 570
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +A+FLF SE R + D + + AK GE W T + K+P+E+ A K
Sbjct: 92 DPNAPKRPPSAFFLFCSENRPQIKNDTPGLSIGDTAKKLGELWSEQTPKDKQPFEQKAAK 151
Query: 343 NKEKYNEEMEAYK 355
KEKY +++ AY+
Sbjct: 152 LKEKYEKDVAAYR 164
>gi|414590134|tpg|DAA40705.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 120
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKR 334
+K K EKDP KPK P TA+F+F E R + NV +V+ I G+ WK++++ +K
Sbjct: 17 RKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKA 76
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
PY A+K K +Y ++M+AY
Sbjct: 77 PYVSKAEKLKVEYTKKMDAY 96
>gi|281350894|gb|EFB26478.1| hypothetical protein PANDA_002732 [Ailuropoda melanoleuca]
Length = 157
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 36/161 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K KDP PK P +A+F
Sbjct: 76 --------------------------KTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
LF SE R + ++ + +VAK GE W N + K+PY
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
>gi|414590133|tpg|DAA40704.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 140
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKR 334
+K K EKDP KPK P TA+F+F E R + NV +V+ I G+ WK++++ +K
Sbjct: 37 RKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKA 96
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
PY A+K K +Y ++M+AY
Sbjct: 97 PYVSKAEKLKVEYTKKMDAY 116
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 36/172 (20%)
Query: 192 KKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKL 249
KK +P+A F E + +WK +SA++K +E+ +A+K Y ER MK+
Sbjct: 28 KKRHPDASVNFSEFSKKCSERWKTMSAKKKGKFEDMAKADKARY------ERE----MKI 77
Query: 250 LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
Y+ K E KK KDP PK P +A+FLF SE +
Sbjct: 78 ----------------YIPPKGETK------KKFKDPNAPKRPPSAFFLFCSEYCPKIKG 115
Query: 310 DNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
++ + +VAK GE W N K+P E A K K KY + + AY+ + K
Sbjct: 116 EHPGLSIGDVAKKLGEMWNNTAAGDKQPCERKAAKLKVKYEKGIAAYQAKGK 167
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLF---SSERRAALLAD-NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E+ D + N E +K E WK M+ ++K +E++A
Sbjct: 5 DPKKPRGKMSSYTFFVQTCPEKHKKRHPDASVNFSEFSKKCSERWKTMSAKKKGKFEDMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y EM+ Y
Sbjct: 65 KADKARYEREMKIY 78
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 30/159 (18%)
Query: 200 FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTA 259
F E + +WK ++ EKK +++ + +K Y + MAK
Sbjct: 38 FTEFSKKCAERWKTMNDGEKKRFQDLAETDKRRYEREMAK-------------------- 77
Query: 260 MELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEV 317
Y+ K + ++ +K+KDP PK ++A+F++ ++ R + A + + V E+
Sbjct: 78 ------YVPPK--GAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGEI 129
Query: 318 AKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
AKI G +WK +++ K YE+ A+ K +Y +E+ YKR
Sbjct: 130 AKILGRQWKEISDSDKAKYEKKAQTEKARYQKELAEYKR 168
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KR + ++C D + + +P+ + EI ILG +WK +S +K YE+
Sbjct: 91 RKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGEIAKILGRQWKEISDSDKAKYEK 150
Query: 225 KYQAEKEAYLQVMAKERRESEA 246
K Q EK Y + +A+ +R
Sbjct: 151 KAQTEKARYQKELAEYKRTGGG 172
>gi|18088957|gb|AAH21180.1| High-mobility group box 4 [Homo sapiens]
gi|312150396|gb|ADQ31710.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 38/181 (20%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y+ + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 16 YVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 66
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + K++ +DP P+ P +++
Sbjct: 67 DKARYQEEMMNYVGKRKKRRK-------------------------RDPQAPRRPPSSFL 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N N V++VAK TG+ W T+ +K PYE+ + KY EE+E Y+
Sbjct: 102 LFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYR 161
Query: 356 R 356
+
Sbjct: 162 K 162
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K+ENP ++ G W + EK PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKY 153
Query: 234 LQVMAKERRESEAMK 248
+ + R++ A K
Sbjct: 154 FEELELYRKQCNARK 168
>gi|432960800|ref|XP_004086471.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily E member 1-like
[Oryzias latipes]
Length = 479
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK
Sbjct: 103 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNEYEAEKIEYNDSLK 162
Query: 231 -----EAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKD 285
AYL + + R AM+ EE ++++ ++ E Y+ + D P D
Sbjct: 163 AYHNSPAYLAYVNAKNRAEAAME--EESRQRQSRLDKGEPYMSIQPAED-----PDDYDD 215
Query: 286 PLKPKHPVTAYF-----LFSSERRAALLADNKNVLEVAKI 320
KH A F L S ++ D ++V+ A++
Sbjct: 216 GFSVKHTAAARFQRNHRLISDILSEIVVPDVRSVVTTARM 255
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +A+F+F S+ R + DN + ++AK GE W + + K PYE A K
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWATQSAKDKAPYEAKAAK 173
Query: 343 NKEKYNEEMEAYK 355
KEKY +++ AY+
Sbjct: 174 LKEKYEKDVAAYR 186
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KP+ +AY F + E + + N E +K E WK M+ ++K ++E+
Sbjct: 26 KDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDEL 85
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM+ Y
Sbjct: 86 AKTDKARYDREMKTY 100
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D + K++NP +I LG W SA++K PYE K KE Y
Sbjct: 119 KRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWATQSAKDKAPYEAKAAKLKEKY 178
Query: 234 LQVMAKERRESEAMK 248
+ +A R + + K
Sbjct: 179 EKDVAAYRAKGGSGK 193
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 189 NEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMK 248
+E K N + F E + ++WK ++ +EKK ++ +A+K Y Q MAK
Sbjct: 26 HEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQVLAEADKRRYEQNMAK--------- 76
Query: 249 LLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALL 308
Y+ K + ++ +K+KDP PK ++A+F++ ++ R +
Sbjct: 77 -----------------YVPPK--GAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVR 117
Query: 309 ADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
A + + V ++AKI G++WK +++ K YE+ A+ + +Y +E+
Sbjct: 118 AAHPDFQVGDIAKILGKQWKEISDSDKAKYEKKAQTERARYQKEL 162
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 165 RKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
RKKK KR + ++C D + + +P+ + +I ILG +WK +S +K YE+
Sbjct: 90 RKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGDIAKILGKQWKEISDSDKAKYEK 149
Query: 225 KYQAEKEAYLQVMA 238
K Q E+ Y + +A
Sbjct: 150 KAQTERARYQKELA 163
>gi|430812930|emb|CCJ29675.1| unnamed protein product [Pneumocystis jirovecii]
Length = 281
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 272 EADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNM 328
+AD K +K +DP +PK P++AY F + R A+ L ++ E+ E W +
Sbjct: 91 QADVTEVKKRKARDPNQPKRPLSAYLSFQLKTRQAVKDSLGESATQKEILSEIAERWSKL 150
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+++++P+EE A+K +E+Y++EM AY+
Sbjct: 151 NDDERKPFEEEARKAREQYDKEMTAYR 177
>gi|453089146|gb|EMF17186.1| hypothetical protein SEPMUDRAFT_146289 [Mycosphaerella populorum
SO2202]
Length = 411
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 210 KWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQF 269
KWK +SA + + Y +LQ +E E+E + +E ++ + L + Q
Sbjct: 261 KWKELSAADLEHYN---------HLQRTQREASEAEYQRWIESYTPEQIRLANLAR-AQL 310
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMT 329
++E +N K + +D +PK P +AY +FS R+A+ + V + +K+ +EWK ++
Sbjct: 311 RREFPSQNSKWAELQDQRRPKRPESAYLIFSRNRQASGDFTHIKVPDRSKLLSQEWKALS 370
Query: 330 EEQKRPYEEIAKKNKEKYNEE-MEAYKR 356
E ++ YE++ +N E++ EE AY R
Sbjct: 371 ESERSKYEKLYNQNHERWTEEYTRAYGR 398
>gi|238013344|gb|ACR37707.1| unknown [Zea mays]
gi|414590135|tpg|DAA40706.1| TPA: HMG1/2-like protein [Zea mays]
Length = 127
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKR 334
+K K EKDP KPK P TA+F+F E R + NV +V+ I G+ WK++++ +K
Sbjct: 17 RKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKA 76
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
PY A+K K +Y ++M+AY
Sbjct: 77 PYVSKAEKLKVEYTKKMDAY 96
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK+NPE F E + +WK +S +EK ++E +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ +KDP K P + +F
Sbjct: 72 -------------DREMKDYGPAKGGKK-----------------KKDPNASKRPPSGFF 101
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + + N + +VAK GE W N+ + +K+PY A K KEKY +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 356 RRMK 359
+ K
Sbjct: 162 SKGK 165
>gi|395857899|ref|XP_003801318.1| PREDICTED: high mobility group protein B4 [Otolemur garnettii]
Length = 187
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP P+ P +++ LF + A L +N N V++VAK +G+ W T +K+PYEE A
Sbjct: 89 DPQAPRRPPSSFLLFCKDHYAQLKRENPNWSVVQVAKASGKMWSLSTNAEKQPYEERAAL 148
Query: 343 NKEKYNEEMEAYKR 356
+ KY EE++ Y+R
Sbjct: 149 LRAKYQEELQIYRR 162
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+CKD + + K+ENP ++ G W + EK+PYEE+ + Y
Sbjct: 94 RRPPSSFLLFCKDHYAQLKRENPNWSVVQVAKASGKMWSLSTNAEKQPYEERAALLRAKY 153
Query: 234 LQVMAKERRESEAMK 248
+ + RR+ A K
Sbjct: 154 QEELQIYRRQCNARK 168
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
KRP Y+ + +DQ K NPEA F E+ +LGAKWK +S EKKPY +
Sbjct: 55 KRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKEMSEAEKKPYND 105
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKN 327
K + + K +KDP PK P++AY FS ++R + N EV ++ G +WK
Sbjct: 35 KSSTSTQKRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKE 94
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
M+E +K+PY ++A ++K + E AY +R
Sbjct: 95 MSEAEKKPYNDMANRDKARAEAEKAAYNKR 124
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR ++ + + + KK NP F ++ +LG KWKN+SAEEK+PYE K QA+K+ Y
Sbjct: 559 KRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADKKRY 618
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++ + FS R L N + +V ++ GE+WKN++ E+K PYE A+
Sbjct: 554 DPNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQA 613
Query: 343 NKEKYNEEMEAYK 355
+K++Y +E+ YK
Sbjct: 614 DKKRYKDEISGYK 626
>gi|169869341|ref|XP_001841237.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
gi|116497705|gb|EAU80600.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
Length = 255
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P ++Y LF +E R L N N+ E+ + E+WKNMT+EQK Y + K
Sbjct: 73 DPNAPKRPASSYILFQNEVRNELKRQNPNLTNPELLTLISEKWKNMTDEQKETYNQQMLK 132
Query: 343 NKEKYNEEMEAYKRR 357
KE+Y++ AY R
Sbjct: 133 AKEEYSQAKNAYDNR 147
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP+ YIL+ + NE K++NP E+ ++ KWKN++ E+K+ Y ++ KE Y
Sbjct: 78 KRPASSYILFQNEVRNELKRQNPNLTNPELLTLISEKWKNMTDEQKETYNQQMLKAKEEY 137
Query: 234 LQV 236
Q
Sbjct: 138 SQA 140
>gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGE 323
L K++A K K KDP KPK P +A+F+F + R +NK+V V K G+
Sbjct: 14 LAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGD 73
Query: 324 EWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
+WK +T +K P+ A+K K++Y + ++AY ++
Sbjct: 74 KWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKK 107
>gi|340370076|ref|XP_003383572.1| PREDICTED: high mobility group protein 1.2-like [Amphimedon
queenslandica]
Length = 211
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK ++A+ FS+ +R + + N ++ E+AK G W MT EQK+PYEE AK++K +
Sbjct: 99 PKRNLSAFMFFSNAKRPKIKSQNPEASIGEIAKQLGAAWNVMTPEQKKPYEEQAKEDKLR 158
Query: 347 YNEEMEAYK 355
Y EEME K
Sbjct: 159 YQEEMERIK 167
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
K +KDP KPK +AY F + + + E +K E+WK M ++ K+ + +++
Sbjct: 4 KSDKDPNKPKGRTSAYAFFVQDMKETPEGKSLKFTEFSKYCSEQWKKMDDDDKQRFIDLS 63
Query: 341 KKNKEKYNEEMEAYKR 356
++++ +Y +EM Y++
Sbjct: 64 QEDRTRYKKEMAVYQK 79
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 192 KKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
K +NPEA EI LGA W ++ E+KKPYEE+ + +K Y + M
Sbjct: 118 KSQNPEASIGEIAKQLGAAWNVMTPEQKKPYEEQAKEDKLRYQEEM 163
>gi|444707322|gb|ELW48604.1| High mobility group protein B4 [Tupaia chinensis]
Length = 189
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 38/181 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KWK++S EK YE L +
Sbjct: 18 YIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWKSISKHEKAKYEA---------LAKL 68
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + K++ +DP P+ P +++
Sbjct: 69 DKARYQEEMMNYVGRRRKRRK-------------------------RDPQAPRRPPSSFI 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L +N + V++VAK +G+ W MT +K+PYE+ A + +Y EE+E Y+
Sbjct: 104 LFCQDHYAQLKRENPSWTVVQVAKASGKMWTVMTAVEKQPYEQRAALLRARYQEELEVYR 163
Query: 356 R 356
+
Sbjct: 164 K 164
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
+RP +IL+C+D + + K+ENP ++ G W ++A EK+PYE+ +Y
Sbjct: 96 RRPPSSFILFCQDHYAQLKRENPSWTVVQVAKASGKMWTVMTAVEKQPYEQRAALLRARY 155
Query: 227 QAEKEAY 233
Q E E Y
Sbjct: 156 QEELEVY 162
>gi|304651500|gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F E R + NK+V V K G++WK+++E +K PY
Sbjct: 31 KAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEKAPYV 90
Query: 338 EIAKKNKEKYNEEMEAYKRRMKE 360
A+K K +Y ++++AY + E
Sbjct: 91 AKAEKRKVEYEKKLKAYNKGQAE 113
>gi|449502651|ref|XP_004161704.1| PREDICTED: uncharacterized LOC101211904 [Cucumis sativus]
Length = 191
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 84/152 (55%), Gaps = 18/152 (11%)
Query: 19 SRRALKPKNSLANEAVVMAQTPSQSP----IPNPPDAGLSKENHESLSQPKKAAAKGKAK 74
RR L+PKNSL N +A+ P I DA +KENH P
Sbjct: 19 GRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDA--NKENH-----PPPTTV----- 66
Query: 75 QATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLH 134
+ + D S +L ++ +E+++L+ E+TE++L+E+D +L+++ +EL + +EQ L
Sbjct: 67 -SIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQEQRDLE 125
Query: 135 MELKKLQKMKEFKP-NMTLPIVQCLKDKEQDR 165
ME+ +L ++KE + M + ++ L++KE+++
Sbjct: 126 MEVDRLFRLKELRSYCMRISPIRSLREKEREK 157
>gi|392352276|ref|XP_003751165.1| PREDICTED: high mobility group protein B1 [Rattus norvegicus]
Length = 187
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 36/161 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
LF SE R + ++ + +VAK GE W N + K+PY
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKERRESEAMKLL 250
+V RR + ++ L
Sbjct: 156 EKV----RRMAGNLRYL 168
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E WK M+ ++K +E++A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y EM+ Y
Sbjct: 65 KADKARYEREMKTY 78
>gi|195134440|ref|XP_002011645.1| GI10980 [Drosophila mojavensis]
gi|193906768|gb|EDW05635.1| GI10980 [Drosophila mojavensis]
Length = 402
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 193 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 241
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 242 -KQRYEQE-----------------MQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFF 283
Query: 298 LFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 284 WFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 343
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR + +C D+ N+ K NPE +I LG KW +V E K+ YE + +K Y
Sbjct: 276 KRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 335
>gi|170580208|ref|XP_001895163.1| structure-specific recognition protein 1 [Brugia malayi]
gi|158597991|gb|EDP35988.1| structure-specific recognition protein 1, putative [Brugia malayi]
Length = 689
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP PK P +AYF++ E A+ + +V E A+ G+ WK + EE K+ YEE AK++K
Sbjct: 550 DPNAPKKPQSAYFIWFGENYASFKKEGVSVTEAAQRAGKMWKEIDEETKKKYEERAKEDK 609
Query: 345 EKYNEEMEAY 354
E+Y EM+ Y
Sbjct: 610 ERYAREMKEY 619
>gi|398406589|ref|XP_003854760.1| HMGB family protein [Zymoseptoria tritici IPO323]
gi|339474644|gb|EGP89736.1| HMGB family protein [Zymoseptoria tritici IPO323]
Length = 111
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK ++AY F++E+R + +N + EV K+ GE WK + E+QK PYE A +
Sbjct: 26 PNMPKRGLSAYMFFANEQRDNVREENPGIKFGEVGKLLGERWKGLNEKQKTPYEAKAAAD 85
Query: 344 KEKYNEEMEAY 354
K++Y EE +AY
Sbjct: 86 KKRYEEEKKAY 96
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK-------Y 226
KR Y+ + +Q + ++ENP +F E+ +LG +WK ++ ++K PYE K Y
Sbjct: 30 KRGLSAYMFFANEQRDNVREENPGIKFGEVGKLLGERWKGLNEKQKTPYEAKAAADKKRY 89
Query: 227 QAEKEAYL 234
+ EK+AYL
Sbjct: 90 EEEKKAYL 97
>gi|392881260|gb|AFM89462.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +V K GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVTKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++T +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVTKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|449449855|ref|XP_004142680.1| PREDICTED: uncharacterized protein LOC101211904 [Cucumis sativus]
Length = 191
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 84/152 (55%), Gaps = 18/152 (11%)
Query: 19 SRRALKPKNSLANEAVVMAQTPSQSP----IPNPPDAGLSKENHESLSQPKKAAAKGKAK 74
RR L+PKNSL N +A+ P I DA +KENH P
Sbjct: 19 GRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDA--NKENH-----PPPTTV----- 66
Query: 75 QATKKQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLH 134
+ + D S +L ++ +E+++L+ E+TE++L+E+D +L+++ +EL + +EQ L
Sbjct: 67 -SIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQEQRDLE 125
Query: 135 MELKKLQKMKEFKP-NMTLPIVQCLKDKEQDR 165
ME+ +L ++KE + M + ++ L++KE+++
Sbjct: 126 MEVDRLFRLKELRSYCMRISPIRSLREKEREK 157
>gi|225448400|ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
vinifera]
Length = 156
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R ++ NV V K GE+WK+++E K PYE A
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAA 111
Query: 342 KNKEKYNEEMEAYKRRMKEL 361
K K Y + M AY ++ + +
Sbjct: 112 KRKSDYEKLMAAYNKKQESM 131
>gi|195040353|ref|XP_001991052.1| GH12282 [Drosophila grimshawi]
gi|193900810|gb|EDV99676.1| GH12282 [Drosophila grimshawi]
Length = 402
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 39/211 (18%)
Query: 149 NMTLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPE--AEFKEITNI 206
N P+V+ K D K +G R ++ C++ E KK++P+ F E +
Sbjct: 170 NSASPMVRGGK---ADAKPRG---RMTAYAYFVQTCRE---EHKKKHPDETVIFAEFSRK 220
Query: 207 LGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQY 266
+WK + +EKK + E AEK+ K+R E E ++ Y
Sbjct: 221 CAERWKTMVDKEKKRFHE--MAEKD-------KQRYEQE-----------------MQNY 254
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEE 324
+ K KK K+ KDP PK ++A+F F ++ R + A N V ++AK G +
Sbjct: 255 VPPKGTVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRK 314
Query: 325 WKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 315 WSDVDPEVKQKYESMAERDKARYEREMTEYK 345
>gi|356536465|ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 200
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP PK P TA+F F + R + D+K+V V K GE+W++MT+E+K+PY +
Sbjct: 99 DPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 342 KNKEKYNEEMEAY 354
+ K +Y + ME+Y
Sbjct: 159 ELKAEYEKAMESY 171
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +A+F+F S+ R + DN + ++AK GE W + + K PYE A +
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGEMWATQSAKDKAPYEAKAAR 150
Query: 343 NKEKYNEEMEAYK 355
KEKY +++ AY+
Sbjct: 151 LKEKYEKDVAAYR 163
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KP+ ++Y F + E + + N E +K E WK M+ ++K +EE+
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEM 62
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM+ Y
Sbjct: 63 AKNDKVRYDREMKTY 77
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D + K++NP +I LG W SA++K PYE K KE Y
Sbjct: 96 KRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGEMWATQSAKDKAPYEAKAARLKEKY 155
Query: 234 LQVMAKERRESEAMK 248
+ +A R + + K
Sbjct: 156 EKDVAAYRAKGGSGK 170
>gi|388582419|gb|EIM22724.1| hypothetical protein WALSEDRAFT_53977 [Wallemia sebi CBS 633.66]
Length = 137
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAE 229
KR Y+ ++ E KKENP F E+ +LGAKWK +SAEEKKPYEE+ A+
Sbjct: 26 KRALSAYMYMSQEHRAEVKKENPNISFGEVGKVLGAKWKEMSAEEKKPYEEQAAAD 81
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPY 336
KPKK+++ PK ++AY S E RA + +N N+ EV K+ G +WK M+ E+K+PY
Sbjct: 17 KPKKDEN--APKRALSAYMYMSQEHRAEVKKENPNISFGEVGKVLGAKWKEMSAEEKKPY 74
Query: 337 EEIA 340
EE A
Sbjct: 75 EEQA 78
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P+ AY F + R + A+N V ++ K GE WK ++EE K+ Y +
Sbjct: 16 KKVKDPNAPKKPLGAYMWFCKDMRERVKAENPGMSVTDIGKRLGELWKEVSEEDKKKYLK 75
Query: 339 IAKKNKEKYNEEMEAYKR 356
A+ +KE+YN+E AY +
Sbjct: 76 QAEDDKERYNKEAAAYNK 93
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ +CKD K ENP +I LG WK VS E+KK Y ++ + +KE Y
Sbjct: 25 KKPLGAYMWFCKDMRERVKAENPGMSVTDIGKRLGELWKEVSEEDKKKYLKQAEDDKERY 84
>gi|45187563|ref|NP_983786.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|74694642|sp|Q75B82.1|NHP6_ASHGO RecName: Full=Non-histone chromosomal protein 6
gi|44982301|gb|AAS51610.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|374106998|gb|AEY95906.1| FADL310Wp [Ashbya gossypii FDAG1]
Length = 94
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N + +V ++ GE+WK +++++K+PYE A+
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP F ++ +LG KWK +S +EK+PYE K +A+K+ Y
Sbjct: 22 KRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEADKKRY 81
>gi|444526057|gb|ELV14266.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 34/170 (20%)
Query: 192 KKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLE 251
K + F E + +WK +SA+EK +E+K +A++ A+ RE
Sbjct: 18 KHSDASVNFSEFSKKCPERWKTMSAKEKGKFEDKAKADE-------ARCGRE-------- 62
Query: 252 EEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN 311
++ Y+ K E K K KDP PK P +A+FLF SE + ++
Sbjct: 63 -----------MKTYIPPKGETKK------KFKDPNTPKRPPSAFFLFCSEYSPKIKGEH 105
Query: 312 KN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+ +V K GE W N ++K+PYE+ A K KEKY +++ AY+ R K
Sbjct: 106 PGLPIGDVTKKLGEMWNNTGADEKQPYEKKAAKLKEKYEKDIAAYRARGK 155
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++T LG W N A+EK+PYE+K KE Y
Sbjct: 84 KRPPSAFFLFCSEYSPKIKGEHPGLPIGDVTKKLGEMWNNTGADEKQPYEKKAAKLKEKY 143
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 144 EKDIAAYR 151
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +A+FLF SE R + +++ + ++AK GE W + + K+PYE+ A K KEK
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGLPIGDIAKKLGEMWSEQSAKDKQPYEQKAAKLKEK 154
Query: 347 YNEEMEAYKRRMK 359
Y +++ AY+ + K
Sbjct: 155 YGKDIAAYRTKGK 167
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P +I LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLPIGDIAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 GKDIAAYR 163
>gi|363755760|ref|XP_003648095.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892131|gb|AET41278.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 94
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N + +V ++ GE+WK +++++K+PYE A+
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP F ++ +LG KWK +S +EK+PYE K +A+K+ Y
Sbjct: 22 KRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEADKKRY 81
>gi|225448398|ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
vinifera]
gi|147854340|emb|CAN83423.1| hypothetical protein VITISV_023376 [Vitis vinifera]
Length = 166
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R ++ NV V K GE+WK+++E K PYE A
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAA 111
Query: 342 KNKEKYNEEMEAYKRRMKEL 361
K K Y + M AY ++ + +
Sbjct: 112 KRKSDYEKLMAAYNKKQESM 131
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++ +FLF + +RA + + N V +VAK GE+WKN++ K YE+ A K
Sbjct: 121 DPDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAK 180
Query: 343 NKEKYNEEMEAY 354
K +Y ++MEAY
Sbjct: 181 EKIRYEKDMEAY 192
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
KR P+ L+C + E KK +P ++ LG +WKNVSA +K YE+ +Y
Sbjct: 126 KRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAKEKIRY 185
Query: 227 QAEKEAY 233
+ + EAY
Sbjct: 186 EKDMEAY 192
>gi|444517137|gb|ELV11379.1| High mobility group protein B1 [Tupaia chinensis]
Length = 204
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E KWK +SA+EK +E++ +A+K +Y + M
Sbjct: 16 YAFFVQTFQEEHKKQHPDASVSFSEFPKKCSEKWKAMSAKEKGKFEDRAKADKASYERDM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + + + KK KDP PK P +A+F
Sbjct: 76 --------------------------------KTDIPPKKETKKKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYCPKIKGEHPGLSIGDVAKRLGELWNNTAADGKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A+ K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKRLGELWNNTAADGKQPYEKKAAKLKEKY 155
Query: 234 LQVMAKERRES 244
+ +A R E+
Sbjct: 156 EKDIAAYRAEA 166
>gi|156382433|ref|XP_001632558.1| predicted protein [Nematostella vectensis]
gi|156219615|gb|EDO40495.1| predicted protein [Nematostella vectensis]
Length = 287
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 275 KENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVL------EVAKITGEEWKNM 328
+ + K KEKDP PK P A+F+F ++R + D+K+ E+ K +EW N+
Sbjct: 100 RSSAKQDKEKDPNAPKKPANAFFMFCQQQRTVMQEDHKDATAVMGHHELTKSLAKEWNNL 159
Query: 329 TEEQKRPYEEIAKKNKEKYNEEMEAY 354
++K+ Y E+ +++KE+Y EM+ Y
Sbjct: 160 LPDEKKVYYEMYERDKERYELEMKQY 185
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE 224
KRP Y+ + +DQ K NPEA F E+ +LGAKWK +S EKKPY +
Sbjct: 29 KRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKEMSEAEKKPYND 79
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEE 338
K +KDP PK P++AY FS ++R + N EV ++ G +WK M+E +K+PY +
Sbjct: 20 KAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKEMSEAEKKPYND 79
Query: 339 IAKKNKEKYNEEMEAYKRR 357
+A ++K + E AY +R
Sbjct: 80 MANRDKARAEAEKAAYNKR 98
>gi|82753906|ref|XP_727864.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23483924|gb|EAA19429.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 126
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DPL PK ++AY + ++R ++ + K V +V K+ GE W +T QK PYE+ A
Sbjct: 48 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 107
Query: 341 KKNKEKYNEEMEAYKR 356
+ +K +Y++E+E Y++
Sbjct: 108 ELDKVRYSKEIEEYRK 123
>gi|148277100|ref|NP_081312.2| high mobility group protein B4 [Mus musculus]
gi|81892334|sp|Q6P8W9.1|HMGB4_MOUSE RecName: Full=High mobility group protein B4
gi|38174595|gb|AAH61030.1| High-mobility group box 4 [Mus musculus]
gi|148698295|gb|EDL30242.1| high-mobility group box 4 [Mus musculus]
Length = 181
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 38/180 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 16 YIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA---------LAEL 66
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M + + K++ +DP P+ P +++
Sbjct: 67 DKARYQQEMMNYIGKRRKRRK-------------------------RDPKAPRKPPSSFL 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LFS + A L +N + V++VAK G+ W E +K+PYE+ A + KY EE EAY+
Sbjct: 102 LFSRDHYAMLKQENPDWTVVQVAKAAGKMWSTTDEAEKKPYEQKAALMRAKYFEEQEAYR 161
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
++P ++L+ +D + K+ENP+ ++ G W EKKPYE+ KY
Sbjct: 94 RKPPSSFLLFSRDHYAMLKQENPDWTVVQVAKAAGKMWSTTDEAEKKPYEQKAALMRAKY 153
Query: 227 QAEKEAY 233
E+EAY
Sbjct: 154 FEEQEAY 160
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 283 EKDPLKPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEE 338
EKD L+PK V++Y F R N E ++ E+W+++++ +K YE
Sbjct: 3 EKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 339 IAKKNKEKYNEEMEAY 354
+A+ +K +Y +EM Y
Sbjct: 63 LAELDKARYQQEMMNY 78
>gi|444708344|gb|ELW49421.1| High mobility group protein B1 [Tupaia chinensis]
Length = 302
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 35/183 (19%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KKE+P F E + +WK +SA++K +E+ +A+K Y
Sbjct: 16 YAFFVQTCQEEHKKEHPGVSVNFSEFSKKCSERWKIMSAKKKGKFEDTAKADKVHY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E K K KDP PK P +A+F
Sbjct: 72 ---ERE-------------------IKTYIPPKGETKK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLAD-NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
LF S+ R + ++ +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSDYRPKIKEHPGLSIGDVAKKLGEMWNNTATDDKQPYEKKAAKLKEKYEKDIAAYQA 163
Query: 357 RMK 359
+ K
Sbjct: 164 KGK 166
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 42/201 (20%)
Query: 170 CAERKRPSPP------YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKP 221
C R P+ P Y + + E KK++P++ F E + +WK +SA+EK
Sbjct: 114 CRSRGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSK 173
Query: 222 YEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPK 281
+E+ +++K Y + E K + ++ + A
Sbjct: 174 FEDMAKSDKARY-----------------DREMKNYVPPKGDKKGKKKDPNA-------- 208
Query: 282 KEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEI 339
PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+
Sbjct: 209 -------PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 261
Query: 340 AKKNKEKYNEEMEAYKRRMKE 360
A K KEKY +++ AY+ + K
Sbjct: 262 AAKLKEKYEKDIAAYRAKGKS 282
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K K+KDP PK P +A+F
Sbjct: 76 --------------------------KNYV-----PPKGGDKRGKKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 105 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 97 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 156
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 157 EKDIAAYR 164
>gi|76559898|ref|NP_958455.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily E member 1 [Danio rerio]
gi|42542933|gb|AAH66435.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Danio rerio]
gi|76496509|gb|AAH44363.2| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily e, member 1 [Danio rerio]
gi|182891542|gb|AAI64725.1| Smarce1 protein [Danio rerio]
Length = 420
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 28/147 (19%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK-------- 230
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK
Sbjct: 70 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNEYEAEKIEYNDSLK 129
Query: 231 -----EAYLQ-VMAKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKKPKKE 283
AYL V AK R E+ LEEE +Q+ + ++ E Y+ + D P
Sbjct: 130 AYHNSPAYLAYVNAKNRAEA----ALEEESRQRQSRLDKGEPYMSIQPAED-----PDDY 180
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLAD 310
D KH A F +R L++D
Sbjct: 181 DDGFSMKHTAAARF----QRNHRLISD 203
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++ +FLF + +RA + + N V +VAK GE+WKN++ K YE+ A K
Sbjct: 95 DPDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAK 154
Query: 343 NKEKYNEEMEAY 354
K +Y ++MEAY
Sbjct: 155 EKIRYEKDMEAY 166
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
KR P+ L+C + E KK +P ++ LG +WKNVSA +K YE+ +Y
Sbjct: 100 KRNLSPFFLFCNVKRAEVKKVHPNWGVGDVAKALGEQWKNVSAADKAKYEKEAAKEKIRY 159
Query: 227 QAEKEAY 233
+ + EAY
Sbjct: 160 EKDMEAY 166
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P F E + +WK +SA+EK +E+ + +K Y
Sbjct: 18 FVATCRE---EHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDLAKNDKVRY---- 70
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT + K KK+KDP PK P +A+F
Sbjct: 71 ---------------EREMKTYIPPKGA-----------PGKGKKKKDPNAPKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F S+ R + +N + ++AK GE W T + K PYE A K KEKY +++ AYK
Sbjct: 105 VFCSDHRPRIKEENPGISIGDIAKKLGEFWSTQTSKDKVPYEARAGKLKEKYEKDVAAYK 164
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE-------EKY 226
KRP + ++C D K+ENP +I LG W ++++K PYE EKY
Sbjct: 97 KRPPSAFFVFCSDHRPRIKEENPGISIGDIAKKLGEFWSTQTSKDKVPYEARAGKLKEKY 156
Query: 227 QAEKEAY 233
+ + AY
Sbjct: 157 EKDVAAY 163
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KP+ ++Y F + E + + E +K E WK M+ ++K +E++
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDL 62
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y EM+ Y
Sbjct: 63 AKNDKVRYEREMKTY 77
>gi|66358478|ref|XP_626417.1| high mobility group small protein [Cryptosporidium parvum Iowa II]
gi|46227992|gb|EAK88912.1| high mobility group small protein [Cryptosporidium parvum Iowa II]
Length = 98
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 291 HPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
+TA+ F+S RRA + A N V EVAKI GEEW+ M+E K P+++ A +K++
Sbjct: 28 RAMTAFMYFASSRRAEITAANPSLRSQVAEVAKILGEEWRGMSESDKAPFQKQADADKKR 87
Query: 347 YNEE 350
Y E
Sbjct: 88 YERE 91
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +S +EK +E+ + +K Y + M
Sbjct: 18 FVQTCRE---EHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMAKQDKVRYEREM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + K K+ KDP PK P +A+F
Sbjct: 75 --------------------------------KNYVPPKGHKKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF +E R + ++N + + AK GE W + T E+K+PYE+ A K KEKY++++ AY+
Sbjct: 103 LFCAELRPKVKSENPGLTIGDTAKKLGEMWNSKTAEEKQPYEKKAAKLKEKYDKDIVAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 TKGK 166
>gi|432104603|gb|ELK31215.1| High mobility group protein B1 [Myotis davidii]
Length = 201
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 36/182 (19%)
Query: 182 LWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
+ + W+E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 18 FFVQTYWDEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY------ 71
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLF 299
+RE ++ Y+ K E KDP +PK P +A+FLF
Sbjct: 72 -KRE-------------------MKTYIPPKGETKNTF------KDPNEPKRPPSAFFLF 105
Query: 300 SSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
SE + ++ + ++A+ GE W N + K+P+E+ A K KEKY +++ A++ +
Sbjct: 106 CSEYCPKIKGEHPGLSIGDIAEKLGEMWNNTAADDKQPHEKKAAKLKEKYEKDIAAHRAK 165
Query: 358 MK 359
K
Sbjct: 166 GK 167
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 172 ERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKE 231
E KRP + L+C + + K E+P +I LG W N +A++K+P+E+K KE
Sbjct: 94 EPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDIAEKLGEMWNNTAADDKQPHEKKAAKLKE 153
Query: 232 AYLQVMAKER 241
Y + +A R
Sbjct: 154 KYEKDIAAHR 163
>gi|146412508|ref|XP_001482225.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
gi|146392989|gb|EDK41147.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
Length = 90
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N + +V K+ GE+WK M ++K PYE A+
Sbjct: 13 DPDAPKRSLSAYMFFANENRDIIRAENPGIAFGQVGKLLGEKWKAMNADEKVPYETKAEA 72
Query: 343 NKEKYNEEMEAYKRR 357
+K++Y +E Y +R
Sbjct: 73 DKKRYEKEKAEYAKR 87
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP F ++ +LG KWK ++A+EK PYE K +A+K+ Y
Sbjct: 18 KRSLSAYMFFANENRDIIRAENPGIAFGQVGKLLGEKWKAMNADEKVPYETKAEADKKRY 77
>gi|47228066|emb|CAF97695.1| unnamed protein product [Tetraodon nigroviridis]
Length = 662
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 277 NKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKR 334
NKK +K+KDP +P+ PV+AY LF + +AA+ N + EV+KI W ++ EEQK+
Sbjct: 267 NKKARKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSASFGEVSKIVASMWDSLAEEQKQ 326
Query: 335 PYEEIAKKNKEKYNEEMEAYK 355
Y+ + K++Y + + AYK
Sbjct: 327 VYKRKTEAAKKEYLKALAAYK 347
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 151 TLPI-VQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGA 209
T P+ V + ++ RKKK E ++P Y L+ +D K +NP A F E++ I+ +
Sbjct: 256 TAPLSVPGMAGNKKARKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSASFGEVSKIVAS 315
Query: 210 KWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEE 252
W +++ E+K+ Y+ K +A K+ YL+ +A + + + EE
Sbjct: 316 MWDSLAEEQKQVYKRKTEAAKKEYLKALAAYKANQLSQPITEE 358
>gi|229368114|gb|ACQ59037.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 206
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +S +EK +E+ L
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSLKEKGKFED---------LARQ 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E M + +K KK KDP PK P +A+F
Sbjct: 66 DKARYEREMMSYIPPRGIKK-----------------------KKFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F +E R + + + +VAK GE W E ++P+E+ A K KEKY +E+ AY+
Sbjct: 103 IFCAEYRPKVKGETPGATIGDVAKRLGEMWNGTASEDRQPFEKKAAKLKEKYEKEVAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 AKTK 166
>gi|89475586|gb|ABD73318.1| high-mobility group box 1 [Oncorhynchus mykiss]
Length = 154
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 39/161 (24%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +W+ +SA+EK +E+ L +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFED---------LAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E + Y+ K E K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MRSYIPPKGE------KKKRFKDPNAPKRPSSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
+F ++ R + + + +VAK GE+W N+T E K PY
Sbjct: 103 IFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRPS + ++C D + K E P ++ LG KW N++AE+K PY
Sbjct: 95 KRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEI 339
KDP KP+ +++Y F E + + N E +K E W+ M+ ++K +E++
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|344253440|gb|EGW09544.1| High mobility group protein B1 [Cricetulus griseus]
Length = 169
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 37/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + W E KK++P+A F E+ +WK +SA+EK +E+ +A K Y
Sbjct: 16 YAFFVQTCWEEHKKKHPDASVNFSELLKKCSERWKTMSAKEKGKFEDMAKAGKAHY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT + + + KK KD PK P +A+F
Sbjct: 72 ---------------EREMKTYIP--------------KGETKKKFKDSNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE + ++ + +VAK GE+W N K+PYE+ A K KEKY +++ AY+
Sbjct: 103 LFCSEYCPKIKGEHPGLSLGDVAKKLGEKWNNTAAGDKQPYEKKAAKLKEKYEKDIVAYR 162
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG KW N +A +K+PYE+K KE Y
Sbjct: 95 KRPPSAFFLFCSEYCPKIKGEHPGLSLGDVAKKLGEKWNNTAAGDKQPYEKKAAKLKEKY 154
Query: 234 LQVMAKERRESEAM 247
+ + R + M
Sbjct: 155 EKDIVAYRAKGNLM 168
>gi|414886617|tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 119
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKR 334
+K K EKDP KPK P +A+F+F E R + NV +V+ I G++WK++++ +K
Sbjct: 17 RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKA 76
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
PY A+K K +Y ++++AY
Sbjct: 77 PYVSKAEKLKAEYTKKIDAY 96
>gi|388499756|gb|AFK37944.1| unknown [Lotus japonicus]
Length = 197
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 279 KPKKEKDPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRP 335
K KK +DP +PK P TA+F+F + R N K+V V K GE+W+ MT+E+K+P
Sbjct: 92 KAKKVEDPNQPKRPPTAFFVFLDDFRKEFKEANPGSKDVKRVGKEGGEKWRAMTDEEKKP 151
Query: 336 YEEIAKKNKEKYNEEMEAY 354
Y E + KE+Y + M Y
Sbjct: 152 YLEKVAELKEEYEKAMANY 170
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEA-EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
KRP + ++ D E K+ NP + + K + G KW+ ++ EEKKPY EK KE
Sbjct: 103 KRPPTAFFVFLDDFRKEFKEANPGSKDVKRVGKEGGEKWRAMTDEEKKPYLEKVAELKEE 162
Query: 233 YLQVMA 238
Y + MA
Sbjct: 163 YEKAMA 168
>gi|384487819|gb|EIE79999.1| hypothetical protein RO3G_04704 [Rhizopus delemar RA 99-880]
Length = 99
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + KENPEA+F EI ILGAKWK ++ EEKKP+ EK +A+K+ Y
Sbjct: 31 KRALSAYMFFSQANREKVIKENPEAKFGEIGKILGAKWKEMTEEEKKPFVEKAEADKKRY 90
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK ++AY FS R ++ +N E+ KI G +WK MTEE+K+P+ E A+ +
Sbjct: 27 PNAPKRALSAYMFFSQANREKVIKENPEAKFGEIGKILGAKWKEMTEEEKKPFVEKAEAD 86
Query: 344 KEKYNEE 350
K++Y +E
Sbjct: 87 KKRYEDE 93
>gi|145347793|ref|XP_001418346.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578575|gb|ABO96639.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 95
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P++AY F+ ++RAA+L N V +VAK G +W T++ K YE A K
Sbjct: 24 DPNAPKRPLSAYMFFAKDQRAAILKKNPSFGVTDVAKALGAQWAKTTDKSK--YEAEAAK 81
Query: 343 NKEKYNEEMEAYKR 356
+K++Y M YK+
Sbjct: 82 DKKRYEAAMAKYKK 95
>gi|414886615|tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 123
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKR 334
+K K EKDP KPK P +A+F+F E R + NV +V+ I G++WK++++ +K
Sbjct: 17 RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKA 76
Query: 335 PYEEIAKKNKEKYNEEMEAYKRRMKEL 361
PY A+K K +Y ++++AY + L
Sbjct: 77 PYVSKAEKLKAEYTKKIDAYNNKQVHL 103
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P +PK P +AYFL+ +E RA++ ++ ++ E++K+ E+WK + EE+K+ Y+ A
Sbjct: 23 PNRPKKPQSAYFLYLNEHRASIKEEHPDIKFTEISKVASEQWKALGEEEKKEYQAKADAA 82
Query: 344 KEKYNEEMEAY 354
+E+Y ++ME Y
Sbjct: 83 REQYKKDMEKY 93
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y L+ + K+E+P+ +F EI+ + +WK + EEKK Y+ K A +E Y
Sbjct: 27 KKPQSAYFLYLNEHRASIKEEHPDIKFTEISKVASEQWKALGEEEKKEYQAKADAAREQY 86
Query: 234 LQVMAK 239
+ M K
Sbjct: 87 KKDMEK 92
>gi|123445154|ref|XP_001311340.1| HMG box family protein [Trichomonas vaginalis G3]
gi|121893145|gb|EAX98410.1| HMG box family protein [Trichomonas vaginalis G3]
Length = 96
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 176 PSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEK 230
P+ PYI++ K++ + K ENP F +I LG WKN+S EEKKPY EK +AEK
Sbjct: 2 PASPYIIFSKEKRPQVKAENPGISFGDIAKKLGEMWKNMSEEEKKPYIEKAEAEK 56
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P + Y +FS E+R + A+N + ++AK GE WKNM+EE+K+PY E A+ K ++ +
Sbjct: 2 PASPYIIFSKEKRPQVKAENPGISFGDIAKKLGEMWKNMSEEEKKPYIEKAEAEKAEHKD 61
Query: 350 E 350
+
Sbjct: 62 D 62
>gi|224112525|ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
gi|222865260|gb|EEF02391.1| high mobility group family [Populus trichocarpa]
Length = 176
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R ++ NV V K GE+WK+++ +K PYE A
Sbjct: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSAAEKAPYEAKA 110
Query: 341 KKNKEKYNEEMEAYKRR 357
K K Y + M AY ++
Sbjct: 111 AKRKSDYEKLMTAYNKK 127
>gi|443895134|dbj|GAC72480.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 99
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 161 KEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKK 220
K + KK A KRP Y+ + +D K+ NPEA F ++ +LGAKWK +S EKK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKQANPEAGFGDVGRLLGAKWKEMSEAEKK 75
Query: 221 PYEE 224
PY +
Sbjct: 76 PYND 79
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKN 327
K + + K +KDP PK P++AY FS + R + N +V ++ G +WK
Sbjct: 9 KSSTSTQKRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKQANPEAGFGDVGRLLGAKWKE 68
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAYKRR 357
M+E +K+PY ++A ++K + E AY +R
Sbjct: 69 MSEAEKKPYNDMATRDKARAEAEKAAYSKR 98
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + ++N +V +V ++ GE WK +T ++K PYE A+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDVTFGQVGRLLGERWKALTPDEKTPYESKAEA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP+ F ++ +LG +WK ++ +EK PYE K +A+K+ Y
Sbjct: 22 KRALSAYMFFANENRDIVRSENPDVTFGQVGRLLGERWKALTPDEKTPYESKAEADKKRY 81
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P +A+FLF SE R + ++ + + AK GE W + + K+PYE+ A K
Sbjct: 40 DPNAPKRPPSAFFLFCSEHRPKIKNEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 99
Query: 343 NKEKYNEEMEAYKRRMK 359
KEKY +++ AY+ + K
Sbjct: 100 LKEKYEKDIAAYRAKSK 116
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 45 KRPPSAFFLFCSEHRPKIKNEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 104
Query: 234 LQVMAKERRESEA 246
+ +A R +S++
Sbjct: 105 EKDIAAYRAKSKS 117
>gi|148703464|gb|EDL35411.1| mCG50005 [Mus musculus]
Length = 206
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y L+ K W E KK++P+A F + +W +SA+EK +E +A+K Y
Sbjct: 16 YALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWNTMSAKEKGKFEGMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E E K A + + KK KDP PK P +A+F
Sbjct: 72 -------------EREMKTYIAPKGKTK---------------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAKDKQPYEKKAAKLKEKYKKDIAAYR 163
>gi|123474430|ref|XP_001320398.1| HMG box family protein [Trichomonas vaginalis G3]
gi|121903202|gb|EAY08175.1| HMG box family protein [Trichomonas vaginalis G3]
Length = 94
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 176 PSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
P PYI +C+++ + K+ENP F +I LG WKN+S EEKKPY E + +KEA+
Sbjct: 2 PKSPYIFFCQEKRPQVKEENPGIAFGDIAKKLGEMWKNLSEEEKKPYMEMAEKDKEAH 59
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 292 PVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY 347
P + Y F E+R + +N + ++AK GE WKN++EE+K+PY E+A+K+KE +
Sbjct: 2 PKSPYIFFCQEKRPQVKEENPGIAFGDIAKKLGEMWKNLSEEEKKPYMEMAEKDKEAH 59
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK ++AY F++E+R + +N + EV K+ GE+WK + E+QK PYE A +
Sbjct: 27 PNMPKRGLSAYMFFANEQRDKVRDENPGIKFGEVGKMLGEKWKALGEKQKAPYEAKAAAD 86
Query: 344 KEKYNEEMEAY 354
K++Y EE AY
Sbjct: 87 KKRYEEEKAAY 97
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ + ENP +F E+ +LG KWK + ++K PYE K A+K+ Y
Sbjct: 31 KRGLSAYMFFANEQRDKVRDENPGIKFGEVGKMLGEKWKALGEKQKAPYEAKAAADKKRY 90
>gi|414886614|tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 118
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKR 334
+K K EKDP KPK P +A+F+F E R + NV +V+ I G++WK++++ +K
Sbjct: 17 RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKA 76
Query: 335 PYEEIAKKNKEKYNEEMEAYKRRMKEL 361
PY A+K K +Y ++++AY + L
Sbjct: 77 PYVSKAEKLKAEYTKKIDAYNNKQVHL 103
>gi|162459697|ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
gi|17017392|gb|AAL33650.1|AF440221_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEV---AKITGEEWKNMTEEQKR 334
+K K EKDP KPK P +A+F+F E R + NV +V K G++WK++++ +K
Sbjct: 17 RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIGKAGGDKWKSLSDAEKA 76
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
PY A+K K +Y ++++AY
Sbjct: 77 PYVSKAEKLKAEYTKKIDAY 96
>gi|551090|gb|AAA50238.1| DNA-binding protein [Drosophila melanogaster]
Length = 393
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 33/180 (18%)
Query: 180 YILWCKDQWNEAKKENPE--AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+ F E + +WK + +EKK + E AEK+
Sbjct: 189 FVQTCRE---EHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE--MAEKD------ 237
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K+R E+E ++ Y+ K KK K+ KDP PK ++A+F
Sbjct: 238 -KQRYEAE-----------------MQNYVPPKGALWDRGKKRKQIKDPNAPKRSLSAFF 279
Query: 298 LFSSERRAALLADNK--NVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
F ++ R + A N V ++AK G +W ++ E K+ YE +A+++K +Y EM YK
Sbjct: 280 WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 339
>gi|403347541|gb|EJY73196.1| hypothetical protein OXYTRI_05674 [Oxytricha trifallax]
Length = 710
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 96/190 (50%), Gaps = 27/190 (14%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
++P Y+++ K + + ++NP + E+ + W+ +S EEK Y+++ + K +
Sbjct: 136 RKPQSAYVIFGKMKRDLIMRQNPGIKVTEVVKQIAKLWQALSKEEKLRYKDRAKQGKFEF 195
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V ++ ++++ E+Y+Q +E K NK + KPK P+
Sbjct: 196 YDVSSQ--------NIIDK-----------ERYIQELRELTKSNKNLE------KPKKPL 230
Query: 294 TAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM 351
T Y LF E R ++ +N N+ L++ K G W+N+T+++ + ++ + + E+Y +E
Sbjct: 231 TPYMLFVRETRPKVVRENPNIASLDIMKEVGRIWQNITKDELQYFKIKSDSDMERYKKEH 290
Query: 352 EAYKRRMKEL 361
+ + + + +L
Sbjct: 291 QKFIQDINDL 300
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 288 KPKHPVTAYFLFSSERRAAL------LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
+PK P++AY FS E R L + N E+ + +W++M +QK PY ++A
Sbjct: 405 RPKKPLSAYIYFSQEFREKLKEQHPEWSSN----EIMRHVSNKWQHMDRQQKDPYNQMAA 460
Query: 342 KNKEKYNEEM 351
+K +Y++++
Sbjct: 461 LDKSRYDKQL 470
>gi|365764630|gb|EHN06152.1| Ixr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 591
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 356 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 415
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 416 RVV---------------RDAYEKT----------------------------LPPKRPS 432
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 433 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 355 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 414
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 415 YRVVRDAYEKTL 426
>gi|67598449|ref|XP_666220.1| high mobility group protein [Cryptosporidium hominis TU502]
gi|54657173|gb|EAL35991.1| high mobility group protein [Cryptosporidium hominis]
Length = 95
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 291 HPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
+TA+ F+S RRA + A N V EVAKI GEEW+ M+E K P+++ A +K++
Sbjct: 25 RAMTAFMYFASSRRAEITAANPSLRSQVAEVAKILGEEWRGMSESDKAPFQKQADADKKR 84
Query: 347 YNEE 350
Y E
Sbjct: 85 YERE 88
>gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +S +EK +E+ + +K Y + M
Sbjct: 18 FVQTCRE---EHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMAKQDKVRYEREM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + K K+ KDP PK P +A+F
Sbjct: 75 --------------------------------KNYVPPKGHKKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF +E R + ++N + + AK GE W + T E K+PYE+ A K KEKY++++ AY+
Sbjct: 103 LFCAEFRPKVKSENPGLTIGDTAKKLGEMWNSKTAEDKQPYEKKAAKLKEKYDKDIVAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 TKGK 166
>gi|444731734|gb|ELW72082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 34/152 (22%)
Query: 210 KWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQF 269
+WK +SA+EK +E+ + +K Y E + KT Y+
Sbjct: 42 RWKTMSAKEKGKFEDMAKVDKACY-------------------EREMKT-------YIPP 75
Query: 270 KQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKN 327
K E KK KDP PK P +A+FLF SE R + ++ + +VAK GE W N
Sbjct: 76 KGETK------KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLPIGDVAKKLGEMWIN 129
Query: 328 MTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
++K+PYE+ A K KEKY +++ AY+ + K
Sbjct: 130 TAADEKQPYEKKAAKLKEKYEKDIAAYQAKGK 161
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP KP+ +++Y F RR+ + + + E ++ E WK M+ ++K +E++AK +K
Sbjct: 5 DPKKPRGKMSSYAFFVHTRRSTQMLQSTS--EFSEKCSERWKTMSAKEKGKFEDMAKVDK 62
Query: 345 EKYNEEMEAY 354
Y EM+ Y
Sbjct: 63 ACYEREMKTY 72
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A+EK+PY
Sbjct: 90 KRPPSAFFLFCSEYRPKIKGEHPGLPIGDVAKKLGEMWINTAADEKQPY 138
>gi|409049822|gb|EKM59299.1| hypothetical protein PHACADRAFT_249698 [Phanerochaete carnosa
HHB-10118-sp]
Length = 580
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 21/147 (14%)
Query: 208 GAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLE-EEHKQKTAMELLEQY 266
G ++ +S+EEK+PY + QA KEA +ER S M+ L E+ K++ A ++
Sbjct: 376 GQEYARLSSEEKEPYRRRSQAAKEA------REREHSAYMRTLTPEDIKRENAFRTAQR- 428
Query: 267 LQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERR--AAL----LADNKNVLEVAKI 320
+A K K KDP PK P++AYF+F R AAL D + + +
Sbjct: 429 -----KAGKSRKG--NIKDPNAPKKPLSAYFMFLQRIRSDAALVLEVFGDETETTKQSVL 481
Query: 321 TGEEWKNMTEEQKRPYEEIAKKNKEKY 347
+W++MT+E+++P+ A++ K +Y
Sbjct: 482 AAAKWRSMTDEERKPFLAQAEQEKLEY 508
>gi|22135473|gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
gi|194698578|gb|ACF83373.1| unknown [Zea mays]
gi|414886616|tpg|DAA62630.1| TPA: HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 278 KKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT---GEEWKNMTEEQKR 334
+K K EKDP KPK P +A+F+F E R + NV +V+ I G++WK++++ +K
Sbjct: 17 RKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKA 76
Query: 335 PYEEIAKKNKEKYNEEMEAY 354
PY A+K K +Y ++++AY
Sbjct: 77 PYVSKAEKLKAEYTKKIDAY 96
>gi|256272450|gb|EEU07431.1| Ixr1p [Saccharomyces cerevisiae JAY291]
Length = 583
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 48/179 (26%)
Query: 166 KKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK 225
KK+G KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+
Sbjct: 342 KKQGP---KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEE 398
Query: 226 YQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKD 285
++ E Y V + +KT
Sbjct: 399 FRTNWEKYRVV---------------RDAYEKT--------------------------- 416
Query: 286 PLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
L PK P + F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 417 -LPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 474
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 346 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 405
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 406 YRVVRDAYEKTL 417
>gi|392876906|gb|AFM87285.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F + R + +N + +VAK GE W +T + K+PYEE + KEKY +
Sbjct: 97 PPSAFFIFCFDHRLRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP + ++C D + ENP ++ +G W ++A++KKPYEE+ KE Y
Sbjct: 96 RPPSAFFIFCFDHRLRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYE 155
Query: 235 QVMAKER 241
+ +A R
Sbjct: 156 KEVAAYR 162
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + ++N ++ +V K GE+WK +T E+K+PYE A+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP+ F ++ LG KWK ++ EEK+PYE K QA+K+ Y
Sbjct: 22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRY 81
>gi|323347802|gb|EGA82066.1| Ixr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 592
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 357 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 416
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 417 RVV---------------RDAYEKT----------------------------LPPKRPS 433
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 434 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 484
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 356 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 415
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 416 YRVVRDAYEKTL 427
>gi|351725417|ref|NP_001235556.1| uncharacterized protein LOC100305961 [Glycine max]
gi|255627113|gb|ACU13901.1| unknown [Glycine max]
Length = 169
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+ +F E R A+N K V V K GE+WK+++ +K PYE A
Sbjct: 49 DPNKPKRPPSAFLVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAA 108
Query: 342 KNKEKYNEEMEAYKRR 357
K K +Y + ++AY+++
Sbjct: 109 KRKAEYEKLIKAYEKK 124
>gi|323332798|gb|EGA74203.1| Ixr1p [Saccharomyces cerevisiae AWRI796]
Length = 588
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 356 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 415
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 416 RVV---------------RDAYEKT----------------------------LPPKRPS 432
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 433 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 355 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 414
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 415 YRVVRDAYEKTL 426
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 145
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R + NK+V V K G+ WK+M+E +K P+ A+
Sbjct: 34 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDRWKSMSESEKAPFVAKAE 93
Query: 342 KNKEKYNEEMEAYKRRMKE 360
K K +Y ++++AY + E
Sbjct: 94 KRKIEYEKKLKAYNKGQAE 112
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 39/180 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ + +K Y + M
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYEREM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K E K K+ KDP PK P +A+F
Sbjct: 75 --------------------------KNYIPPKGE------KKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F + R + +N + ++AK GE W + + E K+PYE+ A K KEKY++++ Y+
Sbjct: 103 IFCGDYRPKIKGENPGLSIGDIAKKLGEMWNSSSAEVKQPYEKKAAKLKEKYDKDIALYR 162
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + ++C D + K ENP +I LG W + SAE K+PYE+K KE Y
Sbjct: 95 KRPPSAFFIFCGDYRPKIKGENPGLSIGDIAKKLGEMWNSSSAEVKQPYEKKAAKLKEKY 154
Query: 234 LQVMAKERRESEA 246
+ +A R + A
Sbjct: 155 DKDIALYRTKGIA 167
>gi|312381012|gb|EFR26863.1| hypothetical protein AND_06768 [Anopheles darlingi]
Length = 333
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
D PKHP+T Y + +E R + + N+ +++ K+ E+W + E++K+PY E A+
Sbjct: 72 DANAPKHPLTGYVRYMNEHRDGVRQKHPNLSHMDLTKLMAEDWSKLPEDKKKPYLEAAEA 131
Query: 343 NKEKYNEEMEAYK 355
+KE+YN+E+ YK
Sbjct: 132 DKERYNKEILEYK 144
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + ++N ++ +V K GE+WK +T E+K+PYE A+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP+ F ++ LG KWK ++ EEK+PYE K QA+K+ Y
Sbjct: 22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRY 81
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + ++N ++ +V K GE+WK +T E+K+PYE A+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP+ F ++ LG KWK ++ EEK+PYE K QA+K+ Y
Sbjct: 22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRY 81
>gi|119588737|gb|EAW68331.1| hCG1991922, isoform CRA_a [Homo sapiens]
gi|119588738|gb|EAW68332.1| hCG1991922, isoform CRA_a [Homo sapiens]
Length = 188
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P +A+FL+ SE + + + +VAK GE W N + K+PYE+
Sbjct: 36 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 95
Query: 339 IAKKNKEKYNEEMEAYKRRMKE 360
+ K KEKY +++ AY+ + K
Sbjct: 96 RSAKLKEKYEKDIAAYRAKGKH 117
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+ + + K E P F ++ LG W N +A++K+PYE++ KE Y
Sbjct: 45 KRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKY 104
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 105 EKDIAAYR 112
>gi|359386154|gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
Length = 165
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNV---LEVAKITGEEWKNMTEEQKRPYEEIA 340
KDP KPK P +A+F+F E R ++ NV V K GE+WK++T+ +K P+E A
Sbjct: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
Query: 341 KKNKEKYNEEMEAYKRR 357
K K Y + M AY ++
Sbjct: 111 AKRKLDYEKLMTAYNKK 127
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + ++N ++ +V K GE+WK +T E+K+PYE A+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP+ F ++ LG KWK ++ EEK+PYE K QA+K+ Y
Sbjct: 22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRY 81
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+ A K
Sbjct: 127 PNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSQQSAKDKQPYEQKAAKL 186
Query: 344 KEKYNEEMEAYKRRMK 359
KEKY +++ AY+ + K
Sbjct: 187 KEKYEKDIAAYRAKGK 202
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 131 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSQQSAKDKQPYEQKAAKLKEKY 190
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 191 EKDIAAYR 198
>gi|302414302|ref|XP_003004983.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356052|gb|EEY18480.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 220
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
P+ P +AY LFS++ R L N E+AK+ GE W++++ +K P+E A KEKYN
Sbjct: 116 PERPPSAYVLFSNKMRDDLKGRNLTFTEIAKLVGENWQSLSPVEKEPFETQALNAKEKYN 175
Query: 349 EEM 351
+++
Sbjct: 176 QDL 178
>gi|393907418|gb|EFO24137.2| structure-specific recognition protein 1 [Loa loa]
Length = 685
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP PK P +AYF++ E ++ + +V E A+ G+ WK + EE K+ YEE AK++K
Sbjct: 545 DPNAPKKPQSAYFIWFGENYSSFKKEGVSVTEAAQKAGKMWKEIDEETKKKYEERAKEDK 604
Query: 345 EKYNEEMEAY 354
E+Y EM+ Y
Sbjct: 605 ERYAREMKEY 614
>gi|312074352|ref|XP_003139932.1| structure-specific recognition protein 1 [Loa loa]
Length = 682
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
DP PK P +AYF++ E ++ + +V E A+ G+ WK + EE K+ YEE AK++K
Sbjct: 542 DPNAPKKPQSAYFIWFGENYSSFKKEGVSVTEAAQKAGKMWKEIDEETKKKYEERAKEDK 601
Query: 345 EKYNEEMEAY 354
E+Y EM+ Y
Sbjct: 602 ERYAREMKEY 611
>gi|449269673|gb|EMC80424.1| High mobility group protein B1 [Columba livia]
Length = 209
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 36/161 (22%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +S++EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKADKLRY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E+E ++ Y+ K E KK KDP PK P +A+F
Sbjct: 72 -------------EKE---------MKNYVPPKGETK------KKFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
LF SE R + ++ + +VAK GE W N + K+PY
Sbjct: 104 LFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 96 KRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSS----ERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP KP+ +++Y F E + + N E +K E WK M+ ++K +E++A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMA 64
Query: 341 KKNKEKYNEEMEAY 354
K +K +Y +EM+ Y
Sbjct: 65 KADKLRYEKEMKNY 78
>gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis]
Length = 220
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPYE 337
KK +DP +PK P TA+F+F + R N K +V K G +WK M++E K+PY
Sbjct: 100 KKARDPNQPKKPATAFFVFMDDFRKTYKETNPDVKGAAQVGKEGGLKWKAMSDEDKKPYL 159
Query: 338 EIAKKNKEKYNEEMEAYKRRMKE 360
E A + K +Y + M Y++ +K+
Sbjct: 160 EKAAELKAEYEKAMSKYQQDLKD 182
>gi|311109|gb|AAA02859.1| intrastrand crosslink recognition protein [Saccharomyces
cerevisiae]
Length = 591
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 356 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 415
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 416 RVV---------------RDAYEKT----------------------------LPPKRPS 432
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 433 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 355 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 414
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 415 YRVVRDAYEKTL 426
>gi|94966915|ref|NP_001035652.1| high mobility group protein B4 [Bos taurus]
gi|119370723|sp|Q32L34.1|HMGB4_BOVIN RecName: Full=High mobility group protein B4
gi|81673105|gb|AAI09791.1| High-mobility group box 4 [Bos taurus]
gi|296488916|tpg|DAA31029.1| TPA: high mobility group protein B4 [Bos taurus]
Length = 194
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE L +
Sbjct: 16 YIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA---------LAKL 66
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R + E M K ++++DP P+ P +++
Sbjct: 67 DKARYQEEMMNYFGRRKK-------------------------RRKRDPHAPRRPPSSFL 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF + A L ++N + V++VAK +G+ W T+ K+PYE+ A + KY EE+ Y+
Sbjct: 102 LFCQDHYAQLKSENPSWSVVQVAKASGKMWSAKTDVDKQPYEQRAALLRAKYREELSVYR 161
Query: 356 RRM 358
+
Sbjct: 162 NQF 164
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
+RP ++L+C+D + + K ENP ++ G W + +K+PYE++ + Y
Sbjct: 94 RRPPSSFLLFCQDHYAQLKSENPSWSVVQVAKASGKMWSAKTDVDKQPYEQRAALLRAKY 153
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMEL 262
+ ++ R + A K +E E
Sbjct: 154 REELSVYRNQFNARKTCLQESATNQCREF 182
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEEI 339
+D LKPK V++Y F R N E ++ E+W+++++ +K YE +
Sbjct: 4 RDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEAL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y EEM Y
Sbjct: 64 AKLDKARYQEEMMNY 78
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Query: 180 YILWCKDQWNEAKKENP--EAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + D E K+++P F E + +WK +SA+EK +EE + +K Y + M
Sbjct: 10 YAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKTDKIRYDREM 69
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K KK+KDP PK P +A+F
Sbjct: 70 --------------------------KTYIP----PKGAKGKGKKKKDPNAPKRPPSAFF 99
Query: 298 LFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + ++ + AK GE W + ++K PYE A K KEKY +E+ AY+
Sbjct: 100 VFCSEHRPRIKEECPGISIGDTAKKLGELWSTQSSKEKAPYEAKAAKLKEKYEKEVAAYR 159
>gi|207343448|gb|EDZ70902.1| YKL032Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 589
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 356 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 415
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 416 RVV---------------RDAYEKT----------------------------LPPKRPS 432
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 433 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 483
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 355 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 414
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 415 YRVVRDAYEKTL 426
>gi|302684321|ref|XP_003031841.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
gi|300105534|gb|EFI96938.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
Length = 114
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 270 KQEADKENKKPKK-EKDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWK 326
++ A K K P+K +KDP PK ++AY FS + R + A+N + E+ KI G +WK
Sbjct: 11 RKAATKSEKTPRKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDASFGELGKILGAKWK 70
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
M E++K+PY A K+KE+ + AY
Sbjct: 71 EMDEDEKKPYVAKAAKDKERAEADKAAY 98
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY-------EEKY 226
KR Y+ + +D K ENP+A F E+ ILGAKWK + +EKKPY +E+
Sbjct: 32 KRALSAYMFFSQDWRERVKAENPDASFGELGKILGAKWKEMDEDEKKPYVAKAAKDKERA 91
Query: 227 QAEKEAYLQVMAKERRESE 245
+A+K AY + + E E++
Sbjct: 92 EADKAAYDEKKSAEASEAD 110
>gi|193787044|dbj|BAG51867.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P +A+FLF SE R + ++ + +VAK GE W N + K+PYE+
Sbjct: 48 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 107
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
A K KEKY +++ AY+ + K
Sbjct: 108 KAAKLKEKYEKDIAAYRAKGK 128
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 57 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 116
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 117 EKDIAAYR 124
>gi|444728198|gb|ELW68662.1| High mobility group protein B1 [Tupaia chinensis]
Length = 132
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P +A+FLF SE R+ + ++ + +VAK GE W N + K+PYE+
Sbjct: 13 KKFKDPNAPKRPPSAFFLFCSEYRSKIKGEHPGLSNGDVAKKLGEIWNNTAADDKQPYEK 72
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
A K KEKY +++ AY+ + K
Sbjct: 73 KAAKLKEKYEKDIAAYRAKGK 93
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + ++ K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 22 KRPPSAFFLFCSEYRSKIKGEHPGLSNGDVAKKLGEIWNNTAADDKQPYEKKAAKLKEKY 81
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 82 EKDIAAYR 89
>gi|398364635|ref|NP_012893.3| Ixr1p [Saccharomyces cerevisiae S288c]
gi|547746|sp|P33417.2|IXR1_YEAST RecName: Full=Intrastrand cross-link recognition protein; AltName:
Full=Structure-specific recognition protein; Short=SSRP
gi|486034|emb|CAA81867.1| IXR1 [Saccharomyces cerevisiae]
gi|4467991|emb|CAB37853.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285813227|tpg|DAA09124.1| TPA: Ixr1p [Saccharomyces cerevisiae S288c]
gi|392298106|gb|EIW09204.1| Ixr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 597
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 362 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 421
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 422 RVV---------------RDAYEKT----------------------------LPPKRPS 438
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 439 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 489
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 361 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 420
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 421 YRVVRDAYEKTL 432
>gi|349579530|dbj|GAA24692.1| K7_Ixr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 598
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 363 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 422
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 423 RVV---------------RDAYEKT----------------------------LPPKRPS 439
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 440 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 490
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 362 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 421
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 422 YRVVRDAYEKTL 433
>gi|259147804|emb|CAY81054.1| Ixr1p [Saccharomyces cerevisiae EC1118]
Length = 598
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 363 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 422
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 423 RVV---------------RDAYEKT----------------------------LPPKRPS 439
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 440 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 490
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 362 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 421
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 422 YRVVRDAYEKTL 433
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +S +EK +E+ + +
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFED---------MAKL 65
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K R E E ++ Y+ K K K+ KDP PK P +A+F
Sbjct: 66 DKVRYERE-----------------MKNYIPPK------GHKKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF ++ R + D ++ + AK GE W + + E+K+PYE+ A K KEKY++++ AY+
Sbjct: 103 LFCADFRPKVKGDYPGLSIGDTAKKLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 TKGK 166
>gi|256089447|ref|XP_002580821.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|40365359|gb|AAR85353.1| high mobility group B1 protein [Schistosoma mansoni]
gi|66275796|gb|AAY44045.1| high mobility group B1 [Schistosoma mansoni]
gi|360043524|emb|CCD78937.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 176
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 34/163 (20%)
Query: 195 NPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEH 254
N +FK + +WKN+SA+EKK +++ +KE Y E EH
Sbjct: 32 NVTLDFKSFSKECSEQWKNLSAKEKKKFKDLADKDKERY---------------RCEMEH 76
Query: 255 KQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN- 313
++ AD E + K+++DP PK ++A+FLF ++ R + ++N +
Sbjct: 77 --------------YEPPAD-EGRSKKRKRDPDAPKKALSAFFLFCNDERPKVKSENPDW 121
Query: 314 -VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
V E+AK G+ W++ + K YE +A+ K++Y + M+ YK
Sbjct: 122 KVSEIAKELGKRWEHCKNKAK--YESLAQVEKQRYEKAMQKYK 162
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEEIA 340
D KPK + AY F RA + NV +K E+WKN++ ++K+ ++++A
Sbjct: 4 DKGKPKGAMNAYAAFLQSMRADHKKKHPNVTLDFKSFSKECSEQWKNLSAKEKKKFKDLA 63
Query: 341 KKNKEKYNEEMEAY 354
K+KE+Y EME Y
Sbjct: 64 DKDKERYRCEMEHY 77
>gi|401624856|gb|EJS42895.1| ixr1p [Saccharomyces arboricola H-6]
Length = 613
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 378 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 437
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 438 RVV---------------RDAYEKT----------------------------LPPKRPS 454
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 455 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 505
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 377 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 436
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 437 YRVVRDAYEKTL 448
>gi|67484144|ref|XP_657292.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474548|gb|EAL51913.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 114
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P +PK P T YF++ +E RA++ ++ ++ E++K+ E+WK + EE+K+ Y+ A
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIRFTEISKVASEQWKALGEEEKKEYQTKADAA 85
Query: 344 KEKYNEEMEAY 354
KE+Y ++ME Y
Sbjct: 86 KEQYKKDMEKY 96
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP PY ++ + K+E+P+ F EI+ + +WK + EEKK Y+ K A KE Y
Sbjct: 30 KRPPTPYFIYLNEHRASIKEEHPDIRFTEISKVASEQWKALGEEEKKEYQTKADAAKEQY 89
Query: 234 LQVMAK 239
+ M K
Sbjct: 90 KKDMEK 95
>gi|392873904|gb|AFM85784.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 292 PVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNE 349
P +A+F+F S+ R + +N + +VAK GE W +T + K+PYEE + KEK +
Sbjct: 97 PPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKCEK 156
Query: 350 EMEAYKRRMK 359
E+ AY+ R K
Sbjct: 157 EVAAYRARCK 166
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEK 225
RP + ++C D + ENP ++ +G W ++A++KKPYEE+
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGISIGDVAKKMGELWSGLTAKDKKPYEER 146
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 284 KDPLKPKHPVTAYFLF---SSERRAALLADNK-NVLEVAKITGEEWKNMTEEQKRPYEEI 339
+DP +P+ +++Y F S E D+ + E +K E WK MT + K +E++
Sbjct: 4 RDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEDL 63
Query: 340 AKKNKEKYNEEMEAY 354
AK +K +Y+ EM Y
Sbjct: 64 AKNDKVRYDREMRNY 78
>gi|242389922|dbj|BAH80451.1| putative HMG1 protein [Lentinula edodes]
Length = 560
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 23/159 (14%)
Query: 208 GAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYL 267
G ++ ++SAEEK+PY+ + QA KE A+ER + M+ L E ++ E
Sbjct: 376 GQEYASLSAEEKEPYKLRSQAMKE------AREREHAAYMRTLTPEDIKR------ENVF 423
Query: 268 QFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA------LLADNKNVLEVAKIT 321
+ Q +++K KDP PK P++AYF+F RA + D + + +
Sbjct: 424 RAAQRKAGKSRK-SNIKDPNAPKKPLSAYFMFLQRIRANPQLVQKVFGDETETTKQSVLA 482
Query: 322 GEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
+W++MT+++++P+ +A+ +EK E EA +R +E
Sbjct: 483 AAKWRSMTDDERKPF--LAQAEQEKM--EYEAARRLYEE 517
>gi|151941513|gb|EDN59876.1| intrastrand crosslink recognition protein [Saccharomyces cerevisiae
YJM789]
Length = 597
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 45/171 (26%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS Y L+ NE ++ PEA+ E++ + A+WK ++ ++KKP+ E+++ E Y
Sbjct: 362 KRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEKY 421
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
V + +KT L PK P
Sbjct: 422 RVV---------------RDAYEKT----------------------------LPPKRPS 438
Query: 294 TAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
+ F+ E R ++ +N K ++E+ KI GE W+ + +K Y E KK
Sbjct: 439 GPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKK 489
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 289 PKHPVTAYFLFSSERRAALL--ADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +AYFLFS R LL V E++K+ WK +T++QK+P+ E + N EK
Sbjct: 361 PKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKPFYEEFRTNWEK 420
Query: 347 YNEEMEAYKRRM 358
Y +AY++ +
Sbjct: 421 YRVVRDAYEKTL 432
>gi|444728196|gb|ELW68660.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P +A+FLF SE R+ + ++ + +VAK GE W N + K+PYE+
Sbjct: 102 KKFKDPNAPKRPPSAFFLFCSEYRSKIKGEHPGLSNGDVAKKLGEIWNNTAADDKQPYEK 161
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
A K KEKY +++ AY+ + K
Sbjct: 162 KAAKLKEKYEKDIAAYRAKGK 182
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + ++ K E+P ++ LG W N +A++K+PYE+K KE Y
Sbjct: 111 KRPPSAFFLFCSEYRSKIKGEHPGLSNGDVAKKLGEIWNNTAADDKQPYEKKAAKLKEKY 170
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 171 EKDIAAYR 178
>gi|12838247|dbj|BAB24141.1| unnamed protein product [Mus musculus]
Length = 181
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 38/180 (21%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
YI + + N+ K++ P FKE + KW+++S EK YE + +K Y Q
Sbjct: 16 YIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAEHDKARYQQ-- 73
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E M + + K++ +DP P+ P +++
Sbjct: 74 -------EMMNYIGKRRKRRK-------------------------RDPKAPRKPPSSFL 101
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LFS + A L +N + V++VAK G+ W E +K+PYE+ A + KY EE EAY+
Sbjct: 102 LFSRDHYAMLKQENPDWTVVQVAKAAGKMWSTTDEAEKKPYEQKAALMRAKYFEEQEAYR 161
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEE-------KY 226
++P ++L+ +D + K+ENP+ ++ G W EKKPYE+ KY
Sbjct: 94 RKPPSSFLLFSRDHYAMLKQENPDWTVVQVAKAAGKMWSTTDEAEKKPYEQKAALMRAKY 153
Query: 227 QAEKEAY 233
E+EAY
Sbjct: 154 FEEQEAY 160
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 283 EKDPLKPKHPVTAYFLFSSERRAALLADNKNVL----EVAKITGEEWKNMTEEQKRPYEE 338
EKD L+PK V++Y F R N E ++ E+W+++++ +K YE
Sbjct: 3 EKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 339 IAKKNKEKYNEEMEAY 354
+A+ +K +Y +EM Y
Sbjct: 63 LAEHDKARYQQEMMNY 78
>gi|444716453|gb|ELW57303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 213
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 36/181 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK +P+A F E + WK +SA+EK +E+ + +K Y
Sbjct: 4 YAFFVQTCREEHKKMHPDASVNFSEFSKKCSESWKTMSAKEKGKFEDMAKVDKALY---- 59
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
RE ++ Y+ K E KK KDP PK P +A+F
Sbjct: 60 ---ERE-------------------MKTYIPPKGET-------KKFKDPNAPKRPPSAFF 90
Query: 298 LFSSERRAALLAD-NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKR 356
LF SE R + ++ +VAK E W N+ + K+ YE+ A K K KY +++ A++
Sbjct: 91 LFCSEYRPKIREHPGLSIGDVAKKLEEMWNNIAADGKQSYEKKAAKLKGKYRKDITAFQG 150
Query: 357 R 357
+
Sbjct: 151 K 151
>gi|38018014|gb|AAR08136.1| high mobility group box protein HMGB2 [Suberites domuncula]
Length = 183
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 293 VTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
+TA+ F SE R + N +V ++AK+ G +WK M+E+ K+P+ ++A+ +K++YN+E
Sbjct: 99 LTAFLFFCSEERPKMKEKNPGSSVGDLAKLLGAKWKGMSEDDKQPFSDMAQDDKDRYNDE 158
Query: 351 MEAYKR 356
M +K+
Sbjct: 159 MALWKK 164
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
R ++ +C ++ + K++NP + ++ +LGAKWK +S ++K+P+ + Q +K+ Y
Sbjct: 97 RSLTAFLFFCSEERPKMKEKNPGSSVGDLAKLLGAKWKGMSEDDKQPFSDMAQDDKDRYN 156
Query: 235 QVMA 238
MA
Sbjct: 157 DEMA 160
>gi|344236149|gb|EGV92252.1| Transcription factor A, mitochondrial [Cricetulus griseus]
Length = 190
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 98/186 (52%), Gaps = 21/186 (11%)
Query: 180 YILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAK 239
Y+ + +Q K ++P+A+ ++ + A W+ + EEKK YE ++A+ +AY + ++K
Sbjct: 4 YLRFSTEQLPRFKAKHPDAKLSDLVRKIAAAWRELPEEEKKVYEADFRADWKAYKEALSK 63
Query: 240 ERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL--KPKHPVTAYF 297
+ Q T +L+ + +Q+ K+ KK + L KPK P +AY
Sbjct: 64 FK-------------DQLTPAQLVSFEKEVRQKRLKKKASVKKRELMLLGKPKRPRSAYN 110
Query: 298 LFSSERRAALLADNKNVLEVAKI--TGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
++ SE + K+ ++ E WK+++ ++++ Y ++AK ++ +Y+ EM++++
Sbjct: 111 IYVSES----FQETKDGSAPGRLKTINEAWKSLSSDERQAYIQLAKDDRIRYDNEMKSWE 166
Query: 356 RRMKEL 361
+M E+
Sbjct: 167 EQMAEV 172
>gi|444732719|gb|ELW72994.1| High mobility group protein B1 [Tupaia chinensis]
Length = 289
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SAEEK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT + + K KK KDP PK P +A+F
Sbjct: 72 ---------------EREMKTYIP-------------PKGKTKKKFKDPNSPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + ++ V +V K GE W N ++K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEYRPKIKGEHPGLSVGDVTKKLGEMWNNTAADEKQPYEKKAAKLKEKYKKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++T LG W N +A+EK+PY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSVGDVTKKLGEMWNNTAADEKQPY 144
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++PE+ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K + + K P PK P +A+F
Sbjct: 76 --------------------------KNYVPPKGDKKGKKKDPN------APKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|224065681|ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| high mobility group family [Populus trichocarpa]
Length = 152
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R + NK+V V K G++WK+++ +K PY A
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 342 KNKEKYNEEMEAYKR 356
K K +Y ++M+AY +
Sbjct: 99 KRKVEYEKKMKAYNK 113
>gi|351715817|gb|EHB18736.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 165
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 36/175 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDASINFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT Y+ K E +K K KDP PK P +A+F
Sbjct: 72 ---------------EREMKT-------YIPPKGETEK------KFKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
LF SE + ++ + +VAK GE W N + K+PYE+ A K KEKY +E
Sbjct: 104 LFYSEYCPQIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKE 158
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEE 338
+K+KDP PK ++AY F+++ R + +N + +V K+ GE+WK ++E +RPYE+
Sbjct: 17 RKKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGEKWKALSEADRRPYED 76
Query: 339 IAKKNKEKY 347
A +K++Y
Sbjct: 77 KAAADKKRY 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 164 DRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYE 223
+RKKK KR Y+ + D + ++ENP F ++ +LG KWK +S +++PYE
Sbjct: 16 ERKKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGEKWKALSEADRRPYE 75
Query: 224 EKYQAEKEAY 233
+K A+K+ Y
Sbjct: 76 DKAAADKKRY 85
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD---NKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
DP KPK P +A+F+F E R + NK+V V K G++WK+++ +K PY A
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 342 KNKEKYNEEMEAY 354
K K +Y ++M+AY
Sbjct: 99 KRKVEYEKKMKAY 111
>gi|224091126|ref|XP_002309188.1| predicted protein [Populus trichocarpa]
gi|222855164|gb|EEE92711.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 20 RRALKPKNSLANEAV-VMAQTPSQSPIPNPPDAGLSKENHESLSQPKKAAAKGKAKQATK 78
R+ L+PKNS V P Q I +KENH K +
Sbjct: 20 RKPLQPKNSPVTPMTQVQILKPKQEWIEFSVVKDSNKENH-------PIYTTTPTKSIIE 72
Query: 79 KQDTSFDKDLQEMQEMLEKMKLEKEKTEELLKEKDEMLKMKEEELELQGKEQEKLHMELK 138
D+S ++L +++ LE+++L++E+TE++LKE++ ++ ++ +ELE +G+ Q++L +++
Sbjct: 73 PLDSSLAEELSAIKKKLERLRLDRERTEKMLKEREMVMDLQMKELEQRGEVQKRLEIQVD 132
Query: 139 KLQKMKEFKP-NMTLPIVQCLKDKEQDRKKKGC 170
L ++KE + +M + ++ L++KE ++K G
Sbjct: 133 ILYRLKELQSYSMIISPIRTLREKEHEKKTCGV 165
>gi|71142473|emb|CAH60729.1| transcription factor A [Pongo pygmaeus]
Length = 160
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 192 KKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLE 251
K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y + +++ + + +++
Sbjct: 7 KAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMS 66
Query: 252 EEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHPVTAYFLFSSERRAALLAD 310
E E+ +++L+ K A KKE L KPK P +AY ++ +ER + D
Sbjct: 67 LEK------EITDKHLKRKAMAK------KKELTLLGKPKRPRSAYNVYVAERFQEVQGD 114
Query: 311 NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
+ E K E WKN+++ +K Y + AK+++ +Y+ EM++++ +M
Sbjct: 115 SPQ--EKLKTLKENWKNLSDSEKELYIQYAKEDETRYHNEMKSWEEQM 160
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 38/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++PEA F E + +WK +SA+EK +E+ + +K Y
Sbjct: 18 FVQTCRE---EHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDMARQDKARY---- 70
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E E M + + KK KK KDP PK P +A+F
Sbjct: 71 -----EREMMNYVPA----------------------RGGKKKKKYKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F SE R + ++ + +VAK GE W + E K+PYE+ A K KEKY +++ AY+
Sbjct: 104 IFCSEFRPKVKGESPGLSIGDVAKRLGEMWNSTAAEDKQPYEKKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
>gi|296221849|ref|XP_002756934.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 203
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 36/172 (20%)
Query: 190 EAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKL 249
E KK+ P+A E + +WK +SA+EK +E+ +A+K Y
Sbjct: 27 EHKKQQPDAS--EFSKTCSERWKTMSAKEKGKFEDMAKADKAHY---------------- 68
Query: 250 LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
E + KT Y+ K E K K KD PK P +A+FLF SE R +
Sbjct: 69 ---EREMKT-------YIPPKGETKK------KFKDRNAPKRPPSAFFLFCSEYRPKIKG 112
Query: 310 DNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
++ + +VAK GE W N + K+PYE+ A K KEK +++ AY+ + K
Sbjct: 113 EHPGLSIGDVAKKLGEMWSNTAADDKQPYEKKAAKLKEKCEKDIAAYRAKGK 164
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 93 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWSNTAADDKQPY 141
>gi|430812617|emb|CCJ29965.1| unnamed protein product [Pneumocystis jirovecii]
Length = 294
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRPS P++ +C Q + + EN + ++T LGA W+N+ E +KPY + Y+ EK+ +
Sbjct: 143 KRPSNPFLKFCDVQREKIRSENEGVDRFDVTRALGAAWQNLDDESRKPYYDAYELEKKQF 202
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAME 261
M + ES +LL ++ K ++ E
Sbjct: 203 KIKM--DEYESGNSRLLAQQSKSTSSNE 228
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK P + F +R + ++N+ V +V + G W+N+ +E ++PY + +
Sbjct: 138 DPDAPKRPSNPFLKFCDVQREKIRSENEGVDRFDVTRALGAAWQNLDDESRKPYYDAYEL 197
Query: 343 NKEKYNEEMEAYKRRMKELL 362
K+++ +M+ Y+ LL
Sbjct: 198 EKKQFKIKMDEYESGNSRLL 217
>gi|156846079|ref|XP_001645928.1| hypothetical protein Kpol_1045p57 [Vanderwaltozyma polyspora DSM
70294]
gi|156116598|gb|EDO18070.1| hypothetical protein Kpol_1045p57 [Vanderwaltozyma polyspora DSM
70294]
Length = 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 282 KEKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
K++DP PK P AY LF + + +V K E WKN++EE ++PY ++
Sbjct: 87 KDRDPNLPKRPTNAYLLFCEVNKEKIR--QSGTQDVTKALAEAWKNLSEEDRKPYYKLYS 144
Query: 342 KNKEKYNEEMEAY 354
++E+Y EME Y
Sbjct: 145 DDRERYKREMEIY 157
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 29/146 (19%)
Query: 109 LKEKDEMLKMKEEELELQGKEQEKLHME----LKKLQKMKEFKPNMT----LPIVQCLK- 159
LKE++E+L + + L K +L +E L++L+ E P ++ LP ++ K
Sbjct: 13 LKEENEVLALGIQRTRLSIK---RLKLEYSVLLERLEARLEIDPELSYENPLPTLESFKK 69
Query: 160 -----------DKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKENP-EAEFKEITNIL 207
K Q K + KRP+ Y+L+C E KE ++ +++T L
Sbjct: 70 ELLTKPLKKTKSKSQKAKDRDPNLPKRPTNAYLLFC-----EVNKEKIRQSGTQDVTKAL 124
Query: 208 GAKWKNVSAEEKKPYEEKYQAEKEAY 233
WKN+S E++KPY + Y ++E Y
Sbjct: 125 AEAWKNLSEEDRKPYYKLYSDDRERY 150
>gi|449433698|ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
Length = 161
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN---KNVLEVAKITGEEWKNMTEEQKRPYEEIAK 341
D KPK P TA+F F + R N K + +V K GE+WK MT E+K Y +IA
Sbjct: 69 DVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIAT 128
Query: 342 KNKEKYNEEMEAYKRRM 358
+ + ++++ M YK+RM
Sbjct: 129 EKRAEFDKAMTEYKKRM 145
>gi|50421411|ref|XP_459256.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
gi|74631679|sp|Q6BRB4.1|NHP6_DEBHA RecName: Full=Non-histone chromosomal protein 6
gi|49654923|emb|CAG87430.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
Length = 92
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N + +V K+ GE+WK +T E K PYE A
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTPEDKIPYENKADT 74
Query: 343 NKEKYNEEMEAYKRR 357
+K++Y +E Y ++
Sbjct: 75 DKKRYEKEKAEYAKK 89
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP F ++ +LG KWK ++ E+K PYE K +K+ Y
Sbjct: 20 KRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTPEDKIPYENKADTDKKRY 79
>gi|119367393|sp|Q4H0T5.1|TFAM_PRECR RecName: Full=Transcription factor A, mitochondrial; Short=mtTFA;
Flags: Precursor
gi|71142466|emb|CAH25649.1| mitochondrial transcription factor A [Trachypithecus cristatus]
Length = 246
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 99/187 (52%), Gaps = 13/187 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K ENP+A+ E+ + W+ + +KK Y++ Y+A+ + Y
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAENPDAKPTELIRRIAKLWRELPDSKKKIYQDAYRADWQVY 110
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
+ +++ + + ++ E E+++++L+ K K K+ KPK P
Sbjct: 111 KEKISRFKEQLTPSQITSLEK------EIMDKHLK-----RKAMTKRKELTQLGKPKRPR 159
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+AY ++ +E+ D+ E K E WKN+++ +K Y +AK+++ +Y+ EM++
Sbjct: 160 SAYNVYVAEKFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIRLAKEDEIRYHNEMKS 217
Query: 354 YKRRMKE 360
++ +M E
Sbjct: 218 WEEQMIE 224
>gi|355754606|gb|EHH58507.1| hypothetical protein EGM_08375 [Macaca fascicularis]
Length = 263
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 26 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY-------------- 71
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
E + KT Y+ K E K K KDP PK P +A+FLF SE R +
Sbjct: 72 -----EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFFLFCSEYRPKI 113
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
++ + +VAK GE W N + K+PY
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
>gi|354484377|ref|XP_003504365.1| PREDICTED: high mobility group protein B2-like [Cricetulus griseus]
Length = 264
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+ A K KEK
Sbjct: 149 PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEK 208
Query: 347 YNEEMEAYKRRMK 359
Y +++ AY+ + K
Sbjct: 209 YEKDIAAYRAKGK 221
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 150 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 209
Query: 234 LQVMAKER--RESEAMK 248
+ +A R +SEA K
Sbjct: 210 EKDIAAYRAKGKSEAGK 226
>gi|109089744|ref|XP_001097656.1| PREDICTED: transcription factor A, mitochondrial isoform 2 [Macaca
mulatta]
gi|355562588|gb|EHH19182.1| hypothetical protein EGK_19843 [Macaca mulatta]
gi|355782915|gb|EHH64836.1| hypothetical protein EGM_18157 [Macaca fascicularis]
Length = 248
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 100/193 (51%), Gaps = 23/193 (11%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K Q + +NP+A+ E+ + W+ + EKK Y + Y+AE E Y
Sbjct: 51 KKPVSSYLRFSKQQLPIYRAQNPDAKTTELVRRIAKHWRELPDSEKKIYRDAYKAEWEVY 110
Query: 234 LQVMA--KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL---K 288
+ ++ KE+ + + LE+ E+L++ L+ K K K+ + K
Sbjct: 111 KEKISKFKEQLTPDEITSLEK--------EILDKRLK--------RKAVTKRKELIQLGK 154
Query: 289 PKHPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYN 348
PK P +AY ++ +ER A ++ E K E WKN+++ +K Y + AK+++ +Y+
Sbjct: 155 PKRPRSAYNVYVAERFQE--AKGESPQEKLKTVKENWKNLSDSEKELYIQHAKEDEIRYH 212
Query: 349 EEMEAYKRRMKEL 361
EM++++ M E+
Sbjct: 213 NEMKSWEEHMIEI 225
>gi|148684659|gb|EDL16606.1| mCG50402 [Mus musculus]
Length = 214
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 14 YAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY---- 69
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ K KT + + ++ KK KDP PK P +A+F
Sbjct: 70 ---------------KRKIKTYIPPPKGEIK------------KKFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF S + ++ + + +VAK GE W N + K+PYE+ A K KEKY +++ AY+
Sbjct: 103 LFYSVYYPKIKGEHPDLSIGDVAKKLGEMWNNAAADDKQPYEKKAAKLKEKYEKDIAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 AKGK 166
>gi|403342690|gb|EJY70668.1| High mobility group protein 1.2 [Oxytricha trifallax]
Length = 751
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 173 RKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEA 232
++RP + L+ + N K E ++ LG++WK ++ EEK+ Y + EKE
Sbjct: 174 KRRPLSAFFLYVR--LNRNKPEYTNMPRNQLCQKLGSEWKELNDEEKQHYNDLAHQEKER 231
Query: 233 YLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQ---FKQEADKENKKPKKEKDPLKP 289
Y + M KE +A LL E+ Q ++ +L+++ Q F E+ +N + K ++
Sbjct: 232 YEREM-KEVVAQQAKTLLLHENPQFSSNDLMDEENQKQIFGSESKSQNSSNEMIKSSVES 290
Query: 290 KH-------------------------------------------------PVTAYFLFS 300
H P +++ L+S
Sbjct: 291 NHSQDNLAIQSNQQETRENTLKEQSLDQKQLNLESLNDSQGKTVVGMSVKRPRSSFLLYS 350
Query: 301 SERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM-EAYKRR 357
+RR L + +E+AK+ EWK + +E+K+ Y ++A + KE+Y EM E ++
Sbjct: 351 LDRRKQLQQMHPGLGFIELAKMFANEWKGLNDEEKQHYNDLAHQEKERYEREMKEVVAQQ 410
Query: 358 MKELL 362
KEL+
Sbjct: 411 AKELM 415
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 198 AEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEA-MKLLEEEHKQ 256
EFK ++ K+ +V+ +K+ YE+ E E + Q + +E ++ + + + Q
Sbjct: 89 GEFKVLSEEEKQKYADVAITDKQRYEK----EMEEFRQKINQESLNQDSRISGIRKSKIQ 144
Query: 257 KTAMELLEQYLQFKQEADKENKKPKKEKDPLKPK-HPVTAYFLFSSERRAALLADNKNVL 315
K E+ LQ K + +++ + +K + KPK P++A+FL+ R N
Sbjct: 145 KQDQEI----LQTKSKRLRKSLEDQKSQVVPKPKRRPLSAFFLYVRLNRNKPEYTNMPRN 200
Query: 316 EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEM-EAYKRRMKELLV 363
++ + G EWK + +E+K+ Y ++A + KE+Y EM E ++ K LL+
Sbjct: 201 QLCQKLGSEWKELNDEEKQHYNDLAHQEKERYEREMKEVVAQQAKTLLL 249
>gi|346472777|gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 288 KPKHPVTAYFLFSSERRAA---LLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNK 344
KPK TA+FLF + R L DNK+V VAK GE W++MT E+K+PY + A + K
Sbjct: 103 KPKRAPTAFFLFMDDFRKEYKELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAELK 162
Query: 345 EKYNEEME 352
+Y +E+E
Sbjct: 163 AEYVKEIE 170
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + ++N ++ +V K GE+WK +T E+K PYE A+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKLPYEAKAQA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E E Y
Sbjct: 77 DKKRYESEKELY 88
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP+ F ++ LG KWK ++ EEK PYE K QA+K+ Y
Sbjct: 22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKLPYEAKAQADKKRY 81
>gi|366998295|ref|XP_003683884.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
gi|357522179|emb|CCE61450.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N +V +V +I GE+WK +T E+K P+E A+
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVSFGQVGRILGEKWKALTAEEKIPFEAKAEA 76
Query: 343 NKEKYNEEMEAY 354
+K++Y E Y
Sbjct: 77 DKKRYESEKALY 88
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + K ENP+ F ++ ILG KWK ++AEEK P+E K +A+K+ Y
Sbjct: 22 KRALSAYMFFANETRDIVKAENPDVSFGQVGRILGEKWKALTAEEKIPFEAKAEADKKRY 81
>gi|355693103|gb|EHH27706.1| hypothetical protein EGK_17974, partial [Macaca mulatta]
Length = 621
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 284 KDPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAK 341
KDP KP+ PV+AY LF + +AA+ N N EV+KI W ++ EEQK+ Y+ +
Sbjct: 218 KDPNKPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTE 277
Query: 342 KNKEKYNEEMEAYK 355
K++Y + + AYK
Sbjct: 278 AAKKEYLKALAAYK 291
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
++P Y L+ +D K +NP A F E++ I+ + W ++ E+K+ Y+ K +A K+ Y
Sbjct: 224 QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEY 283
Query: 234 LQVMA--KERRESEA 246
L+ +A K+ +E +A
Sbjct: 284 LKALAAYKDNQECQA 298
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+ A K KEK
Sbjct: 119 PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEK 178
Query: 347 YNEEMEAYKRRMK 359
Y +++ AY+ + K
Sbjct: 179 YEKDIAAYRAKGK 191
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 120 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 179
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 180 EKDIAAYR 187
>gi|409075359|gb|EKM75740.1| hypothetical protein AGABI1DRAFT_116212 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198009|gb|EKV47935.1| hypothetical protein AGABI2DRAFT_191645 [Agaricus bisporus var.
bisporus H97]
Length = 262
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 247 MKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAA 306
++ L HK+K + L + EA K+ K+ K KDP PK P ++Y LF +E R
Sbjct: 45 IRALSNTHKRKADVALDDD------EAPKKRKRNAKPKDPNAPKRPASSYILFQNEIRKQ 98
Query: 307 LLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMKE 360
L + + E+ + + WK M+E++K Y ++ + KE+Y+++ +AY R E
Sbjct: 99 LKDQHPELTNAELLNMISDIWKKMSEDEKATYHKLVEDAKERYSQDKKAYDSRTPE 154
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 136 ELKKLQKMKEFKPNMTLPIVQCLKDKEQDRKKKGCAERKRPSPPYILWCKDQWNEAKKEN 195
+++ L + K ++ L + K ++++ K K KRP+ YIL+ + + K ++
Sbjct: 44 DIRALSNTHKRKADVALDDDEAPKKRKRNAKPKDPNAPKRPASSYILFQNEIRKQLKDQH 103
Query: 196 PEAEFKEITNILGAKWKNVSAEEKKPYE-------EKYQAEKEAY 233
PE E+ N++ WK +S +EK Y E+Y +K+AY
Sbjct: 104 PELTNAELLNMISDIWKKMSEDEKATYHKLVEDAKERYSQDKKAY 148
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + K K+KDP PK P +A+F
Sbjct: 76 --------------------------------KNYVPPKGNKKGKKKDPNAPKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|449509245|ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 303
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++ + FS R + N + E+ ++ G++W M+ E+K PYE A+
Sbjct: 215 DPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARD 274
Query: 343 NKEKYNEEMEAYK 355
+K++Y EE+ YK
Sbjct: 275 DKKRYKEEISGYK 287
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR ++ + K + KK NP F E+ +LG KW +SAEEK+PYE K + +K+ Y
Sbjct: 220 KRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRY 279
>gi|410044942|ref|XP_001169551.3| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 269
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLAD--NKNVLEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P +A+FL+ SE + + ++ + AK GE W N + K+PYE+
Sbjct: 114 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSIGDAAKKLGEMWNNTAADDKQPYEK 173
Query: 339 IAKKNKEKYNEEMEAYKRRMKE 360
+ K KEKY +++ AY+ + K
Sbjct: 174 RSAKLKEKYEKDIAAYRAKGKH 195
>gi|355700906|gb|EHH28927.1| hypothetical protein EGK_09214, partial [Macaca mulatta]
Length = 263
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++P+A F E + +WK +SA+EK +E+ +A+K Y
Sbjct: 26 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY-------------- 71
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
E + KT Y+ K E K K KDP PK P +A+FLF SE R +
Sbjct: 72 -----EREMKT-------YIPPKGETKK------KFKDPNAPKRPPSAFFLFCSEYRPKI 113
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPY 336
++ + +VAK GE W N + K+PY
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
>gi|195025405|ref|XP_001986052.1| GH21151 [Drosophila grimshawi]
gi|193902052|gb|EDW00919.1| GH21151 [Drosophila grimshawi]
Length = 744
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 280 PKKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYE 337
P K+KD KPK P TA+ L+ ++ R + DN V E+AK GE WK + ++ K ++
Sbjct: 551 PTKKKDSNKPKRPTTAFMLWLNDTREQIKRDNPGIKVTEIAKKGGEMWKELKDKSK--WD 608
Query: 338 EIAKKNKEKYNEEMEAYK 355
E A K+K++Y +EM YK
Sbjct: 609 EAASKDKQRYQDEMRNYK 626
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K K KK PK P +A+F
Sbjct: 76 --------------------------KNYVPPKGGDKKGKKKDPNA-----PKRPPSAFF 104
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 105 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 164
Query: 356 RRMK 359
+ K
Sbjct: 165 AKGK 168
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 97 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 156
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 157 EKDIAAYR 164
>gi|402889604|ref|XP_003908101.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 198
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 37/184 (20%)
Query: 180 YILWCKDQWNEAKKENPEA--EFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E +K+NP+A +F E WK + A+E+ +E+ +A+K Y
Sbjct: 16 YAFFVQTCQEEHEKKNPDASVDFSEFVKKCLEMWKTIFAKERGKFEDMAKADKAGY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
E + KT + + KK KDP P+ P A+F
Sbjct: 72 ---------------EREMKTCIP--------------PKGEKKKFKDPSAPRRPPLAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
+F S+ R + ++ + +V K E W N K+ Y+++A K KEKY +++ AY+
Sbjct: 103 VFCSKNRPKIKGEHPGLSIDDVVKKLAEMWNNTAVADKQFYKKVAAKLKEKYKKDIAAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 TKGK 166
>gi|344235655|gb|EGV91758.1| High mobility group protein B2 [Cricetulus griseus]
Length = 159
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+ A K KEK
Sbjct: 44 PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEK 103
Query: 347 YNEEMEAYKRRMK 359
Y +++ AY+ + K
Sbjct: 104 YEKDIAAYRAKGK 116
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 45 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 104
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 105 EKDIAAYR 112
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 19 FVQMCRE---EHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|20138433|sp|Q9UGV6.1|HMGLX_HUMAN RecName: Full=Putative high mobility group protein 1-like 10;
Short=HMG-1L10
Length = 211
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 36/172 (20%)
Query: 192 KKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKL 249
KK++P+A E + +WK +SA+EK +E+ +A+K Y ER
Sbjct: 28 KKKHPDASVNLSEFSKKCSERWKTMSAKEKGKFEDMAKADKAHY------ERE------- 74
Query: 250 LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLA 309
++ Y+ K E KK KDP PK +A+FLF S R +
Sbjct: 75 -------------MKTYIPPKGETK------KKFKDPNAPKRTPSAFFLFCSAYRPKIKG 115
Query: 310 DNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
++ + +VAK GE W N + K+PYE+ A K KEKY +++ AY+ + K
Sbjct: 116 EHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 167
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|403295709|ref|XP_003938773.1| PREDICTED: high mobility group protein B2 [Saimiri boliviensis
boliviensis]
Length = 158
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+ A K KEK
Sbjct: 44 PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEK 103
Query: 347 YNEEMEAYKRRMK 359
Y +++ AY+ + K
Sbjct: 104 YEKDIAAYRAKGK 116
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 45 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 104
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 105 EKDIAAYR 112
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALL----ADNKNVLEVAKITGEEWKNMTEEQKRPY 336
+ +KDP PK P+++Y F+ ++RA +L + ++ +V K+ GEEW ++ QK Y
Sbjct: 570 RAKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTY 629
Query: 337 EEIAKKNKEKYNEEMEAY 354
++ A++ K +Y EM Y
Sbjct: 630 QKKAEQEKIRYQREMSLY 647
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K + + K P PK P +A+F
Sbjct: 76 --------------------------KNYVPPKGDKKGKKKDPNA------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|149236976|ref|XP_001524365.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451900|gb|EDK46156.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 93
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N + +V K+ GE+WK + E K PYE A+
Sbjct: 16 DPDAPKRSLSAYMFFANENRDIVRAENPGITFGQVGKLLGEKWKALGSEDKVPYENKAEA 75
Query: 343 NKEKYNEEMEAYKRR 357
+K++Y +E Y ++
Sbjct: 76 DKKRYEKEKAEYAKK 90
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP F ++ +LG KWK + +E+K PYE K +A+K+ Y
Sbjct: 21 KRSLSAYMFFANENRDIVRAENPGITFGQVGKLLGEKWKALGSEDKVPYENKAEADKKRY 80
>gi|297297620|ref|XP_001106417.2| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 210
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++PE+ F E + +WK +SA+EK +E +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEGMAKSDKVCYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K + + K P PK P +A+F
Sbjct: 76 --------------------------KNYVPPKGDKKGKKKDPN------APKRPPSAFF 103
Query: 298 LFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSTGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYQKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSTGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 QKDIAAYR 163
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AYF F +++RA ++ N + V EV K GE W+ M++ +K PY + A
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMKVTEVGKKLGELWRAMSDSEKVPYNKKADA 79
Query: 343 NKEKYNEEMEAYK 355
+K +Y + AYK
Sbjct: 80 DKVRYEKAKAAYK 92
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 286 PLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKKN 343
P PK ++AY F++E+R + +N + +V K+ GE WK ++++Q+ PYEE A +
Sbjct: 22 PNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAAD 81
Query: 344 KEKYNEEMEAY 354
K++Y +E +Y
Sbjct: 82 KKRYEDEKASY 92
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + +Q ++ENP F ++ +LG +WK +S +++ PYEEK A+K+ Y
Sbjct: 26 KRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAADKKRY 85
>gi|294901568|ref|XP_002777418.1| high mobility group protein, putative [Perkinsus marinus ATCC
50983]
gi|239885050|gb|EER09234.1| high mobility group protein, putative [Perkinsus marinus ATCC
50983]
Length = 103
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 290 KHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
K ++AYF+F + R ++ +N K++ E+AK TGE WK M+E +K PY ++A ++K+
Sbjct: 33 KRALSAYFIFMQKNRQKIMEENGLQPKDIGEIAKKTGEMWKGMSEAEKAPYNKMADEDKQ 92
Query: 346 KYNEE 350
+Y E
Sbjct: 93 RYERE 97
>gi|397631195|gb|EJK70063.1| hypothetical protein THAOC_08612 [Thalassiosira oceanica]
Length = 827
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 163 QDRKKKGCAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
Q +KK+ K P Y+ + + +E K+ NP+A F +I+ +LG +K +S EK+PY
Sbjct: 589 QKKKKRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPY 648
Query: 223 EEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKK 282
+E + +K Y +RE E ++ + K+ K +
Sbjct: 649 DEMARKDKARY-------KREMEDYDPPSDDSDDDADD---------GKAKSKKPAKKRA 692
Query: 283 EKDPLKPKHPVTAYFLFSSERRAALLADNKNVLEVAKIT------------GEEWKNMTE 330
+KDP PK P+ A+ L+S+ R + +N + ++V IT G +++ + E
Sbjct: 693 KKDPNAPKKPMNAFMLYSNSIRQKIKEENPD-MKVGDITYADPFFLQSKECGIKYRALNE 751
Query: 331 EQKRPYEEIAKKNKEKYNEEMEAYKR 356
E+K+ + A KEKY E Y++
Sbjct: 752 EEKKKWTAKADAAKEKYKVEFAQYEK 777
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 289 PKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEK 346
PK P +A+FLF SE R + +++ + + AK GE W + + K+PYE+ A K KEK
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEK 154
Query: 347 YNEEMEAYKRRMK 359
Y +++ AY+ + K
Sbjct: 155 YEKDIAAYRAKGK 167
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|444705868|gb|ELW47253.1| High mobility group protein B1 [Tupaia chinensis]
Length = 182
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 36/174 (20%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++P+A F E + +WK +SA++K +E++ + +K Y + M
Sbjct: 14 EHKKKHPDASVNFSEFSKKGSERWKTMSAKQKGKFEDRAKVDKARYEREM---------- 63
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+ Y+ K E KK KDP PK P +A+FLF E L
Sbjct: 64 ----------------KTYIPPKGETK------KKFKDPNAPKRPPSAFFLFCPEYHPKL 101
Query: 308 LADNKNVL--EVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+ ++ +VAK GE W N + K+PYE+ A K KEKY E++ AY+ + K
Sbjct: 102 KEGHPGLIIGDVAKKLGEMWGNAAADGKQPYEKKAAKLKEKYKEDIAAYRAKGK 155
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|449459450|ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
Length = 642
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++ + FS R + N + E+ ++ G++W M+ E+K PYE A+
Sbjct: 554 DPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARD 613
Query: 343 NKEKYNEEMEAYK 355
+K++Y EE+ YK
Sbjct: 614 DKKRYKEEISGYK 626
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR ++ + K + KK NP F E+ +LG KW +SAEEK+PYE K + +K+ Y
Sbjct: 559 KRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRY 618
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP KPK P +AYFL+ +E R + A+N V ++AK+ G+ WK +T++ + +E +A K
Sbjct: 546 DPNKPKRPQSAYFLWLNEMREEIKAENPDAGVTDIAKLAGQRWKEVTDKTR--WEGLAVK 603
Query: 343 NKEKYNEEMEAY 354
KE Y + ME Y
Sbjct: 604 AKESYEKAMEEY 615
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y LW + E K ENP+A +I + G +WK V+ +K +E KE+Y
Sbjct: 551 KRPQSAYFLWLNEMREEIKAENPDAGVTDIAKLAGQRWKEVT--DKTRWEGLAVKAKESY 608
Query: 234 LQVM 237
+ M
Sbjct: 609 EKAM 612
>gi|67983563|ref|XP_669154.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56482946|emb|CAH96342.1| hypothetical protein PB000724.01.0 [Plasmodium berghei]
Length = 108
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADN----KNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DPL PK ++AY + ++R ++ + K V +V K+ GE W +T QK PYE+ A
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 341 KKNKEKYNEEM 351
+ +K +Y++E+
Sbjct: 80 ELDKVRYSKEI 90
>gi|237842875|ref|XP_002370735.1| high mobility group protein, putative [Toxoplasma gondii ME49]
gi|211968399|gb|EEB03595.1| high mobility group protein, putative [Toxoplasma gondii ME49]
Length = 644
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALL----ADNKNVLEVAKITGEEWKNMTEEQKRPY 336
+ +KDP PK P+++Y F+ ++RA +L ++ +V K+ GEEW ++ QK Y
Sbjct: 563 RAKKDPNAPKKPLSSYMFFAKDKRAEILKKQPTLKSDIGKVGKMIGEEWAKLSSSQKMTY 622
Query: 337 EEIAKKNKEKYNEEMEAY 354
++ A++ K +Y EM Y
Sbjct: 623 QKKAEQEKIRYQREMSLY 640
>gi|74638955|sp|Q9UVL1.1|NHP6_CANAL RecName: Full=Non-histone chromosomal protein 6
gi|6273391|gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans]
gi|238881668|gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 92
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N + +V K+ GE+WK + E K PYE A+
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEA 74
Query: 343 NKEKYNEEMEAYKRR 357
+K++Y +E Y ++
Sbjct: 75 DKKRYEKEKAEYAKK 89
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP F ++ +LG KWK +++E+K PYE K +A+K+ Y
Sbjct: 20 KRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRY 79
>gi|350590345|ref|XP_003131515.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator chromatin subfamily E member 1-like [Sus
scrofa]
Length = 176
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 179 PYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM- 237
PY+ + + W++ K NP+ + EI I+G W++++ EEK+ Y +Y+AEK Y + M
Sbjct: 54 PYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMK 113
Query: 238 ---------AKERRESEAMKLLEEEHKQKTA-MELLEQYLQFKQEADKENKK 279
A +S A LEEE +Q+ + ME E Y+ + D + KK
Sbjct: 114 AYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDGKK 165
>gi|356624619|pdb|3TMM|A Chain A, Tfam Imposes A U-Turn On Mitochondrial Dna
Length = 238
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 19/184 (10%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
K+P Y+ + K+Q K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y
Sbjct: 43 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVY 102
Query: 234 LQVMA--KERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPK 290
+ ++ KE+ + LE+ E+ +++L+ K KKE L KPK
Sbjct: 103 KEEISRFKEQLTPSQIXSLEK--------EIXDKHLKRKAXTK------KKELTLLGKPK 148
Query: 291 HPVTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEE 350
P +AY ++ +ER D+ E K E WKN+++ +K Y + AK+++ +Y+ E
Sbjct: 149 RPRSAYNVYVAERFQEAKGDSPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNE 206
Query: 351 MEAY 354
+++
Sbjct: 207 XKSW 210
>gi|790198|gb|AAC41606.1| high mobility group protein [Plasmodium falciparum]
Length = 97
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLAD----NKNVLEVAKITGEEWKNMTEEQKRPYEEIA 340
DP PK ++AY F+ E+RA +++ +K+V V K+ GE W + E++K P+E+ A
Sbjct: 17 DPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEKKA 76
Query: 341 KKNKEKYNEEMEAY 354
+++K +Y +E Y
Sbjct: 77 QEDKLRYEKEKAEY 90
>gi|241954210|ref|XP_002419826.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
gi|223643167|emb|CAX42041.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
Length = 92
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++AY F++E R + A+N + +V K+ GE+WK + E K PYE A+
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEA 74
Query: 343 NKEKYNEEMEAYKRR 357
+K++Y +E Y ++
Sbjct: 75 DKKRYEKEKAEYAKK 89
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR Y+ + + + + ENP F ++ +LG KWK +++E+K PYE K +A+K+ Y
Sbjct: 20 KRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRY 79
>gi|242025658|ref|XP_002433241.1| glutamic acid-rich protein precursor, putative [Pediculus humanus
corporis]
gi|212518782|gb|EEB20503.1| glutamic acid-rich protein precursor, putative [Pediculus humanus
corporis]
Length = 817
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 35/188 (18%)
Query: 175 RPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYL 234
RP Y+L+ +Q ++ KENP E +++ I+ +KN+S EE+ Y +
Sbjct: 343 RPLSTYMLYYLEQKDKVVKENPGMEMTQVSKIISEMYKNLSQEERDKYTD---------- 392
Query: 235 QVMAKERRESEAMKLLE--EEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHP 292
+A ++R++ +KL E EH + A + ++ +Q K+ + K P+K +P K
Sbjct: 393 --LAAKQRQNFDVKLSEFYREHPE-IAQQQQQRKIQGKESS---TKGPRKASNPFK---- 442
Query: 293 VTAYFLFSSER----RAALLA-DNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKY 347
LF E+ A D K V E AK E+WKNM++E+K + + A ++ ++Y
Sbjct: 443 -----LFFQEQLKKHEGGFSAEDRKTVEETAK---EKWKNMSDEKKLIWIDWALQDHKRY 494
Query: 348 NEEMEAYK 355
+EM Y+
Sbjct: 495 EDEMRVYR 502
>gi|157136745|ref|XP_001663824.1| mitochondrial transcription factor A, putative [Aedes aegypti]
gi|108869859|gb|EAT34084.1| AAEL013643-PA [Aedes aegypti]
Length = 255
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP YI + + +NP+A +I+ + A+W+ + K E++Y+ E+ +
Sbjct: 54 KRPVNAYIRFLQSVRPSLLAKNPKASPTDISKLAAAQWQVLDPASKSKLEDEYKKEQTVW 113
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
LQ AK + L ++ KQ E + +++A +E KK KE +PK P+
Sbjct: 114 LQKNAK------YLSQLTDQQKQDIRQARTE---KTEEKAKREYKKKVKELG--RPKRPL 162
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+ L+ ++++ L+ +N L++ K+ ++W ++E K PY A + KY E+++
Sbjct: 163 NGFLLYCADKKPKNLSKEENKLQL-KLMAQKWAALSEMDKAPYNTRAAEALVKYREDIKN 221
Query: 354 YKRRM 358
++ +M
Sbjct: 222 WEDQM 226
>gi|426392256|ref|XP_004062472.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Gorilla gorilla gorilla]
Length = 198
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 36/174 (20%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E K++P+A F E + +WK + A+EK +E+ +A+K Y ER+
Sbjct: 13 EEHKKHPDASVNFSEFSKKCSERWKTMPAKEKGKFEDMAKADKTHY------ERQ----- 61
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
++ Y+ K E KK KDP PK P +A+FLF SE +
Sbjct: 62 ---------------MKTYIPPKGETK------KKFKDPSAPKRPPSAFFLFCSEYHPKI 100
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
++ + +V K GE W + + K+PYE+ A K KEKY +++ AY+ + K
Sbjct: 101 KGEHPGLSIGDVVKKLGEMWNDTAADDKQPYEKKAAKLKEKYEKDIAAYQAKGK 154
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 36/180 (20%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY---- 71
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ E K + ++ + A PK P +A+F
Sbjct: 72 -------------DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|410930380|ref|XP_003978576.1| PREDICTED: transcription factor A, mitochondrial-like [Takifugu
rubripes]
Length = 279
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP Y+ + Q K+ P+ + +I + +W+ +S E+K+P+EE +E +
Sbjct: 53 KRPLNGYMRYVLQQQPMVSKQFPDTKTVDIMRKIAQQWRMLSPEQKQPFEEASLQAREQF 112
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHP 292
+V + RE +L + +Q++A + L+ A ++ + K+E L KPK P
Sbjct: 113 -KVDLQHYRE----QLTPAQLQQQSAEKRLKM-------AQRKASRKKRELTSLGKPKRP 160
Query: 293 VTAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEME 352
+ + +F SE A A + K E+WKN+ QK+ Y+++A+ +K +Y E++
Sbjct: 161 RSPFNIFMSENFAE--ARGSSTQGKMKSLLEDWKNLLGHQKQAYKQLAEDDKIRYKNEIK 218
Query: 353 AYKRRMKEL 361
+++ M E+
Sbjct: 219 SWEEHMLEI 227
>gi|403332939|gb|EJY65527.1| hypothetical protein OXYTRI_14318 [Oxytricha trifallax]
Length = 772
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 288 KPKHPVTAYFLFSSERRAALLA--DNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKE 345
KPK P++AY FS E R + A V++V K W N+++EQK P+E++A ++K+
Sbjct: 325 KPKKPLSAYIYFSQEFREIIRARYPTMTVIQVMKAVSYRWGNLSKEQKYPFEQMAVEDKQ 384
Query: 346 KYNEEMEAYKR 356
+Y++E+ K+
Sbjct: 385 RYDKEINDCKK 395
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 48/208 (23%)
Query: 156 QCLKDKE-----QDRKKKG--CAERKRPSPPYILWCKDQWNEAKKENPEAEFKEITNILG 208
Q + DKE Q K++G K+ + YI++ K++ E NP A+ E+ +
Sbjct: 47 QTITDKEFYKAMQKLKERGTNAVPPKKSASAYIIFGKEKRAEILSRNPTAKVTEVVKEIA 106
Query: 209 AKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQ 268
W +S E+K+ Y++ + +KE Y KE R E+ E+ K
Sbjct: 107 QSWGILSKEDKQKYKDAAKKDKERY----DKELRSLES---FSEKLK------------- 146
Query: 269 FKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAALLADN--KNVLEVAKITGEEWK 326
KPK ++AY +F E R ++ ++ L+V + G++W+
Sbjct: 147 -------------------KPKKCLSAYMIFVKETRPLIVDEHPEMGALQVMQEVGKQWQ 187
Query: 327 NMTEEQKRPYEEIAKKNKEKYNEEMEAY 354
+TEEQK ++E A ++K +Y E A+
Sbjct: 188 ALTEEQKNYFKEKADRDKLRYLNEQRAF 215
>gi|355687725|gb|EHH26309.1| hypothetical protein EGK_16239 [Macaca mulatta]
Length = 209
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++PE+ F E + +WK +SA+EK +E +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEGMAKSDKVRYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K + + K P PK P +A+F
Sbjct: 76 --------------------------KNYVPPKGDKKGKKKDPN------APKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 16 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREM 75
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
+ Y+ K + + K P PK P +A+F
Sbjct: 76 --------------------------KNYVPPKGDKKGKKKDPNA------PKRPPSAFF 103
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 104 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEHSVKDKQPYEQKAAKLKEKYEKDIAAYR 163
Query: 356 RRMK 359
+ K
Sbjct: 164 AKGK 167
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W S ++K+PYE+K KE Y
Sbjct: 96 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEHSVKDKQPYEQKAAKLKEKY 155
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 156 EKDIAAYR 163
>gi|344252855|gb|EGW08959.1| TRAF family member-associated NF-kappa-B activator [Cricetulus
griseus]
Length = 427
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEE 338
KK KDP PK P +A+FLF SE R ++ + +VAK GE W N + K+PYE+
Sbjct: 300 KKFKDPNAPKRPPSAFFLFCSEYRPKFKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 359
Query: 339 IAKKNKEKYNEEMEAYKRRMK 359
A K KEK+ +++ AY+ + K
Sbjct: 360 KAAKLKEKHEKDIAAYRAKGK 380
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C + + K E+P ++ LG W N +A++K+PY
Sbjct: 309 KRPPSAFFLFCSEYRPKFKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 357
>gi|147866286|emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++ + FS R + + EV ++ G++WK MT E+K PYE A+
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQA 614
Query: 343 NKEKYNEEMEAYK 355
+K++Y +E+ YK
Sbjct: 615 DKKRYRDEISGYK 627
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR ++ + + + KK P F E+ +LG KWK ++AEEK+PYE K QA+K+ Y
Sbjct: 560 KRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRY 619
>gi|225452706|ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAALLADNKNV--LEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK ++ + FS R + + EV ++ G++WK MT E+K PYE A+
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQA 614
Query: 343 NKEKYNEEMEAYK 355
+K++Y +E+ YK
Sbjct: 615 DKKRYRDEISGYK 627
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KR ++ + + + KK P F E+ +LG KWK ++AEEK+PYE K QA+K+ Y
Sbjct: 560 KRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRY 619
>gi|295913196|gb|ADG57857.1| transcription factor [Lycoris longituba]
Length = 143
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 281 KKEKDPLKPKHPVTAYFLFSSERRAAL---LADNKNVLEVAKITGEEWKNMTEEQKRPYE 337
K KDP KPK P +A+F+F R NK++ V K GE WK+M++ +K P+
Sbjct: 25 KAGKDPNKPKRPPSAFFVFMEGFRKEFKDKNPKNKSIAAVGKAGGERWKSMSDSEKAPFV 84
Query: 338 EIAKKNKEKYNEEMEAYKR 356
A+K K +Y ++M A+ +
Sbjct: 85 SKAEKLKAEYGKKMNAHNK 103
>gi|71142475|emb|CAH60730.1| transcription factor A [Hylobates lar]
Length = 160
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 192 KKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRE---SEAMK 248
K +NP+A+ E+ + W+ + EKK Y E Y+A+ E Y + +++ + + SE
Sbjct: 7 KAQNPDAKTTELVRRIAKHWRELPDSEKKVYREAYKADWEVYKEEISRFKEQLTPSEITS 66
Query: 249 L---LEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRA 305
L + +E ++ A+ ++++Q KPK P +AY ++ +ER
Sbjct: 67 LEKEILDERLKRKAVTKRKEFIQLG-----------------KPKRPRSAYNVYVAERFQ 109
Query: 306 ALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
D+ E K E WKN+++ +K Y ++AK+++ +Y+ EM++++ +M
Sbjct: 110 EAEGDSPQ--EKLKTVKENWKNLSDSEKEIYIQLAKEDEIRYHNEMKSWEEQM 160
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 36/174 (20%)
Query: 190 EAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAM 247
E KK++P++ F E + +WK +SA+EK +E+ +++K Y
Sbjct: 100 EHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARY-------------- 145
Query: 248 KLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYFLFSSERRAAL 307
+ E K + ++ + A PK P +A+FLF SE R +
Sbjct: 146 ---DREMKNYVPPKGDKKGKKKDPNA---------------PKRPPSAFFLFCSEHRPKI 187
Query: 308 LADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRMK 359
+++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+ + K
Sbjct: 188 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGK 241
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 170 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 229
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 230 EKDIAAYR 237
>gi|323450291|gb|EGB06173.1| hypothetical protein AURANDRAFT_72060 [Aureococcus anophagefferens]
Length = 667
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 285 DPLKPKHPVTAYFLFSSERRAAL--LADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKK 342
DP PK +AY +F + +RA + + ++ ++ + G+ WK +T++ K+PY ++A
Sbjct: 578 DPNAPKGKSSAYIMFGNAKRAEVKEQHPDFSLGDIGRELGKRWKELTDDDKKPYVDLATA 637
Query: 343 NKEKYNEEMEAYK 355
+ E+Y+ EM AYK
Sbjct: 638 DAERYDREMAAYK 650
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 177 SPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQV 236
S YI++ + E K+++P+ +I LG +WK ++ ++KKPY + A+ E Y +
Sbjct: 586 SSAYIMFGNAKRAEVKEQHPDFSLGDIGRELGKRWKELTDDDKKPYVDLATADAERYDRE 645
Query: 237 MA 238
MA
Sbjct: 646 MA 647
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 39/184 (21%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
++ C++ E KK++P+A F E + +WK +S +EK +E+ + +K Y + M
Sbjct: 18 FVQTCRE---EHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMAKQDKVRYEREM 74
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + +K K+ KDP PK P +A+F
Sbjct: 75 --------------------------------KNYVPPKGQKKKRFKDPNAPKRPPSAFF 102
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF ++ R + +++ + + AK GE W + + E+K+PYE+ A K KEKY++++ AY+
Sbjct: 103 LFCADFRPKIKSESPGLSIGDTAKKLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYR 162
Query: 356 RRMK 359
+ K
Sbjct: 163 TKGK 166
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPY 222
KRP + L+C D + K E+P + LG W + SAEEK+PY
Sbjct: 95 KRPPSAFFLFCADFRPKIKSESPGLSIGDTAKKLGEMWNSSSAEEKQPY 143
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 36/184 (19%)
Query: 180 YILWCKDQWNEAKKENPEAE--FKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVM 237
Y + + E KK++P++ F E + +WK +SA+EK +E+ +++K Y + M
Sbjct: 4 YAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYDREM 63
Query: 238 AKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPVTAYF 297
K + K K+KDP PK P +A+F
Sbjct: 64 --------------------------------KNYVPPKGDKKGKKKDPNAPKRPPSAFF 91
Query: 298 LFSSERRAALLADNKN--VLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYK 355
LF SE R + +++ + + AK GE W + + K+PYE+ A K KEKY +++ AY+
Sbjct: 92 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 151
Query: 356 RRMK 359
+ K
Sbjct: 152 AKGK 155
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP + L+C + + K E+P + LG W SA++K+PYE+K KE Y
Sbjct: 84 KRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKY 143
Query: 234 LQVMAKER 241
+ +A R
Sbjct: 144 EKDIAAYR 151
>gi|157107110|ref|XP_001649627.1| mitochondrial transcription factor A, putative [Aedes aegypti]
gi|157107112|ref|XP_001649628.1| mitochondrial transcription factor A, putative [Aedes aegypti]
gi|108868738|gb|EAT32963.1| AAEL014794-PA [Aedes aegypti]
gi|108868739|gb|EAT32964.1| AAEL014794-PB [Aedes aegypti]
Length = 255
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 174 KRPSPPYILWCKDQWNEAKKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAY 233
KRP YI + + +NP+A +I+ + A+W+ + K E++Y+ E+ +
Sbjct: 54 KRPVNAYIRFLQSVRPSLLAKNPKASPTDISKLAAAQWQVLDPASKSKLEDEYKKEQTVW 113
Query: 234 LQVMAKERRESEAMKLLEEEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPLKPKHPV 293
LQ AK + L ++ KQ E + +++A +E KK KE +PK P+
Sbjct: 114 LQKNAKY------LSQLTDQQKQDIRQARTE---KTEEKAKREYKKKVKELG--RPKRPL 162
Query: 294 TAYFLFSSERRAALLADNKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEA 353
+ L+ ++++ L+ +N L++ K+ ++W +++ K PY A + KY E+++
Sbjct: 163 NGFLLYCADKKPKNLSKEENKLQL-KLMAQKWAALSDMDKAPYNTRAAEALVKYREDIKN 221
Query: 354 YKRRM 358
++ +M
Sbjct: 222 WEDKM 226
>gi|71142469|emb|CAH60727.1| transcription factor A [Pan paniscus]
gi|71142471|emb|CAH60728.1| transcription factor A [Pan troglodytes]
gi|71142477|emb|CAH60731.1| transcription factor A [Papio anubis]
Length = 160
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 192 KKENPEAEFKEITNILGAKWKNVSAEEKKPYEEKYQAEKEAYLQVMAKERRESEAMKLLE 251
K +NP+A+ E+ + +W+ + +KK Y++ Y+AE + Y + +++ + + +++
Sbjct: 7 KAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMS 66
Query: 252 EEHKQKTAMELLEQYLQFKQEADKENKKPKKEKDPL-KPKHPVTAYFLFSSERRAALLAD 310
E E+++++L+ K KKE L KPK P +AY ++ +ER D
Sbjct: 67 LEK------EIMDKHLKRKAMTK------KKELTLLGKPKRPRSAYNVYVAERFQEAKGD 114
Query: 311 NKNVLEVAKITGEEWKNMTEEQKRPYEEIAKKNKEKYNEEMEAYKRRM 358
+ E K E WKN+++ +K Y + AK+++ +Y+ EM++++ +M
Sbjct: 115 SPQ--EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQM 160
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.122 0.330
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,474,807,407
Number of Sequences: 23463169
Number of extensions: 241819429
Number of successful extensions: 2498921
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8804
Number of HSP's successfully gapped in prelim test: 51016
Number of HSP's that attempted gapping in prelim test: 1815736
Number of HSP's gapped (non-prelim): 356965
length of query: 363
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 219
effective length of database: 8,980,499,031
effective search space: 1966729287789
effective search space used: 1966729287789
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 77 (34.3 bits)