Query 017940
Match_columns 363
No_of_seqs 187 out of 2016
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 04:46:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017940.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017940hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 8.6E-38 1.9E-42 290.6 30.4 315 5-330 10-334 (358)
2 PRK11272 putative DMT superfam 100.0 7.6E-33 1.6E-37 253.3 29.5 280 8-327 8-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 7.1E-32 1.5E-36 247.7 28.6 280 9-327 5-290 (299)
4 PRK11689 aromatic amino acid e 100.0 9.6E-32 2.1E-36 246.3 26.3 285 6-327 2-290 (295)
5 PRK15430 putative chlorampheni 100.0 3.5E-31 7.7E-36 242.6 25.9 282 1-325 1-286 (296)
6 PRK10532 threonine and homoser 100.0 1.8E-30 3.9E-35 237.7 28.5 277 5-328 9-285 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 1.2E-30 2.7E-35 235.1 27.0 258 20-319 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 2.4E-29 5.3E-34 231.5 26.6 282 12-328 6-297 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 1.6E-27 3.6E-32 216.9 25.3 275 9-321 2-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 3E-27 6.5E-32 215.5 26.6 300 7-333 12-314 (334)
11 PTZ00343 triose or hexose phos 100.0 3.7E-26 7.9E-31 213.6 27.4 283 7-325 48-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 1.4E-25 3.1E-30 201.6 24.5 248 8-299 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 1.6E-23 3.4E-28 191.4 29.1 283 5-325 4-288 (292)
14 COG2962 RarD Predicted permeas 99.9 5.7E-22 1.2E-26 172.3 24.9 283 1-327 1-286 (293)
15 COG5006 rhtA Threonine/homoser 99.9 1.3E-21 2.8E-26 165.7 24.6 275 9-329 13-287 (292)
16 KOG4510 Permease of the drug/m 99.9 5.1E-25 1.1E-29 187.3 1.7 291 5-327 35-328 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 2.9E-21 6.3E-26 176.1 22.8 279 9-325 2-289 (290)
18 PF08449 UAA: UAA transporter 99.9 4.6E-19 1E-23 163.0 25.7 267 36-329 31-302 (303)
19 KOG2765 Predicted membrane pro 99.8 3.1E-19 6.7E-24 159.4 15.1 232 72-328 159-394 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 2E-18 4.3E-23 155.8 12.0 273 24-331 33-314 (316)
21 COG2510 Predicted membrane pro 99.7 9.8E-17 2.1E-21 122.0 10.5 135 8-150 3-138 (140)
22 KOG2766 Predicted membrane pro 99.7 1.2E-17 2.6E-22 141.7 4.9 285 8-328 18-303 (336)
23 KOG1580 UDP-galactose transpor 99.7 1.1E-15 2.3E-20 128.4 15.0 269 37-335 53-324 (337)
24 KOG2234 Predicted UDP-galactos 99.7 2.5E-13 5.4E-18 122.0 28.0 299 8-329 15-327 (345)
25 KOG1581 UDP-galactose transpor 99.6 3.5E-14 7.5E-19 124.1 16.4 265 36-328 50-317 (327)
26 KOG1444 Nucleotide-sugar trans 99.6 3.4E-13 7.3E-18 119.5 22.6 285 8-330 12-306 (314)
27 PF04142 Nuc_sug_transp: Nucle 99.6 1E-13 2.2E-18 122.6 17.7 231 67-315 12-244 (244)
28 KOG1443 Predicted integral mem 99.6 6.3E-13 1.4E-17 116.2 20.6 256 35-324 42-315 (349)
29 PF00892 EamA: EamA-like trans 99.5 1.7E-14 3.8E-19 114.6 8.3 125 18-150 1-125 (126)
30 KOG1442 GDP-fucose transporter 99.5 3.1E-14 6.7E-19 122.3 9.6 267 37-334 61-337 (347)
31 COG2510 Predicted membrane pro 99.5 3.5E-13 7.5E-18 102.8 12.6 136 186-324 4-139 (140)
32 PF00892 EamA: EamA-like trans 99.4 6.1E-13 1.3E-17 105.7 9.5 125 195-323 1-125 (126)
33 PF06800 Sugar_transport: Suga 99.4 2.2E-10 4.7E-15 101.1 23.5 254 35-321 10-268 (269)
34 COG5070 VRG4 Nucleotide-sugar 99.3 2.7E-11 5.9E-16 101.3 12.8 276 25-331 23-303 (309)
35 KOG3912 Predicted integral mem 99.3 3.9E-11 8.5E-16 103.7 13.7 279 21-323 16-333 (372)
36 TIGR00950 2A78 Carboxylate/Ami 99.3 3.9E-11 8.4E-16 108.0 14.4 133 6-147 126-260 (260)
37 PRK13499 rhamnose-proton sympo 99.3 1.9E-09 4.1E-14 99.0 24.6 300 5-326 4-343 (345)
38 PF13536 EmrE: Multidrug resis 99.3 1.3E-11 2.9E-16 96.3 6.9 105 42-153 2-108 (113)
39 KOG1583 UDP-N-acetylglucosamin 99.2 5.4E-11 1.2E-15 102.7 10.8 266 37-325 33-315 (330)
40 PRK10532 threonine and homoser 99.2 6.5E-10 1.4E-14 101.9 15.9 136 7-152 147-282 (293)
41 PF03151 TPT: Triose-phosphate 99.2 5.8E-10 1.3E-14 92.0 13.7 138 186-324 1-153 (153)
42 PRK11272 putative DMT superfam 99.2 7.9E-10 1.7E-14 101.3 14.6 137 7-151 149-285 (292)
43 KOG4314 Predicted carbohydrate 99.1 1.8E-10 3.8E-15 94.7 8.1 212 84-328 64-280 (290)
44 PRK15430 putative chlorampheni 99.1 1.3E-09 2.8E-14 100.0 14.2 138 182-323 5-144 (296)
45 PLN00411 nodulin MtN21 family 99.1 1.8E-09 3.9E-14 101.1 14.6 140 8-156 189-333 (358)
46 TIGR03340 phn_DUF6 phosphonate 99.1 3.4E-09 7.5E-14 96.5 15.1 134 187-325 3-136 (281)
47 TIGR00688 rarD rarD protein. T 99.1 2.4E-09 5.2E-14 96.2 13.8 136 185-323 2-141 (256)
48 PRK11689 aromatic amino acid e 99.0 5E-09 1.1E-13 96.1 13.6 133 7-151 155-287 (295)
49 PF05653 Mg_trans_NIPA: Magnes 99.0 1.6E-08 3.5E-13 92.2 15.8 281 1-327 1-295 (300)
50 PRK11453 O-acetylserine/cystei 98.9 2.1E-08 4.7E-13 92.1 14.5 139 7-151 142-287 (299)
51 KOG1582 UDP-galactose transpor 98.9 4.8E-08 1E-12 84.5 14.9 261 34-328 70-336 (367)
52 PRK02971 4-amino-4-deoxy-L-ara 98.9 5.8E-08 1.3E-12 77.0 13.5 123 185-328 2-126 (129)
53 COG4975 GlcU Putative glucose 98.9 3.9E-10 8.3E-15 96.0 0.6 276 8-324 2-285 (288)
54 TIGR00803 nst UDP-galactose tr 98.9 3E-08 6.4E-13 87.1 12.2 210 100-322 5-222 (222)
55 TIGR00817 tpt Tpt phosphate/ph 98.8 1.9E-08 4.2E-13 92.6 10.4 140 7-152 144-294 (302)
56 PF13536 EmrE: Multidrug resis 98.8 3.5E-08 7.7E-13 76.9 9.1 107 220-327 3-109 (113)
57 PF03151 TPT: Triose-phosphate 98.7 2.5E-07 5.4E-12 76.1 12.6 133 9-148 1-150 (153)
58 PTZ00343 triose or hexose phos 98.7 3.7E-07 8.1E-12 85.6 14.1 139 7-151 193-348 (350)
59 TIGR00776 RhaT RhaT L-rhamnose 98.6 5.8E-07 1.3E-11 82.1 13.0 129 7-151 151-288 (290)
60 PRK15051 4-amino-4-deoxy-L-ara 98.6 5.5E-07 1.2E-11 69.7 10.3 68 77-150 41-108 (111)
61 COG0697 RhaT Permeases of the 98.6 1.4E-06 3E-11 79.3 14.6 134 7-151 153-287 (292)
62 KOG2922 Uncharacterized conser 98.6 3.2E-07 6.9E-12 81.7 9.4 277 5-327 18-309 (335)
63 COG2962 RarD Predicted permeas 98.6 1.2E-06 2.6E-11 77.2 12.6 140 184-326 6-146 (293)
64 COG5006 rhtA Threonine/homoser 98.5 9.3E-07 2E-11 76.0 10.6 137 6-151 146-282 (292)
65 PRK15051 4-amino-4-deoxy-L-ara 98.5 1E-06 2.2E-11 68.2 9.8 66 258-323 43-108 (111)
66 PRK02971 4-amino-4-deoxy-L-ara 98.4 3.9E-06 8.5E-11 66.5 10.6 119 8-151 2-122 (129)
67 PF06027 DUF914: Eukaryotic pr 98.1 4.5E-05 9.8E-10 70.4 13.0 142 5-154 165-308 (334)
68 PF04657 DUF606: Protein of un 98.0 0.00016 3.5E-09 58.1 12.9 131 187-321 3-138 (138)
69 KOG4510 Permease of the drug/m 98.0 2.4E-06 5.2E-11 74.1 1.1 138 182-327 35-172 (346)
70 PF06379 RhaT: L-rhamnose-prot 98.0 0.0033 7.1E-08 57.3 21.1 302 5-325 4-341 (344)
71 PF06800 Sugar_transport: Suga 98.0 8.2E-05 1.8E-09 66.1 10.6 116 6-129 136-251 (269)
72 PRK10452 multidrug efflux syst 97.9 5.9E-05 1.3E-09 58.7 7.8 68 259-326 37-105 (120)
73 PF08449 UAA: UAA transporter 97.9 0.00036 7.7E-09 64.3 14.1 128 197-330 12-142 (303)
74 PRK09541 emrE multidrug efflux 97.8 0.00013 2.7E-09 56.2 7.8 67 260-326 38-105 (110)
75 COG3238 Uncharacterized protei 97.8 0.00088 1.9E-08 53.9 12.4 139 185-326 5-148 (150)
76 PF05653 Mg_trans_NIPA: Magnes 97.7 0.00027 6E-09 64.6 9.4 121 182-327 4-125 (300)
77 PRK09541 emrE multidrug efflux 97.5 0.0003 6.5E-09 54.1 6.5 66 80-151 37-103 (110)
78 PRK10452 multidrug efflux syst 97.5 0.00023 5E-09 55.5 5.9 67 79-151 36-103 (120)
79 COG2076 EmrE Membrane transpor 97.5 0.00056 1.2E-08 51.6 7.4 65 262-326 40-105 (106)
80 COG2076 EmrE Membrane transpor 97.5 0.00027 5.9E-09 53.2 5.7 65 81-151 38-103 (106)
81 PRK10650 multidrug efflux syst 97.5 0.003 6.4E-08 48.4 11.1 63 261-323 44-107 (109)
82 PF10639 UPF0546: Uncharacteri 97.5 0.00031 6.6E-09 53.9 5.7 110 14-149 2-112 (113)
83 PRK10650 multidrug efflux syst 97.5 0.001 2.2E-08 50.9 8.6 63 81-149 43-106 (109)
84 KOG1441 Glucose-6-phosphate/ph 97.4 0.00047 1E-08 63.0 7.6 139 6-152 161-308 (316)
85 PRK11431 multidrug efflux syst 97.4 0.00045 9.7E-09 52.6 6.1 66 80-151 36-102 (105)
86 PRK11431 multidrug efflux syst 97.4 0.00091 2E-08 50.9 7.7 64 261-324 38-102 (105)
87 PRK13499 rhamnose-proton sympo 97.4 0.0014 3E-08 60.7 10.1 137 183-326 5-155 (345)
88 PF04657 DUF606: Protein of un 97.3 0.0029 6.2E-08 50.9 10.3 130 10-148 3-138 (138)
89 PF04142 Nuc_sug_transp: Nucle 97.1 0.0019 4.1E-08 57.4 7.5 78 251-329 17-94 (244)
90 KOG2765 Predicted membrane pro 97.1 0.0034 7.4E-08 57.5 8.9 143 5-153 244-392 (416)
91 PF00893 Multi_Drug_Res: Small 97.0 0.0028 6.1E-08 47.3 6.9 55 81-141 37-92 (93)
92 COG4975 GlcU Putative glucose 96.9 0.00068 1.5E-08 58.5 3.2 132 186-327 3-139 (288)
93 PF00893 Multi_Drug_Res: Small 96.9 0.0022 4.8E-08 47.8 5.6 55 261-315 38-93 (93)
94 PF07857 DUF1632: CEO family ( 96.9 0.0043 9.4E-08 54.9 8.3 132 186-329 1-139 (254)
95 PF07857 DUF1632: CEO family ( 96.8 0.013 2.8E-07 52.0 10.5 191 9-210 1-208 (254)
96 KOG1581 UDP-galactose transpor 96.2 0.08 1.7E-06 47.5 11.1 140 5-152 169-314 (327)
97 PF10639 UPF0546: Uncharacteri 96.1 0.016 3.4E-07 44.5 5.7 109 192-322 3-112 (113)
98 KOG2234 Predicted UDP-galactos 96.1 0.32 6.9E-06 44.8 14.7 141 185-326 15-166 (345)
99 COG3238 Uncharacterized protei 95.9 0.11 2.3E-06 42.0 9.8 138 6-150 3-145 (150)
100 KOG2922 Uncharacterized conser 95.6 0.0066 1.4E-07 54.7 1.8 127 180-330 16-142 (335)
101 TIGR00803 nst UDP-galactose tr 95.4 0.037 8.1E-07 48.4 6.1 60 83-148 162-221 (222)
102 KOG1444 Nucleotide-sugar trans 94.2 1.9 4.1E-05 39.2 13.5 133 186-324 13-149 (314)
103 KOG4314 Predicted carbohydrate 94.0 0.047 1E-06 45.7 2.8 63 265-327 66-128 (290)
104 KOG1580 UDP-galactose transpor 93.3 0.21 4.6E-06 43.1 5.8 137 7-151 171-313 (337)
105 PF06379 RhaT: L-rhamnose-prot 93.1 0.79 1.7E-05 42.2 9.3 144 182-329 4-158 (344)
106 COG5070 VRG4 Nucleotide-sugar 93.0 0.35 7.7E-06 41.5 6.6 136 9-151 156-296 (309)
107 KOG4831 Unnamed protein [Funct 92.3 2.1 4.5E-05 32.1 8.9 112 11-150 6-124 (125)
108 KOG1443 Predicted integral mem 89.6 3.9 8.5E-05 37.1 9.8 121 205-326 36-158 (349)
109 KOG1442 GDP-fucose transporter 89.3 1.2 2.6E-05 39.6 6.3 140 6-153 183-329 (347)
110 PRK02237 hypothetical protein; 87.8 1.5 3.2E-05 33.1 5.1 47 281-327 62-108 (109)
111 PF07168 Ureide_permease: Urei 86.5 0.37 8E-06 43.4 1.5 131 191-324 2-146 (336)
112 PF02694 UPF0060: Uncharacteri 86.2 1.8 3.8E-05 32.7 4.7 46 282-327 61-106 (107)
113 PRK02237 hypothetical protein; 86.1 4.5 9.7E-05 30.6 6.8 52 94-151 52-105 (109)
114 KOG3912 Predicted integral mem 85.7 1.1 2.5E-05 39.9 4.1 63 263-325 97-159 (372)
115 PF02694 UPF0060: Uncharacteri 84.4 3.9 8.4E-05 30.9 5.8 53 93-151 50-103 (107)
116 PF06570 DUF1129: Protein of u 75.1 53 0.0012 28.2 11.5 90 11-104 88-177 (206)
117 PF04342 DUF486: Protein of un 72.3 14 0.00031 27.8 5.6 31 112-148 75-105 (108)
118 PF07168 Ureide_permease: Urei 72.2 4.2 9E-05 36.9 3.3 129 13-148 1-143 (336)
119 KOG1582 UDP-galactose transpor 71.8 23 0.0005 31.7 7.7 139 8-153 190-334 (367)
120 PF05977 MFS_3: Transmembrane 71.6 1.1E+02 0.0024 30.5 13.6 39 284-322 352-391 (524)
121 PRK06638 NADH:ubiquinone oxido 70.9 66 0.0014 27.5 11.5 33 293-325 133-167 (198)
122 KOG4831 Unnamed protein [Funct 70.8 7.7 0.00017 29.2 3.9 59 265-323 65-124 (125)
123 PF04342 DUF486: Protein of un 70.6 6.2 0.00014 29.7 3.4 30 293-322 77-106 (108)
124 COG1742 Uncharacterized conser 67.8 21 0.00047 26.8 5.7 47 281-327 61-107 (109)
125 COG0387 ChaA Ca2+/H+ antiporte 67.0 1.1E+02 0.0025 28.7 13.9 32 302-333 161-192 (368)
126 PF03547 Mem_trans: Membrane t 65.1 1E+02 0.0023 29.0 11.7 8 228-235 40-47 (385)
127 COG3169 Uncharacterized protei 64.4 18 0.00039 26.8 4.7 33 292-324 83-115 (116)
128 PF15102 TMEM154: TMEM154 prot 60.7 11 0.00023 30.3 3.3 24 309-332 66-89 (146)
129 KOG1583 UDP-N-acetylglucosamin 60.6 86 0.0019 28.3 9.0 133 8-151 164-314 (330)
130 PF08507 COPI_assoc: COPI asso 59.8 10 0.00022 30.2 3.1 16 308-323 89-104 (136)
131 COG3086 RseC Positive regulato 58.1 15 0.00032 29.5 3.6 29 272-300 68-96 (150)
132 KOG2766 Predicted membrane pro 57.7 12 0.00026 33.2 3.3 136 5-150 163-298 (336)
133 COG1742 Uncharacterized conser 57.0 82 0.0018 23.7 7.7 47 99-151 57-104 (109)
134 PRK13108 prolipoprotein diacyl 56.0 2.1E+02 0.0045 28.1 16.8 24 304-327 254-277 (460)
135 PF05961 Chordopox_A13L: Chord 53.7 10 0.00022 25.9 1.7 24 308-331 6-29 (68)
136 TIGR02865 spore_II_E stage II 51.0 2.1E+02 0.0046 30.1 11.8 43 100-148 11-53 (764)
137 PRK09412 anaerobic C4-dicarbox 48.6 2.6E+02 0.0057 27.1 11.6 14 112-125 6-19 (433)
138 PF09656 PGPGW: Putative trans 47.3 42 0.00092 21.9 3.8 44 136-210 6-49 (53)
139 PF03595 SLAC1: Voltage-depend 46.9 2.3E+02 0.0051 26.0 12.9 77 136-234 7-91 (330)
140 PF04246 RseC_MucC: Positive r 44.9 19 0.00041 28.6 2.5 26 274-299 63-88 (135)
141 TIGR00892 2A0113 monocarboxyla 44.2 1.8E+02 0.0038 28.2 9.6 12 10-21 18-29 (455)
142 PHA03049 IMV membrane protein; 43.8 18 0.00039 24.6 1.8 23 308-330 6-28 (68)
143 COG4657 RnfA Predicted NADH:ub 43.1 96 0.0021 25.5 6.0 51 182-232 129-184 (193)
144 KOG1623 Multitransmembrane pro 42.4 2.5E+02 0.0053 24.9 9.0 32 180-211 123-154 (243)
145 PF08693 SKG6: Transmembrane a 36.5 33 0.0007 21.0 1.9 19 310-328 21-39 (40)
146 PF00689 Cation_ATPase_C: Cati 36.0 2.4E+02 0.0053 23.1 9.9 117 35-151 4-144 (182)
147 PRK10666 ammonium transporter; 35.5 4.3E+02 0.0092 25.7 15.1 52 185-237 305-356 (428)
148 TIGR02840 spore_YtaF putative 34.6 61 0.0013 27.9 4.2 47 277-323 32-80 (206)
149 COG4858 Uncharacterized membra 34.6 2.8E+02 0.0062 23.4 9.8 92 9-105 101-193 (226)
150 PF01102 Glycophorin_A: Glycop 33.6 40 0.00088 26.3 2.6 46 290-346 66-111 (122)
151 PF11381 DUF3185: Protein of u 32.5 87 0.0019 21.0 3.6 18 135-152 1-18 (59)
152 COG2271 UhpC Sugar phosphate p 31.9 3.1E+02 0.0067 26.7 8.5 129 190-332 70-213 (448)
153 TIGR01167 LPXTG_anchor LPXTG-m 31.1 72 0.0016 18.1 2.9 16 305-320 11-26 (34)
154 PF15099 PIRT: Phosphoinositid 31.0 55 0.0012 25.6 2.8 17 252-268 57-73 (129)
155 PF15108 TMEM37: Voltage-depen 30.1 1.8E+02 0.0039 23.7 5.7 76 136-230 92-169 (184)
156 PF11446 DUF2897: Protein of u 29.6 25 0.00054 23.2 0.7 12 312-323 8-19 (55)
157 PRK10599 calcium/sodium:proton 28.8 5.1E+02 0.011 24.6 12.6 32 192-223 47-80 (366)
158 COG5336 Uncharacterized protei 27.9 78 0.0017 24.1 3.1 31 288-318 55-86 (116)
159 PF08229 SHR3_chaperone: ER me 27.7 23 0.00049 30.2 0.3 11 313-323 141-151 (196)
160 PF05297 Herpes_LMP1: Herpesvi 26.9 21 0.00046 32.0 0.0 52 91-148 41-94 (381)
161 PRK10862 SoxR reducing system 26.0 38 0.00083 27.7 1.3 26 274-299 70-95 (154)
162 PF13038 DUF3899: Domain of un 25.9 36 0.00079 24.9 1.1 19 305-323 3-21 (92)
163 PF11044 TMEMspv1-c74-12: Plec 25.6 40 0.00087 20.9 1.0 17 304-320 2-18 (49)
164 PF15048 OSTbeta: Organic solu 25.0 53 0.0012 25.6 1.8 27 297-323 25-55 (125)
165 PF06123 CreD: Inner membrane 24.8 6.5E+02 0.014 24.5 11.6 60 119-210 317-376 (430)
166 PF07698 7TM-7TMR_HD: 7TM rece 22.8 4.5E+02 0.0098 21.9 16.0 32 204-236 121-152 (194)
167 PF15471 TMEM171: Transmembran 22.2 85 0.0019 28.0 2.8 24 306-329 161-184 (319)
168 PF12292 DUF3624: Protein of u 21.0 2.4E+02 0.0053 20.0 4.3 46 12-58 25-70 (77)
169 COG4147 DhlC Predicted symport 20.8 3.2E+02 0.007 26.9 6.5 59 269-327 439-509 (529)
170 PF15345 TMEM51: Transmembrane 20.7 56 0.0012 28.5 1.4 22 310-331 67-88 (233)
171 PF04277 OAD_gamma: Oxaloaceta 20.3 80 0.0017 22.2 2.0 9 310-318 10-18 (79)
172 KOG1623 Multitransmembrane pro 20.2 6.1E+02 0.013 22.5 9.0 18 306-323 188-205 (243)
173 COG0004 AmtB Ammonia permease 20.2 7.9E+02 0.017 23.7 9.2 48 187-236 284-332 (409)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=8.6e-38 Score=290.63 Aligned_cols=315 Identities=28% Similarity=0.535 Sum_probs=249.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-CCCCcCCHHHHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWER-NSRPKLTLRILFCLFFSAIVGT 83 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 83 (363)
|..+.++.+++.-+.++...++.|...+.|++|..+.++|+.++.++++++.+.+++ +..++.+++++....+.|+++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g- 88 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG- 88 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence 457899999999999999999999999999999999999999999999988876544 333445688899999999998
Q ss_pred HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHh------CccccccccccCccceehhhHHHHhHHHhhhhcCCCc
Q 017940 84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF------GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPL 157 (363)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~------~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~ 157 (363)
+.++.+++.|++|+++++++++.++.|+++.++++++ +|||+++++ ++|+++++.|+.++...++...
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~~ 162 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPRV 162 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCccc
Confidence 7788899999999999999999999999999999999 578888777 9999999999999876444221
Q ss_pred cCCCcchhhhhhhhhcCC-CC-CCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 017940 158 FDHSYSQAETAINVMHMH-PT-RKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLA 235 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (363)
..++ +....|..+.+ +. ....+...|++++++++++||+|++.+|+..++++++...+++...++.+...+....
T Consensus 163 ~~~~---~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~ 239 (358)
T PLN00411 163 FVAS---SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLV 239 (358)
T ss_pred cccc---ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00000000000 00 1123345699999999999999999999998887666677777777777776666665
Q ss_pred hcC-CCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHH
Q 017940 236 TNR-NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSIT 314 (363)
Q Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~l 314 (363)
.++ +...+..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~L 318 (358)
T PLN00411 240 VEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGIL 318 (358)
T ss_pred HccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 543 2222321122234457777765 56899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhheecccccc
Q 017940 315 VIIGLYILLWGKNKEM 330 (363)
Q Consensus 315 i~~g~~l~~~~~~~~~ 330 (363)
+++|+++..+.++||.
T Consensus 319 Il~Gv~l~~~~~~~~~ 334 (358)
T PLN00411 319 ITLGFYAVMWGKANEE 334 (358)
T ss_pred HHHHHHHHHhhhhhhh
Confidence 9999999988666553
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=7.6e-33 Score=253.31 Aligned_cols=280 Identities=15% Similarity=0.168 Sum_probs=234.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQ 87 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (363)
.-++..++..++||.++++.|...+ +++|..++++|+.++.++++++...+++ + ..+++++......|.++...++
T Consensus 8 ~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 8 PLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999999999888 6999999999999999998887755322 2 2356788888889988767788
Q ss_pred HHHHHHh-hccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhh
Q 017940 88 YFFLLGI-QYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAE 166 (363)
Q Consensus 88 ~~~~~al-~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~ 166 (363)
.+++.+. +++++++++++.++.|+++.+++++ +|||+++++ ++|++++++|+.++...++
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~~~------------ 144 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSGGN------------ 144 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcCcc------------
Confidence 8999999 9999999999999999999999986 699999999 9999999999998863211
Q ss_pred hhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 017940 167 TAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFK 246 (363)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (363)
.+....|++++++++++||.+.+..||..++ ++...+.+....+.+...+.....+.+... ..
T Consensus 145 -------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 207 (292)
T PRK11272 145 -------------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTA--LP 207 (292)
T ss_pred -------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccc--cC
Confidence 1122379999999999999999999997654 345667788888888777776554332211 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 247 GKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
+...|..+++.+++++.+++.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++++.|+++.++.+
T Consensus 208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 44578899999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred c
Q 017940 327 N 327 (363)
Q Consensus 327 ~ 327 (363)
+
T Consensus 288 ~ 288 (292)
T PRK11272 288 Y 288 (292)
T ss_pred h
Confidence 4
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=7.1e-32 Score=247.72 Aligned_cols=280 Identities=18% Similarity=0.153 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY 88 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (363)
..++.++++++||.++++.|...+ +++|..+.++|+.++.+.++++.. ++ +.+++ .....|++.....+.
T Consensus 5 ~~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~~---~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 5 DGVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFVA---RP---KVPLN---LLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHhc---CC---CCchH---HHHHHHHHHHHHHHH
Confidence 456788999999999999999988 699999999999998776655431 11 12222 334445554455666
Q ss_pred HHHHHhhc-cCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhh
Q 017940 89 FFLLGIQY-TSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAET 167 (363)
Q Consensus 89 ~~~~al~~-~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~ 167 (363)
+++.++++ .++++++++.++.|+++.+++++++|||+++++ +++++++++|+.++...+.
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~~~------------- 135 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIEDSL------------- 135 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhccccC-------------
Confidence 78899998 588999999999999999999999999999999 9999999999998874211
Q ss_pred hhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCc--hhHHHHHHHHHHHHHHHHHHHhcCCC---cc
Q 017940 168 AINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCK--YSSTAILSLFGAIQAAILCLATNRNH---SA 242 (363)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 242 (363)
+ .......|++++++++++|+.|.+..|+..++.+++ .....+....+.+.........+.+. ..
T Consensus 136 ---------~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (299)
T PRK11453 136 ---------N-GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHS 205 (299)
T ss_pred ---------C-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhh
Confidence 0 111224799999999999999999999987653332 23334444444433333333333221 11
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940 243 WSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL 322 (363)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~ 322 (363)
+...+...|..+++.+++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+++.
T Consensus 206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 11224457899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeccc
Q 017940 323 LWGKN 327 (363)
Q Consensus 323 ~~~~~ 327 (363)
.+.++
T Consensus 286 ~~~~~ 290 (299)
T PRK11453 286 VFGLR 290 (299)
T ss_pred hcchh
Confidence 77664
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=9.6e-32 Score=246.28 Aligned_cols=285 Identities=14% Similarity=0.093 Sum_probs=215.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940 6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL 85 (363)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (363)
+.++++++++++++||.+++..|...+ +++|..+.++|+.++.++++++.. +++.++.+ + ...+.+.++...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~~---~~~~~~~~---~-~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTVG---FPRLRQFP---K-RYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHcc---cccccccc---H-HHHHHHhHHHHH
Confidence 456888999999999999999999988 699999999999999988886531 11111111 2 233445555678
Q ss_pred HHHHHHHHhhc----cCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCC
Q 017940 86 TQYFFLLGIQY----TSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHS 161 (363)
Q Consensus 86 ~~~~~~~al~~----~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~ 161 (363)
++.+++.++++ .++++++++.++.|+++.+++++++|||+++++ ++|++++++|+.++...+.. .+.
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~~~-~~~-- 144 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGDNG-LSL-- 144 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCCcc-chh--
Confidence 88888888765 577788999999999999999999999999999 99999999999998753210 000
Q ss_pred cchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 017940 162 YSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHS 241 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (363)
.+. ..+..+...|++++++++++||.|.++.||..++. ++..... ..+.+...+.....+ +.
T Consensus 145 ~~~------------~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~-~~- 206 (295)
T PRK11689 145 AEL------------INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSP-QP- 206 (295)
T ss_pred hhh------------hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhc-Cc-
Confidence 000 00111234699999999999999999999997663 5554322 223333333333322 21
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940 242 AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI 321 (363)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l 321 (363)
... .+...|..+++.++ +++++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+++
T Consensus 207 ~~~-~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~ 284 (295)
T PRK11689 207 AMV-FSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL 284 (295)
T ss_pred ccc-CCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence 111 13356777777774 7889999999999999999999999999999999999999999999999999999999988
Q ss_pred heeccc
Q 017940 322 LLWGKN 327 (363)
Q Consensus 322 ~~~~~~ 327 (363)
..+.++
T Consensus 285 ~~~~~~ 290 (295)
T PRK11689 285 CWLATR 290 (295)
T ss_pred HhhhHh
Confidence 876554
No 5
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=3.5e-31 Score=242.65 Aligned_cols=282 Identities=12% Similarity=0.077 Sum_probs=212.0
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCC---cCCHHHHHHHHH
Q 017940 1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRP---KLTLRILFCLFF 77 (363)
Q Consensus 1 M~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~ 77 (363)
|+++++.+|++++++++++||..+++.|.. + +++|.++.++|+.++.+++.++...+++.... ..+++.+.. ..
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence 666678899999999999999999999975 5 59999999999999998887776543221110 013444433 33
Q ss_pred HHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCc
Q 017940 78 SAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPL 157 (363)
Q Consensus 78 ~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~ 157 (363)
.+.++.+.++.++++|++++++++++++.++.|+++.+++++++|||+++++ ++|+++++.|+.++...++
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~--- 148 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG--- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC---
Confidence 5666678999999999999999999999999999999999999999999999 9999999999999874211
Q ss_pred cCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHh
Q 017940 158 FDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLAT 236 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (363)
+. ..++++++++||.|.+..|+..++.. +....+.+....+.....+. .
T Consensus 149 ----------------------~~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 198 (296)
T PRK15430 149 ----------------------SL-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A 198 (296)
T ss_pred ----------------------Cc-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c
Confidence 10 14688899999999999998754311 12222333333333322111 1
Q ss_pred cCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHH
Q 017940 237 NRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVI 316 (363)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~ 316 (363)
......+...+...+..+...|+ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~ 277 (296)
T PRK15430 199 DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIW 277 (296)
T ss_pred cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 11111111111112333444454 57799999999999999999999999999999999999999999999999999998
Q ss_pred HHhhhheec
Q 017940 317 IGLYILLWG 325 (363)
Q Consensus 317 ~g~~l~~~~ 325 (363)
+|+.+....
T Consensus 278 ~~~~v~~~~ 286 (296)
T PRK15430 278 VALAIFVMD 286 (296)
T ss_pred HHHHHHHHH
Confidence 888877643
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=1.8e-30 Score=237.65 Aligned_cols=277 Identities=15% Similarity=0.106 Sum_probs=223.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
.+..++.++++++++|+.++.+.|...+ +++|..+.++|++++.++++++... ++ .+.++++++..+..|.+ ..
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~-~~ 82 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVS-LG 82 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHH-HH
Confidence 3468999999999999999999999998 5999999999999999888876532 11 13467888888888887 58
Q ss_pred HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940 85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ 164 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~ 164 (363)
..+.++++++++++++.++++..+.|+++.+++ +||++ + ..++.+++.|+.++...+. +
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~------~~~~~i~~~Gv~li~~~~~-~-------- 141 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--D------FVWVVLAVLGLWFLLPLGQ-D-------- 141 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--H------HHHHHHHHHHHheeeecCC-C--------
Confidence 888999999999999999999999999998876 35443 3 4567788999988763211 1
Q ss_pred hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 017940 165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS 244 (363)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (363)
.......|++++++++++||.|.+..|+..++. ++... .+....+.+...+.....+. ...+
T Consensus 142 --------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~- 203 (293)
T PRK10532 142 --------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG-EALW- 203 (293)
T ss_pred --------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC-cccC-
Confidence 011234799999999999999999999998763 55555 45556666666666654332 1111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940 245 FKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 324 (363)
+...|..++++|++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+....+
T Consensus 204 --~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 204 --HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 234566678999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred cccc
Q 017940 325 GKNK 328 (363)
Q Consensus 325 ~~~~ 328 (363)
..+|
T Consensus 282 ~~~~ 285 (293)
T PRK10532 282 TIRR 285 (293)
T ss_pred cCCC
Confidence 6544
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=1.2e-30 Score=235.13 Aligned_cols=258 Identities=16% Similarity=0.193 Sum_probs=220.1
Q ss_pred HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 017940 20 FATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSA 99 (363)
Q Consensus 20 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 99 (363)
||.+++..|...+.+.++....+.|+..+.+++.+....+ .+++++.+....|.++..+++.+++.|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999888678999999999999988887765321 345677788888888889999999999999999
Q ss_pred cchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCC
Q 017940 100 TFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRK 179 (363)
Q Consensus 100 ~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (363)
++++++.++.|+++.+++++++|||+++++ ++|++++++|+.++...+ +
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~~~--~----------------------- 122 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLSDG--N----------------------- 122 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhccCC--c-----------------------
Confidence 999999999999999999999999999999 999999999999986321 1
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHH
Q 017940 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAG 258 (363)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 258 (363)
.+....|+.++++++++|+.+.+..|+..++.+ ++.....+.+..+.++..+.....+++. .. +...|..+++.+
T Consensus 123 ~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~ 198 (260)
T TIGR00950 123 LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLG 198 (260)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHH
Confidence 123358999999999999999999999987643 2345555778888888888776644322 11 345677788999
Q ss_pred HHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHh
Q 017940 259 IVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGL 319 (363)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~ 319 (363)
++++.+++.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+.+++.|+
T Consensus 199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=2.4e-29 Score=231.47 Aligned_cols=282 Identities=13% Similarity=0.048 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017940 12 AMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFL 91 (363)
Q Consensus 12 ~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 91 (363)
+.++-..+--...++.|...++-..|..++++|+.++.+.+.+... .+.++.++.++++++..+..|++. +.++.+.+
T Consensus 6 ~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~ 83 (302)
T TIGR00817 6 LFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSN 83 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 3344444455556788998884366999999999998877655521 122334457899999999999995 88999999
Q ss_pred HHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhh
Q 017940 92 LGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINV 171 (363)
Q Consensus 92 ~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~ 171 (363)
.|++|+++++++++.++.|+++.+++++++|||+++++ ++|+++++.|+.+... +
T Consensus 84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~----------------- 138 (302)
T TIGR00817 84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--T----------------- 138 (302)
T ss_pred HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--C-----------------
Confidence 99999999999999999999999999999999999999 9999999999987542 1
Q ss_pred hcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhc--cCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc-c--cc--
Q 017940 172 MHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGK--RYPCKYSSTAILSLFGAIQAAILCLATNRNHS-A--WS-- 244 (363)
Q Consensus 172 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-- 244 (363)
+ .+....|++++++++++|+++.+..||..+ + .|+...+.+++..+.+.+.|.....++... . +.
T Consensus 139 ------~-~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~ 210 (302)
T TIGR00817 139 ------E-LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQA 210 (302)
T ss_pred ------c-ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHh
Confidence 1 112247999999999999999999999887 5 378999999999999999998876553111 0 00
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940 245 ---FKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI 321 (363)
Q Consensus 245 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l 321 (363)
......+...+..++.+....+.++++++++++|++.++..+++|+++++++++++||+++..+++|.++++.|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l 290 (302)
T TIGR00817 211 ISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL 290 (302)
T ss_pred hcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence 00001122222333322333334566899999999999999999999999999999999999999999999999999
Q ss_pred heecccc
Q 017940 322 LLWGKNK 328 (363)
Q Consensus 322 ~~~~~~~ 328 (363)
+++.|++
T Consensus 291 ~~~~k~~ 297 (302)
T TIGR00817 291 YSRVKAQ 297 (302)
T ss_pred HHHHhcc
Confidence 9865543
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=1.6e-27 Score=216.94 Aligned_cols=275 Identities=15% Similarity=0.136 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhc-cCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWE-RNSRPKLTLRILFCLFFSAIVGTSLTQ 87 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (363)
.+++.++++++|+..++..|...++ -++. .++++....+++.++...+. ++.++..+++.+. ..+.+.++...++
T Consensus 2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 77 (281)
T TIGR03340 2 ALTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWL-LLAISAVANMVYF 77 (281)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHH-HHHHHHHHHHHHH
Confidence 3578899999999999999977663 4443 46667777777777765532 2223323344444 4444445568999
Q ss_pred HHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhh
Q 017940 88 YFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAET 167 (363)
Q Consensus 88 ~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~ 167 (363)
.++++|++++++++++++.++.|+++.+++++++|||+++++ ++|+.+++.|+.++...+.
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~~------------- 138 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSRF------------- 138 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcccc-------------
Confidence 999999999999999999999999999999999999999999 9999999999998874221
Q ss_pred hhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHH-HHHHHHh--cCCCcccc
Q 017940 168 AINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQA-AILCLAT--NRNHSAWS 244 (363)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~ 244 (363)
...+..|+.++++++++|+.|.+..|+..++. ++..........+.+.. .+..... .++. ...
T Consensus 139 ------------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 204 (281)
T TIGR03340 139 ------------AQHRRKAYAWALAAALGTAIYSLSDKAAALGV-PAFYSALGYLGIGFLAMGWPFLLLYLKRHGR-SMF 204 (281)
T ss_pred ------------cccchhHHHHHHHHHHHHHHhhhhccccccch-hcccccHHHHHHHHHHHHHHHHHHHHHHhcc-chh
Confidence 11123678899999999999999988875543 22221111111222111 2222211 1111 111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940 245 FKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI 321 (363)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l 321 (363)
.....+..+++.+.+.+.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus 205 -~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 205 -PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 1223455667788888999999999999999999999999999999999999999999999999999999999875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=3e-27 Score=215.54 Aligned_cols=300 Identities=17% Similarity=0.208 Sum_probs=237.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccC-CCCcCCHHHHHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERN-SRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
.+..++.=..+++-..+..++....+.|.+ |....++.+..-.++..++..+++.. ++.+..+++|++.++.+++. +
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v 90 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-V 90 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-H
Confidence 345556666677777778888777766666 88888888887777777766655432 22333456777888889995 8
Q ss_pred HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940 85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ 164 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~ 164 (363)
.++++.+.|++|++.+.++++.++..+++.+++++++|||+++.| ++|+++++.|+.++...|....+.
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~~----- 159 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGSD----- 159 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeeccccccc-----
Confidence 999999999999999999999999999999999999999999999 999999999999988755332111
Q ss_pred hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc
Q 017940 165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN-HSAW 243 (363)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (363)
+++..+...|++++++++++||+++++.++..++. +......+..+++.+++.+.....|.+ ....
T Consensus 160 ------------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~ 226 (334)
T PF06027_consen 160 ------------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESI 226 (334)
T ss_pred ------------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhcc
Confidence 22356678999999999999999999999999985 667888888888998888887776652 2222
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940 244 SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 323 (363)
.+.. ..+. .+....++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|.++++
T Consensus 227 ~w~~-~~~~-~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~ 304 (334)
T PF06027_consen 227 HWTS-QVIG-LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYN 304 (334)
T ss_pred CCCh-hhHH-HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEE
Confidence 2222 2222 2222334566778888899999999999999999999999999999999999999999999999999999
Q ss_pred ecccccchhc
Q 017940 324 WGKNKEMQNC 333 (363)
Q Consensus 324 ~~~~~~~~~~ 333 (363)
..++++.++.
T Consensus 305 ~~~~~~~~~~ 314 (334)
T PF06027_consen 305 LAESPEEEAR 314 (334)
T ss_pred ccCCcccccc
Confidence 8776654444
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=3.7e-26 Score=213.57 Aligned_cols=283 Identities=13% Similarity=0.116 Sum_probs=221.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcC--CHHHHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKL--TLRILFCLFFSAIVGT 83 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~ 83 (363)
.+..++.+....+-....+..|..++ .++ |..++++|++++.++..+..... .++.++. .+++++..+..|+++.
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 45566666666677777888999988 599 99999999999987765543322 2222333 3457888999999974
Q ss_pred HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940 84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS 163 (363)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~ 163 (363)
. .+...+.|+++++++.++++.++.|+++++++++++|||+++++ ++++++++.|+++.+..+
T Consensus 126 ~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~~~---------- 188 (350)
T PTZ00343 126 F-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASVKE---------- 188 (350)
T ss_pred H-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheeccc----------
Confidence 4 46667899999999999999999999999999999999999999 999999999999987411
Q ss_pred hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC------CchhHHHHHHHHHHHHHHHHHHHhc
Q 017940 164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP------CKYSSTAILSLFGAIQAAILCLATN 237 (363)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (363)
.+. ...|++++++++++|+++.+..|+..++.+ ++.....+....+.++++|.....|
T Consensus 189 ---------------~~~-~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e 252 (350)
T PTZ00343 189 ---------------LHF-TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE 252 (350)
T ss_pred ---------------chh-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112 247999999999999999999999886532 3445556668889999999887654
Q ss_pred CCC--cccc----cccchhHHHHHHHHHHHHHHHHHHhhh----hcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchh
Q 017940 238 RNH--SAWS----FKGKIEIISVLYAGIVGSGLCYVGLTW----CVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIG 307 (363)
Q Consensus 238 ~~~--~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~----a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~ 307 (363)
... ..+. ......+..+++. ++.+++++.+++. +++++++...+...+++|+++++++++++||++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~ 331 (350)
T PTZ00343 253 GKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL 331 (350)
T ss_pred hHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence 311 1010 0011122334443 4557888998884 999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhheec
Q 017940 308 SLLGSITVIIGLYILLWG 325 (363)
Q Consensus 308 ~~~G~~li~~g~~l~~~~ 325 (363)
+++|.+++++|++++++.
T Consensus 332 ~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 332 GYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHHHHHHHHHHHHHHhhc
Confidence 999999999999998764
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=1.4e-25 Score=201.58 Aligned_cols=248 Identities=11% Similarity=0.097 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCC-----CCcCCHHH-HHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNS-----RPKLTLRI-LFCLFFSAIV 81 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~ 81 (363)
+|++++++++++||.++++.|. .+ +++|.+++++|++++.++++++...+++++ .++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 45 599999999999999988877664432211 11122333 4445666766
Q ss_pred HHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCC
Q 017940 82 GTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHS 161 (363)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~ 161 (363)
.+.++.+++.|++++++++++++.++.|+++.+++++++|||+++++ ++++++++.|+.++...++
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 58999999999999999999999999999999999999999999999 9999999999998864211
Q ss_pred cchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 017940 162 YSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHS 241 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (363)
+. ..++++++++||.|.+..|+..++ +........ ........+.....+.. .
T Consensus 146 ------------------~~-----~~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 198 (256)
T TIGR00688 146 ------------------SL-----PWEALVLAFSFTAYGLIRKALKNT--DLAGFCLET-LSLMPVAIYYLLQTDFA-T 198 (256)
T ss_pred ------------------Cc-----hHHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHH-HHHHHHHHHHHHHhccC-c
Confidence 10 135788999999999999997654 222222211 11111222111111111 1
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHH
Q 017940 242 AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299 (363)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~ 299 (363)
.........|..+++.|++ +.++|.++++++++.++++++++.+++|+++.+++.++
T Consensus 199 ~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 199 VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred ccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1111122378888888876 78999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=1.6e-23 Score=191.42 Aligned_cols=283 Identities=23% Similarity=0.310 Sum_probs=219.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
+...+....++..+.|+......|...+...++....+.|...+.+...+..... +.... ...+.+.+..+.+.++..
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLE-PRGLR-PALRPWLLLLLLALLGLA 81 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhh-ccccc-ccccchHHHHHHHHHHHH
Confidence 4567888899999999999999998877436667777779999888844333221 11111 112224556666777789
Q ss_pred HHHHHHHHHhhccCccchhhhcchhhHHHHHHHH-HhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940 85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIAL-PFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS 163 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~-l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~ 163 (363)
.++.+++.++++++++.++++.++.|+++.+++. +++|||+++++ ++++.+.+.|+.++...+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~~------ 149 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGGG------ 149 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcch------
Confidence 9999999999999999999999999999999997 77799999999 9999999999999986332110
Q ss_pred hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHH-HHHHHHHHHHHHHHHHhcCCCcc
Q 017940 164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA-ILSLFGAIQAAILCLATNRNHSA 242 (363)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (363)
.. ...|+.+++.++++++.+.+..|+.. + .++..... +... .............. .
T Consensus 150 ----------------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~- 206 (292)
T COG0697 150 ----------------IL-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLL--LALLLLLLFFLSGF-G- 206 (292)
T ss_pred ----------------hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHH--HHHHHHHHHHhccc-c-
Confidence 11 46899999999999999999999988 4 34455554 3333 11221211211111 1
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940 243 WSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL 322 (363)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~ 322 (363)
.......|..+.+.|++++++++.++++++++.++...+++.+++|+++.++++++++|+++..+++|+.+++.|+.+.
T Consensus 207 -~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~ 285 (292)
T COG0697 207 -APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLA 285 (292)
T ss_pred -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 1123457888899999988899999999999999999999999999999999999999999999999999999999998
Q ss_pred eec
Q 017940 323 LWG 325 (363)
Q Consensus 323 ~~~ 325 (363)
..+
T Consensus 286 ~~~ 288 (292)
T COG0697 286 SLR 288 (292)
T ss_pred hcc
Confidence 866
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.91 E-value=5.7e-22 Score=172.35 Aligned_cols=283 Identities=10% Similarity=0.101 Sum_probs=229.2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCC---cCCHHHHHHHHH
Q 017940 1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRP---KLTLRILFCLFF 77 (363)
Q Consensus 1 M~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~ 77 (363)
|+ .+..+|+++.+.+.++||..+.+.|.. + ..++.++...|...+.++++.+....++.+.. ..+++.+....+
T Consensus 1 ~~-~~~~~Gil~~l~Ay~lwG~lp~y~kll-~-~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l 77 (293)
T COG2962 1 MA-KDSRKGILLALLAYLLWGLLPLYFKLL-E-PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLAL 77 (293)
T ss_pred CC-CcccchhHHHHHHHHHHHHHHHHHHHH-c-cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHH
Confidence 55 345789999999999999999999965 5 49999999999999999888777665432211 124566777777
Q ss_pred HHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCc
Q 017940 78 SAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPL 157 (363)
Q Consensus 78 ~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~ 157 (363)
.+++ ...++..|.+|.+....-+++.=+..+|++.++++.+++|||+++.| +++++++.+||....+..+.
T Consensus 78 ~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~-- 148 (293)
T COG2962 78 TALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS-- 148 (293)
T ss_pred HHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC--
Confidence 7877 79999999999999999999999999999999999999999999999 99999999999998874331
Q ss_pred cCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhc
Q 017940 158 FDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATN 237 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (363)
.. ..++.=++.|+.|....|+..- |+.+-....+..-....+.+.++.+
T Consensus 149 -----------------------lp-----wval~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~l~ 197 (293)
T COG2962 149 -----------------------LP-----WVALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLFLA 197 (293)
T ss_pred -----------------------Cc-----HHHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHHHh
Confidence 11 4677778899999887776542 4455555555555666656555555
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHH
Q 017940 238 RNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVII 317 (363)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~ 317 (363)
...+.....+...+..+...|.+ +.++..++..+.++++-+..+.++|.+|..-.+++.+++||+++..+++..+.+-.
T Consensus 198 ~~~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~ 276 (293)
T COG2962 198 DSGQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWL 276 (293)
T ss_pred cCchhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 43321222344567777777875 77999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhheeccc
Q 017940 318 GLYILLWGKN 327 (363)
Q Consensus 318 g~~l~~~~~~ 327 (363)
|+.++....-
T Consensus 277 aL~l~~~d~l 286 (293)
T COG2962 277 ALALFSIDGL 286 (293)
T ss_pred HHHHHHHHHH
Confidence 9999986544
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.90 E-value=1.3e-21 Score=165.67 Aligned_cols=275 Identities=16% Similarity=0.143 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY 88 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (363)
.++.++.++..-=...-+.|.... .+.+..++.+|..++.++++++..-++ .++++++++.....|+. ....|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~~~~~~~yGvs-Lg~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALFRPWR----RRLSKPQRLALLAYGVS-LGGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHhhHHH----hccChhhhHHHHHHHHH-HHHHHH
Confidence 578888888888888888998988 599999999999999999988864332 35788999999999988 689999
Q ss_pred HHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhh
Q 017940 89 FFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETA 168 (363)
Q Consensus 89 ~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 168 (363)
+||.+++.+|.+.+..+..+.|+.+.+++. +| .++ .+.+.+++.|+.++.. .++
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p-~~~------------- 140 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLP-LGQ------------- 140 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhhee-ccC-------------
Confidence 999999999999999999999999877632 22 334 6777788899888874 221
Q ss_pred hhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Q 017940 169 INVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGK 248 (363)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (363)
+.......|..+++.++.||+.|.+..+|..+. .+.-+-....+..+.++.+|+....... ...++
T Consensus 141 ---------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p 206 (292)
T COG5006 141 ---------SVWSLDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP----ALFSP 206 (292)
T ss_pred ---------CcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch----hhcCh
Confidence 122333499999999999999999999999865 3556778888888999998988754321 11233
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940 249 IEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK 328 (363)
Q Consensus 249 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 328 (363)
.....-+..+++++.+.|.+-..++++.++...+.+..++|.++.+.+++++||.+|..||+|+.+++.+..-..+..||
T Consensus 207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~ 286 (292)
T COG5006 207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK 286 (292)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence 45666788999999999999999999999999999999999999999999999999999999999999998877765554
Q ss_pred c
Q 017940 329 E 329 (363)
Q Consensus 329 ~ 329 (363)
+
T Consensus 287 ~ 287 (292)
T COG5006 287 P 287 (292)
T ss_pred C
Confidence 4
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.90 E-value=5.1e-25 Score=187.31 Aligned_cols=291 Identities=19% Similarity=0.172 Sum_probs=223.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
+..+|.++..++ .++.+..+..+..++ .+|....-.|+++-.+..++..++++.... .+....+++++.|++| +
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~ 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-F 108 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-h
Confidence 456788888888 555555555555555 889999999988888888877766443321 2233445678889887 7
Q ss_pred HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhc---CCCccCCC
Q 017940 85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK---GMPLFDHS 161 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~---~~~~~~~~ 161 (363)
.+..+.|+|++|.+.+++.+|..+.|+++.+++|.++|||.++.+ .++..+.+.|++++..+. |++...
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvRPpFlFG~~t~g-- 180 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVRPPFLFGDTTEG-- 180 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEecCCcccCCCccc--
Confidence 777889999999999999999999999999999999999999999 999999999999987421 111100
Q ss_pred cchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCc
Q 017940 162 YSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHS 241 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (363)
++ .++.+....|...++.+.+..|...+..|+..|+. |......+...++.+..+......+. -
T Consensus 181 -----------~~--~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig~--~ 244 (346)
T KOG4510|consen 181 -----------ED--SSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIGA--V 244 (346)
T ss_pred -----------cc--cccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhccc--e
Confidence 00 11124456788889999999999999999998884 55666666666666666555443331 1
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhh
Q 017940 242 AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI 321 (363)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l 321 (363)
++++ ...+|+.+..+|++ ++.++.+...++|+..|..+++..+++.++++++++++|+|.|+++.|+|+++++...+.
T Consensus 245 ~lP~-cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~ 322 (346)
T KOG4510|consen 245 QLPH-CGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW 322 (346)
T ss_pred ecCc-cccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence 2222 44678888888875 668999999999999999999999999999999999999999999999999999999887
Q ss_pred heeccc
Q 017940 322 LLWGKN 327 (363)
Q Consensus 322 ~~~~~~ 327 (363)
....|.
T Consensus 323 ~a~~kw 328 (346)
T KOG4510|consen 323 VALKKW 328 (346)
T ss_pred HHHHHH
Confidence 765443
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=2.9e-21 Score=176.06 Aligned_cols=279 Identities=15% Similarity=0.109 Sum_probs=208.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY 88 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (363)
+++++++++++||...+..|+.. +.++.++. |..++.+++..+....+.. ++.+++.+...++.|++ ...++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLP--EFWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCC--cccccHHHHHHHHHHHH-HHhhhh
Confidence 57899999999999999999764 58887775 6777777766655543221 12235666667777777 689999
Q ss_pred HHHHHhhccCccchhhhcc-hhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhh
Q 017940 89 FFLLGIQYTSATFACAFIN-MVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAET 167 (363)
Q Consensus 89 ~~~~al~~~~~~~~~ii~~-~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~ 167 (363)
+++.+.++++.+.+..+.+ +.++++.+.+.+++||+.++++ ....++|+++++.|++++...++++.+
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~~--------- 143 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSAG--------- 143 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEeccccccc---------
Confidence 9999999999999999987 9999999999999999987653 122267789999998887643321110
Q ss_pred hhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHH---HHHHHHHHHHHHhcCCCcccc
Q 017940 168 AINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSL---FGAIQAAILCLATNRNHSAWS 244 (363)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 244 (363)
.++..+..+|+.++++++++|+.|.+..|+.. .+|....+.+.. .++++..+.. .++ .++
T Consensus 144 ---------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~- 206 (290)
T TIGR00776 144 ---------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGMVIGGIIFNLGH---ILA-KPL- 206 (290)
T ss_pred ---------cccccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHHHHHHHHHHHHH---hcc-cch-
Confidence 00012335799999999999999999999863 366777444444 3333222221 111 112
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcc-cCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHh
Q 017940 245 FKGKIEIISVLYAGIVGSGLCYVGLTWCVK-KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGL 319 (363)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~-~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~ 319 (363)
.+...+..++ .|++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.++++++++|+.++.++ +|.++++.|+
T Consensus 207 -~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~ 283 (290)
T TIGR00776 207 -KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAA 283 (290)
T ss_pred -HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHH
Confidence 1223344444 8887 6899999999999 99999999999999999999999999999999999 9999999999
Q ss_pred hhheec
Q 017940 320 YILLWG 325 (363)
Q Consensus 320 ~l~~~~ 325 (363)
.+....
T Consensus 284 ~l~~~~ 289 (290)
T TIGR00776 284 NILGIG 289 (290)
T ss_pred HHHhcc
Confidence 887543
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.85 E-value=4.6e-19 Score=163.00 Aligned_cols=267 Identities=15% Similarity=0.135 Sum_probs=211.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHH
Q 017940 36 NELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFV 115 (363)
Q Consensus 36 ~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~l 115 (363)
.|..+++.++....+...+.....+++ +.++..++.....+++ ..++..+.+.|++|+|.+...++.++.|+.+++
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi 106 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFL-FFLASVLSNAALKYISYPTQIVFKSSKPIPVMI 106 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHH-HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence 388999999999988887776554312 2334456666777777 588889999999999999999999999999999
Q ss_pred HHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHH
Q 017940 116 IALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTL 195 (363)
Q Consensus 116 la~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 195 (363)
++.+++|+|.+.++ ++++++..+|+++....+..+.+. .++...++..|+++.+++.+
T Consensus 107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~----------------~~~~~~~~~~G~~ll~~sl~ 164 (303)
T PF08449_consen 107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSS----------------SNSSSFSSALGIILLLLSLL 164 (303)
T ss_pred HHHHhcCccccHHH------HHHHHHHHhhHheeeecccccccc----------------cccccccchhHHHHHHHHHH
Confidence 99999999999999 999999999999998754332210 01122223359999999999
Q ss_pred HHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHH--hcCCCcc--cccccchhHHHHHHHHHHHHHHHHHHhh
Q 017940 196 LWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLA--TNRNHSA--WSFKGKIEIISVLYAGIVGSGLCYVGLT 270 (363)
Q Consensus 196 ~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 270 (363)
+.|...+.+++..+++. ++.+.+++.+.++.+...+.... .++.... .....+..+..++...+ ++.+++...+
T Consensus 165 ~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~ 243 (303)
T PF08449_consen 165 LDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIF 243 (303)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999999999986544 67899999999999988887776 3321111 11122334444444443 5667788888
Q ss_pred hhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccccc
Q 017940 271 WCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE 329 (363)
Q Consensus 271 ~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 329 (363)
...++.++...+++..+..+++++++++++++++++.+|+|+++++.|..++.+.++|+
T Consensus 244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 89999999999999999999999999999999999999999999999999999877665
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.82 E-value=3.1e-19 Score=159.38 Aligned_cols=232 Identities=13% Similarity=0.149 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 72 LFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 72 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
-+..+....+ -++.++.+..|+.+++++..+++.++.-+|+..++.++..||+++.+ ++++.+++.|++++..
T Consensus 159 ak~sl~fc~l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~ 231 (416)
T KOG2765|consen 159 AKLSLFFCPL-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTM 231 (416)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEe
Confidence 3444555666 58899999999999999999999999999999999999999999999 9999999999999987
Q ss_pred hcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHH---HHHHHHHHH
Q 017940 152 YKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA---ILSLFGAIQ 228 (363)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~---~~~~~~~~~ 228 (363)
++..+.+ +..+.+...|+++++++++.||.|.++.||...+..+...+.. +..++..++
T Consensus 232 ~~s~~~~------------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnlll 293 (416)
T KOG2765|consen 232 GDSKQNS------------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLL 293 (416)
T ss_pred ccccccc------------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHH
Confidence 5432211 2235556799999999999999999999998876432233322 334455556
Q ss_pred HHHHHHHhcC-CCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchh
Q 017940 229 AAILCLATNR-NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIG 307 (363)
Q Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~ 307 (363)
++|..++... ..+.+..++..+...+++.++++++++-.+|.+|.-.+++..+++-+.++...+++.+.++-+..+++.
T Consensus 294 lwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~ 373 (416)
T KOG2765|consen 294 LWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL 373 (416)
T ss_pred HhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH
Confidence 6665554432 333455556667777888889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhheecccc
Q 017940 308 SLLGSITVIIGLYILLWGKNK 328 (363)
Q Consensus 308 ~~~G~~li~~g~~l~~~~~~~ 328 (363)
+++|.+.|++|.+++++....
T Consensus 374 ~iiGsi~Ifv~Fv~vn~~~~~ 394 (416)
T KOG2765|consen 374 YIIGSIPIFVGFVIVNISSEN 394 (416)
T ss_pred HHHHHHHHHHHHhheeccccc
Confidence 999999999999999876543
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.77 E-value=2e-18 Score=155.76 Aligned_cols=273 Identities=13% Similarity=0.090 Sum_probs=216.0
Q ss_pred HHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Q 017940 24 NIFLKKVLEE-GMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATF 101 (363)
Q Consensus 24 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 101 (363)
.+..|+.++. +.+ |..++.++..++.+..+.....+.....+..++..+...+.+|++ .+++..+-+.++++++++.
T Consensus 33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v~VsF 111 (316)
T KOG1441|consen 33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV-FCISHVLGNVSLSYVPVSF 111 (316)
T ss_pred EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH-HHHHHHhcchhhhccchhH
Confidence 3566777762 233 888888888888777776665543333332345678888889988 5999999999999999999
Q ss_pred hhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCc
Q 017940 102 ACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTE 181 (363)
Q Consensus 102 ~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (363)
++.+..+.|++++++++++.+|+.+... +..++..+.|+.+.+..+ ..
T Consensus 112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e--------------------------~~ 159 (316)
T KOG1441|consen 112 YQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTE--------------------------LS 159 (316)
T ss_pred HHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeecc--------------------------cc
Confidence 9999999999999999999999999999 999999999999998622 22
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhcc---CCCchhHHHHHHHHHHHHHH-HHHHHhcCCCc---ccccccchhHHHH
Q 017940 182 RWTFGTIALTVGTLLWASWFPIQSYIGKR---YPCKYSSTAILSLFGAIQAA-ILCLATNRNHS---AWSFKGKIEIISV 254 (363)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~ 254 (363)
-+..|.+.++.+.+..+..+++.|+..++ .-|+.+...+...++.+.++ |.....+++.. .....+ ......
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~-~~~~~~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF-VTFLIL 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc-hhhHHH
Confidence 23499999999999999999999999842 23789999999999999999 77776665433 110001 112233
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccch
Q 017940 255 LYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ 331 (363)
Q Consensus 255 ~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~ 331 (363)
.+.. ++........+..+.+++|.+.++.....-++.++.++++|+++.++.+..|.++.++|++++++.|.++++
T Consensus 239 ~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 239 LLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 3333 334455566678999999999999999999999999999999999999999999999999999988876543
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.71 E-value=9.8e-17 Score=122.00 Aligned_cols=135 Identities=18% Similarity=0.234 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCC-CcCCHHHHHHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSR-PKLTLRILFCLFFSAIVGTSLT 86 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~ 86 (363)
..++++++++++||...++.|...+ ++||...+++|..+..+++..+....++... ...+.|.|.++.+.|+.+ .++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence 5789999999999999999999999 7999999999999999999888877644322 225889999999999775 999
Q ss_pred HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940 87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 150 (363)
Q Consensus 87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~ 150 (363)
+.+||.|++...++.+..+-.+.|+++.+++++++|||++.++ |+|+.+..+|+.+++
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999 999999999998875
No 22
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.70 E-value=1.2e-17 Score=141.66 Aligned_cols=285 Identities=16% Similarity=0.135 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT 86 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (363)
+++.+.=+-.++-......+....+.+++ |...+|+.+..-+++..++..+++ + .-...|+..++.+++. +-+
T Consensus 18 i~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~---~~~~~~~hYilla~~D-VEa 91 (336)
T KOG2766|consen 18 IGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--K---YIKAKWRHYILLAFVD-VEA 91 (336)
T ss_pred heeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--H---HHHHHHHHhhheeEEe-ecc
Confidence 33333333344444445555555554555 888899999999999998888753 2 2234466688888885 778
Q ss_pred HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhh
Q 017940 87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAE 166 (363)
Q Consensus 87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~ 166 (363)
|++...|.||++...+.++-......+.+++|+++|.|.++.+ +.|+++|+.|+.++...|--. +.
T Consensus 92 Ny~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a-gd------- 157 (336)
T KOG2766|consen 92 NYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA-GD------- 157 (336)
T ss_pred cEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc-cc-------
Confidence 8889999999999999999999889999999999999999999 999999999999998654211 10
Q ss_pred hhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 017940 167 TAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFK 246 (363)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (363)
+.+..+..+|+.+.++++-+||+.++..+.+.|+ .|..+.+....+++++++..-.++.........+
T Consensus 158 ----------~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w- 225 (336)
T KOG2766|consen 158 ----------RAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQFIFERHHVSTLHW- 225 (336)
T ss_pred ----------ccCCCCCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhhhccceeeEee-
Confidence 3345667799999999999999999999999999 4778899999999999988874443222222211
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 247 GKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
.......+. ..++.++-|.+....+|..+++..++-..+.-.++.++ -.||-+.++...+....+..|.+++..+.
T Consensus 226 -~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 226 -DSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred -hHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence 111222222 33456667777778899999999999999999999998 56888899999999999999999996544
Q ss_pred cc
Q 017940 327 NK 328 (363)
Q Consensus 327 ~~ 328 (363)
+.
T Consensus 302 ~~ 303 (336)
T KOG2766|consen 302 KD 303 (336)
T ss_pred cC
Confidence 43
No 23
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.69 E-value=1.1e-15 Score=128.40 Aligned_cols=269 Identities=13% Similarity=0.087 Sum_probs=205.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHH
Q 017940 37 ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVI 116 (363)
Q Consensus 37 ~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~ll 116 (363)
...++|+++....++.-++..++++. +.|+-.-+.....+ ..+.+.+...+.|+||+|-....+-.++-|+=++++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACS-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHH-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 56777888888877776555543322 23333333333333 336677777789999999999888899999999999
Q ss_pred HHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHH
Q 017940 117 ALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLL 196 (363)
Q Consensus 117 a~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 196 (363)
++++.|.+.++++ ...+++++.|+++..+.++... +-.+.....|.++.+++-..
T Consensus 129 GVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~-------------------g~e~~t~g~GElLL~lSL~m 183 (337)
T KOG1580|consen 129 GVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVG-------------------GAEDKTFGFGELLLILSLAM 183 (337)
T ss_pred ehhhhcccccHHH------HHHHHHHHHHHHHhhccccccC-------------------CCcccccchHHHHHHHHHHh
Confidence 9999999999999 9999999999999997543322 22345556899999999999
Q ss_pred HHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc--cccccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 017940 197 WASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSA--WSFKGKIEIISVLYAGIVGSGLCYVGLTWCV 273 (363)
Q Consensus 197 ~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 273 (363)
-+.....+.|..+++. ..-..+++.++.+.+.+....++.++-+.. +..-.+..|+.+..+++ ++.+++++.+.-+
T Consensus 184 DGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv 262 (337)
T KOG1580|consen 184 DGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTV 262 (337)
T ss_pred cccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHH
Confidence 9999988888876543 446778888888888777776665542221 11223456777777776 5789999999999
Q ss_pred ccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccchhccc
Q 017940 274 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVS 335 (363)
Q Consensus 274 ~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~~~ 335 (363)
...+|..-+++..+.-+++++.++++++.+++.+||+|..+++.|...=....++......+
T Consensus 263 ~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~~t~ak 324 (337)
T KOG1580|consen 263 EEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAPMTAAK 324 (337)
T ss_pred HHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCcccccc
Confidence 99999999999999999999999999999999999999999999988766555444333333
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=2.5e-13 Score=122.04 Aligned_cols=299 Identities=12% Similarity=0.079 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhccC---CC-Cc------CCHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEG---MNELVFITCRLLVATILLAPIGYFWERN---SR-PK------LTLRILFC 74 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~i~l~~~~~~~~~~---~~-~~------~~~~~~~~ 74 (363)
.-.+.++...+.++......|+.-..+ +.|.+.+++--..-.++.....+...+. +. +. ..+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 567778888899999999999876654 5577777777776666666665554211 11 11 13445566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcC
Q 017940 75 LFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKG 154 (363)
Q Consensus 75 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~ 154 (363)
..+-+++ +.+.|.+++.++.+.+++..++..++-.+.|+++..+++|+|++++| |.++++.+.|+.++..+..
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence 6666777 78889999999999999999999999999999999999999999999 9999999999999984322
Q ss_pred CCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhH-HHHHHHHHHHHHHHHH
Q 017940 155 MPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSS-TAILSLFGAIQAAILC 233 (363)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (363)
...+. +......+...|....+.++.+-+...++.++..|+...+... +....+++.++.+...
T Consensus 168 ~~~~a---------------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~ 232 (345)
T KOG2234|consen 168 SPTGA---------------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTI 232 (345)
T ss_pred CCCCc---------------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 21110 0022356667999999999999999999999999874433333 3333444444444433
Q ss_pred HHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHH
Q 017940 234 LATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSI 313 (363)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~ 313 (363)
+..+.+...+.- --..|-...+.-++..+++-.+...-+|+.+-..=+....+..+++.+.++.+++-++|....+|..
T Consensus 233 ~~~d~~~i~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~ 311 (345)
T KOG2234|consen 233 LLQDGEAINEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGAL 311 (345)
T ss_pred hhccccccccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 333222211110 0011222222223344455555556678888777778888899999999999999999999999999
Q ss_pred HHHHHhhhheeccccc
Q 017940 314 TVIIGLYILLWGKNKE 329 (363)
Q Consensus 314 li~~g~~l~~~~~~~~ 329 (363)
+++..+.++...+.++
T Consensus 312 lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 312 LVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHhhcCCccc
Confidence 9999999999555544
No 25
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.61 E-value=3.5e-14 Score=124.11 Aligned_cols=265 Identities=12% Similarity=0.130 Sum_probs=210.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHH
Q 017940 36 NELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFV 115 (363)
Q Consensus 36 ~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~l 115 (363)
++..+.+.+.+++.++-..+..++..+ ....+.|......++.+ .++..|.+.|++|++--...+-.++-.+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 488889999999988886665443322 22344466666677664 78888999999999999988888888888889
Q ss_pred HHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHH
Q 017940 116 IALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTL 195 (363)
Q Consensus 116 la~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 195 (363)
.+.++.|.|.+..+ .+...++-.|+.+.+..+..+.. .+.++++...|+.+....-+
T Consensus 126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~s~-----------------~~~g~~ns~~G~~Ll~~~L~ 182 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSDSS-----------------SKSGRENSPIGILLLFGYLL 182 (327)
T ss_pred HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCCCc-----------------cccCCCCchHhHHHHHHHHH
Confidence 99999999999999 99999999999988765433211 14455677799999999999
Q ss_pred HHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCc--ccccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 017940 196 LWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHS--AWSFKGKIEIISVLYAGIVGSGLCYVGLTWC 272 (363)
Q Consensus 196 ~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 272 (363)
.-+..+..++++.++.. +++.++++.+++..+......+..+...+ .+...++..+.-++.... ++.+++.+.++-
T Consensus 183 fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~T 261 (327)
T KOG1581|consen 183 FDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYT 261 (327)
T ss_pred HHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhh
Confidence 99999999999987643 77899999999999888776443333222 222224455666666665 456899999999
Q ss_pred cccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940 273 VKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK 328 (363)
Q Consensus 273 ~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 328 (363)
+++-++...+.++.+.-+++++++.+.++.+++..||+|..+++.|+.+-..-++|
T Consensus 262 I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 262 IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988766655
No 26
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.60 E-value=3.4e-13 Score=119.46 Aligned_cols=285 Identities=13% Similarity=0.133 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHH--HHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMN-ELVF--ITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~--~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
.....++.-++.--...+..|..+.. .+ |..+ ...+.+.+.+.+...-..+.- +.++++++..+..+...++ +.
T Consensus 12 ~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-~~~~l~~~~~kk~~P~~~l-f~ 88 (314)
T KOG1444|consen 12 SPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLGLV-NFRPLDLRTAKKWFPVSLL-FV 88 (314)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhcee-ecCCcChHHHHHHccHHHH-HH
Confidence 34555555555556666777877763 33 4444 448888888777655433222 3455889999999999988 57
Q ss_pred HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940 85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ 164 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~ 164 (363)
+....-..+++|++....+++.+..|+++++.+.+++|.|++... +.++...++|.......+
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d----------- 151 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTD----------- 151 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcccc-----------
Confidence 888888899999999999999999999999999999998888887 888888888877665422
Q ss_pred hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcC-C---
Q 017940 165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNR-N--- 239 (363)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 239 (363)
..-...|+.|++...++-+.+.+..|+..+... +.+..+++.++.+........++.++ +
T Consensus 152 ---------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~ 216 (314)
T KOG1444|consen 152 ---------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS 216 (314)
T ss_pred ---------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH
Confidence 111225899999999999999999999876532 45778899999998888887777654 1
Q ss_pred --CcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHH
Q 017940 240 --HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVII 317 (363)
Q Consensus 240 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~ 317 (363)
.+.+. ....+..+...++++.++.|..+ ++.+..++...+++...+-..+.+.+.++.|++.++...+|..+-++
T Consensus 217 ~~~~~~~--~~~~~~~~~lScv~gf~isy~s~-~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ 293 (314)
T KOG1444|consen 217 LNFDNWS--DSSVLVVMLLSCVMGFGISYTSF-LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFF 293 (314)
T ss_pred hhccccc--chhHHHHHHHHHHHHHHHHHHHH-HHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhh
Confidence 11121 23346667777777666666655 78999999999999988888888888888899999999999999999
Q ss_pred Hhhhheecccccc
Q 017940 318 GLYILLWGKNKEM 330 (363)
Q Consensus 318 g~~l~~~~~~~~~ 330 (363)
|-+++++.+.+++
T Consensus 294 ggv~Y~~~~~~~k 306 (314)
T KOG1444|consen 294 GGVLYSYATFRKK 306 (314)
T ss_pred hhhHHhhhhhhhc
Confidence 9999998775543
No 27
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.59 E-value=1e-13 Score=122.57 Aligned_cols=231 Identities=13% Similarity=0.114 Sum_probs=169.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhH
Q 017940 67 LTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGA 146 (363)
Q Consensus 67 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv 146 (363)
.++++...+.+-+++ +.+.+.+.+.++++++++..+++.++..+++++++++++|+|++.+| |.++.+.+.|+
T Consensus 12 ~~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv 84 (244)
T PF04142_consen 12 KSPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGV 84 (244)
T ss_pred HhHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHH
Confidence 356778888888888 79999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHH
Q 017940 147 MLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFG 225 (363)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~ 225 (363)
.++........+.++ ....+++....+...|.+..++++++-+...++.++..|+.. +.+..+......+
T Consensus 85 ~lv~~~~~~~~~~~~---------~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~g 155 (244)
T PF04142_consen 85 VLVQLSSSQSSDNSS---------SSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFG 155 (244)
T ss_pred heeecCCcccccccc---------ccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 998754322211000 000000112344578999999999999999999999998854 3344455555566
Q ss_pred HHHHHHHHHHhcCCC-cccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCC
Q 017940 226 AIQAAILCLATNRNH-SAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERL 304 (363)
Q Consensus 226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~ 304 (363)
.+..++.....+.+. .+.... ..+-...+.-++...++-.+....+|+.+...=+....+..+++.++++++|+.++
T Consensus 156 i~~~~~~~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~ 233 (244)
T PF04142_consen 156 ILFNLLALLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPP 233 (244)
T ss_pred HHHHHHHHhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 655555544332211 111100 11111222333445556666777899999999999999999999999999999999
Q ss_pred chhhHHHHHHH
Q 017940 305 HIGSLLGSITV 315 (363)
Q Consensus 305 ~~~~~~G~~li 315 (363)
+....+|+.++
T Consensus 234 s~~f~lg~~~V 244 (244)
T PF04142_consen 234 SLSFLLGAALV 244 (244)
T ss_pred chHHhhheecC
Confidence 99999998753
No 28
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.57 E-value=6.3e-13 Score=116.23 Aligned_cols=256 Identities=16% Similarity=0.160 Sum_probs=186.7
Q ss_pred CC-hHHHHHHHHHHHHHHHHHHHHhhccCC---CCcCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchh
Q 017940 35 MN-ELVFITCRLLVATILLAPIGYFWERNS---RPKLTLRILF-CLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMV 109 (363)
Q Consensus 35 ~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~---~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~ 109 (363)
++ |+.++.++.++-..+....-...+++. +...+|++.. +....|+. .+....+-+.+++|++.+..++..+..
T Consensus 42 f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSs 120 (349)
T KOG1443|consen 42 FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSS 120 (349)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccH
Confidence 44 888888887777666655544433322 2346777754 45566666 488888889999999999999999999
Q ss_pred hHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHH
Q 017940 110 PVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIA 189 (363)
Q Consensus 110 pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 189 (363)
++|+.+++.+|.-||+++.- ..-+.++.+|++++.+ +. ++-...|..+
T Consensus 121 i~FIllFs~if~lEk~~w~L------~l~v~lI~~Glflft~-Ks-------------------------Tqf~i~Gf~l 168 (349)
T KOG1443|consen 121 ILFILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTY-KS-------------------------TQFNIEGFFL 168 (349)
T ss_pred HHHHHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEe-cc-------------------------cceeehhHHH
Confidence 99999999999999999876 6666677777877775 22 2233488888
Q ss_pred HHHHHHHHHHHHHHHHhhhccC----CCchhHHHHHHHHHHHHHHHHHHHhcCCCcc-----cccccc-hhHHHH---HH
Q 017940 190 LTVGTLLWASWFPIQSYIGKRY----PCKYSSTAILSLFGAIQAAILCLATNRNHSA-----WSFKGK-IEIISV---LY 256 (363)
Q Consensus 190 ~l~a~~~~a~~~i~~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~---~~ 256 (363)
..+++.+-++--...+.+.++. ++|....+.......+.++|..+..|+.... +...+. ..+..+ ..
T Consensus 169 v~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l 248 (349)
T KOG1443|consen 169 VLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL 248 (349)
T ss_pred HHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH
Confidence 8888888777776666665542 3788888888888888888888887763222 111111 122222 22
Q ss_pred HHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940 257 AGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 257 ~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 324 (363)
.|.++....+. -+..+.+++....++.....-+.+.+++.++.+|.++...|+|..+...|+.+..+
T Consensus 249 ~g~laF~l~~s-EflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 249 GGLLAFLLEFS-EFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHH-HHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 23322222222 23567888999999999999999999999999999999999999999999999844
No 29
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.55 E-value=1.7e-14 Score=114.61 Aligned_cols=125 Identities=25% Similarity=0.442 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017940 18 FGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYT 97 (363)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 97 (363)
++||...++.|...+ +.||...+++|+..+.+ ++++....+++...+.+++++......|+++...++.+++.+++++
T Consensus 1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 479999999999988 49999999999999998 6666655555444567888899999999887799999999999999
Q ss_pred CccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940 98 SATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 150 (363)
Q Consensus 98 ~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~ 150 (363)
+++.++++.++.|+++.+++++++||++++++ ++|+++++.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999998875
No 30
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.54 E-value=3.1e-14 Score=122.31 Aligned_cols=267 Identities=16% Similarity=0.095 Sum_probs=202.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC----C--CcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhh
Q 017940 37 ELVFITCRLLVATILLAPIGYFWERNS----R--PKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVP 110 (363)
Q Consensus 37 ~~~~~~~r~~~~~i~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~p 110 (363)
|..+++.++++...+...+.....+-. . .++|.+..+...-..++ ..+...+-+.+++|++.+...+=.++..
T Consensus 61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsLtt 139 (347)
T KOG1442|consen 61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSLTT 139 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccchhh
Confidence 888999999888777666554432211 1 12455555555555555 3555566679999999999999999999
Q ss_pred HHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHH
Q 017940 111 VITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIAL 190 (363)
Q Consensus 111 v~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 190 (363)
+|++++..+++|+|-+..- ..++.+++.|..+=...++ .. +.-...|.+++
T Consensus 140 vFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvdqE~----------------------~~-~~ls~~GvifG 190 (347)
T KOG1442|consen 140 VFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVDQEG----------------------ST-GTLSWIGVIFG 190 (347)
T ss_pred hHHHHhHHhhccccccccc------ceeehhheehheecccccc----------------------cc-CccchhhhHHH
Confidence 9999999999999999887 8888888777766543222 11 22334899999
Q ss_pred HHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cc-cchhHHHHHHHHHHHHHHHH
Q 017940 191 TVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWS--FK-GKIEIISVLYAGIVGSGLCY 266 (363)
Q Consensus 191 l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~ 266 (363)
+.++++-|+..+..|+...... .-+.++++.+..+.++++|...+.++-...+. .. ....|..+...|+++..++|
T Consensus 191 VlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy 270 (347)
T KOG1442|consen 191 VLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY 270 (347)
T ss_pred HHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999998765433 45778899999999999999988765212121 21 33456666667776655555
Q ss_pred HHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccchhcc
Q 017940 267 VGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCV 334 (363)
Q Consensus 267 ~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~~ 334 (363)
.. .+-+|.++|.+.++-..-.-....+++..+++|.-+..-|-|-+++++|...+++.|.++++++.
T Consensus 271 vT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~ 337 (347)
T KOG1442|consen 271 VT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS 337 (347)
T ss_pred ee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence 53 36689999999999999999999999999999999999999999999999999998877665543
No 31
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.51 E-value=3.5e-13 Score=102.78 Aligned_cols=136 Identities=18% Similarity=0.168 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHH
Q 017940 186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 265 (363)
Q Consensus 186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 265 (363)
-.++++++++++++..+..|--.++ .||...+..+.....+.+.......++ .......++..|..+...| ++++.+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSG-la~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSG-LAGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHH-HHHHHH
Confidence 3589999999999999999998887 478889999999888887777766554 2211112556777777777 578899
Q ss_pred HHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940 266 YVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 266 ~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 324 (363)
..+|++|++...++++.++.-+.|+++++++++++||+++..+++|+.++.+|.+++.+
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999988754
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.44 E-value=6.1e-13 Score=105.66 Aligned_cols=125 Identities=22% Similarity=0.328 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 017940 195 LLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVK 274 (363)
Q Consensus 195 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~ 274 (363)
++||.+.+..|+..++ .||.....+++..+.+ .++.....++.. ....+...+...++.+++++..++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 4789999999999998 5789999999999998 666666655432 12224456777888888888999999999999
Q ss_pred cCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940 275 KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 275 ~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 323 (363)
+.+++.++++..++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998764
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.39 E-value=2.2e-10 Score=101.12 Aligned_cols=254 Identities=15% Similarity=0.112 Sum_probs=175.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhc-chhhHHH
Q 017940 35 MNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFI-NMVPVIT 113 (363)
Q Consensus 35 ~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pv~~ 113 (363)
-+|..-.+---.-+.++-+....+. +... ..+.+.+...++.|++ ..+++.+.+.++++.+.+.+..+. .++-+.+
T Consensus 10 G~~~~Q~lG~t~Gali~alv~~~~~-~p~~-~~~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~ 86 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFALVVFLFR-QPAF-SMSGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGT 86 (269)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHh-CCCc-chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHH
Confidence 3444444443344444444443332 2211 1234889999999998 599999999999999999999995 6999999
Q ss_pred HHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHH
Q 017940 114 FVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVG 193 (363)
Q Consensus 114 ~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a 193 (363)
.+++.++++|.-+..+ ...-.+++++.++|+.+.+..+.++.. .+++.+...|....+++
T Consensus 87 sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts~~~~~~~~------------------~~~~~~~~kgi~~Ll~s 146 (269)
T PF06800_consen 87 SLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTSYQDKKSDK------------------SSSKSNMKKGILALLIS 146 (269)
T ss_pred HHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhccccccccc------------------cccccchhhHHHHHHHH
Confidence 9999999999877665 000123677888899888875433221 12245567899999999
Q ss_pred HHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 017940 194 TLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCV 273 (363)
Q Consensus 194 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 273 (363)
.+.|..|.+..|... .+++....-+.....+....+....++ ..+ .+..|.. +..|++ -.++.+++..+.
T Consensus 147 tigy~~Y~~~~~~~~---~~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~---~k~~~~n-il~G~~-w~ignl~~~is~ 216 (269)
T PF06800_consen 147 TIGYWIYSVIPKAFH---VSGWSAFLPQAIGMLIGAFIFNLFSKK--PFF---EKKSWKN-ILTGLI-WGIGNLFYLISA 216 (269)
T ss_pred HHHHHHHHHHHHhcC---CChhHhHHHHHHHHHHHHHHHhhcccc--ccc---ccchHHh-hHHHHH-HHHHHHHHHHhH
Confidence 999999999977633 256666665555444444333333311 111 2223433 334443 356888888999
Q ss_pred ccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHhhh
Q 017940 274 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGLYI 321 (363)
Q Consensus 274 ~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~l 321 (363)
++.+.+..=.+..+.++++.+.+.+++||+=+.+++ +|.+++++|.++
T Consensus 217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999876654 588888888664
No 34
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.33 E-value=2.7e-11 Score=101.30 Aligned_cols=276 Identities=14% Similarity=0.135 Sum_probs=195.1
Q ss_pred HHHHHHhh-cCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccch
Q 017940 25 IFLKKVLE-EGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFA 102 (363)
Q Consensus 25 ~~~k~~~~-~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~ 102 (363)
+..|+.+. .|.+ -+.+++.+.+++.+.+..+-..+.-+ .+..+.+..+...++ .....+.--.+++|++....
T Consensus 23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~----fR~t~aK~WfpiSfL-Lv~MIyt~SKsLqyL~vpiY 97 (309)
T COG5070 23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE----FRLTKAKKWFPISFL-LVVMIYTSSKSLQYLAVPIY 97 (309)
T ss_pred HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh----eehhhhhhhcCHHHH-HHHHHHhcccceeeeeeeHH
Confidence 34455443 1333 46677888888877766554332111 112223333444444 34555556799999999999
Q ss_pred hhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCcc
Q 017940 103 CAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTER 182 (363)
Q Consensus 103 ~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (363)
+++.++..+.++....++++.|++... ..+.++.+..-....+.|.+.. .-....
T Consensus 98 TiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~-------------------~~~~~~ 152 (309)
T COG5070 98 TIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQAS-------------------AFKAQI 152 (309)
T ss_pred HHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHH-------------------HHHhcc
Confidence 999999999999999999999999888 7777776666666655332211 111234
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc-ccc-ccchhHHHHHHHHH
Q 017940 183 WTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSA-WSF-KGKIEIISVLYAGI 259 (363)
Q Consensus 183 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~ 259 (363)
.+.|++|....++.-+.+....|+..+-.. .....++|.++.+..+++.+.+..|+..+. ... .+.....++...|+
T Consensus 153 lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl 232 (309)
T COG5070 153 LNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL 232 (309)
T ss_pred cCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH
Confidence 458999999999999999999888765311 237889999999999999988887652111 111 12223445666666
Q ss_pred HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccch
Q 017940 260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ 331 (363)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~ 331 (363)
.+.+.+| +-.|.++.++.+..+++..++-.-..+.|.++++|+.+...+..+.+-.....++...+.++++
T Consensus 233 ~svgiSy-~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 233 CSVGISY-CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred HHhhhhh-ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5544444 4668999999999999999999999999999999999999999999999888888776655433
No 35
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.32 E-value=3.9e-11 Score=103.72 Aligned_cols=279 Identities=14% Similarity=0.142 Sum_probs=190.4
Q ss_pred HHHHHHHHHHhh---cCCC----hHHHHHHHHHHHHHHHHHHHHhhccCCCCcC-------------CHHHHHHHHHHHH
Q 017940 21 ATVNIFLKKVLE---EGMN----ELVFITCRLLVATILLAPIGYFWERNSRPKL-------------TLRILFCLFFSAI 80 (363)
Q Consensus 21 ~~~~~~~k~~~~---~~~~----~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g~ 80 (363)
..+.+..|++=+ +|.+ |+..+..-++.-+.++..+.+++.+...+.. +.+ -...+.-.+
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pal 94 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPAL 94 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChHH
Confidence 345566666421 2333 6777666677666777766666544211100 111 112233556
Q ss_pred HHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCC
Q 017940 81 VGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDH 160 (363)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~ 160 (363)
+. ..+..+.|.|+.+++++.-+.+.....+|+.+++.-+++.+++.+| |+|+.....|+.++...+--.
T Consensus 95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~---- 163 (372)
T KOG3912|consen 95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHL---- 163 (372)
T ss_pred HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeeccc----
Confidence 64 6778889999999999999999999999999999999999999999 999999999999886532110
Q ss_pred CcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccC-CCchhHHHHHHHHHHHHHHHHHHHhcC-
Q 017940 161 SYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRY-PCKYSSTAILSLFGAIQAAILCLATNR- 238 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (363)
.++|...-.+...|+++.+.|-+.-|+..++.+|..++. .+|.....|..+++.++...+......
T Consensus 164 ------------~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi 231 (372)
T KOG3912|consen 164 ------------VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYI 231 (372)
T ss_pred ------------ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhhe
Confidence 111233345667899999999999999999988877653 389999999999986655544443211
Q ss_pred C-Ccccccccc---hhHHH---------HHHHHHHHHHHHHHHhhh----hcccCCcchhhhhhhhHHHHHHHHHHHHhC
Q 017940 239 N-HSAWSFKGK---IEIIS---------VLYAGIVGSGLCYVGLTW----CVKKKGPVFTAAFSPLVQIMAAMFDIPLLH 301 (363)
Q Consensus 239 ~-~~~~~~~~~---~~~~~---------~~~~g~~~~~~~~~~~~~----a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~ 301 (363)
+ ...+...+. .+|.. .+++...+...+..+++. -.|..++++-.++-.+...+-.+++.....
T Consensus 232 ~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~ 311 (372)
T KOG3912|consen 232 PSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGW 311 (372)
T ss_pred ecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHH
Confidence 0 000111011 11111 112222223333334432 356677888888888899999999999999
Q ss_pred CCCchhhHHHHHHHHHHhhhhe
Q 017940 302 ERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 302 e~~~~~~~~G~~li~~g~~l~~ 323 (363)
|.++..|+.|.++.+.|+.+++
T Consensus 312 E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 312 EYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997
No 36
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.32 E-value=3.9e-11 Score=108.00 Aligned_cols=133 Identities=20% Similarity=0.355 Sum_probs=114.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh--HHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHH
Q 017940 6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNE--LVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGT 83 (363)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 83 (363)
...|.+++++++++|+...+..|+..+ +.++ .....+++.++.++++++....++. +..+.+++...+..++++.
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT 202 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence 457999999999999999999999876 4664 4555578999998888887654322 2346778888888898888
Q ss_pred HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHH
Q 017940 84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 147 (363)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~ 147 (363)
..++.++++++++.+++.++++.++.|+++.++++++++|+++..+ ++|+.+.+.|++
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~ 260 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999 999999988863
No 37
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.30 E-value=1.9e-09 Score=99.01 Aligned_cols=300 Identities=13% Similarity=0.110 Sum_probs=182.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHH-HHHHHHHHHH-HHHHhhccC---CCCcCCHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITC-RLLVATILLA-PIGYFWERN---SRPKLTLRILFCLFFSA 79 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~i~l~-~~~~~~~~~---~~~~~~~~~~~~~~~~g 79 (363)
+...|++..+++.++||+.++-.|+ .+ ..+.-.+ +. -..++.++.- ....+..+. .....+.+.+...++.|
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k-~w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VK-KWSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cC-CCchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 5678999999999999999999998 34 3442111 11 1111111111 001110010 11225678888899999
Q ss_pred HHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCcccc---ccccccCccceehhhHHHHhHHHhhhhcCC
Q 017940 80 IVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETV---DIKGISGKAKVVGTLVCIGGAMLLTLYKGM 155 (363)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~---~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~ 155 (363)
++ -.+++.+++.++++.+.+.+..+ ..++-+...++..++++|-. +..+ ...-.+|++++++|+.+.......
T Consensus 81 ~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~ 157 (345)
T PRK13499 81 AL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL 157 (345)
T ss_pred HH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence 98 59999999999999999999777 57999999999999998754 2221 112377889999999998873322
Q ss_pred CccCCCcchhhhhhhhhcCCCC-CCCccchhhHHHHHHHHHHHHHHH-------HHHHhhhccCCCchhHHHHHHH---H
Q 017940 156 PLFDHSYSQAETAINVMHMHPT-RKTERWTFGTIALTVGTLLWASWF-------PIQSYIGKRYPCKYSSTAILSL---F 224 (363)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~l~a~~~~a~~~-------i~~k~~~~~~~~~~~~~~~~~~---~ 224 (363)
.... ++.+ +++.+..+|+++++++.+.++.|. ...+...+...++......+.. .
T Consensus 158 k~~~--------------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~ 223 (345)
T PRK13499 158 KERK--------------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMG 223 (345)
T ss_pred cccc--------------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHH
Confidence 1110 0000 234567799999999999999999 3333321121244443333333 3
Q ss_pred HHHHHHH-HHHHh-cCCCc--ccccc--cchhHHHH----HHHHHHHHHHHHHHhhhhcccCCcchhhh---h-hhhHHH
Q 017940 225 GAIQAAI-LCLAT-NRNHS--AWSFK--GKIEIISV----LYAGIVGSGLCYVGLTWCVKKKGPVFTAA---F-SPLVQI 290 (363)
Q Consensus 225 ~~~~~~~-~~~~~-~~~~~--~~~~~--~~~~~~~~----~~~g~~~~~~~~~~~~~a~~~~~a~~~s~---~-~~~~pv 290 (363)
+..+.-. ...+. .++.. ..... +...+..- ...|+ .=.++++++..+.++.+...... + +.+..+
T Consensus 224 G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vi 302 (345)
T PRK13499 224 GGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVL 302 (345)
T ss_pred HHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHH
Confidence 3332222 11211 11111 11111 11111111 23333 34567777877777775544333 4 478889
Q ss_pred HHHHHHHHHhCCCCc------hhhHHHHHHHHHHhhhheecc
Q 017940 291 MAAMFDIPLLHERLH------IGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 291 ~~~~~~~~~~~e~~~------~~~~~G~~li~~g~~l~~~~~ 326 (363)
++.+.+. +++|.=+ ...++|.+++++|..+....+
T Consensus 303 istlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 303 CGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred HHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 9999998 5999766 566889999999998876553
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.26 E-value=1.3e-11 Score=96.32 Aligned_cols=105 Identities=17% Similarity=0.319 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCC--CCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHH
Q 017940 42 TCRLLVATILLAPIGYFWERNS--RPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALP 119 (363)
Q Consensus 42 ~~r~~~~~i~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l 119 (363)
.+|+..+.+++..+...+++.+ .+..+++.+.+....|+++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5789999999988887754321 12234566777788888876699999999999999 58889999999999999999
Q ss_pred hCccccccccccCccceehhhHHHHhHHHhhhhc
Q 017940 120 FGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK 153 (363)
Q Consensus 120 ~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~ 153 (363)
++|||+++++ +++++++++|++++.+.+
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAWSD 108 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhhhh
Confidence 9999999999 999999999999998744
No 39
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.25 E-value=5.4e-11 Score=102.75 Aligned_cols=266 Identities=12% Similarity=0.092 Sum_probs=182.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccchhhhcchhhHHHHH
Q 017940 37 ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQY-TSATFACAFINMVPVITFV 115 (363)
Q Consensus 37 ~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~ii~~~~pv~~~l 115 (363)
-..++|.++++-..--++..-.. ...+++.+.|++..... + .+..+.+.++++++ ++...-.++.+-.++.+++
T Consensus 33 gNLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~---m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~ 107 (330)
T KOG1583|consen 33 GNLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVA---M-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI 107 (330)
T ss_pred eeehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehh---e-eeeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence 36777887777666555443211 12335566666544333 2 35667778899998 8888889999999999999
Q ss_pred HHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHH
Q 017940 116 IALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTL 195 (363)
Q Consensus 116 la~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 195 (363)
+++++.+.|.+.+| +.++++..+|+++......++... +.++.++.+..+....+..|+.+...+.+
T Consensus 108 ~g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~-------~~~~l~~~~~~~~~~~w~iGi~lL~~al~ 174 (330)
T KOG1583|consen 108 LGWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS-------KLSGLDSGSAQSDFFWWLIGIALLVFALL 174 (330)
T ss_pred HHHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh-------hhcccccCcccccchHHHHHHHHHHHHHH
Confidence 99999999999999 999999999999987754433221 11111111112335667889999999888
Q ss_pred HHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCC---------------cccccccchhHHHHHHHHH
Q 017940 196 LWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNH---------------SAWSFKGKIEIISVLYAGI 259 (363)
Q Consensus 196 ~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~g~ 259 (363)
.-|.-.+.++..-+++. ++-+.+++.-.. .+|..++..++. +.....-+..|..++.- +
T Consensus 175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~L----sLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n-~ 249 (330)
T KOG1583|consen 175 LSAYMGIYQETTYQKYGKHWKEALFYTHFL----SLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFN-V 249 (330)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHh----ccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHH-H
Confidence 88888887776655433 556666665544 445555543321 01111122345544433 3
Q ss_pred HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheec
Q 017940 260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 325 (363)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 325 (363)
+.+-+|.-..+..-.+.++.+++++..+.-+++.+++.+.|+.+++++.|+|..++++|..++...
T Consensus 250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344445445556667778899999999999999999999999999999999999999999988643
No 40
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.19 E-value=6.5e-10 Score=101.87 Aligned_cols=136 Identities=16% Similarity=0.112 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT 86 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (363)
..|.++.++++++|+...+..|+..+ +.++..... ...++.+++.++...... ....++..+...+..|+++..++
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA-EHGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999998876 477777654 445566666666554322 22245666766778899888999
Q ss_pred HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940 87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY 152 (363)
Q Consensus 87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~ 152 (363)
+.++++++++.+++.++++..++|+++.++++++++|+++..+ ++|.++.+.|++.....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 99999999999988753
No 41
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.19 E-value=5.8e-10 Score=91.97 Aligned_cols=138 Identities=13% Similarity=0.138 Sum_probs=113.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcc------CCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccc--------c-cchh
Q 017940 186 GTIALTVGTLLWASWFPIQSYIGKR------YPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSF--------K-GKIE 250 (363)
Q Consensus 186 G~~~~l~a~~~~a~~~i~~k~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~ 250 (363)
|.++++.+.++.|++.+..|+..++ ..++.....+....+.+++.|..+..|+....... . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999998776 34889999999999999999999887763311110 0 1233
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940 251 IISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 251 ~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 324 (363)
+..++..|++ ........+..+++++|...+++..+..+...++++++++|+++..+++|..+.++|.+++++
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 4555555554 446666777899999999999999999999999999999999999999999999999998864
No 42
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.16 E-value=7.9e-10 Score=101.26 Aligned_cols=137 Identities=15% Similarity=0.156 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT 86 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (363)
..|.++.++++++|+...+..|.... -++.....+++.++.+.+.++............+.+.|......|+++..+.
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999998643 2345667788888888877776543322112235677888888999888999
Q ss_pred HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+.++++++++.+++.++++..+.|+++.++++++++|+++..+ ++|.++.+.|+.+...
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 9999999999998875
No 43
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.14 E-value=1.8e-10 Score=94.73 Aligned_cols=212 Identities=12% Similarity=0.073 Sum_probs=157.6
Q ss_pred HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940 84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS 163 (363)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~ 163 (363)
...++.|..|++.++++.++.+..+.-.|+.+++++++++|+...+ +++.++++.|+.++.+.|.+
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN~-------- 129 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADNE-------- 129 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccch--------
Confidence 5678999999999999999999999999999999999999999999 99999999999999875532
Q ss_pred hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC--CchhHHHHHHHHHHHH-HHHHHH--HhcC
Q 017940 164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP--CKYSSTAILSLFGAIQ-AAILCL--ATNR 238 (363)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~--~~~~ 238 (363)
......|+.+++.+++..|+|-++-|+...... |....+.-..++...+ ..|... +.+.
T Consensus 130 ----------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V 193 (290)
T KOG4314|consen 130 ----------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV 193 (290)
T ss_pred ----------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch
Confidence 223358999999999999999999999875522 3222222222222221 112111 1221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHH
Q 017940 239 NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIG 318 (363)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g 318 (363)
+ .+.......|+.+...+.++.. ...+.+.++..++|...+.-+.....--...+.++-+-..+.....|.++++.|
T Consensus 194 E--~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~ 270 (290)
T KOG4314|consen 194 E--HLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG 270 (290)
T ss_pred H--HHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 1221123457777777766543 455677899999999999988888888889998766666788999999999999
Q ss_pred hhhheecccc
Q 017940 319 LYILLWGKNK 328 (363)
Q Consensus 319 ~~l~~~~~~~ 328 (363)
..+......|
T Consensus 271 FiLiiiP~d~ 280 (290)
T KOG4314|consen 271 FILIIIPEDK 280 (290)
T ss_pred HHheecccch
Confidence 9988765544
No 44
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.12 E-value=1.3e-09 Score=100.05 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=109.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cccchhHHHHHHHHH
Q 017940 182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS--FKGKIEIISVLYAGI 259 (363)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 259 (363)
+..+|+++.++++++|+...+..|.. .+ .+|.+...++..++.+...+.....++ ..... ..+...+. ....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence 34589999999999999999999875 44 478999999999998877766544321 11110 11222232 233555
Q ss_pred HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940 260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 323 (363)
+..+..+.++++++++++++.++.+.++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6677889999999999999999999999999999999999999999999999999999998775
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.10 E-value=1.8e-09 Score=101.06 Aligned_cols=140 Identities=13% Similarity=0.137 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-HHHHHHHHHHHHHHHHHHHHhhccCCC----CcCCHHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNE-LVFITCRLLVATILLAPIGYFWERNSR----PKLTLRILFCLFFSAIVG 82 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~~~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 82 (363)
.|.++++.++++|+.+.+..|....+ .++ ...+++...++.+.+.+......+... ...+... ...+..++.
T Consensus 189 lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~- 265 (358)
T PLN00411 189 IGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAII- 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHH-
Confidence 48899999999999999999988774 654 466667777666666555544332111 1123332 223345555
Q ss_pred HHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCC
Q 017940 83 TSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMP 156 (363)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~ 156 (363)
..+.+.++++++++.+++.++++.++.|+++.++++++++|+++..+ ++|.++++.|+.++...+..+
T Consensus 266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhhhhh
Confidence 46788899999999999999999999999999999999999999999 999999999999998654433
No 46
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.08 E-value=3.4e-09 Score=96.50 Aligned_cols=134 Identities=15% Similarity=0.169 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHH
Q 017940 187 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY 266 (363)
Q Consensus 187 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 266 (363)
..+.+.+++++|...+..|+..++ .++. ..+......+...|....... ...+.... ..+...+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 468899999999999999988776 3333 355555666666666554311 12232222 233334444555677888
Q ss_pred HHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheec
Q 017940 267 VGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 325 (363)
Q Consensus 267 ~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 325 (363)
.+++++.++.+++.++++.+++|+++.+++++++||+++.++++|+.+++.|+.+....
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999999987643
No 47
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.08 E-value=2.4e-09 Score=96.18 Aligned_cols=136 Identities=13% Similarity=0.135 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCC---cccccccchh-HHHHHHHHHH
Q 017940 185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNH---SAWSFKGKIE-IISVLYAGIV 260 (363)
Q Consensus 185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~~ 260 (363)
+|..+.++++++|+...+..|.. .+ -+|.+..+++++++.++..+......+.. .......... +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 58899999999999999999984 44 47899999999999887766654433210 0111111122 3344555554
Q ss_pred HHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940 261 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 261 ~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 323 (363)
.+..+.++++++++++++.++.+.++.|+++.++++++++|+++.++++|.++.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999999999999999999999999999999999999999999988764
No 48
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.02 E-value=5e-09 Score=96.09 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLT 86 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (363)
..|.+++++++++|+...+..|+..+ +.++....+ ..+.+.+.+...... ......++..+......|+. ..+.
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence 35889999999999999999998765 477765433 222333333222222 11223567778777777754 6889
Q ss_pred HHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 87 QYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 87 ~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+.++++++++.+++.++.+.++.|++..++++++++|+++..+ ++|.++++.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999999 9999999999988765
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.00 E-value=1.6e-08 Score=92.19 Aligned_cols=281 Identities=16% Similarity=0.180 Sum_probs=157.3
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHH
Q 017940 1 MKSCNEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAI 80 (363)
Q Consensus 1 M~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 80 (363)
|+ .+...|.++++.++++-+....+-|+...+ .+. .-.|. .++..+-.+++ ..+.|.
T Consensus 1 ~~-~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~~--------------~~~~~~~l~~~----~W~~G~ 57 (300)
T PF05653_consen 1 MN-TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLRA--------------GSGGRSYLRRP----LWWIGL 57 (300)
T ss_pred CC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccccc--------------cchhhHHHhhH----HHHHHH
Confidence 44 355679999999999999999988876542 110 00000 00000001122 233444
Q ss_pred HHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCC
Q 017940 81 VGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDH 160 (363)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~ 160 (363)
+.+.++..+.+.|+.+.|++.++.+..+.-++..+++..++|||++.++ +.|+.+++.|..++......+.+.
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~~~- 130 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEEPI- 130 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCCCc-
Confidence 4456777888999999999999999999999999999999999999999 999999999998876533222110
Q ss_pred CcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHH-------HHHHHH
Q 017940 161 SYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAI-------QAAILC 233 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 233 (363)
.+..+.-..- .+... ..+.... ..+...+.....+|..++ +...........++. +...+.
T Consensus 131 ---~t~~~l~~~~-----~~~~f-l~y~~~~-~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~ 198 (300)
T PF05653_consen 131 ---HTLDELIALL-----SQPGF-LVYFILV-LVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIK 198 (300)
T ss_pred ---CCHHHHHHHh-----cCcce-ehhHHHH-HHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHH
Confidence 0000000000 00111 1111111 112222222222232222 111111111111111 111111
Q ss_pred HHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhh-HHHHHHHHHHHHhCCC--Cchhh--
Q 017940 234 LATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIPLLHER--LHIGS-- 308 (363)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~-~pv~~~~~~~~~~~e~--~~~~~-- 308 (363)
....+ ..++. ++..|..++.. +.+........++|+++.+++.+.++.+. -...+.+-+.++++|. .+..+
T Consensus 199 ~~~~g-~~~f~--~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~ 274 (300)
T PF05653_consen 199 LTFSG-DNQFT--YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQII 274 (300)
T ss_pred HHhcC-chhhh--hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHH
Confidence 11111 12222 33345444333 33556677778899999999988887655 5566677777788875 45533
Q ss_pred --HHHHHHHHHHhhhheeccc
Q 017940 309 --LLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 309 --~~G~~li~~g~~l~~~~~~ 327 (363)
..|..+++.|+++....+.
T Consensus 275 ~~~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 275 GFLCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred HHHHHHHHHHHhhheeeccCc
Confidence 4678888999998875443
No 50
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.94 E-value=2.1e-08 Score=92.12 Aligned_cols=139 Identities=15% Similarity=0.197 Sum_probs=108.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHHhhccCC-----CCcCCHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEG--MNELVFITCRLLVATILLAPIGYFWERNS-----RPKLTLRILFCLFFSA 79 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~r~~~~~i~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g 79 (363)
..|.+++++++++|+...+..|...++. .+.....++....+.+.+.......+... ....+...+...+..|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 3699999999999999999999875421 12233344444444433333322222111 1235678888889999
Q ss_pred HHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 80 IVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+++..+.+.+++.++++.++++++.+..+.|++..++++++++|+++..+ ++|.++.+.|+.+...
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence 99889999999999999999999999999999999999999999999999 9999999999998765
No 51
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.93 E-value=4.8e-08 Score=84.48 Aligned_cols=261 Identities=13% Similarity=0.094 Sum_probs=183.1
Q ss_pred CCCh--HHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhH
Q 017940 34 GMNE--LVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPV 111 (363)
Q Consensus 34 ~~~~--~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv 111 (363)
++.| +.+++.++++-..+.+.-.... +.+.+..+||.. ..++.+ ....+.+..-++.|++-..-.++.++--+
T Consensus 70 gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rtY---~~la~~-t~gtmGLsn~SlgYLNYPtQviFKccKli 144 (367)
T KOG1582|consen 70 GFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRTY---VILAFL-TVGTMGLSNGSLGYLNYPTQVIFKCCKLI 144 (367)
T ss_pred cCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhHh---hhhHhh-hhhccccCcCccccccCcHHHHHHhhhhh
Confidence 4554 5677788777655555444322 223333455543 444444 35566666677888777666666776666
Q ss_pred HHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHH
Q 017940 112 ITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALT 191 (363)
Q Consensus 112 ~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 191 (363)
=+.+.+.++-+.|....+ +++..+...|+++....|.. + +++-+..|+.+.-
T Consensus 145 PVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~------------------~----sPNF~~~Gv~mIs 196 (367)
T KOG1582|consen 145 PVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQ------------------T----SPNFNLIGVMMIS 196 (367)
T ss_pred hhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhcccc------------------c----CCCcceeeHHHHH
Confidence 666778888888888877 99999999999999875542 1 2333458888888
Q ss_pred HHHHHHHHHHHHHHhhhccCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCccccc---ccchhHHHHHHHHHHHHHHHHH
Q 017940 192 VGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWSF---KGKIEIISVLYAGIVGSGLCYV 267 (363)
Q Consensus 192 ~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~ 267 (363)
.|-++-|.---.+++..+..+ +..+..++...++.+..+......++-.+.|.. .+....+..++.+. ++.++..
T Consensus 197 gALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~ 275 (367)
T KOG1582|consen 197 GALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIV 275 (367)
T ss_pred HHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHH
Confidence 888888877777777766544 445667777778888777766666554343421 12223344444443 4556666
Q ss_pred HhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940 268 GLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK 328 (363)
Q Consensus 268 ~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 328 (363)
.....++..+|..++.+....-.+++++++++|..++|....-|..+++.|+++-.+.++.
T Consensus 276 ~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 276 FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 6777788899999999999999999999999999999999999999999999998887743
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.90 E-value=5.8e-08 Score=76.96 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=93.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHH
Q 017940 185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 264 (363)
Q Consensus 185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 264 (363)
.|.++.+.+.++-+...++.|+-.++.++ ...... . ....... . + ....++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~-----~~~~~~~--------~---~---p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F-----IAALLAF--------G---L---ALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H-----HHHHHHH--------h---c---cHHHHHHHHHHHHH
Confidence 47789999999999999999998877432 221111 0 0000000 0 1 01245677888999
Q ss_pred HHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHH--HhCCCCchhhHHHHHHHHHHhhhheecccc
Q 017940 265 CYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIP--LLHERLHIGSLLGSITVIIGLYILLWGKNK 328 (363)
Q Consensus 265 ~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 328 (363)
++.+|.+++++.+++.+.++....+++..+.++. ++||++|+.+++|++++++|+++..+.++|
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999998888888875 899999999999999999999999865543
No 53
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.88 E-value=3.9e-10 Score=96.01 Aligned_cols=276 Identities=18% Similarity=0.170 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQ 87 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (363)
..++.+++-++.||..+....+. |-+|.+.+.-.-+-+.++.+.+.++ ..|..+.+.+...++.|++ -.+++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~-Ws~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAF-WSFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhH-hhhhh
Confidence 46788999999999999877654 5567666655444444444433333 2344678888888899988 58999
Q ss_pred HHHHHHhhccCccchhhhc-chhhHHHHHHHHHhCccccccccccCcccee---hhhHHHHhHHHhhhhcCCCccCCCcc
Q 017940 88 YFFLLGIQYTSATFACAFI-NMVPVITFVIALPFGLETVDIKGISGKAKVV---GTLVCIGGAMLLTLYKGMPLFDHSYS 163 (363)
Q Consensus 88 ~~~~~al~~~~~~~~~ii~-~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~---gi~~~~~Gv~l~~~~~~~~~~~~~~~ 163 (363)
...+.|+++.+.+.+..+. .++-+-+.+++++.++|-.+..+ .++ ++++.++|+.+.++.+..+..
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~~~nk~----- 143 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQDRNNKE----- 143 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeecccccc-----
Confidence 9999999999999999985 59999999999999999877655 122 345556666666653321111
Q ss_pred hhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 017940 164 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAW 243 (363)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (363)
.++.++..+|....+.+.+.|-.|.++.+...-+ .++...-+.....+..+.+... +.+. ..
T Consensus 144 -------------~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~saiLPqAiGMv~~ali~~~~-~~~~-~~ 205 (288)
T COG4975 144 -------------EENPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAILPQAIGMVIGALILGFF-KMEK-RF 205 (288)
T ss_pred -------------ccChHhhhhheeeeeeeccceeeeEeeecccccc---chhhhhHHHHHHHHHHHHHhhc-cccc-ch
Confidence 2335566789999999999999999988776533 2333333332222222222222 1111 11
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHh
Q 017940 244 SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGL 319 (363)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~ 319 (363)
++..|.. +..|+. -+.+..++..+.++.+.+..=.++.+..+++.+-+.++++|+=|..++ +|++++++|.
T Consensus 206 ---~K~t~~n-ii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvga 280 (288)
T COG4975 206 ---NKYTWLN-IIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGA 280 (288)
T ss_pred ---HHHHHHH-HhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHh
Confidence 2233433 334443 346788888899999998888899999999999999999999998876 5888888887
Q ss_pred hhhee
Q 017940 320 YILLW 324 (363)
Q Consensus 320 ~l~~~ 324 (363)
.+...
T Consensus 281 i~lg~ 285 (288)
T COG4975 281 ILLGI 285 (288)
T ss_pred hhhhe
Confidence 76644
No 54
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.87 E-value=3e-08 Score=87.13 Aligned_cols=210 Identities=14% Similarity=0.045 Sum_probs=126.3
Q ss_pred cchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCC---
Q 017940 100 TFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHP--- 176 (363)
Q Consensus 100 ~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 176 (363)
.......+..++++++.++.+.++|.+..+ +++.++...|+......+.+.... ..-..+...-|.++
T Consensus 5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al---~~l~~~~~~~~~~~~~~ 75 (222)
T TIGR00803 5 PIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSL---KLLKLGVAIVQMVQSSA 75 (222)
T ss_pred cchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHH---HHHHHhHeeeecCCCCc
Confidence 344566778889999999999999988777 999999888887654432110000 00000000000000
Q ss_pred -CCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhH-HHHHHHHHHHHHHHHHHHhcCCC-cccc--cccchhH
Q 017940 177 -TRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSS-TAILSLFGAIQAAILCLATNRNH-SAWS--FKGKIEI 251 (363)
Q Consensus 177 -~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~ 251 (363)
.....+...|....+.+.++-+...+..++..++.+..... +......+.+...........+. ..+. ...+...
T Consensus 76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (222)
T TIGR00803 76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV 155 (222)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHH
Confidence 01112445677777788888888888888876663221111 11111222221111111111111 1111 0011111
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940 252 ISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL 322 (363)
Q Consensus 252 ~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~ 322 (363)
+. . ++....+..+..+.+++.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus 156 ~~---~-~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 156 WI---V-GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HH---H-HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 11 1 2335567777889999999999999999999999999999999999999999999999998753
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.84 E-value=1.9e-08 Score=92.60 Aligned_cols=140 Identities=18% Similarity=0.222 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCH----------HHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEE-GMNELVFITCRLLVATILLAPIGYFWERNSRPKLTL----------RILFCL 75 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~----------~~~~~~ 75 (363)
..|.+++++++++|+...+..|...++ +.++..++++....+.+.++|+....+.......++ ..+...
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 469999999999999999999987651 489999999999999988888876543211100000 111112
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940 76 FFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY 152 (363)
Q Consensus 76 ~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~ 152 (363)
+..+.......+.+++.+++++++..++++..+.|+++.++++++++|+++..+ ++|.++++.|+.+....
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~~ 294 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSRV 294 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHHH
Confidence 233332234445677789999999999999999999999999999999999999 99999999999998754
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.80 E-value=3.5e-08 Score=76.91 Aligned_cols=107 Identities=21% Similarity=0.373 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHH
Q 017940 220 ILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 299 (363)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~ 299 (363)
++...+.+..........+............+...+..|.+....++.++.++.++.++ .++.+..++|+++.+++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555553332111221122345555666666666899999999999994 88899999999999999999
Q ss_pred hCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 300 LHERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 300 ~~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
++|+++..+++|++++++|+.+..+.+-
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999987543
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.73 E-value=2.5e-07 Score=76.12 Aligned_cols=133 Identities=20% Similarity=0.318 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHHhhccCCCCc----C-------CHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLEE------GMNELVFITCRLLVATILLAPIGYFWERNSRPK----L-------TLRI 71 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~----~-------~~~~ 71 (363)
|.++++.+.++.+...+..|...++ +.++..+..+....+.+++++.....+.....+ . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5688999999999999999998775 678999999999999999999888765543111 0 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHH
Q 017940 72 LFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 148 (363)
Q Consensus 72 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l 148 (363)
+...+..|+++ +..+...+..++++++...+++..+-.+.+.++++++++|+++..+ ++|+.+++.|+.+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 66666777775 8889999999999999999999999999999999999999999999 9999999999875
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.69 E-value=3.7e-07 Score=85.64 Aligned_cols=139 Identities=19% Similarity=0.254 Sum_probs=103.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHHhhccCCC-----------CcCCH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEE------GMNELVFITCRLLVATILLAPIGYFWERNSR-----------PKLTL 69 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~-----------~~~~~ 69 (363)
..|.+++++++++|+...++.|...++ +.++.....+....+.++++|+....+.... ....+
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 469999999999999999999998763 2557767777778888888887764422110 00111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHh
Q 017940 70 RILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL 149 (363)
Q Consensus 70 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~ 149 (363)
......++.+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++..+ ++|.++++.|+++.
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~lY 346 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHHHH
Confidence 112222222222234555555579999999999999999999999999999999999999 99999999999886
Q ss_pred hh
Q 017940 150 TL 151 (363)
Q Consensus 150 ~~ 151 (363)
..
T Consensus 347 s~ 348 (350)
T PTZ00343 347 SL 348 (350)
T ss_pred hh
Confidence 53
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.62 E-value=5.8e-07 Score=82.12 Aligned_cols=129 Identities=14% Similarity=0.223 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH----HHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLL----VATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVG 82 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 82 (363)
.+|+++.+++++.++......|.. +.+|...++.... .+.++..+. + ++ .+ .+.+.....++.|++
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~~-~~-~~~~~~~~~~~~Gi~- 220 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I-LA-KP-LKKYAILLNILPGLM- 220 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h-cc-cc-hHHHHHHHHHHHHHH-
Confidence 689999999999999999999965 4888888655555 333333322 1 11 22 234455556668988
Q ss_pred HHHHHHHHHHHhh-ccCccchhhhcchhhHHHHHHHHHhCccccccccccCccce----ehhhHHHHhHHHhhh
Q 017940 83 TSLTQYFFLLGIQ-YTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKV----VGTLVCIGGAMLLTL 151 (363)
Q Consensus 83 ~~~~~~~~~~al~-~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~----~gi~~~~~Gv~l~~~ 151 (363)
..+.+.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++ + +|.++.+.|+.++..
T Consensus 221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHhc
Confidence 5999999999999 9999999999999999999999999999999999 9 999999999988753
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.60 E-value=5.5e-07 Score=69.66 Aligned_cols=68 Identities=22% Similarity=0.240 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940 77 FSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 150 (363)
Q Consensus 77 ~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~ 150 (363)
..+++++.+++.++..++++.|.+.+..+.++.++++.+++++++|||++.++ ++|+.+++.|+.++.
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 34446678899999999999999999999889999999999999999999999 999999999998875
No 61
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.59 E-value=1.4e-06 Score=79.26 Aligned_cols=134 Identities=16% Similarity=0.248 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHH-HHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFIT-CRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL 85 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (363)
..|.++.+++++.|+...+..|... ..++..... +.+........+... ...+ ...+.+.+......|+++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFL-SGFG--APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999775 366666665 444322222222221 1111 335678899999999998678
Q ss_pred HHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 86 TQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 86 ~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
.+.+++++++..+++.++.+..+.|++..++++++++|+++..+ ++|+++.+.|+.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~~ 287 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999 9999999999998874
No 62
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.58 E-value=3.2e-07 Score=81.72 Aligned_cols=277 Identities=13% Similarity=0.139 Sum_probs=162.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
+..+|.++++.+.++.|.+.++-|+...+ ... .-.+......+.- +. +....|.+.+.
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~--------~~~ra~~gg~~yl-~~--~~Ww~G~ltm~ 75 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA--------SGLRAGEGGYGYL-KE--PLWWAGMLTMI 75 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh--------hcccccCCCcchh-hh--HHHHHHHHHHH
Confidence 45578889999999999999999987663 111 0011111111111 22 34456777788
Q ss_pred HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcch
Q 017940 85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQ 164 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~ 164 (363)
++..+.|.|..+.|++.++.+.++..++.++++..+++||++... .+|+.+++.|-.++......+.+ -.
T Consensus 76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~haP~e~~----i~ 145 (335)
T KOG2922|consen 76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIHAPKEQE----IE 145 (335)
T ss_pred HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEecCcccc----cc
Confidence 889999999999999999999999999999999999999999999 99999999998877653322111 11
Q ss_pred hhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHH-hhhccCCCchhHHHHHHHHHHH-------HHHHHHHHh
Q 017940 165 AETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQS-YIGKRYPCKYSSTAILSLFGAI-------QAAILCLAT 236 (363)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 236 (363)
+..+.-..-.+| .. ......+.-. ..+-....| +..+ .+.+.+.....+.++. +...+-...
T Consensus 146 t~~el~~~~~~~-----~F-liy~~~iil~--~~il~~~~~p~~g~--tnilvyi~i~s~iGS~tV~svKalg~aiklt~ 215 (335)
T KOG2922|consen 146 SVEEVWELATEP-----GF-LVYVIIIILI--VLILIFFYAPRYGQ--TNILVYIGICSLIGSLTVMSVKALGIAIKLTF 215 (335)
T ss_pred cHHHHHHHhcCc-----cH-HHHHHHHHHH--HHHHheeecccccc--cceeehhhHhhhhcceeeeeHHHHHHHHHHHh
Confidence 111000001111 00 1111111111 111111111 1111 1333333333333221 111111122
Q ss_pred cCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhh-HHHHHHHHHHHHhCCCC--chh----hH
Q 017940 237 NRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIPLLHERL--HIG----SL 309 (363)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~-~pv~~~~~~~~~~~e~~--~~~----~~ 309 (363)
.++ .+.. .+..|..++.+.. +.....-..++|++..+++.++++.++ -..++++-+.++|+|.- +.. ..
T Consensus 216 ~g~-~ql~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~ 291 (335)
T KOG2922|consen 216 SGN-NQLF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGEL 291 (335)
T ss_pred cCC-cccc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 221 2222 2244555444443 445677777899999999998887655 56777788888998853 333 45
Q ss_pred HHHHHHHHHhhhheeccc
Q 017940 310 LGSITVIIGLYILLWGKN 327 (363)
Q Consensus 310 ~G~~li~~g~~l~~~~~~ 327 (363)
.|...++.|+++....|.
T Consensus 292 ~Gf~ti~~G~flL~~~kd 309 (335)
T KOG2922|consen 292 CGFVTIFLGIFLLHRTKD 309 (335)
T ss_pred HhHHHhhheeeEeeeecc
Confidence 688889999988854443
No 63
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.56 E-value=1.2e-06 Score=77.19 Aligned_cols=140 Identities=13% Similarity=0.103 Sum_probs=114.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc-cccchhHHHHHHHHHHHH
Q 017940 184 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS-FKGKIEIISVLYAGIVGS 262 (363)
Q Consensus 184 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~ 262 (363)
..|+++++.|-+.|+..-.+.|-+.+- ++.++..++.+.+............+....++ ...+..+......+.+ .
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 489999999999999998888776554 66899999999988887777766544222222 2244556666666665 4
Q ss_pred HHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 263 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 263 ~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
......|.+|..+.....+|.=.+++|.+.+++|.++++|+++..|++..++..+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999999999999999999999999998776543
No 64
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.53 E-value=9.3e-07 Score=76.02 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=118.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940 6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL 85 (363)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (363)
+..|..+++.+..+|+.+-+..|..-. ..+.-.-+..-+.++.++.+|+..... ..--.++......+..|+++..+
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~a--g~~l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQA--GPALFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhc--chhhcChHHHHHHHHHHHHhccc
Confidence 457999999999999999999998865 366666777889999999999986532 22335778888888999999999
Q ss_pred HHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 86 TQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 86 ~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
.+.+-..+++..|...-+++.++.|.+..+.++++++|+++..| |+++...+.+.+-...
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~l 282 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGSTL 282 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999 9999988877764443
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.52 E-value=1e-06 Score=68.18 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940 258 GIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 258 g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 323 (363)
++++.+.++.++..++++.+.+.+-.+..+.++.+.+++++++||+++..+++|..++++|+.+..
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 335567899999999999999999999999999999999999999999999999999999998765
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.40 E-value=3.9e-06 Score=66.54 Aligned_cols=119 Identities=18% Similarity=0.240 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQ 87 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (363)
+++++.++..++-+...++.|...++ .+....... .. . .+ .. . . . ....+..|++.+.+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~~-~--~~--~~-~--~-----~----p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-FI-A--AL--LA-F--G-----L----ALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-HH-H--HH--HH-H--h-----c----cHHHHHHHHHHHHHHH
Confidence 47888999999999999999998774 443322111 10 0 00 00 0 0 0 0114566777789999
Q ss_pred HHHHHHhhccCccchhhhcchhhHHHHHHHHH--hCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 88 YFFLLGIQYTSATFACAFINMVPVITFVIALP--FGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 88 ~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l--~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
.++..++++.+.+.+..+.+..++++.+.++. +++|+++..+ ++|+++.+.|+.++..
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhcc
Confidence 99999999999999999999999888888885 8999999999 9999999999999874
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.14 E-value=4.5e-05 Score=70.38 Aligned_cols=142 Identities=15% Similarity=0.062 Sum_probs=112.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcC--CHHHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKL--TLRILFCLFFSAIVG 82 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 82 (363)
++.+|-++++.+++++|.+.+.-+...+ +.++..+..+-.+.+.++..+.....++....+. +++.....+.- .+.
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~-~~~ 242 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY-ALC 242 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH-HHH
Confidence 5678999999999999999999999988 5888888888788888887777766666544333 44444333333 334
Q ss_pred HHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhcC
Q 017940 83 TSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKG 154 (363)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~ 154 (363)
.+..+.+.-..+++.++....+=.-+..++..+++++++++++++.. ++|.+++++|.++....+.
T Consensus 243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccCC
Confidence 57777777888899999877766678899999999999999999999 9999999999999876443
No 68
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=98.03 E-value=0.00016 Score=58.12 Aligned_cols=131 Identities=17% Similarity=0.148 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHH
Q 017940 187 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY 266 (363)
Q Consensus 187 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 266 (363)
.++++.++.+-++....+.++.++..+|+..+++.+..+.+.+..+....++. .........|+..+ .|+ ......
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHHH
Confidence 57889999999999999999999866799999999999999988888776653 22211222344333 444 344566
Q ss_pred HHhhhhcccCCcchhhhhhhh-HHHHHHHHHHH----HhCCCCchhhHHHHHHHHHHhhh
Q 017940 267 VGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIP----LLHERLHIGSLLGSITVIIGLYI 321 (363)
Q Consensus 267 ~~~~~a~~~~~a~~~s~~~~~-~pv~~~~~~~~----~~~e~~~~~~~~G~~li~~g~~l 321 (363)
....+.+++.+++....+... |-+.+.+++.+ .-++++++.+++|.+++++|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 667788899998887776544 77778888885 23578899999999999999864
No 69
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.97 E-value=2.4e-06 Score=74.06 Aligned_cols=138 Identities=12% Similarity=0.119 Sum_probs=105.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHH
Q 017940 182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVG 261 (363)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 261 (363)
....|..+..++ ..+....+..++.... ||......+++.-..+..|+.+..... .+.....+.|+. .=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~Li--LRg~m- 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWLI--LRGFM- 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEEE--eehhh-
Confidence 445888888888 8888888888888776 677888777777776666665543322 122222233332 23333
Q ss_pred HHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 262 SGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 262 ~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
+..+..+.+++.++.+.+-+.++....|+++.++++++++|+.|..+.+|..+.+.|++++.+..-
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 335677777999999999999999999999999999999999999999999999999999986543
No 70
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.96 E-value=0.0033 Score=57.34 Aligned_cols=302 Identities=15% Similarity=0.110 Sum_probs=180.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccC----CCCcCCHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERN----SRPKLTLRILFCLFFSAI 80 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~----~~~~~~~~~~~~~~~~g~ 80 (363)
+-..|+++..++.++-|...+-.|+.-+ .+.-..=.+...++.+++-.+.-...-. .....+...+....+.|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 4568999999999999999998887533 5543333334444433332222111111 112245677888888898
Q ss_pred HHHHHHHHHHHHHhhccCccchh-hhcchhhHHHHHHHHHhCcccc-ccccccCccceehhhHHHHhHHHhhhhcCCCcc
Q 017940 81 VGTSLTQYFFLLGIQYTSATFAC-AFINMVPVITFVIALPFGLETV-DIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLF 158 (363)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pv~~~lla~l~~~e~~-~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~ 158 (363)
+ -.++...|-.+++|+..+... +...+.-++..++-.++.++-- -..++.+...++|++++++|+.+....+...+.
T Consensus 82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~ 160 (344)
T PF06379_consen 82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK 160 (344)
T ss_pred H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence 8 588899999999999999874 4467888888888777654310 011223445599999999999998764322111
Q ss_pred CCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhh-------ccCCCchhH----HHHHHHHHHH
Q 017940 159 DHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIG-------KRYPCKYSS----TAILSLFGAI 227 (363)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~-------~~~~~~~~~----~~~~~~~~~~ 227 (363)
. . +.+.++.+..+|.++++++++.-|..++-...-. +...+|+.. ....+..+.+
T Consensus 161 ~------~--------~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~ 226 (344)
T PF06379_consen 161 E------L--------GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFI 226 (344)
T ss_pred h------h--------ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHH
Confidence 0 0 0022345667999999999999888877654221 111122221 2233344455
Q ss_pred HHHHHHHHhc---CCCc---ccccccc---hhHHHHHHHHHHHHHHHHHHhhhhcccCCc----chhhhhhhhHHHHHHH
Q 017940 228 QAAILCLATN---RNHS---AWSFKGK---IEIISVLYAGIVGSGLCYVGLTWCVKKKGP----VFTAAFSPLVQIMAAM 294 (363)
Q Consensus 228 ~~~~~~~~~~---~~~~---~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a----~~~s~~~~~~pv~~~~ 294 (363)
.-....++.. ++.. +.....+ ......+..|.+ =..++++|-++-.+.++ .--.+.+.+..+++-+
T Consensus 227 tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snv 305 (344)
T PF06379_consen 227 TNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNV 305 (344)
T ss_pred HHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHH
Confidence 5555554431 2222 1111111 122333344443 33566677677666663 4455678888999999
Q ss_pred HHHHHhCCC------CchhhHHHHHHHHHHhhhheec
Q 017940 295 FDIPLLHER------LHIGSLLGSITVIIGLYILLWG 325 (363)
Q Consensus 295 ~~~~~~~e~------~~~~~~~G~~li~~g~~l~~~~ 325 (363)
++. .++|. .-..-++|+.+++.++.++-+.
T Consensus 306 wGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 306 WGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 997 56663 2344568888888888877554
No 71
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.96 E-value=8.2e-05 Score=66.09 Aligned_cols=116 Identities=12% Similarity=0.107 Sum_probs=90.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940 6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL 85 (363)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (363)
..++++.++++++.+..+..+.|.. ++++....+-+..--.+.-.++....++ ....|....-++.|++ ...
T Consensus 136 ~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~-w~i 207 (269)
T PF06800_consen 136 MKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLI-WGI 207 (269)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccc----cccccchHHhhHHHHH-HHH
Confidence 4679999999999999999998864 5788777766554444444444433211 1233445556777888 689
Q ss_pred HHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCcccccccc
Q 017940 86 TQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKG 129 (363)
Q Consensus 86 ~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~ 129 (363)
++.+++.+.+....+.+-.+.++.+++..+.+.+++||+=++++
T Consensus 208 gnl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke 251 (269)
T PF06800_consen 208 GNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE 251 (269)
T ss_pred HHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence 99999999999999999999999999999999999999977776
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.91 E-value=5.9e-05 Score=58.74 Aligned_cols=68 Identities=24% Similarity=0.383 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 259 IVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
++..++++.++..++++.+.+.+=.+ ..+..+.+.+.+++++||++++.+++|+.++++|++..+...
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 34456789999999999998776555 468999999999999999999999999999999999886544
No 73
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.88 E-value=0.00036 Score=64.28 Aligned_cols=128 Identities=17% Similarity=0.052 Sum_probs=95.2
Q ss_pred HHHHHHHHHhhhccCC-C--chhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 017940 197 WASWFPIQSYIGKRYP-C--KYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCV 273 (363)
Q Consensus 197 ~a~~~i~~k~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 273 (363)
+..+.+.+++..++.. . |..+++.++....+...+.......+.. ....+...+..++ ....+..+.+.++
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~al 85 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-----RKIPLKKYAILSF-LFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-----CcChHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3345566777765522 3 6778888888888777766655441111 1123333444444 3567778889999
Q ss_pred ccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccc
Q 017940 274 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM 330 (363)
Q Consensus 274 ~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~ 330 (363)
++++.....++....|+.+++++++++|++.+..++++++++.+|+.+....+.++.
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~ 142 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS 142 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence 999999999999999999999999999999999999999999999999987665443
No 74
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.79 E-value=0.00013 Score=56.16 Aligned_cols=67 Identities=10% Similarity=0.158 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 260 VGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
+..+.++.++..++++.+.+.+=.+ ..+..+.+.+.++++|||++++.+++|+.++++|++..+...
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3456788888999999988766554 568889999999999999999999999999999999986544
No 75
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.76 E-value=0.00088 Score=53.91 Aligned_cols=139 Identities=15% Similarity=0.141 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHH
Q 017940 185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 264 (363)
Q Consensus 185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 264 (363)
...+.+++++.+-.+..-.+.++.+...+|.......+..+.+.+..+.+..++ .+.+.......|+..+ -|.++ .+
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~-GG~lG-a~ 81 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWI-GGLLG-AI 81 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHH-ccchh-hh
Confidence 567889999999999999999999887789999999999999988888877433 3333322333444332 22332 22
Q ss_pred HHHHhhhhcccCCcch-hhhhhhhHHHHHHHHHHHHhC----CCCchhhHHHHHHHHHHhhhheecc
Q 017940 265 CYVGLTWCVKKKGPVF-TAAFSPLVQIMAAMFDIPLLH----ERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 265 ~~~~~~~a~~~~~a~~-~s~~~~~~pv~~~~~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
--+.-.....+.+++. ...+..-|-+.+.+++.+=+. .+++..+++|++++++|+++..+++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 2223334556666544 444556677888888876443 5789999999999999966665443
No 76
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.66 E-value=0.00027 Score=64.61 Aligned_cols=121 Identities=16% Similarity=0.166 Sum_probs=87.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccCCC-chhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHH
Q 017940 182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPC-KYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIV 260 (363)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 260 (363)
++..|..+++.++++.+....++|+-..+.+. +... ..+ ..+......|+. |.+
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~~--~~~~l~~~~W~~----G~~ 58 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GSG--GRSYLRRPLWWI----GLL 58 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cch--hhHHHhhHHHHH----HHH
Confidence 45689999999999999999999987665321 0000 000 000001112322 222
Q ss_pred HHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 261 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 261 ~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
...++..+.+.|....+++.++++..+..++..+++..+++|+++..+++|+.+++.|..+......
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~ 125 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP 125 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence 3345556667788889999999999999999999999999999999999999999999988765443
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.53 E-value=0.0003 Score=54.08 Aligned_cols=66 Identities=15% Similarity=0.322 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 80 IVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+.++.+++.++..++++.|.+.+..+ ..+..+.+.++++++++|+++..+ ++|+.+.++|++++-.
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 44467888999999999999999776 668999999999999999999999 9999999999999864
No 78
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.52 E-value=0.00023 Score=55.45 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 79 AIVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
.+..+.++++++..++++.|.+.+..+ .....+.+.+++.++++|+++..+ ++|+.+.+.|++++-.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence 344468889999999999999999777 579999999999999999999999 9999999999998864
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.50 E-value=0.00056 Score=51.55 Aligned_cols=65 Identities=23% Similarity=0.276 Sum_probs=56.5
Q ss_pred HHHHHHHhhhhcccCCcch-hhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 262 SGLCYVGLTWCVKKKGPVF-TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 262 ~~~~~~~~~~a~~~~~a~~-~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
...+|.+...++|+.+... .+...-+..+.+.+.++++|||+.++.+++|..++++|+...+...
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 4578888899999988654 5667888999999999999999999999999999999999887543
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.49 E-value=0.00027 Score=53.20 Aligned_cols=65 Identities=22% Similarity=0.285 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 81 VGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+++.+++.++-.+++++|.+.+..+ ...-.+.+.+.++++++|+++..+ ++++.+.+.|++.+-.
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhhh
Confidence 3467889999999999999998555 779999999999999999999999 9999999999998754
No 81
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.46 E-value=0.003 Score=48.37 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=54.5
Q ss_pred HHHHHHHHhhhhcccCCcchh-hhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940 261 GSGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 261 ~~~~~~~~~~~a~~~~~a~~~-s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 323 (363)
....++.+...++|+.+.+.+ ++...+..+.+.+.+++++||++++.+++|+.+++.|+...+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 346788899999999987554 555678889999999999999999999999999999998864
No 82
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.45 E-value=0.00031 Score=53.87 Aligned_cols=110 Identities=17% Similarity=0.267 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017940 14 IAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLG 93 (363)
Q Consensus 14 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 93 (363)
++..++||...++.|.... +.++..-.. |..-.... ++ .+++.+. .+++ .-.+...|+..
T Consensus 2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~-----Ll--------~n~~y~i-pf~l----Nq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKF-----LL--------LNPKYII-PFLL----NQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHH-----HH--------HhHHHHH-HHHH----HHHHHHHHHHH
Confidence 4568999999999999877 455433321 32111111 00 1122222 2222 34556778899
Q ss_pred hhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHh
Q 017940 94 IQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL 149 (363)
Q Consensus 94 l~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~ 149 (363)
++..+.+.+..+ +++.-++|++.++++.+|..+++. ++|+.+.+.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 999999999888 589999999999888888888888 99999999998753
No 83
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.45 E-value=0.001 Score=50.88 Aligned_cols=63 Identities=11% Similarity=0.101 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHh
Q 017940 81 VGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL 149 (363)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~ 149 (363)
.++.+++++...+++++|.+.+..+ .....+.+.++++++++|+++..+ ++|+.+.+.|+..+
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 3367889999999999999999555 669999999999999999999999 99999999999876
No 84
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.43 E-value=0.00047 Score=62.95 Aligned_cols=139 Identities=22% Similarity=0.241 Sum_probs=112.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhh---cCCChHHHHHHHHHHHHHHHH-HHHHhhccCCC---C--cCCHHHHHHHH
Q 017940 6 EWKPLIAMIAVEFGFATVNIFLKKVLE---EGMNELVFITCRLLVATILLA-PIGYFWERNSR---P--KLTLRILFCLF 76 (363)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~i~l~-~~~~~~~~~~~---~--~~~~~~~~~~~ 76 (363)
+..|.+.++.+.+..++..++.|..+. ..++++.......-++.+.++ |+....+.... . ..+...+. ..
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HH
Confidence 468999999999999999999999883 358899999888888888888 88766544332 1 23334333 33
Q ss_pred HHHHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940 77 FSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY 152 (363)
Q Consensus 77 ~~g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~ 152 (363)
+..++ ..+.|...|..++.+++-..++...+--+++...+++++++++++.+ ..|.++++.|+.+-...
T Consensus 240 ~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~~~ 308 (316)
T KOG1441|consen 240 LNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYSRA 308 (316)
T ss_pred HHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHHHH
Confidence 34466 47778888999999999999999988888888999999999999999 99999999999987753
No 85
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.42 E-value=0.00045 Score=52.57 Aligned_cols=66 Identities=11% Similarity=0.101 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 80 IVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+.++..++++...+++..|.+.+..+ .....+.+.+++.++++|++++.+ ++|+.+.+.|++.+-.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhhc
Confidence 34468889999999999999999655 669999999999999999999999 9999999999998753
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.40 E-value=0.00091 Score=50.89 Aligned_cols=64 Identities=22% Similarity=0.207 Sum_probs=55.4
Q ss_pred HHHHHHHHhhhhcccCCcchh-hhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940 261 GSGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 261 ~~~~~~~~~~~a~~~~~a~~~-s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 324 (363)
+...++.+...++|+.+.+.+ +...-+..+.+.+.+++++||++++.+++|+.++++|++..+.
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 456788889999999987554 5556689999999999999999999999999999999998754
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.38 E-value=0.0014 Score=60.68 Aligned_cols=137 Identities=13% Similarity=0.119 Sum_probs=92.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHH-----HhcCCC-cccccccchhHHHHHH
Q 017940 183 WTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCL-----ATNRNH-SAWSFKGKIEIISVLY 256 (363)
Q Consensus 183 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~ 256 (363)
...|+++.+++++||+.+.+-.|+ .++. + ++.. |. ..+. +...+.. +..++. ......+...+...+.
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~-wE~~-W~-v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKKW-S-WETM-WS-VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCCC-c-hhHH-HH-HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 458999999999999999999998 4442 3 4444 43 2222 2222111 111111 1122223445555556
Q ss_pred HHHHHHHHHHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCC---c----hhhHHHHHHHHHHhhhheecc
Q 017940 257 AGIVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERL---H----IGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 257 ~g~~~~~~~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~---~----~~~~~G~~li~~g~~l~~~~~ 326 (363)
.|++- .+++..+..++++.+.+...++ .-++-+.+.+++.+++||.. + ..-.+|.+++++|+.+..+.-
T Consensus 79 ~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 79 FGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 66654 5799999999999999888777 56788999999999999765 2 235679999999999998744
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.34 E-value=0.0029 Score=50.93 Aligned_cols=130 Identities=15% Similarity=0.169 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940 10 LIAMIAVEFGFATVNIFLKKVLEEGMN-ELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY 88 (363)
Q Consensus 10 ~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (363)
.++++++..+-+....+.....+. .. |...+++.+..+.+.+..+....+++.....+ +.-++...-|++| ...-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence 466777777788888777777664 55 99999999999999998888877654222222 2233344577776 77778
Q ss_pred HHHHHhhccCccchhhh-cchhhHHHHHHHHH----hCccccccccccCccceehhhHHHHhHHH
Q 017940 89 FFLLGIQYTSATFACAF-INMVPVITFVIALP----FGLETVDIKGISGKAKVVGTLVCIGGAML 148 (363)
Q Consensus 89 ~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l----~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l 148 (363)
+.......++++.+..+ ..-+-+...++-.+ .-+++++..+ ++|+++.+.|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence 88899999999888666 34556666666664 3567788888 9999999999864
No 89
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.08 E-value=0.0019 Score=57.36 Aligned_cols=78 Identities=13% Similarity=0.179 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccccc
Q 017940 251 IISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE 329 (363)
Q Consensus 251 ~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 329 (363)
...+..-+++ ..+...+.+.++++.+|+...++..+..+++.++++++++.+++..||++..+.++|+.+........
T Consensus 17 ~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 17 TLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3344444443 55777888899999999999999999999999999999999999999999999999999988766544
No 90
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.06 E-value=0.0034 Score=57.54 Aligned_cols=143 Identities=11% Similarity=0.160 Sum_probs=108.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhccCCC---CcCCHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEG---MNELVFITCRLLVATILLAPIGYFWERNSR---PKLTLRILFCLFFS 78 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~---~~~~~~~~~~~~~~ 78 (363)
|...|-++++++++++|.+.++.|.-.+++ ++--.+..+-.++..++++|..+..+.-+. .-.+..+....++.
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 346899999999999999999999877632 443333334455666666654443322222 22344556667888
Q ss_pred HHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhc
Q 017940 79 AIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK 153 (363)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~ 153 (363)
|+++.+++.+++..|.-.+++-.+++-..++.-..++.-.++.+.++++.+ ++|.+.+++|.+++...+
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNISS 392 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheeccc
Confidence 999999999999999999999999988887777777777888888899999 999999999999987644
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.04 E-value=0.0028 Score=47.27 Aligned_cols=55 Identities=22% Similarity=0.260 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhH
Q 017940 81 VGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLV 141 (363)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~ 141 (363)
..+..++.++..+++++|.+.+..+ ..+..+.+.+.+.++++|+++..+ ++|+.+
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 3468889999999999999999665 569999999999999999999999 887765
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.95 E-value=0.00068 Score=58.48 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=96.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHH
Q 017940 186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 265 (363)
Q Consensus 186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 265 (363)
..+++++=++.|+..-....+... .|.+......+.+.++.+...++..+ .. +...+..-+..|++-+ ++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p---~~---T~~~~iv~~isG~~Ws-~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSP---EL---TLTIFIVGFISGAFWS-FG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecC---cc---chhhHHHHHHhhhHhh-hh
Confidence 467889999999987776655543 46777777777777776666555321 11 2234555556666655 68
Q ss_pred HHHhhhhcccCCcchhhhhhh-hHHHHHHHHHHHHhCCCCchhhHH----HHHHHHHHhhhheeccc
Q 017940 266 YVGLTWCVKKKGPVFTAAFSP-LVQIMAAMFDIPLLHERLHIGSLL----GSITVIIGLYILLWGKN 327 (363)
Q Consensus 266 ~~~~~~a~~~~~a~~~s~~~~-~~pv~~~~~~~~~~~e~~~~~~~~----G~~li~~g~~l~~~~~~ 327 (363)
+..++++++..+.+++.+++. .+-+-+.+++++.|+|..+..+.+ ..++++.|+++..++++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 999999999999999999854 677788899999999999887763 56778888888777665
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.94 E-value=0.0022 Score=47.81 Aligned_cols=55 Identities=22% Similarity=0.274 Sum_probs=34.0
Q ss_pred HHHHHHHHhhhhcccCCcchhhh-hhhhHHHHHHHHHHHHhCCCCchhhHHHHHHH
Q 017940 261 GSGLCYVGLTWCVKKKGPVFTAA-FSPLVQIMAAMFDIPLLHERLHIGSLLGSITV 315 (363)
Q Consensus 261 ~~~~~~~~~~~a~~~~~a~~~s~-~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li 315 (363)
+...++.++..++|+.+.+.+=. ...+..+...+.+.+++||++|+.+++|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 45678899999999999888744 45699999999999999999999999999875
No 94
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.93 E-value=0.0043 Score=54.93 Aligned_cols=132 Identities=14% Similarity=0.032 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHH
Q 017940 186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 265 (363)
Q Consensus 186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 265 (363)
|.+.+++|+++++...+=.|+.-.. |++....+.+....+..+...+..+. +.+. .+.++ .|.+ -..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~--p~f~------p~aml-gG~l-W~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGF--PPFY------PWAML-GGAL-WATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCC--Ccce------eHHHh-hhhh-hhcC
Confidence 5678889999999998888887655 77777777777766666666555432 1221 11111 1111 2234
Q ss_pred HHHhhhhcccCCcchhhhhh-hhHHHHHHHHHHH-HhCCC---C--chhhHHHHHHHHHHhhhheeccccc
Q 017940 266 YVGLTWCVKKKGPVFTAAFS-PLVQIMAAMFDIP-LLHER---L--HIGSLLGSITVIIGLYILLWGKNKE 329 (363)
Q Consensus 266 ~~~~~~a~~~~~a~~~s~~~-~~~pv~~~~~~~~-~~~e~---~--~~~~~~G~~li~~g~~l~~~~~~~~ 329 (363)
..+-.-.++.++.+..-.+. .++.+.+...+-+ +||+. + ....++|++++++|..++..-|.++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 44445566777666555553 3467777776654 45442 2 6678899999999999887655544
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.85 E-value=0.013 Score=51.96 Aligned_cols=191 Identities=10% Similarity=0.023 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQY 88 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (363)
|++.++++++++|.+++-.|.. + .-|++.+-++......+.-+++...++ .++ -..+.++.|.+ .+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~-~gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~----f~p~amlgG~l-W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-D-TGDGFFFQWVMCSGIFLVGLVVNLILG---FPP----FYPWAMLGGAL-WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-c-CCCcHHHHHHHHHHHHHHHHHHHHhcC---CCc----ceeHHHhhhhh-hhcCce
Confidence 5688999999999999999965 4 257777777666555555555554432 222 24455666777 588999
Q ss_pred HHHHHhhccCccchhhhcch-hhHHHHHHHHH-hCccccccccccCccceehhhHHHHhHHHhhhhcCCCccC-------
Q 017940 89 FFLLGIQYTSATFACAFINM-VPVITFVIALP-FGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD------- 159 (363)
Q Consensus 89 ~~~~al~~~~~~~~~ii~~~-~pv~~~lla~l-~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~------- 159 (363)
+-.-.++.++.+....+-+. +-+.....+.+ +++++..... ..+.-++|++++++|..+...-+.+....
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 99999999999999888665 44555454443 3444333221 22334788888888887776533222110
Q ss_pred CCcchhhhhhhhhc-CCCCC-------CCccchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 017940 160 HSYSQAETAINVMH-MHPTR-------KTERWTFGTIALTVGTLLWASWFPIQSYIGKR 210 (363)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~~~-------~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~ 210 (363)
+....+..+.+... .+.++ ...+...|..+++++++.|+...+=..+..++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 00000001000000 00011 11246689999999999999988877777665
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.18 E-value=0.08 Score=47.50 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=110.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhccCCCC-----cCCHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLE-EGMNELVFITCRLLVATILLAPIGYFWERNSRP-----KLTLRILFCLFFS 78 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 78 (363)
+...|+.++....++=|.....-....+ .++++..+++.-.+...+.-........ ...+ +.+++.++.+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHHH
Confidence 5568999999999988888877776655 2578999999888888887776644332 2222 2356778888888
Q ss_pred HHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhh
Q 017940 79 AIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLY 152 (363)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~ 152 (363)
..++ ..++.+.++-++.-++-.-+.|..+-=++..+++.+.++.+++..| |+|+.+.+.|+.+=.+.
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEILL 314 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHHH
Confidence 8887 7888888888887766666777777888999999999999999999 99999999999876553
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.12 E-value=0.016 Score=44.54 Aligned_cols=109 Identities=13% Similarity=0.088 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHHHHHHHhhh
Q 017940 192 VGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTW 271 (363)
Q Consensus 192 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 271 (363)
+-+++|+..+.+.||..+..++.-. .. + ...-... ++. . |-.. ..++.+..+...|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~-~~-~-~~~~~~~----Ll~----------n---~~y~--ipf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKA-SL-Q-LLQEIKF----LLL----------N---PKYI--IPFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccc-hH-H-HHHHHHH----HHH----------h---HHHH--HHHHHHHHHHHHHHH
Confidence 4478899999999999876432222 11 1 1111111 110 0 1111 122334566777888
Q ss_pred hcccCCcchhhhhh-hhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940 272 CVKKKGPVFTAAFS-PLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL 322 (363)
Q Consensus 272 a~~~~~a~~~s~~~-~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~ 322 (363)
.+.+.+-+.+.++. .+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999999985 8899999999988777788999999999999998764
No 98
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.06 E-value=0.32 Score=44.77 Aligned_cols=141 Identities=13% Similarity=0.067 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccCC---CchhHHHHHHHHHHHHHHHHHHHhcCC--------CcccccccchhHHH
Q 017940 185 FGTIALTVGTLLWASWFPIQSYIGKRYP---CKYSSTAILSLFGAIQAAILCLATNRN--------HSAWSFKGKIEIIS 253 (363)
Q Consensus 185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 253 (363)
.=.+..+...+.++......|+..++.. .|.+..+..-+.-.+++....+..++. ........+.+...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3345555556666777777776665421 345555555556566665555554211 11111112112222
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 254 VLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
+..-++ ...+..-+++.+..+.+|+...+...+..+-+.++..++++++++..||...++.+.|+.++....
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~ 166 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS 166 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence 222222 244555688899999999999999999999999999999999999999999999999999998443
No 99
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.91 E-value=0.11 Score=42.02 Aligned_cols=138 Identities=13% Similarity=0.082 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHH
Q 017940 6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSL 85 (363)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (363)
.....+..+++..+-.....+.....+..-+|+.-.++.+.++.+++..+.+.++++......++.-+|...-|++| ..
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~ 81 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI 81 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence 35667777777777777777777666643359999999999999988888877444332222233344445555554 44
Q ss_pred HHHHHHHHhhccCccchhh-hcchhhHHHHHHHHHhC----ccccccccccCccceehhhHHHHhHHHhh
Q 017940 86 TQYFFLLGIQYTSATFACA-FINMVPVITFVIALPFG----LETVDIKGISGKAKVVGTLVCIGGAMLLT 150 (363)
Q Consensus 86 ~~~~~~~al~~~~~~~~~i-i~~~~pv~~~lla~l~~----~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~ 150 (363)
+-+..........++.... +..-+-+...++-.+=+ +.+++..+ ++|+++.++|+.++.
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r------~lgi~L~l~gil~~~ 145 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPR------ILGILLVLAGILLAR 145 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHH------HHHHHHHHHHHHHhc
Confidence 4433444445555544433 33444444444433321 24455555 999999999955553
No 100
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.55 E-value=0.0066 Score=54.68 Aligned_cols=127 Identities=15% Similarity=0.177 Sum_probs=91.6
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHH
Q 017940 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGI 259 (363)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 259 (363)
..++..|..+++.+++..+...++.|+-.++... ...-..++. ........| +.|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------~~~ra~~gg--~~yl~~~~W----w~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------SGLRAGEGG--YGYLKEPLW----WAGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------hcccccCCC--cchhhhHHH----HHHH
Confidence 4455689999999999999999999987766210 000001111 111111122 3444
Q ss_pred HHHHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccc
Q 017940 260 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM 330 (363)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~ 330 (363)
+...++-.+-+.|-...+++.++++..++.+...+++..+++|+++....+|+.+.++|..+......+++
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 45556666666667778999999999999999999999999999999999999999999988876655543
No 101
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.40 E-value=0.037 Score=48.38 Aligned_cols=60 Identities=7% Similarity=0.025 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHH
Q 017940 83 TSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 148 (363)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l 148 (363)
......+....+++.+....+....+.++++.+++.++++|+++..+ ++|+.+.+.|+.+
T Consensus 162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l 221 (222)
T TIGR00803 162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL 221 (222)
T ss_pred HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence 35666778889999999999999999999999999999999999999 9999998888653
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.16 E-value=1.9 Score=39.23 Aligned_cols=133 Identities=14% Similarity=0.099 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHH--HHHHHHHHHHHHHHHHhcCCCcccccccchhHH--HHHHHHHHH
Q 017940 186 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA--ILSLFGAIQAAILCLATNRNHSAWSFKGKIEII--SVLYAGIVG 261 (363)
Q Consensus 186 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~ 261 (363)
...-++.-+++-.+-.+..|.....++-|..... .+.+.+.+.....-...--+++..+......|. .+++.+-
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~-- 90 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM-- 90 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH--
Confidence 3445555555555566677887777665555444 777776666555444322233333333333343 2233222
Q ss_pred HHHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940 262 SGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 262 ~~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 324 (363)
...-..++++.+.....++...+|+++.+.+..++|.+++...+....++.+|......
T Consensus 91 ----i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 91 ----LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred ----HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 12223689999999999999999999999999999999999999999999999877653
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.97 E-value=0.047 Score=45.70 Aligned_cols=63 Identities=17% Similarity=0.167 Sum_probs=58.0
Q ss_pred HHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 265 CYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 265 ~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
+...|..++++++|+.++.+...+-.+..+++++++|+++...+++..++.+.|++...+..+
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 556788999999999999999999999999999999999999999999999999998886554
No 104
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.35 E-value=0.21 Score=43.12 Aligned_cols=137 Identities=11% Similarity=0.031 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhccCCCC-----cCCHHHHHHHHHHHH
Q 017940 7 WKPLIAMIAVEFGFATVNIFLKKVLEE-GMNELVFITCRLLVATILLAPIGYFWERNSRP-----KLTLRILFCLFFSAI 80 (363)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~ 80 (363)
..|-++++++..+-|+....--..-.. .-+...+++.-.+-+.+.+..-.++... .+. .-.+..|.-+.+.++
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai 249 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAI 249 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHH
Confidence 467788888877777776654433221 1223444555555555544433332211 000 001244666777888
Q ss_pred HHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 81 VGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 81 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
.+ ++++.|.+.-..+-++-.-+++..+--+|+.++++++++.+++.+| |+|..+.+.|...=..
T Consensus 250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADVV 313 (337)
T ss_pred HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHhh
Confidence 85 8999999999999999999999999999999999999999999999 9999999999887543
No 105
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=93.06 E-value=0.79 Score=42.19 Aligned_cols=144 Identities=12% Similarity=0.059 Sum_probs=90.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhc--CCCc-ccccccchhHHHHHHHH
Q 017940 182 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATN--RNHS-AWSFKGKIEIISVLYAG 258 (363)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~g 258 (363)
+...|+++..+++++.+.+.+-.||..+- + ++.......+-+.+..|.....- ++.. .....+...+....+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKGW--S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCCc--c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 34589999999999999999999987543 2 55444444444445555544321 1211 11222333455555666
Q ss_pred HHHHHHHHHHhhhhcccCCcchhh-hhhhhHHHHHHHHHHHHhCC-------CCchhhHHHHHHHHHHhhhheeccccc
Q 017940 259 IVGSGLCYVGLTWCVKKKGPVFTA-AFSPLVQIMAAMFDIPLLHE-------RLHIGSLLGSITVIIGLYILLWGKNKE 329 (363)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~a~~~s-~~~~~~pv~~~~~~~~~~~e-------~~~~~~~~G~~li~~g~~l~~~~~~~~ 329 (363)
++- +++-..|-.++++++.+... +..-+.-+++.++--++.|+ +-....++|.++.++|+.+..+...++
T Consensus 81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 654 36777888899998876543 34555566666665554332 224467899999999999998765443
No 106
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.03 E-value=0.35 Score=41.48 Aligned_cols=136 Identities=14% Similarity=0.176 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhccCCC----CcCCHHHHHHHHHHHHHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLE-EGMNELVFITCRLLVATILLAPIGYFWERNSR----PKLTLRILFCLFFSAIVGT 83 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~ 83 (363)
|++++..-++.-+..-...|...+ .+...+..+++..+.+..+++.+....+.... ..++.....+.++.|++.
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s- 234 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS- 234 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence 555555555655666666665443 24567888999999999999988877654332 224555667788889886
Q ss_pred HHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 84 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+.-.+|-.+.++-++.+..+.+..+.-.-..+-+.++++|+.+... +.++.+++..-.+-..
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav 296 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV 296 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence 5556678888998999999999999988899999999999999998 9999888876666554
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.30 E-value=2.1 Score=32.13 Aligned_cols=112 Identities=17% Similarity=0.228 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCh------HHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940 11 IAMIAVEFGFATVNIFLKKVLEEGMNE------LVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 11 ~~~l~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
.-++...++||....+.|.... +++. -...++|-.-. .-+.|+.+. -+++.-++
T Consensus 6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~t----------------l~l~w~Y~i-PFllNqcg-- 65 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKT----------------LFLNWEYLI-PFLLNQCG-- 65 (125)
T ss_pred HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHH----------------HHHhHHHHH-HHHHHHhh--
Confidence 4567789999999999998765 3431 11222221111 002233332 23334343
Q ss_pred HHHHHHHHHhhccCccchhhh-cchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940 85 LTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 150 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii-~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~ 150 (363)
..+||.-+++.+.+.+..+ +++.-.|+.+.+..+..|....+- ++|..+.++|+.+..
T Consensus 66 --Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 66 --SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLCI 124 (125)
T ss_pred --HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhee
Confidence 4567788999999999877 457888888888876555555555 899999999987653
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=89.62 E-value=3.9 Score=37.05 Aligned_cols=121 Identities=9% Similarity=0.100 Sum_probs=82.1
Q ss_pred HhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc-c-ccccchhHHHHHHHHHHHHHHHHHHhhhhcccCCcchhh
Q 017940 205 SYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSA-W-SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTA 282 (363)
Q Consensus 205 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~a~~~s 282 (363)
+...+..+=|+-.+..+...-..+........+...+. . ........-.+.-.| ++++.-..+-++++++++.+..+
T Consensus 36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta-lata~DIGLSN~sl~yVtlSlYT 114 (349)
T KOG1443|consen 36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA-LATALDIGLSNWSLEYVTLSLYT 114 (349)
T ss_pred hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh-hhhhcccccccceeeeeeeeeee
Confidence 33334444567777776666555544443333321111 1 110111222222344 35677888999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecc
Q 017940 283 AFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 326 (363)
Q Consensus 283 ~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 326 (363)
+.-...+++..+++.++-=|++++.-..=..+|-+|+++..+++
T Consensus 115 M~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 115 MTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred eccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 99999999999999999999999999999999999998887654
No 109
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.32 E-value=1.2 Score=39.61 Aligned_cols=140 Identities=19% Similarity=0.183 Sum_probs=95.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHHHHHHhhccC----CCCcC-CHHHHHHHHHH
Q 017940 6 EWKPLIAMIAVEFGFATVNIFLKKVLEEGMN--ELVFITCRLLVATILLAPIGYFWERN----SRPKL-TLRILFCLFFS 78 (363)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~r~~~~~i~l~~~~~~~~~~----~~~~~-~~~~~~~~~~~ 78 (363)
...|.++.+.+.+.-+.+.+..|..... .. -..++++....+.++++|...+.+.- ..+.. +++-|..+.+.
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~-v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs 261 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPP-VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS 261 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheeccc-ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence 3579999999999999999999976653 33 46788889999999999988765431 11222 56667777888
Q ss_pred HHHHHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhc
Q 017940 79 AIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK 153 (363)
Q Consensus 79 g~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~ 153 (363)
|++|+..++ ....=++.++|-.--+=..--...-.+++..+++|..+... |-+-++.++|-.+-.+.+
T Consensus 262 glfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 262 GLFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHH
Confidence 888744433 11222233444322222222233445678889999999888 999999999988877644
No 110
>PRK02237 hypothetical protein; Provisional
Probab=87.80 E-value=1.5 Score=33.13 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=39.6
Q ss_pred hhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 281 TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 281 ~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
.+...-+-.+.+.++++.+-|++|+.+.++|..+.++|+.+..+..|
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 34456667788889999999999999999999999999988876554
No 111
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=86.52 E-value=0.37 Score=43.37 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHH-HHhcC-C-----Cc----ccccccchhHHHHHHHHH
Q 017940 191 TVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILC-LATNR-N-----HS----AWSFKGKIEIISVLYAGI 259 (363)
Q Consensus 191 l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-----~~----~~~~~~~~~~~~~~~~g~ 259 (363)
+++.+||+..-..+|...++...| +..+|-..++.++...+. +-.+. . .+ +....+...+...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 456788888888777776543222 223444444444333333 32221 1 01 111112222333333444
Q ss_pred HHHHHHHHHhhhhcccCCcchhhhhh-hhHHHHHHHHHHHHhCCCCc--hhhHHHHHHHHHHhhhhee
Q 017940 260 VGSGLCYVGLTWCVKKKGPVFTAAFS-PLVQIMAAMFDIPLLHERLH--IGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~a~~~s~~~-~~~pv~~~~~~~~~~~e~~~--~~~~~G~~li~~g~~l~~~ 324 (363)
..-++..+..+++...+.+..-++. .+..++++.+.| +++.+.+ ..-..|..++++++++-..
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~iLF~GV~cf~iAI~lga~ 146 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAEILFPGVACFLIAIILGAA 146 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCceEEEccHHHHHHHHHHHHH
Confidence 3456788888888888777665553 334444555555 3445443 2455688888888877653
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=86.22 E-value=1.8 Score=32.67 Aligned_cols=46 Identities=15% Similarity=0.291 Sum_probs=39.5
Q ss_pred hhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 282 AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 282 s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
+...-+-.+.+.++++.+-+++|+.+.++|..+.++|+.+..+..|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 4455667788899999999999999999999999999998877654
No 113
>PRK02237 hypothetical protein; Provisional
Probab=86.10 E-value=4.5 Score=30.60 Aligned_cols=52 Identities=12% Similarity=0.106 Sum_probs=41.9
Q ss_pred hhc-cCccch-hhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 94 IQY-TSATFA-CAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 94 l~~-~~~~~~-~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
++- .+.+.+ +.......+...+..+.+-++|++..+ ++|..++++|+.++.+
T Consensus 52 l~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 52 LQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY 105 (109)
T ss_pred cCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence 443 444555 455567888888999999999999999 9999999999998865
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=85.74 E-value=1.1 Score=39.88 Aligned_cols=63 Identities=16% Similarity=0.058 Sum_probs=56.1
Q ss_pred HHHHHHhhhhcccCCcchhhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheec
Q 017940 263 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 325 (363)
Q Consensus 263 ~~~~~~~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 325 (363)
..+-.+.+.++..++|+...++.-...+++-+++..+++.+++..||+|+..+..|++.+...
T Consensus 97 i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 97 IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 345566778888999999999999999999999999999999999999999999999988654
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=84.45 E-value=3.9 Score=30.87 Aligned_cols=53 Identities=13% Similarity=0.171 Sum_probs=43.6
Q ss_pred HhhccCccch-hhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 93 GIQYTSATFA-CAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 93 al~~~~~~~~-~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
.++-.+.+.+ +..-....+...+-.+.+-++|++..+ ++|..++++|+.++.+
T Consensus 50 Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 50 TLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred hcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 3455555555 455668888899999999999999999 9999999999999875
No 116
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=75.08 E-value=53 Score=28.19 Aligned_cols=90 Identities=6% Similarity=0.047 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Q 017940 11 IAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTSLTQYFF 90 (363)
Q Consensus 11 ~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (363)
++..+-+++.|....+.+...+. . ....+..-.+++.+++..+..+..+.... .+++.++..++.++.. .+.+...
T Consensus 88 ~~~~if~~~~gi~~~f~~~~~~~-~-gi~tli~~~i~~G~~~~~~~~~i~~~~~~-~~r~~~~k~~~~~~~~-~~~w~~~ 163 (206)
T PF06570_consen 88 LFFGIFSLLFGIMGFFSPKNSNQ-Y-GIITLILVSIVGGLVFYFIFKYIYPYKKK-KKRPSWWKYILISVLA-MVLWIVI 163 (206)
T ss_pred HHHHHHHHHHHHHHHHhhccccc-c-cHHHHHHHHHHHHHHHHHHHHHHhccccc-ccccHHHHHHHHHHHH-HHHHHHH
Confidence 33344445555555555533221 2 22222333344444444333222221111 2233333444444442 4444555
Q ss_pred HHHhhccCccchhh
Q 017940 91 LLGIQYTSATFACA 104 (363)
Q Consensus 91 ~~al~~~~~~~~~i 104 (363)
+...+.+++...-.
T Consensus 164 ~~~~~~lp~~inp~ 177 (206)
T PF06570_consen 164 FVLTSFLPPVINPV 177 (206)
T ss_pred HHHHHHccccCCcC
Confidence 55556677664433
No 117
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=72.29 E-value=14 Score=27.79 Aligned_cols=31 Identities=10% Similarity=0.071 Sum_probs=23.4
Q ss_pred HHHHHHHHhCccccccccccCccceehhhHHHHhHHH
Q 017940 112 ITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 148 (363)
Q Consensus 112 ~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l 148 (363)
.-..++.+++||++++.+ +.|.++.+.++..
T Consensus 75 vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~f 105 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNY------LWAFLCILGAVYF 105 (108)
T ss_pred eeHHHHHHHhCCCccHHH------HHHHHHHHHhhhe
Confidence 335678889999999998 7777766666554
No 118
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=72.23 E-value=4.2 Score=36.86 Aligned_cols=129 Identities=11% Similarity=0.091 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccC------CCC-------cCCHHHHHHHHHHH
Q 017940 13 MIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERN------SRP-------KLTLRILFCLFFSA 79 (363)
Q Consensus 13 ~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~------~~~-------~~~~~~~~~~~~~g 79 (363)
|+++.++||......|.+-.++-.| +...+-+.++.++..++.-+.... ..+ .-++..+...+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 4577899999999999876543333 234555555555554444332111 111 12566677677777
Q ss_pred HHHHHHHHHHHHHHhhccCccchhhhc-chhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHH
Q 017940 80 IVGTSLTQYFFLLGIQYTSATFACAFI-NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 148 (363)
Q Consensus 80 ~~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l 148 (363)
++ ..+++.+..+|+.+.+.+.+-++. ++.-+....+-++. ..|.++.. ....|+.+.++.+++
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~----iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAE----ILFPGVACFLIAIIL 143 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCce----EEEccHHHHHHHHHH
Confidence 77 689999999999999999887775 35444444444443 44444332 113455555555544
No 119
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=71.85 E-value=23 Score=31.75 Aligned_cols=139 Identities=13% Similarity=0.078 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhccCC--C---CcCCHHHHHHHHHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLE-EGMNELVFITCRLLVATILLAPIGYFWERNS--R---PKLTLRILFCLFFSAIV 81 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~--~---~~~~~~~~~~~~~~g~~ 81 (363)
.|+...-.+-+.-+...-.-..... .+-+...++++.+.++.++++..+.....-. + ...+++...+.++.+..
T Consensus 190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~ 269 (367)
T KOG1582|consen 190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLA 269 (367)
T ss_pred eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHH
Confidence 4555544444544544444433333 2345678888888888888877776543211 1 12356677777776666
Q ss_pred HHHHHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhhhc
Q 017940 82 GTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK 153 (363)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~ 153 (363)
+ .++......=++.-++..++.+...--..+.+++++++..+++.+. .-+..+.+.|+.+=.+++
T Consensus 270 g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 270 G-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred h-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence 4 4444333333444566667777777778899999999999999998 788888889999877655
No 120
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=71.62 E-value=1.1e+02 Score=30.53 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=17.3
Q ss_pred hhhhHHHHHHHHHHHHhCCCCchhh-HHHHHHHHHHhhhh
Q 017940 284 FSPLVQIMAAMFDIPLLHERLHIGS-LLGSITVIIGLYIL 322 (363)
Q Consensus 284 ~~~~~pv~~~~~~~~~~~e~~~~~~-~~G~~li~~g~~l~ 322 (363)
.....|+-+.++|.+.-.-..+... +.|+++++.+++..
T Consensus 352 ~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 352 FFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 3444566666666643322232222 33444444444333
No 121
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=70.95 E-value=66 Score=27.49 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCCchhhHHHHHHHHH--Hhhhheec
Q 017940 293 AMFDIPLLHERLHIGSLLGSITVII--GLYILLWG 325 (363)
Q Consensus 293 ~~~~~~~~~e~~~~~~~~G~~li~~--g~~l~~~~ 325 (363)
-.+|..++.+..=+.+.+|.+|.++ |.....++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~ 167 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARR 167 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3457777888888888888777654 54444443
No 122
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=70.83 E-value=7.7 Score=29.18 Aligned_cols=59 Identities=15% Similarity=0.185 Sum_probs=43.5
Q ss_pred HHHHhhhhcccCCcchhhhh-hhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhhe
Q 017940 265 CYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 265 ~~~~~~~a~~~~~a~~~s~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 323 (363)
+..+|+.-+++.+-+.+..+ ..+.-.++.+.+..+-.|......+.|..++++|+.+..
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 44556666777777777666 445777888888865555667888899999999998753
No 123
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=70.57 E-value=6.2 Score=29.68 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCchhhHHHHHHHHHHhhhh
Q 017940 293 AMFDIPLLHERLHIGSLLGSITVIIGLYIL 322 (363)
Q Consensus 293 ~~~~~~~~~e~~~~~~~~G~~li~~g~~l~ 322 (363)
..++.++++|++++....|.++++.+++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 456778899999999999999999987754
No 124
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=67.80 E-value=21 Score=26.77 Aligned_cols=47 Identities=15% Similarity=0.194 Sum_probs=39.0
Q ss_pred hhhhhhhHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 281 TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 281 ~s~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
.+...-+-.+.+.++.+++=|.+|+.+.++|..+.++|+.++....+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 34456667788889999999999999999999999999888776644
No 125
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=67.04 E-value=1.1e+02 Score=28.72 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=20.2
Q ss_pred CCCchhhHHHHHHHHHHhhhheecccccchhc
Q 017940 302 ERLHIGSLLGSITVIIGLYILLWGKNKEMQNC 333 (363)
Q Consensus 302 e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~ 333 (363)
...+..+-.++..+.++++.....-.-++++.
T Consensus 161 ~~~~~~~s~~~avv~i~~Y~lfL~fql~tH~~ 192 (368)
T COG0387 161 GNFSLGQSLFVAVVLIALYGLFLFFQLKTHAS 192 (368)
T ss_pred CcchHhHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 34557777888888888877764443333333
No 126
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=65.13 E-value=1e+02 Score=28.99 Aligned_cols=8 Identities=0% Similarity=-0.405 Sum_probs=3.8
Q ss_pred HHHHHHHH
Q 017940 228 QAAILCLA 235 (363)
Q Consensus 228 ~~~~~~~~ 235 (363)
+.+|..++
T Consensus 40 ~~lP~liF 47 (385)
T PF03547_consen 40 VFLPALIF 47 (385)
T ss_pred HHHHHHHH
Confidence 44455544
No 127
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.35 E-value=18 Score=26.80 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCCchhhHHHHHHHHHHhhhhee
Q 017940 292 AAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 324 (363)
Q Consensus 292 ~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 324 (363)
-..++.+.++|++.+..+.|..+++.|++...+
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 345778889999999999999999999887653
No 128
>PF15102 TMEM154: TMEM154 protein family
Probab=60.72 E-value=11 Score=30.31 Aligned_cols=24 Identities=13% Similarity=0.264 Sum_probs=13.7
Q ss_pred HHHHHHHHHHhhhheecccccchh
Q 017940 309 LLGSITVIIGLYILLWGKNKEMQN 332 (363)
Q Consensus 309 ~~G~~li~~g~~l~~~~~~~~~~~ 332 (363)
+++++|++..++++.+.|||+.|.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 344555666677776665554433
No 129
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=60.63 E-value=86 Score=28.35 Aligned_cols=133 Identities=14% Similarity=0.177 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHh--hc-----cCC---CCcC---CHHHHH
Q 017940 8 KPLIAMIAVEFGFATVNIFLKKVLE-EGMNELVFITCRLLVATILLAPIGYF--WE-----RNS---RPKL---TLRILF 73 (363)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~--~~-----~~~---~~~~---~~~~~~ 73 (363)
.|+.++.++.+.-+...+.-....+ .|-++-+..|+........++...-- .+ +.+ .+.. -+..|.
T Consensus 164 iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~ 243 (330)
T KOG1583|consen 164 IGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWV 243 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHH
Confidence 4667777777777777776665554 36778888999888887777644310 00 000 0111 122233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc----CccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHh
Q 017940 74 CLFFSAIVGTSLTQYFFLLGIQYT----SATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL 149 (363)
Q Consensus 74 ~~~~~g~~~~~~~~~~~~~al~~~----~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~ 149 (363)
+++. .++.++....+..-+ ++-++++...+-=.+..+++.+.++.++++.. |+|.++.++|.++.
T Consensus 244 yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h------~lGa~lVF~Gt~~f 312 (330)
T KOG1583|consen 244 YLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH------WLGAALVFFGTLLF 312 (330)
T ss_pred HHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH------HHHHHHHHHHHHHH
Confidence 3322 344454444444443 33455677778888999999999999999999 99999999999987
Q ss_pred hh
Q 017940 150 TL 151 (363)
Q Consensus 150 ~~ 151 (363)
..
T Consensus 313 a~ 314 (330)
T KOG1583|consen 313 AN 314 (330)
T ss_pred HH
Confidence 64
No 130
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=59.84 E-value=10 Score=30.24 Aligned_cols=16 Identities=13% Similarity=0.592 Sum_probs=8.7
Q ss_pred hHHHHHHHHHHhhhhe
Q 017940 308 SLLGSITVIIGLYILL 323 (363)
Q Consensus 308 ~~~G~~li~~g~~l~~ 323 (363)
.++|..+.+.|++...
T Consensus 89 ~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 89 IIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3456666666655443
No 131
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=58.14 E-value=15 Score=29.45 Aligned_cols=29 Identities=10% Similarity=0.156 Sum_probs=22.4
Q ss_pred hcccCCcchhhhhhhhHHHHHHHHHHHHh
Q 017940 272 CVKKKGPVFTAAFSPLVQIMAAMFDIPLL 300 (363)
Q Consensus 272 a~~~~~a~~~s~~~~~~pv~~~~~~~~~~ 300 (363)
++..-+...++.+.|+.|.++++++.++.
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777788889999999888887653
No 132
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=57.75 E-value=12 Score=33.19 Aligned_cols=136 Identities=16% Similarity=0.086 Sum_probs=79.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHH
Q 017940 5 NEWKPLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWERNSRPKLTLRILFCLFFSAIVGTS 84 (363)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 84 (363)
|..+|=.++++++-+++.+++.=..... +.|...+...-.+.+.++..+= ....+++...+.|..-....+...+.++
T Consensus 163 np~~GD~lvi~GATlYaVSNv~EEflvk-n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~MF 240 (336)
T KOG2766|consen 163 NPVKGDFLVIAGATLYAVSNVSEEFLVK-NADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALTMF 240 (336)
T ss_pred CCccCcEEEEecceeeeeccccHHHHHh-cCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHHHH
Confidence 4567778888889999999988887777 5888888888788887777655 3344444443444321222222333344
Q ss_pred HHHHHHHHHhhccCccchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhh
Q 017940 85 LTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 150 (363)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~ 150 (363)
+.+.+.=.=++..+++..-+=.-+.-.+..++ ..++-++.+.. .++......|.++-.
T Consensus 241 llYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY------~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 241 LLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLY------FLAFATIATGLIIYS 298 (336)
T ss_pred HHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhh------HHHHHHHHHhhEEee
Confidence 44444333344444432211112223333333 33455688877 888888888877764
No 133
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=57.03 E-value=82 Score=23.75 Aligned_cols=47 Identities=11% Similarity=0.148 Sum_probs=38.6
Q ss_pred ccch-hhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHHhhh
Q 017940 99 ATFA-CAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 99 ~~~~-~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
.+.+ +.......+...+..+.+-+.++++.+ ++|..+|++|+.++..
T Consensus 57 ~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~ 104 (109)
T COG1742 57 FGRVYAAYGGVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF 104 (109)
T ss_pred hhhHHHHhcchHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence 3444 455567788888888889999999999 9999999999888775
No 134
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=55.99 E-value=2.1e+02 Score=28.08 Aligned_cols=24 Identities=13% Similarity=0.270 Sum_probs=19.6
Q ss_pred CchhhHHHHHHHHHHhhhheeccc
Q 017940 304 LHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 304 ~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
++..|++.+.++++|+++..+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 788999999999999887765443
No 135
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=53.74 E-value=10 Score=25.92 Aligned_cols=24 Identities=25% Similarity=0.184 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHhhhheecccccch
Q 017940 308 SLLGSITVIIGLYILLWGKNKEMQ 331 (363)
Q Consensus 308 ~~~G~~li~~g~~l~~~~~~~~~~ 331 (363)
-+++++++++|.+++...++++..
T Consensus 6 iLi~ICVaii~lIlY~iYnr~~~~ 29 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRKKTT 29 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc
Confidence 467888999999988776655443
No 136
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=50.96 E-value=2.1e+02 Score=30.10 Aligned_cols=43 Identities=19% Similarity=0.047 Sum_probs=26.5
Q ss_pred cchhhhcchhhHHHHHHHHHhCccccccccccCccceehhhHHHHhHHH
Q 017940 100 TFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 148 (363)
Q Consensus 100 ~~~~ii~~~~pv~~~lla~l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l 148 (363)
+.+.++..+.|+-.+.++.....+|.+... +.+.+-.++|.+.
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~------~~~~~~~~~G~~t 53 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKA------FFSALGVLLGAIS 53 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchH------HHHHHHHHHHHHH
Confidence 456777888898888888887655532222 4444444455443
No 137
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=48.61 E-value=2.6e+02 Score=27.10 Aligned_cols=14 Identities=14% Similarity=0.102 Sum_probs=8.4
Q ss_pred HHHHHHHHhCcccc
Q 017940 112 ITFVIALPFGLETV 125 (363)
Q Consensus 112 ~~~lla~l~~~e~~ 125 (363)
+..+++.++.+-|.
T Consensus 6 ~~~~~~~~~~g~~~ 19 (433)
T PRK09412 6 LIIVLLAIFLGARL 19 (433)
T ss_pred HHHHHHHHHHhHhh
Confidence 34556666666664
No 138
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=47.33 E-value=42 Score=21.94 Aligned_cols=44 Identities=25% Similarity=0.452 Sum_probs=33.9
Q ss_pred eehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 017940 136 VVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKR 210 (363)
Q Consensus 136 ~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~ 210 (363)
.+|..+.+.|++++..++ .|.+..+++-...|......|+..+.
T Consensus 6 v~G~~lv~~Gii~~~lPG-------------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 6 VLGWVLVVAGIIMLPLPG-------------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hHHHHHHHHHHHhhcCCC-------------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 678888889988877532 46677888888888888888887654
No 139
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=46.87 E-value=2.3e+02 Score=25.98 Aligned_cols=77 Identities=9% Similarity=0.001 Sum_probs=43.2
Q ss_pred eehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHH-------HHHHh-h
Q 017940 136 VVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWF-------PIQSY-I 207 (363)
Q Consensus 136 ~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------i~~k~-~ 207 (363)
+.++.++..|+......-. ...+.....+..+..++.+.+.... +..++ .
T Consensus 7 ~f~~~mGtg~l~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~ 64 (330)
T PF03595_consen 7 WFGMVMGTGGLSNLLYLLP----------------------YHFGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAF 64 (330)
T ss_dssp GGHHHHHHHHHHHHHHTTT----------------------TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----------------------HhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 7888999888888764111 1123444567777777777766622 22222 2
Q ss_pred hccCCCchhHHHHHHHHHHHHHHHHHH
Q 017940 208 GKRYPCKYSSTAILSLFGAIQAAILCL 234 (363)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (363)
.++..||....++.....+...+....
T Consensus 65 ~~el~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 65 KAELRHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp HHHHHSTTGGGGGGHHHHHHHHHHHHH
T ss_pred HHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 233346677666666655555444333
No 140
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=44.92 E-value=19 Score=28.56 Aligned_cols=26 Identities=15% Similarity=0.130 Sum_probs=18.3
Q ss_pred ccCCcchhhhhhhhHHHHHHHHHHHH
Q 017940 274 KKKGPVFTAAFSPLVQIMAAMFDIPL 299 (363)
Q Consensus 274 ~~~~a~~~s~~~~~~pv~~~~~~~~~ 299 (363)
......+.+.+.|+-|++.++++.++
T Consensus 63 ~~~~~~~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 63 PESSLLKAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567777888888888888754
No 141
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=44.19 E-value=1.8e+02 Score=28.19 Aligned_cols=12 Identities=8% Similarity=0.039 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q 017940 10 LIAMIAVEFGFA 21 (363)
Q Consensus 10 ~~~~l~~~~~~~ 21 (363)
+.....+.+.++
T Consensus 18 w~i~~~~~~~~~ 29 (455)
T TIGR00892 18 WVVLGATFVSIG 29 (455)
T ss_pred hHHHHHHHHHHH
Confidence 333333333333
No 142
>PHA03049 IMV membrane protein; Provisional
Probab=43.78 E-value=18 Score=24.58 Aligned_cols=23 Identities=30% Similarity=0.218 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHhhhheecccccc
Q 017940 308 SLLGSITVIIGLYILLWGKNKEM 330 (363)
Q Consensus 308 ~~~G~~li~~g~~l~~~~~~~~~ 330 (363)
-+++++++++|.+++...++++.
T Consensus 6 ~l~iICVaIi~lIvYgiYnkk~~ 28 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNKKTT 28 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc
Confidence 46778888889888876665543
No 143
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=43.08 E-value=96 Score=25.47 Aligned_cols=51 Identities=10% Similarity=0.099 Sum_probs=31.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhc-----cCCCchhHHHHHHHHHHHHHHHH
Q 017940 182 RWTFGTIALTVGTLLWASWFPIQSYIGK-----RYPCKYSSTAILSLFGAIQAAIL 232 (363)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 232 (363)
+.......++.+++.|++..++..-..+ +.|.|..-..+..+.+.+.++.+
T Consensus 129 ~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaF 184 (193)
T COG4657 129 NFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAF 184 (193)
T ss_pred hHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHH
Confidence 3446678888888888888777544433 33445555555555555555443
No 144
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=42.38 E-value=2.5e+02 Score=24.94 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=25.1
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhhhccC
Q 017940 180 TERWTFGTIALTVGTLLWASWFPIQSYIGKRY 211 (363)
Q Consensus 180 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~ 211 (363)
......|.+++......||.=..-.|+..+..
T Consensus 123 ~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktk 154 (243)
T KOG1623|consen 123 RRVSVLGIVCAVFNISMFAAPLSVIRKVIKTK 154 (243)
T ss_pred eeeeeeehhhhhhhHHhhhccHHhhhhheecC
Confidence 33455899999999999988888788877663
No 145
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=36.54 E-value=33 Score=21.00 Aligned_cols=19 Identities=26% Similarity=0.938 Sum_probs=12.5
Q ss_pred HHHHHHHHHhhhheecccc
Q 017940 310 LGSITVIIGLYILLWGKNK 328 (363)
Q Consensus 310 ~G~~li~~g~~l~~~~~~~ 328 (363)
+|.++++.+.+++.|++|+
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 4666777777777665544
No 146
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=35.98 E-value=2.4e+02 Score=23.08 Aligned_cols=117 Identities=13% Similarity=0.150 Sum_probs=60.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcc----CCCCc------CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc---
Q 017940 35 MNELVFITCRLLVATILLAPIGYFWER----NSRPK------LTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATF--- 101 (363)
Q Consensus 35 ~~~~~~~~~r~~~~~i~l~~~~~~~~~----~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~--- 101 (363)
++|.++.+.....-....+.+..-... +++|+ .+++.+......|+.........++.....-+...
T Consensus 4 l~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~~~~ 83 (182)
T PF00689_consen 4 LTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDEETN 83 (182)
T ss_dssp S-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSSHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 567788887776665544444431100 01122 56778888888888766666666666666322222
Q ss_pred ------hhhhcchhhHHHHHHHHHhCccccc---c--ccccCccceehhhHHHHhHHHhhh
Q 017940 102 ------ACAFINMVPVITFVIALPFGLETVD---I--KGISGKAKVVGTLVCIGGAMLLTL 151 (363)
Q Consensus 102 ------~~ii~~~~pv~~~lla~l~~~e~~~---~--~~~~~~~~~~gi~~~~~Gv~l~~~ 151 (363)
+.......-++..++-.+..|.+-+ . ..+.++..+.+++.+++..+++.+
T Consensus 84 ~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~ 144 (182)
T PF00689_consen 84 NDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVY 144 (182)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhc
Confidence 4444444445555555555554211 1 112344555666655555555543
No 147
>PRK10666 ammonium transporter; Provisional
Probab=35.46 E-value=4.3e+02 Score=25.70 Aligned_cols=52 Identities=10% Similarity=-0.087 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhc
Q 017940 185 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATN 237 (363)
Q Consensus 185 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (363)
...++.+++++..-......|+.. +.+||..........+..-.+...++..
T Consensus 305 ~A~iiG~vag~v~~~~~~~l~~~~-~iDD~~~a~~vHgv~Gi~G~l~~glfa~ 356 (428)
T PRK10666 305 GALIIGVVAGLAGLWGVTMLKRWL-RVDDPCDVFGVHGVCGIVGCILTGIFAA 356 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CCCCCcCccHhhhHhHHHHHHHHHHhhc
Confidence 445666666665544333334322 3357777777776666666555555543
No 148
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=34.60 E-value=61 Score=27.88 Aligned_cols=47 Identities=21% Similarity=0.334 Sum_probs=29.9
Q ss_pred CcchhhhhhhhHHHHHHHHHHHHhCCCCc-hhhHHH-HHHHHHHhhhhe
Q 017940 277 GPVFTAAFSPLVQIMAAMFDIPLLHERLH-IGSLLG-SITVIIGLYILL 323 (363)
Q Consensus 277 ~a~~~s~~~~~~pv~~~~~~~~~~~e~~~-~~~~~G-~~li~~g~~l~~ 323 (363)
.+...+.+..+.|..+..++..+-+-.+. ..+++| .++++.|.....
T Consensus 32 ~~l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 32 SNLIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIY 80 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 34556666777888888888765543333 345655 566667877664
No 149
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=34.58 E-value=2.8e+02 Score=23.42 Aligned_cols=92 Identities=11% Similarity=0.132 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-CCCCcCCHHHHHHHHHHHHHHHHHHH
Q 017940 9 PLIAMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYFWER-NSRPKLTLRILFCLFFSAIVGTSLTQ 87 (363)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (363)
+.+..-+.+++-|.+..+.+.+...|+ ..+ ..-.+++...++....+..+ +.-...+...|+ .++..... .+-+
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~~Gl--Itl-ll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K-~~lv~~~s-m~lW 175 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQVYGL--ITL-LLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWK-YLLVAVLS-MLLW 175 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcchhH--HHH-HHHHHhhhHHHHHHHHHHHHhhcccccCCchHH-HHHHHHHH-HHHH
Confidence 556666677888888888887543232 222 22233333333333222211 111111112222 33333332 4445
Q ss_pred HHHHHHhhccCccchhhh
Q 017940 88 YFFLLGIQYTSATFACAF 105 (363)
Q Consensus 88 ~~~~~al~~~~~~~~~ii 105 (363)
.+.+.+-.++|++.--.+
T Consensus 176 i~v~i~t~~lPtslN~~L 193 (226)
T COG4858 176 IAVMIATVFLPTSLNPQL 193 (226)
T ss_pred HHHHHHHhhCCCcCCcCC
Confidence 555677777887755433
No 150
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=33.61 E-value=40 Score=26.32 Aligned_cols=46 Identities=17% Similarity=0.285 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCCchhhHHHHHHHHHHhhhheecccccchhccccccchhhhhhc
Q 017940 290 IMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNCVSKVTQEAEDIKE 346 (363)
Q Consensus 290 v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (363)
+..+++++ ++|++++++.++...++++|+.+....-.+++++.+.+
T Consensus 66 i~~Ii~gv-----------~aGvIg~Illi~y~irR~~Kk~~~~~~p~P~~~d~~~p 111 (122)
T PF01102_consen 66 IIGIIFGV-----------MAGVIGIILLISYCIRRLRKKSSSDVQPLPEEDDTDVP 111 (122)
T ss_dssp HHHHHHHH-----------HHHHHHHHHHHHHHHHHHS-------------------
T ss_pred eeehhHHH-----------HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCC
No 151
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=32.52 E-value=87 Score=21.01 Aligned_cols=18 Identities=33% Similarity=0.661 Sum_probs=15.4
Q ss_pred ceehhhHHHHhHHHhhhh
Q 017940 135 KVVGTLVCIGGAMLLTLY 152 (363)
Q Consensus 135 ~~~gi~~~~~Gv~l~~~~ 152 (363)
|++|+++.+.|+.++.+.
T Consensus 1 kiigi~Llv~GivLl~~G 18 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYFG 18 (59)
T ss_pred CeeeehHHHHHHHHHHhh
Confidence 389999999999998863
No 152
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=31.90 E-value=3.1e+02 Score=26.67 Aligned_cols=129 Identities=12% Similarity=0.107 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHH---HHHHHHHH----
Q 017940 190 LTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISV---LYAGIVGS---- 262 (363)
Q Consensus 190 ~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~---- 262 (363)
..+-.+.|++.-.+...+.++ .+|-..+....+.++++.+.+.... ..+... ..-|.+-+
T Consensus 70 ~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gfs~------------s~~~~~~l~~lng~fQg~Gwp 136 (448)
T COG2271 70 GSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGFSP------------SLFLFAVLWVLNGWFQGMGWP 136 (448)
T ss_pred HHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhhhh------------HHHHHHHHHHHHHHHhcCCCc
Confidence 334457788888888777777 4666666665555555554443321 011111 11111100
Q ss_pred HHHHHHhhhhcccCCcchh-------hhhhhhHHHHHHHHHHHHhC-CCCchhhHHHHHHHHHHhhhheecccccchh
Q 017940 263 GLCYVGLTWCVKKKGPVFT-------AAFSPLVQIMAAMFDIPLLH-ERLHIGSLLGSITVIIGLYILLWGKNKEMQN 332 (363)
Q Consensus 263 ~~~~~~~~~a~~~~~a~~~-------s~~~~~~pv~~~~~~~~~~~-e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~ 332 (363)
..+-.+..+--++..=... ++=..+.|.++.+ +++.++ ..-.....-|++.+++|+++..+.+.++++.
T Consensus 137 p~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~ 213 (448)
T COG2271 137 PCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE 213 (448)
T ss_pred HHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 0011111122222222212 2223445555544 555444 3334445678888999998887766655443
No 153
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=31.12 E-value=72 Score=18.13 Aligned_cols=16 Identities=25% Similarity=0.260 Sum_probs=8.3
Q ss_pred chhhHHHHHHHHHHhh
Q 017940 305 HIGSLLGSITVIIGLY 320 (363)
Q Consensus 305 ~~~~~~G~~li~~g~~ 320 (363)
+...++|.+++..+.+
T Consensus 11 ~~~~~~G~~l~~~~~~ 26 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGL 26 (34)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555667744444333
No 154
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=31.02 E-value=55 Score=25.56 Aligned_cols=17 Identities=29% Similarity=0.522 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017940 252 ISVLYAGIVGSGLCYVG 268 (363)
Q Consensus 252 ~~~~~~g~~~~~~~~~~ 268 (363)
..++..|++.+.++|.+
T Consensus 57 ~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 57 VVILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHHhhHhheeeEee
Confidence 34455566656555554
No 155
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=30.08 E-value=1.8e+02 Score=23.74 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=45.3
Q ss_pred eehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccCC--C
Q 017940 136 VVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP--C 213 (363)
Q Consensus 136 ~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~--~ 213 (363)
-++++.+++|.=++...+--+. ..+...|..|..+.+++.+.-+......-.+.++.. -
T Consensus 92 slAVV~AIFGLElLmvSQvcEd-------------------~~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vtl~ 152 (184)
T PF15108_consen 92 SLAVVVAIFGLELLMVSQVCED-------------------AHSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVTLI 152 (184)
T ss_pred HHHHHHHHHhHHHHHHHHHHhc-------------------chhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchhhh
Confidence 3556677788776665432111 234667788988888877776655444433333321 3
Q ss_pred chhHHHHHHHHHHHHHH
Q 017940 214 KYSSTAILSLFGAIQAA 230 (363)
Q Consensus 214 ~~~~~~~~~~~~~~~~~ 230 (363)
.+++++|.-+.+..+..
T Consensus 153 GFTL~fWCeFtAsFLfF 169 (184)
T PF15108_consen 153 GFTLMFWCEFTASFLFF 169 (184)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 47778887777665543
No 156
>PF11446 DUF2897: Protein of unknown function (DUF2897); InterPro: IPR021550 This is a bacterial family of uncharacterised proteins.
Probab=29.62 E-value=25 Score=23.19 Aligned_cols=12 Identities=25% Similarity=0.431 Sum_probs=5.1
Q ss_pred HHHHHHHhhhhe
Q 017940 312 SITVIIGLYILL 323 (363)
Q Consensus 312 ~~li~~g~~l~~ 323 (363)
++++++|+++.+
T Consensus 8 IIviVlgvIigN 19 (55)
T PF11446_consen 8 IIVIVLGVIIGN 19 (55)
T ss_pred HHHHHHHHHHhH
Confidence 344444444433
No 157
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=28.78 E-value=5.1e+02 Score=24.56 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHH--HhhhccCCCchhHHHHHHH
Q 017940 192 VGTLLWASWFPIQ--SYIGKRYPCKYSSTAILSL 223 (363)
Q Consensus 192 ~a~~~~a~~~i~~--k~~~~~~~~~~~~~~~~~~ 223 (363)
++.+.++...+.. +.+.++..+|+-.......
T Consensus 47 ~~~i~~~~~~~v~hAe~lA~~~GeP~GtliLtls 80 (366)
T PRK10599 47 LIGILSSAFSVVRHADVLAHRLGEPYGSLILSLS 80 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHH
Confidence 3345555544442 2334444566655444333
No 158
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.86 E-value=78 Score=24.06 Aligned_cols=31 Identities=13% Similarity=-0.097 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHhCC-CCchhhHHHHHHHHHH
Q 017940 288 VQIMAAMFDIPLLHE-RLHIGSLLGSITVIIG 318 (363)
Q Consensus 288 ~pv~~~~~~~~~~~e-~~~~~~~~G~~li~~g 318 (363)
..++++.++|++=+- .=++|-++...++-.|
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 445566666643111 1144445544444333
No 159
>PF08229 SHR3_chaperone: ER membrane protein SH3 ; InterPro: IPR013248 This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) []. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=27.72 E-value=23 Score=30.20 Aligned_cols=11 Identities=27% Similarity=0.640 Sum_probs=5.8
Q ss_pred HHHHHHhhhhe
Q 017940 313 ITVIIGLYILL 323 (363)
Q Consensus 313 ~li~~g~~l~~ 323 (363)
+++++|+++..
T Consensus 141 ~~~LvGVLvLQ 151 (196)
T PF08229_consen 141 ALVLVGVLVLQ 151 (196)
T ss_pred HHHHHHHHHHH
Confidence 44555555554
No 160
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=26.91 E-value=21 Score=32.00 Aligned_cols=52 Identities=6% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHhhccCccchhhhcchhhHHHHHHHH-HhCccccc-cccccCccceehhhHHHHhHHH
Q 017940 91 LLGIQYTSATFACAFINMVPVITFVIAL-PFGLETVD-IKGISGKAKVVGTLVCIGGAML 148 (363)
Q Consensus 91 ~~al~~~~~~~~~ii~~~~pv~~~lla~-l~~~e~~~-~~~~~~~~~~~gi~~~~~Gv~l 148 (363)
|.-++-.+-+-.+++++...+.++++-. +++|+|+- +.. .+.+++.++-+.+
T Consensus 41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLG------lLCiilimi~lLv 94 (381)
T PF05297_consen 41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLG------LLCIILIMIVLLV 94 (381)
T ss_dssp ------------------------------------------------------------
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcch------HHHHHHHHHHHHH
Confidence 3344445555556666554444443333 33555543 444 5555555444333
No 161
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=25.99 E-value=38 Score=27.67 Aligned_cols=26 Identities=8% Similarity=0.137 Sum_probs=15.6
Q ss_pred ccCCcchhhhhhhhHHHHHHHHHHHH
Q 017940 274 KKKGPVFTAAFSPLVQIMAAMFDIPL 299 (363)
Q Consensus 274 ~~~~a~~~s~~~~~~pv~~~~~~~~~ 299 (363)
..-...+.+.+.|+-|++.++.+..+
T Consensus 70 ~e~~llkaa~lvYllPLl~li~ga~l 95 (154)
T PRK10862 70 AEGSLLRSALLVYMTPLVGLFLGAAL 95 (154)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344456666677777777766543
No 162
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=25.88 E-value=36 Score=24.89 Aligned_cols=19 Identities=37% Similarity=0.609 Sum_probs=13.1
Q ss_pred chhhHHHHHHHHHHhhhhe
Q 017940 305 HIGSLLGSITVIIGLYILL 323 (363)
Q Consensus 305 ~~~~~~G~~li~~g~~l~~ 323 (363)
+...++|.++.++|..+..
T Consensus 3 N~~Fl~~l~lliig~~~~v 21 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFV 21 (92)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3455778888887777665
No 163
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=25.56 E-value=40 Score=20.91 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=9.3
Q ss_pred CchhhHHHHHHHHHHhh
Q 017940 304 LHIGSLLGSITVIIGLY 320 (363)
Q Consensus 304 ~~~~~~~G~~li~~g~~ 320 (363)
|++..++-.++++.|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 45555555555555553
No 164
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=24.98 E-value=53 Score=25.58 Aligned_cols=27 Identities=11% Similarity=0.073 Sum_probs=14.9
Q ss_pred HHHhCCCCchhhHH----HHHHHHHHhhhhe
Q 017940 297 IPLLHERLHIGSLL----GSITVIIGLYILL 323 (363)
Q Consensus 297 ~~~~~e~~~~~~~~----G~~li~~g~~l~~ 323 (363)
|++--|..++|.+. .++++++|+++..
T Consensus 25 W~fR~ED~tpWNysiL~Ls~vvlvi~~~LLg 55 (125)
T PF15048_consen 25 WFFRVEDATPWNYSILALSFVVLVISFFLLG 55 (125)
T ss_pred HheecCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 34456777776542 3444555655554
No 165
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.85 E-value=6.5e+02 Score=24.47 Aligned_cols=60 Identities=15% Similarity=-0.010 Sum_probs=35.4
Q ss_pred HhCccccccccccCccceehhhHHHHhHHHhhhhcCCCccCCCcchhhhhhhhhcCCCCCCCccchhhHHHHHHHHHHHH
Q 017940 119 PFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWA 198 (363)
Q Consensus 119 l~~~e~~~~~~~~~~~~~~gi~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 198 (363)
++-|.|+++.| ..++|+.++++=+.+++..+ +...+..+.+.|+.|-.
T Consensus 317 ~~~~~~iHpiQ----Y~LVGlAl~lFYlLLLSlSE----------------------------hi~F~~AYliAa~a~i~ 364 (430)
T PF06123_consen 317 LLSKLRIHPIQ----YLLVGLALVLFYLLLLSLSE----------------------------HIGFNLAYLIAALACIG 364 (430)
T ss_pred HHhcCcccHHH----HHHHHHHHHHHHHHHHHHHh----------------------------hhchHHHHHHHHHHHHH
Confidence 34566777776 33455555555555555522 11245566667777777
Q ss_pred HHHHHHHhhhcc
Q 017940 199 SWFPIQSYIGKR 210 (363)
Q Consensus 199 ~~~i~~k~~~~~ 210 (363)
+-..+.+...+.
T Consensus 365 Li~~Y~~~vl~~ 376 (430)
T PF06123_consen 365 LISLYLSSVLKS 376 (430)
T ss_pred HHHHHHHHHHhc
Confidence 777777777665
No 166
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=22.79 E-value=4.5e+02 Score=21.89 Aligned_cols=32 Identities=19% Similarity=0.145 Sum_probs=15.6
Q ss_pred HHhhhccCCCchhHHHHHHHHHHHHHHHHHHHh
Q 017940 204 QSYIGKRYPCKYSSTAILSLFGAIQAAILCLAT 236 (363)
Q Consensus 204 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (363)
.|+..+| .+-.....+......+......+..
T Consensus 121 ~~~~~~R-~~~i~ag~~v~l~~~~~~l~~~l~~ 152 (194)
T PF07698_consen 121 VRRIRSR-SDIIKAGLLVGLVNALMILALGLIQ 152 (194)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555 3434444555555554444444443
No 167
>PF15471 TMEM171: Transmembrane protein family 171
Probab=22.20 E-value=85 Score=28.00 Aligned_cols=24 Identities=21% Similarity=0.469 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHHhhhheeccccc
Q 017940 306 IGSLLGSITVIIGLYILLWGKNKE 329 (363)
Q Consensus 306 ~~~~~G~~li~~g~~l~~~~~~~~ 329 (363)
..|+.|-+++++|+.......-|+
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKK 184 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKK 184 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeee
Confidence 468999999999988776554443
No 168
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=20.97 E-value=2.4e+02 Score=19.99 Aligned_cols=46 Identities=7% Similarity=0.196 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHh
Q 017940 12 AMIAVEFGFATVNIFLKKVLEEGMNELVFITCRLLVATILLAPIGYF 58 (363)
Q Consensus 12 ~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~ 58 (363)
+.+++.+.|.....+.+--.. .+....+.+.-+.+..++++.+..+
T Consensus 25 LtvLs~~~w~iWw~~f~d~P~-sieSIALl~~~~AfsgLL~lHLvv~ 70 (77)
T PF12292_consen 25 LTVLSVLSWPIWWFFFRDTPT-SIESIALLFFCFAFSGLLFLHLVVF 70 (77)
T ss_pred HHHHHHHHHHHHHHHHcCCcc-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667778888888887775433 3666777777777777766665443
No 169
>COG4147 DhlC Predicted symporter [General function prediction only]
Probab=20.85 E-value=3.2e+02 Score=26.93 Aligned_cols=59 Identities=8% Similarity=0.076 Sum_probs=35.1
Q ss_pred hhhhcccCCcchhhhhhhhHHHHHHHHHHHHh------------CCCCchhhHHHHHHHHHHhhhheeccc
Q 017940 269 LTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLL------------HERLHIGSLLGSITVIIGLYILLWGKN 327 (363)
Q Consensus 269 ~~~a~~~~~a~~~s~~~~~~pv~~~~~~~~~~------------~e~~~~~~~~G~~li~~g~~l~~~~~~ 327 (363)
|-+-..+.++..........-++-++++-.+. +-+++.....|+.+-+++..+.+.-.+
T Consensus 439 fWKr~n~~GAi~G~~~GL~~tlv~i~l~~~i~~~~~~~~~~~~~~~~~~~~g~~sipv~F~~~~ivSllt~ 509 (529)
T COG4147 439 FWKRLNTAGAIAGMLLGLIVTLVLIILSPTIWVVILGHPGFGWAGFPYEGPGLFSIPVGFLGAWIVSLLTK 509 (529)
T ss_pred HHhhccHHhHHHHHHHHHHHHHHHHHhCccccccccCccccccccCCCCCcchhhhhHHHHHhHheeccCC
Confidence 33444444555555555555555555444322 345677788888888888888875443
No 170
>PF15345 TMEM51: Transmembrane protein 51
Probab=20.75 E-value=56 Score=28.49 Aligned_cols=22 Identities=14% Similarity=0.321 Sum_probs=15.4
Q ss_pred HHHHHHHHHhhhheecccccch
Q 017940 310 LGSITVIIGLYILLWGKNKEMQ 331 (363)
Q Consensus 310 ~G~~li~~g~~l~~~~~~~~~~ 331 (363)
.|++|.++.+++..+.|+|+++
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq 88 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQ 88 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4778888888887776665443
No 171
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=20.32 E-value=80 Score=22.19 Aligned_cols=9 Identities=22% Similarity=0.254 Sum_probs=3.6
Q ss_pred HHHHHHHHH
Q 017940 310 LGSITVIIG 318 (363)
Q Consensus 310 ~G~~li~~g 318 (363)
+|+.+++..
T Consensus 10 ~Gm~iVF~~ 18 (79)
T PF04277_consen 10 IGMGIVFLV 18 (79)
T ss_pred HHHHHHHHH
Confidence 344444433
No 172
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=20.23 E-value=6.1e+02 Score=22.47 Aligned_cols=18 Identities=28% Similarity=0.464 Sum_probs=12.7
Q ss_pred hhhHHHHHHHHHHhhhhe
Q 017940 306 IGSLLGSITVIIGLYILL 323 (363)
Q Consensus 306 ~~~~~G~~li~~g~~l~~ 323 (363)
.-..+|..+-+.=..++-
T Consensus 188 ipN~iG~~l~~~QL~Ly~ 205 (243)
T KOG1623|consen 188 IPNVLGFLLGLIQLILYF 205 (243)
T ss_pred cccHHHHHHHHHHHHHhh
Confidence 344578888888777773
No 173
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=20.18 E-value=7.9e+02 Score=23.70 Aligned_cols=48 Identities=6% Similarity=-0.008 Sum_probs=23.1
Q ss_pred HHHHHHHH-HHHHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHHHHh
Q 017940 187 TIALTVGT-LLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLAT 236 (363)
Q Consensus 187 ~~~~l~a~-~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (363)
.++.++++ +|+-....+.|++ +. +|+...-......+..-.+...++.
T Consensus 284 ~iiGii~g~i~~~a~~~lk~~l-~~-DD~ld~f~vHGvgGi~G~i~~GiFa 332 (409)
T COG0004 284 LIIGLIAGVICYFAVKLLKKKL-GV-DDALDVFGVHGVGGIVGAILTGIFA 332 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CC-CCcccceeccchhhHHHHHHHHHhc
Confidence 44544444 4444433344333 32 4666655555555555555555553
Done!