BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017943
(363 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1A4L|A Chain A, Ada Structure Complexed With Deoxycoformycin At Ph 7.0
pdb|1A4L|B Chain B, Ada Structure Complexed With Deoxycoformycin At Ph 7.0
pdb|1A4L|C Chain C, Ada Structure Complexed With Deoxycoformycin At Ph 7.0
pdb|1A4L|D Chain D, Ada Structure Complexed With Deoxycoformycin At Ph 7.0
pdb|1A4M|A Chain A, Ada Structure Complexed With Purine Riboside At Ph 7.0
pdb|1A4M|B Chain B, Ada Structure Complexed With Purine Riboside At Ph 7.0
pdb|1A4M|C Chain C, Ada Structure Complexed With Purine Riboside At Ph 7.0
pdb|1A4M|D Chain D, Ada Structure Complexed With Purine Riboside At Ph 7.0
pdb|1ADD|A Chain A, A Pre-Transition State Mimic Of An Enzyme: X-Ray Structure
Of Adenosine Deaminase With Bound 1-Deaza-Adenosine And
Zinc-Activated Water
pdb|3MVT|A Chain A, Crystal Structure Of Apo Mada At 2.2a Resolution
pdb|3MVT|C Chain C, Crystal Structure Of Apo Mada At 2.2a Resolution
pdb|3MVI|A Chain A, Crystal Structure Of Holo Mada At 1.6 A Resolution
pdb|3MVI|B Chain B, Crystal Structure Of Holo Mada At 1.6 A Resolution
Length = 349
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + ++G+ + +D + ++I M SL FD
Sbjct: 7 PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 63
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 64 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 104
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N G + I VR +L R + + ++E +
Sbjct: 105 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 163
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL+G+ T E ++ P A + A + G+ T+H GE+ + E ++
Sbjct: 164 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 222
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+GH E+E + +L + E+C S+ T H V
Sbjct: 223 EAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 282
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L TDD +F +++ +Y + E +L +A K F
Sbjct: 283 DKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 331
>pdb|2ADA|A Chain A, Atomic Structure Of Adenosine Deaminase Complexed With A
Transition-State Analog: Understanding Catalysis And
Immunodeficiency Mutations
Length = 352
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + ++G+ + +D + ++I M SL FD
Sbjct: 10 PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 66
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 67 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 107
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N G + I VR +L R + + ++E +
Sbjct: 108 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 166
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL+G+ T E ++ P A + A + G+ T+H GE+ + E ++
Sbjct: 167 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 225
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+GH E+E + +L + E+C S+ T H V
Sbjct: 226 EAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 285
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L TDD +F +++ +Y + E +L +A K F
Sbjct: 286 DKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 334
>pdb|1FKW|A Chain A, Murine Adenosine Deaminase (D295e)
Length = 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + ++G+ + +D + ++I M SL FD
Sbjct: 7 PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 63
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 64 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 104
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N G + I VR +L R + + ++E +
Sbjct: 105 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 163
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL+G+ T E ++ P A + A + G+ T+H GE+ + E ++
Sbjct: 164 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 222
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+GH E+E + +L + E+C S+ T H V
Sbjct: 223 EAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 282
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L T+D +F +++ +Y + E +L +A K F
Sbjct: 283 DKANYSLNTEDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 331
>pdb|3KM8|A Chain A, Crystal Structuore Of Adenosine Deaminase From Mus
Musculus Complexed With 9-Deazainosine
pdb|3KM8|B Chain B, Crystal Structuore Of Adenosine Deaminase From Mus
Musculus Complexed With 9-Deazainosine
Length = 352
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + ++G+ + +D + ++I M SL FD
Sbjct: 10 PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 66
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 67 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 107
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N G + I VR +L R + + ++E +
Sbjct: 108 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 166
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL+G+ T E ++ P A + A + G+ T+H G++ + E ++
Sbjct: 167 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGQVGSPEVVR 225
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+GH E+E + +L + E+C S+ T H V
Sbjct: 226 EAVDILKTERVGHGEHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 285
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L TDD +F +++ +Y + E +L +A K F
Sbjct: 286 DKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 334
>pdb|1NDV|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr117016
pdb|1NDW|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr221647
pdb|1NDY|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr230513
pdb|1NDZ|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr235999
pdb|1O5R|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With A
Potent Inhibitor
pdb|1UML|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With A
Potent Inhibitor Fr233624
pdb|1V79|A Chain A, Crystal Structures Of Adenosine Deaminase Complexed With
Potent Inhibitors
pdb|1V7A|A Chain A, Crystal Structures Of Adenosine Deaminase Complexed With
Potent Inhibitors
pdb|1VFL|A Chain A, Adenosine Deaminase
pdb|1WXY|A Chain A, Crystal Structure Of Adenosine Deaminase Ligated With A
Potent Inhibitor
pdb|1WXZ|A Chain A, Crystal Structure Of Adenosine Deaminase Ligated With A
Potent Inhibitor
pdb|2E1W|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Potent Inhibitors
pdb|2Z7G|A Chain A, Crystal Structure Of Adenosine Deaminase Ligated With Ehna
Length = 356
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 38/365 (10%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + +G+ + +D ++++I M +L + FD
Sbjct: 9 PKVELHVHLDGAIKPETILYYGK---RRGIALPADTPEELQNIIGMDKPLTLPDFLAKFD 65
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ + + RI E VE A + +VY+E+R +P + SK
Sbjct: 66 YYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSP---HLLANSK------------ 110
Query: 122 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKL 181
V + + A + V+ N G R + VR +L R + + ++ E V+L
Sbjct: 111 -VEPIPWNQAEGDLTPDEVVSLVNQG-LQEGERDFGVKVRSILCCMRHQPSWSS-EVVEL 167
Query: 182 ALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQSM 237
+ R+ VV IDL+G+ T E ++ P A A + G+ T+H GE+ + ++
Sbjct: 168 CKKYREQTVVAIDLAGDETI-EGSSLFPGHVQAYAEAVKSGVHRTVHAGEVGSANVVKEA 226
Query: 238 LDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQ 294
+D L +R+GH E+ + +L+ + EIC S+ T H + Q
Sbjct: 227 VDTLKTERLGHGYHTLEDTTLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQ 286
Query: 295 HPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLKEIF 354
L TDD +F +++ +Y + E +L +A K F +++ KE+
Sbjct: 287 VNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP---EDEKKELL 343
Query: 355 DLAEK 359
DL K
Sbjct: 344 DLLYK 348
>pdb|2BGN|E Chain E, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|F Chain F, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|G Chain G, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|H Chain H, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
Length = 363
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 38/365 (10%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEH-----VIMKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + +G+ + +D + M +L + FD
Sbjct: 10 PKVELHVHLDGAIKPETILYYGK---RRGIALPADTPEELLNIIGMDKPLTLPDFLAKFD 66
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ + + RI E VE A + +VY+E+R +P + SK
Sbjct: 67 YYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSPHL---LANSK------------ 111
Query: 122 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKL 181
V + + A + V+ N G R + VR +L R + + ++ E V+L
Sbjct: 112 -VEPIPWNQAEGDLTPDEVVSLVNQG-LQEGERDFGVKVRSILCCMRHQPSWSS-EVVEL 168
Query: 182 ALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQSM 237
+ R+ VV IDL+G+ T E ++ P A A + G+ T+H GE+ + ++
Sbjct: 169 CKKYREQTVVAIDLAGDETI-EGSSLFPGHVQAYAEAVKSGVHRTVHAGEVGSANVVKEA 227
Query: 238 LDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQ 294
+D L +R+GH E+ + +L+ + EIC S+ T H + Q
Sbjct: 228 VDTLKTERLGHGYHTLEDTTLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQ 287
Query: 295 HPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLKEIF 354
L TDD +F +++ +Y + E +L +A K F +++ KE+
Sbjct: 288 VNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP---EDEKKELL 344
Query: 355 DLAEK 359
DL K
Sbjct: 345 DLLYK 349
>pdb|3IAR|A Chain A, The Crystal Structure Of Human Adenosine Deaminase
Length = 367
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 40/366 (10%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEH-----VIMKSDRSLHEVFKLFD 62
PKVELH HL+GSI+ T+L R +G+ + ++ + M +L + FD
Sbjct: 7 PKVELHVHLDGSIKPETILYYGR---RRGIALPANTAEGLLNVIGMDKPLTLPDFLAKFD 63
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ + + RI E VE A E +VY+E+R +P + + + A EG
Sbjct: 64 YYMPAIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQA--EGDL 121
Query: 122 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKL 181
V V + + G R + R +L R + + + V+L
Sbjct: 122 TPDEV-VALVGQGLQ--------------EGERDFGVKARSILCCMRHQPNWSP-KVVEL 165
Query: 182 ALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQSM 237
+ + VV IDL+G+ T ++ LP A + A + G+ T+H GE+ + E ++
Sbjct: 166 CKKYQQQTVVAIDLAGDETI-PGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEA 224
Query: 238 LDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQ 294
+D L +R+GH E++ + +L+ + EIC S+ T H + L Q
Sbjct: 225 VDILKTERLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQ 284
Query: 295 HPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLK-EI 353
L TDD +F +++ +Y + E +L +A K F + ED K E+
Sbjct: 285 ANYSLNTDDPLIFKSTLDTDYQMTKRDMGFTEEEFKRLNINAAKSSF----LPEDEKREL 340
Query: 354 FDLAEK 359
DL K
Sbjct: 341 LDLLYK 346
>pdb|1UIP|A Chain A, Adenosine Deaminase (His 238 Glu Mutant)
Length = 349
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + ++G+ + +D + ++I M SL FD
Sbjct: 7 PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 63
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 64 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 104
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N G + I VR +L R + + ++E +
Sbjct: 105 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 163
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL+G+ T E ++ P A + A + G+ T+H GE+ + E ++
Sbjct: 164 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 222
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+G E+E + +L + E+C S+ T H V
Sbjct: 223 EAVDILKTERVGEGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 282
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L TDD +F +++ +Y + E +L +A K F
Sbjct: 283 DKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 331
>pdb|1W1I|E Chain E, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|F Chain F, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|G Chain G, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|H Chain H, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
Length = 357
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 38/365 (10%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEH-----VIMKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + +G+ + +D + M +L + FD
Sbjct: 10 PKVELHVHLDGAIKPETILYYGK---RRGIALPADTPEELLNIIGMDKPLTLPDFLAKFD 66
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ + + RI E VE A + +VY+E+R +P + SK
Sbjct: 67 YYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSPHL---LANSK------------ 111
Query: 122 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKL 181
V + + A + V+ N G R + VR +L R + + ++ E V+L
Sbjct: 112 -VEPIPWNQAEGDLTPDEVVSLVNQG-LQEGERDFGVKVRSILCCMRHQPSWSS-EVVEL 168
Query: 182 ALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQSM 237
+ R+ VV IDL+G+ T E ++ P A A + G+ T+H GE+ + ++
Sbjct: 169 CKKYREQTVVAIDLAGDETI-EGSSLFPGHVQAYAEAVKSGVHRTVHAGEVGSANVVKEA 227
Query: 238 LDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQ 294
+D L +R+GH E+ + +L+ + EIC S+ T H + Q
Sbjct: 228 VDTLKTERLGHGYHTLEDTTLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQ 287
Query: 295 HPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLKEIF 354
L TDD +F +++ +Y + E +L +A K F +++ KE+
Sbjct: 288 VNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP---EDEKKELL 344
Query: 355 DLAEK 359
DL K
Sbjct: 345 DLLYK 349
>pdb|1FKX|A Chain A, Murine Adenosine Deaminase (D296a)
Length = 349
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + ++G+ + +D + ++I M SL FD
Sbjct: 7 PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 63
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 64 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 104
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N G + I VR +L R + + ++E +
Sbjct: 105 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 163
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL+G+ T E ++ P A + A + G+ T+H GE+ + E ++
Sbjct: 164 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 222
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+GH E+E + +L + E+C S+ T H V
Sbjct: 223 EAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 282
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L TD +F +++ +Y + E +L +A K F
Sbjct: 283 DKANYSLNTDAPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 331
>pdb|1KRM|A Chain A, Crystal Structure Of Bovine Adenosine Deaminase Complexed
With 6-Hydroxyl-1,6-Dihydropurine Riboside
pdb|1QXL|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr235380
Length = 356
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 38/365 (10%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEH-----VIMKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + +G+ + +D + M +L + FD
Sbjct: 9 PKVELHVHLDGAIKPETILYYGK---RRGIALPADTPEELLNIIGMDKPLTLPDFLAKFD 65
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ + + RI E VE A + +VY+E+R +P + SK
Sbjct: 66 YYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSP---HLLANSK------------ 110
Query: 122 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKL 181
V + + A + V+ N G R + VR +L R + + ++ E V+L
Sbjct: 111 -VEPIPWNQAEGDLTPDEVVSLVNQG-LQEGERDFGVKVRSILCCMRHQPSWSS-EVVEL 167
Query: 182 ALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQSM 237
+ R+ VV IDL+G+ T E ++ P A A + G+ T+H GE+ + ++
Sbjct: 168 CKKYREQTVVAIDLAGDETI-EGSSLFPGHVQAYAEAVKSGVHRTVHAGEVGSANVVKEA 226
Query: 238 LDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQ 294
+D L +R+GH E+ + +L+ + EIC S+ T H + Q
Sbjct: 227 VDTLKTERLGHGYHTLEDTTLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQ 286
Query: 295 HPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLKEIF 354
L TDD +F +++ +Y + E +L +A K F +++ KE+
Sbjct: 287 VNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP---EDEKKELL 343
Query: 355 DLAEK 359
DL K
Sbjct: 344 DLLYK 348
>pdb|1UIO|A Chain A, Adenosine Deaminase (His 238 Ala Mutant)
Length = 349
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
PKVELH HL+G+I+ T+L + ++G+ + +D + ++I M SL FD
Sbjct: 7 PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 63
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 64 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 104
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N G + I VR +L R + + ++E +
Sbjct: 105 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 163
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL+G+ T E ++ P A + A + G+ T+H GE+ + E ++
Sbjct: 164 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 222
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+G E+E + +L + E+C S+ T H V
Sbjct: 223 EAVDILKTERVGAGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 282
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L TDD +F +++ +Y + E +L +A K F
Sbjct: 283 DKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 331
>pdb|3OU8|A Chain A, The Crystal Structure Of Adenosine Deaminase From
Pseudomonas Aeruginosa
pdb|3OU8|B Chain B, The Crystal Structure Of Adenosine Deaminase From
Pseudomonas Aeruginosa
pdb|3PAN|A Chain A, The Crystal Structure Of Adenosine Deaminase With
Hypoxanthine Bound From Pseudomonas Aeruginosa
pdb|3PAN|B Chain B, The Crystal Structure Of Adenosine Deaminase With
Hypoxanthine Bound From Pseudomonas Aeruginosa
pdb|3PAO|A Chain A, The Crystal Structure Of Adenosine Deaminase With Adenine
Bound From Pseudomonas Aeruginosa
pdb|3PAO|B Chain B, The Crystal Structure Of Adenosine Deaminase With Adenine
Bound From Pseudomonas Aeruginosa
pdb|3PBM|A Chain A, The Crystal Structure Of Adenosine Deaminase In Complex
With Chloropurine From Pseudomonas Aeruginosa
pdb|3PBM|B Chain B, The Crystal Structure Of Adenosine Deaminase In Complex
With Chloropurine From Pseudomonas Aeruginosa
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 147/346 (42%), Gaps = 48/346 (13%)
Query: 2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLF 61
EW ++PK ELH HL G++ L LA + + ++DVE ++ + + + +
Sbjct: 5 EWLNALPKAELHLHLEGTLEPELLFALAE--RNRIALPWNDVE--TLRKAYAFNNLQEFL 60
Query: 62 DLIH----VLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVV 117
DL + VL T+ +T ++ ++N+V++E P+ + G+ + V+
Sbjct: 61 DLYYAGADVLRTEQ-DFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIP----FEVVL 115
Query: 118 EGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAME 177
G+RA A R +G + I L+LS R + E A +
Sbjct: 116 AGIRA--------ALR-----------------DGEKLLGIRHGLILSFLRHLSEEQAQK 150
Query: 178 TVKLALEMRDLGV-VGIDLS--GNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEI 234
T+ AL RD + VG+D S G+P + F AR +G H GE E I
Sbjct: 151 TLDQALPFRDAFIAVGLDSSEVGHPP----SKFQRVFDRARSEGFLTVAHAGEEGPPEYI 206
Query: 235 QSMLDFLP-QRIGHAC-CFEEEEW-RKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLY 291
LD L +RI H FE+E R+L +IP+ +C SN + H +D
Sbjct: 207 WEALDLLKVERIDHGVRAFEDERLXRRLIDEQIPLTVCPLSNTKLCVFDDXSQHTILDXL 266
Query: 292 KAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAV 337
+ + + +DD F V+ + + + +LA++++
Sbjct: 267 ERGVKVTVNSDDPAYFGGYVTENFHALQQSLGXTEEQARRLAQNSL 312
>pdb|3T1G|A Chain A, Engineering Of Organophosphate Hydrolase By Computational
Design And Directed Evolution
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD-VEHV--IMKSDRSLHEVFKL--FD 62
PKVELH HL+G+I+ T+L + ++G+ + +D VE + I+ D+ L + L +D
Sbjct: 11 PKVELHVHLSGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSQPGTLAKWD 67
Query: 63 L-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
+ V+ + RI E VE A E +VY+E+R +P L
Sbjct: 68 YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 108
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
A S VD + + DV +N + G + I VR +L R + + ++E +
Sbjct: 109 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLHEGEQAFGIKVRSILCCMRHQPS-WSLEVL 167
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
+L + VV +DL G+ T E ++ P A + A + G+ T+H GE + E ++
Sbjct: 168 ELCKKYNQKTVVAMDLIGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEFGSPEVVR 226
Query: 236 SMLDFLP-QRIGHACCFEEEE--WRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+D L +R+GH E+E + +L + E+C S+ T H V
Sbjct: 227 EAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKN 286
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 341
+ L TD F +++ +Y + E +L +A K F
Sbjct: 287 DKANYSLNTDAPLEFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSF 335
>pdb|2AMX|A Chain A, Crystal Structure Of Plasmodium Yoelii Adenosine Deaminase
(Py02076)
pdb|2AMX|B Chain B, Crystal Structure Of Plasmodium Yoelii Adenosine Deaminase
(Py02076)
Length = 376
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 148/362 (40%), Gaps = 39/362 (10%)
Query: 2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDV--EHVIMKSDRSLHEVFK 59
E + +PKVELH HL+ + L+ AR + + ++ ++ K +SL E +
Sbjct: 44 EIWRRIPKVELHCHLDLTFSAEFFLKWARKYNLQPNMSDDEILDHYLFTKEGKSLAEFIR 103
Query: 60 LFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKR-NESIGMSKRSYMDAVVE 118
+ L D+ + + + V + E +V +E R +P + S G+ A ++
Sbjct: 104 KAISVSDLYRDYDFIEDLAKWAVIEKYKEGVVLMEFRYSPTFVSSSYGLDVELIHKAFIK 163
Query: 119 GLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMET 178
G+ KN + N KI+V L+ D + +
Sbjct: 164 GI-----------------------KNATELLNN----KIHVALICISDTGHAAASIKHS 196
Query: 179 VKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGE---IPNKEEIQ 235
A++ + VG D G + R+ GL +T+H GE +PN +
Sbjct: 197 GDFAIKHKH-DFVGFDHGGREI--DLKDHKDVYHSVRDHGLHLTVHAGEDATLPNLNTLY 253
Query: 236 SMLDFLP-QRIGHACCFEE--EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYK 292
+ ++ L +RIGH E E +K I +E+C SN+ + S+D H LY
Sbjct: 254 TAINILNVERIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNNVKSMDTHPIRKLYD 313
Query: 293 AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLKE 352
A + + +DD G+F ++++ Y+ + E + A + F + VK +LK
Sbjct: 314 AGVKVSVNSDDPGMFLSNINDNYEKLYIHLNFTLEEFMIMNNWAFEKSFVSDDVKSELKA 373
Query: 353 IF 354
++
Sbjct: 374 LY 375
>pdb|3EWC|A Chain A, Crystal Structure Of Adenosine Deaminase From Plasmodial
Vivax In Complex With Mt-Coformycin
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 151/367 (41%), Gaps = 59/367 (16%)
Query: 7 MPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVE----HVIMKSDRSLHE----VF 58
+PK ELH HL+ + R + + SD E ++ K +SL E
Sbjct: 36 IPKCELHCHLDLCFSADFFVSCIRKYNLQPNL--SDEEVLDYYLFAKGGKSLGEFVEKAI 93
Query: 59 KLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTP-----KRNESIGMSKRSYM 113
K+ D+ H D+ + + + V + E +V +E R +P K N I + +
Sbjct: 94 KVADIFH----DYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQ--- 146
Query: 114 DAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTE 173
A+V+G++ V + KI+V L+ D
Sbjct: 147 -AIVKGIKEVVEL---------------------------LDHKIHVALMCIGDTGHEAA 178
Query: 174 AAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGE---IPN 230
+ L+ + VG D G+ + + + RE G+ +++H GE +PN
Sbjct: 179 NIKASADFCLKHK-ADFVGFDHGGHEV--DLKEYKEIFDYVRESGVPLSVHAGEDVTLPN 235
Query: 231 KEEIQSMLDFLP-QRIGHACCFEE--EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHF 287
+ S + L +RIGH E E +K I +E+C SN+ + S+D H
Sbjct: 236 LNTLYSAIQVLKVERIGHGIRVAESQELIDMVKEKNILLEVCPISNVLLKNAKSMDTHPI 295
Query: 288 VDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVK 347
LY A + + +DD G+F T+++ +Y+ + + + ++ + A++ F + +K
Sbjct: 296 RQLYDAGVKVSVNSDDPGMFLTNINDDYEELYTHLNFTLEDFMKMNEWALEKSFMDSNIK 355
Query: 348 EDLKEIF 354
+ +K ++
Sbjct: 356 DKIKNLY 362
>pdb|3EWD|A Chain A, Crystal Structure Of Adenosine Deaminase Mutant (Delta
Asp172) From Plasmodium Vivax In Complex With
Mt-Coformycin
Length = 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 153/367 (41%), Gaps = 60/367 (16%)
Query: 7 MPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVE----HVIMKSDRSLHE----VF 58
+PK ELH HL+ + R + + SD E ++ K +SL E
Sbjct: 36 IPKCELHCHLDLCFSADFFVSCIRKYNLQPNL--SDEEVLDYYLFAKGGKSLGEFVEKAI 93
Query: 59 KLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTP-----KRNESIGMSKRSYM 113
K+ D+ H D+ + + + V + E +V +E R +P K N I + +
Sbjct: 94 KVADIFH----DYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQ--- 146
Query: 114 DAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTE 173
A+V+G++ V V+ I V C GT + ++
Sbjct: 147 -AIVKGIKEV----VELLDHKIHVAL---------MCIGTGHEAANIK------------ 180
Query: 174 AAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGE---IPN 230
+ L+ + VG D G+ + + + RE G+ +++H GE +PN
Sbjct: 181 ---ASADFCLKHK-ADFVGFDHGGHEV--DLKEYKEIFDYVRESGVPLSVHAGEDVTLPN 234
Query: 231 KEEIQSMLDFLP-QRIGHACCFEE--EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHF 287
+ S + L +RIGH E E +K I +E+C SN+ + S+D H
Sbjct: 235 LNTLYSAIQVLKVERIGHGIRVAESQELIDMVKEKNILLEVCPISNVLLKNAKSMDTHPI 294
Query: 288 VDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVK 347
LY A + + +DD G+F T+++ +Y+ + + + ++ + A++ F + +K
Sbjct: 295 RQLYDAGVKVSVNSDDPGMFLTNINDDYEELYTHLNFTLEDFMKMNEWALEKSFMDSNIK 354
Query: 348 EDLKEIF 354
+ +K ++
Sbjct: 355 DKIKNLY 361
>pdb|2PGF|A Chain A, Crystal Structure Of Adenosine Deaminase From Plasmodium
Vivax In Complex With Adenosine
pdb|2PGR|A Chain A, Crystal Structure Of Adenosine Deaminase From Plasmodium
Vivax In Complex With Pentostatin
pdb|2QVN|A Chain A, Crystal Structure Of Adenosine Deaminase From Plasmodium
Vivax In Complex With Guanosine
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 146/367 (39%), Gaps = 59/367 (16%)
Query: 7 MPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVE----HVIMKSDRSLHE----VF 58
+PK ELH HL+ + R + + SD E ++ K +SL E
Sbjct: 44 IPKCELHCHLDLCFSADFFVSCIRKYNLQPNL--SDEEVLDYYLFAKGGKSLGEFVEKAI 101
Query: 59 KLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTP-----KRNESIGMSKRSYM 113
K+ D+ H D+ + + + V + E +V E R +P K N I + +
Sbjct: 102 KVADIFH----DYEVIEDLAKHAVFNKYKEGVVLXEFRYSPTFVAFKYNLDIELIHQ--- 154
Query: 114 DAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTE 173
A+V+G++ V + KI+V L D
Sbjct: 155 -AIVKGIKEVVEL---------------------------LDHKIHVALXCIGDTGHEAA 186
Query: 174 AAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGE---IPN 230
+ L+ + VG D G+ + + + RE G+ +++H GE +PN
Sbjct: 187 NIKASADFCLKHK-ADFVGFDHGGHEV--DLKEYKEIFDYVRESGVPLSVHAGEDVTLPN 243
Query: 231 KEEIQSMLDFLP-QRIGHACCFEE--EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHF 287
+ S + L +RIGH E E +K I +E+C SN+ + S D H
Sbjct: 244 LNTLYSAIQVLKVERIGHGIRVAESQELIDXVKEKNILLEVCPISNVLLKNAKSXDTHPI 303
Query: 288 VDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVK 347
LY A + + +DD G F T+++ +Y+ + + + + + A++ F + +K
Sbjct: 304 RQLYDAGVKVSVNSDDPGXFLTNINDDYEELYTHLNFTLEDFXKXNEWALEKSFXDSNIK 363
Query: 348 EDLKEIF 354
+ +K ++
Sbjct: 364 DKIKNLY 370
>pdb|4GXW|A Chain A, Crystal Structure Of A Cog1816 Amidohydrolase (Target
Efi-505188) From Burkhoderia Ambifaria, With Bound Zn
pdb|4GXW|B Chain B, Crystal Structure Of A Cog1816 Amidohydrolase (Target
Efi-505188) From Burkhoderia Ambifaria, With Bound Zn
Length = 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 43/245 (17%)
Query: 4 FASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDL 63
F ++PKVELH HL G++R T + LA+ G I ++++ + ++ + + L L
Sbjct: 26 FHALPKVELHCHLLGAVRHDTFVALAQRSGAP--IERAEIDAFYARGEKPVGVLHVLRAL 83
Query: 64 IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDA---VVEGL 120
L T + RI E +ED A+ N+ + E P ++ +S Y DA +V G+
Sbjct: 84 DRYLLTRPDDLRRIAYEYLEDAAAHNVRHAEFFWNP--TGTVRVSGIPYADAQAAIVTGM 141
Query: 121 RAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVK 180
R + R I RL+ SIDR + + A+ V
Sbjct: 142 R-----------------------------DAARDFGIGARLIPSIDREQDPDEAVAIVD 172
Query: 181 LALEMR--DLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGE--IPNKEEIQS 236
R ++ +GID N E F A + AR G + T H GE +P + +++
Sbjct: 173 WMKANRADEVAGIGIDYRENDRPPE--LFWKAYRDARAAGFRTTAHAGEFGMPWR-NVET 229
Query: 237 MLDFL 241
+D L
Sbjct: 230 AVDLL 234
>pdb|3RYS|A Chain A, The Crystal Structure Of Adenine Deaminase (Aaur1117) From
Arthrobacter Aurescens
pdb|3RYS|B Chain B, The Crystal Structure Of Adenine Deaminase (Aaur1117) From
Arthrobacter Aurescens
Length = 343
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 145/346 (41%), Gaps = 48/346 (13%)
Query: 8 PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIH-- 65
P ELH H+ G+++ + LA G + + + D+E ++ ++ DL +
Sbjct: 14 PVAELHLHIEGTLQPELIFALAERNGIE--LPYEDIEE--LREKYEFTDLQSFLDLYYAN 69
Query: 66 --VLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAV 123
VL T+ T +T+ +E A+ + + E+ P+ + S G++ + ++ V A+
Sbjct: 70 MAVLQTEQ-DFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVA---NAL 125
Query: 124 SAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLAL 183
+ + DF ++ L+ + R + ++A+E + L
Sbjct: 126 ATSEEDFGVSTL--------------------------LIAAFLRDMSEDSALEVLDQLL 159
Query: 184 EMR-DLGVVGIDLS--GNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDF 240
M + +G+D + GNP + F + A E GL+ H GE I LD
Sbjct: 160 AMHAPIAGIGLDSAEVGNPP----SKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDV 215
Query: 241 LP-QRIGHAC-CFEEEEW-RKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPL 297
L +RI H C E+ + ++L + ++P+ +C SN+R + L H ++ +
Sbjct: 216 LHVERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLPEMLAIGLNV 275
Query: 298 VLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFAN 343
+ +DD F V ++ E LA ++++ FA+
Sbjct: 276 CVNSDDPAYFGGYVDDNFEQLVKVLEFSVPEQATLAANSIRSSFAS 321
>pdb|3LGD|A Chain A, Crystal Structure Of Human Adenosine Deaminase Growth
Factor, Adenosine Deaminase Type 2 (Ada2)
pdb|3LGD|B Chain B, Crystal Structure Of Human Adenosine Deaminase Growth
Factor, Adenosine Deaminase Type 2 (Ada2)
pdb|3LGG|A Chain A, Crystal Structure Of Human Adenosine Deaminase Growth
Factor Adenosine Deaminase Type 2 (Ada2) Complexed With
Transition Analogue, Coformycin
pdb|3LGG|B Chain B, Crystal Structure Of Human Adenosine Deaminase Growth
Factor Adenosine Deaminase Type 2 (Ada2) Complexed With
Transition Analogue, Coformycin
Length = 508
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 153 TRGKKIYVRLLLSIDRRETTEAAMETVKLALEMR---DLGVVGIDLSGNPTKGE-WTTFL 208
T + I ++++ S R + E++++A+ +R V G DL G+ G +
Sbjct: 253 THPEFIGIKIIYSDHRSKDVAVIAESIRMAMGLRIKFPTVVAGFDLVGHEDTGHSLHDYK 312
Query: 209 PALKFAREQGLQIT--LHCGEIPNKEEI--QSMLDFL---PQRIGHACCFEEEEWRKLKS 261
AL + G+++ H GE + +++LD L RIGH + + S
Sbjct: 313 EALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGHGFALSKHPAVRTYS 372
Query: 262 SK--IPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAA 319
K IP+E+C SN + +S L H L HP+V+ +DD +F YD
Sbjct: 373 WKKDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAK-GLSYDFYE 431
Query: 320 SAFSLGR-----REMFQLAKSAVKF 339
+G R + QLA +++K+
Sbjct: 432 VFMGIGGMKADLRTLKQLAMNSIKY 456
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,745,956
Number of Sequences: 62578
Number of extensions: 366167
Number of successful extensions: 1012
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 938
Number of HSP's gapped (non-prelim): 45
length of query: 363
length of database: 14,973,337
effective HSP length: 100
effective length of query: 263
effective length of database: 8,715,537
effective search space: 2292186231
effective search space used: 2292186231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)