Query 017944
Match_columns 363
No_of_seqs 183 out of 1439
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 07:25:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017944.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017944hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 2.1E-83 7.2E-88 613.7 22.9 352 2-363 6-422 (427)
2 3qb0_A Actin-related protein 4 100.0 1.9E-82 6.4E-87 612.4 29.1 353 1-363 23-498 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 4.2E-76 1.4E-80 558.6 30.0 354 1-363 5-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 1.7E-76 5.9E-81 564.1 15.8 350 2-360 7-388 (394)
5 4fo0_A Actin-related protein 8 100.0 2.9E-74 1E-78 577.4 22.2 354 3-363 17-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 6.9E-72 2.4E-76 537.5 28.2 352 1-362 5-412 (418)
7 4am6_A Actin-like protein ARP8 100.0 3.4E-61 1.1E-65 467.2 19.9 311 40-363 158-652 (655)
8 1jce_A ROD shape-determining p 100.0 5.7E-36 2E-40 280.3 20.9 308 2-341 4-330 (344)
9 3h1q_A Ethanolamine utilizatio 99.9 2.8E-24 9.7E-29 194.2 16.4 243 3-335 30-272 (272)
10 2v7y_A Chaperone protein DNAK; 99.9 4.6E-24 1.6E-28 209.2 13.4 291 1-336 1-349 (509)
11 1dkg_D Molecular chaperone DNA 99.9 4.3E-24 1.5E-28 202.5 10.7 300 1-337 1-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.9 6.1E-23 2.1E-27 195.2 14.7 294 3-337 20-392 (394)
13 3i33_A Heat shock-related 70 k 99.9 8E-22 2.7E-26 188.2 13.8 296 1-337 23-400 (404)
14 1yuw_A Heat shock cognate 71 k 99.8 4.6E-19 1.6E-23 175.2 17.7 294 2-336 5-378 (554)
15 2kho_A Heat shock protein 70; 99.8 1E-18 3.4E-23 174.4 16.9 296 1-337 1-381 (605)
16 3d2f_A Heat shock protein homo 99.8 1E-17 3.5E-22 168.6 20.3 292 1-336 2-381 (675)
17 4gni_A Putative heat shock pro 99.8 1.5E-18 5.1E-23 165.8 12.0 236 66-338 129-401 (409)
18 2ych_A Competence protein PILM 99.7 5.3E-17 1.8E-21 153.3 16.2 165 110-300 159-330 (377)
19 2fsj_A Hypothetical protein TA 99.7 9.6E-18 3.3E-22 156.3 8.6 170 1-182 21-239 (346)
20 4b9q_A Chaperone protein DNAK; 99.7 2.8E-16 9.5E-21 156.8 18.0 295 1-336 1-380 (605)
21 4a2a_A Cell division protein F 99.5 1.1E-13 3.7E-18 131.9 10.5 205 100-337 167-393 (419)
22 2zgy_A Plasmid segregation pro 99.5 3.7E-13 1.3E-17 124.1 12.2 178 112-336 136-320 (320)
23 4apw_A ALP12; actin-like prote 99.4 5.8E-13 2E-17 123.1 9.3 273 4-337 10-324 (329)
24 3js6_A Uncharacterized PARM pr 99.3 1.6E-12 5.4E-17 121.2 8.5 198 88-337 114-336 (355)
25 2d0o_A DIOL dehydratase-reacti 98.7 6.4E-08 2.2E-12 92.1 11.8 74 123-206 390-469 (610)
26 1nbw_A Glycerol dehydratase re 98.7 7E-08 2.4E-12 92.1 9.7 74 123-206 392-471 (607)
27 4ehu_A Activator of 2-hydroxyi 98.2 3.7E-06 1.3E-10 75.3 8.4 168 118-336 73-253 (276)
28 1hux_A Activator of (R)-2-hydr 97.5 0.00011 3.8E-09 65.4 5.9 47 278-337 210-256 (270)
29 1t6c_A Exopolyphosphatase; alp 97.0 0.0014 4.7E-08 59.5 7.4 73 101-176 97-177 (315)
30 3mdq_A Exopolyphosphatase; str 96.7 0.0022 7.5E-08 58.3 6.5 72 102-176 90-170 (315)
31 3cer_A Possible exopolyphospha 96.5 0.0037 1.3E-07 57.4 6.6 74 102-176 103-191 (343)
32 2gup_A ROK family protein; sug 96.5 0.019 6.5E-07 51.2 11.2 53 105-160 86-143 (292)
33 1u6z_A Exopolyphosphatase; alp 96.4 0.014 4.8E-07 56.6 9.8 153 3-176 13-176 (513)
34 3hi0_A Putative exopolyphospha 96.3 0.019 6.5E-07 55.6 10.4 72 101-175 100-178 (508)
35 4db3_A Glcnac kinase, N-acetyl 95.8 0.12 4.2E-06 46.8 12.7 51 108-160 114-171 (327)
36 4htl_A Beta-glucoside kinase; 95.8 0.67 2.3E-05 41.2 17.4 50 109-160 92-148 (297)
37 3vgl_A Glucokinase; ROK family 95.5 0.18 6.3E-06 45.5 12.9 51 108-160 90-147 (321)
38 2qm1_A Glucokinase; alpha-beta 95.5 0.076 2.6E-06 48.0 10.1 50 109-160 103-159 (326)
39 2ews_A Pantothenate kinase; PA 95.4 0.094 3.2E-06 46.6 9.9 49 277-335 237-286 (287)
40 3vov_A Glucokinase, hexokinase 94.9 0.19 6.5E-06 45.0 10.9 51 108-160 92-149 (302)
41 3aap_A Ectonucleoside triphosp 94.3 0.18 6.2E-06 46.2 9.2 101 65-170 52-177 (353)
42 2i7n_A Pantothenate kinase 1; 94.0 0.28 9.7E-06 44.9 9.7 173 135-335 175-358 (360)
43 2hoe_A N-acetylglucosamine kin 93.2 0.92 3.2E-05 41.9 12.1 51 108-160 182-237 (380)
44 3r8e_A Hypothetical sugar kina 93.0 0.36 1.2E-05 43.5 8.8 50 109-160 112-169 (321)
45 3cet_A Conserved archaeal prot 91.8 0.13 4.3E-06 46.5 3.9 25 135-159 127-151 (334)
46 3bex_A Type III pantothenate k 90.4 2.5 8.5E-05 36.5 10.8 26 134-160 121-146 (249)
47 3djc_A Type III pantothenate k 90.3 2.5 8.4E-05 36.9 10.8 16 3-18 4-19 (266)
48 2h3g_X Biosynthetic protein; p 90.1 1.9 6.5E-05 37.7 9.9 15 4-18 3-17 (268)
49 3zx3_A Ectonucleoside triphosp 89.9 0.6 2.1E-05 44.1 6.9 90 66-156 89-202 (452)
50 3cj1_A Ectonucleoside triphosp 87.0 0.87 3E-05 43.2 5.9 22 135-156 190-211 (456)
51 1zbs_A Hypothetical protein PG 85.4 5.6 0.00019 34.9 10.2 70 89-159 62-133 (291)
52 3epq_A Putative fructokinase; 84.7 9.6 0.00033 33.7 11.5 52 108-161 91-149 (302)
53 2ap1_A Putative regulator prot 84.4 3.8 0.00013 36.6 8.8 50 109-160 115-171 (327)
54 1zc6_A Probable N-acetylglucos 83.9 7.4 0.00025 34.4 10.4 127 3-158 13-145 (305)
55 2ch5_A NAGK protein; transfera 81.4 16 0.00056 32.6 11.9 92 65-158 49-144 (347)
56 1saz_A Probable butyrate kinas 74.5 32 0.0011 31.4 11.7 72 278-359 297-375 (381)
57 2f9w_A Pantothenate kinase; CO 70.0 24 0.00082 30.7 9.1 15 4-18 26-40 (271)
58 2e2o_A Hexokinase; acetate and 68.2 39 0.0013 29.3 10.5 61 89-156 62-123 (299)
59 1zxo_A Conserved hypothetical 56.1 16 0.00056 31.9 5.5 55 105-159 75-131 (291)
60 2aa4_A Mannac kinase, putative 55.0 4.9 0.00017 35.1 1.9 51 107-160 89-146 (289)
61 3qbx_A Anhydro-N-acetylmuramic 48.2 8.7 0.0003 35.1 2.4 23 278-300 285-307 (371)
62 3cqy_A Anhydro-N-acetylmuramic 42.7 11 0.00039 34.3 2.2 23 278-300 291-313 (370)
63 2aa4_A Mannac kinase, putative 40.3 45 0.0016 28.7 5.9 65 257-335 221-286 (289)
64 3eno_A Putative O-sialoglycopr 39.2 19 0.00063 32.4 3.1 24 277-300 250-273 (334)
65 1saz_A Probable butyrate kinas 39.0 26 0.00088 32.0 4.1 54 105-160 111-200 (381)
66 2ivn_A O-sialoglycoprotein end 34.2 23 0.00079 31.7 2.9 24 277-300 245-268 (330)
67 2e2o_A Hexokinase; acetate and 34.1 27 0.00091 30.4 3.3 45 278-336 241-286 (299)
68 3djc_A Type III pantothenate k 29.9 1E+02 0.0035 26.5 6.2 49 137-185 4-53 (266)
69 2jsh_A Appetite-regulating hor 29.1 11 0.00038 19.9 -0.1 14 343-356 9-22 (26)
70 1woq_A Inorganic polyphosphate 27.7 1E+02 0.0035 26.1 5.9 53 106-160 106-166 (267)
71 1z05_A Transcriptional regulat 27.1 79 0.0027 29.1 5.4 51 108-160 202-259 (429)
72 1z6r_A MLC protein; transcript 26.1 83 0.0028 28.7 5.3 50 109-160 181-237 (406)
73 2itm_A Xylulose kinase, xylulo 26.1 56 0.0019 30.7 4.2 47 278-337 388-434 (484)
74 2yhw_A Bifunctional UDP-N-acet 26.0 71 0.0024 28.3 4.7 47 112-160 129-182 (343)
75 3htv_A D-allose kinase, alloki 25.5 41 0.0014 29.6 3.0 53 106-160 99-157 (310)
76 2ch5_A NAGK protein; transfera 25.5 32 0.0011 30.6 2.3 72 256-336 244-323 (347)
77 1djx_A PLC-D1, phosphoinositid 24.6 39 0.0013 33.2 2.9 44 65-115 235-278 (624)
78 1bdg_A Hexokinase; phosphotran 24.0 36 0.0012 32.0 2.4 50 280-338 396-447 (451)
79 2yhw_A Bifunctional UDP-N-acet 23.9 44 0.0015 29.7 2.9 64 257-336 272-337 (343)
80 3ttc_A HYPF, transcriptional r 22.7 78 0.0027 31.3 4.5 23 278-300 601-623 (657)
81 2q2r_A Glucokinase 1, putative 22.2 27 0.00091 31.7 1.1 48 112-160 125-206 (373)
82 2zkm_X 1-phosphatidylinositol- 20.4 59 0.002 33.0 3.2 45 65-116 385-430 (799)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-83 Score=613.75 Aligned_cols=352 Identities=28% Similarity=0.434 Sum_probs=307.1
Q ss_pred ccEEEEcCCCcEEEeecCCCCCCceecccceeeccC--------------------------------CCccccCccccc
Q 017944 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLE--------------------------------DGSSSVDNSTLV 49 (363)
Q Consensus 2 ~~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~~--------------------------------~~~~g~~~~~~~ 49 (363)
++||||+||+++|+||| ||+.|++++||++++... +.++| +++...
T Consensus 6 ~~iViDnGs~~~KaG~a-g~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG-~ea~~~ 83 (427)
T 3dwl_A 6 VPIIMDNGTGYSKLGYA-GNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIG-NDALKK 83 (427)
T ss_dssp SCEEECCCSSBC-CEET-TSSSCSCCCBCCEECC------------------------------CCSSCCEET-HHHHHT
T ss_pred CeEEEECCCCeEEEEEC-CCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEc-hHHhhC
Confidence 68999999999999999 999999999999976421 35788 877555
Q ss_pred C--Cce-eccccCCeecCHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchh
Q 017944 50 E--DVT-VDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAV 126 (363)
Q Consensus 50 ~--~~~-~~p~~~g~i~~~~~~~~i~~~~~~~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~ 126 (363)
+ .+. +||+++|.|.|||.+|++|+|+|.+.|++++ .++|+++++|+++++..|++++|++||.|++|+++++.+++
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~-~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~v 162 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEP-EDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAV 162 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCG-GGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCC-cCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHH
Confidence 4 344 5999999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred hhhccCC--------CceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCccccHHHHHHHH
Q 017944 127 LSLYAVG--------RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLK 198 (363)
Q Consensus 127 ~a~~~~g--------~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~iK 198 (363)
||+|++| .++|+|||+|++.|+|+||++|+++.++++++++||+++|++|.++|+++++. ..+.+++++||
T Consensus 163 la~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~-~~~~~~~~~IK 241 (427)
T 3dwl_A 163 LALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP-DSSLKTAERIK 241 (427)
T ss_dssp HHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC---------CHHHHHHH
T ss_pred HHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC-chhHHHHHHHH
Confidence 9999998 68999999999999999999999999999999999999999999999988776 56788999999
Q ss_pred HHcccccCC-HHHHHHhcccC-CCceeEC--CCCc--EEEEeceeccccccccCCCCCCcc-cccHHHHHHHHHHcCChh
Q 017944 199 EQFSCCAED-ELAYEKTQKSC-EIEQHTL--PDGQ--VIRIGKERYTVGEALFQPSILGLE-AHGIVEQLVHTISTVSSE 271 (363)
Q Consensus 199 ~~~~~v~~~-~~~~~~~~~~~-~~~~~~l--p~~~--~i~i~~~r~~~~E~lF~p~~~~~~-~~~l~~~I~~~i~~~~~~ 271 (363)
+++||++.| .++++...... ..+.|.+ |||. .+.++.|||+++|+||+|++++.+ ..+|+++|.++|++||+|
T Consensus 242 e~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~d 321 (427)
T 3dwl_A 242 EECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPID 321 (427)
T ss_dssp HHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHH
T ss_pred HhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHH
Confidence 999999998 55555432221 2367778 8887 788899999999999999999988 489999999999999999
Q ss_pred HHHHhhcCeEEccCcccccchHHHHHhhh-ccC--------------CCCcceEEeCCCCCCCcCCcceeeeechhhhhc
Q 017944 272 NHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLC--------------SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 336 (363)
Q Consensus 272 ~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~--------------~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~ 336 (363)
+|+.|++|||||||+|++|||.+||++|| ++. |..++++|.++|+ |.+++|+||||+|+
T Consensus 322 lr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~------r~~s~WiGGSilas 395 (427)
T 3dwl_A 322 VRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKR------QRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTT------CTTHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCc------cccceecCceeecc
Confidence 99999999999999999999999999999 765 5567899999998 99999999999999
Q ss_pred cCCCCceeeehHHHhhcCccchhcccC
Q 017944 337 VVFPQNQHITKADYDESGPSVVHRKCF 363 (363)
Q Consensus 337 l~~~~~~~itk~ey~e~G~~~~~rk~~ 363 (363)
+++|+++||||+||+|+|+++++||++
T Consensus 396 l~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 396 TPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp STTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred ccchhheeEEHHHHhhhChHhheeccc
Confidence 999999999999999999999999974
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-82 Score=612.35 Aligned_cols=353 Identities=22% Similarity=0.377 Sum_probs=316.4
Q ss_pred CccEEEEcCCCcEEEeecCCCCCCceecccceeecc----CCCccccCc-ccccC-Cce-eccccCCeecCHHHHHHHHH
Q 017944 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL----EDGSSSVDN-STLVE-DVT-VDPVVRGFIRDWDAMEDLLH 73 (363)
Q Consensus 1 m~~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~----~~~~~g~~~-~~~~~-~~~-~~p~~~g~i~~~~~~~~i~~ 73 (363)
+++||||+||+++|+||+ |++.|++++||++++.. +..++| ++ +...+ .+. ++|+++|.|.|||.+|.+|+
T Consensus 23 ~~~iVID~GS~~~kaG~a-g~~~P~~v~PSvVg~~~~~~~~~~~vG-~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~ 100 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYS-GSDFPQSILPSVYGKYTADEGNKKIFS-EQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQ 100 (498)
T ss_dssp BSCEEEECCSSEEEEEET-TCSSCSEEEESEEEEESSCSSCCEECC-TTGGGSCCTTEEEEESEETTEESCHHHHHHHHH
T ss_pred CCeEEEECCCcEEEEEEC-CCCCeeeecCceeEEeccCCCccEEEe-cHHHhcCcCceEEeccCcCCEEccHHHHHHHHH
Confidence 368999999999999999 99999999999998743 246789 76 44444 555 49999999999999999999
Q ss_pred HHHhhccCCCCCCCc-eEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCCCceEEEEecCCCceEEEEe
Q 017944 74 HVLYAGLGWEEGNEG-QILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPV 152 (363)
Q Consensus 74 ~~~~~~l~~~~~~~~-~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~v~pv 152 (363)
|+|.+.|++++ .++ |+++++|+++++..|++++|++||.|++|+++++.+++||+||+|.++|+|||+|++.|+|+||
T Consensus 101 ~~f~~~L~v~p-~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g~T~vvPI 179 (498)
T 3qb0_A 101 WALQNELYLNS-NSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPI 179 (498)
T ss_dssp HHHHHTSCCSC-CTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSSCEEEEEE
T ss_pred HHHHhhhCCCc-ccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCCcEEEEEE
Confidence 99998899998 888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCeecccceEEeeccHHHHHHHHHHHHhcc------------------CCCccc---------cHHHHHHHHHHccccc
Q 017944 153 IEGAVQHIASRRFEVGGMDLTKLLAQELGKT------------------NPSVNL---------SLYDVEKLKEQFSCCA 205 (363)
Q Consensus 153 ~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~------------------~~~~~~---------~~~~~~~iK~~~~~v~ 205 (363)
++|+++.+++.++++||+++|++|.++|+++ ++.+.. +.++++++||++|||+
T Consensus 180 ~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va 259 (498)
T 3qb0_A 180 VDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHIC 259 (498)
T ss_dssp ETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCC
T ss_pred eCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEec
Confidence 9999999999999999999999999999864 333311 3458999999999999
Q ss_pred CC-HH-HHHHhcccCCCceeECCCCcEEEEece-eccccccccCCCCCCc------------------------------
Q 017944 206 ED-EL-AYEKTQKSCEIEQHTLPDGQVIRIGKE-RYTVGEALFQPSILGL------------------------------ 252 (363)
Q Consensus 206 ~~-~~-~~~~~~~~~~~~~~~lp~~~~i~i~~~-r~~~~E~lF~p~~~~~------------------------------ 252 (363)
.+ +. +......+...+.|+||||+.|.++.| ||.++|.||+|++++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 339 (498)
T 3qb0_A 260 PTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGV 339 (498)
T ss_dssp SSCHHHHHHHHHHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC----
T ss_pred CCccHhHHhhhccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCcccccccccccccccccccccccccccccc
Confidence 87 22 211112234457899999999999999 9999999999997654
Q ss_pred --------------------------------------------------ccccHHHHHHHHHHcCChhHHHHhhcCeEE
Q 017944 253 --------------------------------------------------EAHGIVEQLVHTISTVSSENHRQLLENTVL 282 (363)
Q Consensus 253 --------------------------------------------------~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl 282 (363)
+..||+++|.++|++||.|+|+.|++||||
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvL 419 (498)
T 3qb0_A 340 NKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVL 419 (498)
T ss_dssp -------------------------------------------------CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEE
Confidence 557899999999999999999999999999
Q ss_pred ccCcccccchHHHHHhhh-ccCCCCcceEEeCC---CCCCCcCCcceeeeechhhhhccCCCCceeeehHHHhhcCc-cc
Q 017944 283 CGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKP---PEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESGP-SV 357 (363)
Q Consensus 283 ~GG~s~l~G~~~rL~~eL-~~~~~~~~i~v~~~---~~~~~~~~~~~~~w~Gasi~a~l~~~~~~~itk~ey~e~G~-~~ 357 (363)
+||+|++|||.+||++|| ++.| .++++|+++ ++ |.+++|+||||+|+|++|+++||||+||+|+|+ .+
T Consensus 420 sGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~e------r~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~i 492 (498)
T 3qb0_A 420 TGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIE------RQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERL 492 (498)
T ss_dssp ESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGG------GGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHH
T ss_pred eCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCc------cCccEEcccEEEecCcchhceEEEHHHHhhhCcHhh
Confidence 999999999999999999 8888 789999987 56 999999999999999999999999999999999 99
Q ss_pred hhcccC
Q 017944 358 VHRKCF 363 (363)
Q Consensus 358 ~~rk~~ 363 (363)
++|||-
T Consensus 493 v~~kc~ 498 (498)
T 3qb0_A 493 LNDRFR 498 (498)
T ss_dssp HHHTTC
T ss_pred ccccCc
Confidence 999983
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=4.2e-76 Score=558.60 Aligned_cols=354 Identities=41% Similarity=0.634 Sum_probs=320.1
Q ss_pred CccEEEEcCCCcEEEeecCCCCCCceecccceeecc----------CCCccccCcccccC-Cce-eccccCCeecCHHHH
Q 017944 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL----------EDGSSSVDNSTLVE-DVT-VDPVVRGFIRDWDAM 68 (363)
Q Consensus 1 m~~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~----------~~~~~g~~~~~~~~-~~~-~~p~~~g~i~~~~~~ 68 (363)
+++||||+||+++|+||+ +++.|++++||++++.. ++.++| +++...+ .+. ++|+++|.|.||+.+
T Consensus 5 ~~~ivID~Gs~~~k~G~~-~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG-~~a~~~~~~~~~~~Pi~~G~i~d~d~~ 82 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG-DEAQSKRGILTLKYPIEHGIITNWDDM 82 (375)
T ss_dssp CCCEEEEECSSEEEEEET-TCSSCSEEEECCEEEECTTTC-------CCEEH-HHHHHHTTSEEEECSEETTEECCHHHH
T ss_pred CceEEEECCCCeEEEEEC-CCCCCceeeccccccccccccccCCCCCCeEec-hhHhhcCcccceeccccCCcccCHHHH
Confidence 478999999999999999 99999999999998642 245788 8775555 344 599999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCCCceEEEEecCCCceE
Q 017944 69 EDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKID 148 (363)
Q Consensus 69 ~~i~~~~~~~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~ 148 (363)
+.+|+|+|.+.|++++ .++|+++++|++++..+|+++++++||.+++++++++++|+||+|++|.++++|||+|+++|+
T Consensus 83 e~i~~~~~~~~L~~~~-~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 83 EKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHTTSCCCG-GGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHhcCCCC-cCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 9999999988899998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCc--cccHHHHHHHHHHcccccCC-HHHHHHhcc-cCCCceeE
Q 017944 149 IAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSV--NLSLYDVEKLKEQFSCCAED-ELAYEKTQK-SCEIEQHT 224 (363)
Q Consensus 149 v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~--~~~~~~~~~iK~~~~~v~~~-~~~~~~~~~-~~~~~~~~ 224 (363)
|+||++|+++.++..++++||+++|++|.++|..+++++ ..+.+.++++|+++|+++.+ .++.++... +.....|.
T Consensus 162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 241 (375)
T 2fxu_A 162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 241 (375)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence 999999999998888999999999999999999887776 34678999999999999887 344433322 22346899
Q ss_pred CCCCcEEEEeceeccccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh-ccC
Q 017944 225 LPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLC 303 (363)
Q Consensus 225 lp~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~ 303 (363)
+|||+.+.++.+|+.++|.||+|.+++.+..+|+++|.++|++||+++|+.+++|||||||+|++|||.+||++|| .+.
T Consensus 242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~ 321 (375)
T 2fxu_A 242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA 321 (375)
T ss_dssp CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 888
Q ss_pred CCCcceEEeCCCCCCCcCCcceeeeechhhhhccCCCCceeeehHHHhhcCccchhcccC
Q 017944 304 SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESGPSVVHRKCF 363 (363)
Q Consensus 304 ~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l~~~~~~~itk~ey~e~G~~~~~rk~~ 363 (363)
|...++++..+++ |.+++|+|||++|++++|+++||||+||+|+|+++++||||
T Consensus 322 p~~~~v~v~~~~~------p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 322 PSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp CTTCCCCEECCTT------TTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCeeEEEEcCCC------CCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 8888899998888 99999999999999999999999999999999999999996
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=1.7e-76 Score=564.12 Aligned_cols=350 Identities=31% Similarity=0.549 Sum_probs=156.7
Q ss_pred ccEEEEcCCCcEEEeecCCCCCCceecccceeecc------------CCCccccCcccccC-Cce-eccccCCeecCHHH
Q 017944 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL------------EDGSSSVDNSTLVE-DVT-VDPVVRGFIRDWDA 67 (363)
Q Consensus 2 ~~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~------------~~~~~g~~~~~~~~-~~~-~~p~~~g~i~~~~~ 67 (363)
++||||+||+++|+||+ |++.|++++||++++.. ++.++| +++...+ .+. ++|+++|.|.|||.
T Consensus 7 ~~ivID~Gs~~~k~G~a-g~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG-~ea~~~~~~~~~~~Pi~~G~i~dwd~ 84 (394)
T 1k8k_B 7 KVVVCDNGTGFVKCGYA-GSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVG-DEASELRSMLEVNYPMENGIVRNWDD 84 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEECCCCeEEEeeC-CCCCcceeccceeEEEcccccccccCCCCCCeEEC-hHHHhcCCCceeeccccCCEEecHHH
Confidence 78999999999999999 99999999999997632 245689 8876555 344 59999999999999
Q ss_pred HHHHHHHHH-hhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCCCceEEEEecCCCc
Q 017944 68 MEDLLHHVL-YAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGK 146 (363)
Q Consensus 68 ~~~i~~~~~-~~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~ 146 (363)
++.+|+|+| .+.|++++ .++|+++++|++++...|+++++++||.|++++++++++|+||+|++|.++|+|||+|+++
T Consensus 85 ~e~i~~~~~~~~~L~~~~-~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~ 163 (394)
T 1k8k_B 85 MKHLWDYTFGPEKLNIDT-RNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGV 163 (394)
T ss_dssp ----------------------------------------------------------------------CCEEEECSSC
T ss_pred HHHHHHHHhcccccCcCC-CCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCc
Confidence 999999999 78899998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCcc--ccHHHHHHHHHHcccccCC-HHHHHHhc-ccCCCce
Q 017944 147 IDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVN--LSLYDVEKLKEQFSCCAED-ELAYEKTQ-KSCEIEQ 222 (363)
Q Consensus 147 t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~--~~~~~~~~iK~~~~~v~~~-~~~~~~~~-~~~~~~~ 222 (363)
|+|+||++|+++.+++.++++||+++|++|.++|..+++++. .+.+.++++|+++|+++.+ ..+.+... .+.....
T Consensus 164 T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~ 243 (394)
T 1k8k_B 164 THICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVES 243 (394)
T ss_dssp EEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEE
T ss_pred eEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCceE
Confidence 999999999999999899999999999999999998888773 6789999999999999987 33443322 1223467
Q ss_pred eECCCCcEEEEeceeccccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh-c
Q 017944 223 HTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-G 301 (363)
Q Consensus 223 ~~lp~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~ 301 (363)
|.+|||+.+.++.+|+.++|.||+|++++.+..+|+++|.++|.+||+|+|+.+++|||||||+|++|||.+||++|| .
T Consensus 244 ~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~ 323 (394)
T 1k8k_B 244 YTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQ 323 (394)
T ss_dssp EECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHH
T ss_pred EECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred cC-----------CCCcceEEeCCCCCCCcCCcceeeeechhhhhccCCCC-ceeeehHHHhhcCccchhc
Q 017944 302 LC-----------SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQ-NQHITKADYDESGPSVVHR 360 (363)
Q Consensus 302 ~~-----------~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l~~~~-~~~itk~ey~e~G~~~~~r 360 (363)
+. |..+++++..+++ |.+++|+|||++|++++|+ ++||||+||+|+|+++++|
T Consensus 324 ~~~~~~~~~~~~~p~~~~v~v~~~~~------~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 324 LYLERVLKGDVEKLSKFKIRIEDPPR------RKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHTCSSCCCTTCCCCC----------------------------------------------------
T ss_pred HHhhhhcccccCCCCceEEEEecCCC------cceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 76 7777899988888 9999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-74 Score=577.44 Aligned_cols=354 Identities=19% Similarity=0.287 Sum_probs=277.8
Q ss_pred cEEEEcCCCcEEEeecCCCCCCceecccceeecc----------------------------------------------
Q 017944 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL---------------------------------------------- 36 (363)
Q Consensus 3 ~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~---------------------------------------------- 36 (363)
.||||+||+++|+||| ||..|+. +|+++++..
T Consensus 17 iIVIdpGS~~~riG~A-~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (593)
T 4fo0_A 17 IIVIHPGSTTLRIGRA-TDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSNG 94 (593)
T ss_dssp EEEEECCSSEEEEEET-TCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTTS
T ss_pred EEEEeCCCCCeEeeec-CCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhcc
Confidence 6899999999999999 9999975 599997521
Q ss_pred -------------------------------------CCCccccCccccc---CCce-eccccCC-----------eecC
Q 017944 37 -------------------------------------EDGSSSVDNSTLV---EDVT-VDPVVRG-----------FIRD 64 (363)
Q Consensus 37 -------------------------------------~~~~~g~~~~~~~---~~~~-~~p~~~g-----------~i~~ 64 (363)
.+.++| ++|... ..+. .|||++| .+.+
T Consensus 95 ~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG-~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 95 TRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVG-EEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp CCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEET-HHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred cccCCCcHHHhhhhhccCCCcccCCCCcccccccccccccccc-HHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 123566 665322 2455 4999999 4779
Q ss_pred HHHHHHHHHHHHhhccCCCCCCC---ceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCCCceEEEEe
Q 017944 65 WDAMEDLLHHVLYAGLGWEEGNE---GQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVD 141 (363)
Q Consensus 65 ~~~~~~i~~~~~~~~l~~~~~~~---~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVD 141 (363)
|+++|.||+|+|.++|++++ ++ +|+||++|+++++..|++++|++||.|++|+++++++++||+||+|++||||||
T Consensus 174 wdd~e~iw~~~~~~~L~i~~-~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVD 252 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPL-KDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVD 252 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCG-GGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCc-hhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEE
Confidence 99999999999999999987 55 999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCc-------cccHHHHHHHHHHcccccCCHHHHHH-
Q 017944 142 IGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSV-------NLSLYDVEKLKEQFSCCAEDELAYEK- 213 (363)
Q Consensus 142 iG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~-------~~~~~~~~~iK~~~~~v~~~~~~~~~- 213 (363)
+|++.|+|+||+||+++.+++.++++||+++|++|.++|..+++.+ ..+.+++++||+++||++.+....+.
T Consensus 253 iG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~ 332 (593)
T 4fo0_A 253 VGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDH 332 (593)
T ss_dssp ECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEE
T ss_pred eCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhh
Confidence 9999999999999999999999999999999999999999988765 23578999999999999875110000
Q ss_pred -----------------------------h-------------------------------------------cccCCCc
Q 017944 214 -----------------------------T-------------------------------------------QKSCEIE 221 (363)
Q Consensus 214 -----------------------------~-------------------------------------------~~~~~~~ 221 (363)
+ .......
T Consensus 333 ~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (593)
T 4fo0_A 333 EFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRK 412 (593)
T ss_dssp EEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC---------------------------------
T ss_pred hhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhcccccc
Confidence 0 0001125
Q ss_pred eeECCCCcEEEEeceeccccccccCCCCC--------------------------------CcccccHHHHHHHHHHcCC
Q 017944 222 QHTLPDGQVIRIGKERYTVGEALFQPSIL--------------------------------GLEAHGIVEQLVHTISTVS 269 (363)
Q Consensus 222 ~~~lp~~~~i~i~~~r~~~~E~lF~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~ 269 (363)
.+.+|+|..+.++.+|+.++|.||+|... +.+..||+++|.++|.+|+
T Consensus 413 ~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~ 492 (593)
T 4fo0_A 413 SASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCS 492 (593)
T ss_dssp ----------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCS
T ss_pred cccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCC
Confidence 67889999999999999999999999642 1234689999999999998
Q ss_pred -hhHHHHhhcCeEEccCcccccchHHHHHhhh-ccCCCCc-----ceEEeCCCCCCCcCCcceeeeechhhhhccCCCCc
Q 017944 270 -SENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAI-----RPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQN 342 (363)
Q Consensus 270 -~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~~~~~-----~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l~~~~~ 342 (363)
.|+|+.|++|||||||+|++|||.+||++|| ++.|..+ +++|+++|..+ +|.+++|+||||+|+|++|++
T Consensus 493 ~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~---d~~~~aW~GgSilasL~~f~~ 569 (593)
T 4fo0_A 493 SDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDM---DPRLIAWKGGAVLACLDTTQE 569 (593)
T ss_dssp SHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGC---CTTTHHHHHHHHHHHCGGGGG
T ss_pred cHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCC---CCceeeehhhHHHhcCccHHH
Confidence 5999999999999999999999999999999 8887643 58999887311 289999999999999999999
Q ss_pred eeeehHHHhhcCccchhcccC
Q 017944 343 QHITKADYDESGPSVVHRKCF 363 (363)
Q Consensus 343 ~~itk~ey~e~G~~~~~rk~~ 363 (363)
+||||+||+|+|+++|+|||+
T Consensus 570 ~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 570 LWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp TCEEHHHHHHHTTHHHHHHCS
T ss_pred eeECHHHHHhhCcHHHhhcCC
Confidence 999999999999999999995
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=6.9e-72 Score=537.50 Aligned_cols=352 Identities=29% Similarity=0.436 Sum_probs=316.0
Q ss_pred CccEEEEcCCCcEEEeecCCCCCCceecccceeeccC------------------CCccccCcccccCCce-eccccCCe
Q 017944 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLE------------------DGSSSVDNSTLVEDVT-VDPVVRGF 61 (363)
Q Consensus 1 m~~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~~------------------~~~~g~~~~~~~~~~~-~~p~~~g~ 61 (363)
+++||||+||+++|+||+ +++.|++++||+++.... +.++| +++...+.+. ++|+++|.
T Consensus 5 ~~~ivID~Gs~~~k~G~~-~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG-~~a~~~~~~~~~~pi~~G~ 82 (418)
T 1k8k_A 5 LPACVVDCGTGYTKLGYA-GNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIG-DEAIEKPTYATKWPIRHGI 82 (418)
T ss_dssp SCCEEEEECSSEEEEEET-TCSSCSEEEESCEEECC-----------CCCTTGGGCEEEG-GGGTSCTTSEEECCEETTE
T ss_pred CCeEEEECCCCeEEEeeC-CCCCCCCcCCceEEEECcccccccccccccccccccCeEEC-hHHHhcCCCEEeccccCCE
Confidence 367999999999999999 999999999999986421 25788 8876555555 59999999
Q ss_pred ecCHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhcc---------C
Q 017944 62 IRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYA---------V 132 (363)
Q Consensus 62 i~~~~~~~~i~~~~~~~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~---------~ 132 (363)
+.|||.++.+|+|+|.+.|++++ .++++++++|++++..+|+++.+++||.+|+++++++++|+||+|+ .
T Consensus 83 i~d~d~~e~i~~~~~~~~L~~~~-~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 83 VEDWDLMERFMEQVIFKYLRAEP-EDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp ESCHHHHHHHHHHHHHTTTCCCG-GGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred ECCHHHHHHHHHHHHHhccCCCC-CCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 99999999999999988899888 8999999999999999999999999999999999999999999999 5
Q ss_pred CCceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCc--cccHHHHHHHHHHcccccCC-HH
Q 017944 133 GRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSV--NLSLYDVEKLKEQFSCCAED-EL 209 (363)
Q Consensus 133 g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~--~~~~~~~~~iK~~~~~v~~~-~~ 209 (363)
+. +|+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|.++++++ ..+.+.++++|+++|+++.+ .+
T Consensus 162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~ 240 (418)
T 1k8k_A 162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240 (418)
T ss_dssp CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence 66 9999999999999999999999999999999999999999999999887765 35678999999999999987 34
Q ss_pred HHHHhccc--CCCceeECCCCc-----EEEEeceeccccccccCCCCCCccc-ccHHHHHHHHHHcCChhHHHHhhcCeE
Q 017944 210 AYEKTQKS--CEIEQHTLPDGQ-----VIRIGKERYTVGEALFQPSILGLEA-HGIVEQLVHTISTVSSENHRQLLENTV 281 (363)
Q Consensus 210 ~~~~~~~~--~~~~~~~lp~~~-----~i~i~~~r~~~~E~lF~p~~~~~~~-~~l~~~I~~~i~~~~~~~r~~l~~nIv 281 (363)
++++.... .....|.+||+. .+.++.+|+.++|.||+|++++.+. .+|+++|.++|++||.++|+.+++|||
T Consensus 241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv 320 (418)
T 1k8k_A 241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV 320 (418)
T ss_dssp HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence 44332211 112579999988 8999999999999999999888775 799999999999999999999999999
Q ss_pred EccCcccccchHHHHHhhh-ccC----------------CCCcceEEeCCCCCCCcCCcceeeeechhhhhccCCCCcee
Q 017944 282 LCGGTTSMTGFEDRFQKEA-GLC----------------SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 344 (363)
Q Consensus 282 l~GG~s~l~G~~~rL~~eL-~~~----------------~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l~~~~~~~ 344 (363)
||||+|++|||.+||++|| .+. |...++++..+++ |.+++|+|||++|++++|+++|
T Consensus 321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~------~~~~~w~Ggsilasl~~f~~~~ 394 (418)
T 1k8k_A 321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHM------QRYAVWFGGSMLASTPEFYQVC 394 (418)
T ss_dssp EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTT------CTTHHHHHHHHHTTSHHHHHHS
T ss_pred EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCc------cccceeHhHHHHHcCccHhheE
Confidence 9999999999999999999 654 6677899999888 9999999999999999999999
Q ss_pred eehHHHhhcCccchhccc
Q 017944 345 ITKADYDESGPSVVHRKC 362 (363)
Q Consensus 345 itk~ey~e~G~~~~~rk~ 362 (363)
|||+||+|+|+++++|||
T Consensus 395 itk~ey~e~G~~~~~~~~ 412 (418)
T 1k8k_A 395 HTKKDYEEIGPSICRHNP 412 (418)
T ss_dssp EEHHHHHHHCGGGGGCCC
T ss_pred EEHHHHhhhCHHHHhhhc
Confidence 999999999999999986
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=3.4e-61 Score=467.20 Aligned_cols=311 Identities=21% Similarity=0.352 Sum_probs=261.4
Q ss_pred ccccCccccc-C-Cce-eccccCCeec----C-------HHHHHHHHHHHHhh-ccCCCCCC---CceEEEEcCCCCCHH
Q 017944 40 SSSVDNSTLV-E-DVT-VDPVVRGFIR----D-------WDAMEDLLHHVLYA-GLGWEEGN---EGQILFTDPLCSPKA 101 (363)
Q Consensus 40 ~~g~~~~~~~-~-~~~-~~p~~~g~i~----~-------~~~~~~i~~~~~~~-~l~~~~~~---~~~v~l~~~~~~~~~ 101 (363)
+|| ++|... + .+. +||+++|.|. | ||.++.+|+|+|.+ +|++++ . ++|++|++|+++++.
T Consensus 158 ~VG-dEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~WD~mE~Iw~y~f~~~~L~V~p-~~~~e~pVLLTEPplnp~~ 235 (655)
T 4am6_A 158 YYG-SDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKP-TKFNQYKVVLVIPDIFKKS 235 (655)
T ss_dssp EEH-HHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHHHHHHHHHHHHHBSSSCBCCG-GGGGGCEEEEEECTTCCHH
T ss_pred EEe-hHHhhCCccCeEEeccccCCEecccCCccccccccHHHHHHHHHHHhccccccccc-cccCCCcEEEEeCCCCCHH
Confidence 456 665442 2 455 4999999998 8 99999999999984 798887 5 799999999999999
Q ss_pred HHHHHHHHhhcccCCCeEEEecchhhhhccCC-CceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHH
Q 017944 102 VREQLVQLMFETFNISGFYSSEQAVLSLYAVG-RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 180 (363)
Q Consensus 102 ~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g-~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l 180 (363)
.|++++|++||.|++|+++++.+++||+||+| .++|||||+|++.|+|+||++|+++.+++.++++||+++|++|.++|
T Consensus 236 ~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL 315 (655)
T 4am6_A 236 HVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFL 315 (655)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 69999999999999999999999999999999999999999999999
Q ss_pred hccCC-----Cc--cccHHHHHHHHHHccccc-CCHHHHHHhcccCCCcee--ECCCC----cEEEEeceeccccccccC
Q 017944 181 GKTNP-----SV--NLSLYDVEKLKEQFSCCA-EDELAYEKTQKSCEIEQH--TLPDG----QVIRIGKERYTVGEALFQ 246 (363)
Q Consensus 181 ~~~~~-----~~--~~~~~~~~~iK~~~~~v~-~~~~~~~~~~~~~~~~~~--~lp~~----~~i~i~~~r~~~~E~lF~ 246 (363)
.++++ ++ ..+.+++++|||++|||+ .|- +++ ...| ..|++ +.+.++.|||.+||.||+
T Consensus 316 ~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di-~~q-------~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~ 387 (655)
T 4am6_A 316 LQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADV-AVQ-------LYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFF 387 (655)
T ss_dssp HHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGC-CSE-------EEEEEECCSSSCEEEEEEEESSHHHHHHHGGGS
T ss_pred HHcCCCccccCCCCcchHHHHHHHHHheEEEcccch-hhh-------hhcceeccCCCCCcceEEEECCeehhCchhcCC
Confidence 99986 33 456889999999999995 331 111 1122 23553 578899999999999999
Q ss_pred CCCCCcc-------------------------------------------------------------------------
Q 017944 247 PSILGLE------------------------------------------------------------------------- 253 (363)
Q Consensus 247 p~~~~~~------------------------------------------------------------------------- 253 (363)
|.+++..
T Consensus 388 Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (655)
T 4am6_A 388 PQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYG 467 (655)
T ss_dssp THHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCS
T ss_pred hhhcccccccccccchhhhhcCccccccCCCCCCccchhHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccc
Confidence 9864210
Q ss_pred ------cccHHHHHHHHHHc-C-ChhHHH--HhhcCeEEccCcccccchHHHHHhhh-ccCCC-----------------
Q 017944 254 ------AHGIVEQLVHTIST-V-SSENHR--QLLENTVLCGGTTSMTGFEDRFQKEA-GLCSS----------------- 305 (363)
Q Consensus 254 ------~~~l~~~I~~~i~~-~-~~~~r~--~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~~~----------------- 305 (363)
..+|..+|.+||.. | ..|.++ ++++||+++||+|++|||...|+..| ...|.
T Consensus 468 ~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~ 547 (655)
T 4am6_A 468 NTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKE 547 (655)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHh
Confidence 14889999999984 3 225554 99999999999999999998888777 21110
Q ss_pred --------------------------------------------------CcceEEeCCCCCCCcCCcceeeeechhhhh
Q 017944 306 --------------------------------------------------AIRPTLVKPPEYMPENLTLYSAWIGGAILA 335 (363)
Q Consensus 306 --------------------------------------------------~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a 335 (363)
-++|+|+.+|..|. |++++|+|||+||
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d---~~~~~W~GgSvla 624 (655)
T 4am6_A 548 IKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMN---PALIIWKGASVLA 624 (655)
T ss_dssp HHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCTTSC---GGGHHHHHHHHHT
T ss_pred hhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCccccC---cceeEEecceeee
Confidence 13589999998443 5999999999999
Q ss_pred ccCCCCceeeehHHHhhcCccchhcccC
Q 017944 336 KVVFPQNQHITKADYDESGPSVVHRKCF 363 (363)
Q Consensus 336 ~l~~~~~~~itk~ey~e~G~~~~~rk~~ 363 (363)
+|++|+++||||+||+|+|++++++||+
T Consensus 625 ~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 625 QIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp TSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred ecccHhheeecHHHHhhhcchheEeccc
Confidence 9999999999999999999999999984
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=5.7e-36 Score=280.30 Aligned_cols=308 Identities=16% Similarity=0.184 Sum_probs=237.4
Q ss_pred ccEEEEcCCCcEEEeecCCCCCCceecccceeeccC--C-CccccCcccccC-----Cce-eccccCCeecCHHHHHHHH
Q 017944 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLE--D-GSSSVDNSTLVE-----DVT-VDPVVRGFIRDWDAMEDLL 72 (363)
Q Consensus 2 ~~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~~--~-~~~g~~~~~~~~-----~~~-~~p~~~g~i~~~~~~~~i~ 72 (363)
++|+||+||+++++|++ ++. |...+||+++...+ + .++| ++|.... +.. .+|+++|.+.||+..+++|
T Consensus 4 ~~igIDlGT~~s~v~~~-~~~-~~~~~PS~v~~~~~~~~~~~vG-~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~i~ 80 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR-GKG-IVVNEPSVIAIDSTTGEILKVG-LEAKNMIGKTPATIKAIRPMRDGVIADYTVALVML 80 (344)
T ss_dssp CEEEEEECSSEEEEEET-TTE-EEEEEESCEEEETTTCCEEEES-HHHHTTTTCCCTTEEEECCEETTEESSHHHHHHHH
T ss_pred ceEEEEcCcCcEEEEEC-CCC-EEEeeCcEEEEecCCCcEEEEc-HHHHHhcccCCCCeEEEecCCCCeeCChHHHHHHH
Confidence 46889999999999999 764 77889999987544 3 4689 7774432 233 4899999999999999999
Q ss_pred HHHHhhccCCC-CCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCCC-----ceEEEEecCCCc
Q 017944 73 HHVLYAGLGWE-EGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGR-----ISGCTVDIGHGK 146 (363)
Q Consensus 73 ~~~~~~~l~~~-~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglVVDiG~~~ 146 (363)
.+++.+..... . .+.++++++|+.++..+|+.+.+ +++.+|++.+.++++|.||+++++. .+.+|||+|+++
T Consensus 81 ~~~l~~~~~~~~~-~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggt 158 (344)
T 1jce_A 81 RYFINKAKGGMNL-FKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGT 158 (344)
T ss_dssp HHHHHHHHTSCCS-CCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSC
T ss_pred HHHHHHHhhcccc-CCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCe
Confidence 99996533323 4 46889999999999999998888 4699999999999999999999986 689999999999
Q ss_pred eEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCccccHHHHHHHHHHcccccCCHHHHHHhcccCCCceeECC
Q 017944 147 IDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLP 226 (363)
Q Consensus 147 t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp 226 (363)
|+++++..|.++.. ...++||+++++.|.+++.++ +....+.+.+|++|+.+|+...+...... ..+.....+.
T Consensus 159 tdvsv~~~~~~~~~--~~~~lGG~~id~~l~~~l~~~-~~~~~~~~~ae~~K~~l~~~~~~~~~~~~---~~~~~~~~~~ 232 (344)
T 1jce_A 159 TEVAVISLGSIVTW--ESIRIAGDEMDEAIVQYVRET-YRVAIGERTAERVKIEIGNVFPSKENDEL---ETTVSGIDLS 232 (344)
T ss_dssp EEEEEEETTEEEEE--EEESCSHHHHHHHHHHHHHHH-HCEECCHHHHHHHHHHHCBCSCCHHHHHC---EEEEEEEETT
T ss_pred EEEEEEEcCCEEee--CCCCccChhHHHHHHHHHHHH-hCcccCHHHHHHHHHHHhccCccccCCcc---eEEEeccccC
Confidence 99999999988753 568999999999999988754 23346788999999999987655211000 0000011233
Q ss_pred CCc--EEEEeceeccccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhh-cCeEEccCcccccchHHHHHhhhccC
Q 017944 227 DGQ--VIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLL-ENTVLCGGTTSMTGFEDRFQKEAGLC 303 (363)
Q Consensus 227 ~~~--~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~-~nIvl~GG~s~l~G~~~rL~~eL~~~ 303 (363)
+|. .+.++.+++. .+|+|. ...+.+.|.+++++++.+.+.+++ ++|+|+||+|++|||.++|++++.
T Consensus 233 ~g~~~~~~i~~~~~~---~~~~~~-----~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~-- 302 (344)
T 1jce_A 233 TGLPRKLTLKGGEVR---EALRSV-----VVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETG-- 302 (344)
T ss_dssp TTEEEEEEEEHHHHH---HHTHHH-----HHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHS--
T ss_pred CCCceeEEEeHHHHH---HHHHHH-----HHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHC--
Confidence 554 4455544433 344442 246889999999999988888888 799999999999999999999992
Q ss_pred CCCcceEEeCCCCCCCcCCcceeeeechhhhhc-cCCCC
Q 017944 304 SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK-VVFPQ 341 (363)
Q Consensus 304 ~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~-l~~~~ 341 (363)
.++.+ .++ |.+++|.||++++. +++|+
T Consensus 303 ---~~v~~--~~~------p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 303 ---ISVIR--SEE------PLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp ---SCEEE--CSS------TTTHHHHHHHHGGGCHHHHT
T ss_pred ---CCccc--cCC------hHHHHHHHHHHHHhChHHHH
Confidence 23333 344 67999999999998 45553
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.92 E-value=2.8e-24 Score=194.22 Aligned_cols=243 Identities=17% Similarity=0.174 Sum_probs=180.5
Q ss_pred cEEEEcCCCcEEEeecCCCCCCceecccceeeccCCCccccCcccccCCceeccccCCeecCHHHHHHHHHHHHhhccCC
Q 017944 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVDPVVRGFIRDWDAMEDLLHHVLYAGLGW 82 (363)
Q Consensus 3 ~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~~~~~~g~~~~~~~~~~~~~p~~~g~i~~~~~~~~i~~~~~~~~l~~ 82 (363)
.++||+||.++|+.+. .++. .. ++ .+ .. ...|+++|.+.||+.++.+|++++......
T Consensus 30 ~~gIDiGS~s~k~vi~-~~~~-~~-----l~-------~~-~~-------~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~ 87 (272)
T 3h1q_A 30 KVGVDLGTADIVLVVT-DQEG-IP-----VA-------GA-LK-------WASVVKDGLVVDYIGAIQIVRELKAKVERL 87 (272)
T ss_dssp EEEEECCSSEEEEEEE-CTTC-CE-----EE-------EE-EE-------ECCCCBTTBCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcccceEEEEEE-CCCC-cE-----EE-------EE-ee-------cccccCCCEEEcHHHHHHHHHHHHHHHHHh
Confidence 4689999999999987 3322 11 11 01 00 136899999999999999999998653322
Q ss_pred CCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCCCceEEEEecCCCceEEEEeecCeecccce
Q 017944 83 EEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIAS 162 (363)
Q Consensus 83 ~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~ 162 (363)
.......++++.|.......| +.++.+++.+|++...+..++.|+++++|..+++|||+|+++|+++++.+|.++..
T Consensus 88 ~~~~~~~~v~tvp~~~~~~~~-~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~~-- 164 (272)
T 3h1q_A 88 LGSELFQAATAIPPGTVGRNA-EACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIAVIEKGKITAT-- 164 (272)
T ss_dssp SSSCCCEEEEECCSCC---CT-THHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEEE--
T ss_pred cCCccCeEEEEcCCCCCHHHH-HHHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEEE--
Confidence 121335577777777666555 45666889999999999999999999999999999999999999999999998854
Q ss_pred EEeeccHHHHHHHHHHHHhccCCCccccHHHHHHHHHHcccccCCHHHHHHhcccCCCceeECCCCcEEEEeceeccccc
Q 017944 163 RRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLPDGQVIRIGKERYTVGE 242 (363)
Q Consensus 163 ~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~i~i~~~r~~~~E 242 (363)
..+++||.++++.+.+.+. .+.+.++++|++++ +..++.. +.+
T Consensus 165 ~~~~~Gg~~~~~~l~~~l~-------~~~~~ae~~k~~~~----~~~~~~~--------------------------~~~ 207 (272)
T 3h1q_A 165 FDEPTGGTHLSLVLAGSYK-------IPFEEAETIKKDFS----RHREIMR--------------------------VVR 207 (272)
T ss_dssp CCBSCCHHHHHHHHHHHHT-------CCHHHHHHHHHSST----THHHHHH--------------------------HHH
T ss_pred ecCCCcHHHHHHHHHHHhC-------CCHHHHHHHHHhcC----CHHHHHH--------------------------HHH
Confidence 5589999999999999887 67789999998865 1111111 011
Q ss_pred cccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCC
Q 017944 243 ALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENL 322 (363)
Q Consensus 243 ~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~ 322 (363)
.++ ..+.+.+.+.+++++ ..++|+|+||+|++|||.++|++++ ...+..+++
T Consensus 208 ~~~---------~~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l-------~~~v~~~~~------ 259 (272)
T 3h1q_A 208 PVI---------EKMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFL-------GKEVQVPIH------ 259 (272)
T ss_dssp HHH---------HHHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHH-------SSCCBCCSS------
T ss_pred HHH---------HHHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHh-------CCCccccCC------
Confidence 111 347777777777776 1358999999999999999999999 222333445
Q ss_pred cceeeeechhhhh
Q 017944 323 TLYSAWIGGAILA 335 (363)
Q Consensus 323 ~~~~~w~Gasi~a 335 (363)
|.+++|+||+++|
T Consensus 260 p~~a~a~Gaal~a 272 (272)
T 3h1q_A 260 PLLVTPLGIALFG 272 (272)
T ss_dssp GGGHHHHHHHTTC
T ss_pred hHHHHHHHHHhcC
Confidence 8899999999875
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.91 E-value=4.6e-24 Score=209.21 Aligned_cols=291 Identities=15% Similarity=0.180 Sum_probs=198.4
Q ss_pred Cc-cEEEEcCCCcEEEeecCCCCCCcee--------cccceeeccCCCccccCcccccC---C--c-e-e----cccc--
Q 017944 1 ME-AAVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRVLEDGSSSVDNSTLVE---D--V-T-V----DPVV-- 58 (363)
Q Consensus 1 m~-~vViD~Gs~~~k~G~~~ge~~P~~~--------~ps~~~~~~~~~~~g~~~~~~~~---~--~-~-~----~p~~-- 58 (363)
|. +|.||+||++++++++ .+..|..+ +||+++...++.++| ++|.... . + . + +|++
T Consensus 1 m~~~iGIDlGTt~s~va~~-~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG-~~A~~~~~~~p~~~~~~Kr~lg~p~~~~ 78 (509)
T 2v7y_A 1 MSKIIGIDLGTTNSCVAVL-EGGEVKVIPNPEGNRTTPSVVAFKNGERLVG-EVAKRQAITNPNTIISIKRHMGTDYKVE 78 (509)
T ss_dssp CCCEEEEEECSSEEEEEEE-ETTEEEECCCTTSCSSEECEEEESSSSEEES-HHHHTTTTTCSSEEECGGGTTTSCCCEE
T ss_pred CCCEEEEEcCCceEEEEEE-ECCEEEEEECCCCCcccceEEEECCCcEEEC-HHHHHhHHhCCCcHHHHHHhcCCCcEEE
Confidence 44 5679999999999999 67678777 899988755567788 6653221 1 1 0 1 2666
Q ss_pred -CCeecCHHHHHHHHHHHHhhccC------CCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhcc
Q 017944 59 -RGFIRDWDAMEDLLHHVLYAGLG------WEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYA 131 (363)
Q Consensus 59 -~g~i~~~~~~~~i~~~~~~~~l~------~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~ 131 (363)
+|. +|. .++++.+++.+ +. ... ....++++.|.+++..+|+.+.+. ++.+|++.+.++++|.||+++
T Consensus 79 ~~g~--~~~-~~ei~a~~L~~-l~~~ae~~l~~-~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~AAAla 152 (509)
T 2v7y_A 79 IEGK--QYT-PQEISAIILQY-LKSYAEDYLGE-PVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPTAAALA 152 (509)
T ss_dssp ETTE--EEC-HHHHHHHHHHH-HHHHHHHHHTS-CCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHH
T ss_pred ECCE--EEc-HHHHHHHHHHH-HHHHHHHHhCC-CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHHHHHHH
Confidence 664 333 34445444422 21 112 346799999999999999988876 588999999999999999999
Q ss_pred CCC-----ceEEEEecCCCceEEEEee--cCee-cccceEEeeccHHHHHHHHHHHHhcc-----CCCcccc-------H
Q 017944 132 VGR-----ISGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGGMDLTKLLAQELGKT-----NPSVNLS-------L 191 (363)
Q Consensus 132 ~g~-----~tglVVDiG~~~t~v~pv~--dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~-------~ 191 (363)
+|. .+.+|+|+|+++++++.+. +|.. +.......++||.++++.|.+++.++ +.++..+ .
T Consensus 153 y~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~ 232 (509)
T 2v7y_A 153 YGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLK 232 (509)
T ss_dssp TTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHH
T ss_pred HhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHH
Confidence 885 4789999999999999876 4543 22223446899999999998887643 3333211 3
Q ss_pred HHHHHHHHHcccccCCHHHHHHhcccCCCceeECC------CC---cEEEEeceeccccccccCCCCCCcccccHHHHHH
Q 017944 192 YDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLP------DG---QVIRIGKERYTVGEALFQPSILGLEAHGIVEQLV 262 (363)
Q Consensus 192 ~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp------~~---~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~ 262 (363)
+.+|++|+.++.... ..+.+| +| ..+.++.+.+ |-+|+|. ...+.+.|.
T Consensus 233 ~~aE~~K~~ls~~~~--------------~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~-----~~~i~~~i~ 290 (509)
T 2v7y_A 233 DAAEKAKKELSGVTQ--------------TQISLPFISANENGPLHLEMTLTRAKF---EELSAHL-----VERTMGPVR 290 (509)
T ss_dssp HHHHHHHHHTTTCSE--------------EEEEEEEEEEETTEEEEEEEEEEHHHH---HHHTHHH-----HHTTHHHHH
T ss_pred HHHHHHHHhcCCCCc--------------EEEEEeccccCCCCCeeEEEEEEHHHH---HHHHHHH-----HHHHHHHHH
Confidence 567888888765421 122222 23 1233433332 2333332 134777788
Q ss_pred HHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhc
Q 017944 263 HTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 336 (363)
Q Consensus 263 ~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~ 336 (363)
+++..+.. .....++|+|+||+|++|++.++|++.+. ..+....+ |..++|.||+++|.
T Consensus 291 ~~L~~a~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~-------~~~~~~~~------p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 291 QALQDAGL--TPADIDKVILVGGSTRIPAVQEAIKRELG-------KEPHKGVN------PDEVVAIGAAIQGG 349 (509)
T ss_dssp HHHHHHTC--CGGGCSEEEEESGGGGCHHHHHHHHHHHS-------SCCBCCSC------TTTHHHHHHHHHHH
T ss_pred HHHHHcCC--ChhHCcEEEEECCcccChHHHHHHHHHhC-------CCcCcCCC------chhhhHhhHHHHHH
Confidence 88877653 23446899999999999999999999992 12233444 77999999999986
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.90 E-value=4.3e-24 Score=202.49 Aligned_cols=300 Identities=16% Similarity=0.167 Sum_probs=193.1
Q ss_pred Ccc-EEEEcCCCcEEEeecCCCCCCcee--------cccceeecc-CCCccccCccccc-----CC--------------
Q 017944 1 MEA-AVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRVL-EDGSSSVDNSTLV-----ED-------------- 51 (363)
Q Consensus 1 m~~-vViD~Gs~~~k~G~~~ge~~P~~~--------~ps~~~~~~-~~~~~g~~~~~~~-----~~-------------- 51 (363)
|.. |-||+||+++.+++. .+..|..+ +||.++... ++..+| ++|... ..
T Consensus 1 m~~~vGIDlGTt~s~va~~-~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G-~~A~~~~~~~~~~~~~~~k~~lg~~~~ 78 (383)
T 1dkg_D 1 MGKIIGIDLGTTNSCVAIM-DGTTPRVLENAEGDRTTPSIIAYTQDGETLVG-QPAKRQAVTNPQNTLFAIKRLIGRRFQ 78 (383)
T ss_dssp --CCCEEECCSSEEEEEEE-ETTEEEECCCTTSCSEEECEEEECTTSCEEES-HHHHTTSTTCGGGEEECGGGTTTCBSC
T ss_pred CCcEEEEEcCCCCEEEEEE-ECCeeEEEECCCCCcccceEEEEECCCCEEEC-HHHHHhhhhCccceeehhHHhhCCCCC
Confidence 554 569999999999998 55445544 688877632 345566 443111 00
Q ss_pred -------ceecccc-------------CCe-ecCHHHHHHHHHHHHhh---ccCCCCCCCceEEEEcCCCCCHHHHHHHH
Q 017944 52 -------VTVDPVV-------------RGF-IRDWDAMEDLLHHVLYA---GLGWEEGNEGQILFTDPLCSPKAVREQLV 107 (363)
Q Consensus 52 -------~~~~p~~-------------~g~-i~~~~~~~~i~~~~~~~---~l~~~~~~~~~v~l~~~~~~~~~~r~~l~ 107 (363)
...+|++ +|. +...+....+++++... .+. . ....++++.|..++..+|+.+.
T Consensus 79 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~-~~~~~vitvP~~~~~~~r~~~~ 155 (383)
T 1dkg_D 79 DEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--E-PVTEAVITVPAYFNDAQRQATK 155 (383)
T ss_dssp SHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--S-CCCEEEECBCTTCCHHHHHHHH
T ss_pred cHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--C-CCCeEEEEECCCCCHHHHHHHH
Confidence 0012432 232 22234445555555422 232 2 3357999999999999998888
Q ss_pred HHhhcccCCCeEEEecchhhhhccCCCc------eEEEEecCCCceEEEEeecC------eec-ccceEEeeccHHHHHH
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAVGRI------SGCTVDIGHGKIDIAPVIEG------AVQ-HIASRRFEVGGMDLTK 174 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVDiG~~~t~v~pv~dG------~~~-~~~~~~~~~GG~~l~~ 174 (363)
+. ++..|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+..+ ... .......++||+++++
T Consensus 156 ~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 156 DA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 76 5889999999999999999987643 67999999999999988754 221 1122346899999999
Q ss_pred HHHHHHhcc-----CCCccc-------cHHHHHHHHHHcccccCCHHHHHHhcccCCCceeECCCC-c--EEEEeceecc
Q 017944 175 LLAQELGKT-----NPSVNL-------SLYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLPDG-Q--VIRIGKERYT 239 (363)
Q Consensus 175 ~l~~~l~~~-----~~~~~~-------~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~-~--~i~i~~~r~~ 239 (363)
.|.+++.++ +.++.. ..+.+|++|+.++......-++ ...+..++| . .+.++.+.+.
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i--------~~~~~~~~G~~~~~~~it~~~~~ 306 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL--------PYITADATGPKHMNIKVTRAKLE 306 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEE--------EEEEEETTEEEEEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEE--------ecccccCCCCeeEEEEEeHHHHH
Confidence 999887653 333211 1367888888877542110000 001223344 2 2344433332
Q ss_pred ccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCC
Q 017944 240 VGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMP 319 (363)
Q Consensus 240 ~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~ 319 (363)
-+|+|. ...+.+.|.+++.+++. +....++|+|+||+|++|++.++|++++. ..+...++
T Consensus 307 ---~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~-------~~v~~~~~--- 366 (383)
T 1dkg_D 307 ---SLVEDL-----VNRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFG-------KEPRKDVN--- 366 (383)
T ss_dssp ---HHSHHH-----HHHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHS-------SCCBCSSC---
T ss_pred ---HHHHHH-----HHHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhC-------CCCCCCcC---
Confidence 334332 14578888888888753 23446899999999999999999999992 12334445
Q ss_pred cCCcceeeeechhhhhcc
Q 017944 320 ENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 320 ~~~~~~~~w~Gasi~a~l 337 (363)
|.+++|.||+++|++
T Consensus 367 ---p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 367 ---PDEAVAIGAAVQGGV 381 (383)
T ss_dssp ---TTTHHHHHHHHHTTT
T ss_pred ---hHHHHHHHHHHHHHh
Confidence 789999999999874
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.89 E-value=6.1e-23 Score=195.20 Aligned_cols=294 Identities=16% Similarity=0.138 Sum_probs=183.9
Q ss_pred cEEEEcCCCcEEEeecCCCCCCcee--------cccceeeccCCCccccCcccccC--C--ceeccccCCe---------
Q 017944 3 AAVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRVLEDGSSSVDNSTLVE--D--VTVDPVVRGF--------- 61 (363)
Q Consensus 3 ~vViD~Gs~~~k~G~~~ge~~P~~~--------~ps~~~~~~~~~~~g~~~~~~~~--~--~~~~p~~~g~--------- 61 (363)
+|.||+||+++++++. .+..|..+ +||++....++.++| +.|.... + -.++.+++..
T Consensus 20 viGID~GTt~s~va~~-~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG-~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVM-KNGKTEILANEQGNRITPSYVAFTDDERLIG-DAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CEEEEECSSEEEEEEE-CSSCEEECCCTTSCSSEECCEEECSSCEEES-HHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred EEEEEeCcCcEEEEEE-ECCeeEEEECCCCCEeeceEEEEeCCcEEec-HHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 3789999999999999 66566554 388887765666777 5542110 0 0011111111
Q ss_pred ------------------------------ecCHHHHHHHHHHHHh---hccCCCCCCCceEEEEcCCCCCHHHHHHHHH
Q 017944 62 ------------------------------IRDWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLVQ 108 (363)
Q Consensus 62 ------------------------------i~~~~~~~~i~~~~~~---~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~e 108 (363)
+..-+....+++++.. +.++ . .-..++++.|..++..+|+.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~-~~~~~vitvP~~~~~~~r~~~~~ 174 (394)
T 3qfu_A 98 QKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--T-KVTHAVVTVPAYFNDAQRQATKD 174 (394)
T ss_dssp HHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--S-CCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--C-CcceEEEEECCCCCHHHHHHHHH
Confidence 1112333344444332 1222 2 34679999999999999988777
Q ss_pred HhhcccCCCeEEEecchhhhhccCCCc------eEEEEecCCCceEEEEee--cCeecc-cceEEeeccHHHHHHHHHHH
Q 017944 109 LMFETFNISGFYSSEQAVLSLYAVGRI------SGCTVDIGHGKIDIAPVI--EGAVQH-IASRRFEVGGMDLTKLLAQE 179 (363)
Q Consensus 109 ~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVDiG~~~t~v~pv~--dG~~~~-~~~~~~~~GG~~l~~~l~~~ 179 (363)
.+ +..|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++.... ......++||.++++.|.++
T Consensus 175 a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 175 AG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp HH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHH
Confidence 66 889999999999999999988643 349999999999998775 333221 12233689999999999888
Q ss_pred Hhcc-----CCCccccH-------HHHHHHHHHcccccCCHHHHHHhcccCCCceeEC---CCCcEEEEeceeccccccc
Q 017944 180 LGKT-----NPSVNLSL-------YDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTL---PDGQVIRIGKERYTVGEAL 244 (363)
Q Consensus 180 l~~~-----~~~~~~~~-------~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~l---p~~~~i~i~~~r~~~~E~l 244 (363)
+.++ +.+...+. +.++.+|+.+.... ...+.+ .++..+.+.-.|..+. -+
T Consensus 254 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~--------------~~~~~~~~~~~~~~~~~~i~r~~~~-~~ 318 (394)
T 3qfu_A 254 LIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQM--------------STRIEIDSFVDGIDLSETLTRAKFE-EL 318 (394)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCS--------------EEEEEEEEEETTEEEEEEEEHHHHH-HH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCC--------------cEEEEEEeccCCceeEEEEEHHHHH-HH
Confidence 7431 12211111 34555555443211 111222 1333333322222222 22
Q ss_pred cCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh-ccCCCCcceEEeCCCCCCCcCCc
Q 017944 245 FQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLT 323 (363)
Q Consensus 245 F~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~~~~~~i~v~~~~~~~~~~~~ 323 (363)
+.|. ...+.+.|.+.++++..+ ....++|+|+||+|++|++.++|++.+ .. .+....+ |
T Consensus 319 ~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-------~v~~~~~------p 378 (394)
T 3qfu_A 319 NLDL-----FKKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDGK-------KASKGIN------P 378 (394)
T ss_dssp HHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTTC-------CCBCCSC------T
T ss_pred HHHH-----HHHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCCC-------CCCCCcC------H
Confidence 2221 135667777777776543 344689999999999999999999998 32 2334445 7
Q ss_pred ceeeeechhhhhcc
Q 017944 324 LYSAWIGGAILAKV 337 (363)
Q Consensus 324 ~~~~w~Gasi~a~l 337 (363)
..++|.||+++|.+
T Consensus 379 ~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 379 DEAVAYGAAVQAGV 392 (394)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 79999999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.87 E-value=8e-22 Score=188.17 Aligned_cols=296 Identities=17% Similarity=0.149 Sum_probs=183.8
Q ss_pred CccEEEEcCCCcEEEeecCCCCCCce--------ecccceeeccCCCccccCcccccC----CceeccccCC--------
Q 017944 1 MEAAVVDAGSKLLKAGPAIPDQAPSM--------VIPSQMKRVLEDGSSSVDNSTLVE----DVTVDPVVRG-------- 60 (363)
Q Consensus 1 m~~vViD~Gs~~~k~G~~~ge~~P~~--------~~ps~~~~~~~~~~~g~~~~~~~~----~~~~~p~~~g-------- 60 (363)
|.+|.||+||.++++++. .+..|.. .+||++....++.++| +.|.... .-.++++++.
T Consensus 23 ~~viGID~GTt~s~va~~-~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG-~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVF-QHGKVEIIANDQGNRTTPSYVAFTDTERLIG-DAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp CCCEEEEECSSEEEEEEE-ETTEEEECCCTTSCSSEECCEEECSSCEEET-HHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred CCEEEEEcCCccEEEEEE-ECCeeEEEECCCCCcccceEEEECCCCEEec-HHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 567889999999999998 5544443 3588887655566777 5542111 0001222211
Q ss_pred -------------------------------eecCHHHHHHHHHHHHh---hccCCCCCCCceEEEEcCCCCCHHHHHHH
Q 017944 61 -------------------------------FIRDWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQL 106 (363)
Q Consensus 61 -------------------------------~i~~~~~~~~i~~~~~~---~~l~~~~~~~~~v~l~~~~~~~~~~r~~l 106 (363)
.+...+....+++++.. ..++. ....++++.|..++..+|+.+
T Consensus 101 ~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~~~~r~~~ 177 (404)
T 3i33_A 101 TVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGG---KVHSAVITVPAYFNDSQRQAT 177 (404)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSS---CCCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhcc---CCCcEEEEECCCCCHHHHHHH
Confidence 11112333444444432 12222 335799999999999999887
Q ss_pred HHHhhcccCCCeEEEecchhhhhccCCCc---------eEEEEecCCCceEEEEee--cCee-cccceEEeeccHHHHHH
Q 017944 107 VQLMFETFNISGFYSSEQAVLSLYAVGRI---------SGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGGMDLTK 174 (363)
Q Consensus 107 ~e~lfe~~~~~~v~~~~~~~~a~~~~g~~---------tglVVDiG~~~t~v~pv~--dG~~-~~~~~~~~~~GG~~l~~ 174 (363)
.+. ++..|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. +|.. +.......++||.++++
T Consensus 178 ~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 256 (404)
T 3i33_A 178 KDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 256 (404)
T ss_dssp HHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHH
T ss_pred HHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHH
Confidence 766 6889999999999999999988643 349999999999998874 4432 22223346899999999
Q ss_pred HHHHHHhcc-----CCCcccc-------HHHHHHHHHHcccccCCHHHHHHhcccCCCceeEC---CCCcEEEEeceecc
Q 017944 175 LLAQELGKT-----NPSVNLS-------LYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTL---PDGQVIRIGKERYT 239 (363)
Q Consensus 175 ~l~~~l~~~-----~~~~~~~-------~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~l---p~~~~i~i~~~r~~ 239 (363)
.|.+.+.++ +.....+ .+.+|++|+.++... ...+.+ .++..+.+.-.|..
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~--------------~~~~~~~~~~~g~~~~~~i~r~~ 322 (404)
T 3i33_A 257 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSST--------------QASIEIDSLYEGVDFYTSITRAR 322 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSS--------------EEEEEEEEEETTEEEEEEEEHHH
T ss_pred HHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCc--------------ceEEEEeeccCCceeEEEEcHHH
Confidence 998887431 2222111 135556665543211 111111 13333333222222
Q ss_pred ccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh-ccCCCCcceEEeCCCCCC
Q 017944 240 VGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYM 318 (363)
Q Consensus 240 ~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~~~~~~i~v~~~~~~~ 318 (363)
+.+ ++.|. ...+.+.|.+.++....+ ....++|+|+||+|++|++.++|++.+ .. .+....+
T Consensus 323 ~~~-~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-------~v~~~~~-- 385 (404)
T 3i33_A 323 FEE-LNADL-----FRGTLEPVEKALRDAKLD--KGQIQEIVLVGGSTRIPKIQKLLQDFFNGK-------ELNKSIN-- 385 (404)
T ss_dssp HHH-HTHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBCSSC--
T ss_pred HHH-HHHHH-----HHHHHHHHHHHHHHcCCC--HhhCCEEEEECCccccHHHHHHHHHHcCCC-------CCCCCcC--
Confidence 222 22221 134666777777665332 234588999999999999999999988 32 2334445
Q ss_pred CcCCcceeeeechhhhhcc
Q 017944 319 PENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 319 ~~~~~~~~~w~Gasi~a~l 337 (363)
|..+++.||+++|.+
T Consensus 386 ----p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 386 ----PDEAVAYGAAVQAAI 400 (404)
T ss_dssp ----TTTHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHH
Confidence 779999999999874
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.81 E-value=4.6e-19 Score=175.19 Aligned_cols=294 Identities=16% Similarity=0.154 Sum_probs=182.7
Q ss_pred ccEEEEcCCCcEEEeecCCCCCCce--------ecccceeeccCCCccccCcccccC-----C----ce-----------
Q 017944 2 EAAVVDAGSKLLKAGPAIPDQAPSM--------VIPSQMKRVLEDGSSSVDNSTLVE-----D----VT----------- 53 (363)
Q Consensus 2 ~~vViD~Gs~~~k~G~~~ge~~P~~--------~~ps~~~~~~~~~~~g~~~~~~~~-----~----~~----------- 53 (363)
.+|-||+||.++.+++. .+..|.. .+||+++...++..+| +.|.... + +.
T Consensus 5 ~~iGIDlGTt~s~va~~-~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG-~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVF-QHGKVEIIANDQGNRTTPSYVAFTDTERLIG-DAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp CCEEEEECSSEEEEEEE-CSSSEEECCCTTSCSEEECCEEECSSCEEET-HHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CEEEEEeCcccEEEEEE-ECCEEEEEECCCCCeecceEEEEcCCcEEEc-HHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 36779999999999998 5433433 3588888765566777 5542110 0 00
Q ss_pred ------ecccc----CCe-------------ecCHHHHHHHHHHHHh---hccCCCCCCCceEEEEcCCCCCHHHHHHHH
Q 017944 54 ------VDPVV----RGF-------------IRDWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLV 107 (363)
Q Consensus 54 ------~~p~~----~g~-------------i~~~~~~~~i~~~~~~---~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~ 107 (363)
.+|++ +|. ..-.+....+++++.. ..++. .-..++++.|..++..+|+.+.
T Consensus 83 v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~---~v~~~VitVPa~f~~~qr~a~~ 159 (554)
T 1yuw_A 83 VQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGK---TVTNAVVTVPAYFNDSQRQATK 159 (554)
T ss_dssp HHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSS---CCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHH
Confidence 01221 121 1112334444554432 22332 2356999999999999998777
Q ss_pred HHhhcccCCCeEEEecchhhhhccCCC-------ceEEEEecCCCceEEEEee--cCee-cccceEEeeccHHHHHHHHH
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAVGR-------ISGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGGMDLTKLLA 177 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~g~-------~tglVVDiG~~~t~v~pv~--dG~~-~~~~~~~~~~GG~~l~~~l~ 177 (363)
+ +++..|++.+.++++|.||++++|. .+.+|+|+|+++++++.+. +|.. +.......++||+++++.|.
T Consensus 160 ~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~ 238 (554)
T 1yuw_A 160 D-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMV 238 (554)
T ss_dssp H-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred H-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHH
Confidence 6 5578999999999999999998863 4679999999999999887 6754 22233446899999999998
Q ss_pred HHHhc-----cCCCcccc-------HHHHHHHHHHcccccCCHHHHHHhcccCCCceeECC---CCcEEEEeceeccccc
Q 017944 178 QELGK-----TNPSVNLS-------LYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLP---DGQVIRIGKERYTVGE 242 (363)
Q Consensus 178 ~~l~~-----~~~~~~~~-------~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp---~~~~i~i~~~r~~~~E 242 (363)
+++.+ .+.++..+ .+.+|.+|+.++.... ..+.++ +|....+.-.|-.+ |
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~--------------~~i~i~~~~~g~~~~~~ltr~~~-e 303 (554)
T 1yuw_A 239 NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQ--------------ASIEIDSLYEGIDFYTSITRARF-E 303 (554)
T ss_dssp HHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSE--------------EEEEETTCSSSCCEEEEEEHHHH-H
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCce--------------EEEEEeeccCCceEEEEEEHHHH-H
Confidence 87753 22222111 2456777777643211 122222 33322222222211 1
Q ss_pred cccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh-ccCCCCcceEEeCCCCCCCcC
Q 017944 243 ALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPEN 321 (363)
Q Consensus 243 ~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~~~~~~i~v~~~~~~~~~~ 321 (363)
-++.|- ...+.+.|.++++.... ...-.+.|+|+||+|++|++.++|++.+ .. .+....+
T Consensus 304 ~l~~~~-----~~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~f~~~-------~v~~~~n----- 364 (554)
T 1yuw_A 304 ELNADL-----FRGTLDPVEKALRDAKL--DKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK-------ELNKSIN----- 364 (554)
T ss_dssp HHTHHH-----HHHTTHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBCCSC-----
T ss_pred HHHHHH-----HHHHHHHHHHHHHHcCC--ChhhCcEEEEECCcccChHHHHHHHHHcCCC-------ccccCCC-----
Confidence 122221 02345566666665422 2233588999999999999999999988 22 2233344
Q ss_pred Ccceeeeechhhhhc
Q 017944 322 LTLYSAWIGGAILAK 336 (363)
Q Consensus 322 ~~~~~~w~Gasi~a~ 336 (363)
|..+++.||+++|.
T Consensus 365 -p~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 365 -PDEAVAYGAAVQAA 378 (554)
T ss_dssp -TTTHHHHHHHHHHH
T ss_pred -chhHHHHHHHHHHH
Confidence 77999999999986
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.79 E-value=1e-18 Score=174.43 Aligned_cols=296 Identities=17% Similarity=0.171 Sum_probs=183.7
Q ss_pred Cc-cEEEEcCCCcEEEeecCCCCCCcee--------cccceeec-cCCCccccCccccc-----CC------------c-
Q 017944 1 ME-AAVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRV-LEDGSSSVDNSTLV-----ED------------V- 52 (363)
Q Consensus 1 m~-~vViD~Gs~~~k~G~~~ge~~P~~~--------~ps~~~~~-~~~~~~g~~~~~~~-----~~------------~- 52 (363)
|. .|-||+||+++.+++. .+..|.++ +||+++.. .++..+| +.|... .+ +
T Consensus 1 m~~viGIDlGTt~s~va~~-~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG-~~A~~~~~~~p~~t~~~~Kr~iG~~~~ 78 (605)
T 2kho_A 1 MGKIIGIDLGTTNSCVAIM-DGTTPRVLENAEGDRTTPSIIAYTQDGETLVG-QPAKRQAVTNPQNTLFAIKRLIGRRFQ 78 (605)
T ss_dssp ---CEEEECCSSEEEEEEE-ETTEEEECCCTTSCSSEECEEEECTTSCEEES-HHHHTTTTTCGGGEEECGGGTTTCBSS
T ss_pred CCCEEEEEcCCcCEEEEEE-ECCEEEEEECCCCCcccceEEEEECCCcEEEC-HHHHHHhhhCCCCEeehhhHhhCCCCC
Confidence 54 4569999999999998 55445544 68888763 3445667 443111 00 0
Q ss_pred --------eecccc-------------CCe-ecCHHHHHHHHHHHHh---hccCCCCCCCceEEEEcCCCCCHHHHHHHH
Q 017944 53 --------TVDPVV-------------RGF-IRDWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLV 107 (363)
Q Consensus 53 --------~~~p~~-------------~g~-i~~~~~~~~i~~~~~~---~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~ 107 (363)
..+|++ +|. +...+....+++++.. ..++. .-..++++.|.+++..+|+.+.
T Consensus 79 d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~---~v~~~VitVPa~f~d~qr~a~~ 155 (605)
T 2kho_A 79 DEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATK 155 (605)
T ss_dssp STTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTTCCHHHHHHHH
T ss_pred cHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC---CCcEEEEEECCCCCHHHHHHHH
Confidence 012432 232 2222333444444432 22332 2356899999999999998777
Q ss_pred HHhhcccCCCeEEEecchhhhhccCCC------ceEEEEecCCCceEEEEeec------Cee-cccceEEeeccHHHHHH
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAVGR------ISGCTVDIGHGKIDIAPVIE------GAV-QHIASRRFEVGGMDLTK 174 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVDiG~~~t~v~pv~d------G~~-~~~~~~~~~~GG~~l~~ 174 (363)
+.+ +..|+..+.++++|.|||+++|. .+.+|+|+|+++++|+.+.- |.. +.......++||.++++
T Consensus 156 ~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 156 DAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 664 77899999999999999998864 24699999999999998863 433 12222345899999999
Q ss_pred HHHHHHhcc-----CCCcccc-------HHHHHHHHHHcccccCCHHHHHHhcccCCCceeECC------CC-cEEEEec
Q 017944 175 LLAQELGKT-----NPSVNLS-------LYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLP------DG-QVIRIGK 235 (363)
Q Consensus 175 ~l~~~l~~~-----~~~~~~~-------~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp------~~-~~i~i~~ 235 (363)
.|.+++.++ +.++..+ .+.+|++|+.++.... ..+.+| +| ..+.+.-
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~--------------~~i~l~~~~~~~~G~~~~~~~i 300 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ--------------TDVNLPYITADATGPKHMNIKV 300 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSE--------------EEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCc--------------eEEEecccccCCCCceEEEEEE
Confidence 998877542 3332111 2567777777653211 112222 23 2222222
Q ss_pred eeccccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCC
Q 017944 236 ERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPP 315 (363)
Q Consensus 236 ~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~ 315 (363)
.|-.+ |-++.|- ...+.+.|.+++..... ...-.+.|+|+||+|++|++.++|++.+.. .+....
T Consensus 301 tr~~f-e~l~~~~-----~~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~-------~~~~~~ 365 (605)
T 2kho_A 301 TRAKL-ESLVEDL-----VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK-------EPRKDV 365 (605)
T ss_dssp EHHHH-HTTCCST-----TGGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSS-------CCBCSS
T ss_pred eHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCC-------CcCcCC
Confidence 22222 2334332 13467777888877642 122357899999999999999999999821 123334
Q ss_pred CCCCcCCcceeeeechhhhhcc
Q 017944 316 EYMPENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 316 ~~~~~~~~~~~~w~Gasi~a~l 337 (363)
+ |..+++.||+++|..
T Consensus 366 n------pd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 366 N------PDEAVAIGAAVQGGV 381 (605)
T ss_dssp C------TTTHHHHHHHHHHTT
T ss_pred C------cchHHHHHHHHHHHH
Confidence 4 779999999999863
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.77 E-value=1e-17 Score=168.59 Aligned_cols=292 Identities=13% Similarity=0.122 Sum_probs=181.8
Q ss_pred CccEEEEcCCCcEEEeecCCCCCCcee--------cccceeeccCCCccccCcccc-----c--------C----Cc---
Q 017944 1 MEAAVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRVLEDGSSSVDNSTL-----V--------E----DV--- 52 (363)
Q Consensus 1 m~~vViD~Gs~~~k~G~~~ge~~P~~~--------~ps~~~~~~~~~~~g~~~~~~-----~--------~----~~--- 52 (363)
|..|-||+||.++.+++. ....|..+ +||+++...++..+| +.|.. + + .+
T Consensus 2 m~~iGIDlGTtns~va~~-~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG-~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 79 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVA-RNRGIDIVVNEVSNRSTPSVVGFGPKNRYLG-ETGKNKQTSNIKNTVANLKRIIGLDYHHP 79 (675)
T ss_dssp CCCEEEECCSSEEEEEEE-ETTEEEEECCTTSCSSEECCEEECSSSEEET-HHHHHHHTTCGGGEECCHHHHTTCBTTCT
T ss_pred CcEEEEEcCCCcEEEEEE-ECCeeEEEECCCCCcccceEEEECCCcEEec-HHHHHhhhhChHhHHHHHHHHhCCCCCcH
Confidence 667889999999999997 44344433 588887755556677 54411 0 0 00
Q ss_pred ------eecc-----ccCCee-------------cCHHHHHHHHHHHHh---hccCCCCCCCceEEEEcCCCCCHHHHHH
Q 017944 53 ------TVDP-----VVRGFI-------------RDWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQ 105 (363)
Q Consensus 53 ------~~~p-----~~~g~i-------------~~~~~~~~i~~~~~~---~~l~~~~~~~~~v~l~~~~~~~~~~r~~ 105 (363)
..+| ..+|.+ .-.+....+++++.. ..++. .-..++++.|.+++..+|+.
T Consensus 80 ~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~---~v~~~VITVPa~f~~~qR~a 156 (675)
T 3d2f_A 80 DFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKA---NITDVCIAVPPWYTEEQRYN 156 (675)
T ss_dssp THHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTTCCHHHHHH
T ss_pred HHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCC---CcceEEEEECCCCCHHHHHH
Confidence 0112 123432 112333444444322 12332 22569999999999999987
Q ss_pred HHHHhhcccCCCeEEEecchhhhhccCCC------------ceEEEEecCCCceEEEEee--cCee-cccceEEeeccHH
Q 017944 106 LVQLMFETFNISGFYSSEQAVLSLYAVGR------------ISGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGGM 170 (363)
Q Consensus 106 l~e~lfe~~~~~~v~~~~~~~~a~~~~g~------------~tglVVDiG~~~t~v~pv~--dG~~-~~~~~~~~~~GG~ 170 (363)
+.+.+ +..|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+. +|.. +.......++||+
T Consensus 157 ~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~ 235 (675)
T 3d2f_A 157 IADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGR 235 (675)
T ss_dssp HHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHH
Confidence 77654 77899999999999999987642 3579999999999999886 6654 3323334689999
Q ss_pred HHHHHHHHHHhc-----cCCCcccc-------HHHHHHHHHHcccccCCHHHHHHhcccCCCceeECC---CCc--EEEE
Q 017944 171 DLTKLLAQELGK-----TNPSVNLS-------LYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLP---DGQ--VIRI 233 (363)
Q Consensus 171 ~l~~~l~~~l~~-----~~~~~~~~-------~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp---~~~--~i~i 233 (363)
++++.|.+++.. .+.++..+ ...+|.+|+.++... ...+.++ +|. .+.+
T Consensus 236 d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------~~~i~i~~~~~g~~~~~~i 301 (675)
T 3d2f_A 236 DFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------NAPFSVESVMNDVDVSSQL 301 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS--------------EEEEEETTSSSSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC--------------ceEEEEeeeccCceEEEEE
Confidence 999999888752 22332111 256677777654221 0112222 222 2333
Q ss_pred eceec-cccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEe
Q 017944 234 GKERY-TVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLV 312 (363)
Q Consensus 234 ~~~r~-~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~ 312 (363)
..+.+ .+.+.++ ..+.+.|.+++...... ..-...|+|+||+|++|++.++|++.+. ..+.
T Consensus 302 tr~~fe~l~~~l~---------~~i~~~i~~~L~~a~l~--~~~I~~VvLvGGssriP~v~~~l~~~fg-------~~~~ 363 (675)
T 3d2f_A 302 SREELEELVKPLL---------ERVTEPVTKALAQAKLS--AEEVDFVEIIGGTTRIPTLKQSISEAFG-------KPLS 363 (675)
T ss_dssp EHHHHHHHTHHHH---------TTTTHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHHT-------SCEE
T ss_pred eHHHHHHHHHHHH---------HHHHHHHHHHHHHhCCC--hhhCcEEEEECCCccChHHHHHHHHhcC-------CCcc
Confidence 32221 1222223 23555666666554211 1124789999999999999999999881 1233
Q ss_pred CCCCCCCcCCcceeeeechhhhhc
Q 017944 313 KPPEYMPENLTLYSAWIGGAILAK 336 (363)
Q Consensus 313 ~~~~~~~~~~~~~~~w~Gasi~a~ 336 (363)
...+ |..+++.||+++|.
T Consensus 364 ~~~n------PdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 364 TTLN------QDEAIAKGAAFICA 381 (675)
T ss_dssp CCSC------TTTHHHHHHHHHHH
T ss_pred ccCC------cchHHHHHHHHHHH
Confidence 4444 77999999999886
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.77 E-value=1.5e-18 Score=165.78 Aligned_cols=236 Identities=14% Similarity=0.165 Sum_probs=147.7
Q ss_pred HHHHHHHHHHHhh---ccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCCCc-------
Q 017944 66 DAMEDLLHHVLYA---GLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRI------- 135 (363)
Q Consensus 66 ~~~~~i~~~~~~~---~l~~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~~------- 135 (363)
+....+++++... .++ . ....++++.|..++..+|+.+.+.+ +..|+..+.++++|.||+++++..
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~-~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~ 204 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--K-KVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISD 204 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--S-CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CC
T ss_pred HHHHHHHHHHHHHHHHHhC--C-CCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCC
Confidence 4445555555432 232 2 3457999999999999997766654 668999999999999999998754
Q ss_pred -eEEEEecCCCceEEEEe--ecCeec-ccceEEeeccHHHHHHHHHHHHhcc-----C--CCccccH-------HHHHHH
Q 017944 136 -SGCTVDIGHGKIDIAPV--IEGAVQ-HIASRRFEVGGMDLTKLLAQELGKT-----N--PSVNLSL-------YDVEKL 197 (363)
Q Consensus 136 -tglVVDiG~~~t~v~pv--~dG~~~-~~~~~~~~~GG~~l~~~l~~~l~~~-----~--~~~~~~~-------~~~~~i 197 (363)
+.+|+|+|+++|+++.+ .+|... .......++||.++++.|.+++..+ + .+...+. ..+|.+
T Consensus 205 ~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~ 284 (409)
T 4gni_A 205 KIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAEST 284 (409)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHH
Confidence 47999999999999986 333221 1122346899999999998887632 1 1111111 245556
Q ss_pred HHHcccccCCHHHHHHhcccCCCceeEC---CCCcEEEEeceeccccccccCCCCCCcccccHHHHHHHHHHcCChhHHH
Q 017944 198 KEQFSCCAEDELAYEKTQKSCEIEQHTL---PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHR 274 (363)
Q Consensus 198 K~~~~~v~~~~~~~~~~~~~~~~~~~~l---p~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~ 274 (363)
|+.+... ....+.+ .++....+.-.|..+.+ +++|. ...+.+.|.+.+++... ..
T Consensus 285 K~~ls~~--------------~~~~i~i~~~~~~~~~~~~itr~~~~~-~~~~~-----~~~i~~~i~~~l~~~~~--~~ 342 (409)
T 4gni_A 285 KRALSRS--------------TNASFSVESLIDGLDFASTINRLRYET-IARTV-----FEGFNRLVESAVKKAGL--DP 342 (409)
T ss_dssp HHHHHHS--------------SEEEEEEEEEETTEEEEEEEEHHHHHH-HTHHH-----HHHHHHHHHHHHHHTTC--CG
T ss_pred HHhCCCC--------------CceEEEeecccCCcceEEEeeHHHHHH-HHHHH-----HHHHHHHHHHHHHHcCC--CH
Confidence 6554211 1111222 12332222222222222 23221 13466666666666532 22
Q ss_pred HhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEe------CCCCCCCcCCcceeeeechhhhhccC
Q 017944 275 QLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLV------KPPEYMPENLTLYSAWIGGAILAKVV 338 (363)
Q Consensus 275 ~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~------~~~~~~~~~~~~~~~w~Gasi~a~l~ 338 (363)
...+.|+|+||+|++|++.++|++.+ ..++++. ...+ |..++-.||+++|...
T Consensus 343 ~~i~~V~LvGG~s~~p~v~~~l~~~f-----~~~~~v~~P~~~~~~~~------p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 343 LDVDEVIMSGGTSNTPRIAANFRYIF-----PESTRILAPSTDPSALN------PSELQARGAALQASLI 401 (409)
T ss_dssp GGCCEEEEESGGGGCHHHHHHHHHHS-----CTTSEEESTTTCTTCCC------TTTHHHHHHHHHHHHH
T ss_pred HHCCEEEEECCccccHHHHHHHHHHc-----CCccccccccccCCCcC------HHHHHHHHHHHHhhhh
Confidence 33588999999999999999999988 1133442 2333 7799999999998864
No 18
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.73 E-value=5.3e-17 Score=153.32 Aligned_cols=165 Identities=14% Similarity=0.181 Sum_probs=109.1
Q ss_pred hhcccCCCeEEEecchhhhhccCC------C-ceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhc
Q 017944 110 MFETFNISGFYSSEQAVLSLYAVG------R-ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGK 182 (363)
Q Consensus 110 lfe~~~~~~v~~~~~~~~a~~~~g------~-~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~ 182 (363)
+++..|++...+..+|+|++++++ . .+.+|||+|+++|+++.+.+|.++.. ...++||+++++.+.+.+.
T Consensus 159 ~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~~--~~~~~GG~~i~~~i~~~~~- 235 (377)
T 2ych_A 159 ALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAV--RVLTLSGKDFTEAIARSFN- 235 (377)
T ss_dssp HHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEEE--EEESCSHHHHHHHHHHHTT-
T ss_pred HHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEEE--EeeechHHHHHHHHHHHhC-
Confidence 447889999999999999999874 2 34699999999999999999998754 5689999999999988654
Q ss_pred cCCCccccHHHHHHHHHHcccccCCHHHHHHhcccCCCceeECCCCcEEEEeceeccccccccCCCCCCcccccHHHHHH
Q 017944 183 TNPSVNLSLYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLV 262 (363)
Q Consensus 183 ~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~ 262 (363)
.+.+.+|++|++++++..+..+. ...+.+++ ..+.++.+ .+.|++ +| ....+.+.|.
T Consensus 236 ------~~~~~aE~~K~~~~~~~~~~~~~--------~~~i~~~~-~~~~i~~~--~~~~~i-~~-----~~~~i~~~i~ 292 (377)
T 2ych_A 236 ------LDLLAAEEVKRTYGMATLPTEDE--------ELLLDFDA-ERERYSPG--RIYDAI-RP-----VLVELTQELR 292 (377)
T ss_dssp ------CCHHHHHHHHHHTC------------------------------------CHHHHH-HH-----HHHHHHHHHH
T ss_pred ------CCHHHHHHHHhhccccccccccc--------cccccccc-ccccCCHH--HHHHHH-HH-----HHHHHHHHHH
Confidence 57889999999998765431110 00122322 22222211 111111 11 1134666677
Q ss_pred HHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh
Q 017944 263 HTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA 300 (363)
Q Consensus 263 ~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL 300 (363)
+++..++...+....++|+|+||+|++||+.++|++.+
T Consensus 293 ~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l 330 (377)
T 2ych_A 293 RSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL 330 (377)
T ss_dssp HHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH
T ss_pred HHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh
Confidence 77766554555667789999999999999999999999
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.71 E-value=9.6e-18 Score=156.33 Aligned_cols=170 Identities=18% Similarity=0.171 Sum_probs=125.2
Q ss_pred CccEEEEcCCCcEEEeecCCCCCCceecccceeeccC------------------------CCccccCcccccCCceecc
Q 017944 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLE------------------------DGSSSVDNSTLVEDVTVDP 56 (363)
Q Consensus 1 m~~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~~------------------------~~~~g~~~~~~~~~~~~~p 56 (363)
|-.|.||+|+.++|+... + .-.+.+||.++...+ .+.+| ++| .+|
T Consensus 21 m~~igiDlG~~~tkv~~~--~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG-~~A-------~~~ 89 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIGV--D-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASG-NNI-------RVP 89 (346)
T ss_dssp CEEEEEEECSSEEEEECG--G-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCS-SCC-------BCC
T ss_pred eEEEEEecCCcceeEEec--C-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEc-cce-------ecc
Confidence 556789999999999653 3 346789999875322 12345 443 379
Q ss_pred ccCCeecCHHHHHHHHHHHHhhccCCCCCCCceEE--EEcCCCCCHHHHHHHHHHhhcc-------------cCCCeEEE
Q 017944 57 VVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQIL--FTDPLCSPKAVREQLVQLMFET-------------FNISGFYS 121 (363)
Q Consensus 57 ~~~g~i~~~~~~~~i~~~~~~~~l~~~~~~~~~v~--l~~~~~~~~~~r~~l~e~lfe~-------------~~~~~v~~ 121 (363)
++++.+.+ +..+.++.+.+.+...........++ ++.|......+|+.+.+.+... +++..+.+
T Consensus 90 l~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~l 168 (346)
T 2fsj_A 90 QGDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIM 168 (346)
T ss_dssp SSTTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEE
T ss_pred cCCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEE
Confidence 99999998 77888888888654311111345688 9999988888888888775442 23577999
Q ss_pred ecchhhhhccC--C-----C-ceEEEEecCCCceEEEEee--cCeecccceEEeeccHHHHHHHHHHHHhc
Q 017944 122 SEQAVLSLYAV--G-----R-ISGCTVDIGHGKIDIAPVI--EGAVQHIASRRFEVGGMDLTKLLAQELGK 182 (363)
Q Consensus 122 ~~~~~~a~~~~--g-----~-~tglVVDiG~~~t~v~pv~--dG~~~~~~~~~~~~GG~~l~~~l~~~l~~ 182 (363)
+++|.+|++++ + . .+.+|||+|+++|+++.+. +|.++.......++||+++++.+.+.+++
T Consensus 169 i~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 169 RPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAK 239 (346)
T ss_dssp EETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHH
Confidence 99999999984 2 1 3459999999999999999 88776654577899999999998877764
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.70 E-value=2.8e-16 Score=156.81 Aligned_cols=295 Identities=16% Similarity=0.140 Sum_probs=171.8
Q ss_pred Ccc-EEEEcCCCcEEEeecCCCCCCce--------ecccceeecc-CCCccccCcccccC-----C----ce--------
Q 017944 1 MEA-AVVDAGSKLLKAGPAIPDQAPSM--------VIPSQMKRVL-EDGSSSVDNSTLVE-----D----VT-------- 53 (363)
Q Consensus 1 m~~-vViD~Gs~~~k~G~~~ge~~P~~--------~~ps~~~~~~-~~~~~g~~~~~~~~-----~----~~-------- 53 (363)
|.. |-||+||+++.+++. ....|.. .+||+++... ++..+| +.|.... + +.
T Consensus 1 M~~viGIDlGTT~S~Va~~-~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG-~~A~~~~~~~p~~ti~~~KrllG~~~~ 78 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIM-DGTTPRVLENAEGDRTTPSIIAYTQDGCTLVG-QPAKRQAVTNPQNTLFAIKRLIGRRFQ 78 (605)
T ss_dssp -CCEEEEECCSSEEEEEEE-ETTEEEECCCTTSCSSEECCEEECTTSCEEES-HHHHHTTTTCGGGEECCGGGTTTCBTT
T ss_pred CCcEEEEEcCCCcEEEEEE-ECCEEEEEECCCCCcccceEEEEeCCCcEEec-HHHHHHHHhCCCcEehhhHHhhCCCCC
Confidence 664 559999999999997 4434433 3588887743 356677 4431110 0 00
Q ss_pred ---------eccc-----cC--------Ce-ecCHHHHHHHHHHHHh---hccCCCCCCCceEEEEcCCCCCHHHHHHHH
Q 017944 54 ---------VDPV-----VR--------GF-IRDWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLV 107 (363)
Q Consensus 54 ---------~~p~-----~~--------g~-i~~~~~~~~i~~~~~~---~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~ 107 (363)
.+|+ .+ |. ....+....+++++.. ..++. .-..++++.|..++..+|+.+.
T Consensus 79 d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~---~v~~~VITVPa~f~~~qr~a~~ 155 (605)
T 4b9q_A 79 DEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATK 155 (605)
T ss_dssp SHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHH
T ss_pred CHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHH
Confidence 1121 11 11 2223344445554432 23332 2356899999999999997665
Q ss_pred HHhhcccCCCeEEEecchhhhhccCCC------ceEEEEecCCCceEEEEeecCe----e---cccceEEeeccHHHHHH
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAVGR------ISGCTVDIGHGKIDIAPVIEGA----V---QHIASRRFEVGGMDLTK 174 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVDiG~~~t~v~pv~dG~----~---~~~~~~~~~~GG~~l~~ 174 (363)
+. .+..|++.+.++++|.|||+++|. .+-+|+|+|+++++++.+.-+. . +........+||.++++
T Consensus 156 ~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~ 234 (605)
T 4b9q_A 156 DA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHH
T ss_pred HH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHH
Confidence 55 577899999999999999998863 3569999999999999886443 1 11122235789999999
Q ss_pred HHHHHHhc-----cCCCcccc-------HHHHHHHHHHcccccCCHHHHHHhcccCCCceeECC-------CCcEEEEec
Q 017944 175 LLAQELGK-----TNPSVNLS-------LYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLP-------DGQVIRIGK 235 (363)
Q Consensus 175 ~l~~~l~~-----~~~~~~~~-------~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp-------~~~~i~i~~ 235 (363)
.|.+++.. .+.+...+ ...+|.+|+.++.... ..+.+| ++..+.+.-
T Consensus 235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~--------------~~i~~~~~~~~~~g~~~~~~~i 300 (605)
T 4b9q_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ--------------TDVNLPYITADATGPKHMNIKV 300 (605)
T ss_dssp HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSE--------------EEEEEEEEEECSSSEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCC--------------eEEEEeeeccCCCCCeeEEEEE
Confidence 99887763 22222222 3355666665432211 111111 112222222
Q ss_pred eeccccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCC
Q 017944 236 ERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPP 315 (363)
Q Consensus 236 ~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~ 315 (363)
.|-.+.+ ++.|- ...+.+.|.+++..... ...-.+.|+|+||+|++|++.++|++.+.. .+....
T Consensus 301 tr~~~e~-l~~~~-----~~~i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~~fg~-------~~~~~~ 365 (605)
T 4b9q_A 301 TRAKLES-LVEDL-----VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK-------EPRKDV 365 (605)
T ss_dssp EHHHHHH-HHHHH-----HHHTTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHHHHHTS-------CCCSSS
T ss_pred eHHHHHH-HHHHH-----HHHHHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHHHHhcc-------CcCCCc
Confidence 2222211 11110 02234444455544322 112246899999999999999999998821 122233
Q ss_pred CCCCcCCcceeeeechhhhhc
Q 017944 316 EYMPENLTLYSAWIGGAILAK 336 (363)
Q Consensus 316 ~~~~~~~~~~~~w~Gasi~a~ 336 (363)
+ |..++-.||++.|.
T Consensus 366 n------PdeaVA~GAai~a~ 380 (605)
T 4b9q_A 366 N------PDEAVAIGAAVQGG 380 (605)
T ss_dssp C------TTTHHHHHHHHHHH
T ss_pred C------hhHHHHHhHHHHHH
Confidence 3 66888999999886
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.48 E-value=1.1e-13 Score=131.88 Aligned_cols=205 Identities=15% Similarity=0.092 Sum_probs=132.8
Q ss_pred HHHHHHHHHHhhcccCCCeEEEecchhhhhccCCC-----ceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHH
Q 017944 100 KAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGR-----ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTK 174 (363)
Q Consensus 100 ~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~ 174 (363)
+...+.+.+. ++..|..-..++.+|+|+++++.. .+.+|||+|+++|+++.+.+|.++.. ..+++||+++|+
T Consensus 167 ~~~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~ 243 (419)
T 4a2a_A 167 LKVYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIK 243 (419)
T ss_dssp HHHHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHH
Confidence 3444444444 477899999999999999998764 35799999999999999999999865 568999999999
Q ss_pred HHHHHHhccCCCccccHHHHHHHHHHcccccCCHHHHHHhcccCCCceeECCC--C-cEEEEec-eeccccccccCCCCC
Q 017944 175 LLAQELGKTNPSVNLSLYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHTLPD--G-QVIRIGK-ERYTVGEALFQPSIL 250 (363)
Q Consensus 175 ~l~~~l~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~lp~--~-~~i~i~~-~r~~~~E~lF~p~~~ 250 (363)
.+.+.+. .+.+.+|++|.+++.+..+. + +...+++|. + ....++. +...+.+.++
T Consensus 244 dIa~~l~-------~~~~~AE~iK~~~g~a~~~~-~--------~~~~i~v~~~~~~~~~~is~~~l~~ii~p~v----- 302 (419)
T 4a2a_A 244 DVSAVLD-------TSFEESERLIITHGNAVYND-L--------KEEEIQYRGLDGNTIKTTTAKKLSVIIHARL----- 302 (419)
T ss_dssp HHHHHHT-------CCHHHHHHHHHHHCCSCCTT-C--------CCCEEEEECTTSCSEEEEEHHHHHHHHHHHH-----
T ss_pred HHHHHHC-------CCHHHHHHHHHHhccCcccC-C--------CCceEEEeecCCccceEEcHHHHHHHHHHHH-----
Confidence 9999876 78899999999987654321 0 011222221 1 1222221 1111112211
Q ss_pred CcccccHHHHHHHHHHcCCh---hH-HHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeC----CCCCCC---
Q 017944 251 GLEAHGIVEQLVHTISTVSS---EN-HRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVK----PPEYMP--- 319 (363)
Q Consensus 251 ~~~~~~l~~~I~~~i~~~~~---~~-r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~----~~~~~~--- 319 (363)
..+.+.|.+.++.... +. ...+.+.|+||||+|++||+.+.+++.+ +.++++.. .|..+.
T Consensus 303 ----eei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-----g~~vri~~~~~~~p~~~~~~~ 373 (419)
T 4a2a_A 303 ----REIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-----KSPVRTGCYANSDRPSIINAD 373 (419)
T ss_dssp ----HHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-----TSCEEECCGGGSSSCCCBTCH
T ss_pred ----HHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-----CCCeEEEecCCCCchhccCcc
Confidence 3455666666666532 22 3456788999999999999999999999 22444433 021111
Q ss_pred --cCCcceeeeechhhhhcc
Q 017944 320 --ENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 320 --~~~~~~~~w~Gasi~a~l 337 (363)
...|.|++-+|-.+++..
T Consensus 374 ~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 374 EVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp HHHTCGGGHHHHHTTCC---
T ss_pred cccCCchHHHHHHHHHHHhh
Confidence 012778888888777654
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.46 E-value=3.7e-13 Score=124.06 Aligned_cols=178 Identities=15% Similarity=0.145 Sum_probs=109.6
Q ss_pred cccCCCeEEEecchhhhhccCC-----CceEEEEecCCCceEEEEeecCee-cccceEEeeccHHHHHHHHHHHHhccCC
Q 017944 112 ETFNISGFYSSEQAVLSLYAVG-----RISGCTVDIGHGKIDIAPVIEGAV-QHIASRRFEVGGMDLTKLLAQELGKTNP 185 (363)
Q Consensus 112 e~~~~~~v~~~~~~~~a~~~~g-----~~tglVVDiG~~~t~v~pv~dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~ 185 (363)
+.+++..+.++++|++|+++.+ ..+.+|||+|+++|+++.+.+|.+ +.......++||.++++.+.+.+.++
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-- 213 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLA-- 213 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCC--
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHc--
Confidence 4456788999999999998763 356799999999999999999876 44344567999999999999999865
Q ss_pred CccccHHHHHHH-HHHcccccCCHHHHHHhcccCCCceeECCCCcEEEEeceeccccccccCCCCCCcccccHHHHHHHH
Q 017944 186 SVNLSLYDVEKL-KEQFSCCAEDELAYEKTQKSCEIEQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHT 264 (363)
Q Consensus 186 ~~~~~~~~~~~i-K~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~ 264 (363)
...++.+.++++ |.+...... .+ ...+|.. .....+. +.+ ....+.+.|.+.
T Consensus 214 ~~~i~~~~ae~~lk~~~~~~~~--~~-----------~i~~~~~--------~~~~~~~-i~~-----~~~~~~~~i~~~ 266 (320)
T 2zgy_A 214 RTKGSSYLADDIIIHRKDNNYL--KQ-----------RINDENK--------ISIVTEA-MNE-----ALRKLEQRVLNT 266 (320)
T ss_dssp SBGGGHHHHHHHHHTTTCHHHH--HH-----------HSSSSCT--------HHHHHHH-HHH-----HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhhhhcc--cc-----------eecCchh--------hHHHHHH-HHH-----HHHHHHHHHHHH
Confidence 444667778877 654210000 00 0001110 0000000 000 001233333333
Q ss_pred HHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhc
Q 017944 265 ISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 336 (363)
Q Consensus 265 i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~ 336 (363)
+++. .-...|+|+||+|.+ +.+.|++.+... .- ++...++ |.++.-+|+.++++
T Consensus 267 i~~~------~~~~~vvl~GGga~l--l~~~l~~~~~~~--~~--~~~~~~~------P~~a~A~G~~~~~~ 320 (320)
T 2zgy_A 267 LNEF------SGYTHVMVIGGGAEL--ICDAVKKHTQIR--DE--RFFKTNN------SQYDLVNGMYLIGN 320 (320)
T ss_dssp HTTC------CCCCEEEEESTTHHH--HHHHHHHTSCCC--GG--GEECCSC------GGGHHHHHHHHHHC
T ss_pred HHhh------cCCCeEEEECChHHH--HHHHHHHHhCCC--CC--ceeeCCC------cHHHHHHHHHHhcC
Confidence 3332 123679999999998 777777666110 00 2333445 78999999998763
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.40 E-value=5.8e-13 Score=123.07 Aligned_cols=273 Identities=12% Similarity=0.097 Sum_probs=156.9
Q ss_pred EEEEcCCCcEEEeec-CC---CCCCceecccceeecc-----------------CCCccccCcccccCCceeccccCCee
Q 017944 4 AVVDAGSKLLKAGPA-IP---DQAPSMVIPSQMKRVL-----------------EDGSSSVDNSTLVEDVTVDPVVRGFI 62 (363)
Q Consensus 4 vViD~Gs~~~k~G~~-~g---e~~P~~~~ps~~~~~~-----------------~~~~~g~~~~~~~~~~~~~p~~~g~i 62 (363)
|-||+|-+++|+-.. .+ +..-+..|||.++... +.+.+| +.+.. +-.....
T Consensus 10 igiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG-~~a~~------~~~~~~k- 81 (329)
T 4apw_A 10 MTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIG-EQGVE------DSSETSK- 81 (329)
T ss_dssp EEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEES-CCSSS------CSGGGCC-
T ss_pred EEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeC-ccccc------ccccCCc-
Confidence 459999999999653 02 1124577899875421 113345 43211 1111122
Q ss_pred cCHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCCCCH--HHHHHHHHHhhcc-------------cCCCeEEEecchhh
Q 017944 63 RDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPK--AVREQLVQLMFET-------------FNISGFYSSEQAVL 127 (363)
Q Consensus 63 ~~~~~~~~i~~~~~~~~l~~~~~~~~~v~l~~~~~~~~--~~r~~l~e~lfe~-------------~~~~~v~~~~~~~~ 127 (363)
+-+...-++..++.+.+......+..+++..|..... ++|+++.+.+... +.+..+.+.++++.
T Consensus 82 -~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~g 160 (329)
T 4apw_A 82 -TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSG 160 (329)
T ss_dssp -CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHH
T ss_pred -CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHH
Confidence 2234444555665443432210233466666654332 3456666655421 23467999999999
Q ss_pred hhccCC----CceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCccccHHHHHHHHHHccc
Q 017944 128 SLYAVG----RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLKEQFSC 203 (363)
Q Consensus 128 a~~~~g----~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~iK~~~~~ 203 (363)
+++... ..+.+|||+|+++|+++.+.+|.++......+++||.++++.+.+.+++..++..++...++++|+. +.
T Consensus 161 a~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~~~~~e~i~~~-g~ 239 (329)
T 4apw_A 161 VLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTDLNNGNLITNEQAESALNN-GY 239 (329)
T ss_dssp HHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTTSBTTTTCSSS-CS
T ss_pred HHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHhc-CC
Confidence 998762 3567999999999999999999998766667899999999999998885233333444455555443 21
Q ss_pred ccCCHHHHHHhcccCCCceeECCCCcEEEEeceeccccccccCCCCCCcccccHHHHHHHHHHc--CChhHHHHhhcCeE
Q 017944 204 CAEDELAYEKTQKSCEIEQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTIST--VSSENHRQLLENTV 281 (363)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~~~lp~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~--~~~~~r~~l~~nIv 281 (363)
+... -.+++ +. .-.+.+. ...+.+.|.+.+.+ +|++ +...|+
T Consensus 240 ~~~g---------------~~~~~-----~~--~~~i~~~----------~~e~~~~I~~~i~~~~~~~~----~~~~Iv 283 (329)
T 4apw_A 240 MKKG---------------GEIDT-----ES--STVIKKV----------KEKFLKDAIKLIEKRGFKLD----QLDSLI 283 (329)
T ss_dssp SCEE---------------CTTCC-----ST--THHHHHH----------HHHHHHHHHHHHHHHTCCTT----SCSEEE
T ss_pred cccC---------------Ccchh-----HH--HHHHHHH----------HHHHHHHHHHHHHHcCCCHH----HccEEE
Confidence 1000 00000 00 0000000 01233334444433 3333 357899
Q ss_pred EccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhcc
Q 017944 282 LCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 282 l~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l 337 (363)
||||+|.+ +.+.|++++. .++. ..++ |.++...|+-.++..
T Consensus 284 ltGGGA~l--~~~~l~~~~~-----~~v~--v~~~------P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 284 FIGGTTQK--LKEQISKTYP-----NNSI--ITNN------SQWTTCEGLYKVAVA 324 (329)
T ss_dssp EESTTHHH--HHHHHHHHST-----TCEE--CCSS------GGGHHHHHHHHHHHH
T ss_pred EECChHHH--HHHHHHHHcC-----CCCE--ecCC------ChhhHHHHHHHHHhh
Confidence 99999999 4577777761 1233 3444 779999998887653
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.34 E-value=1.6e-12 Score=121.19 Aligned_cols=198 Identities=15% Similarity=0.188 Sum_probs=119.5
Q ss_pred ceEEEEcCCCCCHHHH-HHHHHHhhcc-----------cCCCeEEEecchhhhhccCC-----------CceEEEEecCC
Q 017944 88 GQILFTDPLCSPKAVR-EQLVQLMFET-----------FNISGFYSSEQAVLSLYAVG-----------RISGCTVDIGH 144 (363)
Q Consensus 88 ~~v~l~~~~~~~~~~r-~~l~e~lfe~-----------~~~~~v~~~~~~~~a~~~~g-----------~~tglVVDiG~ 144 (363)
-.+++..|.-....+| +++.+.+... +.+..|.++++|++|+++.+ ..+.+|||+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 4577777876655555 4677766532 23478999999999999875 34569999999
Q ss_pred CceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCccccHHHHHHHHHHcccccCCHHHHHHhcccCCCceeE
Q 017944 145 GKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLKEQFSCCAEDELAYEKTQKSCEIEQHT 224 (363)
Q Consensus 145 ~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~iK~~~~~v~~~~~~~~~~~~~~~~~~~~ 224 (363)
++|+++.+.+|.++......+++||..+++.+.+.++++.....++.+ .++...-|. .+.
T Consensus 194 gTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~~~g~~l~~~---~i~~g~~~~-----------------~~~ 253 (355)
T 3js6_A 194 GTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKKSEGASITPR---MIEKGLEYK-----------------QCK 253 (355)
T ss_dssp SCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--------CHH---HHHSCCC----------------------
T ss_pred CcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHhcCCCcCCHH---HHhcCCccc-----------------ccc
Confidence 999999999999988777789999999999999999875322223332 222111000 000
Q ss_pred CCCCcEEEEeceeccccccccCCCCCCcccccHHHHHHHHHHcCChhHHHHhhcCeEEccCcccccc--hHHHHHhhhcc
Q 017944 225 LPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTG--FEDRFQKEAGL 302 (363)
Q Consensus 225 lp~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G--~~~rL~~eL~~ 302 (363)
.+.++.+++......+. ..+.+.|.+.+.+.=.+ .+...+|+|+||+|.+++ +.+.|++++
T Consensus 254 ~~~~k~~di~~~i~~a~-------------~~~~~~I~~~i~~~l~~--~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~-- 316 (355)
T 3js6_A 254 LNQKTVIDFKDEFYKEQ-------------DSLIEEVMSNFEITVGN--INSIDRIIVTGGGANIHFDSLSHYYSDVF-- 316 (355)
T ss_dssp --------CHHHHHHHH-------------HHHHHHHHHHHHHHTCC--TTSCSEEEEESTTHHHHHHHHHHHSSSCE--
T ss_pred ccccccccHHHHHHHHH-------------HHHHHHHHHHHHHHhhc--hhhccEEEEECcchhcchhhHHHHHHHHC--
Confidence 01112222221111111 12333333333332111 234578999999999998 777777665
Q ss_pred CCCCcceEEeCCCCCCCcCCcceeeeechhhhhcc
Q 017944 303 CSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 303 ~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l 337 (363)
|. . ++ |.++.-.|..+++..
T Consensus 317 -~~------~--~~------p~~anA~G~~~~~~~ 336 (355)
T 3js6_A 317 -EK------A--DD------SQFSNVRGYEKLGEL 336 (355)
T ss_dssp -EC------C--SS------GGGHHHHHHHHHHHH
T ss_pred -CC------C--CC------cHHHHHHHHHHHHHH
Confidence 11 1 44 789999999998764
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.73 E-value=6.4e-08 Score=92.09 Aligned_cols=74 Identities=20% Similarity=0.255 Sum_probs=62.0
Q ss_pred cchhhhhccCC----C-ceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCcccc-HHHHHH
Q 017944 123 EQAVLSLYAVG----R-ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS-LYDVEK 196 (363)
Q Consensus 123 ~~~~~a~~~~g----~-~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~-~~~~~~ 196 (363)
-+|+||.++.= + ...++||+|+++|+++.+.+|..+.. ..++.||+++|+.+..-|. .+ .+.+|+
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a--~~ip~gG~~VT~DIA~~Lg-------t~d~~~AEr 460 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIA--THLAGAGDMVTMIIARELG-------LEDRYLAEE 460 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEE--EEEECSHHHHHHHHHHHHT-------CCCHHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhC-------CCCHHHHHH
Confidence 57777777652 2 45699999999999999999999865 5689999999999999998 55 899999
Q ss_pred HHHHcccccC
Q 017944 197 LKEQFSCCAE 206 (363)
Q Consensus 197 iK~~~~~v~~ 206 (363)
||. |+.+..
T Consensus 461 IK~-YG~A~v 469 (610)
T 2d0o_A 461 IKK-YPLAKV 469 (610)
T ss_dssp HHH-SCEEEE
T ss_pred hcc-cCceee
Confidence 999 876643
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.66 E-value=7e-08 Score=92.09 Aligned_cols=74 Identities=22% Similarity=0.228 Sum_probs=61.7
Q ss_pred cchhhhhccCC----C-ceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHHHHHHHHHhccCCCcccc-HHHHHH
Q 017944 123 EQAVLSLYAVG----R-ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS-LYDVEK 196 (363)
Q Consensus 123 ~~~~~a~~~~g----~-~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~-~~~~~~ 196 (363)
-+|+||.++.= + ...++||+|+++|+++.+.+|..+.. ..++.||+++|+.+..-|. .+ .+.+|+
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a--~~ip~gG~~VT~DIA~~Lg-------~~d~~~AEr 462 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITA--VHLAGAGNMVSLLIKTELG-------LEDLSLAEA 462 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEE--EEEECCHHHHHHHHHHHHT-------CSCHHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhC-------CCCHHHHHH
Confidence 56777776652 2 45689999999999999999999865 5689999999999999998 55 899999
Q ss_pred HHHHcccccC
Q 017944 197 LKEQFSCCAE 206 (363)
Q Consensus 197 iK~~~~~v~~ 206 (363)
||. |+.+..
T Consensus 463 IK~-YG~A~~ 471 (607)
T 1nbw_A 463 IKK-YPLAKV 471 (607)
T ss_dssp HHH-SCEEEE
T ss_pred hcc-cCceee
Confidence 999 876643
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.19 E-value=3.7e-06 Score=75.28 Aligned_cols=168 Identities=13% Similarity=0.189 Sum_probs=92.5
Q ss_pred eEEEecchhhhhccCC---CceEEEEecCCCceEEEEe-ecCeeccc-ceEEeeccHHHHHHHHHHHHhccCCCccccHH
Q 017944 118 GFYSSEQAVLSLYAVG---RISGCTVDIGHGKIDIAPV-IEGAVQHI-ASRRFEVGGMDLTKLLAQELGKTNPSVNLSLY 192 (363)
Q Consensus 118 ~v~~~~~~~~a~~~~g---~~tglVVDiG~~~t~v~pv-~dG~~~~~-~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~ 192 (363)
.+..++++.+.+++.. .....|+|+|.+.++++-+ .+|..... .-.....|+.++.+.+.+.|.. +..
T Consensus 73 ~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~-------~~~ 145 (276)
T 4ehu_A 73 ADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIEV-------DVS 145 (276)
T ss_dssp CSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHHTC-------CGG
T ss_pred CCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHhcc-------Chh
Confidence 3567888888887764 3456899999999998877 44543211 1123456777777777777652 111
Q ss_pred HHHHHHHHc---ccccC-C----HHHHHHhcccCCCceeECCCCcEEEEeceeccccccccCCCCCCcccccHHHHHHHH
Q 017944 193 DVEKLKEQF---SCCAE-D----ELAYEKTQKSCEIEQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHT 264 (363)
Q Consensus 193 ~~~~iK~~~---~~v~~-~----~~~~~~~~~~~~~~~~~lp~~~~i~i~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~ 264 (363)
-...+.... .-++. + ..++..... .+. ...+ -..++.+.|.+.
T Consensus 146 ~~~~~~~~a~~~~~i~~~~~~f~~s~~~~~~~----------~~~---------~~~d----------i~a~~~~~v~~~ 196 (276)
T 4ehu_A 146 ELGSISMNSQNEVSISSTCTVFAESEVISHLS----------ENA---------KIED----------IVAGIHTSVAKR 196 (276)
T ss_dssp GHHHHHTTCSSCCCCCCCSHHHHHHHHHHHHH----------TTC---------CHHH----------HHHHHHHHHHHH
T ss_pred hhHHHHhcCCCCCCcCCccchhhhhHHHHhhh----------ccc---------cHHH----------HHHHHHHHHHHH
Confidence 122221110 00000 0 000000000 000 0000 012334444443
Q ss_pred HHcCChhHHHHhhcCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhc
Q 017944 265 ISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 336 (363)
Q Consensus 265 i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~ 336 (363)
+... -.+....+.|+++||.|..|+++++|++.+ ..+++.+++ |.+.+-+||+++|.
T Consensus 197 l~~~--~~~~~~~~~vvl~GGva~n~~lr~~l~~~~-------g~~~~~p~~------p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 197 VSSL--VKRIGVQRNVVMVGGVARNSGIVRAMAREI-------NTEIIVPDI------PQLTGALGAALYAF 253 (276)
T ss_dssp HHHH--HHHHCCCSSEEEESGGGGCHHHHHHHHHHH-------TSCEECCSS------GGGHHHHHHHHHHH
T ss_pred HHHH--HHhcccCCeEEEecCccchHHHHHHHHHHH-------CCCeeeCCC------cchHHHHHHHHHHH
Confidence 3221 223344578999999999999999999888 334555565 77888899999984
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.51 E-value=0.00011 Score=65.35 Aligned_cols=47 Identities=19% Similarity=0.358 Sum_probs=37.2
Q ss_pred cCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhcc
Q 017944 278 ENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 278 ~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l 337 (363)
+.|+++||.++.|++.+.+.+.| ...+..++. +.+..-+||+++|..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~l-------g~~v~~p~~------~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGL-------GVEIKTSPL------AQYNGALGAALYAYK 256 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHH-------CSCEECCGG------GGGHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHH-------CCCeEeCCC------cchHhHHHHHHHHHH
Confidence 67999999999999999999999 222444444 567788999999864
No 29
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.00 E-value=0.0014 Score=59.54 Aligned_cols=73 Identities=14% Similarity=0.146 Sum_probs=51.8
Q ss_pred HHHHHHHHHhhcccCCCeEEEecch---hhhhc----cCC-CceEEEEecCCCceEEEEeecCeecccceEEeeccHHHH
Q 017944 101 AVREQLVQLMFETFNISGFYSSEQA---VLSLY----AVG-RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDL 172 (363)
Q Consensus 101 ~~r~~l~e~lfe~~~~~~v~~~~~~---~~a~~----~~g-~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l 172 (363)
.+++.+.+.+-+.+|++ +.+++.. .++.+ +.+ ..+++|||+|+++|.++-+.+|.+.. ...+|+|+-.+
T Consensus 97 ~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v~l 173 (315)
T 1t6c_A 97 KNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIVNL 173 (315)
T ss_dssp TTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEEE--EEEECCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCceee--EEEEeccHHHH
Confidence 44556777776777874 4555432 22221 223 56799999999999999999998864 36789999988
Q ss_pred HHHH
Q 017944 173 TKLL 176 (363)
Q Consensus 173 ~~~l 176 (363)
++.+
T Consensus 174 ~e~~ 177 (315)
T 1t6c_A 174 TETF 177 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 30
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.74 E-value=0.0022 Score=58.25 Aligned_cols=72 Identities=19% Similarity=0.300 Sum_probs=49.0
Q ss_pred HHHHHHHHhhcccCCCeEEEec---chhhhh------ccCCCceEEEEecCCCceEEEEeecCeecccceEEeeccHHHH
Q 017944 102 VREQLVQLMFETFNISGFYSSE---QAVLSL------YAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDL 172 (363)
Q Consensus 102 ~r~~l~e~lfe~~~~~~v~~~~---~~~~a~------~~~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l 172 (363)
++..+.+.+-+.+|++ +.+++ ++.++. +.....+++|+|+|+++|.++-+.++.+... ..+|+|.-.+
T Consensus 90 N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~--~Sl~lG~vrl 166 (315)
T 3mdq_A 90 NKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWK--QSFEIGGQRL 166 (315)
T ss_dssp THHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEE--EEESCCHHHH
T ss_pred CHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeee--EEEechhhHH
Confidence 3445666666667774 44444 332222 2222367999999999999999999988753 6789998877
Q ss_pred HHHH
Q 017944 173 TKLL 176 (363)
Q Consensus 173 ~~~l 176 (363)
++.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7643
No 31
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.54 E-value=0.0037 Score=57.39 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=48.1
Q ss_pred HHHHHHHHhhcccCCCeEEEec---chhhhhccC----C----CceEEEEecCCCceEEEEeec--Ceec--ccceEEee
Q 017944 102 VREQLVQLMFETFNISGFYSSE---QAVLSLYAV----G----RISGCTVDIGHGKIDIAPVIE--GAVQ--HIASRRFE 166 (363)
Q Consensus 102 ~r~~l~e~lfe~~~~~~v~~~~---~~~~a~~~~----g----~~tglVVDiG~~~t~v~pv~d--G~~~--~~~~~~~~ 166 (363)
+++.+.+-+-+.+|++ +.+++ ++.++..|. . ...++|||+|+++|.++.+.+ +.+. ......+|
T Consensus 103 N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Slp 181 (343)
T 3cer_A 103 NREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMN 181 (343)
T ss_dssp THHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEES
T ss_pred CHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEEe
Confidence 3455666666666764 44444 333333322 2 256999999999999999877 4431 11346789
Q ss_pred ccHHHHHHHH
Q 017944 167 VGGMDLTKLL 176 (363)
Q Consensus 167 ~GG~~l~~~l 176 (363)
+|+..+++.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9999998865
No 32
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.52 E-value=0.019 Score=51.22 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=42.9
Q ss_pred HHHHHhhcccCCCeEEEecchhhhhccC-----CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 105 QLVQLMFETFNISGFYSSEQAVLSLYAV-----GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 105 ~l~e~lfe~~~~~~v~~~~~~~~a~~~~-----g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
.+.+.+ +.+++| |++.++.-+++++. +..+.++|-+|.+ +-...|.||.+...
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 466677 888997 89999999998873 5678999999986 66777889988754
No 33
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=96.35 E-value=0.014 Score=56.58 Aligned_cols=153 Identities=14% Similarity=0.060 Sum_probs=83.3
Q ss_pred cEEEEcCCCcEEEeecCCCCCCceecccceeeccCCCccccCcccccCCceeccccCCeecCHHHHHHHHHHH--Hhhcc
Q 017944 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVDPVVRGFIRDWDAMEDLLHHV--LYAGL 80 (363)
Q Consensus 3 ~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~~~~~~g~~~~~~~~~~~~~p~~~g~i~~~~~~~~i~~~~--~~~~l 80 (363)
.-+||+||.++|.-.+. - .+.. + ..+......+-.| +. -...|.+ +.+.+++.++-+ |.+.+
T Consensus 13 ~AaIDiGSNSirL~I~~-~-~~~~-~-~~l~~~k~~vrLg-~g----------~~~~g~L-s~eai~r~~~~L~~f~~~~ 76 (513)
T 1u6z_A 13 FAAVDLGSNSFHMVIAR-V-VDGA-M-QIIGRLKQRVHLA-DG----------LGPDNML-SEEAMTRGLNCLSLFAERL 76 (513)
T ss_dssp EEEEEECSSCEEEEEEE-E-ETTE-E-EEEEEEEECCCTG-GG----------BCTTCCB-CHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeccccEEEEEEE-E-cCCe-e-EEEEeeEEEEecc-Cc----------ccccCCc-CHHHHHHHHHHHHHHHHHH
Confidence 35899999999988772 1 1211 1 1111111122233 21 1124544 345666555433 22222
Q ss_pred C-CCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecc---hhhhhcc----CCC-ceEEEEecCCCceEEEE
Q 017944 81 G-WEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQ---AVLSLYA----VGR-ISGCTVDIGHGKIDIAP 151 (363)
Q Consensus 81 ~-~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~---~~~a~~~----~g~-~tglVVDiG~~~t~v~p 151 (363)
+ ... .+..++-|. ..-...++..+.+-+-+.+|++ +.+++. +.++..| ... ..++|||||+++|.++-
T Consensus 77 ~~~~v-~~v~~vATs-A~R~A~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~ 153 (513)
T 1u6z_A 77 QGFSP-ASVCIVGTH-TLRQALNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVI 153 (513)
T ss_dssp TTCCG-GGEEEEECH-HHHHCTTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEE
T ss_pred HhCCC-CEEEEEecH-HHHcCcCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEE
Confidence 1 112 222233322 2212234556777777778874 455543 2222222 122 27999999999999999
Q ss_pred eecCeecccceEEeeccHHHHHHHH
Q 017944 152 VIEGAVQHIASRRFEVGGMDLTKLL 176 (363)
Q Consensus 152 v~dG~~~~~~~~~~~~GG~~l~~~l 176 (363)
..++.+.. ...+|+|.-.+++.+
T Consensus 154 ~~~~~~~~--~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 154 GENFEPIL--VESRRMGCVSFAQLY 176 (513)
T ss_dssp EETTEEEE--EEEESCCHHHHHHHH
T ss_pred EeCCeeeE--EEEEeccHHHHHHHH
Confidence 98888864 366899998887654
No 34
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=96.31 E-value=0.019 Score=55.59 Aligned_cols=72 Identities=14% Similarity=0.245 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhcccCCCeEEEec---chhhhhcc----CCCceEEEEecCCCceEEEEeecCeecccceEEeeccHHHHH
Q 017944 101 AVREQLVQLMFETFNISGFYSSE---QAVLSLYA----VGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLT 173 (363)
Q Consensus 101 ~~r~~l~e~lfe~~~~~~v~~~~---~~~~a~~~----~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~ 173 (363)
.++..+.+-+.+.+|++ +.+++ ++.++.+| .....++|||||+++|.++-+.+|.+... ..+|+|.-.++
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~~~--~Sl~lG~vrl~ 176 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCGEG--ITLPLGGLRLS 176 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEECCC--EEESCCHHHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeeeeE--EEecceEEehh
Confidence 34455666666667774 45544 33332222 23457899999999999999999988754 67899998877
Q ss_pred HH
Q 017944 174 KL 175 (363)
Q Consensus 174 ~~ 175 (363)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 63
No 35
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.77 E-value=0.12 Score=46.84 Aligned_cols=51 Identities=16% Similarity=-0.006 Sum_probs=38.9
Q ss_pred HHhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+-+.+++| |++.++.-+++++. +..+.++|-+|.+ +-...|.||.+...
T Consensus 114 ~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 171 (327)
T 4db3_A 114 ADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEECCEEeec
Confidence 3444567888 89999999887753 3578899999986 67777889988754
No 36
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.77 E-value=0.67 Score=41.20 Aligned_cols=50 Identities=16% Similarity=0.054 Sum_probs=38.0
Q ss_pred HhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 109 LMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 109 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
.+-+.+++| |++.++.-+++++- +..+.++|-+|.+ .-...|.||.++..
T Consensus 92 ~l~~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 148 (297)
T 4htl_A 92 WLEAETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIFSNGELVRG 148 (297)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEEECCEEEec
Confidence 333567888 89999988887753 4578899999986 66677889988763
No 37
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.54 E-value=0.18 Score=45.46 Aligned_cols=51 Identities=10% Similarity=0.156 Sum_probs=39.6
Q ss_pred HHhhcccCCCeEEEecchhhhhcc-------CCCceEEEEecCCCceEEEEeecCeeccc
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYA-------VGRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~-------~g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+-+.+++| |++.++.-+++++ .+..+.++|-+|.+ +-...|.||.++..
T Consensus 90 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 147 (321)
T 3vgl_A 90 DKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRRG 147 (321)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEecC
Confidence 3334566887 8999999998876 24578999999987 77778889998764
No 38
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.47 E-value=0.076 Score=47.96 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=38.6
Q ss_pred HhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 109 LMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 109 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
.+-+.+++| +++.++.-+++++. +..+.++|-+|.+ +-...+.||.++..
T Consensus 103 ~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 103 QIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 333456787 88999999988762 4578999999998 66778889988763
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=95.36 E-value=0.094 Score=46.61 Aligned_cols=49 Identities=18% Similarity=0.077 Sum_probs=38.1
Q ss_pred hcCeEEccC-cccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCCcceeeeechhhhh
Q 017944 277 LENTVLCGG-TTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILA 335 (363)
Q Consensus 277 ~~nIvl~GG-~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a 335 (363)
.++|+++|| .+..|++.++|++.+.+. ..+++-+++ +++...+||.+++
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~----~~~~~~p~~------~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLR----GCKPYYVEN------GAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHT----TCEEEECTT------GGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhC----CceEEECCC------ccHHHHHHHHHhC
Confidence 357999999 999999999999886322 334554555 7899999999875
No 40
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=94.94 E-value=0.19 Score=44.99 Aligned_cols=51 Identities=20% Similarity=0.203 Sum_probs=38.0
Q ss_pred HHhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+-+.+++| |++.++.-+++++. +..+.++|-+|.+ .-...|.||++...
T Consensus 92 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 92 RILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 3344567887 88999998887653 4578899999986 66667789988754
No 41
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=94.27 E-value=0.18 Score=46.24 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCceEEEEcCCC---CCHHHHHHHHHHhhccc-------CCCeEEEecch---hh----
Q 017944 65 WDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLC---SPKAVREQLVQLMFETF-------NISGFYSSEQA---VL---- 127 (363)
Q Consensus 65 ~~~~~~i~~~~~~~~l~~~~~~~~~v~l~~~~~---~~~~~r~~l~e~lfe~~-------~~~~v~~~~~~---~~---- 127 (363)
-+.+++.++ -|.+ . ... ...|+.+....- .+...++.+.+.+-+.+ +. .+.+++.. .+
T Consensus 52 ~~~~~~~l~-~f~~-~-~~~-~~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~g 126 (353)
T 3aap_A 52 SVTIDAYLT-MLLA-D-API-HNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLA 126 (353)
T ss_dssp HHHHHHHHH-HHHT-T-CSC-CSEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHH-H-Hhc-CCCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHH
Confidence 456666666 3323 1 112 334555554432 23344666666665554 32 45555432 22
Q ss_pred hhccCC------CceEEEEecCCCceEEEEeec--CeecccceEEeeccHH
Q 017944 128 SLYAVG------RISGCTVDIGHGKIDIAPVIE--GAVQHIASRRFEVGGM 170 (363)
Q Consensus 128 a~~~~g------~~tglVVDiG~~~t~v~pv~d--G~~~~~~~~~~~~GG~ 170 (363)
+.+..+ ..+.+|+|+|+++|.++-..+ +.+.......+++||.
T Consensus 127 v~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 127 VNYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp HHHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred HHHHhhhccccccccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 233333 246999999999999997754 3343333466787764
No 42
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=93.97 E-value=0.28 Score=44.87 Aligned_cols=173 Identities=12% Similarity=0.123 Sum_probs=86.3
Q ss_pred ceEEEEecCCCceEEEEee-cCeecccceEEeeccHHHHHHHHHHHHhccCCCccccHHHHHHHHHHcccccCC--HHHH
Q 017944 135 ISGCTVDIGHGKIDIAPVI-EGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLKEQFSCCAED--ELAY 211 (363)
Q Consensus 135 ~tglVVDiG~~~t~v~pv~-dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~iK~~~~~v~~~--~~~~ 211 (363)
..-||||||.+. .++-|. +|.-. .+..+.+||-.+-.... +|... .+.+.+-++-.+=-.-..| -.+.
T Consensus 175 ~PyllVnIGsGv-Siikv~~~~~f~--rvgG~siGGGTflGL~~-lLtg~-----~~~dEl~~lA~~Gd~~~vDllV~DI 245 (360)
T 2i7n_A 175 YPMLLVNMGSGV-SILAVYSKDNYK--RVTGTSLGGGTFLGLCC-LLTGC-----ETFEEALEMAAKGDSTNVDKLVKDI 245 (360)
T ss_dssp CSEEEEEESSSE-EEEEEEETTEEE--EEEEESCSHHHHHHHHH-HHHCC-----CSHHHHHHHHHHCCGGGTSEEHHHH
T ss_pred CceEEEEeCCCc-EEEEEcCCCCEE--EeccccCccHhHHHHHH-HHhCC-----CCHHHHHHHHHcCCCCcccceeeec
Confidence 347899999976 777776 55333 24557899988887777 54321 1222222222110000000 0010
Q ss_pred HHhcccCCCceeECCCCcEEEEeceeccccccccCCC-CCCcc----cccHHHHHHHHHHcCCh-hHHHHhhcCeEEccC
Q 017944 212 EKTQKSCEIEQHTLPDGQVIRIGKERYTVGEALFQPS-ILGLE----AHGIVEQLVHTISTVSS-ENHRQLLENTVLCGG 285 (363)
Q Consensus 212 ~~~~~~~~~~~~~lp~~~~i~i~~~r~~~~E~lF~p~-~~~~~----~~~l~~~I~~~i~~~~~-~~r~~l~~nIvl~GG 285 (363)
- ......+.||....-.. +.++ +... .-+.. ..+|..+|.+.|.++-. .-++.=.++|+++||
T Consensus 246 Y----g~~y~~~gL~~~~~ASs------FGk~-~~~~~~~~~~~eDIa~gll~sVa~~I~~lA~l~A~~~~i~~IvftGg 314 (360)
T 2i7n_A 246 Y----GGDYERFGLQGSAVASS------FGNM-MSKEKRDSISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGN 314 (360)
T ss_dssp H----SSCBGGGTBCTTSEEET------TTTT-TSHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEESG
T ss_pred c----cCcccccCCCccceeeh------hhhH-hhHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 0 00001112433322221 1122 1100 00111 23455555555444321 113333468999999
Q ss_pred -cccccchHHHHHhhhc-cCCCCcceEEeCCCCCCCcCCcceeeeechhhhh
Q 017944 286 -TTSMTGFEDRFQKEAG-LCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILA 335 (363)
Q Consensus 286 -~s~l~G~~~rL~~eL~-~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a 335 (363)
.+..|++.+.|++.|. -.....++.+.. + +.++..+||.+.+
T Consensus 315 fla~n~~~~~~L~~~l~~ws~g~~~~~~~~--~------~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 315 FLRINMVSMKLLAYAMDFWSKGQLKALFLE--H------EGYFGAVGALLEL 358 (360)
T ss_dssp GGCSSSHHHHHHHHHHHHHTTTSCCEEEET--T------TTCHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHhhhhcCCeeEEEcC--C------ccHHHHHHHHHHh
Confidence 9999999999999982 222223444443 3 5689999998864
No 43
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.18 E-value=0.92 Score=41.86 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=38.3
Q ss_pred HHhhcccCCCeEEEecchhhhhccC-----CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAV-----GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~-----g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+-+.+++| |++.++.-+++++. +..+.++|-+|.+ +-...|.||.+...
T Consensus 182 ~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (380)
T 2hoe_A 182 NLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYRG 237 (380)
T ss_dssp HHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECCC
T ss_pred HHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEecc
Confidence 3333556886 89999999888763 3378999999986 66778889988754
No 44
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=92.98 E-value=0.36 Score=43.52 Aligned_cols=50 Identities=14% Similarity=0.186 Sum_probs=38.9
Q ss_pred Hhhccc-CCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 109 LMFETF-NISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 109 ~lfe~~-~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
.+-+.+ ++| |++.++.-+++++- +..+.++|-+|.+ +-...|.||.++..
T Consensus 112 ~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~G 169 (321)
T 3r8e_A 112 ILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFIG 169 (321)
T ss_dssp HHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEecC
Confidence 333567 776 88999999887752 4578999999987 77778889998764
No 45
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=91.75 E-value=0.13 Score=46.46 Aligned_cols=25 Identities=36% Similarity=0.558 Sum_probs=23.6
Q ss_pred ceEEEEecCCCceEEEEeecCeecc
Q 017944 135 ISGCTVDIGHGKIDIAPVIEGAVQH 159 (363)
Q Consensus 135 ~tglVVDiG~~~t~v~pv~dG~~~~ 159 (363)
.++++||||+.+|+++|+.+|.|+.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999976
No 46
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=90.42 E-value=2.5 Score=36.53 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=19.2
Q ss_pred CceEEEEecCCCceEEEEeecCeeccc
Q 017944 134 RISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 134 ~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
...++|||+|...|--+. .+|.-+-.
T Consensus 121 ~~~~iVvD~GTA~T~d~v-~~g~~lGG 146 (249)
T 3bex_A 121 GKNGIIIDMGTATTVDLV-VNGSYEGG 146 (249)
T ss_dssp CSCEEEEEESSEEEEEEE-ETTEEEEE
T ss_pred CCCEEEEEcCCceEEEEE-eCCeEeeE
Confidence 367999999997665555 88866543
No 47
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=90.32 E-value=2.5 Score=36.94 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=14.9
Q ss_pred cEEEEcCCCcEEEeec
Q 017944 3 AAVVDAGSKLLKAGPA 18 (363)
Q Consensus 3 ~vViD~Gs~~~k~G~~ 18 (363)
-++||+|.+++|+|+.
T Consensus 4 lL~IDIGNT~iK~gl~ 19 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVF 19 (266)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEECCCeEEEEEE
Confidence 5789999999999998
No 48
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=90.11 E-value=1.9 Score=37.73 Aligned_cols=15 Identities=27% Similarity=0.239 Sum_probs=14.2
Q ss_pred EEEEcCCCcEEEeec
Q 017944 4 AVVDAGSKLLKAGPA 18 (363)
Q Consensus 4 vViD~Gs~~~k~G~~ 18 (363)
++||+|.+++|+|+.
T Consensus 3 L~IDIGNT~ik~gl~ 17 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVF 17 (268)
T ss_dssp EEEEECSSEEEEEEE
T ss_pred EEEEECcCcEEEEEE
Confidence 689999999999998
No 49
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=89.87 E-value=0.6 Score=44.13 Aligned_cols=90 Identities=10% Similarity=0.112 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhccCCCCCCCceEEEEcCCCCC------HHHHHHHHHHhhccc---CC--CeEEEecch-------hh
Q 017944 66 DAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSP------KAVREQLVQLMFETF---NI--SGFYSSEQA-------VL 127 (363)
Q Consensus 66 ~~~~~i~~~~~~~~l~~~~~~~~~v~l~~~~~~~------~~~r~~l~e~lfe~~---~~--~~v~~~~~~-------~~ 127 (363)
+.+..+++.+... ...+.-...|+.+....-.- ...++.+.+.+-+.+ ++ ..+.+++.. ++
T Consensus 89 ~~l~~Ll~~a~~~-vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMSTER-IPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHHHH-SCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 4566666665421 11111145677776654321 123445555443333 22 456666533 33
Q ss_pred hhccCCC------ceEEEEecCCCceEEEEeecCe
Q 017944 128 SLYAVGR------ISGCTVDIGHGKIDIAPVIEGA 156 (363)
Q Consensus 128 a~~~~g~------~tglVVDiG~~~t~v~pv~dG~ 156 (363)
+.|..|. .+..++|+|+++|.|+=..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 3334452 5667889999999998766553
No 50
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=86.97 E-value=0.87 Score=43.17 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=18.5
Q ss_pred ceEEEEecCCCceEEEEeecCe
Q 017944 135 ISGCTVDIGHGKIDIAPVIEGA 156 (363)
Q Consensus 135 ~tglVVDiG~~~t~v~pv~dG~ 156 (363)
.+..|+|+|+++|.++-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4678999999999999886654
No 51
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=85.36 E-value=5.6 Score=34.91 Aligned_cols=70 Identities=13% Similarity=0.071 Sum_probs=48.7
Q ss_pred eEEEEcCCCCCHHHHHHHHHHhhcccCC-CeEEEecchhhhhcc-CCCceEEEEecCCCceEEEEeecCeecc
Q 017944 89 QILFTDPLCSPKAVREQLVQLMFETFNI-SGFYSSEQAVLSLYA-VGRISGCTVDIGHGKIDIAPVIEGAVQH 159 (363)
Q Consensus 89 ~v~l~~~~~~~~~~r~~l~e~lfe~~~~-~~v~~~~~~~~a~~~-~g~~tglVVDiG~~~t~v~pv~dG~~~~ 159 (363)
.+-+..|-.. ......+.+.+-+.++. ..+.+.++.-+++++ .+..++++|=+|.+..-...+.||++..
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~~ 133 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKAN 133 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEEE
Confidence 4666666554 22223455555556675 359999999999998 5778899999999876566667898753
No 52
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=84.71 E-value=9.6 Score=33.68 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=39.3
Q ss_pred HHhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeecccc
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHIA 161 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~~ 161 (363)
+.+-+.+++| |++.++.-+++++- +..+.+.|-+|.+ .-...|.||+++...
T Consensus 91 ~~l~~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G~ 149 (302)
T 3epq_A 91 QTVXNEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIVEGRLLQGL 149 (302)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCSS
T ss_pred HHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEcccC
Confidence 3344567888 89999998888753 4578899999985 667778899988653
No 53
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=84.45 E-value=3.8 Score=36.64 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=38.0
Q ss_pred HhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 109 LMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 109 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
.+-+.+++| |++.++.-+++++. +..+.++|-+|.+ +-...|.+|.+...
T Consensus 115 ~l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 171 (327)
T 2ap1_A 115 DLSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPITG 171 (327)
T ss_dssp HHHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 333456887 89999999988752 3578899999987 66777889988764
No 54
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=83.90 E-value=7.4 Score=34.36 Aligned_cols=127 Identities=14% Similarity=0.161 Sum_probs=69.4
Q ss_pred cEEEEcCCCcEEEeecCCCCCCceecccceeeccCCCccccCcccccCCceeccccCCeecCHHHHHHHHHHHHhhccCC
Q 017944 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVDPVVRGFIRDWDAMEDLLHHVLYAGLGW 82 (363)
Q Consensus 3 ~vViD~Gs~~~k~G~~~ge~~P~~~~ps~~~~~~~~~~~g~~~~~~~~~~~~~p~~~g~i~~~~~~~~i~~~~~~~~l~~ 82 (363)
.|.||+|++++|+++. ..+.- ..-... .. ..+...+.-.-++.+.+.++.++.+ ...
T Consensus 13 ~lGiDiGgT~i~~~l~-d~~G~-il~~~~---------~~-----------~~~~~~~~~~~~~~l~~~i~~~l~~-~~~ 69 (305)
T 1zc6_A 13 LIGVDGGGTGTRIRLH-ASDGT-PLAMAE---------GG-----------ASALSQGIAKSWQAVLSTLEAAFQQ-AGL 69 (305)
T ss_dssp EEEEEECSSCEEEEEE-ETTCC-EEEEEE---------ES-----------CCCGGGCHHHHHHHHHHHHHHHHHH-TTC
T ss_pred EEEEEcCccceEEEEE-cCCCC-EEEEEe---------CC-----------CCCcccCHHHHHHHHHHHHHHHHHh-cCC
Confidence 4679999999999998 33221 110000 00 0000111111244555666665533 333
Q ss_pred CCCCC---ceEEEEcCCCCCHHHHHHHHHHhhccc--CCCeEEEecchhhhhccC-CCceEEEEecCCCceEEEEeecCe
Q 017944 83 EEGNE---GQILFTDPLCSPKAVREQLVQLMFETF--NISGFYSSEQAVLSLYAV-GRISGCTVDIGHGKIDIAPVIEGA 156 (363)
Q Consensus 83 ~~~~~---~~v~l~~~~~~~~~~r~~l~e~lfe~~--~~~~v~~~~~~~~a~~~~-g~~tglVVDiG~~~t~v~pv~dG~ 156 (363)
+. .+ ..+-+..|-.........+ -+.+ +. .+++.++.-+++++. +..++++|-+|.+..-...+.||.
T Consensus 70 ~~-~~i~~~~igig~pG~v~~~~~~~l----~~~~~~~~-pv~v~NDa~aaa~ge~~~~~~v~v~~GTGigg~~i~~~G~ 143 (305)
T 1zc6_A 70 PA-APASACAIGLGLSGVHNRQWAGEF----ESQAPGFA-RLSLATDGYTTLLGAHGGQPGIIVALGTGSIGEALYPDGS 143 (305)
T ss_dssp CC-CCGGGEEEEEEESCCCTTSHHHHH----HHTCCCCS-EEEEECHHHHHHHHHTTTSSEEEEEESSSEEEEEECTTSC
T ss_pred Ch-hhhccceEEEEecCCCchHHHHHH----HHhCCCCc-eEEEECCHHHHHHhhcCCCCeEEEEecCCeEEEEEeCCCc
Confidence 33 33 2466667755433222222 2234 34 489999999998884 567889999999874344444887
Q ss_pred ec
Q 017944 157 VQ 158 (363)
Q Consensus 157 ~~ 158 (363)
..
T Consensus 144 ~~ 145 (305)
T 1zc6_A 144 HR 145 (305)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 55
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=81.44 E-value=16 Score=32.60 Aligned_cols=92 Identities=10% Similarity=0.060 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhhccCCCCC-CCceEEEEcCCCCCHHHHHHHHHHhhcccC---CCeEEEecchhhhhccCCCceEEEE
Q 017944 65 WDAMEDLLHHVLYAGLGWEEG-NEGQILFTDPLCSPKAVREQLVQLMFETFN---ISGFYSSEQAVLSLYAVGRISGCTV 140 (363)
Q Consensus 65 ~~~~~~i~~~~~~~~l~~~~~-~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~---~~~v~~~~~~~~a~~~~g~~tglVV 140 (363)
|+.+.+.++.++.+ ...+.. .-..+-+..|-.........+.+.+-+.++ . .|.+.++.-+++++....++++|
T Consensus 49 ~~~i~~~i~~~~~~-~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~-pv~v~NDa~aaa~a~~~~~~v~v 126 (347)
T 2ch5_A 49 VERINEMVNRAKRK-AGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSE-SYLITTDAAGSIATATPDGGVVL 126 (347)
T ss_dssp HHHHHHHHHHHHHH-HTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBS-CEEEEEHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHHHh-cCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCc-eEEEECcHHHHHHhhCCCCcEEE
Confidence 44555566655543 233321 123567777776665544556666656665 4 48899999888888534678888
Q ss_pred ecCCCceEEEEeecCeec
Q 017944 141 DIGHGKIDIAPVIEGAVQ 158 (363)
Q Consensus 141 DiG~~~t~v~pv~dG~~~ 158 (363)
-+|.+.-......+|...
T Consensus 127 ~~GTGig~~~v~~~G~~c 144 (347)
T 2ch5_A 127 ISGTGSNCRLINPDGSES 144 (347)
T ss_dssp EESSSEEEEEECTTSCEE
T ss_pred EEcCCceeEEEcCCCCEE
Confidence 889876544333466543
No 56
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=74.46 E-value=32 Score=31.36 Aligned_cols=72 Identities=10% Similarity=0.040 Sum_probs=43.1
Q ss_pred cCeEEccCcccccc-hHHHHHhhh-ccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhccCCCCce-----eeehHHH
Q 017944 278 ENTVLCGGTTSMTG-FEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQ-----HITKADY 350 (363)
Q Consensus 278 ~nIvl~GG~s~l~G-~~~rL~~eL-~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l~~~~~~-----~itk~ey 350 (363)
+.|||+||.+...- |.+++++.+ ... ++.+..... ...+..+||..++.-..-... --.++.|
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~------~~~a~~~GAa~l~~~~~~~~~~~~~~~~~~~~~ 366 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSN------EEKALALSALRVLRGEEKPKNYSEESRRWRERY 366 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCC------HHHHHHHHHHHHHTTSSCCEEHHHHHHHHHHHH
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCc------chhHHHHHHHHHHcCCcccccchhHhHHHHHHH
Confidence 46999999887655 889999988 443 344543332 334677888887653211110 1135566
Q ss_pred hhcCccchh
Q 017944 351 DESGPSVVH 359 (363)
Q Consensus 351 ~e~G~~~~~ 359 (363)
+-++..+++
T Consensus 367 ~~~~~~~~~ 375 (381)
T 1saz_A 367 DSYLDGILR 375 (381)
T ss_dssp HHHTGGGCC
T ss_pred Hhhhhhhhh
Confidence 666665554
No 57
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=69.98 E-value=24 Score=30.69 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=14.3
Q ss_pred EEEEcCCCcEEEeec
Q 017944 4 AVVDAGSKLLKAGPA 18 (363)
Q Consensus 4 vViD~Gs~~~k~G~~ 18 (363)
++||+|-+++|+|+.
T Consensus 26 L~IDiGNT~ik~g~~ 40 (271)
T 2f9w_A 26 LELDCGNSLIKWRVI 40 (271)
T ss_dssp EEEEECSSCEEEEEE
T ss_pred EEEEeCCCeeEEEEE
Confidence 789999999999998
No 58
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=68.23 E-value=39 Score=29.34 Aligned_cols=61 Identities=21% Similarity=0.178 Sum_probs=41.0
Q ss_pred eEEEEcCCCCCHHHHHHHHHHhhcccCCCeEEEecchhhhhccCC-CceEEEEecCCCceEEEEeecCe
Q 017944 89 QILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVG-RISGCTVDIGHGKIDIAPVIEGA 156 (363)
Q Consensus 89 ~v~l~~~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~~a~~~~g-~~tglVVDiG~~~t~v~pv~dG~ 156 (363)
.+-+..|-..+......+.+.+-+ ++. .+.+.++.-+++++.. ..++++|-+|.+. |.+|+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~-pv~v~ND~~aaa~~e~~~~~~v~l~~GTG~-----i~~g~ 123 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAP-KVIIQHDGVIALFAETLGEPGVVVIAGTGS-----VVEGY 123 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSS-EEEEEEHHHHHHHHHHTTSCEEEEEESSSE-----EEEEE
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCC-CEEEeCcHHHHHhhccCCCCeEEEEecCCE-----EEEEE
Confidence 466667766444333445555545 775 4788999988888753 5788999999983 44565
No 59
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=56.12 E-value=16 Score=31.85 Aligned_cols=55 Identities=11% Similarity=0.161 Sum_probs=39.8
Q ss_pred HHHHHhhcccCC-CeEEEecchhhhhccC-CCceEEEEecCCCceEEEEeecCeecc
Q 017944 105 QLVQLMFETFNI-SGFYSSEQAVLSLYAV-GRISGCTVDIGHGKIDIAPVIEGAVQH 159 (363)
Q Consensus 105 ~l~e~lfe~~~~-~~v~~~~~~~~a~~~~-g~~tglVVDiG~~~t~v~pv~dG~~~~ 159 (363)
.+.+.+-+.++. ..+.+.++.-+++++. +..++++|=+|.+..-...+.||....
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~~ 131 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVSN 131 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEEE
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEEE
Confidence 344444455664 2489999999999965 678888888999875566677887753
No 60
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=54.96 E-value=4.9 Score=35.10 Aligned_cols=51 Identities=12% Similarity=0.031 Sum_probs=38.7
Q ss_pred HHHhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 107 VQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 107 ~e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
.+.+-+.+++| +++.++.-+++++. +. +.++|.+|.+ +-...+.||.+...
T Consensus 89 ~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~G 146 (289)
T 2aa4_A 89 VKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLTG 146 (289)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEeeC
Confidence 33444556887 88999999888763 34 8999999998 67788889988753
No 61
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=48.23 E-value=8.7 Score=35.09 Aligned_cols=23 Identities=26% Similarity=0.471 Sum_probs=21.5
Q ss_pred cCeEEccCcccccchHHHHHhhh
Q 017944 278 ENTVLCGGTTSMTGFEDRFQKEA 300 (363)
Q Consensus 278 ~nIvl~GG~s~l~G~~~rL~~eL 300 (363)
..|++|||++.-|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 56999999999999999999888
No 62
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=42.66 E-value=11 Score=34.34 Aligned_cols=23 Identities=17% Similarity=0.330 Sum_probs=21.4
Q ss_pred cCeEEccCcccccchHHHHHhhh
Q 017944 278 ENTVLCGGTTSMTGFEDRFQKEA 300 (363)
Q Consensus 278 ~nIvl~GG~s~l~G~~~rL~~eL 300 (363)
..|++|||++.-|-|.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999999888
No 63
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=40.28 E-value=45 Score=28.70 Aligned_cols=65 Identities=14% Similarity=0.164 Sum_probs=41.9
Q ss_pred HHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh-ccCCCCcceEEeCCCCCCCcCCcceeeeechhhhh
Q 017944 257 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILA 335 (363)
Q Consensus 257 l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a 335 (363)
|...+.+.+..+++ +.|+|.||.+..+-|.+++++.+ +.... ..+.+..... ...++.+||..++
T Consensus 221 L~~~i~~l~~~l~p-------~~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~------~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 221 LARLIADIKATTDC-------QCVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHY------RHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHHCC-------SEEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSC------SSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-------CEEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCC------CCchHHHHHHHHH
Confidence 55666666666655 35889898877788999999998 43211 2344433322 3466778888765
No 64
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=39.18 E-value=19 Score=32.42 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=22.2
Q ss_pred hcCeEEccCcccccchHHHHHhhh
Q 017944 277 LENTVLCGGTTSMTGFEDRFQKEA 300 (363)
Q Consensus 277 ~~nIvl~GG~s~l~G~~~rL~~eL 300 (363)
.++|+++||.++-..+.++|.+.+
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l 273 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMA 273 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHH
Confidence 368999999999999999999998
No 65
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=38.97 E-value=26 Score=32.05 Aligned_cols=54 Identities=20% Similarity=0.279 Sum_probs=38.5
Q ss_pred HHHHHhhcccCCCeEEEecchh---------hhhc-----------------c------CCC--c--eEEEEecCCCceE
Q 017944 105 QLVQLMFETFNISGFYSSEQAV---------LSLY-----------------A------VGR--I--SGCTVDIGHGKID 148 (363)
Q Consensus 105 ~l~e~lfe~~~~~~v~~~~~~~---------~a~~-----------------~------~g~--~--tglVVDiG~~~t~ 148 (363)
.+.+.+-+.+++|. ++.+++- ++++ + .++ . +.+++.+|.+ +.
T Consensus 111 ~l~~~l~~~~~~Pv-~v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtG-iG 188 (381)
T 1saz_A 111 IIAHRFSSETGVPA-YVVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGG-IS 188 (381)
T ss_dssp HHHHHHHHHHCCCE-EEESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSS-EE
T ss_pred HHHHHHHHhcCCCE-EEeCCCccccCcHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCC-cE
Confidence 45555667789996 4888876 5555 2 233 4 8899999986 57
Q ss_pred EEEeecCeeccc
Q 017944 149 IAPVIEGAVQHI 160 (363)
Q Consensus 149 v~pv~dG~~~~~ 160 (363)
...|.||+++..
T Consensus 189 ~g~i~~G~~~~G 200 (381)
T 1saz_A 189 IAAHRKGRVIDV 200 (381)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCEEEEe
Confidence 778889988754
No 66
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=34.21 E-value=23 Score=31.65 Aligned_cols=24 Identities=17% Similarity=0.342 Sum_probs=22.2
Q ss_pred hcCeEEccCcccccchHHHHHhhh
Q 017944 277 LENTVLCGGTTSMTGFEDRFQKEA 300 (363)
Q Consensus 277 ~~nIvl~GG~s~l~G~~~rL~~eL 300 (363)
.++|+++||.++-..+.++|.+.+
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l 268 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMT 268 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHHHH
Confidence 458999999999999999999988
No 67
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=34.14 E-value=27 Score=30.44 Aligned_cols=45 Identities=22% Similarity=0.082 Sum_probs=29.5
Q ss_pred cCeEEccCcccccchHHHHHhhh-ccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhc
Q 017944 278 ENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 336 (363)
Q Consensus 278 ~nIvl~GG~s~l~G~~~rL~~eL-~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~ 336 (363)
..|+|.||.+..+-|.++|++.+ +. ++.... .+ .++.+||..++.
T Consensus 241 ~~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~~-~~--------~~~~~GAa~la~ 286 (299)
T 2e2o_A 241 NKVYLKGGMFRSNIYHKFFTLYLEKE-----GIISDL-GK--------RSPEIGAVILAY 286 (299)
T ss_dssp SEEEEESGGGGSHHHHHHHHHHHHHT-----TCEEEC-CS--------CCHHHHHHHHHH
T ss_pred CEEEEECCccCcHHHHHHHHHHCCCC-----eEeccC-CC--------CChHHHHHHHHH
Confidence 35888888776666777777777 32 344443 22 556789888764
No 68
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=29.90 E-value=1e+02 Score=26.51 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=33.9
Q ss_pred EEEEecCCCceEEEEeecCeecccceEEe-eccHHHHHHHHHHHHhccCC
Q 017944 137 GCTVDIGHGKIDIAPVIEGAVQHIASRRF-EVGGMDLTKLLAQELGKTNP 185 (363)
Q Consensus 137 glVVDiG~~~t~v~pv~dG~~~~~~~~~~-~~GG~~l~~~l~~~l~~~~~ 185 (363)
-|+||+|...+....+-++..+....... ....+.+...+.+++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 38999999999888888777664422111 24567777778888876554
No 69
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=29.15 E-value=11 Score=19.90 Aligned_cols=14 Identities=21% Similarity=0.529 Sum_probs=11.2
Q ss_pred eeeehHHHhhcCcc
Q 017944 343 QHITKADYDESGPS 356 (363)
Q Consensus 343 ~~itk~ey~e~G~~ 356 (363)
..+|-++|+|+|..
T Consensus 9 i~ls~~~y~~yG~~ 22 (26)
T 2jsh_A 9 IKLSGAQYQQHGRA 22 (26)
T ss_dssp GGGHHHHCSCSSSC
T ss_pred eEecHHHHHHHhHH
Confidence 46788999999963
No 70
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=27.67 E-value=1e+02 Score=26.15 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=39.1
Q ss_pred HHHHhhcccCCCeEEEecchhhhhccC-----C--Cc-eEEEEecCCCceEEEEeecCeeccc
Q 017944 106 LVQLMFETFNISGFYSSEQAVLSLYAV-----G--RI-SGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 106 l~e~lfe~~~~~~v~~~~~~~~a~~~~-----g--~~-tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+.+-+.+++| |++.++.-+++++- + .. +.++|-+|.+ .-...|.||.+...
T Consensus 106 l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~~G~l~~G 166 (267)
T 1woq_A 106 IDALLTARLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIFDGKLVPN 166 (267)
T ss_dssp HHHHHHHHHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEETTEEETT
T ss_pred HHHHHHHHHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEECCEEccC
Confidence 334444567888 89999999988762 2 23 5678899986 77888999988764
No 71
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=27.13 E-value=79 Score=29.14 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=38.7
Q ss_pred HHhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 108 QLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 108 e~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+-+.+++| |++.++.-+++++. +..+.++|-+|.+ +-...|.||.+...
T Consensus 202 ~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 259 (429)
T 1z05_A 202 PEIYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVLDGRVLQG 259 (429)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCT
T ss_pred HHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEECCEEeeC
Confidence 3333556887 89999999988763 4578999999986 66778889987753
No 72
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=26.11 E-value=83 Score=28.65 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=38.3
Q ss_pred HhhcccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 109 LMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 109 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
.+-+.+++| |++.++.-+++++. +..+.++|-+|.+ +-...|.||.+...
T Consensus 181 ~l~~~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (406)
T 1z6r_A 181 ALEQHTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVITDGHLLHA 237 (406)
T ss_dssp HHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEETTT
T ss_pred HHHHHHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 333556887 88999998888752 4578999999986 66778889988764
No 73
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=26.06 E-value=56 Score=30.75 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=33.0
Q ss_pred cCeEEccCcccccchHHHHHhhhccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhcc
Q 017944 278 ENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 337 (363)
Q Consensus 278 ~nIvl~GG~s~l~G~~~rL~~eL~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l 337 (363)
+.|.++||.|+-+-+.+.+..-+ +.++.+.... ..++-+||+++|..
T Consensus 388 ~~i~~~GG~a~s~~~~Qi~Adv~-----g~pV~~~~~~--------e~~~alGAA~lA~~ 434 (484)
T 2itm_A 388 QSVTLIGGGARSEYWRQMLADIS-----GQQLDYRTGG--------DVGPALGAARLAQI 434 (484)
T ss_dssp SCEEEESGGGCCHHHHHHHHHHH-----CCCEEEESCT--------TSCHHHHHHHHHHH
T ss_pred ceEEEEeccccCHHHHHHHHHHh-----CCeEEeCCCC--------CcccHHHHHHHHHH
Confidence 56999999999888877777666 2345554432 24467899998864
No 74
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=26.03 E-value=71 Score=28.32 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=36.5
Q ss_pred cccCCCeEEEecchhhhhccC-------CCceEEEEecCCCceEEEEeecCeeccc
Q 017944 112 ETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 112 e~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+++| +++.++.-+++++. +..+.++|-+|.+ .-...+.||.+...
T Consensus 129 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~G 182 (343)
T 2yhw_A 129 DTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIHG 182 (343)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEecC
Confidence 446787 88999998887753 4578999999987 66778889988753
No 75
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=25.49 E-value=41 Score=29.57 Aligned_cols=53 Identities=21% Similarity=0.132 Sum_probs=38.6
Q ss_pred HHHHhhcccCCCeEEEecchhhhhcc------CCCceEEEEecCCCceEEEEeecCeeccc
Q 017944 106 LVQLMFETFNISGFYSSEQAVLSLYA------VGRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (363)
Q Consensus 106 l~e~lfe~~~~~~v~~~~~~~~a~~~------~g~~tglVVDiG~~~t~v~pv~dG~~~~~ 160 (363)
+.+.+-+.+++| |++.++.-+++++ .+..+.+.|-+|.+ .-...|.||+++..
T Consensus 99 l~~~l~~~~~~p-v~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtG-iG~gii~~G~l~~G 157 (310)
T 3htv_A 99 LADKLENTLNCP-VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTG-MGFAVWMNGAPWTG 157 (310)
T ss_dssp HHHHHHHHHTSC-EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHHHhCCC-EEEeeHHHHHHHHHHhhcccCCceEEEEEecee-EEEEEEECCEEeec
Confidence 455555677887 8888888887753 24567888899974 66677889998865
No 76
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=25.46 E-value=32 Score=30.59 Aligned_cols=72 Identities=15% Similarity=0.086 Sum_probs=39.8
Q ss_pred cHHHHHHHHHHcCChhHHHH-hhcCeEEccCccc-ccchHHHHHhhh-ccC--CC---CcceEEeCCCCCCCcCCcceee
Q 017944 256 GIVEQLVHTISTVSSENHRQ-LLENTVLCGGTTS-MTGFEDRFQKEA-GLC--SS---AIRPTLVKPPEYMPENLTLYSA 327 (363)
Q Consensus 256 ~l~~~I~~~i~~~~~~~r~~-l~~nIvl~GG~s~-l~G~~~rL~~eL-~~~--~~---~~~i~v~~~~~~~~~~~~~~~~ 327 (363)
-|...|.+.+..++++.... --..|+|.||.+. .+-|.+++++.+ +.. +. ..++.+... .. ++
T Consensus 244 ~La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--------~~-a~ 314 (347)
T 2ch5_A 244 MLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--------RH-SS 314 (347)
T ss_dssp HHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--------SS-CT
T ss_pred HHHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--------CC-Ch
Confidence 35666666666666641100 0015888888764 377778888888 432 21 223333321 23 67
Q ss_pred eechhhhhc
Q 017944 328 WIGGAILAK 336 (363)
Q Consensus 328 w~Gasi~a~ 336 (363)
.+||..++.
T Consensus 315 ~~GAa~la~ 323 (347)
T 2ch5_A 315 ALGGASLGA 323 (347)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 789988763
No 77
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=24.59 E-value=39 Score=33.19 Aligned_cols=44 Identities=2% Similarity=0.054 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhcccC
Q 017944 65 WDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFN 115 (363)
Q Consensus 65 ~~~~~~i~~~~~~~~l~~~~~~~~~v~l~~~~~~~~~~r~~l~e~lfe~~~ 115 (363)
-+.++.|=+|+| .. +++||+|+.-...+..+..++++++-+.||
T Consensus 235 ~~v~~~I~~~AF------~~-s~yPvilslE~Hc~~~qQ~~ma~~~~~~~g 278 (624)
T 1djx_A 235 CDVLRAIRDYAF------KA-SPYPVILSLENHCSLEQQRVMARHLRAILG 278 (624)
T ss_dssp HHHHHHHHHHTT------TS-CSSCEEEEEEEECCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHhcc------cC-CCCCEEEEecccCCHHHHHHHHHHHHHHHh
Confidence 345566656655 34 889999999999999999999999987776
No 78
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=24.00 E-value=36 Score=31.98 Aligned_cols=50 Identities=18% Similarity=0.065 Sum_probs=34.7
Q ss_pred eEEccCcc-cccchHHHHHhhh-ccCCCCcceEEeCCCCCCCcCCcceeeeechhhhhccC
Q 017944 280 TVLCGGTT-SMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVV 338 (363)
Q Consensus 280 Ivl~GG~s-~l~G~~~rL~~eL-~~~~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~a~l~ 338 (363)
|++.||.. .-|.|.+++++.+ ++.....++.+.. ...++.+||+++|...
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l---------~~dgs~iGAAllA~~~ 447 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRL---------SEDGSGKGAAAIAASC 447 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEE---------CTTHHHHHHHHHHTTC
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEE---------CCCccHHHHHHHHHHH
Confidence 44555543 6889999999999 6643344666652 2477889999988653
No 79
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=23.88 E-value=44 Score=29.71 Aligned_cols=64 Identities=16% Similarity=0.136 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCChhHHHHhhcCeEEccCcccccchHHHHHhhh-ccC-CCCcceEEeCCCCCCCcCCcceeeeechhhh
Q 017944 257 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLC-SSAIRPTLVKPPEYMPENLTLYSAWIGGAIL 334 (363)
Q Consensus 257 l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~l~G~~~rL~~eL-~~~-~~~~~i~v~~~~~~~~~~~~~~~~w~Gasi~ 334 (363)
|...|.+.+..+++ +.|||.||.+ +-|.+.|++.+ +.. +....+.+..... . .++.+||+.+
T Consensus 272 La~~i~~l~~~l~P-------~~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~------~-~~~~~GAa~l 335 (343)
T 2yhw_A 272 LGLGVVNILHTMNP-------SLVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDL------V-DPALLGAASM 335 (343)
T ss_dssp HHHHHHHHHHHTCC-------SEEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCC------S-CHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-------CEEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccC------C-CchHHHHHHH
Confidence 55566666666655 3588888875 56777777777 332 2111233333221 2 2356888876
Q ss_pred hc
Q 017944 335 AK 336 (363)
Q Consensus 335 a~ 336 (363)
+-
T Consensus 336 ~~ 337 (343)
T 2yhw_A 336 VL 337 (343)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 80
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=22.73 E-value=78 Score=31.28 Aligned_cols=23 Identities=17% Similarity=0.226 Sum_probs=21.5
Q ss_pred cCeEEccCcccccchHHHHHhhh
Q 017944 278 ENTVLCGGTTSMTGFEDRFQKEA 300 (363)
Q Consensus 278 ~nIvl~GG~s~l~G~~~rL~~eL 300 (363)
++|+|+||.+.-..|.++|.+.+
T Consensus 601 ~~VvLsGGV~~N~~Lre~L~~~l 623 (657)
T 3ttc_A 601 TTLVFSGGVIHNRLLRARLAHYL 623 (657)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHT
T ss_pred CEEEEECcHHHHHHHHHHHHHHh
Confidence 57999999999999999999888
No 81
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.19 E-value=27 Score=31.71 Aligned_cols=48 Identities=10% Similarity=0.035 Sum_probs=33.6
Q ss_pred cccCCCeEEEecchhhhhcc----------------C--------------C----CceEEEEecCCCceEEEEeecCee
Q 017944 112 ETFNISGFYSSEQAVLSLYA----------------V--------------G----RISGCTVDIGHGKIDIAPVIEGAV 157 (363)
Q Consensus 112 e~~~~~~v~~~~~~~~a~~~----------------~--------------g----~~tglVVDiG~~~t~v~pv~dG~~ 157 (363)
+.+++..|.+.++.-+++++ . | ..+.++|-+|.+ .-...|.+|.+
T Consensus 125 ~~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTG-iG~gii~~g~l 203 (373)
T 2q2r_A 125 ALFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTG-LGSSLIYYNPP 203 (373)
T ss_dssp TTSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSS-EEEEEEEECC-
T ss_pred HhcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCc-eeEEEEecCcc
Confidence 34777458999999998887 2 3 267899999987 45667778876
Q ss_pred ccc
Q 017944 158 QHI 160 (363)
Q Consensus 158 ~~~ 160 (363)
...
T Consensus 204 ~~G 206 (373)
T 2q2r_A 204 MNQ 206 (373)
T ss_dssp --C
T ss_pred cCC
Confidence 643
No 82
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=20.39 E-value=59 Score=33.00 Aligned_cols=45 Identities=9% Similarity=0.096 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCceEEEEcCCCC-CHHHHHHHHHHhhcccCC
Q 017944 65 WDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCS-PKAVREQLVQLMFETFNI 116 (363)
Q Consensus 65 ~~~~~~i~~~~~~~~l~~~~~~~~~v~l~~~~~~-~~~~r~~l~e~lfe~~~~ 116 (363)
-+.++.|=+|+| .. +++||||+.-... +..+..++++++-+.||=
T Consensus 385 ~~v~~~I~~~AF------~~-S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd 430 (799)
T 2zkm_X 385 KEAIEAIAESAF------KT-SPYPIILSFENHVDSPRQQAKMAEYCRTIFGD 430 (799)
T ss_dssp HHHHHHHHHHTT------SS-CCSCEEEEEEECCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhcc------cC-CCCCEEEEccccCCCHHHHHHHHHHHHHHhhh
Confidence 345555555555 34 8899999999888 899999999999877763
Done!