Query 017949
Match_columns 363
No_of_seqs 251 out of 1963
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 07:30:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 4.9E-84 1.7E-88 629.5 29.2 329 23-354 3-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 2.4E-78 8.1E-83 581.1 21.4 291 59-360 2-306 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 3.2E-76 1.1E-80 565.3 27.6 284 59-347 5-308 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 6.3E-73 2.2E-77 542.0 19.1 276 59-350 3-307 (311)
5 1odm_A Isopenicillin N synthas 100.0 1.5E-70 5.1E-75 529.9 25.1 275 59-348 7-324 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.2E-67 4E-72 498.3 23.1 258 60-347 3-276 (280)
7 3dkq_A PKHD-type hydroxylase S 94.5 0.071 2.4E-06 48.3 6.9 105 185-310 73-194 (243)
8 2rg4_A Uncharacterized protein 93.6 0.54 1.8E-05 41.5 10.8 42 260-313 167-209 (216)
9 2hbt_A EGL nine homolog 1; pro 90.9 1.1 3.7E-05 40.4 9.4 182 74-310 15-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 85.5 2.8 9.5E-05 36.8 8.2 47 261-311 170-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 85.4 2.9 9.9E-05 36.8 8.2 103 186-310 94-211 (216)
12 2iuw_A Alkylated repair protei 81.0 4.2 0.00014 36.2 7.5 86 213-310 127-229 (238)
13 3i3q_A Alpha-ketoglutarate-dep 76.5 12 0.0004 32.7 8.8 79 213-309 106-201 (211)
14 3s57_A Alpha-ketoglutarate-dep 69.8 10 0.00034 32.9 6.7 84 213-308 101-200 (204)
15 3tht_A Alkylated DNA repair pr 64.1 6.3 0.00021 37.2 4.5 105 212-326 198-327 (345)
16 2opi_A L-fuculose-1-phosphate 55.7 6.7 0.00023 34.1 2.9 36 60-95 125-160 (212)
17 2fk5_A Fuculose-1-phosphate al 50.9 11 0.00037 32.5 3.4 36 60-95 117-153 (200)
18 1pvt_A Sugar-phosphate aldolas 48.3 11 0.00039 33.2 3.2 37 59-95 160-196 (238)
19 1e4c_P L-fuculose 1-phosphate 48.1 10 0.00035 32.9 2.9 36 60-95 122-157 (215)
20 2v9l_A Rhamnulose-1-phosphate 43.0 13 0.00044 33.7 2.8 36 60-95 179-214 (274)
21 2irp_A Putative aldolase class 36.1 20 0.00068 30.8 2.8 35 60-95 139-176 (208)
22 4ay7_A Methylcobalamin\: coenz 35.7 50 0.0017 30.6 5.7 42 71-112 303-348 (348)
23 3o2g_A Gamma-butyrobetaine dio 32.2 22 0.00075 33.9 2.5 51 60-113 122-173 (388)
24 1m5a_B Insulin B chain; alpha 31.1 45 0.0015 19.6 2.8 18 72-89 9-26 (30)
25 1otj_A Alpha-ketoglutarate-dep 30.8 55 0.0019 29.2 5.0 50 59-111 16-65 (283)
26 2dbn_A Hypothetical protein YB 29.9 18 0.0006 35.4 1.4 54 58-112 98-151 (461)
27 3ocr_A Class II aldolase/adduc 29.4 32 0.0011 31.1 3.0 37 59-95 155-192 (273)
28 1e5r_A Proline oxidase; oxidor 28.8 37 0.0013 31.1 3.3 62 231-309 104-175 (290)
29 2da7_A Zinc finger homeobox pr 26.1 18 0.00063 25.8 0.6 41 168-209 15-55 (71)
30 1oih_A Putative alkylsulfatase 25.8 83 0.0029 28.3 5.3 52 59-113 26-78 (301)
31 3r1j_A Alpha-ketoglutarate-dep 25.3 87 0.003 28.5 5.3 52 59-113 20-72 (301)
32 3kt7_A PKHD-type hydroxylase T 24.3 1.3E+02 0.0045 30.5 6.6 107 185-313 104-231 (633)
33 3pvj_A Alpha-ketoglutarate-dep 23.7 80 0.0027 28.3 4.6 51 59-112 14-64 (277)
34 1y66_A Engrailed homeodomain; 21.6 55 0.0019 20.7 2.1 43 164-207 3-45 (52)
35 2x4k_A 4-oxalocrotonate tautom 21.4 80 0.0027 20.5 3.2 25 179-204 18-42 (63)
36 3m4r_A Uncharacterized protein 20.7 38 0.0013 29.5 1.8 34 61-95 156-190 (222)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.9e-84 Score=629.53 Aligned_cols=329 Identities=29% Similarity=0.564 Sum_probs=295.2
Q ss_pred CCCchHHHHhCCCCCCCCcccCCCCccccccc---cC---CCCCcceeeCCC--CC----cHHHHHHHHHHHHhcCeEEE
Q 017949 23 KGHGVKGLSEMGLKSLPKQFHQPLEERFSEKK---IL---DQVSIPLIDMSK--WE----SPEVAKSICDTAENWGFFQI 90 (363)
Q Consensus 23 ~~~~v~~l~~~~~~~~p~~y~~~~~~~~~~~~---~~---~~~~iPvIDls~--~~----~~~~~~~l~~A~~~~GFF~l 90 (363)
++++||+|+++++++||++|++|+++++.... .. ...+||||||+. .+ +.+++++|.+||++||||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 46789999999999999999999888765321 11 123699999987 22 35689999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHHHhhCCCHHHHhhhccCCCCCCcccccCCcccCccccccccccccccccccc-cccCCCCc--
Q 017949 91 VNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPINNVRYGSSFVPHVERALEWKDFLSLFYVSEE-ETSAFWPP-- 167 (363)
Q Consensus 91 ~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP~-- 167 (363)
+||||+.++++++++.+++||+||.|+|+++........++||+........+..||+|.|.+...|.. ..+|.||+
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~ 162 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 162 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence 999999999999999999999999999999987532135789987655556678899999998876654 56789997
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhc---cccccceeeccCCCCCCCCCCCcccccCCCceEEE
Q 017949 168 -VCKDEMLEYMRSSEVLIRRLMHVLVKGLNVKRIDEIREPML---LGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTIL 243 (363)
Q Consensus 168 -~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~l~~~~~---~~~~~lr~~~YPp~p~~~~~~g~~~HtD~~~lTiL 243 (363)
.||+.+++|+++|.+|+.+||++|+++|||+ +++|.+.+. ...+.||+||||||++++.++|+++|||+|+||||
T Consensus 163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLE-PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 9999999999999999999999999999999 999999887 46788999999999999999999999999999999
Q ss_pred ecCCCCCceeeeCCCCceEEecCCCCcEEEEecchhhhhcCCccccccccccCCCCCceeEEEEeecCCCCc-eEeCCcc
Q 017949 244 LQDDIGGLHVRKDNGTEWIHVAPISGSLIINVGDALQIMSNGRYKSVEHCVIANGSQNRISVPLFVNPKPEA-ILCPFPE 322 (363)
Q Consensus 244 ~qd~v~GLqV~~~g~~~W~~V~p~pg~lvVniGD~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~Pl~~ 322 (363)
+||+++||||+++| +|++|+|+||+|||||||+||+||||+|||++|||++++.++|||++||++|+.|+ +|+|+++
T Consensus 242 ~qd~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~ 319 (356)
T 1gp6_A 242 LHNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE 319 (356)
T ss_dssp EECSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred EEcCCCCeEEecCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence 99999999999999 99999999999999999999999999999999999999889999999999999999 9999999
Q ss_pred ccCCCCCCCCCCccHHHHHHHHHHccCCCCcc
Q 017949 323 VLANGEKPLYKPVLCADYSRHFYTKAHDGKKT 354 (363)
Q Consensus 323 ~v~~~~p~~y~~~~~~eyl~~~~~~~~~gk~~ 354 (363)
++++++|++|+++||+||+..++.++++|+..
T Consensus 320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 320 MVSVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp GCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred hcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 99999999999999999999999888877643
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.4e-78 Score=581.09 Aligned_cols=291 Identities=28% Similarity=0.538 Sum_probs=260.5
Q ss_pred CCcceeeCCC---CCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhCCCHHHHhhhccCCCCCCcccccC
Q 017949 59 VSIPLIDMSK---WESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPINNVRYGS 135 (363)
Q Consensus 59 ~~iPvIDls~---~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~ 135 (363)
.+||||||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-----~~Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-----SKALEG 76 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHTT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-----CCCCCc
Confidence 3699999987 35678999999999999999999999999999999999999999999999998652 348854
Q ss_pred CcccCccccccccccccccccccccccCCCCc---chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcc---
Q 017949 136 SFVPHVERALEWKDFLSLFYVSEEETSAFWPP---VCKDEMLEYMRSSEVLIRRLMHVLVKGLNVKRIDEIREPMLL--- 209 (363)
Q Consensus 136 ~~~~~~~~~~d~~e~~~~~~~p~~~~~~~wP~---~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~l~~~~~~--- 209 (363)
. ..+.+..||+|.|.+...|.. .+|.||+ .||+.+++|+++|.+|+.+||++|+++||++ +++|.+.+..
T Consensus 77 ~--~~e~~~~d~ke~~~~~~~p~~-~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 77 V--QAEVTDMDWESTFFLKHLPIS-NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLE-KGYLKNAFYGSKG 152 (319)
T ss_dssp C--CCCGGGCCCCEEEEEEEESCC-GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-TTHHHHHHHTTTC
T ss_pred c--cccCCCCChhhheeeecCCcc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhcCcCC
Confidence 3 224567899999988766543 4688997 8999999999999999999999999999999 9999998863
Q ss_pred ccccceeeccCCCCCCCCCCCcccccCCCceEEEecC-CCCCceeeeCCCCceEEecCCCCcEEEEecchhhhhcCCccc
Q 017949 210 GSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQD-DIGGLHVRKDNGTEWIHVAPISGSLIINVGDALQIMSNGRYK 288 (363)
Q Consensus 210 ~~~~lr~~~YPp~p~~~~~~g~~~HtD~~~lTiL~qd-~v~GLqV~~~g~~~W~~V~p~pg~lvVniGD~le~~TnG~~k 288 (363)
..+.+|+|||||||+|+.++|+++|||+|+||||+|| +++||||+++| +|++|+|+||++||||||+||+||||+||
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~SnG~~k 230 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPMRHSIVVNLGDQLEVITNGKYK 230 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCC--eEEEcccCCCcEEEEhHHHHHHHhCCeee
Confidence 4578999999999999999999999999999999995 79999999999 99999999999999999999999999999
Q ss_pred cccccccCCCCCceeEEEEeecCCCCceEeCCccccCCC---CCCCCCCccHHHHHHHHHHccCCCCcc-cccccc
Q 017949 289 SVEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANG---EKPLYKPVLCADYSRHFYTKAHDGKKT-IDFAKI 360 (363)
Q Consensus 289 S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~~~v~~~---~p~~y~~~~~~eyl~~~~~~~~~gk~~-~~~~~~ 360 (363)
|++|||++++.++|||++||++|+.|++|.|++++++++ +|++|+++|++||++.++++.+.||.. ++.+|+
T Consensus 231 S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 231 SVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp CCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred cccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 999999999889999999999999999999999999988 699999999999999999999988865 566665
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3.2e-76 Score=565.34 Aligned_cols=284 Identities=21% Similarity=0.360 Sum_probs=252.8
Q ss_pred CCcceeeCCC--CCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhCCCHHHHhhhccCCCCCCcccccCC
Q 017949 59 VSIPLIDMSK--WESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPINNVRYGSS 136 (363)
Q Consensus 59 ~~iPvIDls~--~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~ 136 (363)
.+||||||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ....+||...
T Consensus 5 ~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~~~Gy~~~ 82 (312)
T 3oox_A 5 SAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV--KGGARGYIPF 82 (312)
T ss_dssp CSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS--GGGTSEEECC
T ss_pred CCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC--CCCccccccc
Confidence 5799999986 35778999999999999999999999999999999999999999999999999874 2457899543
Q ss_pred ccc--Ccccccccccccccccc-cc----c--cccCCCCc---chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhh
Q 017949 137 FVP--HVERALEWKDFLSLFYV-SE----E--ETSAFWPP---VCKDEMLEYMRSSEVLIRRLMHVLVKGLNVKRIDEIR 204 (363)
Q Consensus 137 ~~~--~~~~~~d~~e~~~~~~~-p~----~--~~~~~wP~---~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~l~ 204 (363)
... ......||+|.|.+... +. . ..+|.||+ .||+++++|+++|.+|+.+||++|+++||++ +++|.
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~ 161 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE-RDFFK 161 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTTTH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-HHHHH
Confidence 221 12356899999877531 11 1 23689997 8999999999999999999999999999999 99999
Q ss_pred hhhccccccceeeccCCCCCCCCCCCcccccCCCceEEEecCCCCCceee-eCCCCceEEecCCCCcEEEEecchhhhhc
Q 017949 205 EPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVR-KDNGTEWIHVAPISGSLIINVGDALQIMS 283 (363)
Q Consensus 205 ~~~~~~~~~lr~~~YPp~p~~~~~~g~~~HtD~~~lTiL~qd~v~GLqV~-~~g~~~W~~V~p~pg~lvVniGD~le~~T 283 (363)
+.+..+.+.+|+||||||+.++..+|+++|||+|+||||+||+++||||+ ++| +|++|+|+||++||||||+||+||
T Consensus 162 ~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g--~W~~V~p~pg~~vVNiGD~l~~~T 239 (312)
T 3oox_A 162 PTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDG--QWLPINPPPGCLVINIGDMLERLT 239 (312)
T ss_dssp HHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTS--CEEECCCCSSCEEEEECHHHHHHT
T ss_pred HHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCC--cEEECCCCCCeEEEEhHHHHHHHh
Confidence 99988888999999999998766699999999999999999999999997 789 999999999999999999999999
Q ss_pred CCccccccccccCCC----CCceeEEEEeecCCCCceEeCCccccCCCCCCCCC-CccHHHHHHHHHHc
Q 017949 284 NGRYKSVEHCVIANG----SQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYK-PVLCADYSRHFYTK 347 (363)
Q Consensus 284 nG~~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~Pl~~~v~~~~p~~y~-~~~~~eyl~~~~~~ 347 (363)
||+|||++|||+.++ ..+|||++||++|+.|++|+|+++++++++|++|+ ++|++||+..+++.
T Consensus 240 nG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 240 NNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp TTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred CCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 999999999998753 45799999999999999999999999999999999 99999999999874
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=6.3e-73 Score=541.97 Aligned_cols=276 Identities=14% Similarity=0.240 Sum_probs=234.8
Q ss_pred CCcceeeCCC--CCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhCCC-HHHHhhhccCCCCCCcccccC
Q 017949 59 VSIPLIDMSK--WESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFALP-AEEKRKYSKENSPINNVRYGS 135 (363)
Q Consensus 59 ~~iPvIDls~--~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~lP-~eeK~~~~~~~~~~~~~Gy~~ 135 (363)
.+||||||+. .++.. ++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++..... ...+||+.
T Consensus 3 ~~iPvIDls~l~~~~~~--~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~-~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ--DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVP-TMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH--HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSC-CSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH--HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCC-CCCCceee
Confidence 4699999986 22222 399999999999999999999999999999999999999 999999987543 45789975
Q ss_pred Cccc------CccccccccccccccccccccccCCCCc-chHHHHHHHHHHHHHHHHHHHHHHHHhcCC----Cchhhhh
Q 017949 136 SFVP------HVERALEWKDFLSLFYVSEEETSAFWPP-VCKDEMLEYMRSSEVLIRRLMHVLVKGLNV----KRIDEIR 204 (363)
Q Consensus 136 ~~~~------~~~~~~d~~e~~~~~~~p~~~~~~~wP~-~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl----~~~~~l~ 204 (363)
.... ...+..||+|.|.+... +|.||. .||+.+++|+++|.+|+.+||++|+++||+ + +++|.
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~-~~~f~ 153 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTA-----DNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGG-VEAFL 153 (311)
T ss_dssp C-----------------CEEEEECSS-----SCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTC-HHHHH
T ss_pred ccccccccccCCCCCCCcceeeeccCC-----CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCc-HhHHh
Confidence 4332 23467899999988753 578986 999999999999999999999999999999 8 88887
Q ss_pred hhhccccccceeeccCCCCCCC--C--CCCcccccCCCceEEEecC-CCCC---ceeeeCCCCceEEecCCCCcEEEEec
Q 017949 205 EPMLLGSRRVNLNYYPMCPNPE--L--TVGVGRHSDISTFTILLQD-DIGG---LHVRKDNGTEWIHVAPISGSLIINVG 276 (363)
Q Consensus 205 ~~~~~~~~~lr~~~YPp~p~~~--~--~~g~~~HtD~~~lTiL~qd-~v~G---LqV~~~g~~~W~~V~p~pg~lvVniG 276 (363)
+. .+.+|+||||||++++ . .+|+++|||+|+||||+|| +++| |||+++| +|++|+|+||++|||||
T Consensus 154 ~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g--~W~~V~p~pg~lvVNiG 227 (311)
T 1dcs_A 154 DC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGG--AFTDLPYRPDAVLVFCG 227 (311)
T ss_dssp SC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETT--EEEECCCCTTCEEEEEC
T ss_pred hc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCC--EEEeCcCCCCeEEEEHH
Confidence 65 6789999999999874 3 6789999999999999999 8999 9999999 99999999999999999
Q ss_pred chhhhhcCCccccccccccCCC-----CCceeEEEEeecCCCCceEeCCccccCCCCCCCC--CCccHHHHHHHHHHccC
Q 017949 277 DALQIMSNGRYKSVEHCVIANG-----SQNRISVPLFVNPKPEAILCPFPEVLANGEKPLY--KPVLCADYSRHFYTKAH 349 (363)
Q Consensus 277 D~le~~TnG~~kS~~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~Pl~~~v~~~~p~~y--~~~~~~eyl~~~~~~~~ 349 (363)
|+||+||||+|||++|||++++ .++|||++||++|+.|++|. +++++++++|++| +++|++||+..++++.+
T Consensus 228 D~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 228 AIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9999999999999999999987 67999999999999999999 9999999999999 99999999998876655
Q ss_pred C
Q 017949 350 D 350 (363)
Q Consensus 350 ~ 350 (363)
.
T Consensus 307 ~ 307 (311)
T 1dcs_A 307 R 307 (311)
T ss_dssp C
T ss_pred c
Confidence 3
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.5e-70 Score=529.94 Aligned_cols=275 Identities=23% Similarity=0.305 Sum_probs=244.3
Q ss_pred CCcceeeCCC--C----CcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHh-hCCCHHHHhhhccCCCCCCcc
Q 017949 59 VSIPLIDMSK--W----ESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRF-FALPAEEKRKYSKENSPINNV 131 (363)
Q Consensus 59 ~~iPvIDls~--~----~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~F-F~lP~eeK~~~~~~~~~~~~~ 131 (363)
.+||||||+. . .+.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-------~ 76 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-------R 76 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-------T
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-------c
Confidence 4699999986 2 24568999999999999999999999 999999999999 9999999999965 4
Q ss_pred cccCCcc--cCc------ccccccccccccccccc-----------ccccCCCCc-----chHHHHHHHHHHHHHHHHHH
Q 017949 132 RYGSSFV--PHV------ERALEWKDFLSLFYVSE-----------EETSAFWPP-----VCKDEMLEYMRSSEVLIRRL 187 (363)
Q Consensus 132 Gy~~~~~--~~~------~~~~d~~e~~~~~~~p~-----------~~~~~~wP~-----~fr~~~~~y~~~~~~la~~l 187 (363)
||..... ... .+..||+|.|.+...+. ...+|.||+ +||+++++|+++|.+|+.+|
T Consensus 77 Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~l 156 (331)
T 1odm_A 77 AYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSAL 156 (331)
T ss_dssp TTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 5532211 111 25789999998875321 023689996 79999999999999999999
Q ss_pred HHHHHHhcCCCchhhhhhhhccccccce--eeccC------C---CCCCCC-CCCcccccCCCceEEEecCCCCCceeee
Q 017949 188 MHVLVKGLNVKRIDEIREPMLLGSRRVN--LNYYP------M---CPNPEL-TVGVGRHSDISTFTILLQDDIGGLHVRK 255 (363)
Q Consensus 188 l~~ls~~Lgl~~~~~l~~~~~~~~~~lr--~~~YP------p---~p~~~~-~~g~~~HtD~~~lTiL~qd~v~GLqV~~ 255 (363)
|++|+++|||+ +++|.+.+..+.+.+| +|||| | |++|+. .+|+++|||+|+||||+||+++||||+.
T Consensus 157 l~~la~~Lgl~-~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 157 LKGYALALGKE-ENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHHHTTSC-TTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHHHhCCC-HHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 99999999999 9999999988888999 99999 8 998887 8999999999999999999999999995
Q ss_pred CCCCceEEecCCCCcEEEEecchhhhhcCCccccccccccCCCCCceeEEEEeecCCCCceEeCCccccCCCCCCCCCCc
Q 017949 256 DNGTEWIHVAPISGSLIINVGDALQIMSNGRYKSVEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPV 335 (363)
Q Consensus 256 ~g~~~W~~V~p~pg~lvVniGD~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~~~v~~~~p~~y~~~ 335 (363)
.+ .|++|+|+||++||||||+||+||||+|||++|||+. +.++|||++||++|+.|++|.|+++++++++ ++|+++
T Consensus 236 ~~--gWi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~ 311 (331)
T 1odm_A 236 AA--GYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPL 311 (331)
T ss_dssp TT--EEEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCC
T ss_pred CC--CeEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCc
Confidence 55 4999999999999999999999999999999999985 5789999999999999999999999999888 899999
Q ss_pred cHHHHHHHHHHcc
Q 017949 336 LCADYSRHFYTKA 348 (363)
Q Consensus 336 ~~~eyl~~~~~~~ 348 (363)
|++||++.++++.
T Consensus 312 t~~e~l~~~~~~~ 324 (331)
T 1odm_A 312 SYGDYLQNGLVSL 324 (331)
T ss_dssp BHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999999998765
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.2e-67 Score=498.29 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=220.7
Q ss_pred CcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhCCCHHHHhhhccCCCCCCcccccCCc-c
Q 017949 60 SIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPINNVRYGSSF-V 138 (363)
Q Consensus 60 ~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~-~ 138 (363)
+||||||+.. +++++|.+||++||||||+|||||.++++++++.+++||+| |+|+++... +...+||+... .
T Consensus 3 ~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~--~~~~~GY~~~~~~ 75 (280)
T 3on7_A 3 KLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFN--RETHDGFFPASIS 75 (280)
T ss_dssp -CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCC--TTTCCEEECCC--
T ss_pred CCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccC--CCCCCccccCccc
Confidence 6999999862 46899999999999999999999999999999999999998 799999764 34578996542 1
Q ss_pred c--CccccccccccccccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch--hh---hhhhhcccc
Q 017949 139 P--HVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIRRLMHVLVKGLNVKRI--DE---IREPMLLGS 211 (363)
Q Consensus 139 ~--~~~~~~d~~e~~~~~~~p~~~~~~~wP~~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~--~~---l~~~~~~~~ 211 (363)
. ......||+|+|.+. |. ..||..||+++++|+++|.+|+.+||++|+++||++ . ++ |.+.+....
T Consensus 76 e~~~~~~~~D~kE~~~~~--p~----~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~~~~~~~~~~~~~~~ 148 (280)
T 3on7_A 76 ETAKGHTVKDIKEYYHVY--PW----GRIPDSLRANILAYYEKANTLASELLEWIETYSPDE-IKAKFSIPLPEMIANSH 148 (280)
T ss_dssp ------CCCCSCEEEEEC--TT----SCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHH-HHTTCSSCHHHHHTTCS
T ss_pred cccCCCCcccHHHHHhcC--CC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhHHHHHHhcCCc
Confidence 1 123467999998663 21 234569999999999999999999999999999976 3 22 455555443
Q ss_pred -ccceeeccCCCCCCC--CCCCcccccCCCceEEEecCCCCCceee-eCCCCceEEecCCCCcEEEEecchhhhhcCCcc
Q 017949 212 -RRVNLNYYPMCPNPE--LTVGVGRHSDISTFTILLQDDIGGLHVR-KDNGTEWIHVAPISGSLIINVGDALQIMSNGRY 287 (363)
Q Consensus 212 -~~lr~~~YPp~p~~~--~~~g~~~HtD~~~lTiL~qd~v~GLqV~-~~g~~~W~~V~p~pg~lvVniGD~le~~TnG~~ 287 (363)
+.+|+||||||+.++ .++|+++|||+|+||||+||+++||||+ ++| +|++|+|+||++||||||+||+||||+|
T Consensus 149 ~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g--~W~~V~p~pg~~vVNiGD~l~~~Tng~~ 226 (280)
T 3on7_A 149 KTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDG--SWLDVPSDFGNIIINIGDMLQEASDGYF 226 (280)
T ss_dssp SCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTS--CEEECCCCTTCEEEEECHHHHHHTTTSS
T ss_pred cceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCC--CEEECcCCCCEEEEEcChHHHHHhCCcc
Confidence 789999999999865 5799999999999999999999999999 789 9999999999999999999999999999
Q ss_pred ccccccccCCC----CCceeEEEEeecCCCCceEeCCccccCCCCCCCCCCccHHHHHHHHHHc
Q 017949 288 KSVEHCVIANG----SQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLCADYSRHFYTK 347 (363)
Q Consensus 288 kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~Pl~~~v~~~~p~~y~~~~~~eyl~~~~~~ 347 (363)
||++|||+.++ ..+|||++||++|+.|++|.| ++|++||+..+++.
T Consensus 227 kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 227 PSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp CCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred cCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999998863 458999999999999999985 59999999999875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.49 E-value=0.071 Score=48.26 Aligned_cols=105 Identities=19% Similarity=0.186 Sum_probs=63.1
Q ss_pred HHHHHHHHHhcCCCchhhhhhhhccccccceeeccCCCCCCCCCCCcccccCCC-----------ceEEEec--C--C-C
Q 017949 185 RRLMHVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDIS-----------TFTILLQ--D--D-I 248 (363)
Q Consensus 185 ~~ll~~ls~~Lgl~~~~~l~~~~~~~~~~lr~~~YPp~p~~~~~~g~~~HtD~~-----------~lTiL~q--d--~-v 248 (363)
.+|.+.|...|+.. ..++...+.....-++++.|.+-.. ..+|.|.. .+|+++. | . .
T Consensus 73 ~~l~~~i~~~l~~~-~~f~~~~L~~~~e~~~~~rY~~G~~------y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~ 145 (243)
T 3dkq_A 73 VALGQQIMDRLLAH-PQFVSAALPLQFYPPLFNRYQGGET------FGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQ 145 (243)
T ss_dssp HHHHHHHHHHHHTC-HHHHHHHCEEEEEEEEEEEECTTCE------EEEECBCSEEEETTEEEECCEEEEEECSCGGGEE
T ss_pred HHHHHHHHHHHccC-cchhhcccccccccceEEEECCCCe------eccCCCCCCCCCCCccccceEEEEEEeCCCCCCC
Confidence 33444444455554 4333222222234577888877321 45677653 4666654 3 1 2
Q ss_pred CC-ceeeeCCCCceEEecCCCCcEEEEecchhhhhcCCccccccccccCCCCCceeEEEEeec
Q 017949 249 GG-LHVRKDNGTEWIHVAPISGSLIINVGDALQIMSNGRYKSVEHCVIANGSQNRISVPLFVN 310 (363)
Q Consensus 249 ~G-LqV~~~g~~~W~~V~p~pg~lvVniGD~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~ 310 (363)
|| |.+.... .=..|+|..|.+|+.-. ..+|+|..-....|+++..+++
T Consensus 146 GGetvf~~~~--~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 146 GGELVIQDTY--GQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ECCEEEEETT--EEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred CceEEEeeCC--CcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 34 5555443 34789999999999753 3689998655568999998875
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.61 E-value=0.54 Score=41.52 Aligned_cols=42 Identities=26% Similarity=0.229 Sum_probs=34.3
Q ss_pred ceEEecCCCCcEEEEecchhhhhcCCccccccccccCCCC-CceeEEEEeecCCC
Q 017949 260 EWIHVAPISGSLIINVGDALQIMSNGRYKSVEHCVIANGS-QNRISVPLFVNPKP 313 (363)
Q Consensus 260 ~W~~V~p~pg~lvVniGD~le~~TnG~~kS~~HRVv~~~~-~~R~Si~~F~~P~~ 313 (363)
.+..|+|.+|.+||.-+.+ .|.|..+.. .+|+||+|.+.+..
T Consensus 167 ~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 167 TFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 6779999999999998753 799998654 58999999998764
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=90.92 E-value=1.1 Score=40.37 Aligned_cols=182 Identities=15% Similarity=0.177 Sum_probs=98.6
Q ss_pred HHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhCCCHHHHhhhccCCCCCCcccccCCcccCc---ccccccccc
Q 017949 74 VAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPINNVRYGSSFVPHV---ERALEWKDF 150 (363)
Q Consensus 74 ~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~---~~~~d~~e~ 150 (363)
..+.+..++.+.|++++.|- ++++.++.+.+.++.+- +.-.+.. . ..|-. ...... .....|.+.
T Consensus 15 ~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~-----~~g~~~~----a-~i~~~-~~~~~~~iR~d~i~wl~~ 82 (247)
T 2hbt_A 15 ALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALH-----DTGKFTD----G-QLVSQ-KSDSSKDIRGDKITWIEG 82 (247)
T ss_dssp HHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHH-----HTTCSCS----C-CEEEC-CSSSTTCEECCEEEEECS
T ss_pred hHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhh-----hcCCccc----c-ccccc-cccccccccccceeeecc
Confidence 45678899999999875554 89999999998887742 0001111 1 11100 000000 001111111
Q ss_pred ccccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccceeeccCCCCCCCCCCC
Q 017949 151 LSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIRRLMHVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVG 230 (363)
Q Consensus 151 ~~~~~~p~~~~~~~wP~~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~l~~~~~~~~~~lr~~~YPp~p~~~~~~g 230 (363)
. . ...+.+..|.+.|.++.. .+...||+. . .. ...-+.+.+|++. .-.
T Consensus 83 -------~-----~---~~~~~~~~l~~~i~~l~~----~ln~~lGl~-~------i~-~~~e~~~~~Y~~~-----G~~ 130 (247)
T 2hbt_A 83 -------K-----E---PGCETIGLLMSSMDDLIR----HCNGKLGSY-K------IN-GRTKAMVACYPGN-----GTG 130 (247)
T ss_dssp -------C-----S---TTCHHHHHHHHHHHHHHH----HTTTTSTTC-C------EE-EECCEEEEEECSS-----SCC
T ss_pred -------c-----c---cchhHHHHHHHHHHHHHH----HHhhhcCcc-c------cc-ccceEEEEEecCC-----CCc
Confidence 0 0 011223345555544433 233334443 1 00 1123567788751 123
Q ss_pred cccccCCC-----ceEEEec--C-C----CCC-ceeeeCCCCceEEecCCCCcEEEEecchhhhhcCCccccccccccCC
Q 017949 231 VGRHSDIS-----TFTILLQ--D-D----IGG-LHVRKDNGTEWIHVAPISGSLIINVGDALQIMSNGRYKSVEHCVIAN 297 (363)
Q Consensus 231 ~~~HtD~~-----~lTiL~q--d-~----v~G-LqV~~~g~~~W~~V~p~pg~lvVniGD~le~~TnG~~kS~~HRVv~~ 297 (363)
..+|.|.. .+|+++. + . -|| |.++.++......|.|..|.+|+.-.+. -.+|.|..
T Consensus 131 y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p- 199 (247)
T 2hbt_A 131 YVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP- 199 (247)
T ss_dssp EEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-
T ss_pred ccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-
Confidence 56777762 6888875 2 1 144 6777443225789999999999987642 15899876
Q ss_pred CCCceeEEEEeec
Q 017949 298 GSQNRISVPLFVN 310 (363)
Q Consensus 298 ~~~~R~Si~~F~~ 310 (363)
..+.|+||+..+.
T Consensus 200 ~~~~R~sit~W~~ 212 (247)
T 2hbt_A 200 AYATRYAITVWYF 212 (247)
T ss_dssp BSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEEc
Confidence 4579999988764
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.51 E-value=2.8 Score=36.79 Aligned_cols=47 Identities=15% Similarity=0.234 Sum_probs=34.5
Q ss_pred eEEecCCCCcEEEEecchhhhhcCCcc-ccccccccCCCCCceeEEEEeecC
Q 017949 261 WIHVAPISGSLIINVGDALQIMSNGRY-KSVEHCVIANGSQNRISVPLFVNP 311 (363)
Q Consensus 261 W~~V~p~pg~lvVniGD~le~~TnG~~-kS~~HRVv~~~~~~R~Si~~F~~P 311 (363)
-+.|+|..|.+|+.-- ...||.. ..++|+|..-....|+++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4899999999998754 1223433 678999986555689999988764
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.45 E-value=2.9 Score=36.81 Aligned_cols=103 Identities=14% Similarity=0.099 Sum_probs=62.4
Q ss_pred HHHHHHHHhcCCCchhhhhhhhccccccceeeccCCCCCCCCCCCcccccCCC-----------ceEEEec--C-CCCCc
Q 017949 186 RLMHVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDIS-----------TFTILLQ--D-DIGGL 251 (363)
Q Consensus 186 ~ll~~ls~~Lgl~~~~~l~~~~~~~~~~lr~~~YPp~p~~~~~~g~~~HtD~~-----------~lTiL~q--d-~v~GL 251 (363)
+|.+.|+..+|++ .+. .-.+++..|.+... ..+|.|.. .+|+++. | ..||=
T Consensus 94 ~i~~Ri~~~~gl~-~~~--------~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGe 158 (216)
T 3itq_A 94 KIEKRISSIMNVP-ASH--------GEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGE 158 (216)
T ss_dssp HHHHHHHHHHTSC-GGG--------BCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECC
T ss_pred HHHHHHHHhcCce-ecc--------ccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCce
Confidence 4444555557887 321 23466777765322 45666653 4788875 2 23454
Q ss_pred eeeeCCCCceEEecCCCCcEEEEecchhhhhcCCc-cccccccccCCCCCceeEEEEeec
Q 017949 252 HVRKDNGTEWIHVAPISGSLIINVGDALQIMSNGR-YKSVEHCVIANGSQNRISVPLFVN 310 (363)
Q Consensus 252 qV~~~g~~~W~~V~p~pg~lvVniGD~le~~TnG~-~kS~~HRVv~~~~~~R~Si~~F~~ 310 (363)
-+..+. =+.|+|..|.+|+.-.- ..||. -..++|++..-....|+++..+++
T Consensus 159 T~Fp~~---~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 159 TFFPKL---NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EEETTT---TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred eEecCC---CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 444332 27899999999887641 12332 246899998655568999988875
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=80.95 E-value=4.2 Score=36.22 Aligned_cols=86 Identities=17% Similarity=0.163 Sum_probs=54.1
Q ss_pred cceeeccCCCCCCCCCCCcccccCC--------CceEEEecCCCCCceeeeCCC---------CceEEecCCCCcEEEEe
Q 017949 213 RVNLNYYPMCPNPELTVGVGRHSDI--------STFTILLQDDIGGLHVRKDNG---------TEWIHVAPISGSLIINV 275 (363)
Q Consensus 213 ~lr~~~YPp~p~~~~~~g~~~HtD~--------~~lTiL~qd~v~GLqV~~~g~---------~~W~~V~p~pg~lvVni 275 (363)
.+.+|+|++-. -++++|.|- ...||-+-.. .=+.+.+... ...+.+.-.+|.++|.-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 45689998732 258889884 2334433211 1133332110 26899999999999999
Q ss_pred cchhhhhcCCccccccccccCCCCCceeEEEEeec
Q 017949 276 GDALQIMSNGRYKSVEHCVIANGSQNRISVPLFVN 310 (363)
Q Consensus 276 GD~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~ 310 (363)
|+.=..|..|.-+.. .....|+|+.|=..
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998777776654421 13468999988653
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=76.46 E-value=12 Score=32.73 Aligned_cols=79 Identities=11% Similarity=0.150 Sum_probs=49.5
Q ss_pred cceeeccCCCCCCCCCCCcccccCC-----C--ceEEEecCCCCCceeee---CCCCceEEecCCCCcEEEEecchhhhh
Q 017949 213 RVNLNYYPMCPNPELTVGVGRHSDI-----S--TFTILLQDDIGGLHVRK---DNGTEWIHVAPISGSLIINVGDALQIM 282 (363)
Q Consensus 213 ~lr~~~YPp~p~~~~~~g~~~HtD~-----~--~lTiL~qd~v~GLqV~~---~g~~~W~~V~p~pg~lvVniGD~le~~ 282 (363)
.+-+|+|.+- . ++++|.|- + .+||-+-.. .-+.+.+ .+ ..+.+.-.+|+++|.-|+. +.|
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~~~--~~~~i~L~~GsllvM~G~~-r~~ 175 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKRND--PLKRLLLEHGDVVVWGGES-RLF 175 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSSTTS--CCEEEEECTTCEEEECGGG-TTC
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCCC-eEEEEecccCCC--ceEEEECCCCCEEEECchH-Hce
Confidence 4668999872 3 78999992 2 334433211 2233332 24 7889999999999998886 223
Q ss_pred cCCccccccccccCCCC-------CceeEEEEee
Q 017949 283 SNGRYKSVEHCVIANGS-------QNRISVPLFV 309 (363)
Q Consensus 283 TnG~~kS~~HRVv~~~~-------~~R~Si~~F~ 309 (363)
.|.|..... ..|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 366554322 3699998864
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=69.76 E-value=10 Score=32.89 Aligned_cols=84 Identities=12% Similarity=0.066 Sum_probs=49.9
Q ss_pred cceeeccCCCCCCCCCCCcccccCCC--------ceEEEecCCCCCceeeeCC--------CCceEEecCCCCcEEEEec
Q 017949 213 RVNLNYYPMCPNPELTVGVGRHSDIS--------TFTILLQDDIGGLHVRKDN--------GTEWIHVAPISGSLIINVG 276 (363)
Q Consensus 213 ~lr~~~YPp~p~~~~~~g~~~HtD~~--------~lTiL~qd~v~GLqV~~~g--------~~~W~~V~p~pg~lvVniG 276 (363)
.+-+|+|.+-. -++++|.|-. ..+|-+-.. .=+.+.+.. ....+.+.-.+|.++|.-|
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~~-~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGAS-RDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEESC-EEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECCCc-eEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 45689998732 2578888862 223333111 123333210 0157888889999999999
Q ss_pred chhhhhcCCccccccccccCCCCCceeEEEEe
Q 017949 277 DALQIMSNGRYKSVEHCVIANGSQNRISVPLF 308 (363)
Q Consensus 277 D~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F 308 (363)
+.=..|..|.-+.. .....|+|+.|=
T Consensus 175 ~~q~~w~H~Ip~~~------~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWYHSLPVRK------KVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEEEEECCCT------TCCSCEEEEEEE
T ss_pred hhhheeEeeccccC------CCCCCEEEEEee
Confidence 87766764443211 123579999874
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=64.06 E-value=6.3 Score=37.24 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=64.7
Q ss_pred ccceeeccCCCCCCCCCCCcccccCCC------ceEEEecCCCCCceee-eCCCCceEEecCCCCcEEEEecchhhhhcC
Q 017949 212 RRVNLNYYPMCPNPELTVGVGRHSDIS------TFTILLQDDIGGLHVR-KDNGTEWIHVAPISGSLIINVGDALQIMSN 284 (363)
Q Consensus 212 ~~lr~~~YPp~p~~~~~~g~~~HtD~~------~lTiL~qd~v~GLqV~-~~g~~~W~~V~p~pg~lvVniGD~le~~Tn 284 (363)
..+-+|+|.+- -++++|.|-. ..||-+-. ..-+.+. +++ .++.+.-.+|+++|.-|+.=..|..
T Consensus 198 n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~~--~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 198 DQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPDG--IAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp SEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEESS-CEEEEEECTTS--CEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CEEEEEEecCC------CCEeeccCCchhcCCeEEEEECCC-ceeEEEccCCC--ceEEEEcCCCcEEEEChHHhhceEc
Confidence 34668999772 2789999984 33443311 1224444 346 7999999999999999999888877
Q ss_pred CccccccccccC------------------CCCCceeEEEEeecCCCCceEeCCccccCC
Q 017949 285 GRYKSVEHCVIA------------------NGSQNRISVPLFVNPKPEAILCPFPEVLAN 326 (363)
Q Consensus 285 G~~kS~~HRVv~------------------~~~~~R~Si~~F~~P~~d~~i~Pl~~~v~~ 326 (363)
|.-+-...-+-. .....|+|+.|=.-+..... ...|+++|.
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~-C~~~~~cd~ 327 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCN-CSYPLVCDS 327 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCC-CSCTTTCTT
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcC-CCCCCcccC
Confidence 665543332210 01346999988765554221 223445543
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=55.73 E-value=6.7 Score=34.10 Aligned_cols=36 Identities=31% Similarity=0.467 Sum_probs=31.2
Q ss_pred CcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCC
Q 017949 60 SIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGV 95 (363)
Q Consensus 60 ~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv 95 (363)
.||++++...+..+.++.+.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999876566788999999999888999999996
No 17
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=50.88 E-value=11 Score=32.50 Aligned_cols=36 Identities=17% Similarity=0.293 Sum_probs=30.9
Q ss_pred Cccee-eCCCCCcHHHHHHHHHHHHhcCeEEEecCCC
Q 017949 60 SIPLI-DMSKWESPEVAKSICDTAENWGFFQIVNHGV 95 (363)
Q Consensus 60 ~iPvI-Dls~~~~~~~~~~l~~A~~~~GFF~l~nHGv 95 (363)
.||++ ++...+..+.++.+.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 7766566788999999999988999999996
No 18
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=48.27 E-value=11 Score=33.19 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=31.7
Q ss_pred CCcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCC
Q 017949 59 VSIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGV 95 (363)
Q Consensus 59 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv 95 (363)
..||++++...+..+.++.+.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 4699999976566788999999999888999999997
No 19
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=48.12 E-value=10 Score=32.92 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=30.7
Q ss_pred CcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCC
Q 017949 60 SIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGV 95 (363)
Q Consensus 60 ~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv 95 (363)
.||++++...+..+.++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 689999876556688899999998888899999996
No 20
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=43.01 E-value=13 Score=33.69 Aligned_cols=36 Identities=8% Similarity=0.148 Sum_probs=31.4
Q ss_pred CcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCC
Q 017949 60 SIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGV 95 (363)
Q Consensus 60 ~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv 95 (363)
.||++++...+..+.++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 689998876566788999999999999999999996
No 21
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=36.09 E-value=20 Score=30.82 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=28.4
Q ss_pred CcceeeCCCCCcHHHHHHHHHHHHhcC---eEEEecCCC
Q 017949 60 SIPLIDMSKWESPEVAKSICDTAENWG---FFQIVNHGV 95 (363)
Q Consensus 60 ~iPvIDls~~~~~~~~~~l~~A~~~~G---FF~l~nHGv 95 (363)
.||+++.. ++..+.++.+.+++.+.+ .+.+.|||+
T Consensus 139 ~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 68888875 455678889999998875 788999996
No 22
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=35.74 E-value=50 Score=30.60 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHHHhcCeEEEecCCCC----HHHHHHHHHHHHHhhC
Q 017949 71 SPEVAKSICDTAENWGFFQIVNHGVP----LEVLERVKEATHRFFA 112 (363)
Q Consensus 71 ~~~~~~~l~~A~~~~GFF~l~nHGv~----~~l~~~~~~~~~~FF~ 112 (363)
.+++.+++.+.++.-||..=.+|||+ .+-++.+.+++++||+
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 45666777788888888766789975 5789999999999985
No 23
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=32.15 E-value=22 Score=33.85 Aligned_cols=51 Identities=18% Similarity=0.183 Sum_probs=39.3
Q ss_pred CcceeeCCC-CCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhCC
Q 017949 60 SIPLIDMSK-WESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFAL 113 (363)
Q Consensus 60 ~iPvIDls~-~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~l 113 (363)
++|.||++. -.+.+.+.++.+|+.++|+..+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999976 234678899999999999999999888754 444566676544
No 24
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=31.14 E-value=45 Score=19.60 Aligned_cols=18 Identities=17% Similarity=0.394 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhcCeEE
Q 017949 72 PEVAKSICDTAENWGFFQ 89 (363)
Q Consensus 72 ~~~~~~l~~A~~~~GFF~ 89 (363)
.+.++.|.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 578899999999999997
No 25
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=30.85 E-value=55 Score=29.16 Aligned_cols=50 Identities=10% Similarity=0.117 Sum_probs=37.8
Q ss_pred CCcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhh
Q 017949 59 VSIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFF 111 (363)
Q Consensus 59 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF 111 (363)
.+|+-||++..-..+..++|.+++.++|+..+.+-.++.+ +..+.++.|=
T Consensus 16 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 4678889886334567999999999999999999888764 3445556654
No 26
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=29.92 E-value=18 Score=35.41 Aligned_cols=54 Identities=13% Similarity=0.194 Sum_probs=39.5
Q ss_pred CCCcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhC
Q 017949 58 QVSIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFA 112 (363)
Q Consensus 58 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~ 112 (363)
..-||.||+++-....+.++..+.+++.|++.|.|. ||.+...+..+.+.+|.+
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 356999999750011123556678899999988887 899888888888888763
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=29.41 E-value=32 Score=31.14 Aligned_cols=37 Identities=8% Similarity=0.069 Sum_probs=30.8
Q ss_pred CCcceeeCCCC-CcHHHHHHHHHHHHhcCeEEEecCCC
Q 017949 59 VSIPLIDMSKW-ESPEVAKSICDTAENWGFFQIVNHGV 95 (363)
Q Consensus 59 ~~iPvIDls~~-~~~~~~~~l~~A~~~~GFF~l~nHGv 95 (363)
..||++|+... ...++.+.|.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 36888888763 36678899999999999999999996
No 28
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=28.85 E-value=37 Score=31.12 Aligned_cols=62 Identities=19% Similarity=0.277 Sum_probs=37.2
Q ss_pred cccccCCC--------ceEEEec-CCCCCceeeeCCCCceEEecCCCCc-EEEEecchhhhhcCCccccccccccCCCCC
Q 017949 231 VGRHSDIS--------TFTILLQ-DDIGGLHVRKDNGTEWIHVAPISGS-LIINVGDALQIMSNGRYKSVEHCVIANGSQ 300 (363)
Q Consensus 231 ~~~HtD~~--------~lTiL~q-d~v~GLqV~~~g~~~W~~V~p~pg~-lvVniGD~le~~TnG~~kS~~HRVv~~~~~ 300 (363)
+.+|.|+. .+-+.+. ...+|..+.-+| +-+..++ |. .++| -+..|.|.++++.
T Consensus 104 I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg--~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 104 VIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNED--TVIHMRP--GEIWFLD-------------AATVHSAVNFSEI 166 (290)
T ss_dssp EEEECCC--------CBCCEEEECSCCTTEEEEETT--EEECCCT--TEEEECC-------------TTSCEEEEESSSS
T ss_pred eeCccCccccccccCCceEEEeeEecCCCcEEEECC--EEEecCC--CCEEEEc-------------CCCeeEEEcCCCC
Confidence 67888882 2333322 123666666666 4444443 33 2222 2458999999999
Q ss_pred ceeEEEEee
Q 017949 301 NRISVPLFV 309 (363)
Q Consensus 301 ~R~Si~~F~ 309 (363)
+|+.+.+=+
T Consensus 167 ~RIhLv~D~ 175 (290)
T 1e5r_A 167 SRQSLCVDF 175 (290)
T ss_dssp CCCEEEEEE
T ss_pred CeEEEEEEe
Confidence 999988765
No 29
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.06 E-value=18 Score=25.82 Aligned_cols=41 Identities=5% Similarity=-0.085 Sum_probs=34.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcc
Q 017949 168 VCKDEMLEYMRSSEVLIRRLMHVLVKGLNVKRIDEIREPMLL 209 (363)
Q Consensus 168 ~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~l~~~~~~ 209 (363)
+-+..++.|+..-.+-...-+..||+.+||+ .+.+.-.|..
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~-~~VVrVWFqN 55 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLP-QEFVKEWFEQ 55 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC-HHHHHHHHhh
Confidence 4467888888888888888899999999999 8888777754
No 30
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=25.80 E-value=83 Score=28.29 Aligned_cols=52 Identities=6% Similarity=-0.086 Sum_probs=39.2
Q ss_pred CCcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCC-CCHHHHHHHHHHHHHhhCC
Q 017949 59 VSIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHG-VPLEVLERVKEATHRFFAL 113 (363)
Q Consensus 59 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHG-v~~~l~~~~~~~~~~FF~l 113 (363)
.+|+-||++..-..+..++|.+++.++|+..+.+-. ++. ++..+.++.|=.+
T Consensus 26 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 467778887633456789999999999999999987 875 4555666676543
No 31
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=25.27 E-value=87 Score=28.50 Aligned_cols=52 Identities=6% Similarity=-0.093 Sum_probs=39.9
Q ss_pred CCcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecC-CCCHHHHHHHHHHHHHhhCC
Q 017949 59 VSIPLIDMSKWESPEVAKSICDTAENWGFFQIVNH-GVPLEVLERVKEATHRFFAL 113 (363)
Q Consensus 59 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nH-Gv~~~l~~~~~~~~~~FF~l 113 (363)
.+|+=||++..-..+..++|..|+.++|...+.|- .++.+ +..+.++.|=.+
T Consensus 20 aei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 46787899853456788999999999999999998 78774 445666676444
No 32
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=24.25 E-value=1.3e+02 Score=30.51 Aligned_cols=107 Identities=14% Similarity=0.113 Sum_probs=59.5
Q ss_pred HHHHHHHHHhcCCCchhhhhhhhccccccceeeccCCCCCCCCCCCcccccCC-C--ceEEEec----C------CCCCc
Q 017949 185 RRLMHVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDI-S--TFTILLQ----D------DIGGL 251 (363)
Q Consensus 185 ~~ll~~ls~~Lgl~~~~~l~~~~~~~~~~lr~~~YPp~p~~~~~~g~~~HtD~-~--~lTiL~q----d------~v~GL 251 (363)
...+..|++..|++ . +.+...-+.++.|++-. -+..|.|. + .+|+++. | ..|-|
T Consensus 104 ~~Fr~~Ls~iTGi~-~------Lsg~~~D~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL 170 (633)
T 3kt7_A 104 KQYRDFFGYVTKAG-K------LSGSKTDMSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGL 170 (633)
T ss_dssp HHHHHHHHHHHTCC-C------CCSSCCCEEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCE
T ss_pred HHHHHHHHHHhCCc-c------cCCCceeEEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceE
Confidence 34456777777764 1 11111225566776532 25678884 2 3566653 2 13447
Q ss_pred eeeeCC------CCceEEecCCCCcEEEEecchhhhhcCCccccccccccC-CCCCceeEEEEee-cCCC
Q 017949 252 HVRKDN------GTEWIHVAPISGSLIINVGDALQIMSNGRYKSVEHCVIA-NGSQNRISVPLFV-NPKP 313 (363)
Q Consensus 252 qV~~~g------~~~W~~V~p~pg~lvVniGD~le~~TnG~~kS~~HRVv~-~~~~~R~Si~~F~-~P~~ 313 (363)
+++..+ ......|.|..|.+|+..-.- + ...|.|.. ...+.|+||+-.+ .|..
T Consensus 171 ~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 171 RLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLP------G---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp EECCEEETTEECSSCSEEECCCTTEEEEEECCT------T---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EEecCCCcCCCCCCceEEEecCCCeEEEEEcCC------C---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 777321 125778999999999985320 1 24565421 1277899997655 4543
No 33
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=23.67 E-value=80 Score=28.26 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=39.0
Q ss_pred CCcceeeCCCCCcHHHHHHHHHHHHhcCeEEEecCCCCHHHHHHHHHHHHHhhC
Q 017949 59 VSIPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFA 112 (363)
Q Consensus 59 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFF~l~nHGv~~~l~~~~~~~~~~FF~ 112 (363)
.+|.=|||+..-..+..++|.+|+.++|...+.|-.++.+ +..+.++.|=.
T Consensus 14 aei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 4677789886335678899999999999999999888764 34456666543
No 34
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=21.59 E-value=55 Score=20.74 Aligned_cols=43 Identities=14% Similarity=0.365 Sum_probs=33.0
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhh
Q 017949 164 FWPPVCKDEMLEYMRSSEVLIRRLMHVLVKGLNVKRIDEIREPM 207 (363)
Q Consensus 164 ~wP~~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~l~~~~ 207 (363)
.|.+.-...+.+|.+.-.++...-|.-.+..|||. ...+...+
T Consensus 3 qwseeverklkefvrrhqeitqetlheyaqklgln-qqaieqff 45 (52)
T 1y66_A 3 QWSEEVERKLKEFVRRHQEITQETLHEYAQKLGLN-QQAIEQFF 45 (52)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-HHHHHHHH
Confidence 45554455678888888899999999999999998 66666554
No 35
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=21.40 E-value=80 Score=20.50 Aligned_cols=25 Identities=12% Similarity=0.151 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCchhhhh
Q 017949 179 SSEVLIRRLMHVLVKGLNVKRIDEIR 204 (363)
Q Consensus 179 ~~~~la~~ll~~ls~~Lgl~~~~~l~ 204 (363)
.-.+|+..|.+++++.||.+ ++.+.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p-~~~v~ 42 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGAN-RQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCC-GGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcC-cccEE
Confidence 45678899999999999999 65443
No 36
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=20.71 E-value=38 Score=29.48 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=27.5
Q ss_pred cceeeCCCCCcHHHHHHHHHHHHhc-CeEEEecCCC
Q 017949 61 IPLIDMSKWESPEVAKSICDTAENW-GFFQIVNHGV 95 (363)
Q Consensus 61 iPvIDls~~~~~~~~~~l~~A~~~~-GFF~l~nHGv 95 (363)
||++++...+. +..+++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 89999876444 7889999999864 6788999996
Done!