BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017953
(363 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O08|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O1B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Ii
pdb|3O1W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O1W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O4W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O4W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O5B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O5B|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O6W|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O6W|B Chain B, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O80|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Ix
(Open State)
pdb|3O8M|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Xi
With Glucose Bound (Closed State)
Length = 485
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 185/355 (52%), Gaps = 22/355 (6%)
Query: 2 TGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 61
TG+S +L+ +IA L +FV E + LGFTFS+P Q I SG L +WTKG
Sbjct: 120 TGTSEQLWSFIAKCLKEFV---DEWYPDGVSEPLPLGFTFSYPASQKKINSGVLQRWTKG 176
Query: 62 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
F IE G DVV L + +E++ + + V AL+NDT GTL Y + +I+GTG N
Sbjct: 177 FDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVN 236
Query: 122 AAYVERAHAIPKWHGLLPK----SGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPG 175
AY + I K GLLP+ M IN E+G+F + H LP T+YD +D ES PG
Sbjct: 237 GAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPG 296
Query: 176 EQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPD 235
+Q FEK+ SG YLGEI+R VL + + F D KLK +++ T + S + D +
Sbjct: 297 QQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFEN 356
Query: 236 LRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGE 295
L K L I T ++ RKL+ +L ++V TR ARL+ G+ I K G T
Sbjct: 357 LEDTDDLFKTNLNIETTVVE-RKLIRKLAELVGTRAARLTVCGVSAICDKRGYKTAH--- 412
Query: 296 KQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSE----TVVIEHSNDGSGIG 346
IA DG +F Y + +K++ +V + + + + DGSG+G
Sbjct: 413 -----IAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVG 462
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 192/349 (55%), Gaps = 22/349 (6%)
Query: 3 GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 62
GS +LFD+I + F +G G+ LGFTFSFP RQ + G L+ WTKGF
Sbjct: 98 GSGQQLFDHIVDCIVDFQQKQG-----LSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGF 152
Query: 63 SIEDTVGEDVVGELTKAM-ERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
D G+DVV L +A+ R +++ V A+VNDT+GT+ Y + +I+GTGTN
Sbjct: 153 KASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTN 212
Query: 122 AAYVERAHAIPKWHGLLPKSGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQI 178
A Y+E + G+ SG M INMEWG F S + T +D ++D S+NPG+Q
Sbjct: 213 ACYMEELRNVA---GVPGDSGRMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQR 269
Query: 179 FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRV 238
FEK+ISGMYLGEIVR +L + F +L+ I +T +S + D S LR
Sbjct: 270 FEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESD-SLALRQ 328
Query: 239 VGKKLKDI-LEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQ 297
V L+D+ L +++ M V+E+C V+ R A+L AG+ +++K+ + R E+
Sbjct: 329 VRAILEDLGLPLTSDDALM---VLEVCQAVSQRAAQLCGAGVAAVVEKIREN--RGLEEL 383
Query: 298 KSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
+ +DG L++ + +FS+ + +TV+EL V V S DGSG G
Sbjct: 384 AVSVGVDGTLYKLHPRFSSLVAATVRELAPRCV---VTFLQSEDGSGKG 429
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose
Length = 451
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 192/359 (53%), Gaps = 20/359 (5%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M+GS ELF YIA LA F+ G ++ +LGFTFSFP Q + L++WTK
Sbjct: 108 MSGSGTELFKYIAETLADFLENNG-----MKDKKFDLGFTFSFPCVQKGLTHATLVRWTK 162
Query: 61 GFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 120
GFS + G +V L +++ L+++ A+VNDT+GTLA + +I+GTGT
Sbjct: 163 GFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGT 222
Query: 121 NAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLPL--TEYDEALDTESLNPGEQ 177
N AY+E + + G+ K E+VIN EWG F L T++D+++D +SL+PG+Q
Sbjct: 223 NVAYIEDSSKVELMDGV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQ 280
Query: 178 IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLR 237
++EK++SGMYLGE+VR ++ + E+ F +P +LK+ L T +++ + D + L
Sbjct: 281 LYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLY 340
Query: 238 VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQ 297
L D L + ++V C++V R A L+ AGI IL+++ R V
Sbjct: 341 NTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINRSEV------ 394
Query: 298 KSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGXXXXXXSHSQ 356
+ +DG L++ + KF M V +L + + + S DGSG G S ++
Sbjct: 395 --TVGVDGSLYKFHPKFCERMTDMVDKL--KPKNTRFCLRLSEDGSGKGAAAIAASCTR 449
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 169/332 (50%), Gaps = 18/332 (5%)
Query: 2 TGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 61
T + EL+++IA +L F+ E F LGFTFSFP Q I G L +WTKG
Sbjct: 121 TQNPDELWEFIADSLKAFI---DEQFPQGISEPIPLGFTFSFPASQNKINEGILQRWTKG 177
Query: 62 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
F I + DVV L K + + + + V AL+NDT GTL Y + + VI GTG N
Sbjct: 178 FDIPNIENHDVVPMLQKQITKRNIPIEVVALINDTTGTLVASYYTDPETKMGVIFGTGVN 237
Query: 122 AAYVERAHAIPKWHGLL----PKSGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPG 175
AY + I K G L P S M IN E+G+F + H LP T+YD +D ES PG
Sbjct: 238 GAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPG 297
Query: 176 EQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPD 235
+Q FEK+ SG YLGEI+R L M ++ F + K PF++ T + + + D +
Sbjct: 298 QQTFEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFEN 357
Query: 236 LRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGE 295
L ++ I NT+++ RKL+ L +++ R ARLS GI I +K G T
Sbjct: 358 LEDTDDLFQNEFGI-NTTVQERKLIRRLSELIGARAARLSVCGIAAICQKRGYKTGH--- 413
Query: 296 KQKSVIALDGGLFEHYTKFSACMQSTVKELLG 327
IA DG ++ Y F + +K++ G
Sbjct: 414 -----IAADGSVYNRYPGFKEKAANALKDIYG 440
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 185/352 (52%), Gaps = 24/352 (6%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M G+ ELFD+I + ++ F+ G G + LGFTFSFP +QTS+ +G LI WTK
Sbjct: 567 MQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPLGFTFSFPCQQTSLDAGILITWTK 621
Query: 61 GFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF D VG DVV L A++R D+ V A+VNDT+GT+ Y +I+GTG
Sbjct: 622 GFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTG 681
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHL---PLTEYDEALDTESLNPGE 176
+NA Y+E + G G+M INMEWG F + T YD +D SLN G+
Sbjct: 682 SNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGK 738
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q +EK+ISGMYLGEIVR +L ++ F + LK I T +S + D
Sbjct: 739 QRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESD----- 793
Query: 237 RVVGKKLKDILEI--SNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 294
R+ +++ IL+ N++ LV +C +V+ R A+L AG+ ++ K+ + R
Sbjct: 794 RLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGL 851
Query: 295 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
++ + +DG L++ + FS M TVKEL V S DGSG G
Sbjct: 852 DRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 190/372 (51%), Gaps = 30/372 (8%)
Query: 3 GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 62
GS +LFD++A L F+ ++ +GFTFSFP +Q+ I LI WTK F
Sbjct: 121 GSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQSKIDEAILITWTKRF 175
Query: 63 SIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
G DVV L KA+++ G D + A+VNDT+GT+ Y ++ +I+GTGTN
Sbjct: 176 KASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTN 235
Query: 122 AAYVERAHAIPKWHGLLPKSGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQI 178
A Y+E I G G M IN EWG F S TE+D A+D SLNPG+Q+
Sbjct: 236 ACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQL 292
Query: 179 FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMH------HDT 232
FEK++SGMYLGE+VR +L +MA+E F + P+L T +SA+ H+
Sbjct: 293 FEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNA 352
Query: 233 SPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 292
L +G + D +S V +C IV+ R A L AA + IL +L RD +
Sbjct: 353 KEILTRLGVEPSDDDCVS---------VQHVCTIVSFRSANLVAATLGAILNRL-RDN-K 401
Query: 293 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXX 351
+ ++ + +DG L++ + ++S T++ L+ + ++ E S G+ +
Sbjct: 402 GTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAY 461
Query: 352 XSHSQYLEVEES 363
Q+ ++EE+
Sbjct: 462 RLAEQHRQIEET 473
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 185/352 (52%), Gaps = 24/352 (6%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M G+ ELFD+I + ++ F+ G G + LGFTFSFP +QTS+ +G LI WTK
Sbjct: 567 MQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPLGFTFSFPCQQTSLDAGILITWTK 621
Query: 61 GFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF D VG DVV L A++R D+ V A+VNDT+GT+ Y +I+GTG
Sbjct: 622 GFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTG 681
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHL---PLTEYDEALDTESLNPGE 176
+NA Y+E + G G+M INMEWG F + T YD +D SLN G+
Sbjct: 682 SNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGK 738
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q +EK+ISGMYLGEIVR +L ++ F + LK I T +S + D
Sbjct: 739 QRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESD----- 793
Query: 237 RVVGKKLKDILEI--SNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 294
R+ +++ IL+ N++ LV +C +V+ R A+L AG+ ++ K+ + R
Sbjct: 794 RLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGL 851
Query: 295 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
++ + +DG L++ + FS M TVKEL V S DGSG G
Sbjct: 852 DRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 190/372 (51%), Gaps = 30/372 (8%)
Query: 3 GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 62
GS +LFD++A L F+ ++ +GFTFSFP +Q+ I LI WTK F
Sbjct: 121 GSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQSKIDEAILITWTKRF 175
Query: 63 SIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
G DVV L KA+++ G D + A+VNDT+GT+ Y ++ +I+GTGTN
Sbjct: 176 KASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTN 235
Query: 122 AAYVERAHAIPKWHGLLPKSGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQI 178
A Y+E I G G M IN EWG F S TE+D A+D SLNPG+Q+
Sbjct: 236 ACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQL 292
Query: 179 FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMH------HDT 232
FEK++SGMYLGE+VR +L +MA+E F + P+L T +SA+ H+
Sbjct: 293 FEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNA 352
Query: 233 SPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 292
L +G + D +S V +C IV+ R A L AA + IL +L RD +
Sbjct: 353 KEILTRLGVEPSDDDCVS---------VQHVCTIVSFRSANLVAATLGAILNRL-RDN-K 401
Query: 293 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXX 351
+ ++ + +DG L++ + ++S T++ L+ + ++ E S G+ +
Sbjct: 402 GTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAY 461
Query: 352 XSHSQYLEVEES 363
Q+ ++EE+
Sbjct: 462 RLAEQHRQIEET 473
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 185/352 (52%), Gaps = 24/352 (6%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M G+ ELFD+I + ++ F+ G G + LGFTFSFP +QTS+ +G LI WTK
Sbjct: 567 MQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPLGFTFSFPCQQTSLDAGILITWTK 621
Query: 61 GFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF D VG DVV L A++R D+ V A+VNDT+GT+ Y +I+GTG
Sbjct: 622 GFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTG 681
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHL---PLTEYDEALDTESLNPGE 176
+NA Y+E + G G+M INMEWG F + T YD +D SLN G+
Sbjct: 682 SNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGK 738
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q +EK+ISGMYLGEIVR +L ++ F + LK I T +S + D
Sbjct: 739 QRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESD----- 793
Query: 237 RVVGKKLKDILEI--SNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 294
R+ +++ IL+ N++ LV +C +V+ R A+L AG+ ++ K+ + R
Sbjct: 794 RLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGL 851
Query: 295 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
++ + +DG L++ + FS M TVKEL V S DGSG G
Sbjct: 852 DRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 189/372 (50%), Gaps = 30/372 (8%)
Query: 3 GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 62
GS +LFD++A L F+ ++ +GFTFSFP +Q+ I LI WTK F
Sbjct: 121 GSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQSKIDEAILITWTKRF 175
Query: 63 SIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
G DVV L KA+++ G D + A+VNDT+GT+ Y ++ +I+GTGTN
Sbjct: 176 KASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTN 235
Query: 122 AAYVERAHAIPKWHGLLPKSGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQI 178
A Y+E I G G M IN EWG F S TE+D +D SLNPG+Q+
Sbjct: 236 ACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQL 292
Query: 179 FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMH------HDT 232
FEK++SGMYLGE+VR +L +MA+E F + P+L T +SA+ H+
Sbjct: 293 FEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNA 352
Query: 233 SPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 292
L +G + D +S V +C IV+ R A L AA + IL +L RD +
Sbjct: 353 KEILTRLGVEPSDDDCVS---------VQHVCTIVSFRSANLVAATLGAILNRL-RDN-K 401
Query: 293 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXX 351
+ ++ + +DG L++ + ++S T++ L+ + ++ E S G+ +
Sbjct: 402 GTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAY 461
Query: 352 XSHSQYLEVEES 363
Q+ ++EE+
Sbjct: 462 RLAEQHRQIEET 473
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 185/352 (52%), Gaps = 24/352 (6%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M G+ ELFD+I + ++ F+ G G + LGFTFSFP +QTS+ +G LI WTK
Sbjct: 567 MQGTGEELFDHIVSCISDFLDYMG-----IKGPRMPLGFTFSFPCQQTSLDAGILITWTK 621
Query: 61 GFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF D VG DVV L A++R D+ V A+VNDT+GT+ Y +I+GTG
Sbjct: 622 GFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTG 681
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHL---PLTEYDEALDTESLNPGE 176
+NA Y+E + G G+M INMEWG F + T YD ++ SLN G+
Sbjct: 682 SNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVNEYSLNAGK 738
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q +EK+ISGMYLGEIVR +L ++ F + LK I T +S + D
Sbjct: 739 QRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESD----- 793
Query: 237 RVVGKKLKDILEI--SNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 294
R+ +++ IL+ N++ LV +C +V+ R A+L AG+ ++ K+ + R
Sbjct: 794 RLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGL 851
Query: 295 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
++ + +DG L++ + FS M TVKEL V S DGSG G
Sbjct: 852 DRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 189/372 (50%), Gaps = 30/372 (8%)
Query: 3 GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 62
GS +LFD++A L F+ ++ +GFTFSFP +Q+ I LI WTK F
Sbjct: 121 GSGSQLFDHVAECLGDFMEKRK-----IKDKKLPVGFTFSFPCQQSKIDEAILITWTKRF 175
Query: 63 SIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
G DVV L KA+++ G D + A+VNDT+GT+ Y ++ +I+GTGTN
Sbjct: 176 KASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTN 235
Query: 122 AAYVERAHAIPKWHGLLPKSGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQI 178
A Y+E I G G M IN EWG F S TE+D +D SLNPG+Q+
Sbjct: 236 ACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQL 292
Query: 179 FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMH------HDT 232
FEK++SGMYLGE+VR +L +MA+E F + P+L T +SA+ H+
Sbjct: 293 FEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNA 352
Query: 233 SPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 292
L +G + D +S V +C IV+ R A L AA + IL +L RD +
Sbjct: 353 KEILTRLGVEPSDDDCVS---------VQHVCTIVSFRSANLVAATLGAILNRL-RDN-K 401
Query: 293 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXX 351
+ ++ + +DG L++ + ++S T++ L+ + ++ E S G+ +
Sbjct: 402 GTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAY 461
Query: 352 XSHSQYLEVEES 363
Q+ ++EE+
Sbjct: 462 RLAEQHRQIEET 473
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 189/352 (53%), Gaps = 24/352 (6%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M GS +LFD+IA LA F+ + + ++ LGFTFSFP QT + L+ WTK
Sbjct: 105 MRGSGTQLFDHIAECLANFM----DKLQIKD-KKLPLGFTFSFPCHQTKLDESFLVSWTK 159
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G DVV + KA++R G D+ + A+VNDT+GT+ Y + + +I+GTG
Sbjct: 160 GFKSSGVEGRDVVALIRKAIQRRGDFDIDIVAVVNDTVGTMMTCGYDDHNCEIGLIVGTG 219
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGE 176
+NA Y+E I G G M INMEWG F S + TE+D+ +D SLNPG+
Sbjct: 220 SNACYMEEMRHIDMVEG---DEGRMCINMEWGAFGDDGSLNDIRTEFDQEIDMGSLNPGK 276
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q+FEK+ISGMY+GE+VR +L +MA+E FG + P+L T +S + +
Sbjct: 277 QLFEKMISGMYMGELVRLILVKMAKEELLFGGKLSPELLNTGRFETKDISDIEGEKDGI- 335
Query: 237 RVVGKKLKDILEISNTSLKMRKLVV--ELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 294
+K +++L V +C IV+TR A L AA + +L+++ + +
Sbjct: 336 ----RKAREVLMRLGLDPTQEDCVATHRICQIVSTRSASLCAATLAAVLQRIKEN--KGE 389
Query: 295 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
E+ +S I +DG +++ + F+ + TV+ L+ V S DGSG G
Sbjct: 390 ERLRSTIGVDGSVYKKHPHFAKRLHKTVRRLVP---GCDVRFLRSEDGSGKG 438
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 184/350 (52%), Gaps = 20/350 (5%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M G+ ELFD+I +A F+ G G LGFTFSFP +Q S+ L+KWTK
Sbjct: 553 MHGTGDELFDHIVQCIADFLEYMG-----MKGVSLPLGFTFSFPCQQNSLDESILLKWTK 607
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF GEDVV L +A+ R D+ V A+VNDT+GT+ + + +I+GTG
Sbjct: 608 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 667
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLP---LTEYDEALDTESLNPGE 176
+NA Y+E + G + G M +NMEWG F + TE+D A+D SLNPG+
Sbjct: 668 SNACYMEEMRNVELVEG---EEGRMCVNMEWGAFGDNGCLDDFRTEFDVAVDELSLNPGK 724
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q FEK+ISGMYLGEIVR +L + F + +LK I T +S + D L
Sbjct: 725 QRFEKMISGMYLGEIVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIESDCLALL 784
Query: 237 RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEK 296
+V + + L + +T +V E+C +VA R A+L AG+ ++ ++ + R +
Sbjct: 785 QV--RAILQHLGLESTC-DDSIIVKEVCTVVARRAAQLCGAGMAAVVDRIREN--RGLDA 839
Query: 297 QKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
K + +DG L++ + F+ M TVK+L + V S DGSG G
Sbjct: 840 LKVTVGVDGTLYKLHPHFAKVMHETVKDLAPK---CDVSFLQSEDGSGKG 886
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 184/352 (52%), Gaps = 24/352 (6%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
M G+ ELFD+I + ++ F+ G G + LGFTFSFP QT++ G LI WTK
Sbjct: 567 MQGTGDELFDHIVSCISDFLDYMG-----IKGPRMPLGFTFSFPCHQTNLDCGILISWTK 621
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF D G DV L A++R D+ V A+VNDT+GT+ Y +I+GTG
Sbjct: 622 GFKATDCEGHDVASLLRDAVKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEIGLIVGTG 681
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHL---PLTEYDEALDTESLNPGE 176
TNA Y+E + G G+M INMEWG F + T++D+ +D SLN G+
Sbjct: 682 TNACYMEEMKNVEMVEG---NQGQMCINMEWGAFGDNGCLDDIRTDFDKVVDEYSLNSGK 738
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q FEK+ISGMYLGEIVR +L ++ F + LK I T +S + D
Sbjct: 739 QRFEKMISGMYLGEIVRNILIDFTKKGFLFRGQISEPLKTRGIFETKFLSQIESD----- 793
Query: 237 RVVGKKLKDILEI--SNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 294
R+ +++ IL+ N++ LV +C +V+ R A+L AG+ +++K+ + R
Sbjct: 794 RLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSKRAAQLCGAGMAAVVEKIREN--RGL 851
Query: 295 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
+ + +DG L++ + FS M TVKEL TV S DGSG G
Sbjct: 852 DHLNVTVGVDGTLYKLHPHFSRIMHQTVKEL---SPKCTVSFLLSEDGSGKG 900
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 174/334 (52%), Gaps = 29/334 (8%)
Query: 3 GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 62
GS +LFD++A L F+ + P +GFTFSFP RQ+ I LI WTK F
Sbjct: 121 GSGTQLFDHVADCLGDFMEKKKIKDKKLP-----VGFTFSFPCRQSKIDEAVLITWTKRF 175
Query: 63 SIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
G DVV L KA+++ G D + A+VNDT+GT+ Y ++ +I+GTGTN
Sbjct: 176 KASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQQCEVGLIIGTGTN 235
Query: 122 AAYVERAHAIPKWHGLLPKSGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQI 178
A Y+E I G G M IN EWG F S TE+D LD SLNPG+Q+
Sbjct: 236 ACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRELDRGSLNPGKQL 292
Query: 179 FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHD------T 232
FEK++SGMY+GE+VR +L +MA+E F + P+L T +SA+ D
Sbjct: 293 FEKMVSGMYMGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKDKEGIQNA 352
Query: 233 SPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 292
L +G + D+ +S V +C IV+ R A L AA + IL +L RD +
Sbjct: 353 KEILTRLGVEPSDVDCVS---------VQHICTIVSFRSANLVAATLGAILNRL-RDN-K 401
Query: 293 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL 326
+ ++ + +DG L++ + ++S T++ L+
Sbjct: 402 GTPRLRTTVGVDGSLYKMHPQYSRRFHKTLRRLV 435
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 182/357 (50%), Gaps = 27/357 (7%)
Query: 2 TGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 61
T EL+ +IA +L F+ E ++ LGFTFS+P Q I G L +WTKG
Sbjct: 121 TKHQEELWSFIADSLKDFMV---EQELLNTKDTLPLGFTFSYPASQNKINEGILQRWTKG 177
Query: 62 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 121
F I + G DVV L + + L + + AL+NDT+GTL Y + + VI GTG N
Sbjct: 178 FDIPNVEGHDVVPLLQNEISKRELPIEIVALINDTVGTLIASYYTDPETKMGVIFGTGVN 237
Query: 122 AAYVERAHAIPKWHGLL----PKSGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPG 175
A+ + I K G L P + M IN E+G+F + H LP T+YD A+D +S PG
Sbjct: 238 GAFYDVVSDIEKLEGKLADDIPSNSPMAINCEYGSFDNEHLVLPRTKYDVAVDEQSPRPG 297
Query: 176 EQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPD 235
+Q FEK+ SG YLGE++R VL + E+ D KLK P+I+ T + + + D +
Sbjct: 298 QQAFEKMTSGYYLGELLRLVLLELNEKGLMLKDQDLSKLKQPYIMDTSYPARIEDDPFEN 357
Query: 236 LRVVGKKLKDILEIS---NTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 292
L + DI + T+L RKL+ LC+++ TR ARL+ GI I +K G T
Sbjct: 358 L----EDTDDIFQKDFGVKTTLPERKLIRRLCELIGTRAARLAVCGIAAICQKRGYKTGH 413
Query: 293 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL---GEEVSETVVIEHSNDGSGIG 346
IA DG ++ Y F ++++ G+ + + I + DGSG G
Sbjct: 414 --------IAADGSVYNKYPGFKEAAAKGLRDIYGWTGDASKDPITIVPAEDGSGAG 462
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide
Activator
pdb|3A0I|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
pdb|3GOI|A Chain A, Human Glucokinase In Complex With A Synthetic Activator
Length = 455
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 105 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 159
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 160 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 219
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 220 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 276
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 277 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 335
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 336 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 386
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 387 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 438
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And
Activator Showing A Mobile Flap
pdb|3FGU|A Chain A, Catalytic Complex Of Human Glucokinase
pdb|3ID8|A Chain A, Ternary Complex Of Human Pancreatic Glucokinase
Crystallized With Activator, Glucose And Amp-Pnp
pdb|3IDH|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose
pdb|3VEV|A Chain A, Glucokinase In Complex With An Activator And Glucose
pdb|3VF6|A Chain A, Glucokinase In Complex With Glucose And Activator
Length = 470
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 120 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 174
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 175 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 234
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 235 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 291
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 292 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 350
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 351 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 401
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 402 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 453
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3VEY|A Chain A, Glucokinase In Complex With Glucose And Atpgs
Length = 455
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 105 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 159
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 160 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 219
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 220 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 276
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 277 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 335
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 336 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 386
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 387 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 438
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3H1V|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
Length = 451
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 101 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 155
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 156 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 215
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 216 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 272
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 273 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 331
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 332 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 382
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 383 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 434
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose
pdb|4DHY|A Chain A, Crystal Structure Of Human Glucokinase In Complex With
Glucose And Activator
Length = 469
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 119 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 173
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 174 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 233
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 234 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 290
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 291 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 349
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 350 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 400
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 401 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 452
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism:
Observation Of Multiple Distinct Protein Conformations
Length = 473
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 115 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 169
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 170 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 229
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 230 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 286
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 287 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 345
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 346 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 396
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 397 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 448
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A
Synthetic Activator
Length = 455
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 105 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 159
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 160 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 219
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 220 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 276
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 277 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 335
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 336 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 386
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 387 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 438
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation
Length = 470
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 186/356 (52%), Gaps = 32/356 (8%)
Query: 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 60
MTG++ LFDYI+ ++ F+ H ++ LGFTFSFPVR I G L+ WTK
Sbjct: 120 MTGTAEMLFDYISECISDFLDK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK 174
Query: 61 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 119
GF G +VVG L A++R G +M V A+VNDT+ T+ Y + +I+GTG
Sbjct: 175 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTG 234
Query: 120 TNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF-RSSHLP--LTEYDEALDTESLNPGE 176
NA Y+E + G G M +N EWG F S L L EYD +D S NPG+
Sbjct: 235 CNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQ 291
Query: 177 QIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236
Q++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 292 QLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVKSDTGDR- 350
Query: 237 RVVGKKLKDILEISNTSLKMR------KLVVELCDIVATRGARLSAAGIVGILKKLGRDT 290
K++ +IL ++L +R +V C+ V+TR A + +AG+ G++ ++ R++
Sbjct: 351 ----KQIYNIL----STLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES 401
Query: 291 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 346
R + + + +DG +++ + F ++V+ L E IE S +GSG G
Sbjct: 402 -RSEDVMRITVGVDGXVYKLHPSFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 453
>pdb|1UQY|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With Xylopentaose
pdb|1UQZ|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With 4-O-Methyl Glucuronic Acid
pdb|1UR1|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With Arabinofuranose Alpha-1,3 Linked To
Xylobiose
pdb|1UR2|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With Arabinofuranose Alpha 1,3 Linked To
Xylotriose
Length = 378
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 257 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDG-GLFEHYTKFS 315
R+ VE+ + + RG + GI G LG DT E +KS+IA GL H+T
Sbjct: 208 REATVEMIERLQKRGMPIHGLGIQG---HLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLD 264
Query: 316 ACMQSTVKELLGEEVS 331
+ +V EL EVS
Sbjct: 265 VDVLPSVWELPVAEVS 280
>pdb|2CNC|A Chain A, Family 10 Xylanase
Length = 386
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 257 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDG-GLFEHYTKFS 315
R+ VE+ + + RG + GI G LG DT E +KS+IA GL H+T
Sbjct: 217 REATVEMIERLQKRGMPIHGLGIQG---HLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLD 273
Query: 316 ACMQSTVKELLGEEVS 331
+ +V EL EVS
Sbjct: 274 VDVLPSVWELPVAEVS 289
>pdb|1BWY|A Chain A, Nmr Study Of Bovine Heart Fatty Acid Binding Protein
Length = 132
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 289 DTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL 326
+T D K KS++ LDGG H K++ S V+E++
Sbjct: 72 ETTADDRKVKSIVTLDGGKLVHVQKWNGQETSLVREMV 109
>pdb|3RSW|A Chain A, Crystal Structure Of Heart Fatty Acid Binding Protein
(Fabp3)
pdb|3RSW|B Chain B, Crystal Structure Of Heart Fatty Acid Binding Protein
(Fabp3)
Length = 158
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 289 DTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL 326
+T D K KS++ LDGG H K+ + V+EL+
Sbjct: 98 ETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELI 135
>pdb|1G5W|A Chain A, Solution Structure Of Human Heart-Type Fatty Acid Binding
Protein
pdb|1HMR|A Chain A, 1.4 Angstroms Structural Studies On Human Muscle Fatty
Acid Binding Protein: Binding Interactions With Three
Saturated And Unsaturated C18 Fatty Acids
pdb|1HMS|A Chain A, 1.4 Angstroms Structural Studies On Human Muscle Fatty
Acid Binding Protein: Binding Interactions With Three
Saturated And Unsaturated C18 Fatty Acids
pdb|1HMT|A Chain A, 1.4 Angstroms Structural Studies On Human Muscle Fatty
Acid Binding Protein: Binding Interactions With Three
Saturated And Unsaturated C18 Fatty Acids
pdb|2HMB|A Chain A, Three-dimensional Structure Of Recombinant Human Muscle
Fatty Acid-binding Protein
Length = 132
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 289 DTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL 326
+T D K KS++ LDGG H K+ + V+EL+
Sbjct: 72 ETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELI 109
>pdb|1HKG|A Chain A, Structural Dynamics Of Yeast Hexokinase During Catalysis
Length = 457
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 37 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDT 96
LGFTF + + G + FS+ ++ + A G A + D+
Sbjct: 132 LGFTFXEAGAKEXVIKGQITXQAXAFSLAXL--XKLISAMXNAXFPAGDXXXXVADIXDS 189
Query: 97 IGTLAGGRYHNKDAIAAVILGTGTNAAY 124
G L Y + +I G+G NAAY
Sbjct: 190 HGILXXVNYTDAXIKMGIIFGSGVNAAY 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,728,734
Number of Sequences: 62578
Number of extensions: 441925
Number of successful extensions: 1323
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1173
Number of HSP's gapped (non-prelim): 36
length of query: 363
length of database: 14,973,337
effective HSP length: 100
effective length of query: 263
effective length of database: 8,715,537
effective search space: 2292186231
effective search space used: 2292186231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)