Query 017953
Match_columns 363
No_of_seqs 125 out of 715
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 07:34:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017953.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017953hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 3E-110 1E-114 844.7 30.2 343 1-359 120-466 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 3E-107 9E-112 817.3 30.4 343 1-359 96-442 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 7E-103 3E-107 795.2 32.4 347 1-359 119-475 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 4.1E-88 1.4E-92 684.9 31.1 340 1-357 108-450 (451)
5 2yhx_A Hexokinase B; transfera 100.0 2E-85 7E-90 665.3 30.9 343 1-361 100-450 (457)
6 1cza_N Hexokinase type I; stru 100.0 2E-84 6.8E-89 706.4 32.7 345 1-361 567-915 (917)
7 1cza_N Hexokinase type I; stru 100.0 7.9E-68 2.7E-72 576.0 30.2 342 2-359 120-465 (917)
8 2qm1_A Glucokinase; alpha-beta 99.0 2.7E-08 9.2E-13 95.0 18.5 270 4-352 42-320 (326)
9 2ch5_A NAGK protein; transfera 98.7 7.6E-06 2.6E-10 78.6 25.4 89 262-352 232-323 (347)
10 1z6r_A MLC protein; transcript 98.7 8.9E-07 3.1E-11 87.4 19.1 265 4-351 120-391 (406)
11 1z05_A Transcriptional regulat 98.6 2E-06 6.9E-11 85.7 20.5 265 4-352 143-414 (429)
12 2hoe_A N-acetylglucosamine kin 98.6 1.6E-06 5.4E-11 85.1 17.6 243 4-352 123-370 (380)
13 3vgl_A Glucokinase; ROK family 98.5 1.4E-05 4.9E-10 76.3 20.5 263 4-351 36-310 (321)
14 3r8e_A Hypothetical sugar kina 98.4 1.1E-05 3.7E-10 77.2 18.8 256 4-351 55-317 (321)
15 2ap1_A Putative regulator prot 98.3 3.2E-05 1.1E-09 73.8 18.0 253 4-351 59-324 (327)
16 3vov_A Glucokinase, hexokinase 98.3 0.00011 3.6E-09 69.8 20.5 252 6-352 37-294 (302)
17 2yhw_A Bifunctional UDP-N-acet 98.2 0.00012 3.9E-09 70.5 20.9 265 4-352 64-337 (343)
18 4db3_A Glcnac kinase, N-acetyl 98.2 0.00011 3.8E-09 70.5 19.2 251 4-351 59-324 (327)
19 2aa4_A Mannac kinase, putative 98.0 9.7E-05 3.3E-09 69.0 14.5 241 5-351 38-286 (289)
20 2q2r_A Glucokinase 1, putative 97.9 0.00032 1.1E-08 68.4 16.0 256 4-351 67-369 (373)
21 4htl_A Beta-glucoside kinase; 97.8 0.0026 8.9E-08 59.9 20.0 225 36-352 59-290 (297)
22 3mcp_A Glucokinase; structural 97.6 0.0025 8.5E-08 62.4 18.0 234 4-337 44-298 (366)
23 2gup_A ROK family protein; sug 97.6 0.0056 1.9E-07 57.1 19.6 222 36-352 57-286 (292)
24 2e2o_A Hexokinase; acetate and 97.6 0.0062 2.1E-07 57.0 19.1 73 262-352 214-286 (299)
25 3htv_A D-allose kinase, alloki 97.3 0.0095 3.3E-07 56.5 17.0 104 5-127 43-151 (310)
26 1zbs_A Hypothetical protein PG 97.1 0.0026 8.9E-08 59.7 10.5 70 262-352 210-279 (291)
27 1woq_A Inorganic polyphosphate 96.8 0.012 4E-07 54.4 12.4 106 4-127 50-160 (267)
28 1saz_A Probable butyrate kinas 96.7 0.041 1.4E-06 53.8 15.7 75 263-351 269-346 (381)
29 1sz2_A Glucokinase, glucose ki 96.3 0.093 3.2E-06 49.9 15.5 211 74-352 95-325 (332)
30 3epq_A Putative fructokinase; 96.2 0.095 3.3E-06 49.4 14.7 216 35-351 54-287 (302)
31 1zc6_A Probable N-acetylglucos 96.0 0.13 4.6E-06 48.0 14.3 65 262-351 226-291 (305)
32 1zxo_A Conserved hypothetical 93.3 0.16 5.3E-06 47.4 6.9 68 263-351 209-276 (291)
33 3ezw_A Glycerol kinase; glycer 75.6 11 0.00039 37.8 9.7 48 300-356 405-452 (526)
34 3ifr_A Carbohydrate kinase, FG 73.9 18 0.00061 36.2 10.6 48 300-356 403-450 (508)
35 3jvp_A Ribulokinase; PSI-II, N 69.9 13 0.00044 37.8 8.6 49 300-356 442-490 (572)
36 2ews_A Pantothenate kinase; PA 69.1 27 0.00091 32.5 9.9 80 252-355 207-286 (287)
37 3i8b_A Xylulose kinase; strain 68.2 21 0.00072 35.8 9.7 48 300-356 427-474 (515)
38 3g25_A Glycerol kinase; IDP007 65.6 25 0.00085 35.0 9.6 48 300-356 407-454 (501)
39 2p3r_A Glycerol kinase; glycer 64.2 28 0.00095 34.8 9.6 48 300-356 404-451 (510)
40 3h3n_X Glycerol kinase; ATP-bi 61.9 30 0.001 34.5 9.3 48 300-356 406-453 (506)
41 3ll3_A Gluconate kinase; xylul 61.7 32 0.0011 34.2 9.5 48 300-356 396-443 (504)
42 2d4w_A Glycerol kinase; alpha 61.5 35 0.0012 33.9 9.8 48 300-356 406-453 (504)
43 3l0q_A Xylulose kinase; xlylul 60.5 35 0.0012 34.4 9.7 48 300-356 445-492 (554)
44 1zxo_A Conserved hypothetical 57.4 1.5 5E-05 40.6 -1.2 63 75-153 75-138 (291)
45 2zf5_O Glycerol kinase; hypert 56.3 39 0.0013 33.5 9.0 47 301-356 397-443 (497)
46 2dpn_A Glycerol kinase; thermu 54.4 37 0.0013 33.6 8.5 47 301-356 402-448 (495)
47 3h6e_A Carbohydrate kinase, FG 54.4 21 0.00073 35.5 6.7 62 275-354 374-436 (482)
48 2itm_A Xylulose kinase, xylulo 53.7 40 0.0014 33.2 8.6 47 301-356 390-437 (484)
49 2i7n_A Pantothenate kinase 1; 52.2 46 0.0016 32.0 8.4 54 258-325 280-333 (360)
50 2w40_A Glycerol kinase, putati 52.0 52 0.0018 32.6 9.2 47 301-356 411-457 (503)
51 4e1j_A Glycerol kinase; struct 50.6 53 0.0018 32.8 9.0 47 301-356 429-475 (520)
52 4bc3_A Xylulose kinase; transf 45.3 36 0.0012 34.2 6.8 47 301-356 438-484 (538)
53 3hz6_A Xylulokinase; xylulose, 38.0 71 0.0024 31.7 7.6 48 300-356 405-453 (511)
54 2uyt_A Rhamnulokinase; rhamnos 37.7 1.2E+02 0.0041 29.6 9.2 46 300-355 396-441 (489)
55 1hux_A Activator of (R)-2-hydr 34.5 1.1E+02 0.0037 27.6 7.7 72 257-354 185-257 (270)
56 3arc_L Photosystem II reaction 31.8 30 0.001 22.0 2.3 28 172-199 3-30 (37)
57 3vth_A Hydrogenase maturation 26.0 2.5E+02 0.0086 29.6 9.6 49 300-354 696-748 (761)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=2.8e-110 Score=844.66 Aligned_cols=343 Identities=34% Similarity=0.601 Sum_probs=319.6
Q ss_pred CCCChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHH
Q 017953 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM 80 (363)
Q Consensus 1 ~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al 80 (363)
|+|++++||||||+||++|+++++.. ++++||||||||||+|+++++|+|++|||||++++++|+||+++|++||
T Consensus 120 ~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~Li~WTKGF~~~~v~G~DVv~lL~~al 194 (470)
T 3f9m_A 120 MTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAI 194 (470)
T ss_dssp HSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEEEeccccccCCCcCCccHHHHHHHHH
Confidence 57999999999999999999997642 4679999999999999999999999999999999999999999999999
Q ss_pred HHhC-CCceEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCC--
Q 017953 81 ERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSH-- 157 (363)
Q Consensus 81 ~r~~-~~v~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~-- 157 (363)
+|++ ++|+|+||||||||||||++|.+++|+||+|+|||||+||+|++++|+|+++ +.++||||||||+||+++
T Consensus 195 ~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~~---~~~~miINtEwG~Fg~~~~l 271 (470)
T 3f9m_A 195 KRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGEL 271 (470)
T ss_dssp HHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSSC---CSSEEEEECCGGGTTTTSTT
T ss_pred HhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeeccccccccC---CCCcEEEeechhhcCCCccc
Confidence 9998 7999999999999999999999999999999999999999999999999986 457899999999999765
Q ss_pred -CCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCCh
Q 017953 158 -LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236 (363)
Q Consensus 158 -l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~ 236 (363)
+|+|+||+++|+.|+|||+|+||||+||||||||+|+||++|++++.||++..|++|.+||+|+|++||.|++|++++
T Consensus 272 ~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~d~~~~- 350 (470)
T 3f9m_A 272 DEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR- 350 (470)
T ss_dssp GGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCCTTTTSTTCSCHHHHHHHHTCCSSC-
T ss_pred CCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCcHHhcCCCCcCchHHhhhccCCCch-
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHH
Q 017953 237 RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 316 (363)
Q Consensus 237 ~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~ 316 (363)
..++.+|++ ++++ ++.+|+.+||+||++|++|||+|+||+|+||++|+++... .+..+++||||||+|++||.|++
T Consensus 351 ~~~~~il~~-l~~~-~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~--~~~~~~~VgvDGsv~~~yp~f~~ 426 (470)
T 3f9m_A 351 KQIYNILST-LGLR-PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRS--EDVMRITVGVDGSVYKLHPSFKE 426 (470)
T ss_dssp HHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSSEEEEEEEECHHHHHCTTHHH
T ss_pred HHHHHHHHh-cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccccceEEEEeccHHHhCchHHH
Confidence 888999876 8986 6679999999999999999999999999999999986421 23467999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcchhh
Q 017953 317 CMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 359 (363)
Q Consensus 317 ~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~~~~ 359 (363)
++++++++|++ .++|+|++++||||+|||++||+++|.+.
T Consensus 427 ~~~~~l~~l~~---~~~v~l~~a~DGSg~GAAliAa~a~~~~~ 466 (470)
T 3f9m_A 427 RFHASVRRLTP---SCEITFIESEEGSGRGAALVSAVACKKAC 466 (470)
T ss_dssp HHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHcC---CCeEEEEEcCCCcHHHHHHHHHHHHHHHH
Confidence 99999999984 37999999999999999999999998763
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-107 Score=817.35 Aligned_cols=343 Identities=38% Similarity=0.624 Sum_probs=320.2
Q ss_pred CCCChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHH
Q 017953 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM 80 (363)
Q Consensus 1 ~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al 80 (363)
|+|++++||||||+||++|+++++.. ++++|||||||||++|+++++|+|++|||||++++++|+||+++|++|+
T Consensus 96 ~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~~~~~G~dv~~lL~~al 170 (445)
T 3hm8_A 96 AQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAI 170 (445)
T ss_dssp HTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeeccccCCCCCCCcHHHHHHHHH
Confidence 47899999999999999999987642 4679999999999999999999999999999999999999999999999
Q ss_pred HHh-CCCceEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCC-
Q 017953 81 ERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHL- 158 (363)
Q Consensus 81 ~r~-~~~v~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l- 158 (363)
+|+ +++|+|+||+|||||||||++|.+++|.||+|+|||||+||+|++++|+|+++ ..++||||||||+||++++
T Consensus 171 ~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~~miINtEwG~Fg~~~~l 247 (445)
T 3hm8_A 171 TRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGRMCINMEWGAFGDDGSL 247 (445)
T ss_dssp HHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSSEEEEECCGGGTTTTTTT
T ss_pred HhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCCcEEEEcchhhcCCCCCC
Confidence 998 58999999999999999999999999999999999999999999999999875 4578999999999998764
Q ss_pred --CCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCCh
Q 017953 159 --PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236 (363)
Q Consensus 159 --~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~ 236 (363)
|+|+||+++|+.|+|||+|+||||+||||||||+|+||++|++++.||++.+|+.|.+||+|+|++||.|++|++ ++
T Consensus 248 ~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~D~~-~~ 326 (445)
T 3hm8_A 248 AMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESDSL-AL 326 (445)
T ss_dssp TTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTCSCHHHHHHHTCTTC-CH
T ss_pred cCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCCCCcHHHHHHhcCCc-hH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999865 58
Q ss_pred HHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHH
Q 017953 237 RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 316 (363)
Q Consensus 237 ~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~ 316 (363)
..++.+|++ +++ .++.+|+.++|+||++|++|||+|+||+|+||++|+++... ....+++||||||+|++||.|++
T Consensus 327 ~~~~~~l~~-l~~-~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~--~~~~~~~VgvDGsvy~~~P~f~~ 402 (445)
T 3hm8_A 327 RQVRAILED-LGL-PLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRG--LEELAVSVGVDGTLYKLHPRFSS 402 (445)
T ss_dssp HHHHHHHHT-TTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSEEEEEEEECHHHHHCTTHHH
T ss_pred HHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccccCcEEEEeceehccChhHHH
Confidence 888999976 999 58999999999999999999999999999999999975321 22357999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcchhh
Q 017953 317 CMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 359 (363)
Q Consensus 317 ~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~~~~ 359 (363)
+++++++++++. ++|+|++++||||+|||++||+++|...
T Consensus 403 ~l~~~l~~l~~~---~~v~~~~s~DGSg~GAAl~AA~a~~~~~ 442 (445)
T 3hm8_A 403 LVAATVRELAPR---CVVTFLQSEDGSGKGAALVTAVACRLAQ 442 (445)
T ss_dssp HHHHHHHHHCTT---EEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC---CcEEEEECCCCchHHHHHHHHHHHHHHh
Confidence 999999999864 6899999999999999999999998765
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=7.4e-103 Score=795.17 Aligned_cols=347 Identities=37% Similarity=0.593 Sum_probs=325.4
Q ss_pred CCCChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHH
Q 017953 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM 80 (363)
Q Consensus 1 ~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al 80 (363)
|+|++++||||||+||.+|+++++.+. .++.+|+|||||||++|+++++|+|++|||||++++++|+||+++|++++
T Consensus 119 ~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al 195 (485)
T 3o8m_A 119 RTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQI 195 (485)
T ss_dssp GGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHH
Confidence 367899999999999999999987432 24679999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccC----CCCCCCceEEEeeccCccCC
Q 017953 81 ERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG----LLPKSGEMVINMEWGNFRSS 156 (363)
Q Consensus 81 ~r~~~~v~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~----~~~~~~~miINtEwG~fg~~ 156 (363)
+|++++|+|+||+||||||||+++|.+++|.||+|+|||+|+||+|++++|+|+++ ..+..++||||||||+||+.
T Consensus 196 ~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F~~~ 275 (485)
T 3o8m_A 196 EKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDNE 275 (485)
T ss_dssp HHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTTTCCTTSCTTCEEEEECCGGGTTTT
T ss_pred HhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccccccccCCCCCcEEEEcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999974 23345689999999999865
Q ss_pred --CCCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCC
Q 017953 157 --HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSP 234 (363)
Q Consensus 157 --~l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~ 234 (363)
.+|+|+||+++|+.|+|||+|+||||+||||||||+|+||++|++++.||++..|++|.+||+|+|++||.|++|+++
T Consensus 276 ~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~~~L~~~~~l~T~~ls~i~~d~~~ 355 (485)
T 3o8m_A 276 HLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFE 355 (485)
T ss_dssp CSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCCGGGGSTTCSCTHHHHHHHHCCCT
T ss_pred cccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCCcHHhcCCCCcCcHHHHHHHcCCcc
Confidence 389999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhH
Q 017953 235 DLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKF 314 (363)
Q Consensus 235 ~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f 314 (363)
++..++.+|++.|+++ ++.+|+.+||+||++|++|||+|+||+|+||+.+++. +.++||||||+|++||.|
T Consensus 356 ~l~~~~~~l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~--------~~~~VgvdGSv~~~~P~f 426 (485)
T 3o8m_A 356 NLEDTDDLFKTNLNIE-TTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGY--------KTAHIAADGSVFNRYPGY 426 (485)
T ss_dssp TCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------SSEEEEEESHHHHHSTTH
T ss_pred hHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEEecChhccCccH
Confidence 9999999999999996 8899999999999999999999999999999999975 479999999999999999
Q ss_pred HHHHHHHHHHHhCCCC----cccEEEEEcCCchHHHHHHHHHHhcchhh
Q 017953 315 SACMQSTVKELLGEEV----SETVVIEHSNDGSGIGAALLAASHSQYLE 359 (363)
Q Consensus 315 ~~~~~~~l~~l~~~~~----~~~v~l~~~~DgS~~GAAi~aa~~~~~~~ 359 (363)
+++++++++++++... .++|+|++++||||+|||++||++++...
T Consensus 427 ~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~~~~ 475 (485)
T 3o8m_A 427 KEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKRLA 475 (485)
T ss_dssp HHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHHHHh
Confidence 9999999999987422 47899999999999999999999987653
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=4.1e-88 Score=684.86 Aligned_cols=340 Identities=36% Similarity=0.625 Sum_probs=319.1
Q ss_pred CCCChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHH
Q 017953 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM 80 (363)
Q Consensus 1 ~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al 80 (363)
|++++++||||||+||++|+++++.. .+.+++|||||||++|+++++|+|++|||||++++++|+||+++|++++
T Consensus 108 ~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al 182 (451)
T 1bdg_A 108 MSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTEL 182 (451)
T ss_dssp TTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHH
Confidence 46889999999999999999987632 2469999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCC---
Q 017953 81 ERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSH--- 157 (363)
Q Consensus 81 ~r~~~~v~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~--- 157 (363)
+|+++||+|+||+||||||||+++|.+++|.||+|+|||+|+||+|+.++|+|+.+. ..++|+||+|||.||+++
T Consensus 183 ~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~g~--~~g~m~In~EwG~f~~~~~~~ 260 (451)
T 1bdg_A 183 DKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGV--KEPEVVINTEWGAFGEKGELD 260 (451)
T ss_dssp HTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGCSC--SSSEEEEECCGGGTTTTSTTT
T ss_pred HHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcCCC--ccCcEEEecCcccCCCccccc
Confidence 999999999999999999999999999999999999999999999999999998763 457899999999999865
Q ss_pred CCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChH
Q 017953 158 LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLR 237 (363)
Q Consensus 158 l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~ 237 (363)
+|+|+||+++|..|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..|+.+.++|+|+|++||.|++|+++++.
T Consensus 261 ~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~ 340 (451)
T 1bdg_A 261 CWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLY 340 (451)
T ss_dssp TTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCH
T ss_pred CCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchHhhcCCCccchHHHhhhhccCccchH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHH
Q 017953 238 VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSAC 317 (363)
Q Consensus 238 ~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~ 317 (363)
.++.+++..++++.++.+|+.++|.+|++|++|||+++|++|+|++++++. ++++|++|||+|++||.|+++
T Consensus 341 ~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~--------~~~~V~i~Ggv~~~~~~~~~~ 412 (451)
T 1bdg_A 341 NTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR--------SEVTVGVDGSLYKFHPKFCER 412 (451)
T ss_dssp HHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------SEEEEEEESHHHHHCTTHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEEeCchhcCchhHHHH
Confidence 999999887888766899999999999999999999999999999999975 478999999999999999999
Q ss_pred HHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcch
Q 017953 318 MQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 357 (363)
Q Consensus 318 ~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~~ 357 (363)
+++++++++++ ..+|++.+++|||++|||++|++++|.
T Consensus 413 l~~~l~~~~~~--~~~i~~~l~~dgs~iGAAllA~~~~~~ 450 (451)
T 1bdg_A 413 MTDMVDKLKPK--NTRFCLRLSEDGSGKGAAAIAASCTRQ 450 (451)
T ss_dssp HHHHHHHHSCT--TCEEEEEECTTHHHHHHHHHHTTC---
T ss_pred HHHHHHHHhCC--CCcEEEEECCCccHHHHHHHHHHHhhc
Confidence 99999999876 468999999999999999999988763
No 5
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=2e-85 Score=665.31 Aligned_cols=343 Identities=21% Similarity=0.250 Sum_probs=318.7
Q ss_pred CCCChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHH
Q 017953 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM 80 (363)
Q Consensus 1 ~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al 80 (363)
|++++++||||||+||.+|+++++.. .++.+++|||||||+.|+++++|+|++|||||++++++ ||+++|++++
T Consensus 100 ~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~--~v~~~L~~~l 173 (457)
T 2yhx_A 100 TTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAFSLAXLX--KLISAMXNAX 173 (457)
T ss_dssp SCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTCCCSSCS--SBHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCCCcchhH--HHHHHHHHhH
Confidence 46789999999999999999987532 23568999999999999999999999999999999988 9999999999
Q ss_pred HHhCCCceEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccCCC-C-CCCceEEEeeccCccCCC-
Q 017953 81 ERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL-P-KSGEMVINMEWGNFRSSH- 157 (363)
Q Consensus 81 ~r~~~~v~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~-~-~~~~miINtEwG~fg~~~- 157 (363)
+|+++|++|++|+|||+||+|+++|.++++.||+|+|||+|+||+++.++|+|+++.. + ..+.|+||||||.|++++
T Consensus 174 ~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~~g~~~in~EwG~f~~~~~ 253 (457)
T 2yhx_A 174 FPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGGAGXMXICCDQSSFRKAFP 253 (457)
T ss_dssp HHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCSSCCEEEECCCTTTTTTCS
T ss_pred hhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCcccccccccccccCCceEEEEEcccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999996531 2 367899999999998654
Q ss_pred -CCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCCh
Q 017953 158 -LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236 (363)
Q Consensus 158 -l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~ 236 (363)
+|+|+||+++|..|.||| |+||||+||||||||+|++|+++.+++.||.+ .|++|.+||+|+|++||.|++|+++++
T Consensus 254 ~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~~~~t~~ls~i~~d~~~~l 331 (457)
T 2yhx_A 254 SLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAANVENTSYPAKIQKLPHFDL 331 (457)
T ss_dssp SSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTTCSCTHHHHHHHHCCSSSC
T ss_pred cCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhcccccCcChHHHHHHhcCCchhh
Confidence 799999999999999999 99999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHH
Q 017953 237 RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 316 (363)
Q Consensus 237 ~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~ 316 (363)
..++.+|++.++++ ++.+|++++|+||++|++|||+|+|++|+||+++++. ++++|++|||+ ++||.|++
T Consensus 332 ~~~~~il~~~~~~~-~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~--------~~~~V~vdGsv-~~~p~f~~ 401 (457)
T 2yhx_A 332 RXXXDLFXGDQGIA-XKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY--------SSGHIAAXGSX-RSYSGFSX 401 (457)
T ss_dssp HHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC--------SSEEEEEESTT-TTSTTHHH
T ss_pred hHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------CcEEEEEECCc-ccCchHHH
Confidence 99999998889986 6999999999999999999999999999999999975 36899999999 99999999
Q ss_pred HHHHHHHHHhCCCC----cccEEEEEcCCchHHHHHHHHHHhcchhhhc
Q 017953 317 CMQSTVKELLGEEV----SETVVIEHSNDGSGIGAALLAASHSQYLEVE 361 (363)
Q Consensus 317 ~~~~~l~~l~~~~~----~~~v~l~~~~DgS~~GAAi~aa~~~~~~~~~ 361 (363)
+++++++++++++. .++|+|++++||||+||||+||+++++...+
T Consensus 402 ~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~~~~~~ 450 (457)
T 2yhx_A 402 NSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASAXXSXA 450 (457)
T ss_dssp HHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhhhhhhh
Confidence 99999999997643 4689999999999999999999999987644
No 6
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=2e-84 Score=706.44 Aligned_cols=345 Identities=38% Similarity=0.605 Sum_probs=316.3
Q ss_pred CCCChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHH
Q 017953 1 MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM 80 (363)
Q Consensus 1 ~~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al 80 (363)
|++++++||||||+||.+|+++++.. ++.+|||||||||++|+++++|.|++|||||++++++|+||+++|++++
T Consensus 567 ~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al 641 (917)
T 1cza_N 567 MQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAI 641 (917)
T ss_dssp HTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecccccCCcCCCcHHHHHHHHH
Confidence 36889999999999999999987642 3568999999999999999999999999999999999999999999999
Q ss_pred HHh-CCCceEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCC--
Q 017953 81 ERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSH-- 157 (363)
Q Consensus 81 ~r~-~~~v~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~-- 157 (363)
+|+ +++|+|+||+||||||||+++|.+++|.||+|+|||+|+||+|+.++|+++.+ ..++|+||+|||+||+++
T Consensus 642 ~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~~g~m~In~EwG~fg~~~~l 718 (917)
T 1cza_N 642 KRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCL 718 (917)
T ss_dssp HHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---CSSEEEEECCGGGTTTTSTT
T ss_pred HhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---CcCcEEEecccccCCCcccc
Confidence 987 79999999999999999999999999999999999999999999999999864 357899999999999865
Q ss_pred -CCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCCh
Q 017953 158 -LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236 (363)
Q Consensus 158 -l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~ 236 (363)
+|+|+||+++|+.|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..|+.|.++++|+|++||.|++|++ ++
T Consensus 719 ~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~ie~d~~-~~ 797 (917)
T 1cza_N 719 DDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRL-AL 797 (917)
T ss_dssp TTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSC-CH
T ss_pred cCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccCCccchHHhhhhhcCcc-hh
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999987 56
Q ss_pred HHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHH
Q 017953 237 RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 316 (363)
Q Consensus 237 ~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~ 316 (363)
..++.+++. ++++ ++.+|+.++|+||++|++|||+|+|++|+||+++++.+.. .+..+++|++|||+|++||.|++
T Consensus 798 ~~~~~i~~~-~~~~-~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~--~~~~~~~V~vdGsv~~~~p~f~~ 873 (917)
T 1cza_N 798 LQVRAILQQ-LGLN-STCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRG--LDRLNVTVGVDGTLYKLHPHFSR 873 (917)
T ss_dssp HHHHHHHHH-HTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSEEEEEEEECHHHHHCTTHHH
T ss_pred hHHHHHHHH-hCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc--cCccceEEEECCHHHHcCcHHHH
Confidence 777888875 7884 7899999999999999999999999999999999965211 22245899999999999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcchhhhc
Q 017953 317 CMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEVE 361 (363)
Q Consensus 317 ~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~~~~~~ 361 (363)
+++++++++.+. ++|+|++++||||+|||++||+++|.+.-.
T Consensus 874 ~~~~~l~~l~~~---~~v~~~~~~dgsg~GAAl~aa~~~~~~~~~ 915 (917)
T 1cza_N 874 IMHQTVKELSPK---CNVSFLLSEDGSGKGAALITAVGVRLRTEA 915 (917)
T ss_dssp HHHHHHHHHSTT---EEEEEEECSSCSHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhCCC---CceEEEEecCChHHHHHHHHHHHHHHHhhc
Confidence 999999999743 689999999999999999999999887643
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=7.9e-68 Score=576.04 Aligned_cols=342 Identities=36% Similarity=0.576 Sum_probs=310.6
Q ss_pred CCChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHH
Q 017953 2 TGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAME 81 (363)
Q Consensus 2 ~g~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~ 81 (363)
.+++++||||||+||.+|+++++.. .+.+++|||||||++|+++++|+|++|||||++++++|+||+++|+++++
T Consensus 120 ~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~ 194 (917)
T 1cza_N 120 HGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIK 194 (917)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEecccCCCCCcccCCchHHHHHHHHh
Confidence 4688999999999999999987532 24579999999999999999999999999999999999999999999999
Q ss_pred HhC-CCceEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCC---
Q 017953 82 RIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSH--- 157 (363)
Q Consensus 82 r~~-~~v~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~--- 157 (363)
|++ +++++++|+|||+||+|+.+|.++++.||+|+|||+|+||+++..+|+++.+. .++|+||+|||.|++++
T Consensus 195 r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~---~g~~~in~E~G~f~~~~~l~ 271 (917)
T 1cza_N 195 KRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD---EGRMCINTEWGAFGDDGSLE 271 (917)
T ss_dssp HHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC---SSEEEEECCGGGTTTTTTTT
T ss_pred hcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC---CCceEEeccccccCCccccc
Confidence 997 89999999999999999999999999999999999999999999999998762 46799999999998765
Q ss_pred CCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChH
Q 017953 158 LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLR 237 (363)
Q Consensus 158 l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~ 237 (363)
+|+|+||..+|..+.|||+|+||||+||+||||++|+++.++.+++.+|.+..|+.|.+++.+++++++.++ |+++++.
T Consensus 272 ~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l~~~~~l~t~~vs~~~-~~~~~~~ 350 (917)
T 1cza_N 272 DIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE-KNKEGLH 350 (917)
T ss_dssp TTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSSCHHHHHHHT-CTTTHHH
T ss_pred cCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhhccccccChHHHHHHh-cccccHH
Confidence 369999999999999999999999999999999999999999999889998889999999999999999999 5677888
Q ss_pred HHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHH
Q 017953 238 VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSAC 317 (363)
Q Consensus 238 ~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~ 317 (363)
.+..+++. ++++ ++..|++.++.+|..|.+|+|+++|++|++|+.+++.+.. .+..+.+|+++||++++||.|++.
T Consensus 351 ~~~~i~~~-~~~~-~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~--~~~~~~~IvigGgV~~~~~~~~~~ 426 (917)
T 1cza_N 351 NAKEILTR-LGVE-PSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKG--TPRLRTTVGVDGSLYKTHPQYSRR 426 (917)
T ss_dssp HHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CSSEEEEEEEECHHHHHCSSHHHH
T ss_pred HHHHHHHH-hCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--ccCcceEEEECCchhhccHHHHHH
Confidence 88888876 7885 7899999999999999999999999999999999833110 122458999999999999999999
Q ss_pred HHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcchhh
Q 017953 318 MQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 359 (363)
Q Consensus 318 ~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~~~~ 359 (363)
++++++++++. .++++++++|||++|||++||++++.++
T Consensus 427 l~~~l~~~~~~---~~~~i~~a~dgs~~GAA~laa~~~~l~k 465 (917)
T 1cza_N 427 FHKTLRRLVPD---SDVRFLLSESGSGKGAAMVTAVAYRLAE 465 (917)
T ss_dssp HHHHHHHHCTT---EEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC---CceEEEEeccchHHHHHHHHHhHhhhhh
Confidence 99999999833 5899999999999999999999887654
No 8
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.97 E-value=2.7e-08 Score=94.96 Aligned_cols=270 Identities=17% Similarity=0.161 Sum_probs=157.2
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCC-cHHHHHHHHHHH
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMER 82 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~-dv~~lL~~al~r 82 (363)
+.+++++.+.+.|.+++++.+.. ..+..-+|+...=|++. ++|+++ ++-.+. ..+. ++.+.|++.+
T Consensus 42 ~~~~~~~~l~~~i~~~~~~~~~~----~~~i~~igi~~pG~vd~---~~g~v~-~~~~l~---w~~~~~l~~~l~~~~-- 108 (326)
T 2qm1_A 42 DGKHIVPSIIESIRHRIDLYNMK----KEDFVGIGMGTPGSVDI---EKGTVV-GAYNLN---WTTVQPVKEQIESAL-- 108 (326)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTCC----GGGEEEEEEEESSEEET---TTTEEE-CBGGGT---BCSCBCHHHHHHHHH--
T ss_pred CHHHHHHHHHHHHHHHHHHcCCC----ccceeEEEEecccceeC---CCCEEE-ecCCCC---ccCCchHHHHHHHHh--
Confidence 46889999999999999886421 11223345544445554 346655 333332 2356 8888887765
Q ss_pred hCCCceEEEEEeccHHhhhcccc----cCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCC
Q 017953 83 IGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHL 158 (363)
Q Consensus 83 ~~~~v~v~aivNDTVaTlla~ay----~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l 158 (363)
++| +.|.||+.+..++-.+ .+.+..+.+++|||..++++.+-.- +.+.. -.--|||..
T Consensus 109 -~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGiG~giv~~G~l---~~G~~------g~aGE~Gh~----- 170 (326)
T 2qm1_A 109 -GIP---FALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKL---LHGVA------GCAGEVGHV----- 170 (326)
T ss_dssp -CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEETTEE---CCCSS------SCTTCGGGS-----
T ss_pred -CCC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEECCEE---eecCC------CcccccCcE-----
Confidence 444 5688999999887654 3457889999999999999864111 11100 001244432
Q ss_pred CCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccC-CCCChH
Q 017953 159 PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHD-TSPDLR 237 (363)
Q Consensus 159 ~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d-~~~~~~ 237 (363)
+..+ |- ..-.-.....+|.++|+..|-+.++..+ .. ...+. .+..+..+ ...+..
T Consensus 171 ~~~~-~g---~~c~cG~~gcle~~~s~~~l~~~~~~~~----~~-----~~~~~-----------~~~~~~~~~~~~~~~ 226 (326)
T 2qm1_A 171 TVDP-NG---FDCTCGKRGCLETVSSATGVVRVARHLS----EE-----FAGDS-----------ELKQAIDDGQDVSSK 226 (326)
T ss_dssp BSCT-TS---CBCTTSSBCBTHHHHSHHHHHHHHHHHT----TT-----CCSCC-----------HHHHHHHHTCCCCHH
T ss_pred EECC-CC---CcCCCCCccchHhhhCHHHHHHHHHHHh----hc-----ccccc-----------hhhhccccccCCCHH
Confidence 1110 00 0000112457899999988866555421 00 00000 01000000 001111
Q ss_pred HHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHH
Q 017953 238 VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSAC 317 (363)
Q Consensus 238 ~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~ 317 (363)
.+.+...+ - -..|..+.+|+++.+|.+++.++..++. + .|.+.|++.+..|.|.+.
T Consensus 227 ~v~~~a~~------g--------d~~a~~i~~~~~~~L~~~i~~l~~~l~p--------~--~IvlgGg~~~~~~~~~~~ 282 (326)
T 2qm1_A 227 DVFEFAEK------G--------DHFALMVVDRVCFYLGLATGNLGNTLNP--------D--SVVIGGGVSAAGEFLRSR 282 (326)
T ss_dssp HHHHHHHT------T--------CHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEEESGGGGTHHHHHH
T ss_pred HHHHHHHc------C--------CHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEcChhhhchHHHHHH
Confidence 11111111 0 1457788999999999999999998864 2 477899999889999999
Q ss_pred HHHHHHHHhCCCCcccEEEEE---cCCchHHHHHHHHH
Q 017953 318 MQSTVKELLGEEVSETVVIEH---SNDGSGIGAALLAA 352 (363)
Q Consensus 318 ~~~~l~~l~~~~~~~~v~l~~---~~DgS~~GAAi~aa 352 (363)
+++.+++...+.....+.+.. .+|...+|||..+.
T Consensus 283 l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 283 VEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp HHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred HHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 999998764321111344554 45677899987764
No 9
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.69 E-value=7.6e-06 Score=78.59 Aligned_cols=89 Identities=13% Similarity=0.163 Sum_probs=65.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHh--CC-CCcccEEEEE
Q 017953 262 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL--GE-EVSETVVIEH 338 (363)
Q Consensus 262 ~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~--~~-~~~~~v~l~~ 338 (363)
..|..+.+|+++.+|.+++.++..++.... .......|.+.|++.+..|.|.+.+++.+++.. +. .....|.+..
T Consensus 232 ~~a~~il~~~~~~La~~i~~l~~~~~p~~~--~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~ 309 (347)
T 2ch5_A 232 PLSRYIFRKAGEMLGRHIVAVLPEIDPVLF--QGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMK 309 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGSCGGGG--CSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEe
Confidence 457789999999999999999988764200 011235788899999988999999999998774 22 1123566666
Q ss_pred cCCchHHHHHHHHH
Q 017953 339 SNDGSGIGAALLAA 352 (363)
Q Consensus 339 ~~DgS~~GAAi~aa 352 (363)
..+.+.+|||..+.
T Consensus 310 ~~~a~~~GAa~la~ 323 (347)
T 2ch5_A 310 LRHSSALGGASLGA 323 (347)
T ss_dssp ESSCTHHHHHHHHH
T ss_pred cCCChHHHHHHHHH
Confidence 66788899998774
No 10
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.68 E-value=8.9e-07 Score=87.43 Aligned_cols=265 Identities=15% Similarity=0.138 Sum_probs=157.5
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHh
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 83 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~ 83 (363)
+.+++++.+++.|.+++++.+.. ..+..-+|+.+.-|++. ++|.+. +...+ ++..+.++.+.|++.+
T Consensus 120 ~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~~l--~~w~~~~l~~~l~~~~--- 186 (406)
T 1z6r_A 120 DDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVH-RMPFY--EDVKEMPLGEALEQHT--- 186 (406)
T ss_dssp CSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEE-ECTTC--TTCSSBCHHHHHHHHH---
T ss_pred CHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEe-cCCCC--CCccCCCHHHHHHHHH---
Confidence 46889999999999999876421 12234566666666765 357776 44333 2334678888888766
Q ss_pred CCCceEEEEEeccHHhhhccccc----CCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCC
Q 017953 84 GLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLP 159 (363)
Q Consensus 84 ~~~v~v~aivNDTVaTlla~ay~----~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~ 159 (363)
++| +.|.||..+..++-.+. +.+..+-+.+|||..++++.+=. + +.+ .--.--|||..-
T Consensus 187 ~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~-l--~~G------~~g~AGEiGh~~----- 249 (406)
T 1z6r_A 187 GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGH-L--LHA------GSSSLVEIGHTQ----- 249 (406)
T ss_dssp SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTE-E--TTT------TSSCCBCGGGSB-----
T ss_pred CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCE-E--eec------CCCcCccCCceE-----
Confidence 454 56789999998876543 45778999999999999986411 0 111 001123455331
Q ss_pred CcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHH
Q 017953 160 LTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVV 239 (363)
Q Consensus 160 ~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~ 239 (363)
..+ |-.. -.-.+ ...+|..+|+..|-+.++..+. . .+ +.. + .....+...+
T Consensus 250 v~~-~g~~-c~cG~--~gclE~~~S~~al~~~~~~~~~----~--~~----~~~----~-----------~~~~~~~~~v 300 (406)
T 1z6r_A 250 VDP-YGKR-CYCGN--HGCLETIASVDSILELAQLRLN----Q--SM----SSM----L-----------HGQPLTVDSL 300 (406)
T ss_dssp SCT-TSCB-CTTSC--BSBTHHHHSHHHHHHHHHHHHT----T--CT----TCG----G-----------GSSCCCHHHH
T ss_pred ecC-CCCC-CCCCC--ccchHHHcCHHHHHHHHHHhhh----c--cc----ccc----c-----------CcccCCHHHH
Confidence 100 0000 00112 3578999998776554443210 0 00 000 0 0001122222
Q ss_pred HHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHH
Q 017953 240 GKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 319 (363)
Q Consensus 240 ~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~ 319 (363)
.+...+ -+ ..|..+.+++++.+|.+++.++..++. + .|.+.|++....|.|.+.++
T Consensus 301 ~~~a~~------gD--------~~a~~~l~~~~~~L~~~i~~l~~~ldP--------~--~IvlgG~i~~~~~~l~~~i~ 356 (406)
T 1z6r_A 301 CQAALR------GD--------LLAKDIITGVGAHVGRILAIMVNLFNP--------Q--KILIGSPLSKAADILFPVIS 356 (406)
T ss_dssp HHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGHHHHHHHHH
T ss_pred HHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEeCccchhhHHHHHHHH
Confidence 222221 11 345678899999999999999998864 2 36678999988899999999
Q ss_pred HHHHHHhCCCCcccEEEEE---cCCchHHHHHHHH
Q 017953 320 STVKELLGEEVSETVVIEH---SNDGSGIGAALLA 351 (363)
Q Consensus 320 ~~l~~l~~~~~~~~v~l~~---~~DgS~~GAAi~a 351 (363)
+.+++..-+.....+.+.. .+|...+|||++.
T Consensus 357 ~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 357 DSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp HHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred HHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 9888763111011344443 4677899997654
No 11
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.65 E-value=2e-06 Score=85.66 Aligned_cols=265 Identities=14% Similarity=0.139 Sum_probs=156.5
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHh
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 83 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~ 83 (363)
+++++++.+++.|.+++.+.+.. ..+..-+|+...-|++. ++|+++ +...+. ..+.++.+.|++.+
T Consensus 143 ~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~~l~---w~~~~l~~~L~~~~--- 208 (429)
T 1z05_A 143 DQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVNS---EQGIVL-QMPHYN---VKNLALGPEIYKAT--- 208 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEET---TTTEEE-ECSSSB---CSSBCHHHHHHHHH---
T ss_pred CHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEeC---CCCeEe-ecCCCC---CCCCCHHHHHHHHh---
Confidence 46889999999999999886432 12234566666666665 346655 333333 23578888888765
Q ss_pred CCCceEEEEEeccHHhhhccccc----CCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCC
Q 017953 84 GLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLP 159 (363)
Q Consensus 84 ~~~v~v~aivNDTVaTlla~ay~----~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~ 159 (363)
++| +.|.||..+..++-.+. +.+..+.+.+|||..++++.+=. + +.+.. -.=-|||.. +
T Consensus 209 ~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~-l--~~G~~------g~AGEiGH~-----~ 271 (429)
T 1z05_A 209 GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGR-V--LQGRH------GNIGELGHI-----Q 271 (429)
T ss_dssp CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTE-E--CCTTT------TCTTBCTTS-----B
T ss_pred CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCE-E--eeCCC------CcccccCce-----E
Confidence 555 56889999988876543 45788999999999999986411 1 11100 001234422 1
Q ss_pred CcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHH
Q 017953 160 LTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVV 239 (363)
Q Consensus 160 ~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~ 239 (363)
..+ |-.. -.-.+ .-.+|..+|+.-|-+.++..+ ..+ . ++.+. ..+..+...+
T Consensus 272 v~~-~g~~-c~cG~--~gclE~~~S~~al~~~~~~~~----~~~-----~-~~~l~--------------~~~~~~~~~i 323 (429)
T 1z05_A 272 IDP-QGKR-CHCGN--YGCLETVASSQAIRDQVTARI----QAG-----E-PSCLA--------------TVEEISIEDI 323 (429)
T ss_dssp CCT-TCCB-CTTSC--BSBTHHHHSHHHHHHHHHHHH----HTT-----C-CCTTT--------------TCSSCCHHHH
T ss_pred EcC-CCCC-CCCCC--CcchHHHhCHHHHHHHHHHHh----hcc-----c-ccccc--------------cccCCCHHHH
Confidence 100 0000 00111 356899999876654444321 111 0 11110 0001122222
Q ss_pred HHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHH
Q 017953 240 GKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 319 (363)
Q Consensus 240 ~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~ 319 (363)
.+...+ -+ ..|..+.+++++.+|.+++.++..++. + .|.+.|++....|.|.+.++
T Consensus 324 ~~~a~~------gD--------~~a~~il~~~~~~L~~~i~~l~~~ldP--------~--~IvlgG~i~~~~~~l~~~l~ 379 (429)
T 1z05_A 324 CAAAAD------GD--------PLAVDVIQQLGRYLGAAIAIVINLFNP--------E--KILIGGVINQAKSILYPSIE 379 (429)
T ss_dssp HHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGHHHHHHHHH
T ss_pred HHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEeCccccchHHHHHHHH
Confidence 222221 01 346678899999999999999998864 2 46678999988899999999
Q ss_pred HHHHHHhCCCCcccEEEEE---cCCchHHHHHHHHH
Q 017953 320 STVKELLGEEVSETVVIEH---SNDGSGIGAALLAA 352 (363)
Q Consensus 320 ~~l~~l~~~~~~~~v~l~~---~~DgS~~GAAi~aa 352 (363)
+.+++..-+.....+.+.. .+| ..+|||..+.
T Consensus 380 ~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 380 QCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp HHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred HHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 9988763211011344444 456 8999997763
No 12
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.59 E-value=1.6e-06 Score=85.11 Aligned_cols=243 Identities=16% Similarity=0.137 Sum_probs=144.7
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHh
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 83 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~ 83 (363)
+.+++++.+++.|.+++.+.+... .+..-+|+...-|++. .+|.+. +...+. ..+.++.+.|++.+
T Consensus 123 ~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~---~~g~v~-~~~~l~---w~~~~l~~~l~~~~--- 188 (380)
T 2hoe_A 123 DREETLNVMYRIIDRAKDMMEKLG----SKLSALTVAAPGPIDT---ERGIII-DPRNFP---LSQIPLANLLKEKY--- 188 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTT----CCCCEEEEEESSCEET---TTTEEC-CCSSCT---TBTSCHHHHHHHHH---
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCc----CcEEEEEEEeeccEEC---CCCEEe-ccCCCC---CcCCChHHHHHHHh---
Confidence 578899999999999998754211 1223455555555554 245554 333332 34678888888766
Q ss_pred CCCceEEEEEeccHHhhhcccccCC--CceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCCCc
Q 017953 84 GLDMRVAALVNDTIGTLAGGRYHNK--DAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLT 161 (363)
Q Consensus 84 ~~~v~v~aivNDTVaTlla~ay~~~--~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~~T 161 (363)
++| +.|.||..+..++-.+... +..+.+.+|||..++++.+-.- +.+.. -.--|||.. +
T Consensus 189 ~~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l---~~G~~------g~aGEiGh~-----~-- 249 (380)
T 2hoe_A 189 GIE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGEL---YRGEN------GYAGEIGYT-----R-- 249 (380)
T ss_dssp CSE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEE---CCCSS------SCCCCGGGC-----E--
T ss_pred CCC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEE---eccCC------Cccccccce-----E--
Confidence 443 6788999999888655332 7789999999999999864111 11100 000122211 1
Q ss_pred ccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHHHH
Q 017953 162 EYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGK 241 (363)
Q Consensus 162 ~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~ 241 (363)
+|.. ..-.--....+|..+|+..|-+ ..+ .+ .+
T Consensus 250 -v~~~--~~c~cG~~gclE~~~s~~~l~~------------------~~~------------~v--------------~~ 282 (380)
T 2hoe_A 250 -VFNG--NEYVFLEDVCNENVVLKHVLSM------------------GFS------------SL--------------AE 282 (380)
T ss_dssp -EECS--SSEEEHHHHHCHHHHHHHHHHH------------------CCC-------------T--------------TH
T ss_pred -ecCC--CCCCCCCccHHHHHcCHHHHHH------------------HHH------------HH--------------HH
Confidence 1110 0000001245666666644321 000 00 00
Q ss_pred HHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHH
Q 017953 242 KLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQST 321 (363)
Q Consensus 242 il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~ 321 (363)
...+ -+ ..+..+.+++++.+|.+++.++..++. + .|.+.|++....|.|.+.+++.
T Consensus 283 ~a~~------gD--------~~a~~~l~~~~~~La~~i~~l~~~ldP--------~--~IvlgG~~~~~~~~l~~~l~~~ 338 (380)
T 2hoe_A 283 ARDS------GD--------VRVKEYFDDIARYFSIGLLNLIHLFGI--------S--KIVIGGFFKELGENFLKKIKIE 338 (380)
T ss_dssp HHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEEEGGGGGHHHHHHHHHHH
T ss_pred HHHC------CC--------HHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEEEcCchhhhhHHHHHHHHHH
Confidence 1111 00 235568899999999999999998864 2 3667899988889999999999
Q ss_pred HHHHhCCCCcccEEEEE---cCCchHHHHHHHHH
Q 017953 322 VKELLGEEVSETVVIEH---SNDGSGIGAALLAA 352 (363)
Q Consensus 322 l~~l~~~~~~~~v~l~~---~~DgS~~GAAi~aa 352 (363)
+.+...+. ..+.+.. .+|...+|||..+.
T Consensus 339 l~~~~~~~--~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 339 VETHLLYK--HSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp HHHHCSSS--CCCEEEECCCCSCHHHHHHHHHHH
T ss_pred HHHhcCCC--CCcEEEEcCCCCcHHHHHHHHHHH
Confidence 98775432 2344443 45678899997763
No 13
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.47 E-value=1.4e-05 Score=76.35 Aligned_cols=263 Identities=15% Similarity=0.181 Sum_probs=152.6
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecc--eecccCCceEEEecccceecCCCCCCcHHHHHHHHHH
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAME 81 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP--~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~ 81 (363)
+.+++++.|++.|.+++.+. -..|+.++.| ++. ++|.+.. +-.+ +-.+.++.+.|++.+
T Consensus 36 ~~~~~~~~i~~~i~~~~~~~-----------~i~gigi~~pG~vd~---~~g~v~~-~~~l---~w~~~~l~~~l~~~~- 96 (321)
T 3vgl_A 36 TAEGIVDAICAAVAGASEGH-----------DVEAVGIGAAGYVDD---KRATVLF-APNI---DWRHEPLKDKVEQRV- 96 (321)
T ss_dssp SHHHHHHHHHHHHHHHHTTC-----------CEEEEEEEESSEECT---TSSCEEE-CSSS---CCEEECHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHhhc-----------CceEEEEeccccEeC---CCCEEEe-CCCC---CCcCCCHHHHHhhhh-
Confidence 46788999999998887541 1245555555 443 3454432 2222 223567778887766
Q ss_pred HhCCCceEEEEEeccHHhhhcccc----cCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCC
Q 017953 82 RIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSH 157 (363)
Q Consensus 82 r~~~~v~v~aivNDTVaTlla~ay----~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~ 157 (363)
++| +.|.||..+..++-.+ ...+..+.+.+|||.-++++.+-. + +.+... .-.|+|..
T Consensus 97 --~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~G~-l--~~G~~g------~aGEiGh~---- 158 (321)
T 3vgl_A 97 --GLP---VVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNK-L--RRGRFG------VAAEFGHI---- 158 (321)
T ss_dssp --CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTE-E--CCCTTS------CCCCGGGS----
T ss_pred --CCC---EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcceEEEEEECCE-E--ecCCCC------CCccccce----
Confidence 554 6688999998887554 345788999999999999987411 1 111000 01233322
Q ss_pred CCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhcc-ccC-CCCC
Q 017953 158 LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAM-HHD-TSPD 235 (363)
Q Consensus 158 l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i-~~d-~~~~ 235 (363)
+..+ |- ..-.-.....+|..+||..|-+..+......... +..+... ..+ ...+
T Consensus 159 -~v~~-~g---~~c~cG~~gclE~~~S~~al~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 214 (321)
T 3vgl_A 159 -RVVP-DG---LLCGCGSQGCWEQYASGRALVRYAKQRANATPEN-------------------AAVLLGLGDGSVDGIE 214 (321)
T ss_dssp -BSST-TC---SBCTTSCBSBGGGTSSHHHHHHHHHHHHHHCGGG-------------------CHHHHHTTTSSSTTCC
T ss_pred -EecC-CC---CCCCCCCcCcHHHhcCHHHHHHHHHHHhhcCCcc-------------------hhhhhhcccCccccCC
Confidence 1110 00 0000112457999999998877666543321100 0000000 000 0112
Q ss_pred hHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHH
Q 017953 236 LRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFS 315 (363)
Q Consensus 236 ~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~ 315 (363)
...+.+...+ -+ ..|..+.+++++.+|.+|+.++...+. + .|-+.|++.+..+.|.
T Consensus 215 ~~~i~~~a~~------gD--------~~a~~~~~~~~~~La~~i~~l~~~l~p--------~--~IvlgGgi~~~~~~l~ 270 (321)
T 3vgl_A 215 GKHISEAARQ------GD--------PVAVDSFRELARWAGAGLADLASLFDP--------S--AFIVGGGVSDEGELVL 270 (321)
T ss_dssp HHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGTHHHH
T ss_pred HHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEEEeChhhcchHHHH
Confidence 2222222221 01 356678899999999999999998864 2 4667899998889999
Q ss_pred HHHHHHHHHHhC-CCCcccEEEEEc---CCchHHHHHHHH
Q 017953 316 ACMQSTVKELLG-EEVSETVVIEHS---NDGSGIGAALLA 351 (363)
Q Consensus 316 ~~~~~~l~~l~~-~~~~~~v~l~~~---~DgS~~GAAi~a 351 (363)
+.+++.+++... +.....+.+..+ +|+..+|||..+
T Consensus 271 ~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~ 310 (321)
T 3vgl_A 271 DPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLA 310 (321)
T ss_dssp HHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 999999987653 221234555554 566778887544
No 14
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.44 E-value=1.1e-05 Score=77.22 Aligned_cols=256 Identities=16% Similarity=0.188 Sum_probs=154.4
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHh
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 83 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~ 83 (363)
+.+++++.|.+.|.+++.. . .+..-+|+...=|++. ++|+++..+. + ++..+.++.+.|++.+.
T Consensus 55 ~~~~~~~~i~~~i~~~~~~-~-------~~i~gigi~~pG~vd~---~~g~v~~~~~-l--~~w~~~~l~~~l~~~~~-- 118 (321)
T 3r8e_A 55 NGIGFVESMKLEIGNFLKQ-Y-------PIVKGVGIGWPGLVSL---DRTKVILLPN-I--PSVVNVPIVEILRSEFP-- 118 (321)
T ss_dssp TTTCHHHHHHHHHHHHHHH-C-------TTCCEEEEEESSEECT---TSCCEEEBTT-B--CCCCSCCHHHHHHHHCT--
T ss_pred CHHHHHHHHHHHHHHHHhc-c-------CCeeEEEEEecccEEC---CCCEEEeCCC-C--ccccCCCHHHHHHHHcC--
Confidence 4678999999999999862 1 1223344444444542 3566654321 2 22345778777766441
Q ss_pred CCCceEEEEEeccHHhhhcccc----cCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCC
Q 017953 84 GLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLP 159 (363)
Q Consensus 84 ~~~v~v~aivNDTVaTlla~ay----~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~ 159 (363)
++| +.|.||..+..++-.+ ...+..+-+.+|||.-++.+.+-.- +.+ .--.--|||.. +
T Consensus 119 ~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~gii~~G~l---~~G------~~g~aGEiGh~-----~ 181 (321)
T 3r8e_A 119 HIH---FKIENDAKCAALGEYYFGENKRMQTFILLALGTGVGSGVMMNGKL---FIG------GRGNGTEVGHM-----L 181 (321)
T ss_dssp TSE---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEE---CCC------TTSCCCCGGGC-----B
T ss_pred CCC---EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEECCEE---ecC------CCCCCcccccc-----c
Confidence 333 6788999998777654 3457789999999999999864110 111 00112355533 1
Q ss_pred CcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHH
Q 017953 160 LTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVV 239 (363)
Q Consensus 160 ~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~ 239 (363)
..| ...+|..+|+..|-+..+..... . -+..+ . +. ..+..+...+
T Consensus 182 --~~~-----------~gclE~~~S~~al~~~~~~~~~~---~-------~~~~~----~-----~~---~~~~~~~~~i 226 (321)
T 3r8e_A 182 --TTR-----------GKSLENQVGINHLIAYTHEQLAL---D-------VAKKS----S-----LH---TIAELSPKVI 226 (321)
T ss_dssp --CTT-----------SSBSHHHHSHHHHHHHHHHHHHH---C-------TTCCC----S-----GG---GCSSCCHHHH
T ss_pred --CCC-----------CCcHHHhcCHHHHHHHHHHHhhc---c-------Ccccc----c-----cc---ccccCCHHHH
Confidence 111 45799999999886666553321 0 01100 0 00 0111122233
Q ss_pred HHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHH
Q 017953 240 GKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 319 (363)
Q Consensus 240 ~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~ 319 (363)
.+...+ -+ ..|..+.+++++.+|.+|+.++...+.. .|-+.|++.+..+.|.+.++
T Consensus 227 ~~~a~~------gD--------~~a~~~~~~~~~~La~~i~~l~~~ldP~----------~IvlgG~i~~~~~~l~~~l~ 282 (321)
T 3r8e_A 227 ADHAAQ------GD--------ALALAVWADIGTIIGESLVNIVRVMDLN----------NILLGGGISGAFDYFVPNLK 282 (321)
T ss_dssp HHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCCC----------EEEEESGGGGGHHHHHHHHH
T ss_pred HHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHHCCC----------EEEEeChhcccchHHHHHHH
Confidence 222221 11 3566788999999999999999988642 46678999988899999999
Q ss_pred HHHHHHhCCCCcccEEEEEcC---CchHHHHHHHH
Q 017953 320 STVKELLGEEVSETVVIEHSN---DGSGIGAALLA 351 (363)
Q Consensus 320 ~~l~~l~~~~~~~~v~l~~~~---DgS~~GAAi~a 351 (363)
+.+++...+.....+.+..+. |+..+|||..+
T Consensus 283 ~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 283 KAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 999877532111245666654 56788998765
No 15
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.29 E-value=3.2e-05 Score=73.83 Aligned_cols=253 Identities=18% Similarity=0.190 Sum_probs=142.7
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHh
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 83 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~ 83 (363)
+.+++++.|.+.+.++..+.. ...-+|+...=|++. ++|+++ ++ ..+...+.++.+.|++.+
T Consensus 59 ~~~~~~~~i~~~i~~~~~~~~--------~i~~igi~~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~--- 120 (327)
T 2ap1_A 59 SYSAFLDAVCELVEEADQRFG--------VKGSVGIGIPGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL--- 120 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT--------SCCEEEEEESSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---
T ss_pred CHHHHHHHHHHHHHHHHHhcC--------CccEEEEEeeeeEEC---CCCEEE-cc---CCCccCCCChHHHHHHHH---
Confidence 357788888888888776532 112355555555554 235554 22 123345678888888765
Q ss_pred CCCceEEEEEeccHHhhhccccc----CCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCC
Q 017953 84 GLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLP 159 (363)
Q Consensus 84 ~~~v~v~aivNDTVaTlla~ay~----~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~ 159 (363)
++| +.|.||..+..++-.+. ..+..+.+++|||..++++.+-.-+ .+.. -.--|||.. +
T Consensus 121 ~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~---~G~~------g~aGE~Gh~-----~ 183 (327)
T 2ap1_A 121 DRD---VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPI---TGQS------YITGEFGHM-----R 183 (327)
T ss_dssp TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEEEEEEETTEEE---CCTT------SCTTCGGGS-----B
T ss_pred CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcEEEEEEECCEEe---ecCC------CcccccccE-----E
Confidence 444 67889999988876543 4567899999999999988641100 1100 001133322 1
Q ss_pred Cccc---chhhh---ccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCC
Q 017953 160 LTEY---DEALD---TESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTS 233 (363)
Q Consensus 160 ~T~~---D~~~D---~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~ 233 (363)
..+- ...++ ..-.--....+|..+|+..|-+..+.. . . . +
T Consensus 184 ~~~~~~~~~~~~~~g~~c~cG~~gcle~~~s~~~l~~~~~~~----~------~----~----~---------------- 229 (327)
T 2ap1_A 184 LPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHY----Y------D----Q----S---------------- 229 (327)
T ss_dssp CCHHHHHHHCTTSCCCBCTTSCBSBTHHHHSHHHHHHHHHHH----H------C----C----C----------------
T ss_pred EecCcccccccccCCCcCCCCchhhHHHHhCHHHHHHHHHHh----c------C----C----C----------------
Confidence 1110 00000 000001245789889987654333221 0 0 0 0
Q ss_pred CChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHh
Q 017953 234 PDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTK 313 (363)
Q Consensus 234 ~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~ 313 (363)
.+...+.+...+ -+ ..|..+.+++++.+|.+++.++..++. + .|.+.|++....+.
T Consensus 230 ~~~~~i~~~a~~------gd--------~~a~~il~~~~~~La~~i~~l~~~l~p--------~--~IvlgG~i~~~~~~ 285 (327)
T 2ap1_A 230 LQAPEIIALWEQ------GD--------EQAHAHVERYLDLLAVCLGNILTIVDP--------D--LLVIGGGLSNFTAI 285 (327)
T ss_dssp CCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGSTHH
T ss_pred CCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEEEeChhhcchhH
Confidence 011112221211 11 345678889999999999999988864 2 36678999877665
Q ss_pred HHHHHHHHHHHHhCCCCcccEEEEEc---CCchHHHHHHHH
Q 017953 314 FSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 351 (363)
Q Consensus 314 f~~~~~~~l~~l~~~~~~~~v~l~~~---~DgS~~GAAi~a 351 (363)
|.+ +++.+++...+ ....+.+..+ ++...+|||..|
T Consensus 286 ~~~-l~~~l~~~~~~-~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 286 TTQ-LAERLPRHLLP-VARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp HHS-SGGGSGGGSCT-TCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred HHH-HHHHHHHhhcc-ccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 555 77777655433 2235666654 467788988654
No 16
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.25 E-value=0.00011 Score=69.82 Aligned_cols=252 Identities=17% Similarity=0.174 Sum_probs=148.9
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHhCC
Q 017953 6 HELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGL 85 (363)
Q Consensus 6 ~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~~ 85 (363)
+++++.|++.+.+++.+... +..-+|+...=|++. ++|.+.. .-. .++..+.++.+.|++.+ ++
T Consensus 37 ~~~~~~i~~~i~~~~~~~~~-------~i~gigi~~pG~vd~---~~g~v~~-~~~--~~~w~~~~l~~~l~~~~---~~ 100 (302)
T 3vov_A 37 ERVAEALAEAAERAEREAGV-------RGEAIGLGTPGPLDF---RRGVIRF-APN--IPGVQDFPIRRILEEAT---GR 100 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-------CCSSEEEEESSCEET---TTTEEC----C--CTTCTTCCHHHHHHHHH---SS
T ss_pred HHHHHHHHHHHHHHHhhccC-------CceEEEEEecccEeC---CCCEEEc-CCC--CCCcCCCChHHHHHHhh---CC
Confidence 78999999999999876421 223355555445554 3455542 221 22345678888887765 45
Q ss_pred CceEEEEEeccHHhhhcccc----cCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCCCc
Q 017953 86 DMRVAALVNDTIGTLAGGRY----HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLT 161 (363)
Q Consensus 86 ~v~v~aivNDTVaTlla~ay----~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~~T 161 (363)
| +.|.||..+..++-.+ ...+..+-+.+|||.-++++.+- ++ +.+... .--|+|.. +..
T Consensus 101 p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~g-~l--~~G~~g------~aGEiGh~-----~v~ 163 (302)
T 3vov_A 101 P---VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGG-RV--LRGERG------QGGELGHL-----TLL 163 (302)
T ss_dssp C---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEETT-EE--CCCTTS------CTTCGGGS-----BSS
T ss_pred C---EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCceeEEEEECC-EE--eeCCCC------CCccccce-----Eec
Confidence 4 5678999988777655 34577899999999999998641 11 111000 00133322 111
Q ss_pred ccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHHHH
Q 017953 162 EYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGK 241 (363)
Q Consensus 162 ~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~ 241 (363)
+ |- ..-.-.....+|..+||..|-+..+... + . + + +...+.+
T Consensus 164 ~-~g---~~c~cg~~gclE~~~s~~~l~~~~~~~~----------~----~----~--~--------------~~~~i~~ 205 (302)
T 3vov_A 164 P-GG---PACGCGLEGCLEALAAGRALERDATYAF----------Q----R----P--V--------------DTRELFR 205 (302)
T ss_dssp T-TC---CBCTTSCBSBHHHHHSHHHHHHHHHHHH----------T----S----C--C--------------CHHHHHH
T ss_pred C-CC---CCCCCCCcchHHHHhCHHHHHHHHHHhh----------C----C----C--C--------------CHHHHHH
Confidence 0 00 0000112357899999977655443311 0 0 0 0 1112222
Q ss_pred HHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceee-cccHhHHHHHHH
Q 017953 242 KLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLF-EHYTKFSACMQS 320 (363)
Q Consensus 242 il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~-~~~p~f~~~~~~ 320 (363)
...+ -+ ..+..+.+++++.++.+++.++...+. + .|-+.|++. ...|.|.+.+++
T Consensus 206 ~a~~------gd--------~~a~~~~~~~~~~l~~~i~~l~~~~~p--------~--~ivlgG~i~~~~~~~l~~~l~~ 261 (302)
T 3vov_A 206 LFQA------GD--------PKAERLVLQAARYVGIGLASLVKAFDP--------G--VVVLGGGVALNAPEGYWEALLE 261 (302)
T ss_dssp HHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESHHHHTSCHHHHHHHHH
T ss_pred HHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEeChhHhhhhHHHHHHHHH
Confidence 2211 01 345678899999999999999988864 2 466789999 888999999999
Q ss_pred HHHHHhCCCCcccEEEE-EcCCchHHHHHHHHH
Q 017953 321 TVKELLGEEVSETVVIE-HSNDGSGIGAALLAA 352 (363)
Q Consensus 321 ~l~~l~~~~~~~~v~l~-~~~DgS~~GAAi~aa 352 (363)
.+++...+.....|..- +.+|+..+|||..+.
T Consensus 262 ~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 262 AYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 99987543222233322 345677889987763
No 17
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.25 E-value=0.00012 Score=70.48 Aligned_cols=265 Identities=18% Similarity=0.184 Sum_probs=146.0
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecc--eecccCCceEEEecccceecCCCCCCcHHHHHHHHHH
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAME 81 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP--~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~ 81 (363)
+.+++++.+.+.+.+++.+.... ..-.+|+.+|.| ++. ++|+++.-+. + .++-.+.++.+.|++.+
T Consensus 64 ~~~~~~~~i~~~i~~~~~~~~~~------~~~i~gigi~~pG~vd~---~~g~v~~~~~-~-~~~w~~~~l~~~l~~~~- 131 (343)
T 2yhw_A 64 TYEERINLILQMCVEAAAEAVKL------NCRILGVGISTGGRVNP---REGIVLHSTK-L-IQEWNSVDLRTPLSDTL- 131 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHT------TEEEEEEEEEESSEEET---TTTEEEECCT-T-SSSCSSEECHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHhcccc------cCceEEEEEecccCEeC---CCCEEEeCCc-C-CCCCcCCCHHHHHHHHH-
Confidence 35678899999999998764311 112345555655 443 3466653221 1 01223567888887765
Q ss_pred HhCCCceEEEEEeccHHhhhccccc----CCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCC
Q 017953 82 RIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSH 157 (363)
Q Consensus 82 r~~~~v~v~aivNDTVaTlla~ay~----~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~ 157 (363)
++| +.|.||..+..++-.+. ..+..+-+++|||..++++.+-.- +.+.. -.=-|||..
T Consensus 132 --~~p---v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGiG~gii~~G~l---~~G~~------g~aGEiGh~---- 193 (343)
T 2yhw_A 132 --HLP---VWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHEL---IHGSS------FCAAELGHL---- 193 (343)
T ss_dssp --CSC---EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSEEEEEEETTEE---CCCTT------SCTTCGGGC----
T ss_pred --CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCEEEEEEECCEE---ecCCC------CcccccCCE----
Confidence 454 56889999998876542 446789999999999998864110 11100 011244432
Q ss_pred CCCcccchhhhccCCCCC-cceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCCh
Q 017953 158 LPLTEYDEALDTESLNPG-EQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDL 236 (363)
Q Consensus 158 l~~T~~D~~~D~~s~~pg-~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~ 236 (363)
+. |. +...-..| ...+|..+|+..|-+.++... ... +..+.. .... .++..+.
T Consensus 194 -~~---~~--~g~~c~cG~~gclE~~~s~~al~~~~~~~~----~~~-------~~~~~~-~~~~--------~~~~~~~ 247 (343)
T 2yhw_A 194 -VV---SL--XGPDCSCGSHGCIEAYASGMALQREAKKLH----DED-------LLLVEG-MSVP--------KDEAVGA 247 (343)
T ss_dssp -BC---CC----CBCTTSCBSBHHHHHSHHHHHHHHHHHH----HTT-------CSCCTT-CCC------------CCCH
T ss_pred -EE---cc--CCCcCCCCCCCcHHHhcCHHHHHHHHHHhh----ccc-------cccccc-cccc--------ccccCCH
Confidence 11 10 00000112 237899999877765554322 110 000000 0000 0001112
Q ss_pred HHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHH
Q 017953 237 RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 316 (363)
Q Consensus 237 ~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~ 316 (363)
..+.+...+ -+ ..|..+.+++++.+|.+++.++...+. + .|.+.|++. +.|.+
T Consensus 248 ~~v~~~a~~------gd--------~~a~~il~~~~~~La~~i~~l~~~l~P--------~--~IvlgG~i~---~~~~~ 300 (343)
T 2yhw_A 248 LHLIQAAKL------GN--------AKAQSILRTAGTALGLGVVNILHTMNP--------S--LVILSGVLA---SHYIH 300 (343)
T ss_dssp HHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHTCC--------S--EEEEESTTH---HHHHH
T ss_pred HHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEEEeCCcH---HHHHH
Confidence 222222211 11 346678899999999999999988753 2 366789885 57888
Q ss_pred HHHHHHHHHhCCCCcccEEEEE--cCCchHHHHHHHHH
Q 017953 317 CMQSTVKELLGEEVSETVVIEH--SNDGSGIGAALLAA 352 (363)
Q Consensus 317 ~~~~~l~~l~~~~~~~~v~l~~--~~DgS~~GAAi~aa 352 (363)
.+++.+++...+. ...+.+.. ..|...+|||..+.
T Consensus 301 ~l~~~l~~~~~~~-~~~~~i~~s~~~~~~~~GAa~l~~ 337 (343)
T 2yhw_A 301 IVKDVIRQQALSS-VQDVDVVVSDLVDPALLGAASMVL 337 (343)
T ss_dssp HHHHHHHHHSCGG-GTTCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcccc-cCCcEEEEccCCCchHHHHHHHHH
Confidence 8888887653221 12344444 36677889987663
No 18
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.18 E-value=0.00011 Score=70.47 Aligned_cols=251 Identities=18% Similarity=0.169 Sum_probs=146.6
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecc--eecccCCceEEEecccceecCCCCCCcHHHHHHHHHH
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAME 81 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP--~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~ 81 (363)
+.+++++.|.+.|.+++.+.. ...|+.++.| ++. .+|++. ++ . .+...+.++.+.|++.+
T Consensus 59 ~~~~~~~~i~~~i~~~~~~~~----------~~~gigi~~pG~vd~---~~g~v~-~~-~--~~~~~~~~l~~~l~~~~- 120 (327)
T 4db3_A 59 DYPLLLETIAGLVAKYDQEFA----------CEGKIGLGLPGMEDA---DDATVL-TV-N--VPAAKGKPLRADLEAKI- 120 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT----------SCCEEEEEESEEECT---TTCCEE-ES-S--SGGGTTSCHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHhcC----------CccEEEEEeeccEeC---CCCEEE-cC-C--CccccCCCHHHHHHHHH-
Confidence 467888888888888876642 1345555555 442 356553 33 1 22234678888888766
Q ss_pred HhCCCceEEEEEeccHHhhhccccc----CCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCC
Q 017953 82 RIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSH 157 (363)
Q Consensus 82 r~~~~v~v~aivNDTVaTlla~ay~----~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~ 157 (363)
++| +.|.||..+..++-.+. ..+..+.+.+|||..++++.+-. + +.+.. -.-.|+|..
T Consensus 121 --~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGiG~gii~~G~-l--~~G~~------g~aGEiGh~---- 182 (327)
T 4db3_A 121 --GRS---VKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYEGK-V--FSGRN------NVAGELGHM---- 182 (327)
T ss_dssp --SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSEEEEEEETTE-E--CCCTT------SCTTCGGGS----
T ss_pred --CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccceEEEEECCE-E--eecCC------CcCcccccE----
Confidence 555 56779999988877653 45678999999999999987411 1 11100 001233322
Q ss_pred CCCcccch-----hhhc-cCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccC
Q 017953 158 LPLTEYDE-----ALDT-ESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHD 231 (363)
Q Consensus 158 l~~T~~D~-----~~D~-~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d 231 (363)
+....+. +.+. .-.--..-.+|.++||..|-+..+... . +
T Consensus 183 -~v~~~~~~~~~~~~~g~~C~cG~~gclE~~~S~~al~~~~~~~~----------~----~------------------- 228 (327)
T 4db3_A 183 -RLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLSGRGFELLYAHYY----------G----E------------------- 228 (327)
T ss_dssp -BCCHHHHHHTCTTCCCCBCTTSCBSBGGGTSSHHHHHHHHHHHH----------S----C-------------------
T ss_pred -EeccccccccccccCCCcCCCCCcchhHhhhCHHHHHHHHHHhc----------C----C-------------------
Confidence 2211100 0010 000112467899999987755443310 0 0
Q ss_pred CCCChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeeccc
Q 017953 232 TSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHY 311 (363)
Q Consensus 232 ~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~ 311 (363)
..+...+.+...+ - | ..|..+.+++++..|.+|+.++...+. + .|-+.|++...
T Consensus 229 -~~~~~~i~~~a~~------g---D-----~~a~~~~~~~~~~La~~i~~l~~~l~p--------~--~IvlgGgi~~~- 282 (327)
T 4db3_A 229 -EKKAIDIIKANAA------G---D-----EKAAEHVERFMELLAICFGNIFTANDP--------H--VVALGGGLSNF- 282 (327)
T ss_dssp -CCCHHHHHHHHHH------T---C-----HHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGC-
T ss_pred -CCCHHHHHHHHHc------C---C-----HHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEEEeCcccch-
Confidence 0011222222221 0 1 345678899999999999999998864 2 35567887764
Q ss_pred HhHHHHHHHHHHHHhCCCCcccEEEEEc---CCchHHHHHHHH
Q 017953 312 TKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 351 (363)
Q Consensus 312 p~f~~~~~~~l~~l~~~~~~~~v~l~~~---~DgS~~GAAi~a 351 (363)
+.|.+.+++.+++.+.+. ...++++.+ +|+..+|||..+
T Consensus 283 ~~l~~~l~~~l~~~~~~~-~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 283 ELIYEEMPKRVPKYLLSV-AKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp THHHHHHHHHGGGGSCTT-CCCCEEEECSCGGGHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccc-cCCCEEEECCCCCcHHHHHHHHHH
Confidence 678888888887764332 135666655 466778887653
No 19
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=98.00 E-value=9.7e-05 Score=69.04 Aligned_cols=241 Identities=17% Similarity=0.123 Sum_probs=135.5
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHhC
Q 017953 5 SHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG 84 (363)
Q Consensus 5 ~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~ 84 (363)
.+++++.|.+.+.+++.+ ..-+|+...=|++. ++|+++ ++-.+ ++..+.++.+.|++.+ +
T Consensus 38 ~~~~~~~i~~~i~~~~~~-----------~~~igi~~pG~vd~---~~g~v~-~~~~~--~~w~~~~l~~~l~~~~---~ 97 (289)
T 2aa4_A 38 PEALRDALSALVSPLQAH-----------AQRVAIASTGIIRD---GSLLAL-NPHNL--GGLLHFPLVKTLEQLT---N 97 (289)
T ss_dssp HHHHHHHHHHHHTTTGGG-----------CSEEEEEESSEEET---TEEECS-SGGGG--GGGTTCCHHHHHHHHH---C
T ss_pred HHHHHHHHHHHHHHHHhh-----------CCEEEEEeccceeC---CCCEEE-eCCCC--CcccCCChHHHHHHHH---C
Confidence 566777777666655432 11255555555654 234443 33222 1223567888887765 4
Q ss_pred CCceEEEEEeccHHhhhccccc----CCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCCC
Q 017953 85 LDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPL 160 (363)
Q Consensus 85 ~~v~v~aivNDTVaTlla~ay~----~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~~ 160 (363)
+| +.|.||..+..++-.+. +. ..+-+++|||..++++.+-.- +.+. --.--|||..-- -|.
T Consensus 98 ~p---v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtGiG~gii~~G~l---~~G~------~g~aGE~Gh~~~--~~~ 162 (289)
T 2aa4_A 98 LP---TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTGVGGGVVSGCKL---LTGP------GGLAGHIGHTLA--DPH 162 (289)
T ss_dssp SC---EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSSEEEEEEETTEE---ECCT------TSCCCCGGGSBS--CTT
T ss_pred CC---EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCccEEEEEEECCEE---eeCC------CCCCccCCcEEE--CCC
Confidence 44 66889999988876543 33 789999999999998863110 0110 001235553310 000
Q ss_pred cccchhhhccCCCCC-cceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHH
Q 017953 161 TEYDEALDTESLNPG-EQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVV 239 (363)
Q Consensus 161 T~~D~~~D~~s~~pg-~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~ 239 (363)
... -.-| ...+|...|+..|- +..+. + . + ..+...+
T Consensus 163 g~~--------c~cG~~gcle~~~s~~~l~--------~~~~~--~-~---~---------------------~~~~~~v 199 (289)
T 2aa4_A 163 GPV--------CGCGRTGCVEAIASGRGIA--------AAAQG--E-L---A---------------------GADAKTI 199 (289)
T ss_dssp SCB--------CTTSCBSBHHHHHSHHHHH--------HTCCG--G-G---T---------------------TCCHHHH
T ss_pred CCc--------CCCCCchhHHHHhCHHHHH--------HHHHH--h-c---c---------------------CCCHHHH
Confidence 000 0112 24678888875431 11100 0 0 0 0112222
Q ss_pred HHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHH
Q 017953 240 GKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 319 (363)
Q Consensus 240 ~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~ 319 (363)
.+...+ -+ ..|..+.+++++.++.+++.++..++. + .|.+.|++. ..|.|.+.++
T Consensus 200 ~~~a~~------gd--------~~a~~i~~~~~~~L~~~i~~l~~~l~p--------~--~ivlgG~~~-~~~~~~~~l~ 254 (289)
T 2aa4_A 200 FTRAGQ------GD--------EQAQQLIHRSARTLARLIADIKATTDC--------Q--CVVVGGSVG-LAEGYLALVE 254 (289)
T ss_dssp HHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEEHHHH-TSTTHHHHHH
T ss_pred HHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEeCccc-ccHHHHHHHH
Confidence 222221 01 346678899999999999999988864 2 366789998 6788999999
Q ss_pred HHHHHHhCCCCcccEEEEE---cCCchHHHHHHHH
Q 017953 320 STVKELLGEEVSETVVIEH---SNDGSGIGAALLA 351 (363)
Q Consensus 320 ~~l~~l~~~~~~~~v~l~~---~~DgS~~GAAi~a 351 (363)
+.+++...+ ..+.+.. .+|...+|||..+
T Consensus 255 ~~l~~~~~~---~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 255 TYLAQEPAA---FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHTTSCGG---GCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHhcCc---cCCEEEECCCCCchHHHHHHHHH
Confidence 888765222 1334443 4567889998765
No 20
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.87 E-value=0.00032 Score=68.36 Aligned_cols=256 Identities=13% Similarity=0.047 Sum_probs=142.7
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecc--eecccCCceEEEecccceecCCCCCC-cHHHHHHHHH
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAM 80 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP--~~qt~~~~g~Li~wtKgF~~~~v~G~-dv~~lL~~al 80 (363)
+.+++++.|++.+.++..... . -.+|+.++.| ++. |++. .. .++..+. ++.+++++
T Consensus 67 ~~~~~~~~i~~~i~~~~~~~~-------~--~i~gigi~~pG~vd~-----g~v~-~~----~~~~~~~~~l~~~l~~-- 125 (373)
T 2q2r_A 67 DITEIIEFFNEIIELMPASVM-------K--RVKAGVINVPGPVTG-----GAVG-GP----FNNLKGIARLSDYPKA-- 125 (373)
T ss_dssp BGGGHHHHHHHHHHHSCHHHH-------T--TEEEEEEEESSCEET-----TTEE-CC----CSSSBSCEEGGGSCTT--
T ss_pred CHHHHHHHHHHHHHHHhhccc-------c--cccEEEEEeeccccC-----CEEe-cc----CCCCCCcCCHHHHHHH--
Confidence 356777777777766543310 1 1345555555 444 4443 11 1122232 44444432
Q ss_pred HHhCCCceEEEEEeccHHhhhc---------------ccc----------------cCCCceEEEEeeccceeeeEcccC
Q 017953 81 ERIGLDMRVAALVNDTIGTLAG---------------GRY----------------HNKDAIAAVILGTGTNAAYVERAH 129 (363)
Q Consensus 81 ~r~~~~v~v~aivNDTVaTlla---------------~ay----------------~~~~~~iGlIlGTGtNacy~e~~~ 129 (363)
.+++..+.|.||..+..++ -.+ ...+..+-+++|||..++++.+-
T Consensus 126 ---~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g- 201 (373)
T 2q2r_A 126 ---LFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYN- 201 (373)
T ss_dssp ---TSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEEC-
T ss_pred ---hcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecC-
Confidence 1334346789999998888 232 23467899999999999998741
Q ss_pred CCCcccCCCCCCCceEEEeeccCccCCCCCCc--ccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCC
Q 017953 130 AIPKWHGLLPKSGEMVINMEWGNFRSSHLPLT--EYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFG 207 (363)
Q Consensus 130 ~i~k~~~~~~~~~~miINtEwG~fg~~~l~~T--~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~ 207 (363)
++ ..+....-.|||..--+ +.. .....+-.... +.-.+|.++||..|-++.+... .+
T Consensus 202 ---~l-----~~G~~~~aGE~Gh~~~~--~~~~c~cg~~l~~~~~--~~g~lE~~~S~~~l~~~~~~~~-----~~---- 260 (373)
T 2q2r_A 202 ---PP-----MNQHIVVPLELGSQTLP--MRKDIDYIQTLHAELK--LFPNYENMVSGAGLEFHYRQVV-----RG---- 260 (373)
T ss_dssp ---C--------CEEEEEECGGGSBCC--CSSCHHHHHHHHHHHT--SCCBHHHHSSHHHHHHHHHHHH-----TT----
T ss_pred ---cc-----cCCCcccccccceeecC--CCCCcchhHHHHHHhh--ccccHhHhcCHHHHHHHHHHHh-----cC----
Confidence 11 12445666788865211 111 11111111100 2467899999988876555321 00
Q ss_pred CCCCCCCCCCCccCchhhhccccCCCCChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Q 017953 208 DTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLG 287 (363)
Q Consensus 208 ~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~ 287 (363)
. ++ .. +...+.+...+ -+ ..|..+.+++++..+.+++.++..++
T Consensus 261 -~-~~------~~--------------~~~~i~~~a~~------gD--------~~a~~~l~~~~~~L~~~i~~l~~~l~ 304 (373)
T 2q2r_A 261 -S-RP------PC--------------SAGEIAKLASE------GD--------ANACKAMKKYHEYLMRVGSEASMALL 304 (373)
T ss_dssp -S-SC------CC--------------CHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -C-CC------CC--------------CHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 0 10 00 11112221111 01 35667889999999999999999986
Q ss_pred CCCcCCCCCceEEEEEeceeecccHhHHH--HHHHHHHHHhCCCC--------cccEEEE-EcCCchHHHHHHHH
Q 017953 288 RDTVRDGEKQKSVIALDGGLFEHYTKFSA--CMQSTVKELLGEEV--------SETVVIE-HSNDGSGIGAALLA 351 (363)
Q Consensus 288 ~~~~~~~~~~~v~V~vdGS~~~~~p~f~~--~~~~~l~~l~~~~~--------~~~v~l~-~~~DgS~~GAAi~a 351 (363)
. . .|.+-|+.+.+.+.|.+ .+++.+++.+-+.. ...|.+. +.+|...+|||..+
T Consensus 305 p---------~-~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~ 369 (373)
T 2q2r_A 305 P---------L-TIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCG 369 (373)
T ss_dssp C---------S-EEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHH
T ss_pred C---------C-EEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHH
Confidence 4 2 36677885555588888 77777776533211 1234443 45688899998765
No 21
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.77 E-value=0.0026 Score=59.92 Aligned_cols=225 Identities=15% Similarity=0.162 Sum_probs=129.2
Q ss_pred cceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHhCCCceEEEEEeccHHhhhcccc----cCCCce
Q 017953 36 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAI 111 (363)
Q Consensus 36 ~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~~~v~v~aivNDTVaTlla~ay----~~~~~~ 111 (363)
-+|+...=|++. ++|+++.-. . .++..+.++.+.|++.+ ++| +.|.||.-+..++-.+ ...+..
T Consensus 59 gigi~~pG~vd~---~~g~v~~~~-~--l~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~ 126 (297)
T 4htl_A 59 GIAVSAPGYVNP---KTGLITMGG-A--IRRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDF 126 (297)
T ss_dssp EEEEEESSEECT---TTCEEEECT-T--CGGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSE
T ss_pred EEEEecCcceeC---CCCEEEeCC-C--CCCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcE
Confidence 344444445543 356665322 1 12234568888887665 555 6788999888777654 356788
Q ss_pred EEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCCCcccchhhhccCCCCCcceeeeeccccchHHH
Q 017953 112 AAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEI 191 (363)
Q Consensus 112 iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl 191 (363)
+.+.+|||.-++++.+= ++ +.+.. -.--|+|.. +. |. .....++...+|..+|+..|-+.
T Consensus 127 ~~l~~GtGiG~giv~~G-~l--~~G~~------g~aGEiGh~-----~~---~~---~~~~~~~~~~le~~~s~~~l~~~ 186 (297)
T 4htl_A 127 LCLTIGTGIGGGIFSNG-EL--VRGGR------FRAGEFGYM-----FS---ER---PGAFRPGKYTLNETTTMLVLRRQ 186 (297)
T ss_dssp EEEEESSSEEEEEEETT-EE--CCCTT------SCCCCGGGS-----BS---SC---CCSSCGGGGBHHHHSSHHHHHHH
T ss_pred EEEEECcceEEEEEECC-EE--EecCC------CCcccccce-----Ee---cC---CCCcCcccCcHHHhccHHHHHHH
Confidence 99999999999998641 11 11100 001234432 11 10 00112455678888888766443
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHh
Q 017953 192 VRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRG 271 (363)
Q Consensus 192 ~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RA 271 (363)
.+... . .+. ..+ +...+.+...+ -+ ..|..+.+++
T Consensus 187 ~~~~~-------~-----~~~-----~~~--------------~~~~i~~~a~~------gd--------~~a~~~~~~~ 221 (297)
T 4htl_A 187 YAELT-------G-----RPL-----EEI--------------TGEEIFANYDA------HD--------AVSERLITEF 221 (297)
T ss_dssp HHHHH-------C-----CCG-----GGC--------------CHHHHHHHHHT------TC--------HHHHHHHHHH
T ss_pred HHHHh-------c-----CCc-----cCC--------------CHHHHHHHHHc------CC--------HHHHHHHHHH
Confidence 33211 0 010 000 11122222211 01 3466788999
Q ss_pred hHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEE---cCCchHHHHH
Q 017953 272 ARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH---SNDGSGIGAA 348 (363)
Q Consensus 272 A~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~---~~DgS~~GAA 348 (363)
++.+|.+|+.++...+. + .|-+.|++.+ .|.|.+.+++.++.... ..+.++. -+|+..+|||
T Consensus 222 ~~~La~~i~~l~~~~~p--------~--~IvlgGgi~~-~~~~~~~l~~~l~~~~~----~~~~i~~s~lg~~a~~~GAa 286 (297)
T 4htl_A 222 YTGICTGLYNLIYLFDP--------T--HIFIGGGITS-RPTFIAELKHHMESFGL----RDTIIETATHKNQAGLLGAV 286 (297)
T ss_dssp HHHHHHHHHHHHHHHCC--------S--EEEEESGGGG-STTHHHHHHHHHTTTCC----TTCEEEECSCTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC--------C--EEEEeCcccc-cHHHHHHHHHHHHHhcc----CCCeEEECCcCChHHHHhHH
Confidence 99999999999988864 2 3667898886 47888888888875432 2344443 4577889998
Q ss_pred HHHH
Q 017953 349 LLAA 352 (363)
Q Consensus 349 i~aa 352 (363)
..+.
T Consensus 287 ~l~~ 290 (297)
T 4htl_A 287 YHFL 290 (297)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 22
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.62 E-value=0.0025 Score=62.38 Aligned_cols=234 Identities=14% Similarity=0.089 Sum_probs=133.9
Q ss_pred ChhhhHHHHHH---HHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCC-CCcHHHHHHHH
Q 017953 4 SSHELFDYIAA---ALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV-GEDVVGELTKA 79 (363)
Q Consensus 4 ~~~~lFd~iA~---~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~-G~dv~~lL~~a 79 (363)
+.+++++.|++ .+.+++. .+..-+|+.+.=|++. ++|++.. +-.+ ++.. |.++.+.|++.
T Consensus 44 ~~~~~l~~i~~~~~~i~~~~~----------~~i~gIGIavPG~Vd~---~~G~i~~-~~nl--p~w~~~~~l~~~L~~~ 107 (366)
T 3mcp_A 44 CLDKCLGNLVEGFKAIQAGLP----------EAPVAISFAFPGPADY---QAGIIGD-LPNF--PSFRGGVALGPFLEDI 107 (366)
T ss_dssp CHHHHHHHHHHHHHHHHTTCS----------SCCCEEEEECCSSEET---TTTEECC-CTTC--GGGTTCBCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhh----------cCCeEEEEEecceEeC---CCCEEEe-CCCc--ccccCCCCHHHHHHHH
Confidence 46777777777 5544432 1123345555555654 3566643 2222 2233 67888888876
Q ss_pred HHHhCCCceEEEEEeccHHhhhccccc-----------------CCCceEEEEeeccceeeeEcccCCCCcccCCCCCCC
Q 017953 80 MERIGLDMRVAALVNDTIGTLAGGRYH-----------------NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSG 142 (363)
Q Consensus 80 l~r~~~~v~v~aivNDTVaTlla~ay~-----------------~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~ 142 (363)
+ ++| +.|.||.-+..++-.+. ..+..+.+-+|||.-++.+.+-. + +.+...
T Consensus 108 ~---g~P---V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~-l--~~G~~g--- 175 (366)
T 3mcp_A 108 F---GIP---VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGE-L--LRGDNA--- 175 (366)
T ss_dssp H---CSC---EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSSEEEEEEETTE-E--CCCTTS---
T ss_pred H---CCC---EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCcceEEEEECCE-E--ecCCCC---
Confidence 6 555 67889998887765443 35778999999999999986411 1 111000
Q ss_pred ceEEEeeccCccCCCCCCcccchhhhccCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCc
Q 017953 143 EMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRT 222 (363)
Q Consensus 143 ~miINtEwG~fg~~~l~~T~~D~~~D~~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t 222 (363)
.-.|+| +++ | .--....+|-.+||..|-+..+... . . +
T Consensus 176 ---~AGEiG-----H~~----~-------~CG~~GclE~~~S~~al~~~~~~~~----------~-~-~----------- 213 (366)
T 3mcp_A 176 ---AGGYVW-----CLR----N-------KKYPEYIVEESVSIRAVMRVYAERS----------G-D-A----------- 213 (366)
T ss_dssp ---CTTCCT-----TSB----C-------SSCTTSBGGGTSSHHHHHHHHHHHS----------S-C-C-----------
T ss_pred ---CCceee-----ccc----C-------CCCCCcceeeeecHHHHHHHHHHhh----------C-C-C-----------
Confidence 001222 222 2 1122467899999988766544311 0 0 0
Q ss_pred hhhhccccCCCCChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEE
Q 017953 223 PHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIA 302 (363)
Q Consensus 223 ~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~ 302 (363)
+..+...+.+.... ...-+ + ..|..+.+++++..|.+++.++..++ + .|-
T Consensus 214 ---------~~~~~~~i~~~a~~---~~~gD--~-----~~a~~~l~~~~~~Lg~~i~nl~~~ld----------P-~Iv 263 (366)
T 3mcp_A 214 ---------GARTPKEIFEIAEG---IRPGN--R-----EAAIAAFEELGEMAGDALASAITLID----------G-LIV 263 (366)
T ss_dssp ---------SCCCHHHHHHHHHT---SSCSC--H-----HHHHHHHHHHHHHHHHHHHHHHHHHC----------S-EEE
T ss_pred ---------CCCCHHHHHHHHhh---hhcCC--H-----HHHHHHHHHHHHHHHHHHHHHHHHHC----------C-EEE
Confidence 00112222222210 00011 0 34567889999999999999988874 3 677
Q ss_pred EeceeecccHhHHHHHHHHHHHHhCCCCcccEEEE
Q 017953 303 LDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE 337 (363)
Q Consensus 303 vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~ 337 (363)
+.|++....+.|.+.+++.+++.+-+.....+.+.
T Consensus 264 iGGgi~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~ 298 (366)
T 3mcp_A 264 IGGGLSGASKYILPVLLKEMNAQTGMMDGARFGRL 298 (366)
T ss_dssp EESGGGGGHHHHHHHHHHHHHHHTTCC--------
T ss_pred EEChhhhchHHHHHHHHHHHHHhcchhccCCceEE
Confidence 89999988999999999999987544323344443
No 23
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.61 E-value=0.0056 Score=57.05 Aligned_cols=222 Identities=18% Similarity=0.153 Sum_probs=123.7
Q ss_pred cceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHhCCCceEEEEEeccHHhhhcccc--cCCCceEE
Q 017953 36 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HNKDAIAA 113 (363)
Q Consensus 36 ~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~~~v~v~aivNDTVaTlla~ay--~~~~~~iG 113 (363)
-+|+...=|++. ++|++.. +..+. ...+.++.+.| +. .++| +.|.||..+..++-.+ ...+..+-
T Consensus 57 gigi~~pG~vd~---~~g~v~~-~~~~~--~~~~~~l~~~l-~~---~~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~ 123 (292)
T 2gup_A 57 GIAMSVPGAVNQ---ETGVIDG-FSAVP--YIHGFSWYEAL-SS---YQLP---VHLENDANCVGLSELLAHPELENAAC 123 (292)
T ss_dssp EEEEEESSEECT---TTCBEES-CCSSG--GGSSSBHHHHT-GG---GCCC---EEEEEHHHHHHHHHHHHCTTCSSEEE
T ss_pred EEEEEecCcccC---CCCEEEe-cCCCC--cccCCCHHHHH-HH---cCCC---EEEechHHHHHHHHHHhcCCCCeEEE
Confidence 345444444554 2455542 22221 11245666666 43 3554 5678999998887644 34567899
Q ss_pred EEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCCCcccchhhhccCCCC-CcceeeeeccccchHHHH
Q 017953 114 VILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNP-GEQIFEKIISGMYLGEIV 192 (363)
Q Consensus 114 lIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~~T~~D~~~D~~s~~p-g~q~~EkmvsG~YLGEl~ 192 (363)
+.+|||..++.+.+-.- +.+.. -.--|||. ++. |. .+ +...+|...|+..|-+.+
T Consensus 124 l~~GtGiG~giv~~G~l---~~G~~------g~aGEiGh-----~~~---~~-------~~~~~gcle~~~s~~~l~~~~ 179 (292)
T 2gup_A 124 VVIGTGIGGAMIINGRL---HRGRH------GLGGEFGY-----MTT---LA-------PAEKLNNWSQLASTGNMVRYV 179 (292)
T ss_dssp EEESSSEEEEEEETTEE---ECCTT------SCTTCGGG-----CBS---SC-------CSSSCCBHHHHHSHHHHHHHH
T ss_pred EEECCceEEEEEECCEE---EecCC------CCCcccee-----EEe---cc-------CCCCCCcHHHhcCHHHHHHHH
Confidence 99999999998853110 01100 00013332 221 11 11 235678888876553322
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhh
Q 017953 193 RRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGA 272 (363)
Q Consensus 193 R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA 272 (363)
+.. . . . + .+ +...+.+...+ -+ ..|..+.++++
T Consensus 180 ~~~---~----~----~-~-------~~--------------~~~~v~~~a~~------gd--------~~a~~i~~~~~ 212 (292)
T 2gup_A 180 IEK---S----G----H-T-------DW--------------DGRKIYQEAAA------GN--------ILCQEAIERMN 212 (292)
T ss_dssp HHH---H----S----S-C-------CC--------------CHHHHHHHHHT------TC--------HHHHHHHHHHH
T ss_pred HHh---h----C----C-C-------CC--------------CHHHHHHHHHc------CC--------HHHHHHHHHHH
Confidence 211 0 0 0 0 00 11122222211 01 34667889999
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCC----CcccEEEE-EcCCchHHHH
Q 017953 273 RLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEE----VSETVVIE-HSNDGSGIGA 347 (363)
Q Consensus 273 ~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~----~~~~v~l~-~~~DgS~~GA 347 (363)
+.+|.+++.++..++. + .|.+.|++. ..|.|.+.+++.+++...+. ....|.+- +.+|...+||
T Consensus 213 ~~L~~~i~~l~~~l~p--------~--~IvlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GA 281 (292)
T 2gup_A 213 RNLAQGLLNIQYLIDP--------G--VISLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGA 281 (292)
T ss_dssp HHHHHHHHHHHHHHCC--------S--EEEEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCC--------C--EEEEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHH
Confidence 9999999999998864 2 366789885 57889999999888764321 11234432 4567788999
Q ss_pred HHHHH
Q 017953 348 ALLAA 352 (363)
Q Consensus 348 Ai~aa 352 (363)
|..+.
T Consensus 282 a~~~~ 286 (292)
T 2gup_A 282 LVNWL 286 (292)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 24
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.55 E-value=0.0062 Score=56.95 Aligned_cols=73 Identities=22% Similarity=0.375 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCC
Q 017953 262 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSND 341 (363)
Q Consensus 262 ~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~D 341 (363)
..|..+.+++++..|.+++.++..++. + .|.+.|++... +.|.+.+++.+.+. .|..-..++
T Consensus 214 ~~a~~il~~~~~~La~~i~~l~~~l~p--------~--~IvlgGgv~~~-~~~~~~l~~~~~~~-------~i~~~~~~~ 275 (299)
T 2e2o_A 214 TVAMDILKQGAELLASQAVYLARKIGT--------N--KVYLKGGMFRS-NIYHKFFTLYLEKE-------GIISDLGKR 275 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--------S--EEEEESGGGGS-HHHHHHHHHHHHHT-------TCEEECCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEECCccCc-HHHHHHHHHHCCCC-------eEeccCCCC
Confidence 456788999999999999999998853 2 46678999988 88888888877654 233222347
Q ss_pred chHHHHHHHHH
Q 017953 342 GSGIGAALLAA 352 (363)
Q Consensus 342 gS~~GAAi~aa 352 (363)
.+.+|||..+.
T Consensus 276 ~~~~GAa~la~ 286 (299)
T 2e2o_A 276 SPEIGAVILAY 286 (299)
T ss_dssp CHHHHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 88999998774
No 25
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.30 E-value=0.0095 Score=56.48 Aligned_cols=104 Identities=17% Similarity=0.188 Sum_probs=61.4
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecc--eecccCCceEEEecccceecCCCCCCcHHHHHHHHHHH
Q 017953 5 SHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMER 82 (363)
Q Consensus 5 ~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP--~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r 82 (363)
.+++++.|.+.+.+++.+.. .-..|+.++.| ++. ++|.++.. -.+...+.-+.++.+.|++.+
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~---------~~i~gigi~~pG~vd~---~~g~v~~~-~~l~~~~~~~~~l~~~l~~~~-- 107 (310)
T 3htv_A 43 APGLVSGIGEMIDEQLRRFN---------ARCHGLVMGFPALVSK---DKRTIIST-PNLPLTAADLYDLADKLENTL-- 107 (310)
T ss_dssp TTCHHHHHHHHHHHHHHHHT---------EEEEEEEEEESSCBCT---TSSCBCSC-CSSSCCHHHHTTHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHhcC---------CCeeEEEEeccccEeC---CCCEEEeC-CCCCCccccCccHHHHHHHHh--
Confidence 35677888888888776643 11356666665 443 24444321 111111101135666666655
Q ss_pred hCCCceEEEEEeccHHhhhcccc---cCCCceEEEEeeccceeeeEcc
Q 017953 83 IGLDMRVAALVNDTIGTLAGGRY---HNKDAIAAVILGTGTNAAYVER 127 (363)
Q Consensus 83 ~~~~v~v~aivNDTVaTlla~ay---~~~~~~iGlIlGTGtNacy~e~ 127 (363)
++| +.|.||.-+..++... ...+..+.+.+|||.-++.+.+
T Consensus 108 -~~p---v~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGiG~gii~~ 151 (310)
T 3htv_A 108 -NCP---VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMN 151 (310)
T ss_dssp -TSC---EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSEEEEEEET
T ss_pred -CCC---EEEeeHHHHHHHHHHhhcccCCceEEEEEeceeEEEEEEEC
Confidence 554 5678999887653221 2345678899999999999864
No 26
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.08 E-value=0.0026 Score=59.66 Aligned_cols=70 Identities=9% Similarity=-0.005 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCC
Q 017953 262 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSND 341 (363)
Q Consensus 262 ~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~D 341 (363)
.+|..+.+++++.+|.++ .+.... .+-.|.+-|++.+. |.+.+++.+++.. .++...++
T Consensus 210 ~~A~~i~~~~~~~La~~i--~~~~~~---------~p~~vvlgGGv~~~---~~~~l~~~l~~~~-------~~i~~~~~ 268 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN--VLRYNR---------PDLPLHFIGSVAFH---YREVLSSVIKKRG-------LTLGSVLQ 268 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH--TGGGCC---------TTSCEEEESHHHHH---THHHHHHHHHHTT-------CCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHH--hcccCC---------CCceEEEECchHHh---hHHHHHHHHHHcC-------CeecccCc
Confidence 467778899999998888 222210 12246678999865 5566777666542 12344559
Q ss_pred chHHHHHHHHH
Q 017953 342 GSGIGAALLAA 352 (363)
Q Consensus 342 gS~~GAAi~aa 352 (363)
....||+..|.
T Consensus 269 a~~~GA~~la~ 279 (291)
T 1zbs_A 269 SPMEGLIQYHH 279 (291)
T ss_dssp CSHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999998874
No 27
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=96.82 E-value=0.012 Score=54.35 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=68.8
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCCCCCCCccccceeeeecceecccCCceEEEecccceecCCCCCCcHHHHHHHHHHHh
Q 017953 4 SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 83 (363)
Q Consensus 4 ~~~~lFd~iA~~i~~fl~~~~~~~~~~~~~~l~lGftFSFP~~qt~~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~ 83 (363)
+.+++++.+.+.+.+++.+.... ....-+|+...=|++ +|+++ ++-.+. ++-.+.++.+.|++.+
T Consensus 50 ~~~~~~~~i~~~i~~~~~~~~~~-----~~~~~igi~~pG~v~-----~g~v~-~~~~l~-~~w~~~~l~~~l~~~~--- 114 (267)
T 1woq_A 50 TPESVAEAVALVVAELSARPEAP-----AAGSPVGVTFPGIIQ-----HGVVH-SAANVD-KSWLNTDIDALLTARL--- 114 (267)
T ss_dssp CHHHHHHHHHHHHHHHHTSTTCC-----CTTCCEEEEESSCEE-----TTEEC-CCTTSC-GGGTTCBHHHHHHHHH---
T ss_pred CHHHHHHHHHHHHHHHHHhcccc-----CccceEEEEccceEc-----CCEEE-eCCCCC-CCCCCCCHHHHHHHHH---
Confidence 46788999999999987653210 111235665555664 46643 333221 0223578888888766
Q ss_pred CCCceEEEEEeccHHhhhccccc----CCC-ceEEEEeeccceeeeEcc
Q 017953 84 GLDMRVAALVNDTIGTLAGGRYH----NKD-AIAAVILGTGTNAAYVER 127 (363)
Q Consensus 84 ~~~v~v~aivNDTVaTlla~ay~----~~~-~~iGlIlGTGtNacy~e~ 127 (363)
++| +.|.||.-+..++-.+. ..+ ..+.+.+|||.-++.+.+
T Consensus 115 ~~p---V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtGIG~giv~~ 160 (267)
T 1woq_A 115 GRP---VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGIGSAFIFD 160 (267)
T ss_dssp TSC---EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSSEEEEEEET
T ss_pred CCC---EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcceEEEEEEC
Confidence 444 67889999988886542 233 467899999999999864
No 28
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.68 E-value=0.041 Score=53.76 Aligned_cols=75 Identities=17% Similarity=0.099 Sum_probs=54.8
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCc
Q 017953 263 LCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDG 342 (363)
Q Consensus 263 i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~Dg 342 (363)
.|..+.+++++.+|.+|+.++..+..+ +-.|.+.|++.+..+.+.+.+++.+..+. .+.+..++.+
T Consensus 269 ~a~~~l~~~~~~la~~i~~l~~~l~~~--------p~~IvlgGgi~~~~~~l~~~i~~~l~~~~------~~~i~~~~~~ 334 (381)
T 1saz_A 269 WAKRVYRAMAYQIAKWIGKMAAVLKGE--------VDFIVLTGGLAHEKEFLVPWITKRVSFIA------PVLVFPGSNE 334 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC--------CSEEEEEEGGGGCTTTHHHHHHHHHTTTS------CEEEEEBCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCEEEEeCcCccChHHHHHHHHHHHHhhc------CeEEEecCcc
Confidence 456788899999999999999888221 11466789998887778999998887652 4666666654
Q ss_pred ---hHHHHHHHH
Q 017953 343 ---SGIGAALLA 351 (363)
Q Consensus 343 ---S~~GAAi~a 351 (363)
..+|||..+
T Consensus 335 ~~a~~~GAa~l~ 346 (381)
T 1saz_A 335 EKALALSALRVL 346 (381)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 567777654
No 29
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.34 E-value=0.093 Score=49.86 Aligned_cols=211 Identities=15% Similarity=0.156 Sum_probs=117.0
Q ss_pred HHHHHHHHHhCCCceEEEEEeccHHhhhccccc--------------CCCceEEEEeeccceeeeEcccCCCCcccCCCC
Q 017953 74 GELTKAMERIGLDMRVAALVNDTIGTLAGGRYH--------------NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP 139 (363)
Q Consensus 74 ~lL~~al~r~~~~v~v~aivNDTVaTlla~ay~--------------~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~ 139 (363)
+.|++.+ ++| .+.|.||.-+..++-.+. ..+..+.+.+|||.-++.+.+-.
T Consensus 95 ~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGiG~giv~~g~---------- 159 (332)
T 1sz2_A 95 AEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVD---------- 159 (332)
T ss_dssp HHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEEEEEEEEET----------
T ss_pred HHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccceEEEEecCC----------
Confidence 4444433 444 367889999988887653 34667899999999999987521
Q ss_pred CCCceEEEeeccCccCCCCCCcccchhhhc-cCCCCCcceeeeeccccchHHHHHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 017953 140 KSGEMVINMEWGNFRSSHLPLTEYDEALDT-ESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPF 218 (363)
Q Consensus 140 ~~~~miINtEwG~fg~~~l~~T~~D~~~D~-~s~~pg~q~~EkmvsG~YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~ 218 (363)
.+..-.=.|+|... ..|....+..+-. --.+-|.-.+|.++||.-|-...|.... ... ..+ .
T Consensus 160 -~G~~g~agE~GH~~--v~~~~~~~~~l~~~~c~~~g~gclE~~~S~~~l~~~~~~~~~----~~~----~~~------~ 222 (332)
T 1sz2_A 160 -KRWVSLPGEGGHVD--FAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVK----ADN----RLP------E 222 (332)
T ss_dssp -TEEEEEECCGGGSB--CCCCSHHHHHHHHHHHHHSSSCBGGGTSSHHHHHHHHHHHHH----HTT----CCC------C
T ss_pred -CCeeeCCCCccccC--cCCCChHHHHHHHHHHhccCCcchhhhccHHHHHHHHHHHhh----ccC----CCc------c
Confidence 22334555666431 1121211100000 0001234589999999988776654321 100 000 0
Q ss_pred ccCchhhhccccCCCCChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCce
Q 017953 219 ILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQK 298 (363)
Q Consensus 219 ~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~ 298 (363)
..+...+.+...+ +- | ..|..+.+++++.+|.+++.++...+..
T Consensus 223 --------------~~~~~~i~~~a~~--G~------D-----~~A~~~~~~~~~~Lg~~i~~l~~~l~P~--------- 266 (332)
T 1sz2_A 223 --------------NLKPKDITERALA--DS------C-----TDCRRALSLFCVIMGRFGGNLALNLGTF--------- 266 (332)
T ss_dssp --------------CCCHHHHHHHHHH--TC------C-----HHHHHHHHHHHHHHHHHHHHHHHHHTCT---------
T ss_pred --------------CCCHHHHHHHHHc--CC------C-----HHHHHHHHHHHHHHHHHHHHHHHHHCCC---------
Confidence 0111222222211 00 1 3466789999999999999999998752
Q ss_pred EEEEEeceeeccc-HhHH-HHHHHHHHH--HhCC-CCcccEEEEEcCCchHHHHHHHHH
Q 017953 299 SVIALDGGLFEHY-TKFS-ACMQSTVKE--LLGE-EVSETVVIEHSNDGSGIGAALLAA 352 (363)
Q Consensus 299 v~V~vdGS~~~~~-p~f~-~~~~~~l~~--l~~~-~~~~~v~l~~~~DgS~~GAAi~aa 352 (363)
..|-+-|++.... +.|. +.+++.+++ .+.. .....|.+..-+|...+|||..+.
T Consensus 267 ~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~ 325 (332)
T 1sz2_A 267 GGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLR 325 (332)
T ss_dssp TEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHH
T ss_pred eEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHHH
Confidence 1266788888753 3332 234555442 1110 001346666677889999997763
No 30
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=96.22 E-value=0.095 Score=49.39 Aligned_cols=216 Identities=15% Similarity=0.149 Sum_probs=123.5
Q ss_pred ccceeeeecceeccc--CCceEEEecccceecCCCCCCcHHHHHHHHHHHhCCCceEEEEEeccHHhhhcccc----cCC
Q 017953 35 RELGFTFSFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNK 108 (363)
Q Consensus 35 l~lGftFSFP~~qt~--~~~g~Li~wtKgF~~~~v~G~dv~~lL~~al~r~~~~v~v~aivNDTVaTlla~ay----~~~ 108 (363)
.-+|+...=|++... ...|.+.... ..+..+.++.+.|++.+ ++| +.|.||.-+..++-.+ .+.
T Consensus 54 ~gigi~~pG~vd~~~~~~~~G~i~~~~----~~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~ 123 (302)
T 3epq_A 54 QAIGIGSFGPVDNDXTSQTYGTITATP----XAGWRHYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGL 123 (302)
T ss_dssp SEEEEEECSSEECCTTSTTTTEECCCS----STTTBTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTC
T ss_pred eEEEEEeceeeccccccccccEEecCC----CCCccCCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCC
Confidence 445555555676532 1125554332 12345788888888766 554 6788999988877655 345
Q ss_pred CceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCccCCCCCCcccchhhhccCCCC--Ccceeeeecccc
Q 017953 109 DAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNP--GEQIFEKIISGM 186 (363)
Q Consensus 109 ~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~fg~~~l~~T~~D~~~D~~s~~p--g~q~~EkmvsG~ 186 (363)
+..+.+.+|||.-++.+.+ .++-. +.. ..|+|.. +..+-+. +.....- +.-.+|.++||.
T Consensus 124 ~~~~~l~~GtGiG~gii~~----G~l~~-----G~~--agEiGh~-----~v~~~~~--~~~~~~C~~~~gclE~~~S~~ 185 (302)
T 3epq_A 124 DSCLYITIGTGIGAGAIVE----GRLLQ-----GLS--HPEMGHI-----YIRRHPD--DVYQGXCPYHGDCFEGLASGP 185 (302)
T ss_dssp SCEEEEEESSSEEEEEEET----TEECC-----SSS--CCCGGGC-----CCCCCTT--CCCCCSBTTTBSSHHHHHSHH
T ss_pred CcEEEEEECCceEEEEEEC----CEEcc-----cCC--CCccceE-----EEecCCC--CCcCcccCCCCcchhhhCCHH
Confidence 7889999999999999874 12111 111 2355533 1110000 0000000 114788888887
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCccCchhhhccccCCCCChHHHHHHHhhhhCCCCCCHHHHHHHHHHHHH
Q 017953 187 YLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDI 266 (363)
Q Consensus 187 YLGEl~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~vr~i~~~ 266 (363)
.|-+. + +. .. ..+ . . +..
T Consensus 186 al~~~-------~-~~-------~~-----------~~~---~----------------------~-----------~~~ 203 (302)
T 3epq_A 186 AIEAR-------W-GX-------KA-----------ADL---S----------------------D-----------IAQ 203 (302)
T ss_dssp HHHHH-------H-SS-------CG-----------GGG---T----------------------T-----------CHH
T ss_pred HHHHH-------h-hc-------cc-----------ccc---c----------------------c-----------hHH
Confidence 65321 1 00 00 000 0 0 013
Q ss_pred HHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCC-------cccEEEEE-
Q 017953 267 VATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEV-------SETVVIEH- 338 (363)
Q Consensus 267 V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~-------~~~v~l~~- 338 (363)
+.+++++.+|.+|+.++...+.. .|-+.|.+.+. +.|.+.+++.+++.+.... .....++.
T Consensus 204 ~~~~~~~~La~~i~nl~~~ldPe----------~IviGGgi~~~-~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s 272 (302)
T 3epq_A 204 VWELEGYYIAQALAQYILILAPX----------XIILGGGVMQQ-XQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPP 272 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCS----------CEEEESSGGGC-THHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHCch----------hhhcCchhhhh-HHHHHHHHHHHHHHHhhhccCcccccccCceEEEC
Confidence 45678899999999999988642 35567887765 5588888888887653210 01223443
Q ss_pred --cCCchHHHHHHHH
Q 017953 339 --SNDGSGIGAALLA 351 (363)
Q Consensus 339 --~~DgS~~GAAi~a 351 (363)
-+|+..+|||..+
T Consensus 273 ~lg~~a~l~GAa~l~ 287 (302)
T 3epq_A 273 RLGSNAGIIGTLVLA 287 (302)
T ss_dssp TTGGGHHHHHHHHHH
T ss_pred CcCChHHHHHHHHHH
Confidence 4577889998766
No 31
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=95.96 E-value=0.13 Score=48.01 Aligned_cols=65 Identities=18% Similarity=0.124 Sum_probs=44.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecc-cHhHHHHHHHHHHHHhCCCCcccEEEEEcC
Q 017953 262 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEH-YTKFSACMQSTVKELLGEEVSETVVIEHSN 340 (363)
Q Consensus 262 ~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~-~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~ 340 (363)
.+|..+.+++++.++.+++.++.. +. + .|.+-|++... .|.+.+.+++.+ ...+
T Consensus 226 ~~A~~i~~~~~~~L~~~l~~l~~~-~p--------~--~VvlgGgv~~~~~~~l~~~l~~~i--------------~~~~ 280 (305)
T 1zc6_A 226 PEADALLRQAGEDAWAIARALDPQ-DE--------L--PVALCGGLGQALRDWLPPGFRQRL--------------VAPQ 280 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTT-CC--------S--CEEEESHHHHHTGGGSCHHHHHHC--------------CCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CC--------C--eEEEECCchHhHHHHHHHHHHhhc--------------cCCC
Confidence 457788999999999999988753 21 2 36678998763 455666655531 1235
Q ss_pred CchHHHHHHHH
Q 017953 341 DGSGIGAALLA 351 (363)
Q Consensus 341 DgS~~GAAi~a 351 (363)
+...+|||..|
T Consensus 281 ~~~~~GAa~la 291 (305)
T 1zc6_A 281 GDSAQGALLLL 291 (305)
T ss_dssp SCHHHHHHHHT
T ss_pred CCHHHHHHHHH
Confidence 77889998876
No 32
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=93.25 E-value=0.16 Score=47.36 Aligned_cols=68 Identities=6% Similarity=-0.011 Sum_probs=44.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCc
Q 017953 263 LCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDG 342 (363)
Q Consensus 263 i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~Dg 342 (363)
+|..+.+|+++.+|.++ .+... . .+-.|.+-|++.+. |.+.+++.+++ + .+.+...++.
T Consensus 209 ~A~~i~~~~~~~La~~i--~~~~~-~--------~p~~vvlgGGv~~~---l~~~l~~~l~~---~----~~~i~~~~~a 267 (291)
T 1zxo_A 209 AIRQLVMNSFIAFFRRN--VMQYD-Y--------KQYPVHFIGSIAYC---YKEILQDAARQ---T----GIQIGKILQS 267 (291)
T ss_dssp TTTHHHHHHHHHHHTTT--GGGSC-T--------TTSCEEECSHHHHH---THHHHHHHTTT---T----TCCEEEECSC
T ss_pred HHHHHHHHHHHHHHHHH--hcccC-C--------CCceEEEECcHHHH---HHHHHHHHHhc---C----CcEEeecCCC
Confidence 35568888998888888 22211 0 12246678999865 77777776655 2 2345566888
Q ss_pred hHHHHHHHH
Q 017953 343 SGIGAALLA 351 (363)
Q Consensus 343 S~~GAAi~a 351 (363)
..+|||..|
T Consensus 268 ~~~GAa~la 276 (291)
T 1zxo_A 268 PMEGLIQYH 276 (291)
T ss_dssp THHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999998765
No 33
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=75.58 E-value=11 Score=37.77 Aligned_cols=48 Identities=23% Similarity=0.308 Sum_probs=36.8
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.|.+.+.+-+ +++ ..|..-...+++.+|||++|+++.-
T Consensus 405 ~i~v~GGga-ks~~~~Qi~AD----vlg----~pV~~~~~~E~~alGAA~lA~~a~G 452 (526)
T 3ezw_A 405 ALRVDGGAV-ANNFLMQFQSD----ILG----TRVERPEVREVTALGAAYLAGLAVG 452 (526)
T ss_dssp EEEEESGGG-GCHHHHHHHHH----HHT----SEEEEESCCCHHHHHHHHHHHHHTT
T ss_pred EEEEECchh-hCHHHHHHHHH----HHC----CEEEeCCCCchHHHHHHHHHHHHhC
Confidence 466788864 78888777655 343 4687777889999999999998764
No 34
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=73.93 E-value=18 Score=36.18 Aligned_cols=48 Identities=23% Similarity=0.180 Sum_probs=36.9
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.|.+.+.+.+. ++ ..|......+++.+|||++|+++.-
T Consensus 403 ~i~~~GGga-~s~~~~Qi~ADv----~g----~pV~~~~~~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 403 RFFASDGGT-RSRVWMGIMADV----LQ----RPVQLLANPLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp EEEEESGGG-GCHHHHHHHHHH----HT----SCEEEEECCSTHHHHHHHHHHHHTC
T ss_pred EEEEeCCcc-cCHHHHHHHHHH----hC----CeEEecCCCCchHHHHHHHHHHHhC
Confidence 466788865 788888776653 33 4688888889999999999998764
No 35
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=69.90 E-value=13 Score=37.80 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=38.3
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.-++.+.+.+.+-+.+ + ..|......+++.+|||++|+++.-
T Consensus 442 ~i~~~GGga~ks~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 442 ELYACGGLPQKNHLLMQIFADVT----N----REIKVAASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp EEEEESSHHHHCHHHHHHHHHHH----T----SCEEEBCCSSHHHHHHHHHHHHHHC
T ss_pred EEEEEcCchhhCHHHHHHHHHHH----C----CeeEecCCCccHHHHHHHHHHHhcC
Confidence 57789997768888888776644 3 4677666789999999999998764
No 36
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=69.05 E-value=27 Score=32.55 Aligned_cols=80 Identities=10% Similarity=0.026 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCCc
Q 017953 252 TSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVS 331 (363)
Q Consensus 252 ~~~~d~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~ 331 (363)
.+.+| +.+.|+.+|.+|-+.|+.-.. ++.+- + .|.+.|+.+.++|..++.+.+++..+
T Consensus 207 ~~~eD--Iaasl~~sV~~~I~~la~~~a----~~~~i---------~-~Vvf~Gg~l~~n~~l~~~l~~~~~~~------ 264 (287)
T 2ews_A 207 FTPSN--KLAAVIGVVGEVVTTMAITVA----REFKT---------E-NIVYIGSSFHNNALLRKVVEDYTVLR------ 264 (287)
T ss_dssp CCHHH--HHHHHHHHHHHHHHHHHHHHH----HHTTC---------C-EEEEESGGGTTCHHHHHHHHHHHHHT------
T ss_pred CCHHH--HHHHHHHHHHHHHHHHHHHHH----HhCCC---------C-eEEEeCCchhcCHHHHHHHHHHHhhC------
Confidence 44555 456888899888766543221 22221 2 48899998889999999999876543
Q ss_pred ccEEEEEcCCchHHHHHHHHHHhc
Q 017953 332 ETVVIEHSNDGSGIGAALLAASHS 355 (363)
Q Consensus 332 ~~v~l~~~~DgS~~GAAi~aa~~~ 355 (363)
..++...+++--.|| +-||..+
T Consensus 265 -~~~~~~p~~~~~~gA-lGAaL~~ 286 (287)
T 2ews_A 265 -GCKPYYVENGAFSGA-IGALYLE 286 (287)
T ss_dssp -TCEEEECTTGGGHHH-HHHHHTC
T ss_pred -CceEEECCCccHHHH-HHHHHhC
Confidence 244555666655554 6666543
No 37
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=68.21 E-value=21 Score=35.80 Aligned_cols=48 Identities=29% Similarity=0.180 Sum_probs=36.7
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.|.+.+.+.+. ++ ..|......+++.+|||++|+++.-
T Consensus 427 ~i~~~GGga-ks~~~~Qi~ADv----lg----~pV~~~~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 427 RILLIGGGA-KSEAIRTLAPSI----LG----MDVTRPATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp EEEEESGGG-GCHHHHHHHHHH----HT----SCEEEECCCCHHHHHHHHHHHHHHH
T ss_pred EEEEECchh-cCHHHHHHHHHH----hC----CceEecCCcccHHHHHHHHHHHHcC
Confidence 466788865 788888877654 33 4677777889999999999987653
No 38
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=65.64 E-value=25 Score=34.98 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=36.6
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.+.+.+.+.+. ++ ..|......+++.+|||++|+++.-
T Consensus 407 ~i~~~GG~a-ks~~~~Qi~Adv----~g----~pV~~~~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 407 SLRVDGGAV-KNNFIMQFQADI----VN----TSVERPEIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp EEEEESGGG-GCHHHHHHHHHH----HT----SEEEEESCCCHHHHHHHHHHHHHTT
T ss_pred EEEEecchh-cCHHHHHHHHHH----hC----CceEecCCCcchHHHHHHHHHHHhC
Confidence 466788854 888888877654 33 4677777889999999999998754
No 39
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=64.16 E-value=28 Score=34.76 Aligned_cols=48 Identities=23% Similarity=0.285 Sum_probs=36.1
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.+.+.+.+.+. ++ ..|......+++.+|||++|+++.-
T Consensus 404 ~i~~~GGga-~s~~~~Qi~ADv----~g----~pV~~~~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 404 ALRVDGGAV-ANNFLMQFQSDI----LG----TRVERPEVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp EEEEESGGG-GCHHHHHHHHHH----HT----SEEEEESCCCHHHHHHHHHHHHHHT
T ss_pred EEEEeCchh-cCHHHHHHHHHH----hC----CceEecCCCCcHHHHHHHHHHHHhC
Confidence 466788864 888888876653 33 4677777788999999999987654
No 40
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=61.91 E-value=30 Score=34.49 Aligned_cols=48 Identities=19% Similarity=0.220 Sum_probs=35.9
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.+.+.+.+.+.+ + ..|......+++.+|||++|+++.-
T Consensus 406 ~i~~~GGga-~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 406 LLKVDGGAA-KNDLLMQFQADIL----D----IDVQRAANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SEEEECSSSCHHHHHHHHHHHHHTT
T ss_pred EEEEecccc-cCHHHHHHHHHHh----C----CeEEecCCCcchhHHHHHHHHHHhC
Confidence 466788864 7888887776543 3 4676666788999999999998654
No 41
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=61.75 E-value=32 Score=34.24 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=36.2
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.|.+.+.+.+. ++ ..|......+++.+|||++|+++.-
T Consensus 396 ~i~~~GGga-~s~~~~Qi~ADv----~g----~pV~~~~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 396 AINATGGFL-KSDFVRQLCANI----FN----VPIVTMKEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp EEEEESGGG-CSHHHHHHHHHH----HT----SCEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEEeCchh-cCHHHHHHHHHh----hC----CeEEecCCCCchhHHHHHHHHHHcC
Confidence 466788754 788888877654 33 4677776788999999999998653
No 42
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=61.53 E-value=35 Score=33.86 Aligned_cols=48 Identities=21% Similarity=0.293 Sum_probs=36.2
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+.- +.+.+.+.+.+.+ + ..|......+++.+|||++|+++.-
T Consensus 406 ~i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 406 ELRVDGGMV-ANELLMQFQADQL----G----VDVVRPKVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHHT
T ss_pred eEEEeCCcc-cCHHHHHHHHHHh----C----CeEEeCCCCcchHHHHHHHHHhhcC
Confidence 466788765 7888887776543 3 4677777788999999999988753
No 43
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=60.53 E-value=35 Score=34.37 Aligned_cols=48 Identities=13% Similarity=0.246 Sum_probs=36.5
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+. -+.|.+.+.+-+. ++ ..|......+++.+|||++|+++.-
T Consensus 445 ~i~~~GG~-aks~~~~Qi~ADv----~g----~pV~~~~~~e~~alGAA~lA~~a~G 492 (554)
T 3l0q_A 445 TMMASGGG-TKNPIFVQEHANA----TG----CAMLLPEESEAMLLGSAMMGTVAAG 492 (554)
T ss_dssp EEEEESGG-GGCHHHHHHHHHH----HC----CEEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEEeCcc-ccCHHHHHHHHHh----hC----CeEEecCCCcchHHHHHHHHHHHcC
Confidence 46678886 4788888877653 33 4677777889999999999998653
No 44
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=57.41 E-value=1.5 Score=40.62 Aligned_cols=63 Identities=22% Similarity=0.220 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCc-eEEEEEeccHHhhhcccccCCCceEEEEeeccceeeeEcccCCCCcccCCCCCCCceEEEeeccCc
Q 017953 75 ELTKAMERIGLDM-RVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNF 153 (363)
Q Consensus 75 lL~~al~r~~~~v-~v~aivNDTVaTlla~ay~~~~~~iGlIlGTGtNacy~e~~~~i~k~~~~~~~~~~miINtEwG~f 153 (363)
.|++.|+++ ++. ..+.|.||..+..++.. ..+.-+.+|+|||.+++.+.. +++..---|||.+
T Consensus 75 ~l~~~l~~~-~~~~~pv~v~NDa~~aalge~--g~~~~v~v~~GTGi~g~gi~~-------------~G~~~~aGe~Gh~ 138 (291)
T 1zxo_A 75 VLRRAIADS-LPVIGNIKANSDMLAAAHGLC--GQKAGIACILGTGSNSCFYNG-------------KEIVSNISPLGFI 138 (291)
T ss_dssp HHHHHHHHH-SCCCSCCEEECSHHHHHHHTT--TTSCBEEEEESSSEEEEEECS-------------SSEEEECCCCCTT
T ss_pred HHHHHHHHh-cCCCceEEEECcHHHHHHhhc--CCCCcEEEEeCCChheEEECC-------------CCcEEEeCCCccc
Confidence 445555543 222 24678899999988764 445678999999998555531 2344445577755
No 45
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=56.27 E-value=39 Score=33.48 Aligned_cols=47 Identities=19% Similarity=0.265 Sum_probs=35.3
Q ss_pred EEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 301 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 301 V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
|-++|+.- +.+.+.+.+.+.+ + ..|......+++.+|||++|+++.-
T Consensus 397 i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 397 LRVDGGAT-ANDFLMQFQADIL----N----RKVIRPVVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEeCccc-cCHHHHHHHHhhc----C----CeEEEcCCCcchHHHHHHHHHHHhC
Confidence 55678765 7788887776543 3 4677766778999999999998764
No 46
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=54.44 E-value=37 Score=33.59 Aligned_cols=47 Identities=23% Similarity=0.400 Sum_probs=35.5
Q ss_pred EEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 301 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 301 V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
|-++|+.- +.+.+.+.+.+.+ + ..|......+++.+|||++|+++.-
T Consensus 402 i~~~GG~a-~n~~~~q~~Adv~----g----~pV~~~~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 402 LKADGGMA-QNRLFLKIQADLL----G----VPVAVPEVTETTALGAALMAGVGAG 448 (495)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHHT
T ss_pred EEEecccc-cCHHHHHHHHHHh----C----CeeEecCCcccHHHHHHHHHHhhcC
Confidence 66788765 7888887776644 3 4677777778999999999988753
No 47
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=54.42 E-value=21 Score=35.50 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHH-hCCCCcccEEEEEcCCchHHHHHHHHHH
Q 017953 275 SAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKEL-LGEEVSETVVIEHSNDGSGIGAALLAAS 353 (363)
Q Consensus 275 ~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l-~~~~~~~~v~l~~~~DgS~~GAAi~aa~ 353 (363)
+|-.+.-++..+.+. . .|-++|+. -+.|.+.+.+-+ + ++ ..|......+++.+|||+.|++
T Consensus 374 ia~~~r~~l~~~~~~-------~--~i~~~GG~-a~s~~w~Qi~AD----v~~g----~pV~~~~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 374 AALVADTALDLIGST-------G--RILVEGRF-AEADVFVRALAS----LRPD----CAVYTANAHNDVSFGALRLIDP 435 (482)
T ss_dssp HHHHHHHHHHHTTCC-------S--EEEEESGG-GGCHHHHHHHHH----HSTT----SEEEEESSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhcCC-------C--eEEEeCCc-ccCHHHHHHHhh----hcCC----CeEEEcCCCchHHHHHHHHhCc
Confidence 344555556666542 1 46678886 478888887765 3 43 4788888889999999999988
Q ss_pred h
Q 017953 354 H 354 (363)
Q Consensus 354 ~ 354 (363)
+
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 7
No 48
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=53.66 E-value=40 Score=33.18 Aligned_cols=47 Identities=21% Similarity=0.270 Sum_probs=35.1
Q ss_pred EEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCc-hHHHHHHHHHHhcc
Q 017953 301 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDG-SGIGAALLAASHSQ 356 (363)
Q Consensus 301 V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~Dg-S~~GAAi~aa~~~~ 356 (363)
|-++|+.- +.+.+.+.+.+.+ + ..|.....++. +.+|||++|+++.-
T Consensus 390 i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 390 VTLIGGGA-RSEYWRQMLADIS----G----QQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp EEEESGGG-CCHHHHHHHHHHH----C----CCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred EEEEeccc-cCHHHHHHHHHHh----C----CeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 56688775 7788877776643 3 46777777774 89999999988753
No 49
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=52.20 E-value=46 Score=32.04 Aligned_cols=54 Identities=4% Similarity=-0.053 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHH
Q 017953 258 KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKEL 325 (363)
Q Consensus 258 ~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l 325 (363)
.+.+.|..+|.+|-++++.-. | ++.+. . .|-+.|+.+.++|...+.+.+++.-.
T Consensus 280 DIa~gll~sVa~~I~~lA~l~--A--~~~~i--------~--~IvftGgfla~n~~~~~~L~~~l~~w 333 (360)
T 2i7n_A 280 DLARATLVTITNNIGSIARMC--A--LNENI--------D--RVVFVGNFLRINMVSMKLLAYAMDFW 333 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--H--HHHTC--------C--CEEEESGGGCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--H--HHcCC--------C--eEEEeCcccccCHHHHHHHHHHHhhh
Confidence 456788889999877664321 1 12221 1 38889999999999999999988644
No 50
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=52.03 E-value=52 Score=32.56 Aligned_cols=47 Identities=19% Similarity=0.362 Sum_probs=35.7
Q ss_pred EEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 301 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 301 V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
|-++|+.- +.|.+.+.+.+.+ + ..|......+++.+|||++|+++.-
T Consensus 411 i~~~GG~a-~s~~~~Q~~Adv~----g----~pV~~~~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 411 LRCDGGMT-KNKPFMQFNSDII----N----TKIEVSKYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEeCccc-cCHHHHHHHHHHH----C----CeEEecCCCcchHHHHHHHHHHHhC
Confidence 66688765 7888887776644 3 4677777788999999999998763
No 51
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=50.59 E-value=53 Score=32.80 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=35.7
Q ss_pred EEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 301 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 301 V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
|-++|+.- +.|.+.+.+-+. ++ ..|......+++.+|||++|+++.-
T Consensus 429 i~~~GGga-ks~~~~Qi~ADv----lg----~pV~~~~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 429 LRVDGGMV-ASDWTMQRLSDL----LD----APVDRPVILETTALGVAWLAGSRAG 475 (520)
T ss_dssp EEEESGGG-GCHHHHHHHHHH----HT----SCEEEESCCCHHHHHHHHHHHHHHT
T ss_pred EEEeCccc-cCHHHHHHHHHH----hC----CeEEecCCCccHHHHHHHHHHHHcC
Confidence 55678764 788888877654 33 4677777789999999999998753
No 52
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=45.29 E-value=36 Score=34.16 Aligned_cols=47 Identities=17% Similarity=0.240 Sum_probs=34.9
Q ss_pred EEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhcc
Q 017953 301 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 301 V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
|-++|+.- +.|.+.+.+-+. ++ ..|......+++.+|||++|+++.-
T Consensus 438 i~~~GGga-~s~~~~Qi~ADv----~g----~pV~~~~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 438 ILATGGAS-HNREILQVLADV----FD----APVYVIDTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp EEEEEGGG-GCHHHHHHHHHH----HT----SCEEECCCTTHHHHHHHHHHHHHHH
T ss_pred EEEEcchh-cCHHHHHHHHHH----hC----CceEecCCCCchHHHHHHHHHHHhC
Confidence 55677765 788888777654 33 4677766788999999999988753
No 53
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=37.96 E-value=71 Score=31.73 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=35.6
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccE-EEEEcCCchHHHHHHHHHHhcc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETV-VIEHSNDGSGIGAALLAASHSQ 356 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v-~l~~~~DgS~~GAAi~aa~~~~ 356 (363)
.|-++|+. -+.|.+.+.+.+.+ + ..| ......+++.+|||++|+++.-
T Consensus 405 ~i~~~GGg-a~s~~~~Qi~ADv~----g----~pV~~~~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 405 LLKVVGGG-ARSEAWLRMIADNL----N----VSLLVKPDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----T----CEEEECCCGGGHHHHHHHHHHHHHTT
T ss_pred EEEEeCch-hcCHHHHHHHHHHH----C----CeeEEecCCCCchHHHHHHHHHHHhC
Confidence 46678887 48888888776543 3 466 6656788999999999988653
No 54
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=37.74 E-value=1.2e+02 Score=29.63 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=31.5
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEEEEcCCchHHHHHHHHHHhc
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 355 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l~~~~DgS~~GAAi~aa~~~ 355 (363)
.|-++|+.- +.+.+.+.+-+.+ + ..|.... .+++.+|||++|+.+.
T Consensus 396 ~i~~~GGga-ks~~~~Qi~ADvl----g----~pV~~~~-~e~~alGaa~~A~~a~ 441 (489)
T 2uyt_A 396 QLHIVGGGC-QNTLLNQLCADAC----G----IRVIAGP-VEASTLGNIGIQLMTL 441 (489)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SEEEECC-TTHHHHHHHHHHHHHT
T ss_pred EEEEeCChh-hhHHHHHHHHHHH----C----CeeecCC-ccHhHHHHHHHHHHHc
Confidence 466688775 7888887776543 3 3565433 6899999977776653
No 55
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=34.48 E-value=1.1e+02 Score=27.59 Aligned_cols=72 Identities=18% Similarity=0.327 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEE
Q 017953 257 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI 336 (363)
Q Consensus 257 ~~~vr~i~~~V~~RAA~L~aa~iaai~~~~~~~~~~~~~~~~v~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l 336 (363)
..++|.+++.|..+-+ .+++..+. .. .|.+.|++. +.|.+++.+.+.+ + .+|..
T Consensus 185 ~di~~av~e~Va~~i~--------~~~~~~~~-------~~--~i~~~GG~a-~n~~~~~~~~~~l----g----~~v~~ 238 (270)
T 1hux_A 185 IDIIAGIHRSVASRVI--------GLANRVGI-------VK--DVVMTGGVA-QNYGVRGALEEGL----G----VEIKT 238 (270)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC-------CS--SEEEESGGG-GCHHHHHHHHHHH----C----SCEEC
T ss_pred HHHHHHHHHHHHHHHH--------HHHhcCCC-------CC--eEEEeCccc-cCHHHHHHHHHHH----C----CCeEe
Confidence 4567777777777642 22222211 02 366788865 6888888887765 2 23443
Q ss_pred EEcCC-chHHHHHHHHHHh
Q 017953 337 EHSND-GSGIGAALLAASH 354 (363)
Q Consensus 337 ~~~~D-gS~~GAAi~aa~~ 354 (363)
-...+ ...+|||+.|+-.
T Consensus 239 p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 239 SPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp CGGGGGHHHHHHHHHHHHH
T ss_pred CCCcchHhHHHHHHHHHHh
Confidence 32233 5789999988653
No 56
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=31.83 E-value=30 Score=21.96 Aligned_cols=28 Identities=32% Similarity=0.420 Sum_probs=24.1
Q ss_pred CCCCcceeeeeccccchHHHHHHHHHHH
Q 017953 172 LNPGEQIFEKIISGMYLGEIVRRVLCRM 199 (363)
Q Consensus 172 ~~pg~q~~EkmvsG~YLGEl~R~il~~~ 199 (363)
+||.+|+-|-=-...|+|-|+=.++.-+
T Consensus 3 ~Npn~q~VELNRTSLy~GLLlifvlavl 30 (37)
T 3arc_L 3 PNPNRQPVELNRTSLYLGLLLILVLALL 30 (37)
T ss_dssp CCTTCCCBCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcceechhhHHHHHHHHHHHHHH
Confidence 5999999999999999999887776544
No 57
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=25.96 E-value=2.5e+02 Score=29.65 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=30.6
Q ss_pred EEEEeceeecccHhHHHHHHHHHHHHhCCCCcccEEE---EEcCCc-hHHHHHHHHHHh
Q 017953 300 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI---EHSNDG-SGIGAALLAASH 354 (363)
Q Consensus 300 ~V~vdGS~~~~~p~f~~~~~~~l~~l~~~~~~~~v~l---~~~~Dg-S~~GAAi~aa~~ 354 (363)
+|++.|+|+ .+...++.+.+.+.+. +.++.+ .+..|| -.+|+|++|+..
T Consensus 696 ~VvLsGGVa-~N~~Lr~~L~~~l~~~-----g~~v~~p~~~p~~DgGialGQA~~a~~~ 748 (761)
T 3vth_A 696 KVVLSGGSF-QNRYLLRRLIEKLSLS-----GFEVYSNSKVPCNDGGISLGQAVIANKI 748 (761)
T ss_dssp EEEEESGGG-GSHHHHHHHHHHHHHT-----TCEEEECSSSCSSGGGHHHHHHHHHHHH
T ss_pred EEEEECcHH-HHHHHHHHHHHHHHhC-----CCEEEecCCCCCCchHHHHHHHHHHHHH
Confidence 689999998 5566677776655432 123333 233444 559999988643
Done!