Query 017954
Match_columns 363
No_of_seqs 373 out of 1714
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 07:35:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017954.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017954hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3htm_A Speckle-type POZ protei 100.0 4.3E-30 1.5E-34 224.0 15.8 160 12-175 10-172 (172)
2 3hqi_A Speckle-type POZ protei 100.0 1.9E-28 6.4E-33 233.8 17.4 160 12-175 150-312 (312)
3 3hve_A Gigaxonin; ubiquitin, c 100.0 2.6E-28 8.8E-33 226.6 17.4 167 20-192 15-185 (256)
4 3t92_A Histone acetyltransfera 100.0 5.6E-29 1.9E-33 203.6 9.0 104 214-333 10-121 (121)
5 3i3n_A Kelch-like protein 11; 100.0 2.9E-28 1E-32 229.1 13.4 160 20-182 16-186 (279)
6 4eoz_A Speckle-type POZ protei 99.9 9E-28 3.1E-32 203.5 7.3 141 13-157 2-145 (145)
7 3p57_P Histone acetyltransfera 99.9 4.4E-27 1.5E-31 189.1 9.4 103 215-333 10-112 (112)
8 2if5_A Zinc finger and BTB dom 99.9 3E-22 1E-26 164.4 11.3 108 20-131 9-119 (120)
9 2z8h_A Transcription regulator 99.9 2.8E-22 9.6E-27 168.9 9.8 118 17-140 17-138 (138)
10 1r29_A B-cell lymphoma 6 prote 99.9 7.5E-22 2.6E-26 163.7 11.9 111 19-134 12-126 (127)
11 2vkp_A BTB/POZ domain-containi 99.9 1E-21 3.5E-26 158.3 12.0 98 34-135 9-109 (109)
12 2ppi_A Gigaxonin; BTB domain, 99.9 1.3E-21 4.6E-26 166.1 10.1 109 20-131 31-143 (144)
13 3b84_A Zinc finger and BTB dom 99.8 1.2E-21 3.9E-26 161.0 8.2 106 21-134 9-117 (119)
14 1buo_A POZ domain, protein (pr 99.8 3.8E-21 1.3E-25 158.3 10.8 106 20-134 12-120 (121)
15 2vpk_A Myoneurin; transcriptio 99.8 3.4E-21 1.1E-25 157.3 10.3 104 21-132 7-115 (116)
16 2yy9_A Zinc finger and BTB dom 99.8 1.7E-21 5.7E-26 163.7 8.0 112 20-139 9-123 (135)
17 2ihc_A Transcription regulator 99.8 1.6E-21 5.6E-26 161.2 3.1 109 18-132 11-123 (124)
18 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.3E-20 4.4E-25 154.7 7.5 103 21-132 12-117 (119)
19 3ohu_A Transcription regulator 99.8 4E-21 1.4E-25 158.9 3.4 105 21-131 17-125 (125)
20 3ga1_A Nucleus accumbens-assoc 99.8 1.1E-20 3.8E-25 157.3 5.5 106 21-134 18-127 (129)
21 3m5b_A Zinc finger and BTB dom 99.8 1.5E-19 5.2E-24 148.5 5.9 87 34-133 31-117 (119)
22 3fkc_A Transcriptional regulat 99.8 3.3E-18 1.1E-22 139.7 11.4 97 20-125 15-115 (116)
23 2ast_A S-phase kinase-associat 99.5 2.6E-13 9E-18 116.8 11.7 109 36-147 3-141 (159)
24 4ajy_C Transcription elongatio 99.3 1.8E-11 6E-16 96.5 9.5 80 36-119 4-96 (97)
25 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 1.4E-10 4.7E-15 97.7 9.2 100 36-143 4-129 (141)
26 2p1m_A SKP1-like protein 1A; F 99.0 1E-10 3.5E-15 100.6 3.7 108 35-147 5-140 (160)
27 1hv2_A Elongin C, ELC1; protei 98.7 9.2E-08 3.2E-12 75.4 8.8 81 35-120 5-99 (99)
28 3v7d_A Suppressor of kinetocho 98.6 2.8E-07 9.5E-12 79.7 11.6 102 34-136 7-134 (169)
29 2fnj_C Transcription elongatio 98.6 1.3E-07 4.6E-12 74.0 7.3 81 36-120 3-96 (96)
30 2eqx_A Kelch repeat and BTB do 98.5 1.8E-07 6.3E-12 74.4 5.6 59 132-193 5-63 (105)
31 1vcb_B Protein (elongin C); tu 98.3 2.6E-06 9E-11 68.5 7.9 82 35-120 18-112 (112)
32 3drz_A BTB/POZ domain-containi 98.2 7.8E-06 2.7E-10 65.1 9.3 96 35-133 7-106 (107)
33 1l3e_B P300 protein; protein-p 98.1 4.8E-06 1.6E-10 65.2 5.6 84 217-311 16-99 (101)
34 3drx_A BTB/POZ domain-containi 97.0 0.00098 3.3E-08 58.7 6.0 95 36-133 14-112 (202)
35 3kvt_A Potassium channel prote 95.8 0.0029 1E-07 50.7 1.6 87 35-124 6-93 (115)
36 1s1g_A Potassium voltage-gated 95.0 0.035 1.2E-06 45.0 5.5 85 34-124 13-100 (124)
37 2nz0_B Potassium voltage-gated 94.6 0.033 1.1E-06 46.1 4.4 85 33-123 34-121 (140)
38 1t1d_A Protein (potassium chan 94.4 0.023 8E-07 44.2 2.9 86 36-124 3-90 (100)
39 1nn7_A Potassium channel KV4.2 93.1 0.023 7.8E-07 44.7 0.8 82 36-123 2-86 (105)
40 1l3e_B P300 protein; protein-p 91.7 0.19 6.6E-06 39.0 4.4 50 218-284 48-97 (101)
41 2vkp_A BTB/POZ domain-containi 85.9 1.8 6E-05 33.0 6.3 32 135-166 77-108 (109)
42 3t92_A Histone acetyltransfera 84.6 0.85 2.9E-05 36.6 3.9 50 259-312 17-68 (121)
43 2yy9_A Zinc finger and BTB dom 74.9 3 0.0001 33.4 4.3 35 135-169 87-121 (135)
44 1r29_A B-cell lymphoma 6 prote 74.2 5.4 0.00019 31.2 5.6 31 135-165 95-125 (127)
45 2q81_A MIZ-1 protein; BTB/POZ 71.7 9.3 0.00032 29.5 6.4 30 135-164 88-117 (119)
46 3p57_P Histone acetyltransfera 71.6 3.5 0.00012 32.4 3.7 30 285-315 17-46 (112)
47 3b84_A Zinc finger and BTB dom 71.6 5.2 0.00018 31.1 4.8 32 135-166 86-117 (119)
48 2vpk_A Myoneurin; transcriptio 71.3 9.8 0.00033 29.1 6.4 30 135-164 86-115 (116)
49 1buo_A POZ domain, protein (pr 70.9 11 0.00039 29.1 6.7 32 135-166 89-120 (121)
50 2if5_A Zinc finger and BTB dom 68.6 13 0.00045 28.5 6.7 29 135-163 91-119 (120)
51 2eqx_A Kelch repeat and BTB do 65.2 6.3 0.00021 30.1 4.0 30 106-135 11-40 (105)
52 2z8h_A Transcription regulator 60.1 2.1 7.2E-05 34.4 0.3 33 135-167 101-133 (138)
53 2r9r_B Paddle chimera voltage 59.8 4.4 0.00015 40.4 2.7 84 35-124 53-141 (514)
54 2ppi_A Gigaxonin; BTB domain, 56.9 11 0.00039 30.3 4.4 29 135-163 115-143 (144)
55 3htm_A Speckle-type POZ protei 55.2 24 0.00082 28.7 6.2 32 135-166 100-131 (172)
56 4eoz_A Speckle-type POZ protei 55.0 14 0.00046 29.3 4.5 33 135-167 91-123 (145)
57 3m5b_A Zinc finger and BTB dom 50.3 24 0.00083 27.3 5.2 31 135-165 87-117 (119)
58 3ga1_A Nucleus accumbens-assoc 46.0 7.8 0.00027 30.4 1.6 32 135-166 96-127 (129)
59 3hve_A Gigaxonin; ubiquitin, c 41.3 39 0.0013 29.6 5.7 32 135-166 99-130 (256)
60 3i3n_A Kelch-like protein 11; 40.0 44 0.0015 29.7 5.9 33 135-167 107-139 (279)
61 3hqi_A Speckle-type POZ protei 33.6 30 0.001 31.4 3.7 30 106-135 275-304 (312)
62 4g9q_A 4-carboxymuconolactone 33.4 2.1E+02 0.0072 25.7 9.2 110 59-169 19-139 (269)
63 2plx_B Peptide inhibitor; heli 27.9 54 0.0018 17.9 2.5 21 142-162 3-23 (26)
64 2ast_A S-phase kinase-associat 26.7 72 0.0025 26.0 4.6 34 134-167 93-126 (159)
65 1oeg_A Apolipoprotein E; siali 24.4 46 0.0016 18.9 1.9 16 320-335 8-23 (26)
66 2ihc_A Transcription regulator 22.8 4.9 0.00017 31.5 -3.4 30 135-164 94-123 (124)
No 1
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=224.00 Aligned_cols=160 Identities=24% Similarity=0.362 Sum_probs=142.8
Q ss_pred CCCCCCCCcchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHH
Q 017954 12 GHPDVHSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVS 88 (363)
Q Consensus 12 ~~~~i~~p~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~ 88 (363)
..+.+.+|++++..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.+++.| +....|.++++++++|+
T Consensus 10 ~~~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~f~ 87 (172)
T 3htm_A 10 TMNMVKVPECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVEPEVFK 87 (172)
T ss_dssp --CCSCCCCCCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCCCG-GGTTEEEECSSCHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHhCCCCcceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCccc-cCCCeEEecCCCHHHHH
Confidence 4467888999999999999884 7999999 89999999999999999999999999887 56778999999999999
Q ss_pred HHHHhhhCCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 017954 89 SFVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFK 168 (363)
Q Consensus 89 ~~L~flYt~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf~ 168 (363)
.+|+|+|||.++.+. +++.+++.+|++|+++.|+..|+++|.+.++++|++.++.+|..|+++.|.+.|.+||.+||.
T Consensus 88 ~~l~~~Yt~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 88 EMMCFIYTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp HHHHHHHHSCCTTGG--GTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHhCCCCCCcH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 999999999998775 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchh
Q 017954 169 AVEKTEG 175 (363)
Q Consensus 169 ~v~~~e~ 175 (363)
++.++++
T Consensus 166 ~v~~s~~ 172 (172)
T 3htm_A 166 DVLETSG 172 (172)
T ss_dssp -------
T ss_pred HHHcCCC
Confidence 9987764
No 2
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.96 E-value=1.9e-28 Score=233.78 Aligned_cols=160 Identities=24% Similarity=0.362 Sum_probs=139.8
Q ss_pred CCCCCCCCcchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHH
Q 017954 12 GHPDVHSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVS 88 (363)
Q Consensus 12 ~~~~i~~p~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~ 88 (363)
..+.+.+|++++..++..++++ +||+|.+ +|++|+|||.|||++||||++||.+++.| +....|.|+++++++|+
T Consensus 150 ~~~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~f~ 227 (312)
T 3hqi_A 150 TMNMVKVPECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVEPEVFK 227 (312)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEECSSCHHHHH
T ss_pred cccccCCCCchHHHHHHHHHhCCCCCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccCccc-cCCceEEecCCCHHHHH
Confidence 4567889999999999998874 7999999 89999999999999999999999999888 56789999999999999
Q ss_pred HHHHhhhCCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 017954 89 SFVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFK 168 (363)
Q Consensus 89 ~~L~flYt~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf~ 168 (363)
.+|+|+||+.++... +++.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..|.+.|++||..||.
T Consensus 228 ~~L~~iYt~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 228 EMMCFIYTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp HHHHHHHHSCCTTHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHhhcCCCCCChH--HHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 999999999998774 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchh
Q 017954 169 AVEKTEG 175 (363)
Q Consensus 169 ~v~~~e~ 175 (363)
++.++++
T Consensus 306 ~v~~s~g 312 (312)
T 3hqi_A 306 DVLETSG 312 (312)
T ss_dssp -------
T ss_pred HHhhCCC
Confidence 9988764
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=2.6e-28 Score=226.58 Aligned_cols=167 Identities=16% Similarity=0.243 Sum_probs=145.5
Q ss_pred cchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCC-CCCCCeEEeCCCCHHHHHHHHHhhh
Q 017954 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKH-RSSEKVIPILGVPCGAVSSFVGFLY 95 (363)
Q Consensus 20 ~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e-~s~~~~I~l~~v~~~~f~~~L~flY 95 (363)
++.+..++..++++ +||+|.+ +|+.|+|||.||+++|+||++||.+++.+ .+....|.++++++++|+.+|+|+|
T Consensus 15 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Y 93 (256)
T 3hve_A 15 AARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIF 93 (256)
T ss_dssp HHHHHHHHHTCCC--CCCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhcc
Confidence 45788888888885 6999999 89999999999999999999999998762 2466789999999999999999999
Q ss_pred CCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhcchh
Q 017954 96 TSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEG 175 (363)
Q Consensus 96 t~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf~~v~~~e~ 175 (363)
||.+.++. +++.+++.+|++|+++.|+..|+++|...++++||+.++.+|..|+++.|.+.|.+||..||.++..+++
T Consensus 94 t~~~~i~~--~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~ 171 (256)
T 3hve_A 94 SGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEE 171 (256)
T ss_dssp HSCCCCC---CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCCCcccH--hHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99998875 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccChHHHHHHHH
Q 017954 176 WKFLQDHDPWLELQILQ 192 (363)
Q Consensus 176 f~~L~~~~p~l~~ell~ 192 (363)
|..|+.+ .+.+++.
T Consensus 172 f~~L~~~---~l~~lL~ 185 (256)
T 3hve_A 172 FLELSPQ---KLKEVIS 185 (256)
T ss_dssp HHSSCHH---HHHHHHH
T ss_pred hhcCCHH---HHHHHHc
Confidence 9999865 5555554
No 4
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=99.95 E-value=5.6e-29 Score=203.62 Aligned_cols=104 Identities=28% Similarity=0.643 Sum_probs=94.0
Q ss_pred HHhhhhhHHHHHHHhhhcCCCCCCCcCCCCCCCCCCCCCcchhhhhHhhhhhcccccccCCCChhhHHHHHHHHHHHhhc
Q 017954 214 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMC 293 (363)
Q Consensus 214 y~~l~~~~~~l~h~~~~~~~~~~p~~~~~~~~~~~c~~~~~c~~l~~l~~H~~~c~~r~~~gc~~c~r~~~l~~~h~~~c 293 (363)
+.+|++++++|+|++. |+ .+.|. ++.|.+||.|++|+.+|+.+..|||++|++||+||.+|+++|
T Consensus 10 ~~~iq~~l~~L~HA~~--C~------------~~~C~-~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C 74 (121)
T 3t92_A 10 RLSIQRAIQSLVHAAQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHC 74 (121)
T ss_dssp HHHHHHHHHHHHHHHH--CC------------CTTCC-CHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcc--Cc------------CCCCC-CchhHHHHHHHHHHHHccCCCCCCCCchHHHHHHHHHHHHhC
Confidence 4688999999999998 86 46798 999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCcchHhHHHHhhhh--------cCchhHHHHHHHHHHhhh
Q 017954 294 EQSDSCRVPLCRQFKLKAQLEK--------KGDDGRWRLLVKKVVSAK 333 (363)
Q Consensus 294 ~~~~~c~vp~c~~~k~~~~~~~--------~~~~~~~~~l~~~~~~~~ 333 (363)
.+++ |+||+|++||++|++++ .++|++|+|||+||++||
T Consensus 75 ~~~~-C~VP~C~~iK~~~~~qq~q~~~~~~~~~~~~~~~l~~~~~~~~ 121 (121)
T 3t92_A 75 QENK-CPVPFCLNIKQKLRQQQLEASIDLSAYIESGEEQLLSDLFAVK 121 (121)
T ss_dssp CCTT-CCSTTHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTC--
T ss_pred CCCC-CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9976 99999999999999873 458999999999999886
No 5
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.95 E-value=2.9e-28 Score=229.06 Aligned_cols=160 Identities=20% Similarity=0.302 Sum_probs=140.0
Q ss_pred cchhHHhHhhccCC---CCEEEEec--CCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeC------CCCHHHHH
Q 017954 20 VTTLTKENAPAFYE---PDVQILTS--GGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL------GVPCGAVS 88 (363)
Q Consensus 20 ~s~l~~dl~~L~~~---~DV~~~v~--~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~------~v~~~~f~ 88 (363)
++.+...+..++.+ +||+|.++ +|+.|+|||.||+++|+||++||.+++.| +....|.++ ++++++|.
T Consensus 16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e-~~~~~i~l~~~~~~~~v~~~~f~ 94 (279)
T 3i3n_A 16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSE-SRSGRVEMRKWSSEPGPEPDTVE 94 (279)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCcc-ccCCeEEeccccccCCCCHHHHH
Confidence 34566677777663 79999994 38999999999999999999999999888 567789998 89999999
Q ss_pred HHHHhhhCCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 017954 89 SFVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFK 168 (363)
Q Consensus 89 ~~L~flYt~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf~ 168 (363)
.+|+|+|||.+.++. +++.+++.+|++|+++.|+..|+++|.+.++++||+.++.+|..|+++.|.+.|.+||..||.
T Consensus 95 ~ll~~~Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~ 172 (279)
T 3i3n_A 95 AVIEYMYTGRIRVST--GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFH 172 (279)
T ss_dssp HHHHHHHHSEEEEET--TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHH
T ss_pred HHHHhhCcCCcccCH--HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 999999999998875 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchhhhhcccc
Q 017954 169 AVEKTEGWKFLQDH 182 (363)
Q Consensus 169 ~v~~~e~f~~L~~~ 182 (363)
++..+++|..|+.+
T Consensus 173 ~v~~~~~f~~L~~~ 186 (279)
T 3i3n_A 173 KVIQDEEFYTLPFH 186 (279)
T ss_dssp HHTTSSGGGGSCHH
T ss_pred HHhcCcChhcCCHH
Confidence 99999999999855
No 6
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.94 E-value=9e-28 Score=203.49 Aligned_cols=141 Identities=25% Similarity=0.386 Sum_probs=104.1
Q ss_pred CCCCCCCcchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHH
Q 017954 13 HPDVHSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSS 89 (363)
Q Consensus 13 ~~~i~~p~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~ 89 (363)
.+.+.+|++++..++..++++ +||+|.+ +|+.|+|||.||+++|+||++||.+++.+ +....|.++++++++|+.
T Consensus 2 s~~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~~~~ 79 (145)
T 4eoz_A 2 SNMVKVPECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVEPEVFKE 79 (145)
T ss_dssp ---CCCCCCCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSSHH-HHHTEEEECSSCHHHHHH
T ss_pred CCcccCChHHHHHHHHHHHhCCCCcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCCcC-CCCceEEecCCCHHHHHH
Confidence 467889999999999999884 6999999 89999999999999999999999998776 456789999999999999
Q ss_pred HHHhhhCCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhhHHHHHHHHHHCCCHHHHH
Q 017954 90 FVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYL 157 (363)
Q Consensus 90 ~L~flYt~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n~~~il~lA~~~~~~~L~~ 157 (363)
+|+|+|||.++.+. +++.+++.+|++|+++.|+..|+++|.+.++++|++.++.+|..|+++.|++
T Consensus 80 ~l~~~Y~~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 80 MMCFIYTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHHHHSCCTTGG--GTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHhhccCccCCcH--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 99999999998775 8899999999999999999999999999999999999999999999998863
No 7
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=99.94 E-value=4.4e-27 Score=189.07 Aligned_cols=103 Identities=26% Similarity=0.672 Sum_probs=86.6
Q ss_pred HhhhhhHHHHHHHhhhcCCCCCCCcCCCCCCCCCCCCCcchhhhhHhhhhhcccccccCCCChhhHHHHHHHHHHHhhcC
Q 017954 215 LQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCE 294 (363)
Q Consensus 215 ~~l~~~~~~l~h~~~~~~~~~~p~~~~~~~~~~~c~~~~~c~~l~~l~~H~~~c~~r~~~gc~~c~r~~~l~~~h~~~c~ 294 (363)
..|+..+++|+|++. |. +++|. +++|.+||.|++|+++|+.|++|||++|++||+|+++||++|+
T Consensus 10 ~~iq~~l~~L~HA~~--C~------------~~~C~-~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~ 74 (112)
T 3p57_P 10 LSIQRCIQSLVHACQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQ 74 (112)
T ss_dssp HHHHHHHHHHHHHHH--CC------------CTTCC-CTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcc--CC------------CCCCC-ChhhHHHHHHHHHHHHccCCCCCCCcccHHHHHHHHHHHHHcC
Confidence 567888999999998 87 67999 9999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCcchHhHHHHhhhhcCchhHHHHHHHHHHhhh
Q 017954 295 QSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSAK 333 (363)
Q Consensus 295 ~~~~c~vp~c~~~k~~~~~~~~~~~~~~~~l~~~~~~~~ 333 (363)
++ .|+||+|++||++|++++.+.......+.++.+++|
T Consensus 75 ~~-~C~VP~C~~iK~~~~q~q~q~r~~~~~~~rrr~a~~ 112 (112)
T 3p57_P 75 EN-KCPVPFCLNIKQKLRQQQLQHRLQQAQMLRRRMASM 112 (112)
T ss_dssp ST-TCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CC-CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 95 599999999999999998876666777888877654
No 8
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.87 E-value=3e-22 Score=164.41 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=95.1
Q ss_pred cchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhC
Q 017954 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT 96 (363)
Q Consensus 20 ~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt 96 (363)
++++..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.| +....|.++++++++|+.+|+|+||
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~f~~ll~~~Yt 86 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVV-DQQNVYEIDFVSAEALTALMDFAYT 86 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCCccc-cCCceEEeCCCCHHHHHHHHHHHcC
Confidence 45677778877774 7999999 89999999999999999999999999887 5677899999999999999999999
Q ss_pred CCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 017954 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGL 131 (363)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L 131 (363)
|.+.++. +++.+++.+|++|+++.|+..|+++|
T Consensus 87 ~~~~~~~--~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 87 ATLTVST--ANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp SCCCCCG--GGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9998875 89999999999999999999999987
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.87 E-value=2.8e-22 Score=168.93 Aligned_cols=118 Identities=17% Similarity=0.180 Sum_probs=106.0
Q ss_pred CCCcchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeC-CCCHHHHHHHHH
Q 017954 17 HSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL-GVPCGAVSSFVG 92 (363)
Q Consensus 17 ~~p~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~-~v~~~~f~~~L~ 92 (363)
..+++.+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.+++.+ ...|.++ ++++++|+.+|+
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~v~~~~~~~lL~ 92 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDA---ELTVTLPEEVTVKGFEPLIQ 92 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCCT---TEEEECCTTSCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCCC---CceEEeCCCCCHHHHHHHHH
Confidence 45566888888888874 7999999 89999999999999999999999998765 3468895 899999999999
Q ss_pred hhhCCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhhH
Q 017954 93 FLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNV 140 (363)
Q Consensus 93 flYt~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n~ 140 (363)
|+|||.+.++. +++.+|+.+|++|+++.|+..|+++|...++.+|+
T Consensus 93 ~~Ytg~~~i~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sna 138 (138)
T 2z8h_A 93 FAYTAKLILSK--DNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDSTS 138 (138)
T ss_dssp HHHHSCCCCCT--TTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCCC
T ss_pred HhcCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccccC
Confidence 99999998885 88999999999999999999999999999988773
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.87 E-value=7.5e-22 Score=163.74 Aligned_cols=111 Identities=17% Similarity=0.222 Sum_probs=101.1
Q ss_pred CcchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEe-CCCCHHHHHHHHHhh
Q 017954 19 PVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPI-LGVPCGAVSSFVGFL 94 (363)
Q Consensus 19 p~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l-~~v~~~~f~~~L~fl 94 (363)
.++.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.| ....|.| +++++++|+.+|+|+
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~e--~~~~i~l~~~~~~~~f~~ll~~~ 88 (127)
T 1r29_A 12 HASDVLLNLNRLRSRDILTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKR--NLSVINLDPEINPEGFNILLDFM 88 (127)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTT--TCSEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCccC--CCCEEEeCCCCCHHHHHHHHHHH
Confidence 356788888888875 6999999 89999999999999999999999999877 5678999 999999999999999
Q ss_pred hCCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhc
Q 017954 95 YTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (363)
Q Consensus 95 Yt~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~ 134 (363)
|||.+.++. +++.+++.+|++|+++.|+..|+++|.+.
T Consensus 89 Ytg~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 89 YTSRLNLRE--GNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCCCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999875 89999999999999999999999998753
No 11
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.87 E-value=1e-21 Score=158.34 Aligned_cols=98 Identities=21% Similarity=0.282 Sum_probs=85.8
Q ss_pred CCEEEEecCC---eEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHHH
Q 017954 34 PDVQILTSGG---LRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIH 110 (363)
Q Consensus 34 ~DV~~~v~~g---~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~~ 110 (363)
+||+|.+++| +.|+|||.||+++|+||++||.+++.|. . ..|.++++++++|+.+|+|+|||.++++. +++.+
T Consensus 9 ~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~-~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~--~~~~~ 84 (109)
T 2vkp_A 9 ADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV-K-SEIHIPDVEPAAFLILLKYMYSDEIDLEA--DTVLA 84 (109)
T ss_dssp CCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT--TTHHH
T ss_pred ccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC-C-CeEEeCCCCHHHHHHHHHHHcCCCccCCH--HHHHH
Confidence 7999999543 8999999999999999999999998884 4 88999999999999999999999998886 89999
Q ss_pred HHHHHhhcCchhHHHHHHHHHHhcC
Q 017954 111 LLALSHVYSVPQLKQRCTKGLGERL 135 (363)
Q Consensus 111 Ll~lAd~y~v~~Lk~~ce~~L~~~l 135 (363)
++.+|++|+++.|+..|+++|.+.+
T Consensus 85 ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 85 TLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 9999999999999999999998753
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=166.14 Aligned_cols=109 Identities=18% Similarity=0.292 Sum_probs=96.1
Q ss_pred cchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCC-CCCCCeEEeCCCCHHHHHHHHHhhh
Q 017954 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKH-RSSEKVIPILGVPCGAVSSFVGFLY 95 (363)
Q Consensus 20 ~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e-~s~~~~I~l~~v~~~~f~~~L~flY 95 (363)
++.+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.+++.+ .+....|.++++++++|+.+|+|+|
T Consensus 31 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiY 109 (144)
T 2ppi_A 31 AARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIF 109 (144)
T ss_dssp HHHHHHHHHHTTC--CCCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHh
Confidence 34778888888885 6999999 89999999999999999999999988764 2356789999999999999999999
Q ss_pred CCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 017954 96 TSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGL 131 (363)
Q Consensus 96 t~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L 131 (363)
||.+.++. +++.+|+.+|++|+++.|+..|+++|
T Consensus 110 tg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 110 SGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp TSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 99998875 89999999999999999999999876
No 13
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=160.99 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=93.0
Q ss_pred chhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCC
Q 017954 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTS 97 (363)
Q Consensus 21 s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~ 97 (363)
+.+..++.+++++ +||+|.+ +|++|+|||.||+++||||++||.+++ ...|.++++++++|+.+|+|+|||
T Consensus 9 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~~~f~~ll~~iYtg 82 (119)
T 3b84_A 9 VRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLPAGFAEIFGLLLDFFYTG 82 (119)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEECGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeCCCCHHHHHHHHHHHcCC
Confidence 4566677777663 7999999 899999999999999999999999875 346999999999999999999999
Q ss_pred CcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhc
Q 017954 98 RCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (363)
Q Consensus 98 ~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~ 134 (363)
.++++. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 83 ~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 83 HLALTS--GNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred CCccCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 999875 88999999999999999999999988653
No 14
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.85 E-value=3.8e-21 Score=158.26 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=95.3
Q ss_pred cchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhC
Q 017954 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT 96 (363)
Q Consensus 20 ~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt 96 (363)
++.+..++.+++++ +||+|.+ +|+.|+|||.||+++||||++||.++ ...|.++++++++|+.+|+|+||
T Consensus 12 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~~~~f~~ll~~~Yt 84 (121)
T 1buo_A 12 PTGLLCKANQMRLAGTLCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN------SQHYTLDFLSPKTFQQILEYAYT 84 (121)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC------CcEEEeCCCCHHHHHHHHHhhcC
Confidence 45677778777763 7999999 89999999999999999999999864 34699999999999999999999
Q ss_pred CCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhc
Q 017954 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (363)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~ 134 (363)
|.++++. +++.+++.+|++|+++.|+..|+++|.+.
T Consensus 85 g~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 85 ATLQAKA--EDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp SCCCCCG--GGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcCCCH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9999875 89999999999999999999999999764
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.85 E-value=3.4e-21 Score=157.28 Aligned_cols=104 Identities=16% Similarity=0.208 Sum_probs=93.1
Q ss_pred chhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeC--CCCHHHHHHHHHhhh
Q 017954 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL--GVPCGAVSSFVGFLY 95 (363)
Q Consensus 21 s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~--~v~~~~f~~~L~flY 95 (363)
+.+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|
T Consensus 7 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~~i~l~~~~~~~~~f~~ll~~~Y 80 (116)
T 2vpk_A 7 EHLLERLNKQREAGFLCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRST-----SENNVFLDQSQVKADGFQKLLEFIY 80 (116)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC-----CCSCEECCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCC-----CCCeEEeecCCCCHHHHHHHHHHHc
Confidence 4667777777763 7999999 89999999999999999999999886 24457787 999999999999999
Q ss_pred CCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 017954 96 TSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLG 132 (363)
Q Consensus 96 t~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~ 132 (363)
||.++++. +++.+++.+|++|+++.|+..|+++|.
T Consensus 81 t~~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 81 TGTLNLDS--WNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999875 899999999999999999999999985
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.84 E-value=1.7e-21 Score=163.67 Aligned_cols=112 Identities=15% Similarity=0.138 Sum_probs=93.0
Q ss_pred cchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhC
Q 017954 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT 96 (363)
Q Consensus 20 ~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt 96 (363)
...+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+||
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~~~~~~~f~~lL~fiYt 82 (135)
T 2yy9_A 9 SVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLPAGFAEIFGLLLDFFYT 82 (135)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeCCCCHHHHHHHHHHHhC
Confidence 34667778877775 6999999 899999999999999999999999875 34699999999999999999999
Q ss_pred CCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhh
Q 017954 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDN 139 (363)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n 139 (363)
|.+.++. +++.+|+.+|++|+++.|++.|+++|.+.+...+
T Consensus 83 g~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 83 GHLALTS--GNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp SCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred CCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 9998875 8899999999999999999999999988765433
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=1.6e-21 Score=161.24 Aligned_cols=109 Identities=19% Similarity=0.199 Sum_probs=95.1
Q ss_pred CCcchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEe-CCCCHHHHHHHHHh
Q 017954 18 SPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPI-LGVPCGAVSSFVGF 93 (363)
Q Consensus 18 ~p~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l-~~v~~~~f~~~L~f 93 (363)
.+++.+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.+++.+ ...|.+ .++++++|+.+|+|
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~i~l~~~v~~~~f~~lL~~ 86 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDVLCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQADG---ELNITLPEEVTVKGFEPLIQF 86 (124)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCCC---CceEeecCCcCHHHHHHHHHH
Confidence 4566788888888874 7999999 89999999999999999999999998765 246888 48999999999999
Q ss_pred hhCCCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 017954 94 LYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLG 132 (363)
Q Consensus 94 lYt~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~ 132 (363)
+|||.+.++. +++.+++.+|++|+++.|+..|+++|.
T Consensus 87 iYtg~~~i~~--~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 87 AYTAKLILSK--ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHSEEEEET--TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred hcCCCcccCH--HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999998875 889999999999999999999998764
No 18
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.82 E-value=1.3e-20 Score=154.71 Aligned_cols=103 Identities=12% Similarity=0.195 Sum_probs=91.6
Q ss_pred chhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCC
Q 017954 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTS 97 (363)
Q Consensus 21 s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~ 97 (363)
+.+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||
T Consensus 12 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~~~~f~~ll~~~Ytg 84 (119)
T 2q81_A 12 QHVLEQLNQQRQLGLLCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLDISNAAGLGQVLEFMYTA 84 (119)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGGGCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCCHHHHHHHHHHHcCC
Confidence 3566677776663 7999999 89999999999999999999999863 345888999999999999999999
Q ss_pred CcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 017954 98 RCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLG 132 (363)
Q Consensus 98 ~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~ 132 (363)
.+.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 85 ~~~i~~--~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 85 KLSLSP--ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999885 789999999999999999999999985
No 19
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.81 E-value=4e-21 Score=158.93 Aligned_cols=105 Identities=14% Similarity=0.189 Sum_probs=93.6
Q ss_pred chhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCC-CCHHHHHHHHHhhhC
Q 017954 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILG-VPCGAVSSFVGFLYT 96 (363)
Q Consensus 21 s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~-v~~~~f~~~L~flYt 96 (363)
+.+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+||
T Consensus 17 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~~~~~~f~~~l~~iYt 92 (125)
T 3ohu_A 17 TNILLGLNDQRKKDILCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTKN---DLVVSLPEEVTARGFGPLLQFAYT 92 (125)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCCS---SCEEECCTTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCCC---CcEEEeCCCCCHHHHHHHHHhHcC
Confidence 4667777777764 7999999 89999999999999999999999998765 56799998 999999999999999
Q ss_pred CCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 017954 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGL 131 (363)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L 131 (363)
|.+.++. +++.+++.+|++|+++.|++.|+++|
T Consensus 93 g~~~~~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 93 AKLLLSR--ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp SEEEECT--TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred CceEECH--HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9998875 89999999999999999999987653
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.81 E-value=1.1e-20 Score=157.25 Aligned_cols=106 Identities=13% Similarity=0.201 Sum_probs=87.7
Q ss_pred chhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeC-CCCHHHHHHHHHhhhC
Q 017954 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL-GVPCGAVSSFVGFLYT 96 (363)
Q Consensus 21 s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~-~v~~~~f~~~L~flYt 96 (363)
..+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+||
T Consensus 18 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYt 91 (129)
T 3ga1_A 18 NSILECLNEQRLQGLYCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYT 91 (129)
T ss_dssp HHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhC
Confidence 3566666766654 7999999 89999999999999999999999876 35579996 9999999999999999
Q ss_pred CCcCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhc
Q 017954 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (363)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~ 134 (363)
|.+.++. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 92 g~~~i~~--~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 92 GRLSMNV--GDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp SEEECCT--TTHHHHHHHHHHTTBTTSSCC--------
T ss_pred CccccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9998875 78999999999999999999999998764
No 21
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.78 E-value=1.5e-19 Score=148.52 Aligned_cols=87 Identities=18% Similarity=0.264 Sum_probs=79.3
Q ss_pred CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHHHHHH
Q 017954 34 PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIHLLA 113 (363)
Q Consensus 34 ~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~~Ll~ 113 (363)
+||+|.+ +|+.|+|||.|||++|+||++ ....|.++++++++|+.+|+|+|||.+.++. +++.+++.
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~--~~v~~ll~ 97 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGEGISPSTFAQLLNFVYGESVELQP--GELRPLQE 97 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCSSCCHHHHHHHHHHHTTCCEEECG--GGHHHHHH
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCH--HHHHHHHH
Confidence 7999999 899999999999999999974 2456999999999999999999999998875 89999999
Q ss_pred HHhhcCchhHHHHHHHHHHh
Q 017954 114 LSHVYSVPQLKQRCTKGLGE 133 (363)
Q Consensus 114 lAd~y~v~~Lk~~ce~~L~~ 133 (363)
+|++|+++.|++.|++++..
T Consensus 98 aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 98 AARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHTTCHHHHHHHHHHC--
T ss_pred HHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999998764
No 22
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.76 E-value=3.3e-18 Score=139.75 Aligned_cols=97 Identities=12% Similarity=0.196 Sum_probs=85.3
Q ss_pred cchhHHhHhhccCC---CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhC
Q 017954 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT 96 (363)
Q Consensus 20 ~s~l~~dl~~L~~~---~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt 96 (363)
.+.+..++.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+||
T Consensus 15 ~~~l~~~l~~~~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~~~~~f~~~l~~~Yt 87 (116)
T 3fkc_A 15 SGSLLNSLNEQRGHGLFCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFIRAEIFAEILNYIYS 87 (116)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCCHHHHHHHHHhhcC
Confidence 34666677776663 7999999 89999999999999999999999875 34799999999999999999999
Q ss_pred CCc-CccchHHHHHHHHHHHhhcCchhHHH
Q 017954 97 SRC-TEEEMEKYGIHLLALSHVYSVPQLKQ 125 (363)
Q Consensus 97 ~~~-~~~~~~~~~~~Ll~lAd~y~v~~Lk~ 125 (363)
|.+ .++. +++.+++.+|++|+++.|++
T Consensus 88 g~~~~~~~--~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 88 SKIVRVRS--DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp SCCCSCCH--HHHHHHHHHHHHHTCHHHHT
T ss_pred CCcCCCCH--HHHHHHHHHHHHhCccccCc
Confidence 999 5664 89999999999999999874
No 23
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.47 E-value=2.6e-13 Score=116.77 Aligned_cols=109 Identities=9% Similarity=0.216 Sum_probs=84.9
Q ss_pred EEEEecCCeEEeecHHHHHhccHHHHHhhcC-CCCCCCCCCeEEeCCCCHHHHHHHHHhhhCCC----------------
Q 017954 36 VQILTSGGLRIPVHASILVSASPVLENIIDR-PRKHRSSEKVIPILGVPCGAVSSFVGFLYTSR---------------- 98 (363)
Q Consensus 36 V~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~-~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~---------------- 98 (363)
|+|+++||+.|.+|+.+ |+.|+||++||.+ ++.+.+....|.|++++..++..+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 78887799999999999 8999999999987 55522455689999999999999999999987
Q ss_pred ----------cCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCC---hhhHHHHHHHH
Q 017954 99 ----------CTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLT---IDNVVDVLQLA 147 (363)
Q Consensus 99 ----------~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~---~~n~~~il~lA 147 (363)
+.++ .+++.+|+.+|+++++..|.++|..++...+. ++.+-.++.+.
T Consensus 82 ~~i~~wD~~F~~id--~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~ 141 (159)
T 2ast_A 82 DDIPVWDQEFLKVD--QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 141 (159)
T ss_dssp CCCCHHHHHHTCSC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCC
T ss_pred hhhhHHHHHHHcCC--HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 3333 37899999999999999999999998876654 44444444433
No 24
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.27 E-value=1.8e-11 Score=96.53 Aligned_cols=80 Identities=13% Similarity=0.220 Sum_probs=65.4
Q ss_pred EEEEecCCeEEeecHHHHHhccHHHHHhhcC--CCCCCCCCCeEEeCCCCHHHHHHHHHhhh-----C---CCcC---cc
Q 017954 36 VQILTSGGLRIPVHASILVSASPVLENIIDR--PRKHRSSEKVIPILGVPCGAVSSFVGFLY-----T---SRCT---EE 102 (363)
Q Consensus 36 V~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~--~~~e~s~~~~I~l~~v~~~~f~~~L~flY-----t---~~~~---~~ 102 (363)
|+++.+||++|.+|+.+ |+.|+||++||.+ ++.| +....|.++++++.+++.+++|+| + +.++ ++
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E-~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~ 81 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 81 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccc-cCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCC
Confidence 67888899999999999 9999999999987 4555 456789999999999999999999 5 5555 55
Q ss_pred chHHHHHHHHHHHhhcC
Q 017954 103 EMEKYGIHLLALSHVYS 119 (363)
Q Consensus 103 ~~~~~~~~Ll~lAd~y~ 119 (363)
. +++.+|+.+|++++
T Consensus 82 ~--~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 82 P--EIALELLMAANFLD 96 (97)
T ss_dssp G--GGHHHHHHHHHHHT
T ss_pred H--HHHHHHHHHHhhhC
Confidence 4 88999999999986
No 25
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.14 E-value=1.4e-10 Score=97.68 Aligned_cols=100 Identities=10% Similarity=0.182 Sum_probs=81.8
Q ss_pred EEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCCC-----------------
Q 017954 36 VQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSR----------------- 98 (363)
Q Consensus 36 V~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~----------------- 98 (363)
|++..+||+.|.+|+.+ |..|++|++||.+.. ...|.+++++..+++.+++|+|...
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-----CSSEECTTCCHHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 78888899999999998 899999999998631 3469999999999999999999865
Q ss_pred ---------cCccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCChhhHHHH
Q 017954 99 ---------CTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDV 143 (363)
Q Consensus 99 ---------~~~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~~~n~~~i 143 (363)
+.++ .+++.+|+.+|+++++..|.++|..++...+...++-.+
T Consensus 78 ~i~~wD~~F~~vd--~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eei 129 (141)
T 1fs1_B 78 DIPVWDQEFLKVD--QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEI 129 (141)
T ss_dssp ---HHHHHHTCSC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred hhhHHHHHHHhCC--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 2222 378888999999999999999988888877665554443
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.03 E-value=1e-10 Score=100.62 Aligned_cols=108 Identities=8% Similarity=0.180 Sum_probs=57.5
Q ss_pred CEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCCCcC--------------
Q 017954 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRCT-------------- 100 (363)
Q Consensus 35 DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~~~-------------- 100 (363)
-|+|..+||+.|.+|+.+ |..|++|++||.+.. ....|++++++..++..+++|+|+..-.
T Consensus 5 ~v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 5 KIVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC----VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp ---CCC---------CHH-HHTCTTTC----------------CCTTSCHHHHHHHHHC---------------------
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC----CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 477777799999999998 899999999998752 2346999999999999999999987521
Q ss_pred -----------ccchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcC---ChhhHHHHHHHH
Q 017954 101 -----------EEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERL---TIDNVVDVLQLA 147 (363)
Q Consensus 101 -----------~~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l---~~~n~~~il~lA 147 (363)
+....+++.+|+.+|+++++..|.++|..++...+ +++.+..++.+.
T Consensus 80 ~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~ 140 (160)
T 2p1m_A 80 DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIK 140 (160)
T ss_dssp ---------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCC
T ss_pred cchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 01113678899999999999999999999998887 455555544443
No 27
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.66 E-value=9.2e-08 Score=75.35 Aligned_cols=81 Identities=17% Similarity=0.214 Sum_probs=66.9
Q ss_pred CEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCCC--------------cC
Q 017954 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSR--------------CT 100 (363)
Q Consensus 35 DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~--------------~~ 100 (363)
-|++..+||+.|.+++.+ |..|.+++.||.+++ + +....|++++++..+++.+++|+|... +.
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e-~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R-ESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T-TCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c-cCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 478888899999999997 899999999998865 3 344679999999999999999998743 12
Q ss_pred ccchHHHHHHHHHHHhhcCc
Q 017954 101 EEEMEKYGIHLLALSHVYSV 120 (363)
Q Consensus 101 ~~~~~~~~~~Ll~lAd~y~v 120 (363)
++ .+.+.+|+.+|+++++
T Consensus 82 vd--~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IP--TEMSLELLLAADYLSI 99 (99)
T ss_dssp CC--HHHHHHHHHHHHHHCC
T ss_pred CC--HHHHHHHHHHHHHhCc
Confidence 22 3789999999998875
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.62 E-value=2.8e-07 Score=79.72 Aligned_cols=102 Identities=16% Similarity=0.247 Sum_probs=74.9
Q ss_pred CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCC---CCCCCeEEeCCCCHHHHHHHHHhhhCCCcCc---------
Q 017954 34 PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKH---RSSEKVIPILGVPCGAVSSFVGFLYTSRCTE--------- 101 (363)
Q Consensus 34 ~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e---~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~--------- 101 (363)
.-|+|+.+||+.|.+++.+ |..|.+++.|+.....+ ......|.|++++..++..+++|+|...-..
T Consensus 7 ~~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~ 85 (169)
T 3v7d_A 7 SNVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDS 85 (169)
T ss_dssp CEEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC------
T ss_pred CeEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccccc
Confidence 3588888899999999998 78999999999764221 0123679999999999999999997643210
Q ss_pred --------------cchHHHHHHHHHHHhhcCchhHHHHHHHHHHhcCC
Q 017954 102 --------------EEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLT 136 (363)
Q Consensus 102 --------------~~~~~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l~ 136 (363)
....+.+.+|+.+|++++|..|.++|...+...+.
T Consensus 86 ~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 86 RKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIR 134 (169)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred cccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHc
Confidence 01136788888888888888888888877755433
No 29
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.56 E-value=1.3e-07 Score=73.98 Aligned_cols=81 Identities=12% Similarity=0.217 Sum_probs=63.4
Q ss_pred EEEEecCCeEEeecHHHHHhccHHHHHhhcCC--CCCCCCCCeEEeCCCCHHHHHHHHHhhhCCC-----------cCcc
Q 017954 36 VQILTSGGLRIPVHASILVSASPVLENIIDRP--RKHRSSEKVIPILGVPCGAVSSFVGFLYTSR-----------CTEE 102 (363)
Q Consensus 36 V~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~--~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~-----------~~~~ 102 (363)
|+++.+||..|.+++.+ |..|++++.||.+. +.| +....|++++++..+++.+++|+|... +.++
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e-~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd 80 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 80 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCccc-ccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccC
Confidence 67888899999999997 89999999999863 234 345689999999999999999998643 1233
Q ss_pred chHHHHHHHHHHHhhcCc
Q 017954 103 EMEKYGIHLLALSHVYSV 120 (363)
Q Consensus 103 ~~~~~~~~Ll~lAd~y~v 120 (363)
.+.+.+|+.+|+++++
T Consensus 81 --~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 81 --PEIALELLMAANFLDC 96 (96)
T ss_dssp --TTTHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHhCc
Confidence 3689999999998865
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=1.8e-07 Score=74.35 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=52.6
Q ss_pred HhcCChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhcchhhhhccccChHHHHHHHHH
Q 017954 132 GERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQF 193 (363)
Q Consensus 132 ~~~l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf~~v~~~e~f~~L~~~~p~l~~ell~~ 193 (363)
...++++||++++.+|..|+++.|...|.+||..||.++.++++|..|+.+ .+.+++..
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~---~L~~lL~s 63 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHR---LLTDIISD 63 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHH---HHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHH---HHHHHHcC
Confidence 456899999999999999999999999999999999999999999999866 55555553
No 31
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.25 E-value=2.6e-06 Score=68.46 Aligned_cols=82 Identities=12% Similarity=0.203 Sum_probs=63.8
Q ss_pred CEEEEecCCeEEeecHHHHHhccHHHHHhhcCC--CCCCCCCCeEEeCCCCHHHHHHHHHhhhCCC-----------cCc
Q 017954 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRP--RKHRSSEKVIPILGVPCGAVSSFVGFLYTSR-----------CTE 101 (363)
Q Consensus 35 DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~--~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~-----------~~~ 101 (363)
-|+++..||..|.+.+.+ |..|..++.|+... +.| +....|+|++++..+++.+++|+|... +.+
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e-~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCccc-ccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 478888899999999995 68999999999853 223 334679999999999999999997632 123
Q ss_pred cchHHHHHHHHHHHhhcCc
Q 017954 102 EEMEKYGIHLLALSHVYSV 120 (363)
Q Consensus 102 ~~~~~~~~~Ll~lAd~y~v 120 (363)
+ .+.+.+|+.+|+++++
T Consensus 96 d--~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 A--PEIALELLMAANFLDC 112 (112)
T ss_dssp C--HHHHHHHHHHHHHHTC
T ss_pred C--HHHHHHHHHHHHHhCc
Confidence 3 3789999999999875
No 32
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.19 E-value=7.8e-06 Score=65.12 Aligned_cols=96 Identities=11% Similarity=0.127 Sum_probs=75.2
Q ss_pred CEEEEecCCeEEeecHHHHHhcc-HHHHHhhcCCCC---CCCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHHH
Q 017954 35 DVQILTSGGLRIPVHASILVSAS-PVLENIIDRPRK---HRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIH 110 (363)
Q Consensus 35 DV~~~v~~g~~~~aHk~ILaa~S-~yF~~mf~~~~~---e~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~~ 110 (363)
-|+|.| +|+.|...+..|+... .+|.+||.+... .....+.+-| |-++..|+.+|+|+.+|.+..+. .-....
T Consensus 7 ~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~-~~~~~~ 83 (107)
T 3drz_A 7 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINK-DLAEEG 83 (107)
T ss_dssp EEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCT-TSCHHH
T ss_pred EEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCC-CCCHHH
Confidence 377888 8999999999998764 478999876521 1112345655 78999999999999999987653 123467
Q ss_pred HHHHHhhcCchhHHHHHHHHHHh
Q 017954 111 LLALSHVYSVPQLKQRCTKGLGE 133 (363)
Q Consensus 111 Ll~lAd~y~v~~Lk~~ce~~L~~ 133 (363)
++.-|++|+++.|+..|++.|..
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 89999999999999999988764
No 33
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=98.06 E-value=4.8e-06 Score=65.20 Aligned_cols=84 Identities=20% Similarity=0.491 Sum_probs=62.9
Q ss_pred hhhhHHHHHHHhhhcCCCCCCCcCCCCCCCCCCCCCcchhhhhHhhhhhcccccccCCCChhhHHHHHHHHHHHhhcCCC
Q 017954 217 LSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQS 296 (363)
Q Consensus 217 l~~~~~~l~h~~~~~~~~~~p~~~~~~~~~~~c~~~~~c~~l~~l~~H~~~c~~r~~~gc~~c~r~~~l~~~h~~~c~~~ 296 (363)
+++-+-+|.|+.. |... +. .++....|. .+.|..||.|..|..+|+....-.-++|.-.++|+ .|.+.|.+.
T Consensus 16 iqqqL~lL~HA~k--C~~~---e~-~~g~~~~C~-lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii-~H~k~C~~~ 87 (101)
T 1l3e_B 16 IQQQLVLLLHAHK--CQRR---EQ-ANGEVRQCN-LPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQII-SHWKNCTRH 87 (101)
T ss_dssp HHHHHHHHHHHHH--HHHH---HT-TTSSCCCCS-CHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHH-HHHHHCCSS
T ss_pred HHHHHHHHHHHHH--cCCc---cc-cCCcCCCCC-CCccHHHHHHHHHHHHccCCCCCCCCCCHHHHHHH-HHHHhCCCC
Confidence 4455678899987 7521 00 112246898 89999999999999999874344557899999998 599999998
Q ss_pred CCCcCCcchHhHHHH
Q 017954 297 DSCRVPLCRQFKLKA 311 (363)
Q Consensus 297 ~~c~vp~c~~~k~~~ 311 (363)
+ |+| |..+|+.+
T Consensus 88 ~-CpV--C~pvk~~~ 99 (101)
T 1l3e_B 88 D-CPV--CLPLKNAG 99 (101)
T ss_dssp C-CTT--HHHHHCCS
T ss_pred C-CCc--CHHHHhhh
Confidence 7 966 98888643
No 34
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.98 E-value=0.00098 Score=58.65 Aligned_cols=95 Identities=12% Similarity=0.127 Sum_probs=71.8
Q ss_pred EEEEecCCeEEeecHHHHHhcc-HHHHHhhcCCCC---CCCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHHHH
Q 017954 36 VQILTSGGLRIPVHASILVSAS-PVLENIIDRPRK---HRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIHL 111 (363)
Q Consensus 36 V~~~v~~g~~~~aHk~ILaa~S-~yF~~mf~~~~~---e~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~~L 111 (363)
|+|.| +|..|...+..|.... .+|..||.+... .......+-| |-++..|+.+|.|+-+|.+..+.. -....+
T Consensus 14 V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~-~~~~~l 90 (202)
T 3drx_A 14 VRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-LAEEGV 90 (202)
T ss_dssp EEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT-SCHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC-CCHHHH
Confidence 67888 8999999999997653 378889876421 1112344555 779999999999999999876541 223568
Q ss_pred HHHHhhcCchhHHHHHHHHHHh
Q 017954 112 LALSHVYSVPQLKQRCTKGLGE 133 (363)
Q Consensus 112 l~lAd~y~v~~Lk~~ce~~L~~ 133 (363)
+.-|++|+++.|...|.+.|..
T Consensus 91 ~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 91 LEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHHHHH
Confidence 8899999999999999887754
No 35
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.80 E-value=0.0029 Score=50.74 Aligned_cols=87 Identities=10% Similarity=0.070 Sum_probs=62.5
Q ss_pred CEEEEecCCeEEeecHHHHHhccH-HHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHHHHHH
Q 017954 35 DVQILTSGGLRIPVHASILVSASP-VLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIHLLA 113 (363)
Q Consensus 35 DV~~~v~~g~~~~aHk~ILaa~S~-yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~~Ll~ 113 (363)
=|+|.| +|..|...+..|..... .|.+|+.+........+.+-| |=++..|..+|.|+-+|.+..+.. -....++.
T Consensus 6 ~V~LNV-GG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~-~~~~~~~~ 82 (115)
T 3kvt_A 6 RVIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD-VCGPLFEE 82 (115)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS-SCHHHHHH
T ss_pred EEEEEE-CCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc-ccHHHHHH
Confidence 377888 89999999999976532 445555442111123445655 679999999999999999876541 24578889
Q ss_pred HHhhcCchhHH
Q 017954 114 LSHVYSVPQLK 124 (363)
Q Consensus 114 lAd~y~v~~Lk 124 (363)
-|++|+|+...
T Consensus 83 Ea~fy~i~~~~ 93 (115)
T 3kvt_A 83 ELEFWGLDSNQ 93 (115)
T ss_dssp HHHHHTCCGGG
T ss_pred HHHHhCCChHH
Confidence 99999998854
No 36
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=94.95 E-value=0.035 Score=44.96 Aligned_cols=85 Identities=9% Similarity=0.031 Sum_probs=60.9
Q ss_pred CCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCC---CCCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHHH
Q 017954 34 PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRK---HRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIH 110 (363)
Q Consensus 34 ~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~---e~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~~ 110 (363)
.=|+|.| +|..|..-+..|.... ..||....+ .....+.+-| |=++..|+.+|.|+-+|.+..+.. ..+..
T Consensus 13 ~~V~LNV-GG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNV-SGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECISA 86 (124)
T ss_dssp CEEEEEE-TTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT-SCHHH
T ss_pred CEEEEEe-CCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC-cCHHH
Confidence 3477888 8999999999996543 234433110 0012344555 669999999999999999876542 24788
Q ss_pred HHHHHhhcCchhHH
Q 017954 111 LLALSHVYSVPQLK 124 (363)
Q Consensus 111 Ll~lAd~y~v~~Lk 124 (363)
++.-|++|+|+.+.
T Consensus 87 l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 87 YDDELAFYGILPEI 100 (124)
T ss_dssp HHHHHHHTTCCGGG
T ss_pred HHHHHHHcCCChHH
Confidence 99999999999873
No 37
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.56 E-value=0.033 Score=46.11 Aligned_cols=85 Identities=9% Similarity=0.052 Sum_probs=61.3
Q ss_pred CCCEEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCC---CCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHH
Q 017954 33 EPDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKH---RSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGI 109 (363)
Q Consensus 33 ~~DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e---~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~ 109 (363)
+.-|+|.| +|+.|...+..|.... ..||....+. ....+.+-| |=++..|+.+|+|+-+|.+..... ..+.
T Consensus 34 ~~~V~LNV-GG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~ 107 (140)
T 2nz0_B 34 DELIVLNV-SGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECIS 107 (140)
T ss_dssp CCEEEEEE-TTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT-SCHH
T ss_pred CCEEEEEE-CCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC-cCHH
Confidence 34578888 9999999999997543 3344432110 012345555 679999999999999999876542 2478
Q ss_pred HHHHHHhhcCchhH
Q 017954 110 HLLALSHVYSVPQL 123 (363)
Q Consensus 110 ~Ll~lAd~y~v~~L 123 (363)
.++.-|++|+|+.+
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 88999999999986
No 38
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.36 E-value=0.023 Score=44.21 Aligned_cols=86 Identities=15% Similarity=0.038 Sum_probs=59.0
Q ss_pred EEEEecCCeEEeecHHHHHhccH-HHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHHHHhhhC-CCcCccchHHHHHHHHH
Q 017954 36 VQILTSGGLRIPVHASILVSASP-VLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT-SRCTEEEMEKYGIHLLA 113 (363)
Q Consensus 36 V~~~v~~g~~~~aHk~ILaa~S~-yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~L~flYt-~~~~~~~~~~~~~~Ll~ 113 (363)
|+|.| +|..|...+..|...-. .+.+|+.....-....+.+-| |=++..|+.+|.|+-+ |.+..+.. ..+..++.
T Consensus 3 v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~-~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINV-SGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN-VPLDVFSE 79 (100)
T ss_dssp EEEEE-TTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT-SCHHHHHH
T ss_pred EEEEE-CCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC-CCHHHHHH
Confidence 67888 89999999999965421 222233211000012345656 6799999999999998 88876542 24678899
Q ss_pred HHhhcCchhHH
Q 017954 114 LSHVYSVPQLK 124 (363)
Q Consensus 114 lAd~y~v~~Lk 124 (363)
-|++|+++.+.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998855
No 39
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=93.15 E-value=0.023 Score=44.66 Aligned_cols=82 Identities=6% Similarity=0.039 Sum_probs=59.0
Q ss_pred EEEEecCCeEEeecHHHHHhccHHHHHhhcCCCCC---CCCCCeEEeCCCCHHHHHHHHHhhhCCCcCccchHHHHHHHH
Q 017954 36 VQILTSGGLRIPVHASILVSASPVLENIIDRPRKH---RSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIHLL 112 (363)
Q Consensus 36 V~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~~e---~s~~~~I~l~~v~~~~f~~~L~flYt~~~~~~~~~~~~~~Ll 112 (363)
|+|.| +|+.|...+..|.... .+||....+. ....+.+-| |=++..|+.+|.|+-+|.+..+.. ..+..++
T Consensus 2 V~LNV-GG~~f~t~~~TL~~~p---~s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~-~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNV-SGTRFQTWQDTLERYP---DTLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRH-ECISAYD 75 (105)
T ss_dssp EEEEE-TTEEEEECHHHHHTSC---SSSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTT-SCHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhcCC---CccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCC-cCHHHHH
Confidence 78899 8999999999997643 2344331110 012344555 669999999999999999876542 2467888
Q ss_pred HHHhhcCchhH
Q 017954 113 ALSHVYSVPQL 123 (363)
Q Consensus 113 ~lAd~y~v~~L 123 (363)
.-|++|+++.+
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999886
No 40
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=91.71 E-value=0.19 Score=39.00 Aligned_cols=50 Identities=24% Similarity=0.610 Sum_probs=41.1
Q ss_pred hhhHHHHHHHhhhcCCCCCCCcCCCCCCCCCCCCCcchhhhhHhhhhhcccccccCCCChhhHHHHH
Q 017954 218 SEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQ 284 (363)
Q Consensus 218 ~~~~~~l~h~~~~~~~~~~p~~~~~~~~~~~c~~~~~c~~l~~l~~H~~~c~~r~~~gc~~c~r~~~ 284 (363)
.++..+|.|+.+ |.. ...|. ++.|...+.|+.|...|+. .+|+.|.-++.
T Consensus 48 ~~mK~ll~Hm~~--C~~-----------g~~C~-~~~C~sSr~ii~H~k~C~~---~~CpVC~pvk~ 97 (101)
T 1l3e_B 48 RTMKNVLNHMTH--CQS-----------GKSCQ-VAHCASSRQIISHWKNCTR---HDCPVCLPLKN 97 (101)
T ss_dssp HHHHHHHHHHTT--CCS-----------CSSSS-CHHHHHHHHHHHHHHHCCS---SCCTTHHHHHC
T ss_pred HHHHHHHHHHHH--ccC-----------CCCCC-CCCCHHHHHHHHHHHhCCC---CCCCcCHHHHh
Confidence 466789999966 862 15799 9999999999999999965 58999987653
No 41
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=85.87 E-value=1.8 Score=33.04 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=30.2
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~n 166 (363)
++.+|+.+++.+|..++.+.|.+.|.+|+.++
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999876
No 42
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=84.64 E-value=0.85 Score=36.55 Aligned_cols=50 Identities=26% Similarity=0.633 Sum_probs=39.5
Q ss_pred hHhhhhhcccccccCCCCh--hhHHHHHHHHHHHhhcCCCCCCcCCcchHhHHHHh
Q 017954 259 QLLIRHFATCKKRVNGGCL--RCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQ 312 (363)
Q Consensus 259 ~~l~~H~~~c~~r~~~gc~--~c~r~~~l~~~h~~~c~~~~~c~vp~c~~~k~~~~ 312 (363)
-.++.|...|. .++|. .|..|-.|++ |...|.....|..|.|..+..-+.
T Consensus 17 l~~L~HA~~C~---~~~C~~p~C~~mK~ll~-H~~~C~~r~~~~c~~C~~~~~Ll~ 68 (121)
T 3t92_A 17 IQSLVHAAQCR---NANCSLPSCQKMKRVVQ-HTKGCKRKTNGGCPICKQLIALAA 68 (121)
T ss_dssp HHHHHHHHHCC---CTTCCCHHHHHHHHHHH-HHHHCSSTTTTTCHHHHHHHHHHH
T ss_pred HHHHHHHccCc---CCCCCCchhHHHHHHHH-HHHHccCCCCCCCCchHHHHHHHH
Confidence 34667999995 34565 6999999998 999998755699999988877664
No 43
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=74.88 E-value=3 Score=33.40 Aligned_cols=35 Identities=23% Similarity=0.207 Sum_probs=28.9
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKA 169 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf~~ 169 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.+++..
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 67899999999999999999999999999988754
No 44
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=74.22 E-value=5.4 Score=31.23 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=28.9
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAAS 165 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~ 165 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.+
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 6788999999999999999999999999875
No 45
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=71.68 E-value=9.3 Score=29.55 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 164 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~ 164 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678999999999999999999999999974
No 46
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=71.64 E-value=3.5 Score=32.44 Aligned_cols=30 Identities=27% Similarity=0.623 Sum_probs=23.4
Q ss_pred HHHHHHhhcCCCCCCcCCcchHhHHHHhhhh
Q 017954 285 LLRLHSSMCEQSDSCRVPLCRQFKLKAQLEK 315 (363)
Q Consensus 285 l~~~h~~~c~~~~~c~vp~c~~~k~~~~~~~ 315 (363)
.+-+||..|.+++ |.+|.|..+|.-++...
T Consensus 17 ~~L~HA~~C~~~~-C~~~~C~~mK~ll~H~~ 46 (112)
T 3p57_P 17 QSLVHACQCRNAN-CSLPSCQKMKRVVQHTK 46 (112)
T ss_dssp HHHHHHHHCCCTT-CCCTTHHHHHHHHTCTT
T ss_pred HHHHHHccCCCCC-CCChhhHHHHHHHHHHH
Confidence 3457999998865 99999988888877753
No 47
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=71.64 E-value=5.2 Score=31.08 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=27.6
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~n 166 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 67899999999999999999999999998765
No 48
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=71.27 E-value=9.8 Score=29.15 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=27.9
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 164 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~ 164 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678899999999999999999999999974
No 49
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=70.87 E-value=11 Score=29.11 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=29.4
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~n 166 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 67899999999999999999999999998763
No 50
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=68.55 E-value=13 Score=28.50 Aligned_cols=29 Identities=34% Similarity=0.529 Sum_probs=27.2
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLA 163 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i 163 (363)
++.+|+.+++..|..++.+.|.+.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 67899999999999999999999999986
No 51
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.24 E-value=6.3 Score=30.15 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHhcC
Q 017954 106 KYGIHLLALSHVYSVPQLKQRCTKGLGERL 135 (363)
Q Consensus 106 ~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l 135 (363)
++.+.++.+|+.|+++.|...|..|+..++
T Consensus 11 ~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 11 GNCLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 789999999999999999999999998764
No 52
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=60.09 E-value=2.1 Score=34.40 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=30.1
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf 167 (363)
++.+|+.+++..|..++.+.|.+.|.+|+..++
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999987653
No 53
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=59.83 E-value=4.4 Score=40.42 Aligned_cols=84 Identities=12% Similarity=0.074 Sum_probs=57.2
Q ss_pred CEEEEecCCeEEeecHHHHHhccHHHHHhhcCCC----CCCCCCCeEEeCCCCHHHHHHHHHhhhC-CCcCccchHHHHH
Q 017954 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRPR----KHRSSEKVIPILGVPCGAVSSFVGFLYT-SRCTEEEMEKYGI 109 (363)
Q Consensus 35 DV~~~v~~g~~~~aHk~ILaa~S~yF~~mf~~~~----~e~s~~~~I~l~~v~~~~f~~~L~flYt-~~~~~~~~~~~~~ 109 (363)
=|+|.| +|..|...+..|...- ..+|.... .-....+..-+ |=++..|+.+|.|+.+ |.+..+.. -...
T Consensus 53 ~v~lNV-gG~~f~t~~~tL~~~p---~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~-~~~~ 126 (514)
T 2r9r_B 53 RVVINI-SGLRFETQLKTLAQFP---ETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVN-VPLD 126 (514)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTST---TSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTT-SCHH
T ss_pred EEEEEe-CCEEEEecHHHHhcCC---CCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCc-ccHH
Confidence 477888 8999999999985432 22222210 00012344555 7799999999999999 88875531 2356
Q ss_pred HHHHHHhhcCchhHH
Q 017954 110 HLLALSHVYSVPQLK 124 (363)
Q Consensus 110 ~Ll~lAd~y~v~~Lk 124 (363)
.++.-|++|+++.+.
T Consensus 127 ~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 127 IFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHTTCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 778889999998854
No 54
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=56.91 E-value=11 Score=30.27 Aligned_cols=29 Identities=34% Similarity=0.406 Sum_probs=27.0
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLA 163 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i 163 (363)
++.+|+.+++.+|..++.+.|.+.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 67899999999999999999999999875
No 55
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=55.17 E-value=24 Score=28.70 Aligned_cols=32 Identities=19% Similarity=0.068 Sum_probs=29.3
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~n 166 (363)
++.+++.+++.+|..++.+.|...|.+|+..+
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 131 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALERLKVMCEDALCSN 131 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999864
No 56
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=55.04 E-value=14 Score=29.30 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=26.4
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf 167 (363)
++.+++.+++..|..++.+.|...|.+++..++
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999998764
No 57
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=50.26 E-value=24 Score=27.31 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=27.3
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAAS 165 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~ 165 (363)
++.+|+.+++..|..++.+.|.+.|.+++..
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 6789999999999999999999999998653
No 58
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=45.98 E-value=7.8 Score=30.44 Aligned_cols=32 Identities=3% Similarity=0.045 Sum_probs=23.1
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~n 166 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.+.
T Consensus 96 i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 96 MNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp CCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 78899999999999999999999999998764
No 59
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=41.31 E-value=39 Score=29.62 Aligned_cols=32 Identities=31% Similarity=0.349 Sum_probs=29.1
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~n 166 (363)
++.+|+.+++..|..++.+.|...|.+|+..+
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~ 130 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGC 130 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999865
No 60
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=39.99 E-value=44 Score=29.74 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=30.2
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf 167 (363)
++.+|+.+++..|..++.+.|...|.+|+..++
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l 139 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLKKKL 139 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcC
Confidence 677899999999999999999999999999753
No 61
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=33.61 E-value=30 Score=31.40 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHhcC
Q 017954 106 KYGIHLLALSHVYSVPQLKQRCTKGLGERL 135 (363)
Q Consensus 106 ~~~~~Ll~lAd~y~v~~Lk~~ce~~L~~~l 135 (363)
+++..++.+|+.|+++.|+..|.++|..++
T Consensus 275 ~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~ 304 (312)
T 3hqi_A 275 ENAAEILILADLHSADQLKTQAVDFINYHA 304 (312)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 678999999999999999999999998764
No 62
>4g9q_A 4-carboxymuconolactone decarboxylase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.77A {Sinorhizobium meliloti}
Probab=33.44 E-value=2.1e+02 Score=25.65 Aligned_cols=110 Identities=9% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHhhcCCCCCCCCCCeEEeCCCCHHHHHHH--------HHhhhCCCcC---ccchHHHHHHHHHHHhhcCchhHHHHH
Q 017954 59 VLENIIDRPRKHRSSEKVIPILGVPCGAVSSF--------VGFLYTSRCT---EEEMEKYGIHLLALSHVYSVPQLKQRC 127 (363)
Q Consensus 59 yF~~mf~~~~~e~s~~~~I~l~~v~~~~f~~~--------L~flYt~~~~---~~~~~~~~~~Ll~lAd~y~v~~Lk~~c 127 (363)
||..|+.....- ..+.......++++.++.+ .+|+|++-+. .+.....+..|-.++-.-..+.|+...
T Consensus 19 ~~~~~~~~~~~~-aq~~~~~~~~~~pd~l~~~aP~l~~~~~e~~fG~vw~r~~Ld~k~R~Litla~l~A~g~~~~l~~H~ 97 (269)
T 4g9q_A 19 YFQSMMTTSNAG-AQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQRPGLNRRDRSLVTIAALIARGEAPALTYYA 97 (269)
T ss_dssp --------------CCSCGGGSSSCHHHHHTTCHHHHHHHHHTTTTTGGGCTTSCHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCcccccCCHHHHHhhCcHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_pred HHHHHhcCChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q 017954 128 TKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKA 169 (363)
Q Consensus 128 e~~L~~~l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf~~ 169 (363)
...|...++++.+.+++..+..|.--.-...++..+.+-|.+
T Consensus 98 ~~Al~~G~T~~EI~Evl~q~~~Y~G~P~a~~a~~~~~ev~~e 139 (269)
T 4g9q_A 98 DQALENGVKPSEISETITHLAYYSGWGKAMATVGPVSEAFAK 139 (269)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHTCHHHHHTTHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
No 63
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=27.86 E-value=54 Score=17.90 Aligned_cols=21 Identities=29% Similarity=0.555 Sum_probs=17.0
Q ss_pred HHHHHHHHCCCHHHHHHHHHH
Q 017954 142 DVLQLARLCDAPDLYLRCMKL 162 (363)
Q Consensus 142 ~il~lA~~~~~~~L~~~c~~~ 162 (363)
.++-+|..|..++|...|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 567788899999999888763
No 64
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=26.70 E-value=72 Score=25.99 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=31.1
Q ss_pred cCChhhHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 017954 134 RLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (363)
Q Consensus 134 ~l~~~n~~~il~lA~~~~~~~L~~~c~~~i~~nf 167 (363)
.++.+++.+++..|...+...|.+.|.++++..+
T Consensus 93 ~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i 126 (159)
T 2ast_A 93 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 126 (159)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998754
No 65
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=24.38 E-value=46 Score=18.90 Aligned_cols=16 Identities=38% Similarity=0.491 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHhhhhc
Q 017954 320 GRWRLLVKKVVSAKTI 335 (363)
Q Consensus 320 ~~~~~l~~~~~~~~~~ 335 (363)
..|.-||.||+.|-+-
T Consensus 8 ~Q~~~lveKvq~a~~~ 23 (26)
T 1oeg_A 8 RQWAGLVEKVQAAVGT 23 (26)
T ss_dssp THHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHcc
Confidence 5799999999877553
No 66
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=22.85 E-value=4.9 Score=31.48 Aligned_cols=30 Identities=17% Similarity=0.332 Sum_probs=26.5
Q ss_pred CChhhHHHHHHHHHHCCCHHHHHHHHHHHH
Q 017954 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 164 (363)
Q Consensus 135 l~~~n~~~il~lA~~~~~~~L~~~c~~~i~ 164 (363)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 678899999999999999999999988763
Done!