Query 017955
Match_columns 363
No_of_seqs 260 out of 1734
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 07:36:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017955.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017955hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.6 1.8E-16 6E-21 126.7 6.7 76 256-331 11-90 (91)
2 1x4j_A Ring finger protein 38; 99.6 1.3E-15 4.5E-20 116.8 4.5 65 267-331 6-73 (75)
3 2kiz_A E3 ubiquitin-protein li 99.5 1.4E-14 4.8E-19 109.0 5.2 54 280-333 13-66 (69)
4 1iym_A EL5; ring-H2 finger, ub 99.5 1.1E-14 3.9E-19 104.6 3.7 50 280-329 4-54 (55)
5 2ep4_A Ring finger protein 24; 99.5 1.8E-14 6.3E-19 109.9 4.9 53 279-331 13-65 (74)
6 2ect_A Ring finger protein 126 99.5 2.1E-14 7.1E-19 110.7 4.4 54 280-333 14-67 (78)
7 2ecm_A Ring finger and CHY zin 99.4 1.1E-13 3.9E-18 99.2 4.7 50 280-329 4-54 (55)
8 1v87_A Deltex protein 2; ring- 99.4 5.4E-13 1.8E-17 110.0 6.7 52 280-331 24-95 (114)
9 3dpl_R Ring-box protein 1; ubi 99.4 4.3E-13 1.5E-17 110.5 5.9 50 280-329 36-100 (106)
10 3ng2_A RNF4, snurf, ring finge 99.4 2.1E-13 7.2E-18 102.8 3.8 53 280-332 9-65 (71)
11 2ecl_A Ring-box protein 2; RNF 99.4 1.4E-13 4.7E-18 107.7 2.8 51 280-330 14-76 (81)
12 2ea6_A Ring finger protein 4; 99.4 2.2E-13 7.4E-18 101.9 3.7 51 280-330 14-68 (69)
13 2djb_A Polycomb group ring fin 99.4 5.4E-13 1.8E-17 101.4 5.3 53 279-334 13-66 (72)
14 2xeu_A Ring finger protein 4; 99.4 3.3E-13 1.1E-17 99.4 3.7 52 281-332 3-58 (64)
15 2d8t_A Dactylidin, ring finger 99.3 4E-13 1.4E-17 101.9 2.9 48 280-330 14-61 (71)
16 2ecn_A Ring finger protein 141 99.3 1.9E-13 6.6E-18 103.1 0.3 51 280-334 14-64 (70)
17 1chc_A Equine herpes virus-1 r 99.3 1E-12 3.5E-17 98.3 3.8 49 280-330 4-52 (68)
18 2yur_A Retinoblastoma-binding 99.3 1.4E-12 4.9E-17 99.8 4.7 52 279-333 13-67 (74)
19 2ct2_A Tripartite motif protei 99.3 2E-12 6.8E-17 101.3 5.6 54 279-332 13-70 (88)
20 2csy_A Zinc finger protein 183 99.3 2.6E-12 9E-17 99.7 6.0 48 280-330 14-61 (81)
21 4ayc_A E3 ubiquitin-protein li 99.3 9.8E-13 3.4E-17 112.6 3.9 50 280-332 52-101 (138)
22 2ysl_A Tripartite motif-contai 99.3 2.2E-12 7.4E-17 97.8 4.8 51 279-332 18-71 (73)
23 2ecy_A TNF receptor-associated 99.3 2.1E-12 7.2E-17 96.4 4.4 50 280-332 14-64 (66)
24 1t1h_A Gspef-atpub14, armadill 99.2 3.8E-12 1.3E-16 97.9 4.5 50 280-332 7-57 (78)
25 4a0k_B E3 ubiquitin-protein li 99.2 1.1E-12 3.9E-17 109.8 1.2 50 280-329 47-111 (117)
26 2ecw_A Tripartite motif-contai 99.2 7.2E-12 2.5E-16 97.0 5.5 50 280-332 18-73 (85)
27 3lrq_A E3 ubiquitin-protein li 99.2 2.6E-12 8.8E-17 104.1 2.9 50 280-332 21-72 (100)
28 2ckl_A Polycomb group ring fin 99.2 5.8E-12 2E-16 103.1 4.8 51 278-331 12-63 (108)
29 2d8s_A Cellular modulator of i 99.2 5.6E-12 1.9E-16 98.7 3.7 52 280-332 14-72 (80)
30 2ecv_A Tripartite motif-contai 99.2 8.1E-12 2.8E-16 96.7 4.5 50 280-332 18-73 (85)
31 2egp_A Tripartite motif-contai 99.2 3.6E-12 1.2E-16 97.9 1.1 50 280-332 11-67 (79)
32 2y43_A E3 ubiquitin-protein li 99.2 1.4E-11 4.9E-16 99.1 4.4 49 280-331 21-70 (99)
33 3fl2_A E3 ubiquitin-protein li 99.2 1.5E-11 5.1E-16 103.0 4.6 48 280-330 51-99 (124)
34 2ysj_A Tripartite motif-contai 99.2 2.1E-11 7.1E-16 90.0 4.6 43 279-324 18-63 (63)
35 3ztg_A E3 ubiquitin-protein li 99.2 2E-11 7E-16 96.7 4.6 47 280-329 12-61 (92)
36 4ap4_A E3 ubiquitin ligase RNF 99.1 1.7E-11 5.8E-16 102.4 4.0 54 280-333 6-63 (133)
37 1g25_A CDK-activating kinase a 99.1 4.2E-11 1.4E-15 89.0 4.6 53 281-333 3-58 (65)
38 2ct0_A Non-SMC element 1 homol 99.1 2.7E-11 9.4E-16 93.5 3.5 53 280-334 14-68 (74)
39 1wgm_A Ubiquitin conjugation f 99.1 3E-11 1E-15 98.0 3.7 53 280-335 21-74 (98)
40 1jm7_A BRCA1, breast cancer ty 99.1 3.2E-11 1.1E-15 98.6 3.9 49 281-332 21-72 (112)
41 3hct_A TNF receptor-associated 99.1 2.7E-11 9.1E-16 100.8 3.3 51 279-332 16-67 (118)
42 1z6u_A NP95-like ring finger p 99.1 5.8E-11 2E-15 103.3 4.7 49 280-331 77-126 (150)
43 2kr4_A Ubiquitin conjugation f 99.1 4.1E-11 1.4E-15 94.5 3.4 52 280-334 13-64 (85)
44 2ecj_A Tripartite motif-contai 99.1 3.8E-11 1.3E-15 86.7 2.9 42 280-324 14-58 (58)
45 2ckl_B Ubiquitin ligase protei 99.1 5.2E-11 1.8E-15 104.5 4.4 48 280-330 53-102 (165)
46 4ap4_A E3 ubiquitin ligase RNF 99.1 4.2E-11 1.4E-15 100.0 3.0 55 278-332 69-127 (133)
47 2kre_A Ubiquitin conjugation f 99.1 5.9E-11 2E-15 96.6 3.7 53 280-335 28-80 (100)
48 3l11_A E3 ubiquitin-protein li 99.0 1.9E-11 6.5E-16 101.0 0.1 48 280-330 14-62 (115)
49 1rmd_A RAG1; V(D)J recombinati 99.0 1.1E-10 3.9E-15 96.4 3.5 50 280-332 22-72 (116)
50 1e4u_A Transcriptional repress 99.0 1.9E-10 6.4E-15 89.5 3.4 56 279-334 9-66 (78)
51 1bor_A Transcription factor PM 99.0 9E-11 3.1E-15 85.2 0.7 47 280-332 5-51 (56)
52 2vje_A E3 ubiquitin-protein li 99.0 3.5E-10 1.2E-14 84.4 3.8 48 280-330 7-57 (64)
53 3knv_A TNF receptor-associated 98.9 2.2E-10 7.4E-15 98.7 1.8 49 279-330 29-78 (141)
54 1jm7_B BARD1, BRCA1-associated 98.9 1.8E-10 6E-15 95.7 0.7 48 280-332 21-69 (117)
55 2yu4_A E3 SUMO-protein ligase 98.9 5.9E-10 2E-14 89.3 3.3 51 280-333 6-66 (94)
56 2vje_B MDM4 protein; proto-onc 98.9 8.5E-10 2.9E-14 82.0 3.7 48 280-330 6-56 (63)
57 2y1n_A E3 ubiquitin-protein li 98.9 9.2E-10 3.1E-14 109.2 4.9 48 281-331 332-380 (389)
58 4ic3_A E3 ubiquitin-protein li 98.9 5.8E-10 2E-14 85.4 2.0 45 280-331 23-68 (74)
59 2c2l_A CHIP, carboxy terminus 98.8 9.7E-10 3.3E-14 102.7 3.3 51 280-333 207-258 (281)
60 3hcs_A TNF receptor-associated 98.8 1.3E-09 4.3E-14 96.0 3.5 52 278-332 15-67 (170)
61 2f42_A STIP1 homology and U-bo 98.7 4.2E-09 1.4E-13 94.3 3.5 53 280-335 105-158 (179)
62 2ecg_A Baculoviral IAP repeat- 98.7 4.2E-09 1.4E-13 80.6 2.4 47 280-333 24-71 (75)
63 1vyx_A ORF K3, K3RING; zinc-bi 98.6 3.2E-08 1.1E-12 73.1 3.8 48 280-330 5-59 (60)
64 2bay_A PRE-mRNA splicing facto 98.6 1.7E-08 5.8E-13 74.7 2.3 49 282-333 4-53 (61)
65 2yho_A E3 ubiquitin-protein li 98.6 1.4E-08 4.8E-13 78.8 1.8 45 280-331 17-62 (79)
66 2ea5_A Cell growth regulator w 98.6 3E-08 1E-12 74.8 3.2 45 280-331 14-59 (68)
67 3k1l_B Fancl; UBC, ring, RWD, 98.5 1.1E-08 3.7E-13 99.6 0.7 52 280-331 307-374 (381)
68 3htk_C E3 SUMO-protein ligase 98.5 2.4E-08 8.3E-13 94.0 1.7 55 277-334 177-236 (267)
69 1wim_A KIAA0161 protein; ring 98.5 5.2E-08 1.8E-12 77.5 2.9 51 280-330 4-66 (94)
70 3t6p_A Baculoviral IAP repeat- 98.4 6.7E-08 2.3E-12 94.8 1.8 45 280-331 294-339 (345)
71 3vk6_A E3 ubiquitin-protein li 98.2 1E-06 3.4E-11 71.2 4.1 45 283-329 3-48 (101)
72 3nw0_A Non-structural maintena 97.8 6.9E-06 2.4E-10 76.5 2.6 94 239-334 135-233 (238)
73 2ko5_A Ring finger protein Z; 96.6 0.00052 1.8E-08 54.6 0.9 50 280-334 27-77 (99)
74 4ayb_P DNA-directed RNA polyme 95.0 0.0075 2.5E-07 41.8 1.4 36 23-58 3-38 (48)
75 2jun_A Midline-1; B-BOX, TRIM, 94.4 0.015 5.2E-07 45.9 2.1 34 281-314 3-36 (101)
76 2lri_C Autoimmune regulator; Z 92.2 0.073 2.5E-06 39.5 2.5 46 280-328 11-60 (66)
77 2kdx_A HYPA, hydrogenase/ureas 90.8 0.11 3.9E-06 42.6 2.5 36 19-58 69-105 (119)
78 2lv2_A Insulinoma-associated p 88.6 0.19 6.6E-06 38.7 2.0 40 17-56 22-69 (85)
79 3m62_A Ubiquitin conjugation f 88.5 0.25 8.7E-06 53.9 3.6 51 280-333 890-941 (968)
80 3a43_A HYPD, hydrogenase nicke 86.1 0.25 8.7E-06 41.8 1.6 37 20-56 67-120 (139)
81 1wil_A KIAA1045 protein; ring 85.5 0.43 1.5E-05 37.2 2.4 31 280-314 14-47 (89)
82 2ct7_A Ring finger protein 31; 85.3 0.41 1.4E-05 36.9 2.3 41 19-61 21-61 (86)
83 1f62_A Transcription factor WS 85.0 0.32 1.1E-05 33.6 1.4 44 283-326 2-49 (51)
84 2l5u_A Chromodomain-helicase-D 83.0 0.41 1.4E-05 34.7 1.3 44 280-326 10-57 (61)
85 2eps_A POZ-, at HOOK-, and zin 83.0 0.45 1.5E-05 32.3 1.5 38 18-55 7-53 (54)
86 2lce_A B-cell lymphoma 6 prote 81.5 0.41 1.4E-05 34.4 0.8 41 16-56 10-58 (74)
87 2lv9_A Histone-lysine N-methyl 81.0 0.58 2E-05 37.1 1.6 46 281-327 28-76 (98)
88 3o36_A Transcription intermedi 80.4 0.35 1.2E-05 42.4 0.1 46 281-329 4-53 (184)
89 3h0g_L DNA-directed RNA polyme 80.3 0.63 2.2E-05 34.2 1.4 34 21-57 19-52 (63)
90 1mm2_A MI2-beta; PHD, zinc fin 79.6 0.36 1.2E-05 35.0 -0.1 46 280-328 8-57 (61)
91 1vd4_A Transcription initiatio 79.5 0.83 2.8E-05 32.0 1.9 40 21-60 12-56 (62)
92 2lcq_A Putative toxin VAPC6; P 78.8 0.96 3.3E-05 38.8 2.4 33 21-58 130-162 (165)
93 2k16_A Transcription initiatio 78.0 0.38 1.3E-05 36.0 -0.4 49 280-328 17-69 (75)
94 1fp0_A KAP-1 corepressor; PHD 77.5 0.73 2.5E-05 36.1 1.1 48 279-329 23-74 (88)
95 4gzn_C ZFP-57, zinc finger pro 77.0 0.46 1.6E-05 34.0 -0.1 35 22-56 3-45 (60)
96 3i2d_A E3 SUMO-protein ligase 75.9 1.2 4.3E-05 43.5 2.5 58 280-339 248-309 (371)
97 3u5n_A E3 ubiquitin-protein li 75.7 0.47 1.6E-05 42.5 -0.5 47 280-329 6-56 (207)
98 4fo9_A E3 SUMO-protein ligase 74.4 1.5 5E-05 42.9 2.6 97 237-338 168-274 (360)
99 2cot_A Zinc finger protein 435 74.3 1.7 5.9E-05 31.2 2.4 40 18-57 13-60 (77)
100 1x64_A Alpha-actinin-2 associa 73.8 3.1 0.00011 31.6 3.9 49 5-53 7-61 (89)
101 2yql_A PHD finger protein 21A; 73.6 0.23 8E-06 35.2 -2.5 44 280-326 8-55 (56)
102 1x6e_A Zinc finger protein 24; 73.4 1.4 4.7E-05 31.4 1.6 37 20-56 11-55 (72)
103 1x5w_A Zinc finger protein 64, 72.6 1.1 3.9E-05 31.6 1.0 37 20-56 6-50 (70)
104 2epr_A POZ-, at HOOK-, and zin 72.4 1.3 4.3E-05 29.0 1.1 36 16-51 5-48 (48)
105 1we9_A PHD finger family prote 72.3 0.74 2.5E-05 33.3 -0.1 49 279-327 4-58 (64)
106 2ysm_A Myeloid/lymphoid or mix 71.8 0.97 3.3E-05 36.3 0.5 37 280-316 6-42 (111)
107 3v43_A Histone acetyltransfera 70.7 3.3 0.00011 33.3 3.5 32 281-312 5-42 (112)
108 1xwh_A Autoimmune regulator; P 70.3 0.35 1.2E-05 35.6 -2.3 44 280-326 7-54 (66)
109 1bbo_A Human enhancer-binding 70.1 0.84 2.9E-05 30.7 -0.2 34 23-56 1-42 (57)
110 2cs3_A Protein C14ORF4, MY039 68.9 2.9 0.0001 32.2 2.6 37 280-317 14-52 (93)
111 2ro1_A Transcription intermedi 68.6 1 3.4E-05 39.9 -0.1 43 282-327 3-49 (189)
112 2dmd_A Zinc finger protein 64, 68.4 1.5 5.2E-05 32.6 0.9 37 20-56 5-49 (96)
113 2yt5_A Metal-response element- 67.8 0.42 1.4E-05 34.8 -2.3 50 280-329 5-63 (66)
114 1x4w_A Hypothetical protein FL 67.7 2.8 9.5E-05 31.2 2.2 38 13-54 5-42 (67)
115 3lqh_A Histone-lysine N-methyl 67.1 1.8 6.3E-05 38.2 1.3 49 282-330 3-66 (183)
116 2adr_A ADR1; transcription reg 66.4 1.2 4.2E-05 30.2 0.0 34 23-56 2-43 (60)
117 2ee8_A Protein ODD-skipped-rel 66.3 2.9 9.9E-05 31.7 2.2 39 19-57 13-59 (106)
118 3v43_A Histone acetyltransfera 66.1 1.6 5.6E-05 35.1 0.8 44 283-326 63-111 (112)
119 1twf_L ABC10-alpha, DNA-direct 66.0 2.6 8.9E-05 31.5 1.8 31 18-51 23-53 (70)
120 2gmg_A Hypothetical protein PF 65.9 2.5 8.7E-05 34.1 1.8 31 23-56 67-97 (105)
121 3uk3_C Zinc finger protein 217 64.4 1.3 4.4E-05 29.7 -0.2 34 22-55 3-44 (57)
122 3shb_A E3 ubiquitin-protein li 63.7 1 3.5E-05 34.3 -0.9 44 283-326 28-76 (77)
123 1wfp_A Zinc finger (AN1-like) 63.1 5.8 0.0002 30.0 3.2 32 17-55 19-50 (74)
124 2yw8_A RUN and FYVE domain-con 62.4 4.3 0.00015 30.8 2.5 37 277-313 15-52 (82)
125 2puy_A PHD finger protein 21A; 61.7 0.91 3.1E-05 32.5 -1.4 44 280-326 4-51 (60)
126 1weo_A Cellulose synthase, cat 61.7 9.7 0.00033 29.8 4.3 51 280-330 15-70 (93)
127 1z60_A TFIIH basal transcripti 61.6 2.2 7.4E-05 30.9 0.6 42 282-324 16-58 (59)
128 2lbm_A Transcriptional regulat 61.6 6.9 0.00024 33.1 3.9 44 280-326 62-116 (142)
129 2e6r_A Jumonji/ARID domain-con 61.0 0.5 1.7E-05 37.2 -3.2 47 280-326 15-65 (92)
130 2l43_A N-teminal domain from h 59.9 0.9 3.1E-05 35.4 -1.8 54 280-333 24-81 (88)
131 2epa_A Krueppel-like factor 10 59.6 4.6 0.00016 28.4 2.1 43 14-56 8-62 (72)
132 2e6s_A E3 ubiquitin-protein li 59.3 1.8 6E-05 32.9 -0.2 44 283-326 28-76 (77)
133 3asl_A E3 ubiquitin-protein li 59.0 1.8 6.3E-05 32.1 -0.2 44 283-326 20-68 (70)
134 1wff_A Riken cDNA 2810002D23 p 58.4 9 0.00031 29.7 3.6 30 20-55 22-51 (85)
135 2jvm_A Uncharacterized protein 57.8 4.6 0.00016 31.0 1.8 41 17-57 22-67 (80)
136 1weu_A Inhibitor of growth fam 57.5 4.4 0.00015 31.8 1.7 45 280-328 35-86 (91)
137 1pft_A TFIIB, PFTFIIBN; N-term 57.4 7.3 0.00025 26.5 2.8 36 22-58 4-39 (50)
138 2ct1_A Transcriptional repress 56.9 2.7 9.2E-05 30.2 0.4 36 21-56 13-58 (77)
139 1wen_A Inhibitor of growth fam 56.2 4.9 0.00017 29.9 1.8 45 280-328 15-66 (71)
140 2o35_A Hypothetical protein DU 53.9 4.9 0.00017 32.1 1.5 12 306-317 43-54 (105)
141 3fyb_A Protein of unknown func 53.7 4.9 0.00017 32.0 1.5 12 306-317 42-53 (104)
142 2yt9_A Zinc finger-containing 52.0 4.5 0.00016 29.8 1.0 35 21-55 5-47 (95)
143 2kn9_A Rubredoxin; metalloprot 51.7 14 0.00049 28.3 3.8 28 21-52 25-69 (81)
144 2eod_A TNF receptor-associated 51.6 6.3 0.00022 27.3 1.7 36 20-56 7-50 (66)
145 1joc_A EEA1, early endosomal a 50.4 9.7 0.00033 31.3 2.9 35 279-313 67-102 (125)
146 1wep_A PHF8; structural genomi 50.2 12 0.0004 28.1 3.1 48 280-328 11-64 (79)
147 2jrr_A Uncharacterized protein 50.1 5.1 0.00017 29.7 1.0 41 18-58 10-55 (67)
148 1wfl_A Zinc finger protein 216 50.0 14 0.00047 27.9 3.3 29 20-55 22-50 (74)
149 3ask_A E3 ubiquitin-protein li 49.8 2.8 9.7E-05 38.3 -0.6 44 283-326 176-224 (226)
150 2m0e_A Zinc finger and BTB dom 49.5 5.4 0.00018 21.9 0.9 12 44-55 3-14 (29)
151 2ctd_A Zinc finger protein 512 49.5 5.1 0.00017 30.7 0.9 34 22-55 33-74 (96)
152 2drp_A Protein (tramtrack DNA- 49.4 3 0.0001 28.7 -0.3 35 21-55 8-52 (66)
153 2vpb_A Hpygo1, pygopus homolog 49.0 12 0.00041 27.2 2.9 33 280-312 7-41 (65)
154 2kgg_A Histone demethylase jar 48.6 6.7 0.00023 27.1 1.4 43 283-325 4-52 (52)
155 1wg2_A Zinc finger (AN1-like) 48.6 13 0.00045 27.2 3.0 28 21-55 13-40 (64)
156 2d9h_A Zinc finger protein 692 48.4 4.6 0.00016 28.8 0.5 36 21-56 5-51 (78)
157 1z2q_A LM5-1; membrane protein 48.1 13 0.00043 28.3 3.0 37 278-314 18-55 (84)
158 3t7l_A Zinc finger FYVE domain 47.8 12 0.0004 29.0 2.8 36 280-315 19-55 (90)
159 1llm_C Chimera of ZIF23-GCN4; 47.4 3.9 0.00013 30.1 -0.0 34 23-56 3-44 (88)
160 2kvh_A Zinc finger and BTB dom 47.3 5.8 0.0002 21.8 0.7 12 44-55 4-15 (27)
161 1vq8_Z 50S ribosomal protein L 46.7 7.9 0.00027 29.8 1.6 32 21-54 25-56 (83)
162 2gqj_A Zinc finger protein KIA 46.7 1.9 6.5E-05 32.9 -2.0 36 20-55 21-66 (98)
163 3ql9_A Transcriptional regulat 46.6 17 0.00057 30.3 3.8 44 280-326 56-110 (129)
164 1znf_A 31ST zinc finger from X 46.5 6.1 0.00021 21.5 0.7 13 44-56 2-14 (27)
165 1ard_A Yeast transcription fac 46.3 5.9 0.0002 21.8 0.7 12 44-55 3-14 (29)
166 2d8v_A Zinc finger FYVE domain 46.3 6.8 0.00023 29.0 1.1 31 280-314 7-38 (67)
167 2kwj_A Zinc finger protein DPF 45.9 4.5 0.00016 32.6 0.1 33 282-314 2-41 (114)
168 2zet_C Melanophilin; complex, 45.9 9.2 0.00032 32.7 2.1 46 280-326 67-116 (153)
169 2lvu_A Zinc finger and BTB dom 51.6 4.4 0.00015 22.1 0.0 15 44-58 3-17 (26)
170 2ctu_A Zinc finger protein 483 45.2 5.2 0.00018 27.7 0.4 42 21-62 16-58 (73)
171 1zbd_B Rabphilin-3A; G protein 45.0 10 0.00034 31.7 2.1 33 280-312 54-88 (134)
172 1iml_A CRIP, cysteine rich int 45.0 7.4 0.00025 28.3 1.2 10 283-292 29-38 (76)
173 1rik_A E6APC1 peptide; E6-bind 44.8 6.6 0.00023 21.7 0.7 12 44-55 3-14 (29)
174 2cu8_A Cysteine-rich protein 2 44.7 9.3 0.00032 27.8 1.7 41 281-331 9-49 (76)
175 1f2i_G Fusion of N-terminal 17 44.5 5.8 0.0002 27.8 0.5 36 20-55 16-61 (73)
176 2elx_A Zinc finger protein 406 44.4 6.4 0.00022 23.0 0.7 14 43-56 7-20 (35)
177 2kmk_A Zinc finger protein GFI 44.4 5.6 0.00019 28.2 0.4 34 22-55 28-69 (82)
178 2dlk_A Novel protein; ZF-C2H2 44.2 5.5 0.00019 28.3 0.4 34 22-55 6-52 (79)
179 1klr_A Zinc finger Y-chromosom 44.1 7.5 0.00026 21.4 0.9 12 44-55 3-14 (30)
180 1wfh_A Zinc finger (AN1-like) 43.9 13 0.00043 27.3 2.2 29 20-55 12-40 (64)
181 1p7a_A BF3, BKLF, kruppel-like 43.8 7.6 0.00026 23.1 1.0 13 43-55 11-23 (37)
182 1y02_A CARP2, FYVE-ring finger 43.7 2.4 8.2E-05 35.0 -1.9 47 280-326 18-65 (120)
183 2ysm_A Myeloid/lymphoid or mix 43.4 3 0.0001 33.3 -1.3 45 283-327 56-104 (111)
184 2kvf_A Zinc finger and BTB dom 43.1 7.2 0.00025 21.5 0.7 12 44-55 4-15 (28)
185 2m0d_A Zinc finger and BTB dom 43.0 7 0.00024 21.6 0.6 12 44-55 4-15 (30)
186 2csh_A Zinc finger protein 297 42.9 7.9 0.00027 29.4 1.1 37 21-58 8-52 (110)
187 1vfy_A Phosphatidylinositol-3- 42.5 15 0.00051 27.1 2.6 32 282-313 12-44 (73)
188 1wem_A Death associated transc 42.4 5.2 0.00018 29.8 -0.0 46 281-327 16-70 (76)
189 1x4u_A Zinc finger, FYVE domai 42.3 14 0.00049 27.9 2.5 36 278-313 11-47 (84)
190 2m0f_A Zinc finger and BTB dom 42.2 7.4 0.00025 21.3 0.7 12 44-55 3-14 (29)
191 2byk_A Chrac-16; nucleosome sl 42.1 10 0.00034 32.0 1.7 18 88-105 76-93 (140)
192 2kvg_A Zinc finger and BTB dom 42.0 5.4 0.00018 22.2 -0.0 12 44-55 4-15 (27)
193 2lt7_A Transcriptional regulat 41.9 5.2 0.00018 32.7 -0.1 33 23-55 22-62 (133)
194 1dvp_A HRS, hepatocyte growth 41.8 11 0.00039 33.6 2.1 35 280-314 160-195 (220)
195 1x6h_A Transcriptional repress 40.8 7.4 0.00025 27.9 0.6 36 21-56 13-60 (86)
196 1wfk_A Zinc finger, FYVE domai 40.6 16 0.00054 28.1 2.5 35 280-314 8-43 (88)
197 3o70_A PHD finger protein 13; 40.5 3.2 0.00011 30.6 -1.4 47 279-326 17-66 (68)
198 1a1h_A QGSR zinc finger peptid 40.0 6.7 0.00023 28.4 0.3 11 44-54 63-73 (90)
199 2dmi_A Teashirt homolog 3; zin 39.9 13 0.00046 28.3 2.0 42 21-62 17-71 (115)
200 2epq_A POZ-, at HOOK-, and zin 39.6 6.2 0.00021 24.9 -0.0 30 21-50 8-45 (45)
201 1paa_A Yeast transcription fac 39.6 8.3 0.00028 21.4 0.6 12 44-55 3-14 (30)
202 1srk_A Zinc finger protein ZFP 39.2 8.9 0.0003 22.4 0.7 14 43-56 7-20 (35)
203 2wbt_A B-129; zinc finger; 2.7 39.1 6.3 0.00022 31.0 -0.0 34 22-55 73-112 (129)
204 2lvt_A Zinc finger and BTB dom 45.1 6.4 0.00022 21.9 0.0 16 44-59 3-18 (29)
205 2ri7_A Nucleosome-remodeling f 38.6 5.9 0.0002 33.9 -0.3 46 280-326 7-58 (174)
206 2elt_A Zinc finger protein 406 38.5 9.3 0.00032 22.4 0.7 13 43-55 9-21 (36)
207 2xb1_A Pygopus homolog 2, B-ce 38.4 16 0.00056 29.0 2.4 49 281-329 3-63 (105)
208 6rxn_A Rubredoxin; electron tr 38.4 16 0.00053 25.0 1.9 31 22-52 3-39 (46)
209 3zyq_A Hepatocyte growth facto 38.3 14 0.00047 33.3 2.1 35 280-314 163-198 (226)
210 1rim_A E6APC2 peptide; E6-bind 38.2 10 0.00035 22.2 0.9 12 44-55 3-14 (33)
211 2elq_A Zinc finger protein 406 38.1 9.3 0.00032 22.6 0.7 13 43-55 9-21 (36)
212 2elm_A Zinc finger protein 406 37.5 11 0.00036 22.7 0.9 14 43-56 9-22 (37)
213 2elp_A Zinc finger protein 406 37.2 10 0.00034 22.6 0.7 14 43-56 9-22 (37)
214 2co8_A NEDD9 interacting prote 37.1 18 0.00061 26.8 2.3 43 280-332 14-56 (82)
215 2kfq_A FP1; protein, de novo p 36.7 9.2 0.00031 22.2 0.5 19 44-62 3-21 (32)
216 3mpx_A FYVE, rhogef and PH dom 36.6 7.4 0.00025 37.9 0.0 49 280-328 374-430 (434)
217 2lvr_A Zinc finger and BTB dom 42.7 7.4 0.00025 21.6 0.0 16 44-59 4-19 (30)
218 1s24_A Rubredoxin 2; electron 36.4 19 0.00066 27.9 2.4 29 20-52 32-77 (87)
219 2dj7_A Actin-binding LIM prote 36.3 12 0.00043 27.7 1.3 39 281-329 15-53 (80)
220 3k1f_M Transcription initiatio 36.3 17 0.00057 32.1 2.2 35 21-55 19-54 (197)
221 1wew_A DNA-binding family prot 35.9 6.3 0.00021 29.6 -0.5 48 280-328 15-73 (78)
222 2elr_A Zinc finger protein 406 35.7 11 0.00037 22.1 0.7 13 43-55 9-21 (36)
223 2els_A Zinc finger protein 406 35.6 11 0.00036 22.3 0.6 13 43-55 9-21 (36)
224 2vnf_A ING 4, P29ING4, inhibit 35.6 4.5 0.00015 28.9 -1.3 42 281-326 10-58 (60)
225 4gne_A Histone-lysine N-methyl 35.5 14 0.00047 29.8 1.4 48 280-332 14-67 (107)
226 1wjp_A Zinc finger protein 295 35.4 11 0.00037 28.6 0.8 38 20-57 13-56 (107)
227 2elv_A Zinc finger protein 406 35.2 11 0.00038 22.2 0.7 14 43-56 9-22 (36)
228 2kwj_A Zinc finger protein DPF 35.1 3 0.0001 33.7 -2.6 44 283-326 60-107 (114)
229 2jz8_A Uncharacterized protein 34.7 28 0.00097 27.0 3.0 27 32-59 38-64 (87)
230 4rxn_A Rubredoxin; electron tr 34.0 20 0.00069 25.3 1.9 13 40-52 32-45 (54)
231 2dlq_A GLI-kruppel family memb 33.8 11 0.00037 28.9 0.6 34 21-54 5-46 (124)
232 3c6w_A P28ING5, inhibitor of g 33.0 5.5 0.00019 28.4 -1.2 42 281-326 9-57 (59)
233 1njq_A Superman protein; zinc- 33.0 12 0.00042 22.6 0.6 13 44-56 7-19 (39)
234 1zfo_A LAsp-1; LIM domain, zin 32.1 14 0.00048 22.7 0.8 28 282-311 4-31 (31)
235 3mjh_B Early endosome antigen 31.9 12 0.0004 24.0 0.4 13 321-333 8-20 (34)
236 2elo_A Zinc finger protein 406 31.7 9.3 0.00032 22.7 -0.1 13 43-55 9-21 (37)
237 2ebt_A Krueppel-like factor 5; 31.4 23 0.00079 25.9 2.1 40 16-55 8-59 (100)
238 1x63_A Skeletal muscle LIM-pro 31.2 31 0.0011 25.1 2.8 41 282-331 16-56 (82)
239 2lt7_A Transcriptional regulat 31.2 9.8 0.00033 31.0 -0.1 35 22-56 49-91 (133)
240 2ku3_A Bromodomain-containing 31.0 28 0.00095 25.7 2.4 47 280-326 15-65 (71)
241 1x62_A C-terminal LIM domain p 30.9 33 0.0011 25.0 2.9 35 20-54 12-52 (79)
242 1wd2_A Ariadne-1 protein homol 30.3 5.3 0.00018 28.7 -1.7 37 282-318 7-48 (60)
243 2ghf_A ZHX1, zinc fingers and 30.1 18 0.0006 28.3 1.2 38 19-56 14-63 (102)
244 1x4k_A Skeletal muscle LIM-pro 29.9 33 0.0011 24.2 2.6 41 282-331 6-46 (72)
245 2ep0_A Zinc finger protein 28 29.6 17 0.00058 22.8 0.9 16 21-36 10-25 (46)
246 1faq_A RAF-1; transferase, ser 29.1 17 0.00057 24.6 0.8 24 23-53 14-37 (52)
247 2epv_A Zinc finger protein 268 28.9 16 0.00055 22.7 0.7 15 42-56 11-25 (44)
248 2ytb_A Zinc finger protein 32; 28.7 18 0.00063 21.9 1.0 17 42-58 10-26 (42)
249 2epc_A Zinc finger protein 32; 28.3 17 0.00058 22.1 0.7 15 42-56 10-24 (42)
250 2en7_A Zinc finger protein 268 28.2 17 0.00059 22.4 0.7 15 43-57 12-26 (44)
251 2ytt_A Zinc finger protein 473 28.1 18 0.00063 22.7 0.9 16 21-36 10-25 (46)
252 2el5_A Zinc finger protein 268 27.8 18 0.0006 22.1 0.7 14 43-56 10-23 (42)
253 2yu5_A Zinc finger protein 473 27.7 18 0.00061 22.4 0.7 14 43-56 12-25 (44)
254 1wyh_A SLIM 2, skeletal muscle 27.5 31 0.0011 24.3 2.2 41 282-331 6-46 (72)
255 2dar_A PDZ and LIM domain prot 27.4 25 0.00084 26.4 1.6 40 280-330 24-63 (90)
256 2en2_A B-cell lymphoma 6 prote 27.4 17 0.0006 22.1 0.6 14 43-56 11-24 (42)
257 3iuf_A Zinc finger protein UBI 27.3 17 0.00059 23.4 0.6 14 43-56 7-20 (48)
258 2enf_A Zinc finger protein 347 27.2 18 0.00063 22.6 0.7 16 42-57 11-26 (46)
259 2emi_A Zinc finger protein 484 27.0 18 0.00063 22.6 0.7 15 42-56 11-25 (46)
260 1wev_A Riken cDNA 1110020M19; 26.9 20 0.00068 27.5 1.0 50 280-329 15-74 (88)
261 1a7i_A QCRP2 (LIM1); LIM domai 26.7 14 0.00049 27.1 0.1 40 282-331 8-47 (81)
262 1x4l_A Skeletal muscle LIM-pro 26.6 36 0.0012 24.1 2.3 40 282-330 6-47 (72)
263 2epz_A Zinc finger protein 28 26.6 14 0.0005 23.1 0.1 15 22-36 11-25 (46)
264 1yk4_A Rubredoxin, RD; electro 26.5 30 0.001 24.1 1.8 13 40-52 31-44 (52)
265 2yte_A Zinc finger protein 473 26.5 19 0.00065 21.9 0.7 13 43-55 10-22 (42)
266 2yts_A Zinc finger protein 484 26.5 19 0.00065 22.5 0.7 15 42-56 11-25 (46)
267 1fv5_A First zinc finger of U- 26.4 13 0.00043 23.6 -0.2 14 43-56 8-21 (36)
268 2jmo_A Parkin; IBR, E3 ligase, 26.3 27 0.00094 26.1 1.7 33 23-57 25-64 (80)
269 2fnf_X Putative RAS effector N 26.2 26 0.0009 25.8 1.5 25 21-51 33-57 (72)
270 2ept_A Zinc finger protein 32; 26.1 20 0.00067 21.8 0.7 14 43-56 10-23 (41)
271 2eos_A B-cell lymphoma 6 prote 26.0 23 0.00078 21.6 1.0 15 43-57 11-25 (42)
272 2yti_A Zinc finger protein 347 25.8 20 0.00067 22.4 0.7 16 42-57 11-26 (46)
273 2emg_A Zinc finger protein 484 25.8 20 0.00067 22.4 0.7 14 43-56 12-25 (46)
274 2eoh_A Zinc finger protein 28 25.8 22 0.00074 22.3 0.9 14 43-56 12-25 (46)
275 2con_A RUH-035 protein, NIN on 25.7 31 0.0011 26.3 1.8 32 24-60 16-47 (79)
276 2yth_A Zinc finger protein 224 25.5 23 0.0008 22.1 1.0 14 43-56 12-25 (46)
277 2d8z_A Four and A half LIM dom 25.2 40 0.0014 23.7 2.4 38 282-330 6-43 (70)
278 1m3v_A FLIN4, fusion of the LI 25.1 52 0.0018 26.1 3.3 52 281-332 32-83 (122)
279 2yrm_A B-cell lymphoma 6 prote 25.1 24 0.00083 21.8 1.0 14 43-56 10-23 (43)
280 2eof_A Zinc finger protein 268 25.0 20 0.0007 22.0 0.6 14 43-56 12-25 (44)
281 2en3_A ZFP-95, zinc finger pro 24.9 21 0.00072 22.3 0.7 13 43-55 12-24 (46)
282 1yui_A GAGA-factor; complex (D 24.9 20 0.0007 23.5 0.6 14 42-55 23-36 (54)
283 2ely_A Zinc finger protein 224 24.8 19 0.00066 22.5 0.5 15 22-36 11-25 (46)
284 2ytg_A ZFP-95, zinc finger pro 24.8 16 0.00056 22.9 0.1 15 22-36 11-25 (46)
285 1dl6_A Transcription factor II 24.8 59 0.002 22.9 3.1 32 25-57 13-44 (58)
286 2emz_A ZFP-95, zinc finger pro 24.8 23 0.00079 22.1 0.9 13 43-55 12-24 (46)
287 1v6g_A Actin binding LIM prote 24.7 36 0.0012 24.8 2.1 40 282-332 16-55 (81)
288 2em8_A Zinc finger protein 224 24.6 25 0.00087 21.9 1.1 16 21-36 10-25 (46)
289 2eq1_A Zinc finger protein 347 24.6 23 0.00078 22.1 0.8 14 43-56 12-25 (46)
290 2yqq_A Zinc finger HIT domain- 24.6 50 0.0017 23.4 2.7 25 20-53 9-33 (56)
291 2g6q_A Inhibitor of growth pro 24.4 9.6 0.00033 27.4 -1.2 42 281-326 11-59 (62)
292 2ytp_A Zinc finger protein 484 24.3 22 0.00075 22.3 0.7 14 43-56 12-25 (46)
293 2ytf_A Zinc finger protein 268 24.3 22 0.00076 22.1 0.7 15 42-56 11-25 (46)
294 2yrj_A Zinc finger protein 473 24.2 22 0.00076 22.1 0.7 15 42-56 11-25 (46)
295 2eou_A Zinc finger protein 473 24.2 23 0.0008 21.9 0.8 13 43-55 12-24 (44)
296 2ep1_A Zinc finger protein 484 24.2 23 0.00079 22.0 0.8 15 42-56 11-25 (46)
297 2akl_A PHNA-like protein PA012 24.1 22 0.00076 29.7 0.8 24 26-53 30-54 (138)
298 2epx_A Zinc finger protein 28 24.1 26 0.00088 21.8 1.0 15 43-57 12-26 (47)
299 2row_A RHO-associated protein 24.1 29 0.00099 26.6 1.4 26 24-50 36-61 (84)
300 2emb_A Zinc finger protein 473 24.0 22 0.00075 22.0 0.6 14 43-56 12-25 (44)
301 2yu8_A Zinc finger protein 347 24.0 20 0.00067 22.5 0.4 15 22-36 11-25 (46)
302 1x68_A FHL5 protein; four-and- 23.9 40 0.0014 24.3 2.2 40 282-329 6-46 (76)
303 2eor_A Zinc finger protein 224 23.9 22 0.00075 22.1 0.6 13 43-55 12-24 (46)
304 2em4_A Zinc finger protein 28 23.8 23 0.00078 22.2 0.7 13 43-55 12-24 (46)
305 1dx8_A Rubredoxin; electron tr 23.7 48 0.0016 24.5 2.5 32 21-56 5-56 (70)
306 2i13_A AART; DNA binding, zinc 23.6 17 0.00057 30.5 -0.0 11 44-54 134-144 (190)
307 1nyp_A Pinch protein; LIM doma 23.6 37 0.0013 23.6 1.9 38 282-330 6-43 (66)
308 2eom_A ZFP-95, zinc finger pro 23.6 25 0.00086 22.0 0.9 13 43-55 12-24 (46)
309 2v3b_B Rubredoxin 2, rubredoxi 23.5 37 0.0013 23.9 1.8 12 41-52 33-45 (55)
310 2eow_A Zinc finger protein 347 23.5 23 0.00079 22.0 0.7 15 42-56 11-25 (46)
311 2enh_A Zinc finger protein 28 23.5 23 0.00079 22.1 0.7 14 43-56 12-25 (46)
312 2emj_A Zinc finger protein 28 23.3 24 0.00082 22.1 0.7 14 42-55 11-24 (46)
313 2eq2_A Zinc finger protein 347 23.3 24 0.00081 22.0 0.7 15 42-56 11-25 (46)
314 2eoy_A Zinc finger protein 473 23.3 24 0.00081 22.1 0.7 14 43-56 12-25 (46)
315 3bvo_A CO-chaperone protein HS 23.2 31 0.0011 30.7 1.7 28 21-51 8-35 (207)
316 2jvx_A NF-kappa-B essential mo 23.0 17 0.00059 22.2 -0.0 14 319-332 4-17 (28)
317 2enz_A NPKC-theta, protein kin 23.0 36 0.0012 24.2 1.7 26 23-51 23-48 (65)
318 2l3k_A Rhombotin-2, linker, LI 23.0 33 0.0011 27.3 1.7 37 283-328 10-46 (123)
319 2yto_A Zinc finger protein 484 23.0 24 0.00083 22.0 0.7 14 43-56 12-25 (46)
320 2d8y_A Eplin protein; LIM doma 22.9 43 0.0015 25.0 2.3 41 281-331 15-55 (91)
321 2em6_A Zinc finger protein 224 22.9 25 0.00085 22.0 0.7 14 43-56 12-25 (46)
322 2l4z_A DNA endonuclease RBBP8, 22.9 27 0.00091 28.2 1.1 39 281-329 61-99 (123)
323 2em3_A Zinc finger protein 28 22.7 25 0.00084 21.9 0.7 13 43-55 12-24 (46)
324 2ytm_A Zinc finger protein 28 22.7 17 0.00058 22.9 -0.1 16 21-36 10-25 (46)
325 2el4_A Zinc finger protein 268 22.7 25 0.00086 21.8 0.7 14 43-56 12-25 (46)
326 2emx_A Zinc finger protein 268 22.6 25 0.00086 21.6 0.7 13 43-55 10-22 (44)
327 2em2_A Zinc finger protein 28 22.4 25 0.00087 21.9 0.7 14 43-56 12-25 (46)
328 2ytj_A Zinc finger protein 484 22.3 25 0.00087 21.9 0.7 15 42-56 11-25 (46)
329 2eoq_A Zinc finger protein 224 22.2 28 0.00095 21.7 0.9 15 42-56 11-25 (46)
330 2emy_A Zinc finger protein 268 22.0 26 0.00089 21.8 0.7 15 42-56 11-25 (46)
331 2eon_A ZFP-95, zinc finger pro 22.0 27 0.00091 21.9 0.7 16 42-57 11-26 (46)
332 2ytk_A Zinc finger protein 347 22.0 26 0.00089 21.8 0.7 14 42-55 11-24 (46)
333 2eov_A Zinc finger protein 484 21.9 27 0.00091 21.7 0.7 13 43-55 12-24 (46)
334 2eoe_A Zinc finger protein 347 21.9 18 0.00061 22.6 -0.1 16 21-36 10-25 (46)
335 2en6_A Zinc finger protein 268 21.9 17 0.00059 22.7 -0.2 16 21-36 10-25 (46)
336 2el6_A Zinc finger protein 268 21.9 29 0.00098 21.7 0.9 16 21-36 10-25 (46)
337 2ep3_A Zinc finger protein 484 21.8 26 0.0009 21.8 0.7 16 42-57 11-26 (46)
338 2en9_A Zinc finger protein 28 21.8 26 0.0009 21.9 0.7 13 43-55 12-24 (46)
339 2eq4_A Zinc finger protein 224 21.7 25 0.00087 21.8 0.6 14 43-56 12-25 (46)
340 2emf_A Zinc finger protein 484 21.6 27 0.00092 21.8 0.7 14 43-56 12-25 (46)
341 2ene_A Zinc finger protein 347 21.6 27 0.00092 21.8 0.7 14 43-56 12-25 (46)
342 2emk_A Zinc finger protein 28 21.6 27 0.00094 21.8 0.7 14 42-55 11-24 (46)
343 2epw_A Zinc finger protein 268 21.6 27 0.00092 21.7 0.7 14 43-56 12-25 (46)
344 2eoo_A ZFP-95, zinc finger pro 21.5 27 0.00092 21.8 0.7 14 42-55 11-24 (46)
345 2eml_A Zinc finger protein 28 21.5 27 0.00092 21.7 0.7 15 42-56 11-25 (46)
346 2eop_A Zinc finger protein 268 21.5 27 0.00092 21.7 0.7 14 43-56 12-25 (46)
347 2ema_A Zinc finger protein 347 21.5 27 0.00093 21.7 0.7 15 42-56 11-25 (46)
348 2ytq_A Zinc finger protein 268 21.4 28 0.00095 21.7 0.7 15 42-56 11-25 (46)
349 2eoj_A Zinc finger protein 268 21.4 19 0.00064 22.2 -0.1 14 43-56 12-25 (44)
350 2jp9_A Wilms tumor 1; DNA bind 21.4 20 0.00067 27.3 -0.0 12 43-54 66-77 (119)
351 2em9_A Zinc finger protein 224 21.3 27 0.00094 21.6 0.7 15 42-56 11-25 (46)
352 2emh_A Zinc finger protein 484 21.3 27 0.00091 21.8 0.6 15 42-56 11-25 (46)
353 2ej4_A Zinc finger protein ZIC 21.3 33 0.0011 24.9 1.3 12 44-55 63-74 (95)
354 2eq0_A Zinc finger protein 347 21.3 27 0.00092 21.8 0.6 15 42-56 11-25 (46)
355 1g47_A Pinch protein; LIM doma 21.2 45 0.0015 23.8 2.0 42 281-331 11-52 (77)
356 3ga8_A HTH-type transcriptiona 21.2 16 0.00054 27.2 -0.6 19 37-55 30-48 (78)
357 2ysp_A Zinc finger protein 224 21.0 20 0.00068 22.4 -0.1 16 21-36 10-25 (46)
358 2ep2_A Zinc finger protein 484 21.0 28 0.00096 21.7 0.7 15 42-56 11-25 (46)
359 2em7_A Zinc finger protein 224 21.0 28 0.00096 21.7 0.7 15 42-56 11-25 (46)
360 2e72_A POGO transposable eleme 21.0 38 0.0013 23.4 1.3 20 17-36 6-25 (49)
361 2pv0_B DNA (cytosine-5)-methyl 20.9 46 0.0016 32.7 2.5 45 280-327 92-148 (386)
362 4bbr_M Transcription initiatio 20.8 31 0.0011 33.0 1.2 30 23-54 21-51 (345)
363 2em0_A Zinc finger protein 224 20.8 31 0.0011 21.4 0.9 14 43-56 12-25 (46)
364 1sp2_A SP1F2; zinc finger, tra 20.8 29 0.001 19.4 0.7 13 44-56 3-17 (31)
365 2elz_A Zinc finger protein 224 20.8 29 0.001 21.6 0.7 15 42-56 11-25 (46)
366 2ytn_A Zinc finger protein 347 20.7 29 0.00098 21.6 0.7 15 42-56 11-25 (46)
367 2en8_A Zinc finger protein 224 20.7 28 0.00096 21.6 0.6 15 43-57 12-26 (46)
368 2emm_A ZFP-95, zinc finger pro 20.6 29 0.001 21.5 0.7 14 42-55 11-24 (46)
369 3f2b_A DNA-directed DNA polyme 20.5 33 0.0011 38.0 1.5 36 21-56 500-540 (1041)
370 2d8x_A Protein pinch; LIM doma 20.5 33 0.0011 24.2 1.1 39 282-331 6-44 (70)
371 2ytr_A Zinc finger protein 347 20.5 28 0.00096 21.6 0.6 15 42-56 11-25 (46)
372 2eq3_A Zinc finger protein 347 20.4 19 0.00066 22.4 -0.2 15 42-56 11-25 (46)
373 2rpc_A Zinc finger protein ZIC 20.2 53 0.0018 26.2 2.4 37 18-54 20-73 (155)
374 3f6q_B LIM and senescent cell 20.2 43 0.0015 23.3 1.6 42 281-331 11-52 (72)
375 2eoz_A Zinc finger protein 473 20.0 22 0.00075 22.3 -0.0 14 43-56 12-25 (46)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.64 E-value=1.8e-16 Score=126.71 Aligned_cols=76 Identities=34% Similarity=0.794 Sum_probs=66.3
Q ss_pred CCCCChhhHHHHHcCCceeeeccc----ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 256 RRGAPRAAKSAVLELPTVEILSEQ----ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 256 ~~~~~~~s~~~i~~lp~~~~~~~~----~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
.....++++..|..||.+.+.... ....|+||++.|..+..++.|||+|+||..||.+||+.+.+||+||+.|+..
T Consensus 11 ~~~~~~~s~~~i~~lp~~~~~~~~~~~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~~ 90 (91)
T 2l0b_A 11 MVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPP 90 (91)
T ss_dssp SSCCCCCCHHHHHTSCEEECCTTCSSSSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSCC
T ss_pred CcCCCCCCHHHHHhCCCeeecccccccCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCCC
Confidence 445677899999999998876543 4568999999999888899999999999999999999999999999998753
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=1.3e-15 Score=116.81 Aligned_cols=65 Identities=28% Similarity=0.720 Sum_probs=54.6
Q ss_pred HHcCCceeeecc---cccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 267 VLELPTVEILSE---QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 267 i~~lp~~~~~~~---~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
+..+|...+... .....|+||++.|..+..++.+||+|+||..||.+||+.+.+||+||+.|...
T Consensus 6 i~~lp~~~~~~~~~~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 6 SGQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGPS 73 (75)
T ss_dssp CSSCCCEEBCSSSCSSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCCC
T ss_pred HhhCCcEEecCccccCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCCC
Confidence 445666665542 25678999999999888889999999999999999999999999999998764
No 3
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.50 E-value=1.4e-14 Score=109.04 Aligned_cols=54 Identities=33% Similarity=0.902 Sum_probs=48.7
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCCh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~ 333 (363)
....|+||++.|..+..++.+||+|+||..||.+|++.+.+||+||..|....+
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 66 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCCC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcCC
Confidence 557899999999877788999999999999999999999999999999876543
No 4
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.49 E-value=1.1e-14 Score=104.65 Aligned_cols=50 Identities=42% Similarity=1.046 Sum_probs=45.8
Q ss_pred ccccccccccccccCCceEEeC-CCCcccHhhHHHHHhcCCCCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLP-CGHVYHGDCIVPWLDSRNTCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LP-C~H~Fh~~CI~~WLk~~~sCPlCR~~l~ 329 (363)
....|+||++.|..++.+..++ |+|+||..||.+|++.+.+||+||+.|.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 4567999999999888888898 9999999999999999999999999874
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.8e-14 Score=109.87 Aligned_cols=53 Identities=26% Similarity=0.797 Sum_probs=47.7
Q ss_pred cccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 279 QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
.....|+||++.|.....+..|||+|+||..||.+|++.+.+||+||+.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQL 65 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccc
Confidence 35678999999999888888899999999999999999999999999998653
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.47 E-value=2.1e-14 Score=110.67 Aligned_cols=54 Identities=41% Similarity=1.125 Sum_probs=48.8
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCCh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~ 333 (363)
....|+||++.|.....+..|+|+|+||..||.+|++.+.+||+||..|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 67 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNT 67 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCS
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCccc
Confidence 467899999999877788889999999999999999999999999999987554
No 7
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.42 E-value=1.1e-13 Score=99.23 Aligned_cols=50 Identities=30% Similarity=0.690 Sum_probs=43.8
Q ss_pred ccccccccccccccC-CceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNVG-ETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~~-e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~ 329 (363)
....|+||++.|..+ ..++.++|+|+||..||.+|++.+.+||+||+.|.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 356799999998643 45788899999999999999999999999999885
No 8
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.37 E-value=5.4e-13 Score=109.98 Aligned_cols=52 Identities=23% Similarity=0.561 Sum_probs=42.2
Q ss_pred ccccccccccccccCC---------------ceEEeCCCCcccHhhHHHHH-----hcCCCCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNVGE---------------TATKLPCGHVYHGDCIVPWL-----DSRNTCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e---------------~~~~LPC~H~Fh~~CI~~WL-----k~~~sCPlCR~~l~~~ 331 (363)
.+..|+|||+.|.... .++.++|+|+||..||..|| +.+.+||+||..+...
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 4468999999986432 34478899999999999999 4567999999988654
No 9
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.37 E-value=4.3e-13 Score=110.50 Aligned_cols=50 Identities=32% Similarity=0.606 Sum_probs=43.2
Q ss_pred ccccccccccccccCC---------------ceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNVGE---------------TATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e---------------~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~ 329 (363)
.+..|+||++.|...- .++.++|+|.||..||.+||+.+.+||+||+.+.
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcce
Confidence 5678999999987431 3667899999999999999999999999999864
No 10
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.37 E-value=2.1e-13 Score=102.76 Aligned_cols=53 Identities=34% Similarity=0.763 Sum_probs=45.9
Q ss_pred cccccccccccccc----CCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNV----GETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~----~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
....|+||++.|.. +..++.++|+|.||..||.+|++.+.+||+||..+...+
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 65 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCS
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhh
Confidence 56789999999874 234588999999999999999999999999999998654
No 11
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.4e-13 Score=107.66 Aligned_cols=51 Identities=29% Similarity=0.734 Sum_probs=41.8
Q ss_pred cccccccccccccc-----------CCceEEeC-CCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNV-----------GETATKLP-CGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~-----------~e~~~~LP-C~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
.+..|+||++.|.. ++.++.++ |+|+||..||.+||+++++||+||+.+..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcch
Confidence 45668888888753 34455665 99999999999999999999999998864
No 12
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=2.2e-13 Score=101.88 Aligned_cols=51 Identities=33% Similarity=0.720 Sum_probs=44.2
Q ss_pred ccccccccccccccC----CceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVG----ETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~----e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
....|+||++.|... ..++.++|+|+||..||.+|++.+.+||+||..|..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 567899999998742 344789999999999999999999999999999864
No 13
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=5.4e-13 Score=101.45 Aligned_cols=53 Identities=32% Similarity=0.680 Sum_probs=45.5
Q ss_pred cccccccccccccccCCceEEe-CCCCcccHhhHHHHHhcCCCCCCcCcCCCCCChh
Q 017955 279 QETIVCAICKDTVNVGETATKL-PCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDPE 334 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~L-PC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~~ 334 (363)
.....|+||++.|. .++.+ +|+|.||..||..|++.+.+||+||+.+...++.
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 66 (72)
T 2djb_A 13 TPYILCSICKGYLI---DATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPL 66 (72)
T ss_dssp CGGGSCTTTSSCCS---SCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSC
T ss_pred CCCCCCCCCChHHH---CcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccccc
Confidence 35678999999987 35555 9999999999999999999999999999876543
No 14
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.35 E-value=3.3e-13 Score=99.38 Aligned_cols=52 Identities=31% Similarity=0.692 Sum_probs=45.0
Q ss_pred cccccccccccccC----CceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 281 TIVCAICKDTVNVG----ETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 281 ~~~C~ICle~f~~~----e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
...|+||++.|... ..+..++|+|.||..||.+|++.+.+||+||..+...+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 58 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 58 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccc
Confidence 46799999998742 34578899999999999999999999999999998765
No 15
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=4e-13 Score=101.90 Aligned_cols=48 Identities=33% Similarity=0.627 Sum_probs=43.4
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
....|+||++.|. .++.+||+|+||..||..|++.+.+||+||..|..
T Consensus 14 ~~~~C~IC~~~~~---~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 14 TVPECAICLQTCV---HPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SCCBCSSSSSBCS---SEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCccCCcccC---CCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 4578999999987 56788999999999999999999999999999864
No 16
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.9e-13 Score=103.06 Aligned_cols=51 Identities=31% Similarity=0.826 Sum_probs=45.4
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCChh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDPE 334 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~~ 334 (363)
....|+||++.+.. +.+||+|.||..||.+|++.+.+||+||..+...+..
T Consensus 14 ~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 64 (70)
T 2ecn_A 14 DEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANES 64 (70)
T ss_dssp CCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCC
T ss_pred CCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCcc
Confidence 56789999999874 7899999999999999999999999999999876643
No 17
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.30 E-value=1e-12 Score=98.34 Aligned_cols=49 Identities=29% Similarity=0.745 Sum_probs=43.0
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
....|+||++.+.. .++.+||+|.||..||..|++.+.+||+||..+..
T Consensus 4 ~~~~C~IC~~~~~~--~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 4 VAERCPICLEDPSN--YSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCCCS--CEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCeeCCccccC--CcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHh
Confidence 35679999999872 45789999999999999999999999999998864
No 18
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.30 E-value=1.4e-12 Score=99.77 Aligned_cols=52 Identities=35% Similarity=0.795 Sum_probs=44.3
Q ss_pred cccccccccccccccCCceEEeC-CCCcccHhhHHHHHhcC--CCCCCcCcCCCCCCh
Q 017955 279 QETIVCAICKDTVNVGETATKLP-CGHVYHGDCIVPWLDSR--NTCPVCRFELPTDDP 333 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LP-C~H~Fh~~CI~~WLk~~--~sCPlCR~~l~~~d~ 333 (363)
.....|+||++.|. .++.++ |+|.||..||..|++.+ .+||+||+.+...+.
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~ 67 (74)
T 2yur_A 13 PDELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDA 67 (74)
T ss_dssp CGGGSCSSSCCCCT---TCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTT
T ss_pred CCCCCCcCCChHHh---CCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccc
Confidence 35678999999998 567799 99999999999999876 689999998765554
No 19
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=2e-12 Score=101.25 Aligned_cols=54 Identities=26% Similarity=0.582 Sum_probs=46.2
Q ss_pred cccccccccccccccCCc-eEEeCCCCcccHhhHHHHHhcC---CCCCCcCcCCCCCC
Q 017955 279 QETIVCAICKDTVNVGET-ATKLPCGHVYHGDCIVPWLDSR---NTCPVCRFELPTDD 332 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~-~~~LPC~H~Fh~~CI~~WLk~~---~sCPlCR~~l~~~d 332 (363)
.....|+||++.|..... ++.++|+|.||..||..|++.+ ..||+||+.+...+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 70 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITS 70 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSS
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchh
Confidence 356789999999985443 8889999999999999999886 69999999887654
No 20
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=2.6e-12 Score=99.70 Aligned_cols=48 Identities=17% Similarity=0.490 Sum_probs=43.2
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
....|+||++.|. .++.++|+|+||..||..|++...+||+||..+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 14 IPFRCFICRQAFQ---NPVVTKCRHYFCESCALEHFRATPRCYICDQPTGG 61 (81)
T ss_dssp CCSBCSSSCSBCC---SEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCCS
T ss_pred CCCCCcCCCchhc---CeeEccCCCHhHHHHHHHHHHCCCcCCCcCccccc
Confidence 4578999999997 46779999999999999999999999999999864
No 21
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.30 E-value=9.8e-13 Score=112.56 Aligned_cols=50 Identities=28% Similarity=0.815 Sum_probs=44.7
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++.+||||.||..||..|++.+.+||+||..+....
T Consensus 52 ~~~~C~iC~~~~~---~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 101 (138)
T 4ayc_A 52 NELQCIICSEYFI---EAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKT 101 (138)
T ss_dssp HHSBCTTTCSBCS---SEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCEE
T ss_pred ccCCCcccCcccC---CceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCCC
Confidence 3467999999997 5778999999999999999999999999999997654
No 22
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.2e-12 Score=97.77 Aligned_cols=51 Identities=27% Similarity=0.723 Sum_probs=43.8
Q ss_pred cccccccccccccccCCceEEeCCCCcccHhhHHHHHh---cCCCCCCcCcCCCCCC
Q 017955 279 QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD---SRNTCPVCRFELPTDD 332 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk---~~~sCPlCR~~l~~~d 332 (363)
.....|+||++.|. .++.++|+|.||..||..|++ .+..||+||..+..++
T Consensus 18 ~~~~~C~IC~~~~~---~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 18 QEEVICPICLDILQ---KPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCCBCTTTCSBCS---SEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred ccCCEeccCCcccC---CeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 35678999999988 577789999999999999997 4558999999997654
No 23
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.1e-12 Score=96.39 Aligned_cols=50 Identities=22% Similarity=0.612 Sum_probs=42.7
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHh-cCCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD-SRNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk-~~~sCPlCR~~l~~~d 332 (363)
....|+||++.+. .++.++|+|.||..||.+|++ .+.+||+||..+..++
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 64 (66)
T 2ecy_A 14 DKYKCEKCHLVLC---SPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDK 64 (66)
T ss_dssp CCEECTTTCCEES---SCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTT
T ss_pred cCCCCCCCChHhc---CeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhh
Confidence 5678999999987 455589999999999999994 5669999999997654
No 24
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.25 E-value=3.8e-12 Score=97.85 Aligned_cols=50 Identities=26% Similarity=0.533 Sum_probs=44.3
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhc-CCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS-RNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++.++|||.||..||..|++. +.+||+||..+...+
T Consensus 7 ~~~~C~IC~~~~~---~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~ 57 (78)
T 1t1h_A 7 EYFRCPISLELMK---DPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG 57 (78)
T ss_dssp SSSSCTTTSCCCS---SEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCC
T ss_pred ccCCCCCcccccc---CCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhh
Confidence 4578999999998 5778899999999999999987 779999999997654
No 25
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.24 E-value=1.1e-12 Score=109.82 Aligned_cols=50 Identities=34% Similarity=0.650 Sum_probs=1.2
Q ss_pred ccccccccccccccC-------------C--ceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNVG-------------E--TATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~~-------------e--~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~ 329 (363)
.+..|+||++.|... + .+..++|+|.||..||.+||+.+++||+||+++.
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp CC---------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 567899999999742 1 2334589999999999999999999999999864
No 26
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.23 E-value=7.2e-12 Score=97.00 Aligned_cols=50 Identities=30% Similarity=0.785 Sum_probs=43.7
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhc------CCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS------RNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~------~~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++.++|+|.||..||..|++. ...||+||..+...+
T Consensus 18 ~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecw_A 18 EEVTCPICLELLK---EPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGN 73 (85)
T ss_dssp TTTSCTTTCSCCS---SCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTC
T ss_pred cCCCCcCCChhhC---cceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHh
Confidence 5678999999987 4568999999999999999987 668999999987653
No 27
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.23 E-value=2.6e-12 Score=104.13 Aligned_cols=50 Identities=30% Similarity=0.686 Sum_probs=43.7
Q ss_pred ccccccccccccccCCceEE-eCCCCcccHhhHHHHHhcC-CCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATK-LPCGHVYHGDCIVPWLDSR-NTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~-LPC~H~Fh~~CI~~WLk~~-~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++. ++|+|.||..||..|++.+ .+||+||..+...+
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (100)
T 3lrq_A 21 EVFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRE 72 (100)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CCCCCccCCcccc---CccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHH
Confidence 4578999999997 4666 8999999999999999988 69999999997654
No 28
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.23 E-value=5.8e-12 Score=103.05 Aligned_cols=51 Identities=25% Similarity=0.712 Sum_probs=44.9
Q ss_pred ccccccccccccccccCCceEEe-CCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 278 EQETIVCAICKDTVNVGETATKL-PCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 278 ~~~~~~C~ICle~f~~~e~~~~L-PC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
......|+||++.|. .++.+ +|+|.||..||..|++.+.+||+||..+...
T Consensus 12 ~~~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp HGGGTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred cCCcCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 346688999999997 45666 9999999999999999999999999999865
No 29
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=5.6e-12 Score=98.71 Aligned_cols=52 Identities=25% Similarity=0.721 Sum_probs=43.7
Q ss_pred ccccccccccccccCCceEEeCCC-----CcccHhhHHHHHhcCC--CCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCG-----HVYHGDCIVPWLDSRN--TCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~-----H~Fh~~CI~~WLk~~~--sCPlCR~~l~~~d 332 (363)
....|.||++.|..+..+ ++||+ |+||..||.+||+.++ +||+||..+....
T Consensus 14 ~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 456799999999766554 68996 9999999999998764 8999999997654
No 30
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=8.1e-12 Score=96.70 Aligned_cols=50 Identities=28% Similarity=0.804 Sum_probs=43.6
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhc------CCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS------RNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~------~~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++.++|+|.||..||..|++. ...||+||..+...+
T Consensus 18 ~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecv_A 18 EEVTCPICLELLT---QPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 73 (85)
T ss_dssp CCCCCTTTCSCCS---SCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSS
T ss_pred CCCCCCCCCcccC---CceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHh
Confidence 5678999999987 4567899999999999999987 779999999987643
No 31
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.17 E-value=3.6e-12 Score=97.90 Aligned_cols=50 Identities=28% Similarity=0.713 Sum_probs=43.2
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhc-------CCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS-------RNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~-------~~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++.+||+|.||..||..|++. ...||+||..+...+
T Consensus 11 ~~~~C~IC~~~~~---~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 67 (79)
T 2egp_A 11 EEVTCPICLELLT---EPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67 (79)
T ss_dssp CCCEETTTTEECS---SCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSG
T ss_pred cCCCCcCCCcccC---CeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhh
Confidence 5678999999987 4566899999999999999987 568999999997643
No 32
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.17 E-value=1.4e-11 Score=99.06 Aligned_cols=49 Identities=29% Similarity=0.702 Sum_probs=43.1
Q ss_pred ccccccccccccccCCceEEe-CCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKL-PCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L-PC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
....|+||++.|. .++.+ +|+|.||..||..|++.+.+||+||..+...
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 70 (99)
T 2y43_A 21 DLLRCGICFEYFN---IAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEP 70 (99)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGG
T ss_pred CCCCcccCChhhC---CcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChh
Confidence 4578999999998 45566 8999999999999999999999999998754
No 33
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.17 E-value=1.5e-11 Score=103.02 Aligned_cols=48 Identities=29% Similarity=0.681 Sum_probs=42.6
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC-CCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN-TCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~-sCPlCR~~l~~ 330 (363)
....|+||++.|. .++.+||||.||..||..|++.+. +||+||..+..
T Consensus 51 ~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVF---RPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCS---SEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHc---CcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 4578999999998 677889999999999999998655 89999999976
No 34
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.1e-11 Score=89.99 Aligned_cols=43 Identities=33% Similarity=0.829 Sum_probs=37.5
Q ss_pred cccccccccccccccCCceEEeCCCCcccHhhHHHHHh---cCCCCCCc
Q 017955 279 QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD---SRNTCPVC 324 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk---~~~sCPlC 324 (363)
.....|+||++.|. .++.++|+|.||..||.+|++ .+.+||+|
T Consensus 18 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQ---KPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCS---SCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhC---CeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 35678999999998 577789999999999999998 45589998
No 35
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.15 E-value=2e-11 Score=96.65 Aligned_cols=47 Identities=36% Similarity=0.840 Sum_probs=41.4
Q ss_pred ccccccccccccccCCceEEeC-CCCcccHhhHHHHHhcC--CCCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLP-CGHVYHGDCIVPWLDSR--NTCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LP-C~H~Fh~~CI~~WLk~~--~sCPlCR~~l~ 329 (363)
....|+||++.|. .++.+| |+|.||..||..|++.+ ..||+||..+.
T Consensus 12 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 12 DELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp TTTEETTTTEECS---SCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred cCCCCCCCChhhc---CceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 5678999999998 577899 99999999999999754 48999999973
No 36
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.15 E-value=1.7e-11 Score=102.43 Aligned_cols=54 Identities=33% Similarity=0.730 Sum_probs=46.2
Q ss_pred cccccccccccccc----CCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCCh
Q 017955 280 ETIVCAICKDTVNV----GETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f~~----~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~ 333 (363)
....|+||++.|.. +..++.++|||.||..||.+||+.+++||+||+.+.....
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l 63 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 63 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCE
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccc
Confidence 45789999999873 2345889999999999999999999999999999976553
No 37
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.12 E-value=4.2e-11 Score=88.98 Aligned_cols=53 Identities=21% Similarity=0.403 Sum_probs=41.9
Q ss_pred ccccccccc-ccccCC-ceEEeCCCCcccHhhHHHHHhc-CCCCCCcCcCCCCCCh
Q 017955 281 TIVCAICKD-TVNVGE-TATKLPCGHVYHGDCIVPWLDS-RNTCPVCRFELPTDDP 333 (363)
Q Consensus 281 ~~~C~ICle-~f~~~e-~~~~LPC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~~~d~ 333 (363)
...|+||++ .|.... .+..++|||.||..||.+|+.. +..||+||+.+...+.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 58 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccc
Confidence 467999999 776432 2356799999999999999765 4589999999976553
No 38
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=2.7e-11 Score=93.46 Aligned_cols=53 Identities=26% Similarity=0.644 Sum_probs=43.9
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcC--CCCCCcCcCCCCCChh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR--NTCPVCRFELPTDDPE 334 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~--~sCPlCR~~l~~~d~~ 334 (363)
....|+||++.|..+. ....|+|.||..||.+||+++ .+||+||..+..+.+.
T Consensus 14 ~i~~C~IC~~~i~~g~--~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~~~ 68 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQ--SCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIPK 68 (74)
T ss_dssp SSCBCSSSCCBCSSSE--ECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCCCC
T ss_pred CCCcCcchhhHcccCC--ccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCCCC
Confidence 4567999999998543 233799999999999999988 7999999998876654
No 39
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.11 E-value=3e-11 Score=97.98 Aligned_cols=53 Identities=21% Similarity=0.169 Sum_probs=47.3
Q ss_pred ccccccccccccccCCceEEeCCC-CcccHhhHHHHHhcCCCCCCcCcCCCCCChhH
Q 017955 280 ETIVCAICKDTVNVGETATKLPCG-HVYHGDCIVPWLDSRNTCPVCRFELPTDDPEY 335 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~-H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~~~ 335 (363)
....|+||++.|. .++.++|| |.||+.||.+||+.+.+||+||.++...+...
T Consensus 21 ~~~~CpI~~~~m~---dPV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~p 74 (98)
T 1wgm_A 21 DEFLDPIMSTLMC---DPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRP 74 (98)
T ss_dssp TTTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEE
T ss_pred HhcCCcCcccccc---CCeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceE
Confidence 4678999999998 68889999 99999999999998889999999998776443
No 40
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.11 E-value=3.2e-11 Score=98.63 Aligned_cols=49 Identities=20% Similarity=0.751 Sum_probs=42.3
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC---CCCCcCcCCCCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN---TCPVCRFELPTDD 332 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~---sCPlCR~~l~~~d 332 (363)
...|+||++.|. .++.++|+|.||..||..|++.+. +||+||..+...+
T Consensus 21 ~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 72 (112)
T 1jm7_A 21 ILECPICLELIK---EPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 (112)
T ss_dssp HTSCSSSCCCCS---SCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTT
T ss_pred CCCCcccChhhc---CeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhh
Confidence 467999999987 456689999999999999998764 8999999987654
No 41
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.10 E-value=2.7e-11 Score=100.80 Aligned_cols=51 Identities=27% Similarity=0.616 Sum_probs=44.7
Q ss_pred cccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC-CCCCcCcCCCCCC
Q 017955 279 QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN-TCPVCRFELPTDD 332 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~-sCPlCR~~l~~~d 332 (363)
.....|+||++.|. .++.++|+|.||..||..|++.++ +||+||..+...+
T Consensus 16 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 67 (118)
T 3hct_A 16 ESKYECPICLMALR---EAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQ 67 (118)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred CCCCCCCcCChhhc---CeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHh
Confidence 35678999999997 567789999999999999998876 9999999998754
No 42
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.08 E-value=5.8e-11 Score=103.32 Aligned_cols=49 Identities=24% Similarity=0.668 Sum_probs=43.4
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC-CCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN-TCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~-sCPlCR~~l~~~ 331 (363)
....|+||++.|. .++.+||+|.||..||..|++... .||+||..+...
T Consensus 77 ~~~~C~IC~~~~~---~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVY---QPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCS---SEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhc---CCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 4578999999997 567799999999999999998765 899999999865
No 43
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.08 E-value=4.1e-11 Score=94.52 Aligned_cols=52 Identities=21% Similarity=0.238 Sum_probs=46.5
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCChh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDPE 334 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~~ 334 (363)
....|+||++.|. .++.++|||.||+.||..||+.+.+||+||..+...+..
T Consensus 13 ~~~~CpI~~~~m~---dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~ 64 (85)
T 2kr4_A 13 DEFRDPLMDTLMT---DPVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLE 64 (85)
T ss_dssp TTTBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCE
T ss_pred hheECcccCchhc---CCeECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcc
Confidence 4678999999998 688899999999999999999889999999999876543
No 44
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=3.8e-11 Score=86.68 Aligned_cols=42 Identities=29% Similarity=0.878 Sum_probs=36.0
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHh---cCCCCCCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD---SRNTCPVC 324 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk---~~~sCPlC 324 (363)
....|+||++.|. .++.++|+|+||..||..|++ .+.+||+|
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLK---EPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCS---SCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccC---ccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 5678999999998 456789999999999999954 56789998
No 45
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.08 E-value=5.2e-11 Score=104.50 Aligned_cols=48 Identities=33% Similarity=0.793 Sum_probs=41.5
Q ss_pred ccccccccccccccCCceEEe-CCCCcccHhhHHHHHhc-CCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKL-PCGHVYHGDCIVPWLDS-RNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L-PC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~~ 330 (363)
....|+||++.|. .++.+ +|+|.||..||..|++. +..||+||..+..
T Consensus 53 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLK---NTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhh---CcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 4568999999998 35555 99999999999999997 7789999999864
No 46
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.07 E-value=4.2e-11 Score=100.03 Aligned_cols=55 Identities=33% Similarity=0.732 Sum_probs=46.7
Q ss_pred cccccccccccccccc----CCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 278 EQETIVCAICKDTVNV----GETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 278 ~~~~~~C~ICle~f~~----~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
......|+||++.|.. ...++.++|+|.||..||.+||+.+++||+||..+..++
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhc
Confidence 3466789999999873 234478899999999999999999999999999997654
No 47
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.07 E-value=5.9e-11 Score=96.58 Aligned_cols=53 Identities=19% Similarity=0.224 Sum_probs=47.6
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCChhH
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDPEY 335 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~~~ 335 (363)
....|+||++.|. .++.++|||.||+.||..||..+.+||+||.++...+...
T Consensus 28 ~~~~CpI~~~~m~---dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~p 80 (100)
T 2kre_A 28 DEFRDPLMDTLMT---DPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEP 80 (100)
T ss_dssp TTTBCTTTCSBCS---SEEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEE
T ss_pred HhhCCcCccCccc---CCeECCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceE
Confidence 4678999999998 7888999999999999999998889999999998776544
No 48
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.05 E-value=1.9e-11 Score=100.98 Aligned_cols=48 Identities=25% Similarity=0.675 Sum_probs=42.3
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhc-CCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS-RNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~~ 330 (363)
....|+||++.|. .++.++|+|.||..||..|++. +.+||+||..+..
T Consensus 14 ~~~~C~iC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILV---EPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCS---SCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccC---ceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 4578999999987 5778899999999999999977 6689999999863
No 49
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.02 E-value=1.1e-10 Score=96.44 Aligned_cols=50 Identities=28% Similarity=0.721 Sum_probs=43.6
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhc-CCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS-RNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++.++|+|.||..||..|++. ..+||+||..+...+
T Consensus 22 ~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 22 KSISCQICEHILA---DPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (116)
T ss_dssp HHTBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCcHhc---CcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh
Confidence 3577999999997 5677999999999999999987 679999999987644
No 50
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.98 E-value=1.9e-10 Score=89.53 Aligned_cols=56 Identities=20% Similarity=0.518 Sum_probs=43.1
Q ss_pred cccccccccccccccCC-ceEEeCCCCcccHhhHHHHHhc-CCCCCCcCcCCCCCChh
Q 017955 279 QETIVCAICKDTVNVGE-TATKLPCGHVYHGDCIVPWLDS-RNTCPVCRFELPTDDPE 334 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e-~~~~LPC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~~~d~~ 334 (363)
++...|+||++.+...+ ....++|||.||..||..|++. ...||+||+.+......
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSC
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchh
Confidence 45678999999886432 2223459999999999999854 56899999999876654
No 51
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.96 E-value=9e-11 Score=85.17 Aligned_cols=47 Identities=23% Similarity=0.631 Sum_probs=40.0
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
+...|+||++.|. .++.|||+|.||..||..| ...||+||+.+....
T Consensus 5 ~~~~C~IC~~~~~---~p~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~ 51 (56)
T 1bor_A 5 QFLRCQQCQAEAK---CPKLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGA 51 (56)
T ss_dssp CCSSCSSSCSSCB---CCSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCS
T ss_pred cCCCceEeCCccC---CeEEcCCCCcccHHHHccC---CCCCCcCCcEeecCC
Confidence 5678999999998 5678999999999999884 668999999987543
No 52
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.95 E-value=3.5e-10 Score=84.39 Aligned_cols=48 Identities=23% Similarity=0.500 Sum_probs=41.1
Q ss_pred ccccccccccccccCCceEEe--CCCCc-ccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKL--PCGHV-YHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L--PC~H~-Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
....|+||++.+. .+..+ ||||. ||..|+..|++.+..||+||..+..
T Consensus 7 ~~~~C~IC~~~~~---~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~ 57 (64)
T 2vje_A 7 AIEPCVICQGRPK---NGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQM 57 (64)
T ss_dssp GGSCCTTTSSSCS---CEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCE
T ss_pred CcCCCCcCCCCCC---CEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhc
Confidence 4567999999876 44555 99999 8999999999999999999998853
No 53
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.92 E-value=2.2e-10 Score=98.74 Aligned_cols=49 Identities=24% Similarity=0.613 Sum_probs=42.5
Q ss_pred cccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC-CCCCcCcCCCC
Q 017955 279 QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN-TCPVCRFELPT 330 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~-sCPlCR~~l~~ 330 (363)
.....|+||++.|. .++.++|||.||..||.+|++... +||+||.++..
T Consensus 29 ~~~~~C~IC~~~~~---~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 29 EAKYLCSACRNVLR---RPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY 78 (141)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCC
T ss_pred CcCcCCCCCChhhc---CcEECCCCCccCHHHHHHHHhcCCCCCCCCCCcccc
Confidence 35678999999998 567789999999999999998765 89999998643
No 54
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.91 E-value=1.8e-10 Score=95.67 Aligned_cols=48 Identities=23% Similarity=0.658 Sum_probs=41.7
Q ss_pred ccccccccccccccCCceEEe-CCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKL-PCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L-PC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
....|+||++.|. .++.+ +|||.||..||..|++ ..||+||..+...+
T Consensus 21 ~~~~C~IC~~~~~---~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~ 69 (117)
T 1jm7_B 21 KLLRCSRCTNILR---EPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQD 69 (117)
T ss_dssp HTTSCSSSCSCCS---SCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSS
T ss_pred hCCCCCCCChHhh---CccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCcccc
Confidence 4578999999997 56677 9999999999999998 88999999996544
No 55
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=5.9e-10 Score=89.32 Aligned_cols=51 Identities=33% Similarity=0.716 Sum_probs=42.6
Q ss_pred ccccccccccccccCCceEEeC-CCCcccHhhHHHHHhcC------CCCCC--cCcC-CCCCCh
Q 017955 280 ETIVCAICKDTVNVGETATKLP-CGHVYHGDCIVPWLDSR------NTCPV--CRFE-LPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LP-C~H~Fh~~CI~~WLk~~------~sCPl--CR~~-l~~~d~ 333 (363)
....|+||++.|. .++.++ |||.||+.||..||..+ .+||+ |+.. +...+.
T Consensus 6 ~~~~CPI~~~~~~---dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L 66 (94)
T 2yu4_A 6 SGFTCPITKEEMK---KPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDL 66 (94)
T ss_dssp SCCBCTTTCSBCS---SEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGE
T ss_pred cEeECcCcCchhc---CCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhC
Confidence 5578999999998 678886 99999999999999864 48999 9876 655543
No 56
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.88 E-value=8.5e-10 Score=82.04 Aligned_cols=48 Identities=19% Similarity=0.490 Sum_probs=40.6
Q ss_pred ccccccccccccccCCceEEe--CCCCc-ccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKL--PCGHV-YHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L--PC~H~-Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
....|+||++.+. .+..+ ||||. ||..|+..|.+.+..||+||.++..
T Consensus 6 ~~~~C~IC~~~~~---~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~ 56 (63)
T 2vje_B 6 LLKPCSLCEKRPR---DGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 56 (63)
T ss_dssp GGSBCTTTSSSBS---CEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCE
T ss_pred cCCCCcccCCcCC---CeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhc
Confidence 4567999999876 34455 99998 9999999999988999999998853
No 57
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.88 E-value=9.2e-10 Score=109.23 Aligned_cols=48 Identities=29% Similarity=0.832 Sum_probs=42.8
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHh-cCCCCCCcCcCCCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD-SRNTCPVCRFELPTD 331 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk-~~~sCPlCR~~l~~~ 331 (363)
...|+||++.+. .++.+||+|.||..||..|++ .+.+||+||..+...
T Consensus 332 ~~~C~ICle~~~---~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 332 FQLCKICAENDK---DVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSBCTTTSSSBC---CEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEE
T ss_pred CCCCCccCcCCC---CeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCc
Confidence 368999999987 678899999999999999998 688999999988754
No 58
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.86 E-value=5.8e-10 Score=85.42 Aligned_cols=45 Identities=29% Similarity=0.686 Sum_probs=39.4
Q ss_pred ccccccccccccccCCceEEeCCCCc-ccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHV-YHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~-Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
....|+||++.+. .++.+||+|. ||..||..| ..||+||..+...
T Consensus 23 ~~~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~ 68 (74)
T 4ic3_A 23 EEKLCKICMDRNI---AIVFVPCGHLVTCKQCAEAV----DKCPMCYTVITFK 68 (74)
T ss_dssp HHTBCTTTSSSBC---CEEEETTCCBCCCHHHHTTC----SBCTTTCCBCSEE
T ss_pred cCCCCCCCCCCCC---CEEEcCCCChhHHHHhhhcC----ccCCCcCcCccCc
Confidence 4567999999887 6778999999 999999999 8899999988653
No 59
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.84 E-value=9.7e-10 Score=102.73 Aligned_cols=51 Identities=20% Similarity=0.238 Sum_probs=44.3
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcC-CCCCCcCcCCCCCCh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR-NTCPVCRFELPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~-~sCPlCR~~l~~~d~ 333 (363)
....|+||++.|. .++.+||||.||+.||..||..+ .+||+||.++...+.
T Consensus 207 ~~~~c~i~~~~~~---dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l 258 (281)
T 2c2l_A 207 DYLCGKISFELMR---EPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQL 258 (281)
T ss_dssp STTBCTTTCSBCS---SEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGC
T ss_pred cccCCcCcCCHhc---CCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcC
Confidence 5678999999998 78889999999999999999864 459999999976553
No 60
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.83 E-value=1.3e-09 Score=95.95 Aligned_cols=52 Identities=27% Similarity=0.586 Sum_probs=44.7
Q ss_pred ccccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC-CCCCcCcCCCCCC
Q 017955 278 EQETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN-TCPVCRFELPTDD 332 (363)
Q Consensus 278 ~~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~-sCPlCR~~l~~~d 332 (363)
......|+||++.|. .++.++|+|.||..||.+|++.++ +||+||..|...+
T Consensus 15 ~~~~~~C~IC~~~~~---~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 67 (170)
T 3hcs_A 15 LESKYECPICLMALR---EAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQ 67 (170)
T ss_dssp CCGGGBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCCChhhc---CcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhh
Confidence 335688999999998 567799999999999999998754 9999999998754
No 61
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.73 E-value=4.2e-09 Score=94.30 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=45.5
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcC-CCCCCcCcCCCCCChhH
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR-NTCPVCRFELPTDDPEY 335 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~-~sCPlCR~~l~~~d~~~ 335 (363)
....||||++.|. .++.+||||.||+.||..||..+ .+||+||.++...+...
T Consensus 105 ~~f~CPI~~elm~---DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~p 158 (179)
T 2f42_A 105 DYLCGKISFELMR---EPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIP 158 (179)
T ss_dssp GGGBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEE
T ss_pred HhhcccCccccCC---CCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcc
Confidence 5678999999998 68889999999999999999874 47999999998765443
No 62
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=4.2e-09 Score=80.61 Aligned_cols=47 Identities=28% Similarity=0.663 Sum_probs=38.8
Q ss_pred ccccccccccccccCCceEEeCCCCc-ccHhhHHHHHhcCCCCCCcCcCCCCCCh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHV-YHGDCIVPWLDSRNTCPVCRFELPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~-Fh~~CI~~WLk~~~sCPlCR~~l~~~d~ 333 (363)
....|+||++.+. .++.+||+|. ||..|+.. ...||+||..+.....
T Consensus 24 ~~~~C~IC~~~~~---~~~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~~~~ 71 (75)
T 2ecg_A 24 EEKLCKICMDRNI---AIVFVPCGHLVTCKQCAEA----VDKCPMCYTVITFKQK 71 (75)
T ss_dssp HHHSCSSSCSSCC---CBCCSSSCCCCBCHHHHHH----CSBCTTTCCBCCCCCB
T ss_pred CCCCCCcCCCCCC---CEEEecCCCHHHHHHHhhC----CCCCccCCceecCcEE
Confidence 3467999999987 5677999999 99999954 4789999999876543
No 63
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.58 E-value=3.2e-08 Score=73.10 Aligned_cols=48 Identities=27% Similarity=0.713 Sum_probs=37.8
Q ss_pred ccccccccccccccCCceEEeCCC--C---cccHhhHHHHHhc--CCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCG--H---VYHGDCIVPWLDS--RNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~--H---~Fh~~CI~~WLk~--~~sCPlCR~~l~~ 330 (363)
....|.||++... +. .++||. | +||..||.+|+.. +.+||+||..+..
T Consensus 5 ~~~~CrIC~~~~~--~~-l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 5 DVPVCWICNEELG--NE-RFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp SCCEETTTTEECS--CC-CCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCEeEEeecCCC--Cc-eecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 4567999999743 33 368854 4 9999999999975 5689999998864
No 64
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.57 E-value=1.7e-08 Score=74.74 Aligned_cols=49 Identities=10% Similarity=0.264 Sum_probs=43.6
Q ss_pred ccccccccccccCCceEEe-CCCCcccHhhHHHHHhcCCCCCCcCcCCCCCCh
Q 017955 282 IVCAICKDTVNVGETATKL-PCGHVYHGDCIVPWLDSRNTCPVCRFELPTDDP 333 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~L-PC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~ 333 (363)
..|+||++.|. .++.+ +|||+|.+.||.+||+.+.+||+++.+|...+.
T Consensus 4 ~~CpIs~~~m~---dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~L 53 (61)
T 2bay_A 4 MLCAISGKVPR---RPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEI 53 (61)
T ss_dssp CCCTTTCSCCS---SEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGC
T ss_pred EEecCCCCCCC---CCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhc
Confidence 57999999998 56777 899999999999999988899999999976654
No 65
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.57 E-value=1.4e-08 Score=78.84 Aligned_cols=45 Identities=31% Similarity=0.773 Sum_probs=38.5
Q ss_pred ccccccccccccccCCceEEeCCCCc-ccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHV-YHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~-Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
....|+||++.+. .++.+||||. ||..|+..| ..||+||..+...
T Consensus 17 ~~~~C~IC~~~~~---~~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 17 EAMLCMVCCEEEI---NSTFCPCGHTVCCESCAAQL----QSCPVCRSRVEHV 62 (79)
T ss_dssp HHTBCTTTSSSBC---CEEEETTCBCCBCHHHHTTC----SBCTTTCCBCCEE
T ss_pred CCCEeEEeCcccC---cEEEECCCCHHHHHHHHHhc----CcCCCCCchhhCe
Confidence 3467999999887 6788999999 999999887 4999999988754
No 66
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=3e-08 Score=74.84 Aligned_cols=45 Identities=24% Similarity=0.634 Sum_probs=38.6
Q ss_pred ccccccccccccccCCceEEeCCCCc-ccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHV-YHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~-Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
....|.||++.+. .++.+||+|. ||..|+.. ...||+||..|...
T Consensus 14 ~~~~C~IC~~~~~---~~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 14 NSKDCVVCQNGTV---NWVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQES 59 (68)
T ss_dssp CSSCCSSSSSSCC---CCEETTTTBCCSCTTHHHH----CSSCTTTCCCCCCE
T ss_pred CCCCCCCcCcCCC---CEEEECCCChhhhHHHHhc----CCCCCCCCcchhce
Confidence 4577999999876 6788999999 99999983 57999999998764
No 67
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.55 E-value=1.1e-08 Score=99.63 Aligned_cols=52 Identities=29% Similarity=0.654 Sum_probs=40.2
Q ss_pred cccccccccccccc-CCce---EE-eCCCCcccHhhHHHHHhcC-----------CCCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNV-GETA---TK-LPCGHVYHGDCIVPWLDSR-----------NTCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~-~e~~---~~-LPC~H~Fh~~CI~~WLk~~-----------~sCPlCR~~l~~~ 331 (363)
....|+||+..+.. +..+ .. .+|+|.||..||.+||+.. ++||+||.+|...
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~s 374 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTS 374 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGG
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCcc
Confidence 55689999999886 3322 21 3599999999999999753 4799999988643
No 68
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.50 E-value=2.4e-08 Score=93.99 Aligned_cols=55 Identities=22% Similarity=0.434 Sum_probs=44.6
Q ss_pred cccccccccccccccccCCceEE-eCCCCcccHhhHHHHHhcC--CCCCC--cCcCCCCCChh
Q 017955 277 SEQETIVCAICKDTVNVGETATK-LPCGHVYHGDCIVPWLDSR--NTCPV--CRFELPTDDPE 334 (363)
Q Consensus 277 ~~~~~~~C~ICle~f~~~e~~~~-LPC~H~Fh~~CI~~WLk~~--~sCPl--CR~~l~~~d~~ 334 (363)
.......||||++.|. .++. +.|||.||+.||..|++.+ .+||+ ||+.+...+..
T Consensus 177 ~~~~el~CPIcl~~f~---DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~ 236 (267)
T 3htk_C 177 GGKIELTCPITCKPYE---APLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFV 236 (267)
T ss_dssp SSBCCSBCTTTSSBCS---SEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEE
T ss_pred CCceeeECcCccCccc---CCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCC
Confidence 3446688999999998 4554 5899999999999999865 37999 99988766643
No 69
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.48 E-value=5.2e-08 Score=77.53 Aligned_cols=51 Identities=20% Similarity=0.494 Sum_probs=39.3
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcC--------CCCCC--cCcC--CCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR--------NTCPV--CRFE--LPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~--------~sCPl--CR~~--l~~ 330 (363)
....|+||++.+........++|+|.||..||..|++.+ -.||. ||.. +..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~ 66 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQE 66 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECH
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCH
Confidence 346799999998754344444799999999999998742 37999 9998 543
No 70
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.39 E-value=6.7e-08 Score=94.75 Aligned_cols=45 Identities=29% Similarity=0.745 Sum_probs=39.7
Q ss_pred ccccccccccccccCCceEEeCCCCc-ccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHV-YHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~-Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
....|+||++.+. .++.+||+|. ||..||..| ..||+||..+...
T Consensus 294 ~~~~C~IC~~~~~---~~v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~~ 339 (345)
T 3t6p_A 294 EERTCKVCMDKEV---SVVFIPCGHLVVCQECAPSL----RKCPICRGIIKGT 339 (345)
T ss_dssp TTCBCTTTSSSBC---CEEEETTCCEEECTTTGGGC----SBCTTTCCBCCEE
T ss_pred CCCCCCccCCcCC---ceEEcCCCChhHhHHHHhcC----CcCCCCCCCccCe
Confidence 5678999999987 6788999999 999999988 7899999988653
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.19 E-value=1e-06 Score=71.18 Aligned_cols=45 Identities=27% Similarity=0.643 Sum_probs=38.6
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhc-CCCCCCcCcCCC
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS-RNTCPVCRFELP 329 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~ 329 (363)
.|.+|--.+.. ..+.+||+|+||.+|+..|.++ .++||.||.+|.
T Consensus 3 fC~~C~~Pi~i--ygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 3 FCDKCGLPIKV--YGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp BCTTTCSBCSE--EEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred ecCccCCCeEE--EeeeccccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 58888877763 6788999999999999999965 579999999875
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.80 E-value=6.9e-06 Score=76.47 Aligned_cols=94 Identities=22% Similarity=0.417 Sum_probs=57.6
Q ss_pred hhhHHHHHHHHHHhc--CCCCCCChhhHHHHHcCCceeee-cccccccccccccccccCCceEEeCCCCcccHhhHHHHH
Q 017955 239 AAGYEALLQNLAESD--GGRRGAPRAAKSAVLELPTVEIL-SEQETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWL 315 (363)
Q Consensus 239 ~~~~e~Ll~~L~~~~--~~~~~~~~~s~~~i~~lp~~~~~-~~~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WL 315 (363)
....+.+|..|.+.. ....+.-..+...+..|...... -......|.||.+.+..+ ..+-.|+|.||..|+.+|+
T Consensus 135 ~~eae~lL~~lv~~gWl~~~~g~~~l~~R~l~El~~~l~~~~~~~i~~C~iC~~iv~~g--~~C~~C~~~~H~~C~~~~~ 212 (238)
T 3nw0_A 135 KKEAEQVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYIRETYPDAVKICNICHSLLIQG--QSCETCGIRMHLPCVAKYF 212 (238)
T ss_dssp HHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHHHHHHHHHCTTTCCBCTTTCSBCSSC--EECSSSCCEECHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcchhhhCCEEEecCccHHHHHHHHHHhcCCCCCcCcchhhHHhCC--cccCccChHHHHHHHHHHH
Confidence 445566777666554 11223222333332222211111 112357799999988843 2222399999999999999
Q ss_pred hcCC--CCCCcCcCCCCCChh
Q 017955 316 DSRN--TCPVCRFELPTDDPE 334 (363)
Q Consensus 316 k~~~--sCPlCR~~l~~~d~~ 334 (363)
+.+. .||.|+..++...+.
T Consensus 213 ~~~~~~~CP~C~~~W~~~~~~ 233 (238)
T 3nw0_A 213 QSNAEPRCPHCNDYWPHEIPK 233 (238)
T ss_dssp TTCSSCBCTTTCCBCCSCCCC
T ss_pred HhCCCCCCCCCCCCCCCCCCC
Confidence 8765 899999998876553
No 73
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=96.56 E-value=0.00052 Score=54.56 Aligned_cols=50 Identities=26% Similarity=0.568 Sum_probs=41.5
Q ss_pred ccccccccccccccCCceEEeCC-CCcccHhhHHHHHhcCCCCCCcCcCCCCCChh
Q 017955 280 ETIVCAICKDTVNVGETATKLPC-GHVYHGDCIVPWLDSRNTCPVCRFELPTDDPE 334 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC-~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~~ 334 (363)
.-..|-.|.-..+ ..+.| .|++|+.||.-.|..+..||+|.++|+++-..
T Consensus 27 G~~nCKsCWf~~k-----~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~ 77 (99)
T 2ko5_A 27 GPQFCKSCWFENK-----GLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRP 77 (99)
T ss_dssp CCCCCCSSCSCCS-----SEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCT
T ss_pred CcccChhhccccC-----CeeeecchhhHHHHHHHHHhhccCCcccCCcCCcceec
Confidence 4467999987765 34456 69999999999999999999999999998654
No 74
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=95.05 E-value=0.0075 Score=41.80 Aligned_cols=36 Identities=31% Similarity=0.535 Sum_probs=30.3
Q ss_pred ceeeeecCCcceeeeccCCCceecccCCCCceeecc
Q 017955 23 QYWCHHCEKRVSIETLANLPDVICHECKNGFVESIP 58 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~~~ 58 (363)
.|-|-+|.+.|+.+-...||.+.||+|+---|-.+-
T Consensus 3 iY~C~rCg~~fs~~el~~lP~IrCpyCGyrii~KvR 38 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVLPGVRCPYCGYKIIFMVR 38 (48)
T ss_dssp --CCCCTTTTCCCCCSCCCSSSCCTTTCCSCEECCC
T ss_pred EEEeeccCCCccHHHHhhCCCcccCccCcEEEEEec
Confidence 689999999999999999999999999977776653
No 75
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=94.44 E-value=0.015 Score=45.95 Aligned_cols=34 Identities=18% Similarity=0.533 Sum_probs=26.5
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHH
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPW 314 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~W 314 (363)
+..|.||++.+........+.|+|.||..||..|
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHH
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHHH
Confidence 4679999987543334455899999999999983
No 76
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=92.20 E-value=0.073 Score=39.52 Aligned_cols=46 Identities=24% Similarity=0.528 Sum_probs=33.7
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCcCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~~l 328 (363)
....|.||.+. ++.+..-.|...||..|+.+.|.... .||.|+...
T Consensus 11 ~~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 11 PGARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TTCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 34569999853 33444445999999999998887643 799997643
No 77
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=90.80 E-value=0.11 Score=42.61 Aligned_cols=36 Identities=19% Similarity=0.435 Sum_probs=26.6
Q ss_pred CCCCceeeeecCCcceeeeccCCCce-ecccCCCCceeecc
Q 017955 19 TDPTQYWCHHCEKRVSIETLANLPDV-ICHECKNGFVESIP 58 (363)
Q Consensus 19 ~~~~~~~C~~C~~~~~~~~~~~~~~~-~c~~C~~gFve~~~ 58 (363)
..+..|||..|...+.. .-+.+ .||.|++..++-+.
T Consensus 69 ~~p~~~~C~~CG~~~e~----~~~~~~~CP~Cgs~~~~i~~ 105 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKP----NALDYGVCEKCHSKNVIITQ 105 (119)
T ss_dssp EECCEEECSSSSCEECS----CCSTTCCCSSSSSCCCEEEE
T ss_pred eccceEEcCCCCCEEeC----CCCCCCcCccccCCCcEEec
Confidence 34679999999955544 44567 89999998776443
No 78
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=88.55 E-value=0.19 Score=38.67 Aligned_cols=40 Identities=15% Similarity=0.274 Sum_probs=30.1
Q ss_pred CCCCCCceeeeecCCcceeeecc--------CCCceecccCCCCceee
Q 017955 17 SDTDPTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVES 56 (363)
Q Consensus 17 ~~~~~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~ 56 (363)
..+....|-|..|.|.|...... ...-|.|+.|++.|...
T Consensus 22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~ 69 (85)
T 2lv2_A 22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS 69 (85)
T ss_dssp SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSH
T ss_pred CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCH
Confidence 33456789999999998875332 24569999999999754
No 79
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=88.52 E-value=0.25 Score=53.94 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=44.7
Q ss_pred ccccccccccccccCCceEEeCCC-CcccHhhHHHHHhcCCCCCCcCcCCCCCCh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCG-HVYHGDCIVPWLDSRNTCPVCRFELPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~-H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d~ 333 (363)
+...|||-++.|. .++++|.| +.|-+.+|.+||..+.+||+=|.++...+.
T Consensus 890 ~~F~cPIs~~lM~---DPVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~l 941 (968)
T 3m62_A 890 DEFLDPLMYTIMK---DPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDV 941 (968)
T ss_dssp GGGBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGC
T ss_pred HHhCCcchhhHHh---CCeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcccc
Confidence 3467999999998 78899997 589999999999999999999999987653
No 80
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=86.15 E-value=0.25 Score=41.80 Aligned_cols=37 Identities=16% Similarity=0.425 Sum_probs=25.6
Q ss_pred CCCceeeeecCCcceeee-----------c-cCCC-----ceecccCCCCceee
Q 017955 20 DPTQYWCHHCEKRVSIET-----------L-ANLP-----DVICHECKNGFVES 56 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~-----------~-~~~~-----~~~c~~C~~gFve~ 56 (363)
.+.++||..|...+...- . .-.| .+.||.|++.-++-
T Consensus 67 ~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~~~i 120 (139)
T 3a43_A 67 EEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDFEV 120 (139)
T ss_dssp ECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCCEEE
T ss_pred cCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCccEE
Confidence 477999999996655433 1 1112 67899999987763
No 81
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=85.49 E-value=0.43 Score=37.18 Aligned_cols=31 Identities=23% Similarity=0.712 Sum_probs=22.3
Q ss_pred ccccccccccccccCCceEEeC---CCCcccHhhHHHH
Q 017955 280 ETIVCAICKDTVNVGETATKLP---CGHVYHGDCIVPW 314 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LP---C~H~Fh~~CI~~W 314 (363)
.+..|.||-- |..+ .++| |+.+||..|+.+-
T Consensus 14 ~D~~C~VC~~-~t~~---~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 14 NDEMCDVCEV-WTAE---SLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CSCCCTTTCC-CCSS---CCSSCSSSSSCCCHHHHHHH
T ss_pred CCcccCcccc-cccc---ceeccccccccccHhhcccc
Confidence 4678999973 2322 2344 8999999999996
No 82
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=85.30 E-value=0.41 Score=36.94 Aligned_cols=41 Identities=22% Similarity=0.547 Sum_probs=30.5
Q ss_pred CCCCceeeeecCCcceeeeccCCCceecccCCCCceeeccCCC
Q 017955 19 TDPTQYWCHHCEKRVSIETLANLPDVICHECKNGFVESIPVTL 61 (363)
Q Consensus 19 ~~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~~~~~~ 61 (363)
..+..+||..|+..|... +..+.++||.|+.-|-=.=..+-
T Consensus 21 ~~~~~~wCP~C~~~~~~~--~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 21 RDPKFLWCAQCSFGFIYE--REQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp SCCCEECCSSSCCCEECC--CSCSCEECTTTCCEECSSSCSBC
T ss_pred cCCCEeECcCCCchheec--CCCCceEeCCCCCccccccCCch
Confidence 356678999999776544 34567999999999986655554
No 83
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=84.99 E-value=0.32 Score=33.62 Aligned_cols=44 Identities=23% Similarity=0.533 Sum_probs=29.5
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
.|.||...-..+..+..-.|...||..|+.+=|.... .||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 4889987543333444445999999999976444322 5999965
No 84
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=83.03 E-value=0.41 Score=34.67 Aligned_cols=44 Identities=27% Similarity=0.658 Sum_probs=31.3
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
....|.||... ++.+..-.|...||..|+..-+.... .||.|+.
T Consensus 10 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 10 HQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 45679999873 33444445889999999988554322 7999965
No 85
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=82.98 E-value=0.45 Score=32.27 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=27.2
Q ss_pred CCCCCceeeeecCCcceeee---------ccCCCceecccCCCCcee
Q 017955 18 DTDPTQYWCHHCEKRVSIET---------LANLPDVICHECKNGFVE 55 (363)
Q Consensus 18 ~~~~~~~~C~~C~~~~~~~~---------~~~~~~~~c~~C~~gFve 55 (363)
.+....|-|..|.+.+.... -....-|.|+.|+..|..
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 34466899999998875432 222355899999999953
No 86
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=81.53 E-value=0.41 Score=34.43 Aligned_cols=41 Identities=15% Similarity=0.320 Sum_probs=29.3
Q ss_pred CCCCCCCceeeeecCCcceeeecc--------CCCceecccCCCCceee
Q 017955 16 ASDTDPTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVES 56 (363)
Q Consensus 16 ~~~~~~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~ 56 (363)
...+....|-|..|.+.|...... ...-+.|+.|+..|...
T Consensus 10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~ 58 (74)
T 2lce_A 10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP 58 (74)
T ss_dssp -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCH
T ss_pred cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCH
Confidence 344556789999999988764322 23459999999999653
No 87
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=81.04 E-value=0.58 Score=37.13 Aligned_cols=46 Identities=24% Similarity=0.307 Sum_probs=31.0
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhc---CCCCCCcCcC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS---RNTCPVCRFE 327 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~---~~sCPlCR~~ 327 (363)
...| ||......+..+..-.|..-||..|+..=+.. .-.||.|+..
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 3557 89876655544544459999999998653322 2279999754
No 88
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=80.38 E-value=0.35 Score=42.43 Aligned_cols=46 Identities=33% Similarity=0.592 Sum_probs=33.2
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCcCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRFELP 329 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~~l~ 329 (363)
+..|.||... ++.+..-.|...||..|+.+.|.... .||.|+..-.
T Consensus 4 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 4 EDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp CSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 4669999854 44444445999999999987765432 6999987543
No 89
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=80.30 E-value=0.63 Score=34.24 Aligned_cols=34 Identities=24% Similarity=0.575 Sum_probs=25.1
Q ss_pred CCceeeeecCCcceeeeccCCCceecccCCCCceeec
Q 017955 21 PTQYWCHHCEKRVSIETLANLPDVICHECKNGFVESI 57 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~~ 57 (363)
.-.|-|-.|...|.+. ....+.||+|+.-.+-..
T Consensus 19 ~v~Y~C~~Cg~~~~l~---~~~~iRC~~CG~RILyK~ 52 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQ---AKEVIRCRECGHRVMYKM 52 (63)
T ss_dssp CCCCBCSSSCCBCCCC---SSSCCCCSSSCCCCCBCC
T ss_pred CeEEECCCCCCeeecC---CCCceECCCCCcEEEEEe
Confidence 5679999999666544 246689999998766443
No 90
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=79.59 E-value=0.36 Score=34.97 Aligned_cols=46 Identities=33% Similarity=0.637 Sum_probs=32.0
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCcCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~~l 328 (363)
....|.||... ++.+..-.|...||..|+.+-|.... .||.|+...
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 8 HMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 45679999863 33444445899999999986554322 699997643
No 91
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=79.45 E-value=0.83 Score=32.04 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=29.8
Q ss_pred CCceeeeecCCcceeeecc-----CCCceecccCCCCceeeccCC
Q 017955 21 PTQYWCHHCEKRVSIETLA-----NLPDVICHECKNGFVESIPVT 60 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~-----~~~~~~c~~C~~gFve~~~~~ 60 (363)
...|-|..|.+.|...... ...-|.|+.|+..|...-+..
T Consensus 12 ~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~~ 56 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAM 56 (62)
T ss_dssp SSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTCS
T ss_pred CCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCcccc
Confidence 4579999999987654322 234599999999999876654
No 92
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=78.78 E-value=0.96 Score=38.82 Aligned_cols=33 Identities=30% Similarity=0.686 Sum_probs=23.2
Q ss_pred CCceeeeecCCcceeeeccCCCceecccCCCCceeecc
Q 017955 21 PTQYWCHHCEKRVSIETLANLPDVICHECKNGFVESIP 58 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~~~ 58 (363)
.-.|.|+.|.+.+.. ..+...||.|++- +..++
T Consensus 130 ~~~y~C~~Cg~~~~~----~~~~~~Cp~CG~~-~~~~~ 162 (165)
T 2lcq_A 130 KWRYVCIGCGRKFST----LPPGGVCPDCGSK-VKLIP 162 (165)
T ss_dssp CCCEEESSSCCEESS----CCGGGBCTTTCCB-EEECC
T ss_pred cEEEECCCCCCcccC----CCCCCcCCCCCCc-ceeCC
Confidence 347999999955543 2555789999997 55443
No 93
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=77.95 E-value=0.38 Score=36.00 Aligned_cols=49 Identities=18% Similarity=0.399 Sum_probs=32.5
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhc----CCCCCCcCcCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDS----RNTCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~----~~sCPlCR~~l 328 (363)
....|.||.........+..-.|..-||..|+..-+.. .-.||.|+..+
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 44569999877542223333358999999999765443 23699997654
No 94
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=77.51 E-value=0.73 Score=36.11 Aligned_cols=48 Identities=23% Similarity=0.657 Sum_probs=33.8
Q ss_pred cccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCcCCC
Q 017955 279 QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRFELP 329 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~~l~ 329 (363)
.....|.||... ++.+..-.|.-.||..|+.+=|.... .||.|+..-.
T Consensus 23 ~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~~ 74 (88)
T 1fp0_A 23 DSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 74 (88)
T ss_dssp SSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCCc
Confidence 356789999964 33444445889999999987665432 6999986543
No 95
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=76.97 E-value=0.46 Score=33.97 Aligned_cols=35 Identities=20% Similarity=0.496 Sum_probs=27.7
Q ss_pred CceeeeecCCcceeeeccC--------CCceecccCCCCceee
Q 017955 22 TQYWCHHCEKRVSIETLAN--------LPDVICHECKNGFVES 56 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~~~~~--------~~~~~c~~C~~gFve~ 56 (363)
.+|-|-.|.|.|.....+. .--|.|+.|+..|...
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~ 45 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQ 45 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSH
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCH
Confidence 4699999999988764433 4569999999999764
No 96
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=75.90 E-value=1.2 Score=43.55 Aligned_cols=58 Identities=16% Similarity=0.387 Sum_probs=38.7
Q ss_pred ccccccccccccccCCceEEeCCCCc--ccHhhHHHHHhcCC--CCCCcCcCCCCCChhHHHHH
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHV--YHGDCIVPWLDSRN--TCPVCRFELPTDDPEYEEER 339 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~--Fh~~CI~~WLk~~~--sCPlCR~~l~~~d~~~~~~~ 339 (363)
-.+.|||-+..|. ..++-..|.|+ |-..-+....++.. .||+|.+.+...+...+..-
T Consensus 248 vSL~CPlS~~ri~--~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~dL~ID~~~ 309 (371)
T 3i2d_A 248 MSLQCPISYTRMK--YPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFV 309 (371)
T ss_dssp EESBCTTTSSBCS--SEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGGEEEBHHH
T ss_pred EeecCCCcccccc--ccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHHHeeEcHHH
Confidence 3478998877766 35555669998 55444444443333 79999999988776554443
No 97
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=75.68 E-value=0.47 Score=42.50 Aligned_cols=47 Identities=32% Similarity=0.541 Sum_probs=32.8
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~~l~ 329 (363)
.+..|.||... ++.+..=.|...||..|+.+.|.... .||.|+..-.
T Consensus 6 ~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 45679999853 33333334899999999988765432 7999987543
No 98
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=74.39 E-value=1.5 Score=42.89 Aligned_cols=97 Identities=18% Similarity=0.349 Sum_probs=53.5
Q ss_pred cChhhHHHHHHHHHHhcCCCCCCChhhHHHHHc-C---Cc--eeeecccccccccccccccccCCceEEeCCCCc--ccH
Q 017955 237 MDAAGYEALLQNLAESDGGRRGAPRAAKSAVLE-L---PT--VEILSEQETIVCAICKDTVNVGETATKLPCGHV--YHG 308 (363)
Q Consensus 237 ~~~~~~e~Ll~~L~~~~~~~~~~~~~s~~~i~~-l---p~--~~~~~~~~~~~C~ICle~f~~~e~~~~LPC~H~--Fh~ 308 (363)
+-..+.+.|++.|.... ......++..|+. + +. +......-.+.|||-+..|. ..++-..|.|+ |-.
T Consensus 168 V~~~s~~~Llq~l~~k~---~~~~e~t~~~Ik~~l~~d~DddI~~~~~~vSL~CPlS~~ri~--~P~Rg~~C~HlqCFDl 242 (360)
T 4fo9_A 168 VRQLTSAMLLQRLKMKG---IRNPDHSRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLT--IPCRAVTCTHLQCFDA 242 (360)
T ss_dssp EEECCHHHHHHHHHTC----CBCHHHHHHHHHHHHC---------CCEEEESBCTTTCSBCS--SEEEETTCCCCCCEEH
T ss_pred EEeCCHHHHHHHHHhcC---CCCHHHHHHHHHHHhccCCccceeeeeeEEeeeCCCccceec--cCCcCCCCCCCccCCH
Confidence 35677888998886321 1111122233332 1 00 11111123467998877776 24555669998 655
Q ss_pred hhHHHHHhcCC--CCCCcCcCCCCCChhHHHH
Q 017955 309 DCIVPWLDSRN--TCPVCRFELPTDDPEYEEE 338 (363)
Q Consensus 309 ~CI~~WLk~~~--sCPlCR~~l~~~d~~~~~~ 338 (363)
.=+..+.++.. .||+|.+.+...+...+..
T Consensus 243 ~sfL~~~~~~~~W~CPiC~k~~~~~dL~ID~~ 274 (360)
T 4fo9_A 243 ALYLQMNEKKPTWICPVCDKKAAYESLILDGL 274 (360)
T ss_dssp HHHHHHHHHSCCCBCTTTCSBCCGGGEEEBHH
T ss_pred HHHHHHHhhCCCeECCCCCcccCHHHeEEcHH
Confidence 55555444433 7999999998777555444
No 99
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.28 E-value=1.7 Score=31.23 Aligned_cols=40 Identities=23% Similarity=0.508 Sum_probs=29.0
Q ss_pred CCCCCceeeeecCCcceeeecc--------CCCceecccCCCCceeec
Q 017955 18 DTDPTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVESI 57 (363)
Q Consensus 18 ~~~~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~~ 57 (363)
......|-|..|.+.+...... ...-|.|+.|+..|...-
T Consensus 13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 60 (77)
T 2cot_A 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60 (77)
T ss_dssp CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHH
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHH
Confidence 3356789999999988754322 234599999999997543
No 100
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=73.83 E-value=3.1 Score=31.57 Aligned_cols=49 Identities=12% Similarity=0.328 Sum_probs=32.5
Q ss_pred CCCCCCCCCCCCCCCCCCceeeeecCCcceeeeccCC------CceecccCCCCc
Q 017955 5 PSQAPTPTTPTASDTDPTQYWCHHCEKRVSIETLANL------PDVICHECKNGF 53 (363)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~------~~~~c~~C~~gF 53 (363)
++++++|++++..........|..|.+.|..++..-+ .=++|..|+.-+
T Consensus 7 ~~~~P~~~~~~~~~~~~~~~~C~~C~~~I~~~~~~a~~~~~H~~CF~C~~C~~~L 61 (89)
T 1x64_A 7 GVRAPVTKVHGGAGSAQRMPLCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNL 61 (89)
T ss_dssp CCCCCCCCCCCCCSCCCSCCBCTTTCCBCCSCCEESSSCEECTTTCCCSSSCCCT
T ss_pred cccCCCccCCCCCCCCCcCCCcccCCCEecccEEEECCceECccCCEecCCCCCC
Confidence 4456666666655566777899999988876533221 226788887655
No 101
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.55 E-value=0.23 Score=35.24 Aligned_cols=44 Identities=32% Similarity=0.748 Sum_probs=30.1
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
.+..|.||... +..+..-.|...||..|+.+-|.... .||.|+.
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 45679999874 33444445999999999986554322 5877753
No 102
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=73.37 E-value=1.4 Score=31.41 Aligned_cols=37 Identities=24% Similarity=0.524 Sum_probs=27.5
Q ss_pred CCCceeeeecCCcceeeec--------cCCCceecccCCCCceee
Q 017955 20 DPTQYWCHHCEKRVSIETL--------ANLPDVICHECKNGFVES 56 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~--------~~~~~~~c~~C~~gFve~ 56 (363)
....|-|..|.+.|..... ....-|.|+.|+..|...
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~ 55 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 55 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSH
T ss_pred CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCH
Confidence 4568999999988765432 224569999999999754
No 103
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.57 E-value=1.1 Score=31.59 Aligned_cols=37 Identities=14% Similarity=0.207 Sum_probs=27.1
Q ss_pred CCCceeeeecCCcceeeecc--------CCCceecccCCCCceee
Q 017955 20 DPTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVES 56 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~ 56 (363)
....|-|..|.+.|...... ...-|.|+.|+..|...
T Consensus 6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~ 50 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQP 50 (70)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSH
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCH
Confidence 35689999999887654222 23459999999999753
No 104
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=72.42 E-value=1.3 Score=29.00 Aligned_cols=36 Identities=14% Similarity=0.030 Sum_probs=24.9
Q ss_pred CCCCCCCceeeeecCCcceeeecc--------CCCceecccCCC
Q 017955 16 ASDTDPTQYWCHHCEKRVSIETLA--------NLPDVICHECKN 51 (363)
Q Consensus 16 ~~~~~~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~ 51 (363)
++......|.|..|.+.|.....+ ...-|.|+.|++
T Consensus 5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k 48 (48)
T 2epr_A 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48 (48)
T ss_dssp SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence 444567789999999887654322 234589999975
No 105
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=72.32 E-value=0.74 Score=33.28 Aligned_cols=49 Identities=20% Similarity=0.450 Sum_probs=32.9
Q ss_pred cccccccccccccccCC-ceEEeCCCCcccHhhHHHHHh-----cCCCCCCcCcC
Q 017955 279 QETIVCAICKDTVNVGE-TATKLPCGHVYHGDCIVPWLD-----SRNTCPVCRFE 327 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e-~~~~LPC~H~Fh~~CI~~WLk-----~~~sCPlCR~~ 327 (363)
.+...|+||...+..+. -+..-.|..=||..|+.--.. ..-.||.|+..
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 35567999998875433 333335899999999864322 23379999653
No 106
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=71.80 E-value=0.97 Score=36.27 Aligned_cols=37 Identities=24% Similarity=0.522 Sum_probs=26.4
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHh
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD 316 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk 316 (363)
.+..|.||...-...+.+..-.|...||..||..++.
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~ 42 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVT 42 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCC
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccc
Confidence 4577999987633222345556999999999988764
No 107
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=70.74 E-value=3.3 Score=33.32 Aligned_cols=32 Identities=25% Similarity=0.543 Sum_probs=22.1
Q ss_pred ccccccccccc------ccCCceEEeCCCCcccHhhHH
Q 017955 281 TIVCAICKDTV------NVGETATKLPCGHVYHGDCIV 312 (363)
Q Consensus 281 ~~~C~ICle~f------~~~e~~~~LPC~H~Fh~~CI~ 312 (363)
...|.||+..- ..++.+....|+..||..||.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~ 42 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLK 42 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHT
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhc
Confidence 35699998752 122344455699999999995
No 108
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=70.33 E-value=0.35 Score=35.56 Aligned_cols=44 Identities=30% Similarity=0.607 Sum_probs=30.8
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
.+..|.||... ++.+..-.|...||..|+.+-|.... .||.|..
T Consensus 7 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 7 NEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp CCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 45779999864 33444445999999999986554322 5998854
No 109
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=70.13 E-value=0.84 Score=30.67 Aligned_cols=34 Identities=21% Similarity=0.571 Sum_probs=24.5
Q ss_pred ceeeeecCCcceeeec--------cCCCceecccCCCCceee
Q 017955 23 QYWCHHCEKRVSIETL--------ANLPDVICHECKNGFVES 56 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~--------~~~~~~~c~~C~~gFve~ 56 (363)
.|.|..|.+.+..... ....-+.|+.|+..|...
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 42 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTK 42 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSH
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCH
Confidence 3789999988765432 224559999999999653
No 110
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=68.87 E-value=2.9 Score=32.20 Aligned_cols=37 Identities=16% Similarity=0.406 Sum_probs=28.5
Q ss_pred ccccccccccccccCCceEEeC--CCCcccHhhHHHHHhc
Q 017955 280 ETIVCAICKDTVNVGETATKLP--CGHVYHGDCIVPWLDS 317 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LP--C~H~Fh~~CI~~WLk~ 317 (363)
..+.|.+|.+.+...+ .+..| =.|.||..|-+..+|.
T Consensus 14 a~l~CtlC~erLEdtH-FVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 14 GPLCCTICHERLEDTH-FVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp CSCCCSSSCSCCSSTT-SEECSSCSSCEECHHHHHHHHHH
T ss_pred CeeEeecchhhhccCc-eeeCCCccCCeeeccccHHHHHh
Confidence 3467999999987543 34444 4799999999999875
No 111
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=68.61 E-value=1 Score=39.91 Aligned_cols=43 Identities=26% Similarity=0.743 Sum_probs=31.0
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCcC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRFE 327 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~~ 327 (363)
..|.||... ++.+..-.|...||..|+.+=|.... .||.|+..
T Consensus 3 ~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 3 TICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 569999854 44555556889999999976554322 69999865
No 112
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=68.37 E-value=1.5 Score=32.64 Aligned_cols=37 Identities=19% Similarity=0.333 Sum_probs=23.7
Q ss_pred CCCceeeeecCCcceeeecc--------CCCceecccCCCCceee
Q 017955 20 DPTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVES 56 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~ 56 (363)
....|.|..|.+.+...... ....+.|+.|+..|...
T Consensus 5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 49 (96)
T 2dmd_A 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADS 49 (96)
T ss_dssp CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSH
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCH
Confidence 35568888888777644321 23457888888877544
No 113
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=67.82 E-value=0.42 Score=34.82 Aligned_cols=50 Identities=32% Similarity=0.657 Sum_probs=32.8
Q ss_pred cccccccccccccc--CCceEEeCCCCcccHhhHHHHHhc-------CCCCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNV--GETATKLPCGHVYHGDCIVPWLDS-------RNTCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~--~e~~~~LPC~H~Fh~~CI~~WLk~-------~~sCPlCR~~l~ 329 (363)
....|.||...... +..+..-.|...||..|+.+-|.. .=.||.|+....
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 45779999976432 333333459999999999864321 226998876544
No 114
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.72 E-value=2.8 Score=31.15 Aligned_cols=38 Identities=13% Similarity=0.414 Sum_probs=24.1
Q ss_pred CCCCCCCCCCceeeeecCCcceeeeccCCCceecccCCCCce
Q 017955 13 TPTASDTDPTQYWCHHCEKRVSIETLANLPDVICHECKNGFV 54 (363)
Q Consensus 13 ~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFv 54 (363)
+|++.........|..|.|.|-+.- ..-+.| +|++-|-
T Consensus 5 sp~~~~~~~~~~rC~~C~kk~gL~~---~egf~C-rCg~~FC 42 (67)
T 1x4w_A 5 SSGSRSKQKSRRRCFQCQTKLELVQ---QELGSC-RCGYVFC 42 (67)
T ss_dssp CCSCCCSCSCTTBCSSSCCBCCHHH---HHHHCC-SSSCCCC
T ss_pred CCCCccCCccCCcchhhCCeecccc---cCceEe-cCCCEeh
Confidence 3444445566778999996654220 002679 9999985
No 115
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=67.06 E-value=1.8 Score=38.23 Aligned_cols=49 Identities=20% Similarity=0.386 Sum_probs=34.2
Q ss_pred ccccccccccccCCc----eEEeCCCCcccHhhHHHH------Hh-----cCCCCCCcCcCCCC
Q 017955 282 IVCAICKDTVNVGET----ATKLPCGHVYHGDCIVPW------LD-----SRNTCPVCRFELPT 330 (363)
Q Consensus 282 ~~C~ICle~f~~~e~----~~~LPC~H~Fh~~CI~~W------Lk-----~~~sCPlCR~~l~~ 330 (363)
..|+||...|..++. +..--|..-||..|+.-- ++ ..-.||.|+..-+.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 469999999886652 333349999999998431 11 14589999876543
No 116
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=66.41 E-value=1.2 Score=30.24 Aligned_cols=34 Identities=18% Similarity=0.462 Sum_probs=24.9
Q ss_pred ceeeeecCCcceeeecc--------CCCceecccCCCCceee
Q 017955 23 QYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVES 56 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~ 56 (363)
.|-|..|.+.+...... ...-+.|+.|+..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 43 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR 43 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSH
T ss_pred cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence 58899999888754322 23459999999999653
No 117
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=66.32 E-value=2.9 Score=31.73 Aligned_cols=39 Identities=13% Similarity=0.383 Sum_probs=28.5
Q ss_pred CCCCceeeeecCCcceeeecc--------CCCceecccCCCCceeec
Q 017955 19 TDPTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVESI 57 (363)
Q Consensus 19 ~~~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~~ 57 (363)
.....|.|..|.+.|...... ...-+.|+.|+..|....
T Consensus 13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 59 (106)
T 2ee8_A 13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD 59 (106)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHH
T ss_pred CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHH
Confidence 456679999999888654322 235699999999997654
No 118
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=66.08 E-value=1.6 Score=35.14 Aligned_cols=44 Identities=27% Similarity=0.588 Sum_probs=28.6
Q ss_pred ccccccccc-ccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 283 VCAICKDTV-NVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 283 ~C~ICle~f-~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
.|.||...- ..+..+..-.|...||..|+.+-|.... .||.||.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 577887642 2222333334999999999977655422 7999975
No 119
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=65.96 E-value=2.6 Score=31.50 Aligned_cols=31 Identities=26% Similarity=0.712 Sum_probs=21.3
Q ss_pred CCCCCceeeeecCCcceeeeccCCCceecccCCC
Q 017955 18 DTDPTQYWCHHCEKRVSIETLANLPDVICHECKN 51 (363)
Q Consensus 18 ~~~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~ 51 (363)
.+..-.|-|-.|...|.+. ....+.||+|+.
T Consensus 23 ~~~~v~Y~C~~CG~~~e~~---~~d~irCp~CG~ 53 (70)
T 1twf_L 23 RTATLKYICAECSSKLSLS---RTDAVRCKDCGH 53 (70)
T ss_dssp --CCCCEECSSSCCEECCC---TTSTTCCSSSCC
T ss_pred CCceEEEECCCCCCcceeC---CCCCccCCCCCc
Confidence 4467899999999554443 223467999998
No 120
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=65.91 E-value=2.5 Score=34.08 Aligned_cols=31 Identities=19% Similarity=0.393 Sum_probs=22.5
Q ss_pred ceeeeecCCcceeeeccCCCceecccCCCCceee
Q 017955 23 QYWCHHCEKRVSIETLANLPDVICHECKNGFVES 56 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~ 56 (363)
.|-|-.|...|. ...-.-..||.|++.+|++
T Consensus 67 p~~C~~CG~~F~---~~~~kPsrCP~CkSe~Ie~ 97 (105)
T 2gmg_A 67 PAQCRKCGFVFK---AEINIPSRCPKCKSEWIEE 97 (105)
T ss_dssp CCBBTTTCCBCC---CCSSCCSSCSSSCCCCBCC
T ss_pred CcChhhCcCeec---ccCCCCCCCcCCCCCccCC
Confidence 588999997761 2222336799999999985
No 121
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=64.41 E-value=1.3 Score=29.70 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=24.1
Q ss_pred CceeeeecCCcceeeecc--------CCCceecccCCCCcee
Q 017955 22 TQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVE 55 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve 55 (363)
..|-|..|.+.+...... ...-+.|+.|+..|..
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 44 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQ 44 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESS
T ss_pred CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCC
Confidence 468999999888655332 2345999999999864
No 122
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=63.67 E-value=1 Score=34.29 Aligned_cols=44 Identities=27% Similarity=0.551 Sum_probs=25.8
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcC-----CCCCCcCc
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR-----NTCPVCRF 326 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~-----~sCPlCR~ 326 (363)
.|.||...-..+..+..-.|...||..|+.+-|... =.||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 355555442222222222488999999998765442 26998875
No 123
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=63.12 E-value=5.8 Score=29.95 Aligned_cols=32 Identities=25% Similarity=0.633 Sum_probs=22.5
Q ss_pred CCCCCCceeeeecCCcceeeeccCCCceecccCCCCcee
Q 017955 17 SDTDPTQYWCHHCEKRVSIETLANLPDVICHECKNGFVE 55 (363)
Q Consensus 17 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve 55 (363)
.......-.|+.|.|.|-+ .-+.| +|++-|--
T Consensus 19 ~~~k~~~~RC~~C~kkvgL------~~f~C-rCg~~FCs 50 (74)
T 1wfp_A 19 DPPKSTATRCLSCNKKVGV------TGFKC-RCGSTFCG 50 (74)
T ss_dssp CCTTCCCCBCSSSCCBCTT------TCEEC-TTSCEECT
T ss_pred ccCcccCccchhhcCcccc------cceEe-ccCCEecc
Confidence 3345566789999965433 25899 99999853
No 124
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=62.43 E-value=4.3 Score=30.84 Aligned_cols=37 Identities=19% Similarity=0.583 Sum_probs=25.7
Q ss_pred cccccccccccccccccCCce-EEeCCCCcccHhhHHH
Q 017955 277 SEQETIVCAICKDTVNVGETA-TKLPCGHVYHGDCIVP 313 (363)
Q Consensus 277 ~~~~~~~C~ICle~f~~~e~~-~~LPC~H~Fh~~CI~~ 313 (363)
.+.....|.+|...|..-..- -.-.||++||..|...
T Consensus 15 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 15 KDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred cCccCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 344556899999998743222 2234999999999764
No 125
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=61.72 E-value=0.91 Score=32.51 Aligned_cols=44 Identities=32% Similarity=0.748 Sum_probs=30.2
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
.+..|.||... +..+..-.|...||..|+.+-|.... .||.|+.
T Consensus 4 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 4 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 35679999874 33444445999999999986554322 5888854
No 126
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=61.68 E-value=9.7 Score=29.82 Aligned_cols=51 Identities=20% Similarity=0.434 Sum_probs=36.2
Q ss_pred ccccccccccccccCC---c-eEEeCCCCcccHhhHHHHHhc-CCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGE---T-ATKLPCGHVYHGDCIVPWLDS-RNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e---~-~~~LPC~H~Fh~~CI~~WLk~-~~sCPlCR~~l~~ 330 (363)
....|.||-+.+.... . +..--|+--.|+.|+.-=.+. ++.||.|+..+..
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcccc
Confidence 3467999999865322 2 233348888999998765554 6689999988763
No 127
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=61.63 E-value=2.2 Score=30.92 Aligned_cols=42 Identities=29% Similarity=0.532 Sum_probs=28.3
Q ss_pred ccccccccccccCCceEEeC-CCCcccHhhHHHHHhcCCCCCCc
Q 017955 282 IVCAICKDTVNVGETATKLP-CGHVYHGDCIVPWLDSRNTCPVC 324 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LP-C~H~Fh~~CI~~WLk~~~sCPlC 324 (363)
..|--|+..|... ....-+ |++.||.+|=.---..-..||-|
T Consensus 16 ~~C~~C~~~~~~~-~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQ-HVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTS-EEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCC-ccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 4599999988532 123344 99999999954333444589988
No 128
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=61.59 E-value=6.9 Score=33.15 Aligned_cols=44 Identities=20% Similarity=0.436 Sum_probs=31.5
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHh---------c--CCCCCCcCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD---------S--RNTCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk---------~--~~sCPlCR~ 326 (363)
.+..|.||.+- |+.+..-.|...||..||.+=|. . .=.||+|+.
T Consensus 62 ~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 56779999974 33444446999999999997552 1 127999974
No 129
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.03 E-value=0.5 Score=37.16 Aligned_cols=47 Identities=23% Similarity=0.542 Sum_probs=30.7
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
....|.||...-.....+..-.|...||..|+.+=|.... .||.|+.
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 4567999987643222333335999999999975443322 5999954
No 130
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=59.93 E-value=0.9 Score=35.36 Aligned_cols=54 Identities=22% Similarity=0.263 Sum_probs=33.0
Q ss_pred cccccccccccc--ccCCceEEeCCCCcccHhhHHHHHhcC--CCCCCcCcCCCCCCh
Q 017955 280 ETIVCAICKDTV--NVGETATKLPCGHVYHGDCIVPWLDSR--NTCPVCRFELPTDDP 333 (363)
Q Consensus 280 ~~~~C~ICle~f--~~~e~~~~LPC~H~Fh~~CI~~WLk~~--~sCPlCR~~l~~~d~ 333 (363)
.+..|.||...- ..+..+..-.|.-.||..|+..-+... =.||.|.........
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~~~~ 81 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPAL 81 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTSCC-
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccchhhh
Confidence 457899998753 111223333488899999997643221 269999766554443
No 131
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=59.62 E-value=4.6 Score=28.36 Aligned_cols=43 Identities=21% Similarity=0.397 Sum_probs=30.0
Q ss_pred CCCCCCCCCceeeee--cCCcceeeec--------cCCCceeccc--CCCCceee
Q 017955 14 PTASDTDPTQYWCHH--CEKRVSIETL--------ANLPDVICHE--CKNGFVES 56 (363)
Q Consensus 14 ~~~~~~~~~~~~C~~--C~~~~~~~~~--------~~~~~~~c~~--C~~gFve~ 56 (363)
+....+....|.|.. |.+.|..... ....-|.|+. |+..|...
T Consensus 8 ~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~ 62 (72)
T 2epa_A 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62 (72)
T ss_dssp CCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSH
T ss_pred CCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCH
Confidence 344556678999999 9988765422 2245599965 99999643
No 132
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.30 E-value=1.8 Score=32.89 Aligned_cols=44 Identities=27% Similarity=0.545 Sum_probs=28.2
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcC-----CCCCCcCc
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR-----NTCPVCRF 326 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~-----~sCPlCR~ 326 (363)
.|.||...-..+..+..-.|...||..|+.+=|... =.||.|+.
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 678888643333334333599999999998544331 15888864
No 133
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=58.98 E-value=1.8 Score=32.09 Aligned_cols=44 Identities=27% Similarity=0.551 Sum_probs=26.3
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcC-----CCCCCcCc
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR-----NTCPVCRF 326 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~-----~sCPlCR~ 326 (363)
.|.||...-..+..+..-.|...||..||.+=|... =.||.|+.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 455776532222223222488999999998644431 26998875
No 134
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=58.41 E-value=9 Score=29.70 Aligned_cols=30 Identities=23% Similarity=0.625 Sum_probs=21.1
Q ss_pred CCCceeeeecCCcceeeeccCCCceecccCCCCcee
Q 017955 20 DPTQYWCHHCEKRVSIETLANLPDVICHECKNGFVE 55 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve 55 (363)
....-.|+.|.+.|-+- .-+.| +|+.-|=-
T Consensus 22 k~~~~rC~~C~kkvgl~-----~~f~C-rCg~~FC~ 51 (85)
T 1wff_A 22 KKIMKHCFLCGKKTGLA-----TSFEC-RCGNNFCA 51 (85)
T ss_dssp CCCCCBCSSSCCBCSSS-----SCEEC-TTCCEECT
T ss_pred cccCccchhhCCeeccc-----CCeEc-CCCCEecc
Confidence 34457899999665542 24889 59998853
No 135
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=57.76 E-value=4.6 Score=31.00 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=28.3
Q ss_pred CCCCCCceeeeecCC-----cceeeeccCCCceecccCCCCceeec
Q 017955 17 SDTDPTQYWCHHCEK-----RVSIETLANLPDVICHECKNGFVESI 57 (363)
Q Consensus 17 ~~~~~~~~~C~~C~~-----~~~~~~~~~~~~~~c~~C~~gFve~~ 57 (363)
-..+.++.+|.-=.. +|++.++.+--.++||||+--|+-+-
T Consensus 22 I~V~~~~V~CdGg~g~LGHPrVyL~ld~~~g~~~CpYCg~~f~l~~ 67 (80)
T 2jvm_A 22 VVVSTWKVACDGGEGALGHPRVWLSIPHETGFVECGYCDRRYIHES 67 (80)
T ss_dssp EEESCSEEEECCCSTTCCCCCEEEECCTTTCEEECSSSSCEEEEHH
T ss_pred EEECCcEEEcCCCCCCCCCCEEEEEccCCCCeEECCCCCCEEEecC
Confidence 345678888855332 45666644456799999999998764
No 136
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.47 E-value=4.4 Score=31.79 Aligned_cols=45 Identities=29% Similarity=0.617 Sum_probs=28.6
Q ss_pred ccccccccccccccCCceEEeC--CC-CcccHhhHHHHHhc----CCCCCCcCcCC
Q 017955 280 ETIVCAICKDTVNVGETATKLP--CG-HVYHGDCIVPWLDS----RNTCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LP--C~-H~Fh~~CI~~WLk~----~~sCPlCR~~l 328 (363)
....| ||..... +..+..=. |. .-||..||. |.. +-.||.|+...
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 34557 9988653 33333334 55 579999996 433 22799997654
No 137
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=57.42 E-value=7.3 Score=26.51 Aligned_cols=36 Identities=22% Similarity=0.423 Sum_probs=26.3
Q ss_pred CceeeeecCCcceeeeccCCCceecccCCCCceeecc
Q 017955 22 TQYWCHHCEKRVSIETLANLPDVICHECKNGFVESIP 58 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~~~ 58 (363)
..+.|..|... .+..++...++||+.|+--|-+.+-
T Consensus 4 ~~~~CP~C~~~-~l~~d~~~gelvC~~CG~v~~e~~i 39 (50)
T 1pft_A 4 KQKVCPACESA-ELIYDPERGEIVCAKCGYVIEENII 39 (50)
T ss_dssp SCCSCTTTSCC-CEEEETTTTEEEESSSCCBCCCCCC
T ss_pred ccEeCcCCCCc-ceEEcCCCCeEECcccCCccccccc
Confidence 36779999741 3556777789999999887765553
No 138
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.88 E-value=2.7 Score=30.15 Aligned_cols=36 Identities=17% Similarity=0.427 Sum_probs=26.3
Q ss_pred CCceeeeecCCcceeeecc---------C-CCceecccCCCCceee
Q 017955 21 PTQYWCHHCEKRVSIETLA---------N-LPDVICHECKNGFVES 56 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~---------~-~~~~~c~~C~~gFve~ 56 (363)
...|-|..|.+.|...... . ..-|.|+.|+..|...
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~ 58 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 58 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSH
T ss_pred CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCH
Confidence 4579999999888753221 1 2469999999999754
No 139
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=56.19 E-value=4.9 Score=29.88 Aligned_cols=45 Identities=29% Similarity=0.617 Sum_probs=28.3
Q ss_pred ccccccccccccccCCceEEeC--CC-CcccHhhHHHHHhcC----CCCCCcCcCC
Q 017955 280 ETIVCAICKDTVNVGETATKLP--CG-HVYHGDCIVPWLDSR----NTCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LP--C~-H~Fh~~CI~~WLk~~----~sCPlCR~~l 328 (363)
....| ||..... +.-+..=. |. .-||..||. |... -.||.|+...
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 34557 8987643 33333334 55 589999997 4432 2799997654
No 140
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=53.86 E-value=4.9 Score=32.11 Aligned_cols=12 Identities=17% Similarity=0.875 Sum_probs=10.9
Q ss_pred ccHhhHHHHHhc
Q 017955 306 YHGDCIVPWLDS 317 (363)
Q Consensus 306 Fh~~CI~~WLk~ 317 (363)
||+.||.+|++.
T Consensus 43 FCRNCLskWy~~ 54 (105)
T 2o35_A 43 FCRNCLSNWYRE 54 (105)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 141
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=53.73 E-value=4.9 Score=32.04 Aligned_cols=12 Identities=25% Similarity=0.949 Sum_probs=10.9
Q ss_pred ccHhhHHHHHhc
Q 017955 306 YHGDCIVPWLDS 317 (363)
Q Consensus 306 Fh~~CI~~WLk~ 317 (363)
||+.||.+|++.
T Consensus 42 FCRNCLskWy~~ 53 (104)
T 3fyb_A 42 FCRNCLAKWLME 53 (104)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 142
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.02 E-value=4.5 Score=29.82 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=21.6
Q ss_pred CCceeeeecCCcceeeecc--------CCCceecccCCCCcee
Q 017955 21 PTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVE 55 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve 55 (363)
...|.|..|.+.+...... ...-+.|+.|+..|..
T Consensus 5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 47 (95)
T 2yt9_A 5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKR 47 (95)
T ss_dssp CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESC
T ss_pred CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCC
Confidence 4467888887766543221 2344778888777754
No 143
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=51.72 E-value=14 Score=28.29 Aligned_cols=28 Identities=25% Similarity=0.660 Sum_probs=20.2
Q ss_pred CCceeeeecCCcceeeecc----------------CCC-ceecccCCCC
Q 017955 21 PTQYWCHHCEKRVSIETLA----------------NLP-DVICHECKNG 52 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~----------------~~~-~~~c~~C~~g 52 (363)
..+|-|-.|. -.-++ .|| +.+||.|+-+
T Consensus 25 m~~y~C~vCG----yvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 25 YKLFRCIQCG----FEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp CCEEEETTTC----CEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred cceEEeCCCC----EEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 5689999999 33332 365 5799999864
No 144
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.56 E-value=6.3 Score=27.34 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=26.7
Q ss_pred CCCceeeeecCCcceeeec-------cCCCceecc-cCCCCceee
Q 017955 20 DPTQYWCHHCEKRVSIETL-------ANLPDVICH-ECKNGFVES 56 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~-------~~~~~~~c~-~C~~gFve~ 56 (363)
....|-|..|.+.|. ... ....-|.|+ .|+..|+..
T Consensus 7 ~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~ 50 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAR 50 (66)
T ss_dssp CCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEET
T ss_pred CCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccH
Confidence 356799999999886 322 223458999 999999865
No 145
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=50.42 E-value=9.7 Score=31.30 Aligned_cols=35 Identities=20% Similarity=0.512 Sum_probs=24.7
Q ss_pred cccccccccccccccCCce-EEeCCCCcccHhhHHH
Q 017955 279 QETIVCAICKDTVNVGETA-TKLPCGHVYHGDCIVP 313 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~-~~LPC~H~Fh~~CI~~ 313 (363)
.....|.+|...|..-..- -.-.||++||..|...
T Consensus 67 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 67 NEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 3456799999998743222 2234999999999654
No 146
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=50.21 E-value=12 Score=28.08 Aligned_cols=48 Identities=23% Similarity=0.505 Sum_probs=30.9
Q ss_pred cccccccccccccc-CCceEEeCCCCcccHhhHHHHHh-----cCCCCCCcCcCC
Q 017955 280 ETIVCAICKDTVNV-GETATKLPCGHVYHGDCIVPWLD-----SRNTCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~-~e~~~~LPC~H~Fh~~CI~~WLk-----~~~sCPlCR~~l 328 (363)
....| ||...+.. +.-+..-.|..=||..|+.--.. ..-.||.|+...
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 34456 99887753 22344445999999999853221 234799998754
No 147
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=50.12 E-value=5.1 Score=29.73 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=27.3
Q ss_pred CCCCCceeeeecCC-----cceeeeccCCCceecccCCCCceeecc
Q 017955 18 DTDPTQYWCHHCEK-----RVSIETLANLPDVICHECKNGFVESIP 58 (363)
Q Consensus 18 ~~~~~~~~C~~C~~-----~~~~~~~~~~~~~~c~~C~~gFve~~~ 58 (363)
.++.++.+|.-=.. +|++.++.+--.++||||+--|+.+-.
T Consensus 10 ~v~~r~v~CdGg~g~lgHPrVyl~ld~~~g~~~CpYCg~~f~l~~~ 55 (67)
T 2jrr_A 10 IVDKSRVACDGGEGALGHPRVWLQIPEDTGWVECPYCDCKYVLKGS 55 (67)
T ss_dssp EESSSEEEEEESSTTSEEEEEEEECCTTTSEEEETTTTEEEEETTS
T ss_pred EECCCEEEeCCCCCCCCCCEEEEEccCCCCeEECCCCCCEEEECCC
Confidence 34667788855332 355555444456999999999997643
No 148
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=50.03 E-value=14 Score=27.91 Aligned_cols=29 Identities=31% Similarity=0.754 Sum_probs=20.5
Q ss_pred CCCceeeeecCCcceeeeccCCCceecccCCCCcee
Q 017955 20 DPTQYWCHHCEKRVSIETLANLPDVICHECKNGFVE 55 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve 55 (363)
....-.|+.|.|.|-+- -+.|. |++-|--
T Consensus 22 k~~~nRC~~CrKkvgL~------gf~Cr-Cg~~FCs 50 (74)
T 1wfl_A 22 KPKKNRCFMCRKKVGLT------GFDCR-CGNLFCG 50 (74)
T ss_dssp CSCTTBCSSSCCBCGGG------CEECT-TSCEECS
T ss_pred CCcCCcChhhCCccccc------CeecC-CCCEech
Confidence 33456899999665532 38899 9988853
No 149
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=49.79 E-value=2.8 Score=38.31 Aligned_cols=44 Identities=27% Similarity=0.551 Sum_probs=25.5
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcC-----CCCCCcCc
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSR-----NTCPVCRF 326 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~-----~sCPlCR~ 326 (363)
.|.||...-..+..+..-.|...||..|+.+=|... =.||.|+.
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 578887642223334444599999999998654431 15999965
No 150
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=49.49 E-value=5.4 Score=21.89 Aligned_cols=12 Identities=25% Similarity=0.692 Sum_probs=9.7
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 679999998853
No 151
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=49.49 E-value=5.1 Score=30.74 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=24.6
Q ss_pred CceeeeecCCcc-eeeecc-------CCCceecccCCCCcee
Q 017955 22 TQYWCHHCEKRV-SIETLA-------NLPDVICHECKNGFVE 55 (363)
Q Consensus 22 ~~~~C~~C~~~~-~~~~~~-------~~~~~~c~~C~~gFve 55 (363)
..|-|..|.+.| ...... .-.-|.|+.|++.|..
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~ 74 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRS 74 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSS
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCC
Confidence 468999999999 443211 2345899999999864
No 152
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=49.44 E-value=3 Score=28.72 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=25.9
Q ss_pred CCceeeeecCCcceeee---------c-cCCCceecccCCCCcee
Q 017955 21 PTQYWCHHCEKRVSIET---------L-ANLPDVICHECKNGFVE 55 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~---------~-~~~~~~~c~~C~~gFve 55 (363)
...|-|..|.+.+.... - ....-+.|+.|+..|..
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~ 52 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTR 52 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESC
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCC
Confidence 35799999998886531 1 23456999999999964
No 153
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=49.00 E-value=12 Score=27.21 Aligned_cols=33 Identities=24% Similarity=0.485 Sum_probs=23.5
Q ss_pred ccccccccccccccCCc-eEEe-CCCCcccHhhHH
Q 017955 280 ETIVCAICKDTVNVGET-ATKL-PCGHVYHGDCIV 312 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~-~~~L-PC~H~Fh~~CI~ 312 (363)
....|+||...+..... +..- .|.--||..|+-
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 45679999998875443 3333 699999999974
No 154
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=48.58 E-value=6.7 Score=27.06 Aligned_cols=43 Identities=14% Similarity=0.246 Sum_probs=28.1
Q ss_pred cccccccccccCCce-EEe-CCCCcccHhhHHHHH----hcCCCCCCcC
Q 017955 283 VCAICKDTVNVGETA-TKL-PCGHVYHGDCIVPWL----DSRNTCPVCR 325 (363)
Q Consensus 283 ~C~ICle~f~~~e~~-~~L-PC~H~Fh~~CI~~WL----k~~~sCPlCR 325 (363)
.|.||...+..+... ..- .|..=||..|+.--. ..+-.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 488998887644433 333 488899999975322 2455899885
No 155
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=48.58 E-value=13 Score=27.21 Aligned_cols=28 Identities=25% Similarity=0.676 Sum_probs=20.3
Q ss_pred CCceeeeecCCcceeeeccCCCceecccCCCCcee
Q 017955 21 PTQYWCHHCEKRVSIETLANLPDVICHECKNGFVE 55 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve 55 (363)
...-.|..|.+.|. |.-+.| +|++-|--
T Consensus 13 ~~~~rC~~C~kkvg------l~~f~C-rCg~~FC~ 40 (64)
T 1wg2_A 13 RPNNRCFSCNKKVG------VMGFKC-KCGSTFCG 40 (64)
T ss_dssp CCSCSCTTTCCCCT------TSCEEC-TTSCEECS
T ss_pred CcCCcChhhCCccc------ccCeEe-ecCCEecc
Confidence 34568999996543 235899 99999854
No 156
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.39 E-value=4.6 Score=28.85 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=26.4
Q ss_pred CCceeeeecCCcceeeecc-----------CCCceecccCCCCceee
Q 017955 21 PTQYWCHHCEKRVSIETLA-----------NLPDVICHECKNGFVES 56 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~-----------~~~~~~c~~C~~gFve~ 56 (363)
...|-|..|.+.|...... ...-|.|+.|+..|...
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~ 51 (78)
T 2d9h_A 5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKP 51 (78)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSH
T ss_pred CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCH
Confidence 4579999999888654221 13459999999999643
No 157
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=48.14 E-value=13 Score=28.27 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=25.8
Q ss_pred ccccccccccccccccCCceE-EeCCCCcccHhhHHHH
Q 017955 278 EQETIVCAICKDTVNVGETAT-KLPCGHVYHGDCIVPW 314 (363)
Q Consensus 278 ~~~~~~C~ICle~f~~~e~~~-~LPC~H~Fh~~CI~~W 314 (363)
+.....|.+|...|..-..-. .-.||++||..|....
T Consensus 18 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 18 DEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp TTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred CCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 335678999999987432222 2349999999997654
No 158
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=47.78 E-value=12 Score=28.96 Aligned_cols=36 Identities=22% Similarity=0.411 Sum_probs=25.7
Q ss_pred ccccccccccccccCCc-eEEeCCCCcccHhhHHHHH
Q 017955 280 ETIVCAICKDTVNVGET-ATKLPCGHVYHGDCIVPWL 315 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~-~~~LPC~H~Fh~~CI~~WL 315 (363)
....|.+|...|..-.. -..-.||++||..|...++
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~ 55 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKC 55 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCCee
Confidence 45679999998874332 2233499999999987653
No 159
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=47.41 E-value=3.9 Score=30.08 Aligned_cols=34 Identities=21% Similarity=0.449 Sum_probs=24.8
Q ss_pred ceeeeecCCcceeeecc--------CCCceecccCCCCceee
Q 017955 23 QYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVES 56 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~ 56 (363)
.|-|..|.+.+...... ...-|.|+.|+..|...
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~ 44 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARS 44 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSH
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCH
Confidence 68999999887654332 23459999999998643
No 160
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=47.29 E-value=5.8 Score=21.83 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=10.0
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 4 ~~C~~C~k~f~~ 15 (27)
T 2kvh_A 4 FSCSLCPQRSRD 15 (27)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCCcChhhCC
Confidence 789999998864
No 161
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=46.74 E-value=7.9 Score=29.80 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=22.7
Q ss_pred CCceeeeecCCcceeeeccCCCceecccCCCCce
Q 017955 21 PTQYWCHHCEKRVSIETLANLPDVICHECKNGFV 54 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFv 54 (363)
..+|.|..|.+...-. +...-..|++|+.-|.
T Consensus 25 ~~~y~Cp~CG~~~v~r--~atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 25 NEDHACPNCGEDRVDR--QGTGIWQCSYCDYKFT 56 (83)
T ss_dssp HSCEECSSSCCEEEEE--EETTEEEETTTCCEEE
T ss_pred cccCcCCCCCCcceec--cCCCeEECCCCCCEec
Confidence 3589999999743332 2344588999999775
No 162
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.71 E-value=1.9 Score=32.89 Aligned_cols=36 Identities=14% Similarity=0.350 Sum_probs=25.8
Q ss_pred CCCceeeeecCCcce-eeecc--------C-CCceecccCCCCcee
Q 017955 20 DPTQYWCHHCEKRVS-IETLA--------N-LPDVICHECKNGFVE 55 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~-~~~~~--------~-~~~~~c~~C~~gFve 55 (363)
....|-|..|.+.|. ..... . ..-|.|+.|+..|..
T Consensus 21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~ 66 (98)
T 2gqj_A 21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKS 66 (98)
T ss_dssp TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSC
T ss_pred cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCC
Confidence 346799999999887 43221 1 235899999999864
No 163
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=46.65 E-value=17 Score=30.26 Aligned_cols=44 Identities=20% Similarity=0.420 Sum_probs=29.7
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHH-----H-hc-----CCCCCCcCc
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPW-----L-DS-----RNTCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~W-----L-k~-----~~sCPlCR~ 326 (363)
.+..|.||.+- ++.+..=.|-..||..||.+= | +. .=.|++|+-
T Consensus 56 ~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 45669999864 223333358999999999974 2 21 127999954
No 164
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=46.46 E-value=6.1 Score=21.50 Aligned_cols=13 Identities=38% Similarity=0.810 Sum_probs=10.1
Q ss_pred eecccCCCCceee
Q 017955 44 VICHECKNGFVES 56 (363)
Q Consensus 44 ~~c~~C~~gFve~ 56 (363)
+.|+.|+..|...
T Consensus 2 ~~C~~C~k~f~~~ 14 (27)
T 1znf_A 2 YKCGLCERSFVEK 14 (27)
T ss_dssp CBCSSSCCBCSSH
T ss_pred ccCCCCCCcCCCH
Confidence 6789999888653
No 165
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=46.34 E-value=5.9 Score=21.85 Aligned_cols=12 Identities=25% Similarity=0.919 Sum_probs=10.0
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 1ard_A 3 FVCEVCTRAFAR 14 (29)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCcccCC
Confidence 679999998864
No 166
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=46.26 E-value=6.8 Score=28.97 Aligned_cols=31 Identities=26% Similarity=0.563 Sum_probs=24.6
Q ss_pred ccccccccccccccCCceEEeCC-CCcccHhhHHHH
Q 017955 280 ETIVCAICKDTVNVGETATKLPC-GHVYHGDCIVPW 314 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC-~H~Fh~~CI~~W 314 (363)
+..-|.||.++- .++.+.| +-+||..|.++.
T Consensus 7 e~pWC~ICneDA----tlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 7 GLPWCCICNEDA----TLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp CCSSCTTTCSCC----CEEETTTTSEEECSSHHHHH
T ss_pred CCCeeEEeCCCC----eEEecCCCCceehHHHHHHH
Confidence 345699999983 5788889 789999997664
No 167
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=45.87 E-value=4.5 Score=32.62 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=22.7
Q ss_pred ccccccccccc----c---CCceEEeCCCCcccHhhHHHH
Q 017955 282 IVCAICKDTVN----V---GETATKLPCGHVYHGDCIVPW 314 (363)
Q Consensus 282 ~~C~ICle~f~----~---~e~~~~LPC~H~Fh~~CI~~W 314 (363)
..|.||+..-. . ++.+....|+..||..||..+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~ 41 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFT 41 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCCh
Confidence 35999987542 1 233444569999999999765
No 168
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=45.85 E-value=9.2 Score=32.71 Aligned_cols=46 Identities=17% Similarity=0.394 Sum_probs=32.0
Q ss_pred ccccccccccccc--cCCceEEeCCCCcccHhhHHHHHhcCC--CCCCcCc
Q 017955 280 ETIVCAICKDTVN--VGETATKLPCGHVYHGDCIVPWLDSRN--TCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~--~~e~~~~LPC~H~Fh~~CI~~WLk~~~--sCPlCR~ 326 (363)
....|.+|...|. .+......-|.|.+|..|= .|+.... .|-+|+.
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~-~~~~~~~~W~C~vC~k 116 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS-HAHPEEQGWLCDPCHL 116 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE-ECCSSSSSCEEHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc-cccCCCCcEeeHHHHH
Confidence 4678999999875 3334555569999999997 3444332 4777755
No 169
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=51.56 E-value=4.4 Score=22.14 Aligned_cols=15 Identities=33% Similarity=0.817 Sum_probs=11.9
Q ss_pred eecccCCCCceeecc
Q 017955 44 VICHECKNGFVESIP 58 (363)
Q Consensus 44 ~~c~~C~~gFve~~~ 58 (363)
+.|+.|+..|...-.
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQ 17 (26)
Confidence 679999999986544
No 170
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.24 E-value=5.2 Score=27.70 Aligned_cols=42 Identities=10% Similarity=0.266 Sum_probs=31.6
Q ss_pred CCceeeeecCCcceeeeccC-CCceecccCCCCceeeccCCCC
Q 017955 21 PTQYWCHHCEKRVSIETLAN-LPDVICHECKNGFVESIPVTLT 62 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~~-~~~~~c~~C~~gFve~~~~~~~ 62 (363)
...|-|..|.+.+....... ...+.|+.|+..|...-....+
T Consensus 16 ~~~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f~~~~~l~~H 58 (73)
T 2ctu_A 16 DRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58 (73)
T ss_dssp CSEEECSSSCCEEECCCCCCCSSSCCCHHHHHTCSCCCSSCCC
T ss_pred CCCeeCCcccchhCCHHHhCcCCCCCCCCCChhhcCHHHHHHH
Confidence 45799999999887764332 3568999999999877665555
No 171
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=44.99 E-value=10 Score=31.74 Aligned_cols=33 Identities=15% Similarity=0.374 Sum_probs=24.0
Q ss_pred ccccccccccccc-c-CCceEEeCCCCcccHhhHH
Q 017955 280 ETIVCAICKDTVN-V-GETATKLPCGHVYHGDCIV 312 (363)
Q Consensus 280 ~~~~C~ICle~f~-~-~e~~~~LPC~H~Fh~~CI~ 312 (363)
....|.||...|. . +......-|.|.+|..|-.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 5678999999984 2 2244445599999998854
No 172
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=44.96 E-value=7.4 Score=28.32 Aligned_cols=10 Identities=30% Similarity=0.780 Sum_probs=4.4
Q ss_pred cccccccccc
Q 017955 283 VCAICKDTVN 292 (363)
Q Consensus 283 ~C~ICle~f~ 292 (363)
.|.+|...+.
T Consensus 29 ~C~~C~~~L~ 38 (76)
T 1iml_A 29 KCEKCGKTLT 38 (76)
T ss_dssp BCTTTCCBCC
T ss_pred CccccCccCC
Confidence 4444444443
No 173
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=44.80 E-value=6.6 Score=21.71 Aligned_cols=12 Identities=33% Similarity=0.916 Sum_probs=9.8
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 689999998864
No 174
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.73 E-value=9.3 Score=27.76 Aligned_cols=41 Identities=27% Similarity=0.594 Sum_probs=29.6
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
...|..|-..+..++.+. .-+..||..|. .|-.|++.|...
T Consensus 9 ~~~C~~C~~~I~~~~~v~--a~~~~~H~~CF--------~C~~C~~~L~~~ 49 (76)
T 2cu8_A 9 ASKCPKCDKTVYFAEKVS--SLGKDWHKFCL--------KCERCSKTLTPG 49 (76)
T ss_dssp CCBCTTTCCBCCTTTEEE--ETTEEEETTTC--------BCSSSCCBCCTT
T ss_pred CCCCcCCCCEeECCeEEE--ECCeEeeCCCC--------CCCCCCCccCCC
Confidence 356999998887555443 34778888885 588898888753
No 175
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=44.54 E-value=5.8 Score=27.82 Aligned_cols=36 Identities=22% Similarity=0.483 Sum_probs=26.0
Q ss_pred CCCceeee--ecCCcceeeecc--------CCCceecccCCCCcee
Q 017955 20 DPTQYWCH--HCEKRVSIETLA--------NLPDVICHECKNGFVE 55 (363)
Q Consensus 20 ~~~~~~C~--~C~~~~~~~~~~--------~~~~~~c~~C~~gFve 55 (363)
....|-|. .|.+.+...... ...-|.|+.|+..|..
T Consensus 16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 61 (73)
T 1f2i_G 16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61 (73)
T ss_dssp CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCC
Confidence 35679997 699887654322 2345999999999964
No 176
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=44.40 E-value=6.4 Score=22.97 Aligned_cols=14 Identities=36% Similarity=0.759 Sum_probs=11.0
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 7 ~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 7 GYVCALCLKKFVSS 20 (35)
T ss_dssp SEECSSSCCEESSH
T ss_pred CeECCCCcchhCCH
Confidence 48899999988753
No 177
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=44.36 E-value=5.6 Score=28.24 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=21.1
Q ss_pred CceeeeecCCcceeeecc--------CCCceecccCCCCcee
Q 017955 22 TQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVE 55 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve 55 (363)
..|-|..|.+.+...... ....+.|+.|+..|..
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 69 (82)
T 2kmk_A 28 RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQ 69 (82)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESS
T ss_pred CCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCC
Confidence 457788887766544222 2344778888877753
No 178
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.15 E-value=5.5 Score=28.28 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=18.7
Q ss_pred Cceeeee--cCCcceeee---------ccCCCceeccc--CCCCcee
Q 017955 22 TQYWCHH--CEKRVSIET---------LANLPDVICHE--CKNGFVE 55 (363)
Q Consensus 22 ~~~~C~~--C~~~~~~~~---------~~~~~~~~c~~--C~~gFve 55 (363)
..|-|.. |.+.+.... -....-+.|+. |+..|..
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~ 52 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNF 52 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESS
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCC
Confidence 4566665 776655321 11234467766 7776654
No 179
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=44.14 E-value=7.5 Score=21.44 Aligned_cols=12 Identities=17% Similarity=0.434 Sum_probs=9.9
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
|.|+.|+..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1klr_A 3 YQCQYCEFRSAD 14 (30)
T ss_dssp CCCSSSSCCCSC
T ss_pred ccCCCCCCccCC
Confidence 679999998864
No 180
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=43.88 E-value=13 Score=27.34 Aligned_cols=29 Identities=31% Similarity=0.727 Sum_probs=20.8
Q ss_pred CCCceeeeecCCcceeeeccCCCceecccCCCCcee
Q 017955 20 DPTQYWCHHCEKRVSIETLANLPDVICHECKNGFVE 55 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve 55 (363)
...+-.|..|.+.|- |.-+.| +|++-|--
T Consensus 12 k~~~~rC~~C~kkvg------l~~f~C-rCg~~FC~ 40 (64)
T 1wfh_A 12 PQRPNRCTVCRKRVG------LTGFMC-RCGTTFCG 40 (64)
T ss_dssp CSSCCCCTTTCCCCC------TTCEEC-SSSCEECT
T ss_pred CCcCCcChhhCCccC------ccCEEe-ecCCEecc
Confidence 345678999995543 235899 89998853
No 181
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=43.76 E-value=7.6 Score=23.08 Aligned_cols=13 Identities=23% Similarity=0.762 Sum_probs=10.8
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-|.|+.|+..|..
T Consensus 11 ~~~C~~C~k~f~~ 23 (37)
T 1p7a_A 11 PFQCPDCDRSFSR 23 (37)
T ss_dssp SBCCTTTCCCBSS
T ss_pred CccCCCCCcccCc
Confidence 3889999999964
No 182
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=43.69 E-value=2.4 Score=35.01 Aligned_cols=47 Identities=17% Similarity=0.314 Sum_probs=29.6
Q ss_pred ccccccccccccccCC-ceEEeCCCCcccHhhHHHHHhcCCCCCCcCc
Q 017955 280 ETIVCAICKDTVNVGE-TATKLPCGHVYHGDCIVPWLDSRNTCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e-~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~ 326 (363)
....|.+|...|..-. .-..-.||.+||..|..........|-.|-.
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred ccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 3457999999887422 2223359999999998776665667777744
No 183
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=43.42 E-value=3 Score=33.33 Aligned_cols=45 Identities=29% Similarity=0.573 Sum_probs=26.8
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCcC
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRFE 327 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~~ 327 (363)
.|.||...-.....+..-.|...||..||.+=|.... .||.|+.-
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 4666765433222333334899999999986444322 58877553
No 184
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=43.14 E-value=7.2 Score=21.47 Aligned_cols=12 Identities=25% Similarity=0.553 Sum_probs=10.0
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 4 ~~C~~C~k~f~~ 15 (28)
T 2kvf_A 4 YSCSVCGKRFSL 15 (28)
T ss_dssp EECSSSCCEESC
T ss_pred ccCCCCCcccCC
Confidence 789999998864
No 185
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=43.03 E-value=7 Score=21.58 Aligned_cols=12 Identities=25% Similarity=0.722 Sum_probs=10.0
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
|.|+.|+..|..
T Consensus 4 ~~C~~C~~~f~~ 15 (30)
T 2m0d_A 4 YQCDYCGRSFSD 15 (30)
T ss_dssp EECTTTCCEESC
T ss_pred ccCCCCCcccCC
Confidence 789999998864
No 186
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.89 E-value=7.9 Score=29.43 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=25.1
Q ss_pred CCceeeeecCCcceeeecc--------CCCceecccCCCCceeecc
Q 017955 21 PTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFVESIP 58 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFve~~~ 58 (363)
...|-| .|.+.|...... ...-+.|+.|+..|.....
T Consensus 8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~ 52 (110)
T 2csh_A 8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH 52 (110)
T ss_dssp CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHH
T ss_pred CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHH
Confidence 457899 899877654322 2345889999988876543
No 187
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=42.46 E-value=15 Score=27.07 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=22.5
Q ss_pred ccccccccccccCCceE-EeCCCCcccHhhHHH
Q 017955 282 IVCAICKDTVNVGETAT-KLPCGHVYHGDCIVP 313 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~-~LPC~H~Fh~~CI~~ 313 (363)
..|.+|...|..-.... .-.||++||..|...
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 57999999887432222 224999999999643
No 188
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=42.36 E-value=5.2 Score=29.76 Aligned_cols=46 Identities=26% Similarity=0.551 Sum_probs=30.2
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHH---------hcCCCCCCcCcC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWL---------DSRNTCPVCRFE 327 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WL---------k~~~sCPlCR~~ 327 (363)
...| ||...+..+.-+..-.|..=||..|+.--. ...-.||.|+..
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 3456 898876533344444599999999984221 235589999653
No 189
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.26 E-value=14 Score=27.92 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=24.5
Q ss_pred ccccccccccccccccCCce-EEeCCCCcccHhhHHH
Q 017955 278 EQETIVCAICKDTVNVGETA-TKLPCGHVYHGDCIVP 313 (363)
Q Consensus 278 ~~~~~~C~ICle~f~~~e~~-~~LPC~H~Fh~~CI~~ 313 (363)
+.....|.+|...|..-..- -.-.||.+||..|...
T Consensus 11 d~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 11 TNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 33556899999998743221 2234999999999643
No 190
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=42.17 E-value=7.4 Score=21.32 Aligned_cols=12 Identities=33% Similarity=0.902 Sum_probs=9.5
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2m0f_A 3 LKCRECGKQFTT 14 (29)
T ss_dssp EECTTTSCEESC
T ss_pred ccCCCCCCccCC
Confidence 679999888853
No 191
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=42.15 E-value=10 Score=32.02 Aligned_cols=18 Identities=11% Similarity=0.126 Sum_probs=8.2
Q ss_pred HHHHHhhhcCCCCCCCCC
Q 017955 88 LRLIAQAARDEDAPQQLT 105 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~ 105 (363)
++.|+++....+..-+|.
T Consensus 76 ~~Dl~~AV~~~e~~dFL~ 93 (140)
T 2byk_A 76 YEHLSQVVNKNKNLEFLL 93 (140)
T ss_dssp HHHHHHHHHTCSTTGGGT
T ss_pred HHHHHHHHhcCchhhhHh
Confidence 445555554444443443
No 192
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=42.02 E-value=5.4 Score=22.17 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=9.9
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
|.|+.|+..|..
T Consensus 4 ~~C~~C~k~f~~ 15 (27)
T 2kvg_A 4 YRCPLCRAGCPS 15 (27)
T ss_dssp EEETTTTEEESC
T ss_pred cCCCCCCcccCC
Confidence 789999988864
No 193
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=41.87 E-value=5.2 Score=32.73 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=19.7
Q ss_pred ceeeeecCCcceeeeccC--------CCceecccCCCCcee
Q 017955 23 QYWCHHCEKRVSIETLAN--------LPDVICHECKNGFVE 55 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~~~--------~~~~~c~~C~~gFve 55 (363)
.|-|..|.+.|.....+. ..-|.|+.|+..|..
T Consensus 22 ~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 62 (133)
T 2lt7_A 22 YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPL 62 (133)
T ss_dssp EEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESS
T ss_pred CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeeccc
Confidence 467777776665543322 234677777777654
No 194
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=41.82 E-value=11 Score=33.59 Aligned_cols=35 Identities=23% Similarity=0.581 Sum_probs=24.6
Q ss_pred ccccccccccccccCCceEE-eCCCCcccHhhHHHH
Q 017955 280 ETIVCAICKDTVNVGETATK-LPCGHVYHGDCIVPW 314 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~-LPC~H~Fh~~CI~~W 314 (363)
....|.+|...|..-..-.. -.||++||..|....
T Consensus 160 ~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 160 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp CCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred CCCccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 35789999999874332222 349999999996543
No 195
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.81 E-value=7.4 Score=27.93 Aligned_cols=36 Identities=25% Similarity=0.676 Sum_probs=25.8
Q ss_pred CCceeeeecCCcceeeecc--------CC----CceecccCCCCceee
Q 017955 21 PTQYWCHHCEKRVSIETLA--------NL----PDVICHECKNGFVES 56 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~--------~~----~~~~c~~C~~gFve~ 56 (363)
...|-|..|.+.|...... .. .-|.|+.|+..|...
T Consensus 13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~ 60 (86)
T 1x6h_A 13 EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60 (86)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCH
Confidence 4579999999888654221 11 349999999999654
No 196
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=40.62 E-value=16 Score=28.14 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=24.2
Q ss_pred ccccccccccccccCCc-eEEeCCCCcccHhhHHHH
Q 017955 280 ETIVCAICKDTVNVGET-ATKLPCGHVYHGDCIVPW 314 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~-~~~LPC~H~Fh~~CI~~W 314 (363)
....|.+|...|..-.. --.-.||++||..|....
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 43 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFS 43 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEE
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCCc
Confidence 44679999998874322 222349999999997653
No 197
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=40.51 E-value=3.2 Score=30.59 Aligned_cols=47 Identities=19% Similarity=0.302 Sum_probs=29.5
Q ss_pred cccccccccccccccCCceEEeCCCCcccHhhHHHHHh---cCCCCCCcCc
Q 017955 279 QETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLD---SRNTCPVCRF 326 (363)
Q Consensus 279 ~~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk---~~~sCPlCR~ 326 (363)
.....| ||...+..+.-+..-.|..=||..|+.--.. ..-.||.|+.
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 355668 9988765322344445999999999854221 1236888854
No 198
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=39.99 E-value=6.7 Score=28.44 Aligned_cols=11 Identities=27% Similarity=0.764 Sum_probs=6.2
Q ss_pred eecccCCCCce
Q 017955 44 VICHECKNGFV 54 (363)
Q Consensus 44 ~~c~~C~~gFv 54 (363)
+.|+.|+..|.
T Consensus 63 ~~C~~C~~~f~ 73 (90)
T 1a1h_A 63 FACDICGRKFA 73 (90)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCchhC
Confidence 55555555554
No 199
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.90 E-value=13 Score=28.34 Aligned_cols=42 Identities=5% Similarity=0.094 Sum_probs=26.5
Q ss_pred CCceeeeecCCcceeeec-----------cCCCceecccCCCCc--eeeccCCCC
Q 017955 21 PTQYWCHHCEKRVSIETL-----------ANLPDVICHECKNGF--VESIPVTLT 62 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~-----------~~~~~~~c~~C~~gF--ve~~~~~~~ 62 (363)
...|-|..|.+.|..... ..-+-+.|+.|+..| ...-....+
T Consensus 17 ~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H 71 (115)
T 2dmi_A 17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM 71 (115)
T ss_dssp CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCC
T ss_pred CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHH
Confidence 456999999987764311 112345699999998 555444444
No 200
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=39.61 E-value=6.2 Score=24.94 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=20.1
Q ss_pred CCceeeeecCCcceeeec--------cCCCceecccCC
Q 017955 21 PTQYWCHHCEKRVSIETL--------ANLPDVICHECK 50 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~--------~~~~~~~c~~C~ 50 (363)
...|-|..|.+.|..... ....-+.||.|+
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg 45 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG 45 (45)
T ss_dssp CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence 456889999887765432 224567888885
No 201
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=39.60 E-value=8.3 Score=21.44 Aligned_cols=12 Identities=25% Similarity=0.719 Sum_probs=9.8
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 679999998864
No 202
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=39.15 E-value=8.9 Score=22.44 Aligned_cols=14 Identities=21% Similarity=0.707 Sum_probs=10.9
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 7 ~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 7 PFVCRICLSAFTTK 20 (35)
T ss_dssp CEECSSSCCEESSH
T ss_pred CeeCCCCCcccCCH
Confidence 37899999988653
No 203
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=39.06 E-value=6.3 Score=31.04 Aligned_cols=34 Identities=24% Similarity=0.469 Sum_probs=24.2
Q ss_pred CceeeeecCCcceeeeccC------CCceecccCCCCcee
Q 017955 22 TQYWCHHCEKRVSIETLAN------LPDVICHECKNGFVE 55 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~~~~~------~~~~~c~~C~~gFve 55 (363)
..|-|..|.+.|....... ...+.|+.|+..|..
T Consensus 73 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~ 112 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTS 112 (129)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSS
T ss_pred CCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCC
Confidence 4688999998886543221 334899999998864
No 204
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=45.14 E-value=6.4 Score=21.91 Aligned_cols=16 Identities=19% Similarity=0.574 Sum_probs=12.2
Q ss_pred eecccCCCCceeeccC
Q 017955 44 VICHECKNGFVESIPV 59 (363)
Q Consensus 44 ~~c~~C~~gFve~~~~ 59 (363)
|.|+.|+..|...-..
T Consensus 3 ~~C~~C~k~f~~~~~l 18 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSL 18 (29)
Confidence 6799999999765443
No 205
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=38.60 E-value=5.9 Score=33.93 Aligned_cols=46 Identities=26% Similarity=0.608 Sum_probs=30.1
Q ss_pred ccccccccccccccCC-ceEEeCCCCcccHhhHHHHHh-----cCCCCCCcCc
Q 017955 280 ETIVCAICKDTVNVGE-TATKLPCGHVYHGDCIVPWLD-----SRNTCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e-~~~~LPC~H~Fh~~CI~~WLk-----~~~sCPlCR~ 326 (363)
....| ||......+. -+..-.|..-||..|+.--.. ..-.||.|+.
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 44568 9998765333 343445999999999853211 2347999976
No 206
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.49 E-value=9.3 Score=22.43 Aligned_cols=13 Identities=15% Similarity=0.348 Sum_probs=10.2
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-|.|+.|+..|..
T Consensus 9 ~~~C~~C~k~f~~ 21 (36)
T 2elt_A 9 PYKCPQCSYASAI 21 (36)
T ss_dssp SEECSSSSCEESS
T ss_pred CCCCCCCCcccCC
Confidence 4788999988864
No 207
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=38.44 E-value=16 Score=28.99 Aligned_cols=49 Identities=20% Similarity=0.411 Sum_probs=32.5
Q ss_pred cccccccccccccCCceEEe--CCCCcccHhhHHHHH---h-------cCCCCCCcCcCCC
Q 017955 281 TIVCAICKDTVNVGETATKL--PCGHVYHGDCIVPWL---D-------SRNTCPVCRFELP 329 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~L--PC~H~Fh~~CI~~WL---k-------~~~sCPlCR~~l~ 329 (363)
...|+||...+......+.- .|..=||..|+.--. + .+-.||.|+....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 35799999988654333333 588999999984221 0 2337999976543
No 208
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=38.35 E-value=16 Score=24.99 Aligned_cols=31 Identities=26% Similarity=0.552 Sum_probs=18.3
Q ss_pred CceeeeecCCcceeeecc-----CCCc-eecccCCCC
Q 017955 22 TQYWCHHCEKRVSIETLA-----NLPD-VICHECKNG 52 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~~~~-----~~~~-~~c~~C~~g 52 (363)
.+|-|-.|.--.--+.-. .+|+ .+||.|+.+
T Consensus 3 ~~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CCEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred CEEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCc
Confidence 368888898211111111 4664 799999865
No 209
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=38.28 E-value=14 Score=33.30 Aligned_cols=35 Identities=20% Similarity=0.558 Sum_probs=24.8
Q ss_pred ccccccccccccccCCceE-EeCCCCcccHhhHHHH
Q 017955 280 ETIVCAICKDTVNVGETAT-KLPCGHVYHGDCIVPW 314 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~-~LPC~H~Fh~~CI~~W 314 (363)
....|.+|...|..-..-. .-.||++||..|...+
T Consensus 163 ~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~ 198 (226)
T 3zyq_A 163 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY 198 (226)
T ss_dssp CCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEE
T ss_pred cCCCCcCcCCCCCccccccccCCCcCEeChhhcCCc
Confidence 3468999999887432222 2349999999997654
No 210
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=38.18 E-value=10 Score=22.25 Aligned_cols=12 Identities=33% Similarity=0.916 Sum_probs=9.9
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 3 ~~C~~C~k~F~~ 14 (33)
T 1rim_A 3 FACPECPKRFMR 14 (33)
T ss_dssp CCCSSSCCCCSS
T ss_pred ccCCCCCchhCC
Confidence 679999998864
No 211
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.11 E-value=9.3 Score=22.58 Aligned_cols=13 Identities=15% Similarity=0.350 Sum_probs=10.2
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-|.|+.|+..|..
T Consensus 9 ~~~C~~C~k~f~~ 21 (36)
T 2elq_A 9 PFKCSLCEYATRS 21 (36)
T ss_dssp SEECSSSSCEESC
T ss_pred CccCCCCCchhCC
Confidence 4788888888864
No 212
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.50 E-value=11 Score=22.72 Aligned_cols=14 Identities=14% Similarity=0.444 Sum_probs=11.0
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 9 ~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 9 LYYCSQCHYSSITK 22 (37)
T ss_dssp EEECSSSSCEEECH
T ss_pred CeECCCCCcccCCH
Confidence 38899999988753
No 213
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.18 E-value=10 Score=22.58 Aligned_cols=14 Identities=21% Similarity=0.536 Sum_probs=10.8
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 9 ~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 9 AMKCPYCDFYFMKN 22 (37)
T ss_dssp CEECSSSSCEECSS
T ss_pred CeECCCCChhhccC
Confidence 38899999888653
No 214
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.07 E-value=18 Score=26.84 Aligned_cols=43 Identities=28% Similarity=0.611 Sum_probs=30.6
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
....|..|...+...+.+. .-+..||..|. .|-.|+..|....
T Consensus 14 ~~~~C~~C~~~I~~~e~v~--a~~~~wH~~CF--------~C~~C~~~L~~~~ 56 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERLC--VNGHFFHRSCF--------RCHTCEATLWPGG 56 (82)
T ss_dssp SSCBCSSSCCBCCTTTBCC--BTTBCCBTTTC--------BCSSSCCBCCTTS
T ss_pred CCCCCcccCCCcccceEEE--ECCCeeCCCcC--------EEcCCCCCcCCCc
Confidence 3467999999886554443 34778998885 5888888876544
No 215
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=36.69 E-value=9.2 Score=22.24 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=14.8
Q ss_pred eecccCCCCceeeccCCCC
Q 017955 44 VICHECKNGFVESIPVTLT 62 (363)
Q Consensus 44 ~~c~~C~~gFve~~~~~~~ 62 (363)
+.|+.|+..|...-....+
T Consensus 3 ~~C~~C~k~f~~~~~L~~H 21 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKH 21 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSS
T ss_pred CCCCCCCcccCCHHHHHHH
Confidence 6799999999876655544
No 216
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=36.60 E-value=7.4 Score=37.90 Aligned_cols=49 Identities=18% Similarity=0.358 Sum_probs=0.0
Q ss_pred ccccccccccccccCC-ceEEeCCCCcccHhhHHHHHhc-------CCCCCCcCcCC
Q 017955 280 ETIVCAICKDTVNVGE-TATKLPCGHVYHGDCIVPWLDS-------RNTCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e-~~~~LPC~H~Fh~~CI~~WLk~-------~~sCPlCR~~l 328 (363)
....|.+|...|..-. .-.+-.||++||..|...++.. ...|-.|-..+
T Consensus 374 ~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l 430 (434)
T 3mpx_A 374 HVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGEL 430 (434)
T ss_dssp ---------------------------------------------------------
T ss_pred cCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHH
Confidence 4567999999887322 2223359999999999776421 23677775544
No 217
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=42.72 E-value=7.4 Score=21.61 Aligned_cols=16 Identities=19% Similarity=0.663 Sum_probs=12.2
Q ss_pred eecccCCCCceeeccC
Q 017955 44 VICHECKNGFVESIPV 59 (363)
Q Consensus 44 ~~c~~C~~gFve~~~~ 59 (363)
+.|+.|+..|...-..
T Consensus 4 ~~C~~C~k~f~~~~~l 19 (30)
T 2lvr_A 4 YVCIHCQRQFADPGAL 19 (30)
Confidence 7899999998765443
No 218
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=36.37 E-value=19 Score=27.92 Aligned_cols=29 Identities=21% Similarity=0.503 Sum_probs=20.6
Q ss_pred CCCceeeeecCCcceeeecc----------------CCC-ceecccCCCC
Q 017955 20 DPTQYWCHHCEKRVSIETLA----------------NLP-DVICHECKNG 52 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~----------------~~~-~~~c~~C~~g 52 (363)
...+|-|-.|. -.-++ .|| +.+||.|+-+
T Consensus 32 ~m~~y~C~vCG----yvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 77 (87)
T 1s24_A 32 AYLKWICITCG----HIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGAT 77 (87)
T ss_dssp CCCEEEETTTT----EEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCC
T ss_pred CCceEECCCCC----eEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCC
Confidence 45689999999 33332 465 4799999864
No 219
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.31 E-value=12 Score=27.68 Aligned_cols=39 Identities=26% Similarity=0.629 Sum_probs=28.9
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELP 329 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~ 329 (363)
...|..|-..+..++.+.. -+..||..|+ .|-.|+..|.
T Consensus 15 ~~~C~~C~~~I~~~~~v~a--~~~~wH~~CF--------~C~~C~~~L~ 53 (80)
T 2dj7_A 15 PSHCAGCKEEIKHGQSLLA--LDKQWHVSCF--------KCQTCSVILT 53 (80)
T ss_dssp CSCCTTTCCCCSSSCCEEE--TTEEECTTTC--------BCSSSCCBCS
T ss_pred CCCCcCcCCeeCCCeEEEE--CCcccccccC--------CcCcCCCCcC
Confidence 4679999988875555444 3678888885 5888988886
No 220
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=36.30 E-value=17 Score=32.12 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=24.0
Q ss_pred CCceeeeecCCc-ceeeeccCCCceecccCCCCcee
Q 017955 21 PTQYWCHHCEKR-VSIETLANLPDVICHECKNGFVE 55 (363)
Q Consensus 21 ~~~~~C~~C~~~-~~~~~~~~~~~~~c~~C~~gFve 55 (363)
..+..|-.|... ..+-.+..--++||..|+--+-|
T Consensus 19 n~~~~CPECGs~~t~IV~D~erGE~VCsdCGLVLEE 54 (197)
T 3k1f_M 19 NIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSD 54 (197)
T ss_dssp CCCCCCTTTCCSSCCEEEEGGGTEEEETTTCBBCCC
T ss_pred ccCeECcCCCCcCCeEEEeCCCCEEEEcCCCCCcCC
Confidence 445689999963 33445566788999999754433
No 221
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=35.94 E-value=6.3 Score=29.60 Aligned_cols=48 Identities=17% Similarity=0.424 Sum_probs=31.1
Q ss_pred ccccccccccccccCCceEEe--CCCCcccHhhHHHHHh---------cCCCCCCcCcCC
Q 017955 280 ETIVCAICKDTVNVGETATKL--PCGHVYHGDCIVPWLD---------SRNTCPVCRFEL 328 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L--PC~H~Fh~~CI~~WLk---------~~~sCPlCR~~l 328 (363)
....| ||......+.-+..- .|..-||..|+.---+ .+-.||.|+..-
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 34557 898875444445444 5999999999853211 234799997643
No 222
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.74 E-value=11 Score=22.14 Aligned_cols=13 Identities=23% Similarity=0.675 Sum_probs=10.4
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 9 ~~~C~~C~k~f~~ 21 (36)
T 2elr_A 9 THLCDMCGKKFKS 21 (36)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CeecCcCCCCcCc
Confidence 4789999998864
No 223
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.64 E-value=11 Score=22.31 Aligned_cols=13 Identities=23% Similarity=0.414 Sum_probs=9.6
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-|.|+.|+..|..
T Consensus 9 ~~~C~~C~k~f~~ 21 (36)
T 2els_A 9 IFTCEYCNKVFKF 21 (36)
T ss_dssp CEECTTTCCEESS
T ss_pred CEECCCCCceeCC
Confidence 3778888888753
No 224
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=35.58 E-value=4.5 Score=28.95 Aligned_cols=42 Identities=26% Similarity=0.620 Sum_probs=24.9
Q ss_pred cccccccccccccCCceEEeC--CC-CcccHhhHHHHHhcC----CCCCCcCc
Q 017955 281 TIVCAICKDTVNVGETATKLP--CG-HVYHGDCIVPWLDSR----NTCPVCRF 326 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LP--C~-H~Fh~~CI~~WLk~~----~sCPlCR~ 326 (363)
..-| ||..... +..+..=. |. .-||..|+. |... -.||.|+.
T Consensus 10 ~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 10 PTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 3446 8987643 32222223 44 579999997 4432 26888854
No 225
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=35.52 E-value=14 Score=29.75 Aligned_cols=48 Identities=25% Similarity=0.419 Sum_probs=30.5
Q ss_pred ccccccccccccccCCceEEe--CCCCcccHhhHHHHHhcCC----CCCCcCcCCCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKL--PCGHVYHGDCIVPWLDSRN----TCPVCRFELPTDD 332 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L--PC~H~Fh~~CI~~WLk~~~----sCPlCR~~l~~~d 332 (363)
.+..|.||.. .++.+..- .|...||..|+. |.... .||.|+-.+..+.
T Consensus 14 ~~~~C~~C~~---~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~k~ 67 (107)
T 4gne_A 14 HEDYCFQCGD---GGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECSSA 67 (107)
T ss_dssp SCSSCTTTCC---CSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTCSB
T ss_pred CCCCCCcCCC---CCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCCCC
Confidence 5567999984 23333333 488899999997 54422 5887765555443
No 226
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=35.40 E-value=11 Score=28.62 Aligned_cols=38 Identities=18% Similarity=0.401 Sum_probs=26.4
Q ss_pred CCCceeeeecCCcceeeeccC------CCceecccCCCCceeec
Q 017955 20 DPTQYWCHHCEKRVSIETLAN------LPDVICHECKNGFVESI 57 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~~------~~~~~c~~C~~gFve~~ 57 (363)
....|-|..|.+.+....... ...+.|+.|+..|....
T Consensus 13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~ 56 (107)
T 1wjp_A 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPE 56 (107)
T ss_dssp CCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHH
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHH
Confidence 346799999998876543221 12488999999996543
No 227
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.16 E-value=11 Score=22.19 Aligned_cols=14 Identities=29% Similarity=0.577 Sum_probs=10.9
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 9 ~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 9 LYDCHICERKFKNE 22 (36)
T ss_dssp CEECSSSCCEESSH
T ss_pred CeECCCCCCccCCH
Confidence 48899999888653
No 228
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=35.06 E-value=3 Score=33.71 Aligned_cols=44 Identities=23% Similarity=0.483 Sum_probs=27.8
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcCC----CCCCcCc
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRN----TCPVCRF 326 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~----sCPlCR~ 326 (363)
.|.||...-..+..+..-.|...||..|+.+=|.... .||.|+.
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWE 107 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccc
Confidence 5778876543333444445999999999986443322 4777754
No 229
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=34.74 E-value=28 Score=26.98 Aligned_cols=27 Identities=15% Similarity=0.281 Sum_probs=19.7
Q ss_pred cceeeeccCCCceecccCCCCceeeccC
Q 017955 32 RVSIETLANLPDVICHECKNGFVESIPV 59 (363)
Q Consensus 32 ~~~~~~~~~~~~~~c~~C~~gFve~~~~ 59 (363)
+|++.+.. --.++||||+.-|+.+=..
T Consensus 38 rVyL~i~~-~g~~~CpYCg~~y~~~~~~ 64 (87)
T 2jz8_A 38 HIFIDMGS-TDEKICPYCSTLYRYDPSL 64 (87)
T ss_dssp SCEEECTT-CCEECCTTTCCEEECCTTS
T ss_pred EEEEEcCC-CCeEECCCCCCEeEcCCCC
Confidence 45566544 3678999999999977544
No 230
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=33.97 E-value=20 Score=25.27 Aligned_cols=13 Identities=38% Similarity=1.030 Sum_probs=9.5
Q ss_pred CCC-ceecccCCCC
Q 017955 40 NLP-DVICHECKNG 52 (363)
Q Consensus 40 ~~~-~~~c~~C~~g 52 (363)
.|| +.+||.|+-+
T Consensus 32 ~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 32 DIPDDWVCPLCGVG 45 (54)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCcCCCCc
Confidence 354 4799999865
No 231
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=33.79 E-value=11 Score=28.93 Aligned_cols=34 Identities=15% Similarity=0.368 Sum_probs=23.4
Q ss_pred CCceeeeecCCcceeeecc--------CCCceecccCCCCce
Q 017955 21 PTQYWCHHCEKRVSIETLA--------NLPDVICHECKNGFV 54 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~--------~~~~~~c~~C~~gFv 54 (363)
...|-|..|.+.+...... ...-+.|+.|+..|.
T Consensus 5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 46 (124)
T 2dlq_A 5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYF 46 (124)
T ss_dssp CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCS
T ss_pred CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhc
Confidence 4578899999877644222 234588999988774
No 232
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=32.96 E-value=5.5 Score=28.42 Aligned_cols=42 Identities=26% Similarity=0.593 Sum_probs=25.8
Q ss_pred cccccccccccccCCceEEeC--CC-CcccHhhHHHHHhcC----CCCCCcCc
Q 017955 281 TIVCAICKDTVNVGETATKLP--CG-HVYHGDCIVPWLDSR----NTCPVCRF 326 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LP--C~-H~Fh~~CI~~WLk~~----~sCPlCR~ 326 (363)
..-| ||..... +.-+..=. |. .-||..|+. |... -.||.|+.
T Consensus 9 ~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 9 PTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 3446 9988643 33333334 65 689999997 3332 26888864
No 233
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=32.95 E-value=12 Score=22.58 Aligned_cols=13 Identities=31% Similarity=0.672 Sum_probs=10.8
Q ss_pred eecccCCCCceee
Q 017955 44 VICHECKNGFVES 56 (363)
Q Consensus 44 ~~c~~C~~gFve~ 56 (363)
+.|+.|+..|...
T Consensus 7 ~~C~~C~k~f~~~ 19 (39)
T 1njq_A 7 YTCSFCKREFRSA 19 (39)
T ss_dssp EECTTTCCEESSH
T ss_pred eECCCCCcccCCH
Confidence 7899999998653
No 234
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=32.07 E-value=14 Score=22.69 Aligned_cols=28 Identities=25% Similarity=0.455 Sum_probs=19.7
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhH
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCI 311 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI 311 (363)
..|+.|-..+...+.+.. =+..||..|.
T Consensus 4 ~~C~~C~k~Vy~~Ek~~~--~g~~~Hk~CF 31 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVNC--LDKFWHKACF 31 (31)
T ss_dssp CBCSSSCSBCCGGGCCCS--SSSCCCGGGC
T ss_pred CcCCccCCEEecceeEEE--CCeEecccCC
Confidence 469999987765444432 4788999883
No 235
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=31.89 E-value=12 Score=24.03 Aligned_cols=13 Identities=38% Similarity=0.823 Sum_probs=6.2
Q ss_pred CCCcCcCCCCCCh
Q 017955 321 CPVCRFELPTDDP 333 (363)
Q Consensus 321 CPlCR~~l~~~d~ 333 (363)
||+|.+.+.+.+.
T Consensus 8 CP~C~~~l~s~~~ 20 (34)
T 3mjh_B 8 CPQCMKSLGSADE 20 (34)
T ss_dssp CTTTCCEESSHHH
T ss_pred CcHHHHHcCCHHH
Confidence 5555554444433
No 236
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.72 E-value=9.3 Score=22.68 Aligned_cols=13 Identities=31% Similarity=0.759 Sum_probs=10.2
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-|.|+.|+..|..
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elo_A 9 SYSCPVCEKSFSE 21 (37)
T ss_dssp CCEETTTTEECSS
T ss_pred CcCCCCCCCccCC
Confidence 3789999888864
No 237
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=31.36 E-value=23 Score=25.94 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=26.9
Q ss_pred CCCCCCCceeeee--cCCcceeeec--------cCCCceecc--cCCCCcee
Q 017955 16 ASDTDPTQYWCHH--CEKRVSIETL--------ANLPDVICH--ECKNGFVE 55 (363)
Q Consensus 16 ~~~~~~~~~~C~~--C~~~~~~~~~--------~~~~~~~c~--~C~~gFve 55 (363)
........|.|.. |.+.+..... .....+.|+ .|+..|..
T Consensus 8 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~ 59 (100)
T 2ebt_A 8 PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59 (100)
T ss_dssp CCCCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESS
T ss_pred cccccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCC
Confidence 3344567899996 9987765422 223559997 59988854
No 238
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.21 E-value=31 Score=25.10 Aligned_cols=41 Identities=29% Similarity=0.606 Sum_probs=29.1
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
..|..|...+..++.++ ..=+..||..|. +|-.|++.|...
T Consensus 16 ~~C~~C~~~I~~~~~~~-~a~~~~~H~~CF--------~C~~C~~~L~~~ 56 (82)
T 1x63_A 16 PKCKGCFKAIVAGDQNV-EYKGTVWHKDCF--------TCSNCKQVIGTG 56 (82)
T ss_dssp CBCSSSCCBCCSSSCEE-ECSSCEEETTTC--------CCSSSCCCCTTS
T ss_pred CcCccCCcccccCceEE-EECccccccccC--------chhhCCCccCCC
Confidence 56999988877544432 234778998885 688898888654
No 239
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=31.17 E-value=9.8 Score=31.02 Aligned_cols=35 Identities=23% Similarity=0.543 Sum_probs=25.2
Q ss_pred CceeeeecCCcceeeeccC--------CCceecccCCCCceee
Q 017955 22 TQYWCHHCEKRVSIETLAN--------LPDVICHECKNGFVES 56 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~~~~~--------~~~~~c~~C~~gFve~ 56 (363)
..|-|-.|.+.|.....+. ..-++|+.|+..|...
T Consensus 49 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~ 91 (133)
T 2lt7_A 49 KKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY 91 (133)
T ss_dssp SCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred CCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence 4688999998887664332 2348999999988644
No 240
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=30.97 E-value=28 Score=25.67 Aligned_cols=47 Identities=26% Similarity=0.338 Sum_probs=29.0
Q ss_pred cccccccccccc--ccCCceEEeCCCCcccHhhHHHHHhcC--CCCCCcCc
Q 017955 280 ETIVCAICKDTV--NVGETATKLPCGHVYHGDCIVPWLDSR--NTCPVCRF 326 (363)
Q Consensus 280 ~~~~C~ICle~f--~~~e~~~~LPC~H~Fh~~CI~~WLk~~--~sCPlCR~ 326 (363)
....|.||...- ..+..+..-.|.-.||..|+..-+... =.||.|+.
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 567799998753 222233333599999999997532111 15777743
No 241
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.89 E-value=33 Score=24.97 Aligned_cols=35 Identities=11% Similarity=0.284 Sum_probs=23.3
Q ss_pred CCCceeeeecCCcceeeeccCC------CceecccCCCCce
Q 017955 20 DPTQYWCHHCEKRVSIETLANL------PDVICHECKNGFV 54 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~~~------~~~~c~~C~~gFv 54 (363)
....-.|..|.+.|..++..-+ .=++|..|+.-+.
T Consensus 12 ~~~~~~C~~C~~~I~~~~~~a~~~~~H~~CF~C~~C~~~L~ 52 (79)
T 1x62_A 12 AQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLK 52 (79)
T ss_dssp CCCCCCCSSSCCCCCSSCEECSSCEECTTTTSCSSSCCCHH
T ss_pred CCCCCccccCCCCccCcEEEECcceeCcCcCeeCCCCCCCC
Confidence 3556789999988876533221 2267889987653
No 242
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=30.28 E-value=5.3 Score=28.70 Aligned_cols=37 Identities=19% Similarity=0.405 Sum_probs=24.7
Q ss_pred ccccccccccccCC---ceEEeC--CCCcccHhhHHHHHhcC
Q 017955 282 IVCAICKDTVNVGE---TATKLP--CGHVYHGDCIVPWLDSR 318 (363)
Q Consensus 282 ~~C~ICle~f~~~e---~~~~LP--C~H~Fh~~CI~~WLk~~ 318 (363)
..||-|.-.+.... .++... |++.||..|..+|-...
T Consensus 7 k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~~~~ 48 (60)
T 1wd2_A 7 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHG 48 (60)
T ss_dssp CCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGGGG
T ss_pred eECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCcccCC
Confidence 46888877666333 233333 88999999998886543
No 243
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.10 E-value=18 Score=28.33 Aligned_cols=38 Identities=16% Similarity=0.173 Sum_probs=27.0
Q ss_pred CCCCceeeeecCCcceeee---------c---cCCCceecccCCCCceee
Q 017955 19 TDPTQYWCHHCEKRVSIET---------L---ANLPDVICHECKNGFVES 56 (363)
Q Consensus 19 ~~~~~~~C~~C~~~~~~~~---------~---~~~~~~~c~~C~~gFve~ 56 (363)
.....|-|..|.+.+.... - ..-.-|.|+.|+..|...
T Consensus 14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~ 63 (102)
T 2ghf_A 14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63 (102)
T ss_dssp CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESST
T ss_pred CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCH
Confidence 3456799999999886532 1 123459999999999653
No 244
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.88 E-value=33 Score=24.24 Aligned_cols=41 Identities=27% Similarity=0.570 Sum_probs=26.4
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
..|..|...+...+.++. .-+..||..|. .|-.|++.|...
T Consensus 6 ~~C~~C~~~I~~~~~~~~-a~~~~~H~~CF--------~C~~C~~~L~~~ 46 (72)
T 1x4k_A 6 SGCQECKKTIMPGTRKME-YKGSSWHETCF--------ICHRCQQPIGTK 46 (72)
T ss_dssp CCBSSSCCCCCSSSCEEE-ETTEEEETTTT--------CCSSSCCCCCSS
T ss_pred CCCccCCCcccCCceEEE-ECcCeecccCC--------cccccCCccCCC
Confidence 468888887765432222 24667887775 578888777654
No 245
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.58 E-value=17 Score=22.75 Aligned_cols=16 Identities=25% Similarity=0.561 Sum_probs=10.7
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYG 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCcccCcccCCh
Confidence 4567777777766554
No 246
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=29.06 E-value=17 Score=24.60 Aligned_cols=24 Identities=25% Similarity=0.650 Sum_probs=18.6
Q ss_pred ceeeeecCCcceeeeccCCCceecccCCCCc
Q 017955 23 QYWCHHCEKRVSIETLANLPDVICHECKNGF 53 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gF 53 (363)
.-||..|.+.++ +.+.|..|+-.+
T Consensus 14 pt~C~~C~~~l~-------qG~~C~~C~~~~ 37 (52)
T 1faq_A 14 LAFCDICQKFLL-------NGFRCQTCGYKF 37 (52)
T ss_dssp CEECTTSSSEEC-------SEEECTTTTCCB
T ss_pred CcCCCCcccccc-------cCCEeCCCCCeE
Confidence 569999996654 789999997544
No 247
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.94 E-value=16 Score=22.75 Aligned_cols=15 Identities=27% Similarity=0.640 Sum_probs=11.7
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-|.|+.|+..|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (44)
T 2epv_A 11 KPYECNECGKAFIWK 25 (44)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCCcccCch
Confidence 348899999998653
No 248
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.74 E-value=18 Score=21.94 Aligned_cols=17 Identities=18% Similarity=0.475 Sum_probs=13.0
Q ss_pred CceecccCCCCceeecc
Q 017955 42 PDVICHECKNGFVESIP 58 (363)
Q Consensus 42 ~~~~c~~C~~gFve~~~ 58 (363)
.-+.|+.|+..|...-.
T Consensus 10 k~~~C~~C~k~f~~~~~ 26 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQKGS 26 (42)
T ss_dssp CSBCCTTTTCCBSSHHH
T ss_pred CCeeCCCccchhCCHHH
Confidence 34889999999976543
No 249
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=28.34 E-value=17 Score=22.13 Aligned_cols=15 Identities=20% Similarity=0.733 Sum_probs=11.5
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 10 ~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 10 TPYLCGQCGKSFTQR 24 (42)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCcccCCH
Confidence 348899999988653
No 250
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.24 E-value=17 Score=22.36 Aligned_cols=15 Identities=27% Similarity=0.729 Sum_probs=11.9
Q ss_pred ceecccCCCCceeec
Q 017955 43 DVICHECKNGFVESI 57 (363)
Q Consensus 43 ~~~c~~C~~gFve~~ 57 (363)
-+.|+.|+..|...-
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 12 PYVCNECGKAFRSKS 26 (44)
T ss_dssp SSCCTTTCCCCSSHH
T ss_pred CeECCCCCCccCCHH
Confidence 488999999997543
No 251
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.09 E-value=18 Score=22.66 Aligned_cols=16 Identities=31% Similarity=0.582 Sum_probs=10.3
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytt_A 10 EKPYQCSECGKSFSGS 25 (46)
T ss_dssp CCTTCCSSSCCCCSSH
T ss_pred CCCeeCCCCCcccCCH
Confidence 4457777777766554
No 252
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=27.76 E-value=18 Score=22.12 Aligned_cols=14 Identities=29% Similarity=0.653 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 10 ~~~C~~C~k~f~~~ 23 (42)
T 2el5_A 10 PYECSECGKAFNRK 23 (42)
T ss_dssp SEECSSSCCEESSH
T ss_pred CccCCCcChhhCCH
Confidence 48899999998653
No 253
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.74 E-value=18 Score=22.42 Aligned_cols=14 Identities=21% Similarity=0.650 Sum_probs=11.4
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (44)
T 2yu5_A 12 PFKCSKCDRVFTQR 25 (44)
T ss_dssp SEECSSSSCEESSS
T ss_pred CeECCCCCchhCCH
Confidence 48999999999754
No 254
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.50 E-value=31 Score=24.35 Aligned_cols=41 Identities=27% Similarity=0.550 Sum_probs=27.0
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
..|..|...+...+.+ +..-+..||..|. +|-.|++.|...
T Consensus 6 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~CF--------~C~~C~~~L~~~ 46 (72)
T 1wyh_A 6 SGCSACGETVMPGSRK-LEYGGQTWHEHCF--------LCSGCEQPLGSR 46 (72)
T ss_dssp CBCSSSCCBCCSSSCE-ECSTTCCEETTTC--------BCTTTCCBTTTS
T ss_pred CCCccCCCccccCccE-EEECccccCcccC--------eECCCCCcCCCC
Confidence 4688888877643222 2235778888775 588888877654
No 255
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.44 E-value=25 Score=26.39 Aligned_cols=40 Identities=23% Similarity=0.595 Sum_probs=27.4
Q ss_pred ccccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 280 ETIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
....|..|-..+. ++.+ ..-+..||..|+ .|-.|++.|..
T Consensus 24 ~~~~C~~C~~~I~-~~~v--~a~~~~~H~~CF--------~C~~C~~~L~~ 63 (90)
T 2dar_A 24 RTPMCAHCNQVIR-GPFL--VALGKSWHPEEF--------NCAHCKNTMAY 63 (90)
T ss_dssp CCCBBSSSCCBCC-SCEE--EETTEEECTTTC--------BCSSSCCBCSS
T ss_pred CCCCCccCCCEec-ceEE--EECCccccccCC--------ccCCCCCCCCC
Confidence 3466888888775 3332 335788888775 58888887764
No 256
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.36 E-value=17 Score=22.12 Aligned_cols=14 Identities=29% Similarity=0.669 Sum_probs=11.2
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 11 ~~~C~~C~k~f~~~ 24 (42)
T 2en2_A 11 PYKCETCGARFVQV 24 (42)
T ss_dssp SEECTTTCCEESSH
T ss_pred CEeCCCcChhhCCH
Confidence 48899999998653
No 257
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=27.32 E-value=17 Score=23.44 Aligned_cols=14 Identities=14% Similarity=0.498 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|..|++.|...
T Consensus 7 p~~C~~C~k~F~~~ 20 (48)
T 3iuf_A 7 PYACDICGKRYKNR 20 (48)
T ss_dssp CEECTTTCCEESSH
T ss_pred CEECCCcCcccCCH
Confidence 48899999999654
No 258
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.24 E-value=18 Score=22.59 Aligned_cols=16 Identities=25% Similarity=0.573 Sum_probs=12.3
Q ss_pred CceecccCCCCceeec
Q 017955 42 PDVICHECKNGFVESI 57 (363)
Q Consensus 42 ~~~~c~~C~~gFve~~ 57 (363)
.-|.|+.|+..|...-
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enf_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 3488999999997543
No 259
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.97 E-value=18 Score=22.59 Aligned_cols=15 Identities=27% Similarity=0.760 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-|.|+.|+..|...
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 11 RHYECSECGKAFIQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCCCCCCCCcccCCH
Confidence 348999999998653
No 260
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=26.88 E-value=20 Score=27.48 Aligned_cols=50 Identities=20% Similarity=0.551 Sum_probs=32.5
Q ss_pred cccccccccccccc--CCceEEeCCCCcccHhhHHHHHhc--------CCCCCCcCcCCC
Q 017955 280 ETIVCAICKDTVNV--GETATKLPCGHVYHGDCIVPWLDS--------RNTCPVCRFELP 329 (363)
Q Consensus 280 ~~~~C~ICle~f~~--~e~~~~LPC~H~Fh~~CI~~WLk~--------~~sCPlCR~~l~ 329 (363)
....|.||...-.. +..+..=.|...||..|+.+-|.. .=.||.|+....
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 35679999975331 223333349999999999876541 126999966443
No 261
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=26.71 E-value=14 Score=27.09 Aligned_cols=40 Identities=33% Similarity=0.605 Sum_probs=27.8
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
..|..|...+..++.+. .-+..||..|. .|-.|++.|...
T Consensus 8 ~~C~~C~~~I~~~~~~~--a~~~~~H~~CF--------~C~~C~~~L~~~ 47 (81)
T 1a7i_A 8 NKCGACGRTVYHAEEVQ--CDGRSFHRCCF--------LCMVCRKNLDST 47 (81)
T ss_dssp CBCSSSCCBCSSTTEEE--ETTEEEESSSE--------ECSSSCCEECSS
T ss_pred CcCcCcCccccCceeEE--eCCcccccccC--------ccCCCCCCCCCC
Confidence 56888988876555432 35778888775 488888877654
No 262
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.58 E-value=36 Score=24.13 Aligned_cols=40 Identities=25% Similarity=0.522 Sum_probs=26.3
Q ss_pred cccccccccccc--CCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 282 IVCAICKDTVNV--GETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 282 ~~C~ICle~f~~--~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
..|..|-..+.. ...+ +..-+..||..|. .|-.|++.|..
T Consensus 6 ~~C~~C~~~I~~~~~~~~-~~a~~~~wH~~CF--------~C~~C~~~L~~ 47 (72)
T 1x4l_A 6 SGCAGCTNPISGLGGTKY-ISFEERQWHNDCF--------NCKKCSLSLVG 47 (72)
T ss_dssp CSBTTTTBCCCCSSSCSC-EECSSCEECTTTC--------BCSSSCCBCTT
T ss_pred CCCcCCCccccCCCCcce-EEECCcccCcccC--------EeccCCCcCCC
Confidence 568888887764 2222 2235778888775 58888887753
No 263
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.55 E-value=14 Score=23.12 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=8.8
Q ss_pred CceeeeecCCcceee
Q 017955 22 TQYWCHHCEKRVSIE 36 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~ 36 (363)
..|-|..|.|.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 11 KPFDCIDCGKAFSDH 25 (46)
T ss_dssp CSBCCTTTCCCBSSH
T ss_pred CCeECCCCCceeCCH
Confidence 456666666665543
No 264
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=26.53 E-value=30 Score=24.08 Aligned_cols=13 Identities=38% Similarity=0.899 Sum_probs=9.4
Q ss_pred CCC-ceecccCCCC
Q 017955 40 NLP-DVICHECKNG 52 (363)
Q Consensus 40 ~~~-~~~c~~C~~g 52 (363)
.|| +.+||.|+-+
T Consensus 31 ~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 31 DLPDDWVCPLCGAP 44 (52)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCCCCCCC
Confidence 465 4799999863
No 265
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.53 E-value=19 Score=21.89 Aligned_cols=13 Identities=38% Similarity=0.869 Sum_probs=10.6
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 10 ~~~C~~C~k~f~~ 22 (42)
T 2yte_A 10 PYSCAECKETFSD 22 (42)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CeECCCCCCccCC
Confidence 3889999998864
No 266
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.47 E-value=19 Score=22.45 Aligned_cols=15 Identities=33% Similarity=0.919 Sum_probs=11.9
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yts_A 11 KPYICNECGKSFIQK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCEECCCCChhhCCh
Confidence 348999999998754
No 267
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=26.40 E-value=13 Score=23.55 Aligned_cols=14 Identities=21% Similarity=0.622 Sum_probs=10.2
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|++.|...
T Consensus 8 p~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 8 RFMCLPCGIAFSSP 21 (36)
T ss_dssp CCEETTTTEECSCH
T ss_pred CeECCCCCCccCCH
Confidence 37788888888653
No 268
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=26.27 E-value=27 Score=26.11 Aligned_cols=33 Identities=21% Similarity=0.473 Sum_probs=25.5
Q ss_pred ceeeee--cCCcceeeeccCCCceecc-----cCCCCceeec
Q 017955 23 QYWCHH--CEKRVSIETLANLPDVICH-----ECKNGFVESI 57 (363)
Q Consensus 23 ~~~C~~--C~~~~~~~~~~~~~~~~c~-----~C~~gFve~~ 57 (363)
.-||-. |...|..+. ....++|| .|+--|--.=
T Consensus 25 ~~~CP~p~C~~~v~~~~--~~~~v~C~~~~~~~C~~~FC~~C 64 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEP--DQRKVTCEGGNGLGCGFAFCREC 64 (80)
T ss_dssp SCCCCSSSCCCCCCCCS--CTTSBCTTSSSTTCCSCCEETTT
T ss_pred cEECCCCCCCcccEECC--CCCcCCCCCCCCCCCCCeecccc
Confidence 889999 998776653 45669999 8998886443
No 269
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=26.20 E-value=26 Score=25.80 Aligned_cols=25 Identities=28% Similarity=0.686 Sum_probs=18.3
Q ss_pred CCceeeeecCCcceeeeccCCCceecccCCC
Q 017955 21 PTQYWCHHCEKRVSIETLANLPDVICHECKN 51 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~ 51 (363)
...-||.+|...+ .-+.+.|..|+-
T Consensus 33 ~~pt~C~~C~~~l------~~qG~kC~~C~~ 57 (72)
T 2fnf_X 33 GGPGWCDLCGREV------LRQALRCANCKF 57 (72)
T ss_dssp SSCCBCTTTSSBC------SSCCEECTTSSC
T ss_pred CCCcchhhhhHHH------HhCcCccCCCCC
Confidence 3456999999554 457799999863
No 270
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.06 E-value=20 Score=21.80 Aligned_cols=14 Identities=29% Similarity=0.667 Sum_probs=10.9
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 10 ~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 10 VYECQECGKSFRQK 23 (41)
T ss_dssp CEECSSSCCEESSH
T ss_pred CeECCCCCCCcCCH
Confidence 48899999988653
No 271
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.98 E-value=23 Score=21.62 Aligned_cols=15 Identities=20% Similarity=0.359 Sum_probs=11.9
Q ss_pred ceecccCCCCceeec
Q 017955 43 DVICHECKNGFVESI 57 (363)
Q Consensus 43 ~~~c~~C~~gFve~~ 57 (363)
-|.|+.|+..|...-
T Consensus 11 ~~~C~~C~k~f~~~~ 25 (42)
T 2eos_A 11 PYPCEICGTRFRHLQ 25 (42)
T ss_dssp CBCCSSSCCCBSSHH
T ss_pred CEECCCCCCccCCHH
Confidence 488999999997643
No 272
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.84 E-value=20 Score=22.45 Aligned_cols=16 Identities=25% Similarity=0.573 Sum_probs=12.3
Q ss_pred CceecccCCCCceeec
Q 017955 42 PDVICHECKNGFVESI 57 (363)
Q Consensus 42 ~~~~c~~C~~gFve~~ 57 (363)
.-+.|+.|+..|...-
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2yti_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CTTCCSSSCCCCSSHH
T ss_pred cCeECCCCCcccCChh
Confidence 3488999999997643
No 273
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.84 E-value=20 Score=22.44 Aligned_cols=14 Identities=36% Similarity=0.802 Sum_probs=11.4
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 12 PFICSECGKVFTHK 25 (46)
T ss_dssp SCBCTTTCCBCSSH
T ss_pred CEECCccCcccCCH
Confidence 48899999998654
No 274
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.78 E-value=22 Score=22.30 Aligned_cols=14 Identities=29% Similarity=0.835 Sum_probs=11.1
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 12 PYECKECRKTFIQI 25 (46)
T ss_dssp SCCCSSSCCCCSSH
T ss_pred CcCCCCcCchhCCH
Confidence 48899999988653
No 275
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=25.69 E-value=31 Score=26.26 Aligned_cols=32 Identities=31% Similarity=0.705 Sum_probs=24.3
Q ss_pred eeeeecCCcceeeeccCCCceecccCCCCceeeccCC
Q 017955 24 YWCHHCEKRVSIETLANLPDVICHECKNGFVESIPVT 60 (363)
Q Consensus 24 ~~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~~~~~ 60 (363)
+.||-|- .+..+++-.-||.|++.=+..++.-
T Consensus 16 LrC~aCf-----~~t~~~~k~FCp~CGn~TL~Rvsvs 47 (79)
T 2con_A 16 LRCHGCF-----KTTSDMNRVFCGHCGNKTLKKVSVT 47 (79)
T ss_dssp EECSSSC-----CEESCSSCCSCSSSCCSCCEEEECB
T ss_pred eEecccc-----eECCCcccccccccCcccceEEEEE
Confidence 5688887 3446667788999999988877643
No 276
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.52 E-value=23 Score=22.13 Aligned_cols=14 Identities=29% Similarity=0.781 Sum_probs=11.4
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2yth_A 12 PFQCEECGKRFTQN 25 (46)
T ss_dssp SBCCSSSCCCBSSH
T ss_pred CCCCCCCCcccCCH
Confidence 48899999999754
No 277
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.22 E-value=40 Score=23.67 Aligned_cols=38 Identities=24% Similarity=0.577 Sum_probs=24.4
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
..|..|...+.. +. +..-+..||..|. .|-.|++.|..
T Consensus 6 ~~C~~C~~~I~~-~~--~~a~~~~~H~~CF--------~C~~C~~~L~~ 43 (70)
T 2d8z_A 6 SGCVQCKKPITT-GG--VTYREQPWHKECF--------VCTACRKQLSG 43 (70)
T ss_dssp CBCSSSCCBCCS-SE--EESSSSEEETTTS--------BCSSSCCBCTT
T ss_pred CCCcccCCeecc-ce--EEECccccCCCCC--------ccCCCCCcCCc
Confidence 458888777653 22 2335677887775 57778777753
No 278
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=25.13 E-value=52 Score=26.11 Aligned_cols=52 Identities=10% Similarity=0.124 Sum_probs=35.7
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
-..|..|...+..........=+.+||..|..+-+..+..|-.|...|....
T Consensus 32 CF~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~~~ 83 (122)
T 1m3v_A 32 CLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSGGD 83 (122)
T ss_dssp HHCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCCEE
T ss_pred CCCcCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCchh
Confidence 4578888877752111122334678999999887766668999999887644
No 279
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.08 E-value=24 Score=21.81 Aligned_cols=14 Identities=36% Similarity=0.859 Sum_probs=11.0
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 10 ~~~C~~C~k~f~~~ 23 (43)
T 2yrm_A 10 AFFCNECDCRFSEE 23 (43)
T ss_dssp CBCCSSSCCCBSSH
T ss_pred CEECCCCCCeeCCh
Confidence 38899999998643
No 280
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.01 E-value=20 Score=21.98 Aligned_cols=14 Identities=29% Similarity=0.736 Sum_probs=11.2
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (44)
T 2eof_A 12 PYECNECQKAFNTK 25 (44)
T ss_dssp SEECTTTCCEESCH
T ss_pred CeECCCCCcccCCH
Confidence 48999999998653
No 281
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.94 E-value=21 Score=22.29 Aligned_cols=13 Identities=31% Similarity=0.603 Sum_probs=10.9
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2en3_A 12 PFQCKECGMNFSW 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeeCcccChhhCC
Confidence 4899999999964
No 282
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=24.89 E-value=20 Score=23.51 Aligned_cols=14 Identities=14% Similarity=0.306 Sum_probs=11.5
Q ss_pred CceecccCCCCcee
Q 017955 42 PDVICHECKNGFVE 55 (363)
Q Consensus 42 ~~~~c~~C~~gFve 55 (363)
.-+.|+.|+..|..
T Consensus 23 k~~~C~~C~k~f~~ 36 (54)
T 1yui_A 23 QPATCPICYAVIRQ 36 (54)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCccCCCCCcccCC
Confidence 34899999999865
No 283
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=24.80 E-value=19 Score=22.54 Aligned_cols=15 Identities=27% Similarity=0.547 Sum_probs=8.5
Q ss_pred CceeeeecCCcceee
Q 017955 22 TQYWCHHCEKRVSIE 36 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~ 36 (363)
..|-|..|.+.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ely_A 11 KPFKCVECGKGFSRR 25 (46)
T ss_dssp CSBCCSSSCCCBSST
T ss_pred CCcccCccCcccCCH
Confidence 346666666655543
No 284
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.80 E-value=16 Score=22.85 Aligned_cols=15 Identities=20% Similarity=0.534 Sum_probs=8.3
Q ss_pred CceeeeecCCcceee
Q 017955 22 TQYWCHHCEKRVSIE 36 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~ 36 (363)
..|-|..|.+.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2ytg_A 11 KPFKCGECGKSYNQR 25 (46)
T ss_dssp CSEECTTTCCEESSS
T ss_pred CCeECCCCCcccCCH
Confidence 346666666555443
No 285
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=24.78 E-value=59 Score=22.88 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=21.3
Q ss_pred eeeecCCcceeeeccCCCceecccCCCCceeec
Q 017955 25 WCHHCEKRVSIETLANLPDVICHECKNGFVESI 57 (363)
Q Consensus 25 ~C~~C~~~~~~~~~~~~~~~~c~~C~~gFve~~ 57 (363)
.|..|...- +..+..-.++||..|+--+-|.+
T Consensus 13 ~Cp~C~~~~-lv~D~~~ge~vC~~CGlVl~e~~ 44 (58)
T 1dl6_A 13 TCPNHPDAI-LVEDYRAGDMICPECGLVVGDRV 44 (58)
T ss_dssp SBTTBSSSC-CEECSSSCCEECTTTCCEECCSC
T ss_pred cCcCCCCCc-eeEeCCCCeEEeCCCCCEEeccc
Confidence 799997422 44566678999999954433433
No 286
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.76 E-value=23 Score=22.15 Aligned_cols=13 Identities=38% Similarity=0.910 Sum_probs=10.6
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-|.|+.|+..|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2emz_A 12 PFKCNECGKGFGR 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 4889999998865
No 287
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.73 E-value=36 Score=24.80 Aligned_cols=40 Identities=38% Similarity=0.950 Sum_probs=28.1
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTDD 332 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~d 332 (363)
..|..|...+. +..+. .-+..||..|. .|-.|++.|....
T Consensus 16 ~~C~~C~~~I~-~~~v~--a~~~~wH~~CF--------~C~~C~~~L~~~~ 55 (81)
T 1v6g_A 16 TRCFSCDQFIE-GEVVS--ALGKTYHPDCF--------VCAVCRLPFPPGD 55 (81)
T ss_dssp CBCTTTCCBCC-SCCEE--ETTEEECTTTS--------SCSSSCCCCCSSS
T ss_pred CcCccccCEec-cceEE--ECCceeCccCC--------ccccCCCCCCCCC
Confidence 46999988876 33332 35778888885 5889988886543
No 288
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.64 E-value=25 Score=21.94 Aligned_cols=16 Identities=25% Similarity=0.491 Sum_probs=10.3
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em8_A 10 EKPYKCVECGKGYKRR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECcccCchhCCH
Confidence 3467777777666554
No 289
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.61 E-value=23 Score=22.12 Aligned_cols=14 Identities=29% Similarity=0.688 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 12 PYKCNECGKAFRAH 25 (46)
T ss_dssp CCCCTTTTCCCSSH
T ss_pred CeECCcCChhhCCH
Confidence 48899999998654
No 290
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.58 E-value=50 Score=23.41 Aligned_cols=25 Identities=20% Similarity=0.493 Sum_probs=17.7
Q ss_pred CCCceeeeecCCcceeeeccCCCceecccCCCCc
Q 017955 20 DPTQYWCHHCEKRVSIETLANLPDVICHECKNGF 53 (363)
Q Consensus 20 ~~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~gF 53 (363)
...+-+|..|. . ..-|+||.|.--|
T Consensus 9 ~~~~~~C~vC~----~-----~~kY~CPrC~~~y 33 (56)
T 2yqq_A 9 KCSTVVCVICL----E-----KPKYRCPACRVPY 33 (56)
T ss_dssp CCCCCCCTTTC----S-----CCSEECTTTCCEE
T ss_pred CCCCCccCcCc----C-----CCeeeCCCCCCCe
Confidence 44455899999 2 4459999997543
No 291
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=24.42 E-value=9.6 Score=27.44 Aligned_cols=42 Identities=29% Similarity=0.627 Sum_probs=25.4
Q ss_pred cccccccccccccCCceEEeC--CC-CcccHhhHHHHHhc----CCCCCCcCc
Q 017955 281 TIVCAICKDTVNVGETATKLP--CG-HVYHGDCIVPWLDS----RNTCPVCRF 326 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LP--C~-H~Fh~~CI~~WLk~----~~sCPlCR~ 326 (363)
..-| ||..... +.-+..=. |. .-||..||. |.. +-.||.|+.
T Consensus 11 ~~yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 11 PTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CcEE-ECCCCCC-CCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCccc
Confidence 3446 9988643 33233234 54 789999996 332 226888865
No 292
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.32 E-value=22 Score=22.26 Aligned_cols=14 Identities=29% Similarity=0.733 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 12 HYECSECGKAFARK 25 (46)
T ss_dssp CEECSSSCCEESSH
T ss_pred CeECCcCCcccCCH
Confidence 48899999998754
No 293
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.26 E-value=22 Score=22.12 Aligned_cols=15 Identities=27% Similarity=0.669 Sum_probs=11.7
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytf_A 11 KPFECSECQKAFNTK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCcCCCCCCcccCCH
Confidence 348999999988654
No 294
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.23 E-value=22 Score=22.11 Aligned_cols=15 Identities=27% Similarity=0.656 Sum_probs=11.8
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 11 KPYRCGECGKAFAQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCccCCH
Confidence 348899999999754
No 295
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.19 E-value=23 Score=21.87 Aligned_cols=13 Identities=31% Similarity=0.634 Sum_probs=10.6
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2eou_A 12 TSECQECGKIFRH 24 (44)
T ss_dssp CCCCTTTCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 3789999998864
No 296
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.18 E-value=23 Score=22.01 Aligned_cols=15 Identities=20% Similarity=0.709 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ep1_A 11 KPYECSDCGKSFIKK 25 (46)
T ss_dssp CSSCCSSSCCCCSSH
T ss_pred CCcCCCCCCchhCCH
Confidence 348899999998653
No 297
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=24.13 E-value=22 Score=29.69 Aligned_cols=24 Identities=29% Similarity=0.783 Sum_probs=14.8
Q ss_pred eeecCCcceee-eccCCCceecccCCCCc
Q 017955 26 CHHCEKRVSIE-TLANLPDVICHECKNGF 53 (363)
Q Consensus 26 C~~C~~~~~~~-~~~~~~~~~c~~C~~gF 53 (363)
|.+|. -+ +-..-..+|||+|.--|
T Consensus 30 CP~C~----seytYeDg~l~vCPeC~hEW 54 (138)
T 2akl_A 30 CPQCN----SEYTYEDGALLVCPECAHEW 54 (138)
T ss_dssp CTTTC----CCCCEECSSSEEETTTTEEE
T ss_pred CCCCC----CcceEecCCeEECCcccccc
Confidence 77777 33 33444457788887655
No 298
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.08 E-value=26 Score=21.84 Aligned_cols=15 Identities=27% Similarity=0.716 Sum_probs=11.8
Q ss_pred ceecccCCCCceeec
Q 017955 43 DVICHECKNGFVESI 57 (363)
Q Consensus 43 ~~~c~~C~~gFve~~ 57 (363)
-|.|+.|+..|...-
T Consensus 12 ~~~C~~C~k~F~~~~ 26 (47)
T 2epx_A 12 PYECIECGKAFIQNT 26 (47)
T ss_dssp SBCCSSSCCCBSSHH
T ss_pred CEECCccCchhCChH
Confidence 488999999997543
No 299
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=24.06 E-value=29 Score=26.61 Aligned_cols=26 Identities=23% Similarity=0.528 Sum_probs=18.0
Q ss_pred eeeeecCCcceeeeccCCCceecccCC
Q 017955 24 YWCHHCEKRVSIETLANLPDVICHECK 50 (363)
Q Consensus 24 ~~C~~C~~~~~~~~~~~~~~~~c~~C~ 50 (363)
=||.+|...+|.- ...-|.|.|..|+
T Consensus 36 T~Cd~C~~~lWGl-~kqp~G~~C~~C~ 61 (84)
T 2row_A 36 TNCEACMKPLWHM-FKPPPALECRRCH 61 (84)
T ss_dssp EECSSSSSEECCS-SSCCCEEEESSSC
T ss_pred cchhhcCHhhhcc-ccCCCCCEecCCC
Confidence 3899999766652 1122489999995
No 300
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.00 E-value=22 Score=21.95 Aligned_cols=14 Identities=21% Similarity=0.520 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (44)
T 2emb_A 12 RYECSKCQATFNLR 25 (44)
T ss_dssp SEECTTTCCEESCH
T ss_pred CeECCCCCCccCCH
Confidence 48899999998653
No 301
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.95 E-value=20 Score=22.46 Aligned_cols=15 Identities=27% Similarity=0.663 Sum_probs=8.1
Q ss_pred CceeeeecCCcceee
Q 017955 22 TQYWCHHCEKRVSIE 36 (363)
Q Consensus 22 ~~~~C~~C~~~~~~~ 36 (363)
..|-|..|.+.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yu8_A 11 KPYKCNECGKVFTQN 25 (46)
T ss_dssp SSEECSSSCCEESSS
T ss_pred CCeECCcCCchhCCH
Confidence 346666666555443
No 302
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.95 E-value=40 Score=24.26 Aligned_cols=40 Identities=18% Similarity=0.430 Sum_probs=24.9
Q ss_pred cccccccccccc-CCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCC
Q 017955 282 IVCAICKDTVNV-GETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELP 329 (363)
Q Consensus 282 ~~C~ICle~f~~-~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~ 329 (363)
..|..|-..+.. +....+..-+..||..|. .|-.|+..|.
T Consensus 6 ~~C~~C~~~I~~~g~~~~~~a~~~~wH~~CF--------~C~~C~~~L~ 46 (76)
T 1x68_A 6 SGCVACSKPISGLTGAKFICFQDSQWHSECF--------NCGKCSVSLV 46 (76)
T ss_dssp CCCTTTCCCCCTTTTCCEEEETTEEEEGGGC--------BCTTTCCBCS
T ss_pred CCCccCCCcccCCCCceeEEECCcccCcccC--------ChhhCCCcCC
Confidence 468888887663 111122235677888775 5778877775
No 303
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.94 E-value=22 Score=22.13 Aligned_cols=13 Identities=31% Similarity=0.848 Sum_probs=10.6
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eor_A 12 PYNCEECGKAFIH 24 (46)
T ss_dssp SEECTTTCCEESS
T ss_pred CccCCCCCCCcCC
Confidence 4889999998864
No 304
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.77 E-value=23 Score=22.17 Aligned_cols=13 Identities=31% Similarity=0.649 Sum_probs=10.5
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-|.|+.|+..|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em4_A 12 PYECIECGKAFKT 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CcCCCCCCCccCC
Confidence 3889999998864
No 305
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=23.66 E-value=48 Score=24.50 Aligned_cols=32 Identities=25% Similarity=0.620 Sum_probs=21.3
Q ss_pred CCceeeeecCCcceeeecc----------------CCCc-eecccCCC---Cceee
Q 017955 21 PTQYWCHHCEKRVSIETLA----------------NLPD-VICHECKN---GFVES 56 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~----------------~~~~-~~c~~C~~---gFve~ 56 (363)
..+|-|-.|. -.-++ .||+ .+||.|+- -|+..
T Consensus 5 m~~y~C~vCG----yiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~K~~F~~~ 56 (70)
T 1dx8_A 5 EGKYECEACG----YIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPKNQFKSI 56 (70)
T ss_dssp SSCEEETTTC----CEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCBGGGEEEC
T ss_pred CceEEeCCCC----EEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCCHHHceEc
Confidence 3479999998 22332 3554 79999987 46553
No 306
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=23.64 E-value=17 Score=30.54 Aligned_cols=11 Identities=36% Similarity=0.860 Sum_probs=5.4
Q ss_pred eecccCCCCce
Q 017955 44 VICHECKNGFV 54 (363)
Q Consensus 44 ~~c~~C~~gFv 54 (363)
+.|+.|+..|.
T Consensus 134 ~~C~~C~~~f~ 144 (190)
T 2i13_A 134 YKCPECGKSFS 144 (190)
T ss_dssp EECTTTCCEES
T ss_pred eECCCCCcccC
Confidence 44555554443
No 307
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=23.63 E-value=37 Score=23.59 Aligned_cols=38 Identities=18% Similarity=0.554 Sum_probs=26.9
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPT 330 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~ 330 (363)
..|..|...+. ++ .+..-+..||..|. .|-.|+..|..
T Consensus 6 ~~C~~C~~~I~-~~--~~~a~~~~~H~~CF--------~C~~C~~~L~~ 43 (66)
T 1nyp_A 6 PICGACRRPIE-GR--VVNAMGKQWHVEHF--------VCAKCEKPFLG 43 (66)
T ss_dssp CEETTTTEECC-SC--EECCTTSBEETTTC--------BCTTTCCBCSS
T ss_pred CCCcccCCEec-ce--EEEECccccccCcC--------EECCCCCCCCC
Confidence 56888888876 33 23345778888875 58888888764
No 308
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.55 E-value=25 Score=22.02 Aligned_cols=13 Identities=23% Similarity=0.672 Sum_probs=10.5
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2eom_A 12 GHRCSDCGKFFLQ 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCCCCCeeCC
Confidence 4789999998864
No 309
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=23.49 E-value=37 Score=23.87 Aligned_cols=12 Identities=42% Similarity=1.207 Sum_probs=9.0
Q ss_pred CC-ceecccCCCC
Q 017955 41 LP-DVICHECKNG 52 (363)
Q Consensus 41 ~~-~~~c~~C~~g 52 (363)
|| +.+||.|+-+
T Consensus 33 lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 33 IPADWVCPDCGVG 45 (55)
T ss_dssp SCTTCCCTTTCCC
T ss_pred CCCCCcCCCCCCC
Confidence 55 4799999864
No 310
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.48 E-value=23 Score=22.04 Aligned_cols=15 Identities=27% Similarity=0.629 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eow_A 11 KPYKCNECGKAFRAR 25 (46)
T ss_dssp CCEECTTSCCEESSH
T ss_pred CCeeccccCChhcCH
Confidence 348999999988653
No 311
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.47 E-value=23 Score=22.14 Aligned_cols=14 Identities=21% Similarity=0.648 Sum_probs=11.1
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2enh_A 12 PYECDVCRKAFSHH 25 (46)
T ss_dssp SCBCTTTCCBCSSS
T ss_pred CcCCCCcCchhCCH
Confidence 48899999988653
No 312
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=23.29 E-value=24 Score=22.07 Aligned_cols=14 Identities=29% Similarity=0.603 Sum_probs=11.1
Q ss_pred CceecccCCCCcee
Q 017955 42 PDVICHECKNGFVE 55 (363)
Q Consensus 42 ~~~~c~~C~~gFve 55 (363)
.-|.|+.|+..|..
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2emj_A 11 KPFECAECGKSFSI 24 (46)
T ss_dssp CSEECSSSSCEESS
T ss_pred CCEECCCCCcccCC
Confidence 34889999998864
No 313
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.29 E-value=24 Score=22.03 Aligned_cols=15 Identities=27% Similarity=0.731 Sum_probs=11.7
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-|.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 11 KPYQCNECGKAFSQT 25 (46)
T ss_dssp CSSSCCSSCCCCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 348899999998754
No 314
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.26 E-value=24 Score=22.09 Aligned_cols=14 Identities=29% Similarity=0.626 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eoy_A 12 CFKCNKCEKTFSCS 25 (46)
T ss_dssp CEECSSSCCEESSS
T ss_pred CEECcCCCCcCCCH
Confidence 48899999998654
No 315
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=23.20 E-value=31 Score=30.66 Aligned_cols=28 Identities=14% Similarity=0.414 Sum_probs=17.0
Q ss_pred CCceeeeecCCcceeeeccCCCceecccCCC
Q 017955 21 PTQYWCHHCEKRVSIETLANLPDVICHECKN 51 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~~~~~~~~~~c~~C~~ 51 (363)
+...-|..|++... ......+.|+.|+.
T Consensus 8 ~~~~~Cw~C~~~~~---~~~~~~~fC~~c~~ 35 (207)
T 3bvo_A 8 SNYPRCWNCGGPWG---PGREDRFFCPQCRA 35 (207)
T ss_dssp ---CBCSSSCCBCC---SSCSCCCBCTTTCC
T ss_pred CCCCCCCCCCCCcc---cccccccccccccc
Confidence 34567999994321 12346688999974
No 316
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=23.04 E-value=17 Score=22.22 Aligned_cols=14 Identities=36% Similarity=0.992 Sum_probs=9.7
Q ss_pred CCCCCcCcCCCCCC
Q 017955 319 NTCPVCRFELPTDD 332 (363)
Q Consensus 319 ~sCPlCR~~l~~~d 332 (363)
..||+|+..++...
T Consensus 4 ~~CpvCk~q~Pd~k 17 (28)
T 2jvx_A 4 FCCPKCQYQAPDMD 17 (28)
T ss_dssp EECTTSSCEESSHH
T ss_pred ccCccccccCcChH
Confidence 36899988766543
No 317
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=23.04 E-value=36 Score=24.23 Aligned_cols=26 Identities=19% Similarity=0.468 Sum_probs=18.8
Q ss_pred ceeeeecCCcceeeeccCCCceecccCCC
Q 017955 23 QYWCHHCEKRVSIETLANLPDVICHECKN 51 (363)
Q Consensus 23 ~~~C~~C~~~~~~~~~~~~~~~~c~~C~~ 51 (363)
.-||.+|.+.+|.- .-+.+.|..|+-
T Consensus 23 pt~C~~C~~~l~Gl---~~qg~~C~~C~~ 48 (65)
T 2enz_A 23 PTFCEHCGTLLWGL---ARQGLKCDACGM 48 (65)
T ss_dssp CCBCSSSCCBCCCS---SSCSEEESSSCC
T ss_pred CcCchhcChhheec---CCcccccCCCCC
Confidence 45899999666542 237899999963
No 318
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=23.03 E-value=33 Score=27.35 Aligned_cols=37 Identities=27% Similarity=0.673 Sum_probs=20.5
Q ss_pred cccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCC
Q 017955 283 VCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFEL 328 (363)
Q Consensus 283 ~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l 328 (363)
.|..|...+...+.++ ..-++.||..|. .|-.|.+.|
T Consensus 10 ~C~~C~~~I~~~e~~~-~a~~~~~H~~CF--------~C~~C~~~L 46 (123)
T 2l3k_A 10 LCASCDKRIRAYEMTM-RVKDKVYHLECF--------KCAACQKHF 46 (123)
T ss_dssp CCSSSSCCCCTTCCCC-CCSSCCCCTTTC--------BCTTTCCBC
T ss_pred cccCCCCeecCCceEE-EECCcccccccC--------ccccCCCCC
Confidence 5777776665432221 113566776664 466666666
No 319
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.97 E-value=24 Score=22.04 Aligned_cols=14 Identities=21% Similarity=0.698 Sum_probs=11.2
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2yto_A 12 PYKCSDCGKAFTRK 25 (46)
T ss_dssp CEECSSSCCEESSH
T ss_pred CEECcccCCccCCH
Confidence 48999999988653
No 320
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.94 E-value=43 Score=25.02 Aligned_cols=41 Identities=29% Similarity=0.572 Sum_probs=26.5
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
...|..|-..+...+.+ ..-+..||..|. .|-.|...|...
T Consensus 15 ~~~C~~C~~~I~~~~~v--~a~~~~~H~~CF--------~C~~C~~~L~~~ 55 (91)
T 2d8y_A 15 RETCVECQKTVYPMERL--LANQQVFHISCF--------RCSYCNNKLSLG 55 (91)
T ss_dssp SCBCTTTCCBCCTTSEE--ECSSSEEETTTC--------BCTTTCCBCCTT
T ss_pred CCcCccCCCccCCceeE--EECCCEECCCCC--------eeCCCCCCCCCC
Confidence 35688888877644433 345677887775 477777766543
No 321
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.88 E-value=25 Score=21.98 Aligned_cols=14 Identities=29% Similarity=0.570 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 12 CYKCDVCGKEFSQS 25 (46)
T ss_dssp CCBCSSSCCBCSSH
T ss_pred CeECCCCCcccCCH
Confidence 48899999998654
No 322
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=22.86 E-value=27 Score=28.24 Aligned_cols=39 Identities=21% Similarity=0.457 Sum_probs=28.0
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELP 329 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~ 329 (363)
...|.-|-..+.....+ ..-+..||..|. .|-.|+..|.
T Consensus 61 ~~~C~~C~~~I~~~~~v--~a~~~~wH~~CF--------~C~~C~~~L~ 99 (123)
T 2l4z_A 61 WKRCAGCGGKIADRFLL--YAMDSYWHSRCL--------KCSSCQAQLG 99 (123)
T ss_dssp CSBBSSSSSBCCSSSEE--EETTEEEETTTS--------BCTTTCCBGG
T ss_pred CCcCcCCCCCcCCcEEE--EeCCcEEccccc--------CcCcCCCccc
Confidence 46799999887743222 235788998885 5888988875
No 323
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.72 E-value=25 Score=21.94 Aligned_cols=13 Identities=23% Similarity=0.700 Sum_probs=10.7
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2em3_A 12 PYECKVCSKAFTQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCCcccCC
Confidence 4889999998864
No 324
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.71 E-value=17 Score=22.89 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=10.2
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDN 25 (46)
T ss_dssp CCSSSBTTTTBCCSSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 3457777777766654
No 325
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=22.70 E-value=25 Score=21.85 Aligned_cols=14 Identities=21% Similarity=0.496 Sum_probs=11.4
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2el4_A 12 PYGCSQCAKTFSLK 25 (46)
T ss_dssp SEECSSSSCEESSH
T ss_pred ceECCCCCchhCCH
Confidence 48999999999754
No 326
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.62 E-value=25 Score=21.65 Aligned_cols=13 Identities=23% Similarity=0.600 Sum_probs=10.6
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 10 ~~~C~~C~k~f~~ 22 (44)
T 2emx_A 10 PFGCSCCEKAFSS 22 (44)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCCCcccCC
Confidence 4889999998864
No 327
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.37 E-value=25 Score=21.95 Aligned_cols=14 Identities=29% Similarity=0.769 Sum_probs=11.0
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 12 PFKCKECGKAFRQN 25 (46)
T ss_dssp SEECSSSCCEESSH
T ss_pred CEECCcCCchhCCH
Confidence 48899999988653
No 328
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.34 E-value=25 Score=21.88 Aligned_cols=15 Identities=33% Similarity=0.704 Sum_probs=11.5
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
..+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytj_A 11 KPYICAECGKAFTIR 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCChhhCCH
Confidence 348899999988653
No 329
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.23 E-value=28 Score=21.68 Aligned_cols=15 Identities=20% Similarity=0.523 Sum_probs=11.5
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eoq_A 11 KPFKCDICGKSFCGR 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCcCCCcCCchhCCH
Confidence 348899999998653
No 330
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.04 E-value=26 Score=21.83 Aligned_cols=15 Identities=33% Similarity=0.753 Sum_probs=11.5
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emy_A 11 NPYECHECGKAFSRK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred cCcCCCCCCcccCcH
Confidence 348899999988643
No 331
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.02 E-value=27 Score=21.91 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=12.1
Q ss_pred CceecccCCCCceeec
Q 017955 42 PDVICHECKNGFVESI 57 (363)
Q Consensus 42 ~~~~c~~C~~gFve~~ 57 (363)
.-|.|+.|+..|...-
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cccCCCCCCcccCcHH
Confidence 3488999999887643
No 332
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.02 E-value=26 Score=21.82 Aligned_cols=14 Identities=29% Similarity=0.676 Sum_probs=11.2
Q ss_pred CceecccCCCCcee
Q 017955 42 PDVICHECKNGFVE 55 (363)
Q Consensus 42 ~~~~c~~C~~gFve 55 (363)
.-+.|+.|+..|..
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2ytk_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCEeCCcCCCccCC
Confidence 34889999999864
No 333
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.95 E-value=27 Score=21.70 Aligned_cols=13 Identities=23% Similarity=0.626 Sum_probs=10.7
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eov_A 12 PYKCSDCGKSFTW 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CccCCccChhhCC
Confidence 4889999999864
No 334
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.94 E-value=18 Score=22.60 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=9.9
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCcChhhCCH
Confidence 3457777777666543
No 335
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.90 E-value=17 Score=22.73 Aligned_cols=16 Identities=31% Similarity=0.659 Sum_probs=10.2
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en6_A 10 EKPYGCNECGKTFSQK 25 (46)
T ss_dssp SCCEEETTTTEEESSH
T ss_pred CcCeECCCCCcccCch
Confidence 3457777777666554
No 336
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=21.85 E-value=29 Score=21.68 Aligned_cols=16 Identities=38% Similarity=0.675 Sum_probs=10.1
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el6_A 10 VNPYKCSQCEKSFSGK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCeECCCCCcccCCH
Confidence 3457777777666543
No 337
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.84 E-value=26 Score=21.79 Aligned_cols=16 Identities=25% Similarity=0.603 Sum_probs=12.1
Q ss_pred CceecccCCCCceeec
Q 017955 42 PDVICHECKNGFVESI 57 (363)
Q Consensus 42 ~~~~c~~C~~gFve~~ 57 (363)
.-+.|+.|+..|...-
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ep3_A 11 KPYRCAECGKAFTDRS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECCCCCchhCCHH
Confidence 3489999999987543
No 338
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.80 E-value=26 Score=21.87 Aligned_cols=13 Identities=38% Similarity=0.856 Sum_probs=10.4
Q ss_pred ceecccCCCCcee
Q 017955 43 DVICHECKNGFVE 55 (363)
Q Consensus 43 ~~~c~~C~~gFve 55 (363)
-+.|+.|+..|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2en9_A 12 LFKCNECKKTFTQ 24 (46)
T ss_dssp CCBCTTTCCBCSS
T ss_pred CEECCccCcccCC
Confidence 4889999988854
No 339
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.65 E-value=25 Score=21.82 Aligned_cols=14 Identities=29% Similarity=0.641 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eq4_A 12 LYNCKECGKSFSRA 25 (46)
T ss_dssp CCCBTTTTBCCSCH
T ss_pred CeECCCCCCccCch
Confidence 48899999998753
No 340
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.64 E-value=27 Score=21.83 Aligned_cols=14 Identities=29% Similarity=0.757 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2emf_A 12 HFECTECGKAFTRK 25 (46)
T ss_dssp CEECSSSCCEESCH
T ss_pred CeECCCCCchhCCH
Confidence 48899999998754
No 341
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.60 E-value=27 Score=21.75 Aligned_cols=14 Identities=29% Similarity=0.634 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2ene_A 12 PYKCNECGKVFRHN 25 (46)
T ss_dssp SEECSSSCCEESSH
T ss_pred CeECCCCCchhCCh
Confidence 48899999998654
No 342
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=21.56 E-value=27 Score=21.77 Aligned_cols=14 Identities=29% Similarity=0.714 Sum_probs=11.2
Q ss_pred CceecccCCCCcee
Q 017955 42 PDVICHECKNGFVE 55 (363)
Q Consensus 42 ~~~~c~~C~~gFve 55 (363)
..+.|+.|+..|..
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2emk_A 11 KPYECKECGKAFSQ 24 (46)
T ss_dssp CSCBCSSSCCBCSC
T ss_pred CceECCCCCchhCC
Confidence 34889999998865
No 343
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.56 E-value=27 Score=21.68 Aligned_cols=14 Identities=29% Similarity=0.631 Sum_probs=11.4
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2epw_A 12 PCKCTECGKAFCWK 25 (46)
T ss_dssp SEECSSSCCEESSS
T ss_pred CeeCCCCCCccCCH
Confidence 48999999998654
No 344
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.55 E-value=27 Score=21.81 Aligned_cols=14 Identities=29% Similarity=0.591 Sum_probs=11.1
Q ss_pred CceecccCCCCcee
Q 017955 42 PDVICHECKNGFVE 55 (363)
Q Consensus 42 ~~~~c~~C~~gFve 55 (363)
.-|.|+.|+..|..
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2eoo_A 11 RPYGCNECGKNFGR 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCEEccccCcccCC
Confidence 34889999998864
No 345
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.52 E-value=27 Score=21.74 Aligned_cols=15 Identities=20% Similarity=0.494 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eml_A 11 KPYECSVCGKAFSHR 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeeCCCcCCccCCH
Confidence 348899999988653
No 346
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.50 E-value=27 Score=21.69 Aligned_cols=14 Identities=29% Similarity=0.593 Sum_probs=11.4
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 12 PHECRECGKSFSFN 25 (46)
T ss_dssp SCBCTTTCCBCSSH
T ss_pred CeeCCCCCchhCCH
Confidence 48899999998754
No 347
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=21.50 E-value=27 Score=21.74 Aligned_cols=15 Identities=27% Similarity=0.609 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ema_A 11 KRYKCNECGKVFSRN 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred cCcCCCCCcchhCCH
Confidence 348899999998653
No 348
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.44 E-value=28 Score=21.75 Aligned_cols=15 Identities=27% Similarity=0.578 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytq_A 11 KPYGCSECGKAFSSK 25 (46)
T ss_dssp CSCBCSSSCCBCSCH
T ss_pred CCcCCCccChhhCCh
Confidence 348899999998654
No 349
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.37 E-value=19 Score=22.24 Aligned_cols=14 Identities=29% Similarity=0.565 Sum_probs=11.2
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (44)
T 2eoj_A 12 PYECCECGKVFSRK 25 (44)
T ss_dssp SCEETTTTEECSSH
T ss_pred CeeCCCCCCccCCH
Confidence 48899999988754
No 350
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=21.37 E-value=20 Score=27.26 Aligned_cols=12 Identities=25% Similarity=0.769 Sum_probs=6.3
Q ss_pred ceecccCCCCce
Q 017955 43 DVICHECKNGFV 54 (363)
Q Consensus 43 ~~~c~~C~~gFv 54 (363)
.+.|+.|+..|.
T Consensus 66 ~~~C~~C~~~f~ 77 (119)
T 2jp9_A 66 PFQCKTCQRKFS 77 (119)
T ss_dssp CEECTTTCCEES
T ss_pred CccCCccCchhC
Confidence 355555555554
No 351
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=21.33 E-value=27 Score=21.64 Aligned_cols=15 Identities=27% Similarity=0.532 Sum_probs=11.7
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em9_A 11 KPYNCKECGKSFRWA 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCccccccCCh
Confidence 348899999998653
No 352
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.31 E-value=27 Score=21.77 Aligned_cols=15 Identities=27% Similarity=0.707 Sum_probs=11.4
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-|.|+.|+..|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emh_A 11 RPYICTVCGKAFTDR 25 (46)
T ss_dssp CSEECTTTCCEESSH
T ss_pred CCcCCCCCCchhCCH
Confidence 348899999988653
No 353
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.29 E-value=33 Score=24.90 Aligned_cols=12 Identities=17% Similarity=0.241 Sum_probs=8.3
Q ss_pred eecccCCCCcee
Q 017955 44 VICHECKNGFVE 55 (363)
Q Consensus 44 ~~c~~C~~gFve 55 (363)
+.|+.|+..|..
T Consensus 63 ~~C~~C~k~f~~ 74 (95)
T 2ej4_A 63 EECPREGKSFKA 74 (95)
T ss_dssp TTCSSTTCCCSS
T ss_pred cCCCCCCcccCC
Confidence 677777777753
No 354
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.27 E-value=27 Score=21.76 Aligned_cols=15 Identities=33% Similarity=0.685 Sum_probs=11.8
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2eq0_A 11 KPYKCHECGKVFRRN 25 (46)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCeECCCCCchhCCH
Confidence 348999999998754
No 355
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.23 E-value=45 Score=23.83 Aligned_cols=42 Identities=26% Similarity=0.689 Sum_probs=27.6
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
...|..|...+...+.+.. .-+..||..|. .|-.|++.|...
T Consensus 11 ~~~C~~C~~~I~~~~~~~~-a~~~~~H~~CF--------~C~~C~~~L~~~ 52 (77)
T 1g47_A 11 SATCERCKGGFAPAEKIVN-SNGELYHEQCF--------VCAQCFQQFPEG 52 (77)
T ss_dssp CCBCSSSCCBCCSTTTCEE-ETTEEECTTTC--------CCTTTCCCCGGG
T ss_pred CCCchhcCCccCCCceEEE-eCccEeccccC--------eECCCCCCCCCC
Confidence 4668889888764333322 24667888775 588888777543
No 356
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=21.20 E-value=16 Score=27.20 Aligned_cols=19 Identities=16% Similarity=0.602 Sum_probs=15.2
Q ss_pred eccCCCceecccCCCCcee
Q 017955 37 TLANLPDVICHECKNGFVE 55 (363)
Q Consensus 37 ~~~~~~~~~c~~C~~gFve 55 (363)
+.++.|-.+|+.|+..|+.
T Consensus 30 ~I~~Vp~~~C~~CGE~~~~ 48 (78)
T 3ga8_A 30 VLKGIHGLYCVHCEESIMN 48 (78)
T ss_dssp EEEEEEEEEETTTCCEECC
T ss_pred EEcCceeEECCCCCCEEEC
Confidence 3355799999999998874
No 357
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.02 E-value=20 Score=22.43 Aligned_cols=16 Identities=25% Similarity=0.590 Sum_probs=9.7
Q ss_pred CCceeeeecCCcceee
Q 017955 21 PTQYWCHHCEKRVSIE 36 (363)
Q Consensus 21 ~~~~~C~~C~~~~~~~ 36 (363)
...|-|..|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ysp_A 10 EKPYKCEKCGKGYNSK 25 (46)
T ss_dssp CCSEEETTTTEEESCH
T ss_pred CCCeECCCCCCccCCH
Confidence 3457777777665543
No 358
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.00 E-value=28 Score=21.65 Aligned_cols=15 Identities=20% Similarity=0.521 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ep2_A 11 KPYECSICGKSFTKK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCcCCCCCCcccCCH
Confidence 348899999988653
No 359
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.00 E-value=28 Score=21.65 Aligned_cols=15 Identities=33% Similarity=0.793 Sum_probs=11.7
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 11 KPYKCEECGKGFICR 25 (46)
T ss_dssp CSEECSSSCCEESCH
T ss_pred cCccCCCccchhCCH
Confidence 348899999998654
No 360
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.96 E-value=38 Score=23.40 Aligned_cols=20 Identities=20% Similarity=0.489 Sum_probs=13.4
Q ss_pred CCCCCCceeeeecCCcceee
Q 017955 17 SDTDPTQYWCHHCEKRVSIE 36 (363)
Q Consensus 17 ~~~~~~~~~C~~C~~~~~~~ 36 (363)
+..+..+|-|.+|.+.+++-
T Consensus 6 ~~~~~~~~~CPrCn~~f~~~ 25 (49)
T 2e72_A 6 SGQDGGRKICPRCNAQFRVT 25 (49)
T ss_dssp SSCCSSCCCCTTTCCCCSSH
T ss_pred ccccCCceeCCcccccccch
Confidence 33445788888888777654
No 361
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=20.93 E-value=46 Score=32.65 Aligned_cols=45 Identities=18% Similarity=0.361 Sum_probs=31.1
Q ss_pred ccccccccccccccCCceEEe--CCCCcccHhhHHHHHhc----------CCCCCCcCcC
Q 017955 280 ETIVCAICKDTVNVGETATKL--PCGHVYHGDCIVPWLDS----------RNTCPVCRFE 327 (363)
Q Consensus 280 ~~~~C~ICle~f~~~e~~~~L--PC~H~Fh~~CI~~WLk~----------~~sCPlCR~~ 327 (363)
.+..|.||-+. ++.+..= .|...||..||+.++-. .=.|=+|.-.
T Consensus 92 ~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 92 YQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 45668888764 3344444 59999999999999732 1278888643
No 362
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=20.82 E-value=31 Score=33.05 Aligned_cols=30 Identities=30% Similarity=0.565 Sum_probs=20.9
Q ss_pred ceeeeecCC-cceeeeccCCCceecccCCCCce
Q 017955 23 QYWCHHCEK-RVSIETLANLPDVICHECKNGFV 54 (363)
Q Consensus 23 ~~~C~~C~~-~~~~~~~~~~~~~~c~~C~~gFv 54 (363)
++.|..|.. .-.+-.+...-++||..| |.|
T Consensus 21 ~~~Cp~C~~~~~~lv~D~~~G~~vC~~C--GlV 51 (345)
T 4bbr_M 21 VLTCPECKVYPPKIVERFSEGDVVCALC--GLV 51 (345)
T ss_dssp -CCCSSCCCSSCCEEEEGGGTEEEETTT--CBE
T ss_pred CCcCCCCCCCCCceeEECCCCcEEeCCC--CCC
Confidence 668999995 222334566789999999 665
No 363
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=20.81 E-value=31 Score=21.44 Aligned_cols=14 Identities=29% Similarity=0.658 Sum_probs=11.3
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-+.|+.|+..|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2em0_A 12 TWKCRECDMCFSQA 25 (46)
T ss_dssp CCCCSSSCCCCSSH
T ss_pred CeECCCCCcccCCH
Confidence 48899999998754
No 364
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=20.78 E-value=29 Score=19.36 Aligned_cols=13 Identities=31% Similarity=0.792 Sum_probs=9.9
Q ss_pred eecc--cCCCCceee
Q 017955 44 VICH--ECKNGFVES 56 (363)
Q Consensus 44 ~~c~--~C~~gFve~ 56 (363)
+.|+ .|+..|...
T Consensus 3 ~~C~~~~C~k~f~~~ 17 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRS 17 (31)
T ss_dssp CBCCSTTCCCBCSSH
T ss_pred cCCcCCCCCcccCCH
Confidence 6787 899988653
No 365
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.75 E-value=29 Score=21.63 Aligned_cols=15 Identities=20% Similarity=0.689 Sum_probs=11.4
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-|.|+.|+..|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2elz_A 11 KPYKCEDCGKGYNRR 25 (46)
T ss_dssp SSCBCSSSCCBCSSH
T ss_pred CCeeCcccCchhCCH
Confidence 348899999988653
No 366
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.67 E-value=29 Score=21.61 Aligned_cols=15 Identities=27% Similarity=0.651 Sum_probs=11.8
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2ytn_A 11 KPYKCNECGKVFTQN 25 (46)
T ss_dssp SSCBCTTTCCBCSSH
T ss_pred cCeECCCCCCeeCCH
Confidence 348899999998754
No 367
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.66 E-value=28 Score=21.59 Aligned_cols=15 Identities=27% Similarity=0.572 Sum_probs=11.8
Q ss_pred ceecccCCCCceeec
Q 017955 43 DVICHECKNGFVESI 57 (363)
Q Consensus 43 ~~~c~~C~~gFve~~ 57 (363)
-+.|+.|+..|...-
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2en8_A 12 SHTCDECGKNFCYIS 26 (46)
T ss_dssp SEECTTTCCEESSHH
T ss_pred CeECCCcCcccCCHH
Confidence 489999999997543
No 368
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.56 E-value=29 Score=21.51 Aligned_cols=14 Identities=29% Similarity=0.809 Sum_probs=11.1
Q ss_pred CceecccCCCCcee
Q 017955 42 PDVICHECKNGFVE 55 (363)
Q Consensus 42 ~~~~c~~C~~gFve 55 (363)
.-+.|+.|+..|..
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2emm_A 11 RPHKCNECGKSFIQ 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeeCCCCChhhCC
Confidence 34889999998864
No 369
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=20.55 E-value=33 Score=37.97 Aligned_cols=36 Identities=25% Similarity=0.657 Sum_probs=24.2
Q ss_pred CCceeeeecCCcce-----eeeccCCCceecccCCCCceee
Q 017955 21 PTQYWCHHCEKRVS-----IETLANLPDVICHECKNGFVES 56 (363)
Q Consensus 21 ~~~~~C~~C~~~~~-----~~~~~~~~~~~c~~C~~gFve~ 56 (363)
.++|.|-+|.-.-+ +..--+|||..||.|+.-.+-.
T Consensus 500 ~phy~c~~c~~~ef~~~~~~~~g~dlp~k~cp~cg~~~~~d 540 (1041)
T 3f2b_A 500 PPHYVCPNCKHSEFFNDGSVGSGFDLPDKNCPRCGTKYKKD 540 (1041)
T ss_dssp CSEEECTTTCCEEECCSSCCSCGGGSCCCBCTTTCCBCEEE
T ss_pred cccccCccccccccccccccccccCCccccCcccccccccc
Confidence 34799999994211 2233459999999998754443
No 370
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.49 E-value=33 Score=24.18 Aligned_cols=39 Identities=21% Similarity=0.537 Sum_probs=24.6
Q ss_pred ccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 282 IVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 282 ~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
..|..|-..+. +..+ ..-+..||..|. .|-.|+..|...
T Consensus 6 ~~C~~C~~~I~-~~~~--~a~~~~~H~~CF--------~C~~C~~~L~~~ 44 (70)
T 2d8x_A 6 SGCHQCGEFII-GRVI--KAMNNSWHPECF--------RCDLCQEVLADI 44 (70)
T ss_dssp SBCSSSCCBCC-SCCE--EETTEEECTTTS--------BCSSSCCBCSSS
T ss_pred CcCccCCCEec-ceEE--EECcccccccCC--------EeCCCCCcCCCC
Confidence 45888877765 2222 224667777775 577787777654
No 371
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.48 E-value=28 Score=21.58 Aligned_cols=15 Identities=27% Similarity=0.727 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytr_A 11 KPYKCNECGKAFSQT 25 (46)
T ss_dssp CTTCCTTTCCCCSSH
T ss_pred cCcCCCCCCCccCCH
Confidence 348899999998654
No 372
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.44 E-value=19 Score=22.41 Aligned_cols=15 Identities=20% Similarity=0.554 Sum_probs=11.6
Q ss_pred CceecccCCCCceee
Q 017955 42 PDVICHECKNGFVES 56 (363)
Q Consensus 42 ~~~~c~~C~~gFve~ 56 (363)
.-+.|+.|+..|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 11 KPYECNQCGKAFSVR 25 (46)
T ss_dssp CSSEETTTTEECSSH
T ss_pred CCeECCCCChhhCCH
Confidence 348899999988654
No 373
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=20.20 E-value=53 Score=26.21 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=22.8
Q ss_pred CCCCCceeeeecCCcceeeeccC---------CCc--------eecccCCCCce
Q 017955 18 DTDPTQYWCHHCEKRVSIETLAN---------LPD--------VICHECKNGFV 54 (363)
Q Consensus 18 ~~~~~~~~C~~C~~~~~~~~~~~---------~~~--------~~c~~C~~gFv 54 (363)
......|-|..|.+.|....... .+. +.|+.|+..|.
T Consensus 20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~ 73 (155)
T 2rpc_A 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73 (155)
T ss_dssp CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCS
T ss_pred chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccC
Confidence 34566788888888776542111 111 67888887774
No 374
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=20.17 E-value=43 Score=23.35 Aligned_cols=42 Identities=26% Similarity=0.689 Sum_probs=28.7
Q ss_pred cccccccccccccCCceEEeCCCCcccHhhHHHHHhcCCCCCCcCcCCCCC
Q 017955 281 TIVCAICKDTVNVGETATKLPCGHVYHGDCIVPWLDSRNTCPVCRFELPTD 331 (363)
Q Consensus 281 ~~~C~ICle~f~~~e~~~~LPC~H~Fh~~CI~~WLk~~~sCPlCR~~l~~~ 331 (363)
...|..|...+...+.++. .=+..||..|. .|-.|.+.|...
T Consensus 11 ~~~C~~C~~~i~~~e~~~~-~~~~~~H~~CF--------~C~~C~~~L~~~ 52 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVN-SNGELYHEQCF--------VCAQCFQQFPEG 52 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEE-ETTEEEETTTS--------SCTTTCCCCGGG
T ss_pred CccchhcCccccCCceEEE-eCcCeeCcCCC--------cccCCCCCCCCC
Confidence 4579999888775544332 24667888886 588888877543
No 375
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.05 E-value=22 Score=22.26 Aligned_cols=14 Identities=36% Similarity=0.683 Sum_probs=11.1
Q ss_pred ceecccCCCCceee
Q 017955 43 DVICHECKNGFVES 56 (363)
Q Consensus 43 ~~~c~~C~~gFve~ 56 (363)
-|.|+.|+..|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eoz_A 12 PYSCNVCGKAFVLS 25 (46)
T ss_dssp SEEETTTTEEESSH
T ss_pred CeECcccChhhCCH
Confidence 48899999988653
Done!