Your job contains 1 sequence.
>017961
MDEKRSNCEKVEEEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRS
LLHSSISSTNNLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPI
NVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLYQAWLL
FLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFL
QWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGF
EAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAKMKKSKSK
PEF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017961
(363 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127701 - symbol:AT4G10430 "AT4G10430" species... 1167 1.6e-118 1
TAIR|locus:2196668 - symbol:AT1G33230 "AT1G33230" species... 1145 3.4e-116 1
DICTYBASE|DDB_G0288699 - symbol:tmem120 "TMPIT-like famil... 321 7.1e-29 1
UNIPROTKB|Q05B45 - symbol:TMEM120A "Transmembrane protein... 280 1.6e-24 1
MGI|MGI:2686991 - symbol:Tmem120a "transmembrane protein ... 280 1.6e-24 1
RGD|1311474 - symbol:Tmem120a "transmembrane protein 120A... 280 1.6e-24 1
UNIPROTKB|F1P7N5 - symbol:F1P7N5 "Uncharacterized protein... 278 2.6e-24 1
UNIPROTKB|Q9BXJ8 - symbol:TMEM120A "Transmembrane protein... 278 2.6e-24 1
ZFIN|ZDB-GENE-041010-17 - symbol:zgc:103681 "zgc:103681" ... 258 3.4e-22 1
ZFIN|ZDB-GENE-070424-21 - symbol:tmem120a "transmembrane ... 254 9.0e-22 1
UNIPROTKB|F1P5H9 - symbol:TMEM120A "Uncharacterized prote... 253 1.1e-21 1
UNIPROTKB|F1RNQ3 - symbol:TMEM120B "Uncharacterized prote... 252 1.5e-21 1
ZFIN|ZDB-GENE-050522-49 - symbol:tmem120b "transmembrane ... 246 6.3e-21 1
UNIPROTKB|F1PIR9 - symbol:TMEM120B "Uncharacterized prote... 244 1.0e-20 1
UNIPROTKB|A6QPF8 - symbol:TMEM120B "Transmembrane protein... 243 1.3e-20 1
UNIPROTKB|J9NV54 - symbol:TMEM120B "Uncharacterized prote... 241 2.1e-20 1
UNIPROTKB|A0PK00 - symbol:TMEM120B "Transmembrane protein... 241 2.1e-20 1
RGD|1583095 - symbol:LOC687611 "similar to transmembrane ... 239 3.5e-20 1
MGI|MGI:3603158 - symbol:Tmem120b "transmembrane protein ... 238 4.4e-20 1
UNIPROTKB|F1NZ36 - symbol:TMEM120B "Uncharacterized prote... 235 1.4e-19 1
WB|WBGene00019716 - symbol:M01G5.3 species:6239 "Caenorha... 225 2.5e-18 1
FB|FBgn0040384 - symbol:CG32795 species:7227 "Drosophila ... 203 4.5e-18 2
UNIPROTKB|I3LEI2 - symbol:I3LEI2 "Uncharacterized protein... 206 2.1e-15 1
UNIPROTKB|H0YG77 - symbol:TMEM120B "Transmembrane protein... 192 3.7e-15 1
>TAIR|locus:2127701 [details] [associations]
symbol:AT4G10430 "AT4G10430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR PANTHER:PTHR21433 OMA:LPECKEW
EMBL:AY059867 EMBL:AY093326 IPI:IPI00527024 RefSeq:NP_567356.1
RefSeq:NP_974529.1 UniGene:At.3020 IntAct:Q93XX0 PRIDE:Q93XX0
EnsemblPlants:AT4G10430.1 EnsemblPlants:AT4G10430.3 GeneID:826635
KEGG:ath:AT4G10430 TAIR:At4g10430 HOGENOM:HOG000264974
InParanoid:Q93XX0 PhylomeDB:Q93XX0 ProtClustDB:CLSN2688233
Genevestigator:Q93XX0 Uniprot:Q93XX0
Length = 347
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 225/320 (70%), Positives = 252/320 (78%)
Query: 26 LQEAAATLINRTSSEEQSLRQRALSLDXXXXXXXXXXXXXXXXXXXXXRFDSKLADKQLE 85
L ++AA+ I+ +S +E SLRQ+A ++D D KL +K LE
Sbjct: 17 LHDSAASFISSSSQQELSLRQKASAVDSSIRRLHSTIVSNK-------NLDPKLVEK-LE 68
Query: 86 EDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRTA 145
EDL +A+C++ DG+ S+FLPSK QG FV+MF GP+NVRA RKDVQLKVKEEYN YRD+TA
Sbjct: 69 EDLHRARCMLVDGETSSFLPSKPQGRFVRMFCGPVNVRALRKDVQLKVKEEYNRYRDKTA 128
Query: 146 XXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWI 205
RS+ W GCLPAFPVQLY+AWLLFLY GLA+RENILR NGSDIRPWW+
Sbjct: 129 LLFLFFPATLLILRSYYWGGCLPAFPVQLYEAWLLFLYAGLAMRENILRANGSDIRPWWL 188
Query: 206 YHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRI 265
YHHYCAM MALVSLTWEIKGQPNC QKQRGV LFLQWAMMQGVAMLLQNRYQRQRLYTRI
Sbjct: 189 YHHYCAMAMALVSLTWEIKGQPNCVQKQRGVHLFLQWAMMQGVAMLLQNRYQRQRLYTRI 248
Query: 266 ALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFC 325
ALGKAKRMDVVWGETAGVDGQLWLLCPILFILQ FEAYVGLLLL+ + GVV EWQV C
Sbjct: 249 ALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRKTVTGVVNEWQVMVC 308
Query: 326 GALLVLMAVGNFINTVQTLM 345
G LLV+MAVGNFINTV+TLM
Sbjct: 309 GILLVVMAVGNFINTVETLM 328
>TAIR|locus:2196668 [details] [associations]
symbol:AT1G33230 "AT1G33230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR012926 Pfam:PF07851
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:NOG329433 PANTHER:PTHR21433 OMA:FSIYQSC HOGENOM:HOG000264974
ProtClustDB:CLSN2688233 EMBL:AY056228 EMBL:AY114084 EMBL:AY088658
EMBL:BT000709 IPI:IPI00527630 RefSeq:NP_564420.1 UniGene:At.25742
IntAct:Q93ZW4 PaxDb:Q93ZW4 PRIDE:Q93ZW4 EnsemblPlants:AT1G33230.1
GeneID:840217 KEGG:ath:AT1G33230 TAIR:At1g33230 InParanoid:Q93ZW4
PhylomeDB:Q93ZW4 ArrayExpress:Q93ZW4 Genevestigator:Q93ZW4
Uniprot:Q93ZW4
Length = 347
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 221/320 (69%), Positives = 251/320 (78%)
Query: 26 LQEAAATLINRTSSEEQSLRQRALSLDXXXXXXXXXXXXXXXXXXXXXRFDSKLADKQLE 85
L +++ + ++ +S EE SLR RA +D D KL +K LE
Sbjct: 18 LHDSSTSFVSSSSQEELSLRNRASVVDSSIRRLHSTLASDK-------HLDPKLFEK-LE 69
Query: 86 EDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRTA 145
EDLQ+A+C++ DGD S+FLPSK QG FV+MF+GP+NVRASRKD+QLKVKEEYNSYRDRTA
Sbjct: 70 EDLQRARCMLADGDTSSFLPSKPQGRFVRMFLGPVNVRASRKDIQLKVKEEYNSYRDRTA 129
Query: 146 XXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWI 205
RS++WDGCLPAFPVQLYQAWLLFLY GL +RENILR NGSDIR WW+
Sbjct: 130 LLFLVFPAILLTLRSYVWDGCLPAFPVQLYQAWLLFLYAGLVMRENILRANGSDIRSWWL 189
Query: 206 YHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRI 265
YHHY AM M+LVSLTWEIKGQPNC QKQ+GV+LFLQWAMMQGVAMLLQNRYQRQRLYTRI
Sbjct: 190 YHHYFAMAMSLVSLTWEIKGQPNCVQKQKGVRLFLQWAMMQGVAMLLQNRYQRQRLYTRI 249
Query: 266 ALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFC 325
ALGKAKRMDVVWGETAGVDGQL LL PILF LQGFEAYVG LL+T L+GVV EWQV C
Sbjct: 250 ALGKAKRMDVVWGETAGVDGQLLLLFPILFTLQGFEAYVGFQLLRTVLMGVVAEWQVLVC 309
Query: 326 GALLVLMAVGNFINTVQTLM 345
G LLV+MA+GNFINTV+TLM
Sbjct: 310 GILLVVMAIGNFINTVETLM 329
>DICTYBASE|DDB_G0288699 [details] [associations]
symbol:tmem120 "TMPIT-like family protein"
species:44689 "Dictyostelium discoideum" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR012926
Pfam:PF07851 dictyBase:DDB_G0288699 GO:GO:0016021
GenomeReviews:CM000154_GR EMBL:AAFI02000120 eggNOG:NOG329433
PANTHER:PTHR21433 RefSeq:XP_636584.1 EnsemblProtists:DDB0266365
GeneID:8626757 KEGG:ddi:DDB_G0288699 OMA:THEVQIS
ProtClustDB:CLSZ2728829 Uniprot:Q54IK2
Length = 368
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 84/267 (31%), Positives = 129/267 (48%)
Query: 82 KQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR 141
K+L L + + + S F P FV++F+G +NV+ R++ + ++K+EY ++
Sbjct: 100 KELSAHLDQIKVNVKRAKVS-FTPETGS-IFVRLFLGQVNVKHMRENEKFRLKQEYEKFK 157
Query: 142 DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIR 201
+T +F +Q WLL+ Y LALRENIL +NGS I+
Sbjct: 158 KKTNPQFILFVVLLLLYPQ-------SSFVTTSWQIWLLYYYITLALRENILLVNGSSIK 210
Query: 202 PWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRL 261
PWWI HHY ++ +L +L + + + Q V F + QG+ +L NRYQ+ RL
Sbjct: 211 PWWIMHHYLSIAGSLTNLLFPLSESFSYFLPQ--VTYF---SGCQGLVQILTNRYQQGRL 265
Query: 262 YTRIALGKAKRMDVV-----WGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALV-- 314
Y +A+GKA +DV WG G L P L +Q F+ Y A
Sbjct: 266 YKLVAMGKANIIDVTGESEGWGNDPGWTPSALFLFPFLLFVQFFQLYNSFSFFAFAYQRS 325
Query: 315 GVVPEWQVSFCGALLVLMAVGNFINTV 341
G V EWQV CG + + + +GN + T+
Sbjct: 326 GYV-EWQVFSCGFIFLCLGLGNLLTTL 351
>UNIPROTKB|Q05B45 [details] [associations]
symbol:TMEM120A "Transmembrane protein 120A" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021 EMBL:BC122849
IPI:IPI00712220 RefSeq:NP_001073068.1 UniGene:Bt.4011 PRIDE:Q05B45
Ensembl:ENSBTAT00000021482 GeneID:520173 KEGG:bta:520173 CTD:83862
eggNOG:NOG329433 GeneTree:ENSGT00390000007848 HOGENOM:HOG000267032
HOVERGEN:HBG108532 InParanoid:Q05B45 OMA:QDGISSC OrthoDB:EOG4QJRNS
NextBio:20873041 PANTHER:PTHR21433 Uniprot:Q05B45
Length = 343
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 82/271 (30%), Positives = 128/271 (47%)
Query: 76 DSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKE 135
+++ A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+
Sbjct: 75 EAEEAARELENQIKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKD 131
Query: 136 EYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILR 194
EY ++ T S + D AF L W Y L +RE+IL
Sbjct: 132 EYEKFKLYLTIILILISFTCRFLLNSRVTDA---AFNFLL--VWY---YCTLTIRESILI 183
Query: 195 INGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQN 254
NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ
Sbjct: 184 NNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQY 238
Query: 255 RYQRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAL 313
YQ LY ALG+ MD+ V G + + L L P LF ++ + L L A
Sbjct: 239 YYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAR 298
Query: 314 VGVVPEWQVSFCGALLVLMAVGNFINTVQTL 344
EWQV CG +L+ +GNF T++ +
Sbjct: 299 DPECKEWQVLMCGFPFLLLFLGNFFTTLRVV 329
>MGI|MGI:2686991 [details] [associations]
symbol:Tmem120a "transmembrane protein 120A" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 MGI:MGI:2686991 GO:GO:0016021
CTD:83862 eggNOG:NOG329433 GeneTree:ENSGT00390000007848
HOGENOM:HOG000267032 HOVERGEN:HBG108532 OrthoDB:EOG4QJRNS
PANTHER:PTHR21433 OMA:LPECKEW EMBL:AK028119 EMBL:AK050367
EMBL:BC046757 IPI:IPI00224209 RefSeq:NP_766129.1 UniGene:Mm.11688
PaxDb:Q8C1E7 PRIDE:Q8C1E7 Ensembl:ENSMUST00000043378 GeneID:215210
KEGG:mmu:215210 UCSC:uc008zyu.1 InParanoid:Q8C1E7 NextBio:374644
Bgee:Q8C1E7 CleanEx:MM_TMEM120A Genevestigator:Q8C1E7
Uniprot:Q8C1E7
Length = 343
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 83/271 (30%), Positives = 127/271 (46%)
Query: 76 DSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKE 135
+S A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+
Sbjct: 75 ESMEAAQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKD 131
Query: 136 EYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILR 194
EY ++ T S + D AF L W Y L +RE+IL
Sbjct: 132 EYEKFKLYLTIILIVISFTCRFLLNSRVTDA---AFNFLL--VWY---YCTLTIRESILI 183
Query: 195 INGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQN 254
NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ
Sbjct: 184 NNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQY 238
Query: 255 RYQRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAL 313
YQ LY ALG+ MD+ V G + + L L P LF ++ + L L A
Sbjct: 239 YYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAR 298
Query: 314 VGVVPEWQVSFCGALLVLMAVGNFINTVQTL 344
EWQV CG +L+ +GNF T++ +
Sbjct: 299 DPECKEWQVLMCGFPFLLLFLGNFFTTLRVV 329
>RGD|1311474 [details] [associations]
symbol:Tmem120a "transmembrane protein 120A" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR012926 Pfam:PF07851 RGD:1311474
GO:GO:0016021 CTD:83862 eggNOG:NOG329433
GeneTree:ENSGT00390000007848 HOGENOM:HOG000267032
HOVERGEN:HBG108532 OrthoDB:EOG4QJRNS PANTHER:PTHR21433 OMA:LPECKEW
EMBL:BC089063 IPI:IPI00194688 RefSeq:NP_001010945.1 UniGene:Rn.6288
PRIDE:Q5HZE2 Ensembl:ENSRNOT00000001960 GeneID:288591
KEGG:rno:288591 UCSC:RGD:1311474 InParanoid:Q5HZE2 NextBio:628375
Genevestigator:Q5HZE2 Uniprot:Q5HZE2
Length = 343
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 83/271 (30%), Positives = 127/271 (46%)
Query: 76 DSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKE 135
+S A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+
Sbjct: 75 ESLEAAQELESQIKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKD 131
Query: 136 EYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILR 194
EY ++ T S + D AF L W Y L +RE+IL
Sbjct: 132 EYEKFKLYLTIILIVISFTCRFLLNSRVTDA---AFNFLL--VWY---YCTLTIRESILI 183
Query: 195 INGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQN 254
NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ
Sbjct: 184 NNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQY 238
Query: 255 RYQRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAL 313
YQ LY ALG+ MD+ V G + + L L P LF ++ + L L A
Sbjct: 239 YYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAR 298
Query: 314 VGVVPEWQVSFCGALLVLMAVGNFINTVQTL 344
EWQV CG +L+ +GNF T++ +
Sbjct: 299 DPECKEWQVLMCGLPFLLLFLGNFFTTLRVV 329
>UNIPROTKB|F1P7N5 [details] [associations]
symbol:F1P7N5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
GeneTree:ENSGT00390000007848 PANTHER:PTHR21433 EMBL:AAEX03004248
Ensembl:ENSCAFT00000021384 OMA:NEWDELN Uniprot:F1P7N5
Length = 408
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 82/267 (30%), Positives = 125/267 (46%)
Query: 80 ADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNS 139
A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY
Sbjct: 144 AAQELENQIKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEK 200
Query: 140 YR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGS 198
++ T S + D AF L W Y L +RE+IL NGS
Sbjct: 201 FKLYLTIILILISFTCRFLLNSRVTDA---AFNFLL--VWY---YCTLTIRESILINNGS 252
Query: 199 DIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQR 258
I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ YQ
Sbjct: 253 RIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQS 307
Query: 259 QRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVV 317
LY ALG+ MD+ V G + + L L P LF ++ + L L A
Sbjct: 308 GCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLARDPEC 367
Query: 318 PEWQVSFCGALLVLMAVGNFINTVQTL 344
EWQV CG +L+ +GNF T++ +
Sbjct: 368 KEWQVLMCGFPFLLLFLGNFFTTLRVV 394
>UNIPROTKB|Q9BXJ8 [details] [associations]
symbol:TMEM120A "Transmembrane protein 120A" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
EMBL:CH471066 CTD:83862 eggNOG:NOG329433 HOVERGEN:HBG108532
PANTHER:PTHR21433 EMBL:AF327923 EMBL:BC029487 EMBL:BC051850
IPI:IPI00470533 IPI:IPI00871302 RefSeq:NP_114131.1
UniGene:Hs.488835 ProteinModelPortal:Q9BXJ8 IntAct:Q9BXJ8
MINT:MINT-1416635 DMDM:74717620 PRIDE:Q9BXJ8 DNASU:83862
GeneID:83862 KEGG:hsa:83862 UCSC:uc003uec.2 GeneCards:GC07M075618
HGNC:HGNC:21697 neXtProt:NX_Q9BXJ8 PharmGKB:PA162405861
InParanoid:Q9BXJ8 ChiTaRS:TMEM120A GenomeRNAi:83862 NextBio:72873
CleanEx:HS_TMEM120A Genevestigator:Q9BXJ8 Uniprot:Q9BXJ8
Length = 343
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 82/267 (30%), Positives = 125/267 (46%)
Query: 80 ADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNS 139
A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY
Sbjct: 79 AAQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEK 135
Query: 140 YR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGS 198
++ T S + D AF L W Y L +RE+IL NGS
Sbjct: 136 FKLYLTIILILISFTCRFLLNSRVTDA---AFNFLL--VWY---YCTLTIRESILINNGS 187
Query: 199 DIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQR 258
I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ YQ
Sbjct: 188 RIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQS 242
Query: 259 QRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVV 317
LY ALG+ MD+ V G + + L L P LF ++ + L L A
Sbjct: 243 GCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAQDPQC 302
Query: 318 PEWQVSFCGALLVLMAVGNFINTVQTL 344
EWQV CG +L+ +GNF T++ +
Sbjct: 303 KEWQVLMCGFPFLLLFLGNFFTTLRVV 329
>ZFIN|ZDB-GENE-041010-17 [details] [associations]
symbol:zgc:103681 "zgc:103681" species:7955 "Danio
rerio" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 ZFIN:ZDB-GENE-041010-17
GO:GO:0016021 HOVERGEN:HBG108532 PANTHER:PTHR21433 EMBL:BC083460
IPI:IPI00637363 RefSeq:NP_001005946.1 UniGene:Dr.91458
GeneID:449773 KEGG:dre:449773 InParanoid:Q5XJ49 NextBio:20832849
Uniprot:Q5XJ49
Length = 337
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 76/263 (28%), Positives = 123/263 (46%)
Query: 80 ADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNS 139
A K+ ++ ++ I+ +A FLP K G ++ + +G +NV KD + + K+EY
Sbjct: 75 AVKEAKDHIRNMPSQIFQMEA--FLPKK-NGIYLSLVLGSVNVNLPSKDAKAEYKDEYER 131
Query: 140 YRDRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSD 199
++ ++ + L A L L++ Y L +RE+IL NGS
Sbjct: 132 FKLYVTVTHFLLTFICCFFVNYRF---LDA----LLNFLLVWYYCTLTIRESILISNGSR 184
Query: 200 IRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQ 259
I+ WW++HHY + ++ V LTW P+ Q FL + + Q LQ YQ
Sbjct: 185 IKGWWVFHHYISTFLSGVMLTW-----PDGETYQSFRTQFLAYCLYQSFVQYLQYYYQSG 239
Query: 260 RLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVP 318
LY ALG+ +D+ V G + + L L P LF+ ++ G L + A +
Sbjct: 240 CLYRLKALGERHNLDLTVEGFQSWMWRGLTYLLPFLFLGHFWQFCNGFSLFRLARLPECR 299
Query: 319 EWQVSFCGALLVLMAVGNFINTV 341
EWQVS CG +++ GNF T+
Sbjct: 300 EWQVSMCGFCFMVLFAGNFFTTL 322
>ZFIN|ZDB-GENE-070424-21 [details] [associations]
symbol:tmem120a "transmembrane protein 120A"
species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR012926 Pfam:PF07851
ZFIN:ZDB-GENE-070424-21 GO:GO:0016021 CTD:83862 eggNOG:NOG329433
GeneTree:ENSGT00390000007848 HOGENOM:HOG000267032
HOVERGEN:HBG108532 OrthoDB:EOG4QJRNS PANTHER:PTHR21433
EMBL:BC133884 IPI:IPI00844900 RefSeq:NP_001076452.1
UniGene:Dr.90037 Ensembl:ENSDART00000048831 GeneID:100005623
KEGG:dre:100005623 InParanoid:A3KNK1 OMA:LPECKEW NextBio:20786769
Bgee:A3KNK1 Uniprot:A3KNK1
Length = 341
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 74/266 (27%), Positives = 125/266 (46%)
Query: 77 SKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEE 136
+K+ D ++E +++ + ++ +A FLP K G ++ + +G +NV K + K+E
Sbjct: 77 NKIDD--IQESIKERPNVFFEMEA--FLPKK-NGLYLSLVLGNVNVTLLNKQSKFAYKDE 131
Query: 137 YNSYRDRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRIN 196
Y ++ R + + A L+ L++ Y L +RE+IL N
Sbjct: 132 YEKFK---LYLTVLLLFFSFTCRFLVSYRVVDA----LFNFLLVWYYCTLTIRESILINN 184
Query: 197 GSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRY 256
GS I+ WW++ HY + ++ V LTW P+ Q FL ++M Q Y
Sbjct: 185 GSKIKGWWVFQHYVSTFLSGVMLTW-----PDGELYQMFRNQFLSYSMYINFVQFFQYYY 239
Query: 257 QRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVG 315
Q LY ALG+ MD+ V G + + L L P LF+ F+ Y G+ L + +
Sbjct: 240 QSGCLYRLRALGERHNMDLTVEGFQSWMWRGLTFLLPFLFLGHFFQLYNGITLFQMTQLP 299
Query: 316 VVPEWQVSFCGALLVLMAVGNFINTV 341
EWQV CG+ +++ +GNF T+
Sbjct: 300 EWKEWQVLMCGSTFLVLFMGNFFTTL 325
>UNIPROTKB|F1P5H9 [details] [associations]
symbol:TMEM120A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
GeneTree:ENSGT00390000007848 OMA:QDGISSC PANTHER:PTHR21433
EMBL:AADN02025955 IPI:IPI00595816 Ensembl:ENSGALT00000003069
Uniprot:F1P5H9
Length = 344
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 78/266 (29%), Positives = 120/266 (45%)
Query: 86 EDLQKAQCLIYDG-----DASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSY 140
+ +Q+ Q LI + + A+LP K G ++ + +G +NV K + K+EY +
Sbjct: 79 DSVQEIQSLIKERQNVFFEMEAYLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKF 137
Query: 141 R-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSD 199
+ T S + D AF L W Y L +RE+IL NGS
Sbjct: 138 KLYLTIILLIVSFSCRFLLNSRVTDS---AFNFLL--VWY---YCTLTIRESILINNGSK 189
Query: 200 IRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQ 259
I+ WW++HH+ + ++ V LTW P+ Q FL ++M Q LQ YQ
Sbjct: 190 IKGWWVFHHHISTFLSGVMLTW-----PDGLMYQMFRNQFLSFSMYQSFVQFLQYYYQSG 244
Query: 260 RLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVP 318
LY ALG+ MD+ V G + + L L P LF Q ++ Y + L +
Sbjct: 245 CLYRLRALGERHNMDLTVEGFQSWMWRGLTFLLPFLFFGQFWQLYNAVTLFRMLQHPECK 304
Query: 319 EWQVSFCGALLVLMAVGNFINTVQTL 344
EWQV CG ++ +GNF T++ +
Sbjct: 305 EWQVLMCGLPFFVLFLGNFFTTLRVV 330
>UNIPROTKB|F1RNQ3 [details] [associations]
symbol:TMEM120B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
GeneTree:ENSGT00390000007848 PANTHER:PTHR21433 EMBL:CU467994
RefSeq:XP_003132924.1 UniGene:Ssc.89992 Ensembl:ENSSSCT00000010751
GeneID:100525612 KEGG:ssc:100525612 OMA:FSIYQSC Uniprot:F1RNQ3
Length = 339
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 73/267 (27%), Positives = 126/267 (47%)
Query: 82 KQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR 141
+QL ++++ Q + +D +A +LP K G ++ + +G +NV K + K+EY ++
Sbjct: 77 QQLGANIKERQNVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSKQAKFAYKDEYEKFK 133
Query: 142 -DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDI 200
T + D +++ L++ Y L +RE+IL NGS I
Sbjct: 134 LYLTIILLLGAVACRFVLHYRVTD--------EIFNFLLVWYYCTLTIRESILISNGSRI 185
Query: 201 RPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQR 260
+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q LQ YQR
Sbjct: 186 KGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC 240
Query: 261 LYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPE 319
LY ALG+ +D+ V G + + L L P LF ++ Y + L + + E
Sbjct: 241 LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECKE 300
Query: 320 WQVSFCGALLVLMAVGNFINTVQTLMT 346
WQV +++ +GNF+ T++ + T
Sbjct: 301 WQVFVLALTFLILFLGNFLTTLKVVHT 327
>ZFIN|ZDB-GENE-050522-49 [details] [associations]
symbol:tmem120b "transmembrane protein 120B"
species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR012926 Pfam:PF07851
ZFIN:ZDB-GENE-050522-49 GO:GO:0016021 EMBL:BX088560
eggNOG:NOG329433 GeneTree:ENSGT00390000007848 HOGENOM:HOG000267032
HOVERGEN:HBG108532 OrthoDB:EOG4QJRNS PANTHER:PTHR21433
EMBL:BC095336 IPI:IPI00636398 UniGene:Dr.83342
Ensembl:ENSDART00000126248 InParanoid:Q503G6 Bgee:Q1LY80
Uniprot:Q1LY80
Length = 337
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 71/271 (26%), Positives = 127/271 (46%)
Query: 76 DSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKE 135
DS++ + L+ +++ Q + +D +A +LP K G ++ + +G +NV + K+
Sbjct: 70 DSEVIN-DLQVQIKERQNVFFDMEA--YLP-KRNGLYLNLVLGNVNVTLLSNQAKFAYKD 125
Query: 136 EYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILR 194
EY ++ T + D +++ L++ Y L +RE+ILR
Sbjct: 126 EYEKFKLYMTIILMFGAVTCLFLLNYRVTD--------EIFNFLLVWYYCTLTIRESILR 177
Query: 195 INGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQN 254
NGS I+ WW+ HHY + ++ V LTW P Q FL +++ Q LQ
Sbjct: 178 SNGSRIKGWWVSHHYVSTFLSGVMLTW-----PEGPMYQMFRSQFLAFSIYQSCVQFLQY 232
Query: 255 RYQRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAL 313
YQ LY ALG+ ++D+ V G + + L L P LF ++ Y + L + +
Sbjct: 233 YYQSGCLYRLRALGERNQLDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLYNAVTLFRLSA 292
Query: 314 VGVVPEWQVSFCGALLVLMAVGNFINTVQTL 344
+ EWQV +++ +GNF+ T++ +
Sbjct: 293 LDDCKEWQVFMLALTFLVLFLGNFLTTLKVV 323
>UNIPROTKB|F1PIR9 [details] [associations]
symbol:TMEM120B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
GeneTree:ENSGT00390000007848 PANTHER:PTHR21433 OMA:HKECKEW
EMBL:AAEX03014658 Ensembl:ENSCAFT00000013058 Uniprot:F1PIR9
Length = 340
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 81/322 (25%), Positives = 142/322 (44%)
Query: 26 LQEAAATLINRTSSEEQSL-RQRALSLDXXXXXXXXXXXXXXXXXXXXXRFDSKLADKQL 84
LQ I ++ E SL R R+ S++ R +++L +Q+
Sbjct: 22 LQHEQRITIQKSLFEFASLERLRSGSINKQKTRLKDLKHTLQRYKSHASREEAELI-QQM 80
Query: 85 EEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR-DR 143
+++ Q + +D +A +LP K G ++ + +G +NV + K+EY ++
Sbjct: 81 SANIKDRQNIFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAKFAYKDEYEKFKLYL 137
Query: 144 TAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPW 203
T + D +++ L++ Y L +RE+IL NGS I+ W
Sbjct: 138 TIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIRESILISNGSRIKGW 189
Query: 204 WIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYT 263
W+ HHY + ++ V LTW PN Q+ FL +++ Q LQ YQR LY
Sbjct: 190 WVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQSCVQFLQYYYQRGCLYR 244
Query: 264 RIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPEWQV 322
ALG+ +D+ V G + + L L P LF ++ Y + L + + EWQV
Sbjct: 245 LRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAITLFELSSHEECREWQV 304
Query: 323 SFCGALLVLMAVGNFINTVQTL 344
+++ +GNF+ T++ +
Sbjct: 305 FVLALTFLVLFLGNFLTTLKVV 326
>UNIPROTKB|A6QPF8 [details] [associations]
symbol:TMEM120B "Transmembrane protein 120B" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021 eggNOG:NOG329433
GeneTree:ENSGT00390000007848 HOGENOM:HOG000267032
HOVERGEN:HBG108532 OrthoDB:EOG4QJRNS PANTHER:PTHR21433
EMBL:BC149295 IPI:IPI00866955 RefSeq:NP_001095378.1
UniGene:Bt.64591 PRIDE:A6QPF8 Ensembl:ENSBTAT00000012636
GeneID:508790 KEGG:bta:508790 CTD:144404 InParanoid:A6QPF8
OMA:HKECKEW NextBio:20868682 Uniprot:A6QPF8
Length = 339
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 73/275 (26%), Positives = 130/275 (47%)
Query: 74 RFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKV 133
R +++L +Q+ ++++ Q + +D +A +LP K G ++ + +G +NV +
Sbjct: 70 REEAELV-QQMGANIKERQNVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAKFAY 125
Query: 134 KEEYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENI 192
K+EY ++ T + D +++ L++ Y L +RE+I
Sbjct: 126 KDEYEKFKLYLTIILLLGAVACRFFLHYRVTD--------EVFNFLLVWYYCTLTIRESI 177
Query: 193 LRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLL 252
L NGS I+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q L
Sbjct: 178 LISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQSCVQFL 232
Query: 253 QNRYQRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKT 311
Q YQR LY ALG+ +D+ V G + + L L P LF ++ Y + L +
Sbjct: 233 QYYYQRGCLYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFEL 292
Query: 312 ALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMT 346
+ EWQV +++ +GNF+ T++ + T
Sbjct: 293 SSHEECREWQVFVLALTFLVLFLGNFLTTLKVVHT 327
>UNIPROTKB|J9NV54 [details] [associations]
symbol:TMEM120B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
GeneTree:ENSGT00390000007848 PANTHER:PTHR21433 CTD:144404
EMBL:AAEX03014658 RefSeq:XP_543384.3 Ensembl:ENSCAFT00000045436
GeneID:486259 KEGG:cfa:486259 Uniprot:J9NV54
Length = 339
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 70/265 (26%), Positives = 123/265 (46%)
Query: 82 KQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR 141
+Q+ +++ Q + +D +A +LP K G ++ + +G +NV + K+EY ++
Sbjct: 77 QQMSANIKDRQNIFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAKFAYKDEYEKFK 133
Query: 142 -DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDI 200
T + D +++ L++ Y L +RE+IL NGS I
Sbjct: 134 LYLTIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIRESILISNGSRI 185
Query: 201 RPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQR 260
+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q LQ YQR
Sbjct: 186 KGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC 240
Query: 261 LYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPE 319
LY ALG+ +D+ V G + + L L P LF ++ Y + L + + E
Sbjct: 241 LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAITLFELSSHEECRE 300
Query: 320 WQVSFCGALLVLMAVGNFINTVQTL 344
WQV +++ +GNF+ T++ +
Sbjct: 301 WQVFVLALTFLVLFLGNFLTTLKVV 325
>UNIPROTKB|A0PK00 [details] [associations]
symbol:TMEM120B "Transmembrane protein 120B" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
UniGene:Hs.644504 eggNOG:NOG329433 HOGENOM:HOG000267032
HOVERGEN:HBG108532 OrthoDB:EOG4QJRNS PANTHER:PTHR21433 CTD:144404
OMA:HKECKEW EMBL:AK126568 EMBL:BC127768 EMBL:BC127769
IPI:IPI00815976 RefSeq:NP_001074294.2 ProteinModelPortal:A0PK00
PhosphoSite:A0PK00 PRIDE:A0PK00 Ensembl:ENST00000342607
Ensembl:ENST00000449592 GeneID:144404 KEGG:hsa:144404
UCSC:uc001ubc.4 GeneCards:GC12P122150 HGNC:HGNC:32008 HPA:HPA014066
neXtProt:NX_A0PK00 PharmGKB:PA162405862 InParanoid:A0PK00
ChiTaRS:TMEM120B GenomeRNAi:144404 NextBio:84906
ArrayExpress:A0PK00 Bgee:A0PK00 Genevestigator:A0PK00
Uniprot:A0PK00
Length = 339
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 72/273 (26%), Positives = 129/273 (47%)
Query: 74 RFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKV 133
R +++L +Q+ ++++ Q + +D +A +LP K G ++ + +G +NV +
Sbjct: 70 REEAELV-QQMAANIKERQDVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAKFAY 125
Query: 134 KEEYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENI 192
K+EY ++ T + D +++ L++ Y L +RE+I
Sbjct: 126 KDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIRESI 177
Query: 193 LRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLL 252
L NGS I+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q L
Sbjct: 178 LISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGPIYQKFRNQFLAFSIFQSCVQFL 232
Query: 253 QNRYQRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKT 311
Q YQR LY ALG+ +D+ V G + + L L P LF ++ Y + L +
Sbjct: 233 QYYYQRGCLYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFEL 292
Query: 312 ALVGVVPEWQVSFCGALLVLMAVGNFINTVQTL 344
+ EWQV +++ +GNF+ T++ +
Sbjct: 293 SSHEECREWQVFVLAFTFLILFLGNFLTTLKVV 325
>RGD|1583095 [details] [associations]
symbol:LOC687611 "similar to transmembrane protein induced by
tumor necrosis factor alpha" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_001079386 Ncbi:XP_001079386
Length = 339
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 70/265 (26%), Positives = 124/265 (46%)
Query: 82 KQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR 141
+QL ++++ Q + +D +A +LP K G ++ + +G ++V + K+EY ++
Sbjct: 77 QQLAANIKERQNVFFDMEA--YLPKK-NGLYLNLVLGNVDVTLLSNQAKFAYKDEYEKFK 133
Query: 142 -DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDI 200
T + D +++ L++ Y L +RE+IL NGS I
Sbjct: 134 LYLTIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIRESILISNGSRI 185
Query: 201 RPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQR 260
+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q LQ YQR
Sbjct: 186 KGWWVSHHYVSSFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC 240
Query: 261 LYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPE 319
LY ALG+ +D+ V G + + L L P LF ++ Y + L + + E
Sbjct: 241 LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECKE 300
Query: 320 WQVSFCGALLVLMAVGNFINTVQTL 344
WQV +++ +GNF+ T++ +
Sbjct: 301 WQVFVLALTFLILFLGNFLTTLKVV 325
>MGI|MGI:3603158 [details] [associations]
symbol:Tmem120b "transmembrane protein 120B" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 MGI:MGI:3603158 GO:GO:0016021
eggNOG:NOG329433 GeneTree:ENSGT00390000007848 HOGENOM:HOG000267032
HOVERGEN:HBG108532 OrthoDB:EOG4QJRNS PANTHER:PTHR21433 CTD:144404
OMA:HKECKEW ChiTaRS:TMEM120B EMBL:AK158123 EMBL:AK172110
EMBL:BC022593 EMBL:BC115785 EMBL:BC118014 IPI:IPI00153458
IPI:IPI00875748 RefSeq:NP_001034812.1 UniGene:Mm.391872
PhosphoSite:Q3TA38 PRIDE:Q3TA38 Ensembl:ENSMUST00000067505
Ensembl:ENSMUST00000111619 GeneID:330189 KEGG:mmu:330189
UCSC:uc008znc.1 UCSC:uc012edc.1 InParanoid:Q3TA38 NextBio:399226
Bgee:Q3TA38 CleanEx:MM_TMEM120B Genevestigator:Q3TA38
Uniprot:Q3TA38
Length = 339
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 69/265 (26%), Positives = 124/265 (46%)
Query: 82 KQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR 141
+Q+ ++++ Q + +D +A +LP K G ++ + +G ++V + K+EY ++
Sbjct: 77 QQMTANIKERQNVFFDMEA--YLPKK-NGLYLNLVLGNVSVTLLSNQAKFAYKDEYEKFK 133
Query: 142 -DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDI 200
T + D +++ L++ Y L +RE+IL NGS I
Sbjct: 134 LYLTIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIRESILISNGSRI 185
Query: 201 RPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQR 260
+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q LQ YQR
Sbjct: 186 KGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC 240
Query: 261 LYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPE 319
LY ALG+ +D+ V G + + L L P LF ++ Y + L + + E
Sbjct: 241 LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSTHEECKE 300
Query: 320 WQVSFCGALLVLMAVGNFINTVQTL 344
WQV +++ +GNF+ T++ +
Sbjct: 301 WQVFVLALTFLILFLGNFLTTLKVV 325
>UNIPROTKB|F1NZ36 [details] [associations]
symbol:TMEM120B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
GeneTree:ENSGT00390000007848 PANTHER:PTHR21433 OMA:HKECKEW
EMBL:AADN02034904 IPI:IPI00819825 Ensembl:ENSGALT00000006767
Uniprot:F1NZ36
Length = 369
Score = 235 (87.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 69/266 (25%), Positives = 119/266 (44%)
Query: 82 KQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR 141
+Q+ +++ Q +D +A +LP K G ++ + +G +NV + K+EY ++
Sbjct: 106 EQISTQIKERQNAFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAKFAYKDEYEKFK 162
Query: 142 DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIR 201
+ +++ L++ Y L +RE+IL NGS I+
Sbjct: 163 LYLTIILLLGAVACRFILHY------SRVTDEVFNFLLVWYYCTLTIRESILISNGSRIK 216
Query: 202 PWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRL 261
WW+ HHY + ++ V LTW P+ Q FL +++ Q LQ YQR L
Sbjct: 217 GWWVSHHYVSTFLSGVMLTW-----PDGLMYQMFRSQFLAFSIFQSCVQFLQYYYQRGCL 271
Query: 262 YTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALVGVVPEW 320
Y ALG+ +D+ V G + + L L P LF ++ Y + L + EW
Sbjct: 272 YRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAITLFGLSRHKECKEW 331
Query: 321 QVSFCGALLVLMAVGNFINTVQTLMT 346
QV +L+ +GNF+ T++ + T
Sbjct: 332 QVCVLAFTFLLLFLGNFLTTLKVVHT 357
>WB|WBGene00019716 [details] [associations]
symbol:M01G5.3 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR012926
Pfam:PF07851 GO:GO:0016021 EMBL:FO081641 eggNOG:NOG329433
GeneTree:ENSGT00390000007848 HOGENOM:HOG000267032 PANTHER:PTHR21433
PIR:T33423 RefSeq:NP_497414.2 UniGene:Cel.8947 PaxDb:O76687
EnsemblMetazoa:M01G5.3 GeneID:175305 KEGG:cel:CELE_M01G5.3
UCSC:M01G5.3 CTD:175305 WormBase:M01G5.3 InParanoid:O76687
OMA:FDSILCF NextBio:887588 Uniprot:O76687
Length = 384
Score = 225 (84.3 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 78/265 (29%), Positives = 120/265 (45%)
Query: 83 QLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGP-INVRASRKDVQLKVKEEYNSYR 141
+L E+L A I D LP++ G ++ + +G +NV K + K K+EY ++
Sbjct: 85 KLREELAVANLRIRDMQGE--LPAQTNGFYLNLILGSNLNVSLLTKAEKFKYKQEYEGFK 142
Query: 142 DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFL----YTGLALRENILRING 197
+WIW P +++ + L FL Y L +RE++LR+NG
Sbjct: 143 -----WSITILICLLALCAWIW-------PFRVFDSILCFLMVWYYCTLTIRESVLRVNG 190
Query: 198 SDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQ 257
S I+ WW+ HHY + + + LTW+ G C Q+ R FL + + L QN+YQ
Sbjct: 191 SKIKGWWLSHHYLSCAVPGIVLTWK-DGL--CYQEFR--PYFLIFTFYISLVQLAQNQYQ 245
Query: 258 RQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLK-TALVG 315
L +LG+ +MD+ V G T+ L L P L ++ Y+ L T
Sbjct: 246 SGCLRRLHSLGQGHQMDITVEGFTSWQFKGLTFLLPFLAFGYLYQLYLAWKLFGYTNSET 305
Query: 316 VVPEWQVSFCGALLVLMAVGNFINT 340
WQV LL L+A GN + T
Sbjct: 306 CDGIWQVWTLSLLLGLIAGGNIVTT 330
>FB|FBgn0040384 [details] [associations]
symbol:CG32795 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR012926 Pfam:PF07851
GO:GO:0016021 EMBL:AE014298 eggNOG:NOG329433
GeneTree:ENSGT00390000007848 PANTHER:PTHR21433 OMA:LPECKEW
EMBL:AL133506 EMBL:AY118486 RefSeq:NP_001245509.1
RefSeq:NP_570029.1 RefSeq:NP_726830.1 RefSeq:NP_996340.1
UniGene:Dm.12232 DIP:DIP-19791N IntAct:Q9U1M2 MINT:MINT-814429
STRING:Q9U1M2 PaxDb:Q9U1M2 PRIDE:Q9U1M2 EnsemblMetazoa:FBtr0070491
EnsemblMetazoa:FBtr0070492 EnsemblMetazoa:FBtr0070493
EnsemblMetazoa:FBtr0309881 GeneID:31270 KEGG:dme:Dmel_CG32795
UCSC:CG32795-RA FlyBase:FBgn0040384 InParanoid:Q9U1M2
OrthoDB:EOG4Q2BX7 PhylomeDB:Q9U1M2 GenomeRNAi:31270 NextBio:772774
Bgee:Q9U1M2 GermOnline:CG32795 Uniprot:Q9U1M2
Length = 387
Score = 203 (76.5 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 55/167 (32%), Positives = 78/167 (46%)
Query: 179 LLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQL 238
L++ Y L +RE+IL++NGS I+ WW HH+ + + A V L W P Q
Sbjct: 161 LVWYYCTLTIRESILKVNGSRIKGWWRAHHFISTVAAGVLLVW-----PQGEHWQIFRMQ 215
Query: 239 FLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPIL 294
F+ + + + LQ YQ+ LY ALG+ MD+ G +W L P L
Sbjct: 216 FMYFNVYISIVQYLQFGYQKGLLYRLKALGERHNMDIT---IEGFHSWMWRGLSFLLPFL 272
Query: 295 FILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTV 341
FI G++AY L K A W VS L +L+ VGN T+
Sbjct: 273 FIGYGYQAYNAWTLYKLAYSPPDAPWHVSVMSGLFLLLFVGNMATTL 319
Score = 65 (27.9 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 15/65 (23%), Positives = 39/65 (60%)
Query: 81 DKQLEEDLQKA----QCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEE 136
DK+ +DL K + +++ + S LP+K+ G ++++ +G +NV ++ +++ K++
Sbjct: 70 DKEKVDDLHKMTLKRKAQLHEIEQS--LPAKS-GRYLQIILGDVNVSILNRNDKVRYKDD 126
Query: 137 YNSYR 141
Y ++
Sbjct: 127 YEKFK 131
>UNIPROTKB|I3LEI2 [details] [associations]
symbol:I3LEI2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021
GeneTree:ENSGT00390000007848 PANTHER:PTHR21433 OMA:NEWDELN
Ensembl:ENSSSCT00000026475 Uniprot:I3LEI2
Length = 315
Score = 206 (77.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 72/251 (28%), Positives = 112/251 (44%)
Query: 76 DSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKE 135
+++ A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K K
Sbjct: 75 EAEEAAQELESQIKERQGLFFDMEA--YLPKK-NGXYLSLVLGNVNVTLLSKQAN---KA 128
Query: 136 EYNSYRDRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRI 195
EY ++ + W C L + W Y L +RE+IL
Sbjct: 129 EYEKFKLYLTIILILVSFTCRFLLNSRWASCRAG----LARVWY---YCTLTIRESILIN 181
Query: 196 NGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNR 255
NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q +Q
Sbjct: 182 NGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQS---FVQFX 233
Query: 256 YQRQRLYTRIALGKAKRMDV-VWGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTALV 314
Y R R ALG+ MD+ V G + + L L P LF Q ++ + L L A
Sbjct: 234 Y-RLR-----ALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGQFWQLFNALTLFSLARD 287
Query: 315 GVVPEWQVSFC 325
EWQV C
Sbjct: 288 PECKEWQVLMC 298
>UNIPROTKB|H0YG77 [details] [associations]
symbol:TMEM120B "Transmembrane protein 120B" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR012926 Pfam:PF07851 GO:GO:0016021 EMBL:AC084018
PANTHER:PTHR21433 HGNC:HGNC:32008 ChiTaRS:TMEM120B
Ensembl:ENST00000541467 Bgee:H0YG77 Uniprot:H0YG77
Length = 247
Score = 192 (72.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 55/203 (27%), Positives = 97/203 (47%)
Query: 74 RFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKV 133
R +++L +Q+ ++++ Q + +D +A +LP K G ++ + +G +NV +
Sbjct: 49 REEAELV-QQMAANIKERQDVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAKFAY 104
Query: 134 KEEYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENI 192
K+EY ++ T + D +++ L++ Y L +RE+I
Sbjct: 105 KDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIRESI 156
Query: 193 LRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLL 252
L NGS I+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q L
Sbjct: 157 LISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGPIYQKFRNQFLAFSIFQSCVQFL 211
Query: 253 QNRYQRQRLYTRIALGKAKRMDV 275
Q YQR LY ALG+ +D+
Sbjct: 212 QYYYQRGCLYRLRALGERNHLDL 234
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.137 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 363 298 0.00094 115 3 11 22 0.45 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 626 (67 KB)
Total size of DFA: 226 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.56u 0.13s 19.69t Elapsed: 00:00:00
Total cpu time: 19.56u 0.13s 19.69t Elapsed: 00:00:00
Start: Fri May 10 08:11:42 2013 End: Fri May 10 08:11:42 2013