BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017961
(363 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54IK2|TM120_DICDI Transmembrane protein 120 homolog OS=Dictyostelium discoideum
GN=tmem120 PE=3 SV=1
Length = 368
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 122/243 (50%), Gaps = 35/243 (14%)
Query: 102 AFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRT-------ALLFLLFPST 154
+F P FV++F+G +NV+ R++ + ++K+EY ++ +T +L LL+P +
Sbjct: 119 SFTPETG-SIFVRLFLGQVNVKHMRENEKFRLKQEYEKFKKKTNPQFILFVVLLLLYPQS 177
Query: 155 LLILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLM 214
+ SW Q WLL+ Y LALRENIL +NGS I+PWWI HHY ++
Sbjct: 178 SFVTTSW--------------QIWLLYYYITLALRENILLVNGSSIKPWWIMHHYLSIAG 223
Query: 215 ALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMD 274
+L +L + + + Q V F + QG+ +L NRYQ+ RLY +A+GKA +D
Sbjct: 224 SLTNLLFPLSESFSYFLPQ--VTYF---SGCQGLVQILTNRYQQGRLYKLVAMGKANIID 278
Query: 275 VV-----WGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAL--VGVVPEWQVSFCGA 327
V WG G L P L +Q F+ Y A G V EWQV CG
Sbjct: 279 VTGESEGWGNDPGWTPSALFLFPFLLFVQFFQLYNSFSFFAFAYQRSGYV-EWQVFSCGF 337
Query: 328 LLV 330
+ +
Sbjct: 338 IFL 340
>sp|A6QPF8|T120B_BOVIN Transmembrane protein 120B OS=Bos taurus GN=TMEM120B PE=2 SV=1
Length = 339
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 49/354 (13%)
Query: 12 EEEEVERV----VEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSIS 67
E +E R+ +EE LQ + ++ IN+ + + L+ L+L R H+S
Sbjct: 21 ELQETHRIYKQKLEELNALQTSCSSSINKQKTRLKDLK---LTLQRYKR------HAS-- 69
Query: 68 STNNLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRK 127
R +++L +Q+ ++++ Q + +D +A +LP K G ++ + +G +NV
Sbjct: 70 ------REEAELV-QQMGANIKERQNVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSN 119
Query: 128 DVQLKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQLYQAWLLFLYTGL 186
+ K+EY ++ ++ LL + L + D +++ L++ Y L
Sbjct: 120 QAKFAYKDEYEKFKLYLTIILLLGAVACRFFLHYRVTD--------EVFNFLLVWYYCTL 171
Query: 187 ALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQ 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q
Sbjct: 172 TIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQ 226
Query: 247 GVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEA 302
LQ YQR LY ALG+ +D+ G +W L P LF ++
Sbjct: 227 SCVQFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTFLLPFLFCGHFWQL 283
Query: 303 YVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK---SRFKAK 353
Y + L + + EWQV +++ +GNF+ T++ + TK +R KAK
Sbjct: 284 YNAVTLFELSSHEECREWQVFVLALTFLVLFLGNFLTTLKVVHTKLQQNRSKAK 337
>sp|A0PK00|T120B_HUMAN Transmembrane protein 120B OS=Homo sapiens GN=TMEM120B PE=2 SV=1
Length = 339
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 168/357 (47%), Gaps = 46/357 (12%)
Query: 12 EEEEVERVVEEAKELQEAAATLINRT-SSEEQSLRQRALSLDSNIRRLRSLLHSSISSTN 70
E +E R+ ++ E A TL + + S +++ L+ L+L R H+S
Sbjct: 21 ELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCKR------HAS----- 69
Query: 71 NLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQ 130
R +++L +Q+ ++++ Q + +D +A +LP K G ++ + +G +NV +
Sbjct: 70 ---REEAELV-QQMAANIKERQDVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAK 122
Query: 131 LKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALR 189
K+EY ++ ++ LL + +L + D +++ L++ Y L +R
Sbjct: 123 FAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIR 174
Query: 190 ENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVA 249
E+IL NGS I+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q
Sbjct: 175 ESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGPIYQKFRNQFLAFSIFQSCV 229
Query: 250 MLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAYVG 305
LQ YQR LY ALG+ +D+ G +W L P LF ++ Y
Sbjct: 230 QFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTFLLPFLFCGHFWQLYNA 286
Query: 306 LLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAKMKKSKSKPE 362
+ L + + EWQV +++ +GNF+ T++ + AK++K++ K +
Sbjct: 287 VTLFELSSHEECREWQVFVLAFTFLILFLGNFLTTLKVV------HAKLQKNRGKTK 337
>sp|Q3TA38|T120B_MOUSE Transmembrane protein 120B OS=Mus musculus GN=Tmem120b PE=2 SV=1
Length = 339
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 171/369 (46%), Gaps = 39/369 (10%)
Query: 1 MDEKRSNCEKVEEEEVERVVEEAKELQEAAATLINRTSSEEQSLRQR--ALSLDSNIRRL 58
M + CE+ E E+E E +ELQE I + EE + Q + S+ R L
Sbjct: 1 MSGQLERCER-EWHELE---GEFQELQETHR--IYKQKLEELTSLQTLCSTSISKQKRHL 54
Query: 59 RSLLHSSISSTNNLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIG 118
+ L H+ + ++ L +Q+ ++++ Q + +D +A +LP K G ++ + +G
Sbjct: 55 KDLKHTLQRYKRHSSHEEAALI-QQMTANIKERQNVFFDMEA--YLPKK-NGLYLNLVLG 110
Query: 119 PINVRASRKDVQLKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQLYQA 177
++V + K+EY ++ ++ LL + +L + D +++
Sbjct: 111 NVSVTLLSNQAKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------EVFNF 162
Query: 178 WLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQ 237
L++ Y L +RE+IL NGS I+ WW+ HHY + ++ V LTW PN Q+
Sbjct: 163 LLVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRN 217
Query: 238 LFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPI 293
FL +++ Q LQ YQR LY ALG+ +D+ G +W L P
Sbjct: 218 QFLAFSIFQSCVQFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTFLLPF 274
Query: 294 LFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAK 353
LF ++ Y + L + + EWQV +++ +GNF+ T++ + AK
Sbjct: 275 LFCGHFWQLYNAVTLFELSTHEECKEWQVFVLALTFLILFLGNFLTTLKVV------HAK 328
Query: 354 MKKSKSKPE 362
+ K+++K +
Sbjct: 329 LHKNRNKTK 337
>sp|A3KNK1|T120A_DANRE Transmembrane protein 120A OS=Danio rerio GN=tmem120a PE=2 SV=1
Length = 341
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 22/262 (8%)
Query: 99 DASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLIL 158
+ AFLP K G ++ + +G +NV K + K+EY ++ +L L F T L
Sbjct: 95 EMEAFLPKK-NGLYLSLVLGNVNVTLLNKQSKFAYKDEYEKFKLYLTVLLLFFSFTCRFL 153
Query: 159 RSW-IWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALV 217
S+ + D L+ L++ Y L +RE+IL NGS I+ WW++ HY + ++ V
Sbjct: 154 VSYRVVDA--------LFNFLLVWYYCTLTIRESILINNGSKIKGWWVFQHYVSTFLSGV 205
Query: 218 SLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVW 277
LTW P+ Q FL ++M Q YQ LY ALG+ MD+
Sbjct: 206 MLTW-----PDGELYQMFRNQFLSYSMYINFVQFFQYYYQSGCLYRLRALGERHNMDLT- 259
Query: 278 GETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMA 333
G +W L P LF+ F+ Y G+ L + + EWQV CG+ +++
Sbjct: 260 --VEGFQSWMWRGLTFLLPFLFLGHFFQLYNGITLFQMTQLPEWKEWQVLMCGSTFLVLF 317
Query: 334 VGNFINTVQTLMTKSRFKAKMK 355
+GNF T+ + K + K K
Sbjct: 318 MGNFFTTLGVVYHKYMDQDKAK 339
>sp|Q9U1M2|TM120_DROME Transmembrane protein 120 homolog OS=Drosophila melanogaster
GN=CG32795 PE=1 SV=1
Length = 387
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 154/338 (45%), Gaps = 37/338 (10%)
Query: 34 INRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISS--------TNNLLRFDSKLA--DKQ 83
+N+ +E +S +R + L + + + + I T +L +F + DK+
Sbjct: 13 LNKEFAELESCNRRYIELLEQLHSHQQICFNEIKHQRYRMNQITTSLRQFKGPVPAEDKE 72
Query: 84 LEEDLQKA----QCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNS 139
+DL K + +++ + S LP+K+ G ++++ +G +NV ++ +++ K++Y
Sbjct: 73 KVDDLHKMTLKRKAQLHEIEQS--LPAKS-GRYLQIILGDVNVSILNRNDKVRYKDDYEK 129
Query: 140 YRDRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSD 199
++ ++ L+ LI + AF L ++ Y L +RE+IL++NGS
Sbjct: 130 FKLILNVIGLIMAFFNLIFN---YRALELAFIFLL-----VWYYCTLTIRESILKVNGSR 181
Query: 200 IRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQ 259
I+ WW HH+ + + A V L W P Q F+ + + + LQ YQ+
Sbjct: 182 IKGWWRAHHFISTVAAGVLLVW-----PQGEHWQIFRMQFMYFNVYISIVQYLQFGYQKG 236
Query: 260 RLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTALVG 315
LY ALG+ MD+ G +W L P LFI G++AY L K A
Sbjct: 237 LLYRLKALGERHNMDIT---IEGFHSWMWRGLSFLLPFLFIGYGYQAYNAWTLYKLAYSP 293
Query: 316 VVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAK 353
W VS L +L+ VGN T+ + K R +AK
Sbjct: 294 PDAPWHVSVMSGLFLLLFVGNMATTLWVVPEKIRERAK 331
>sp|A1L2R7|T120A_XENLA Transmembrane protein 120A OS=Xenopus laevis GN=tmem120a PE=2 SV=1
Length = 336
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 99 DASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLIL 158
+ +FLP K G ++ + +G +NV K + K+EY ++ L+ + +L++
Sbjct: 95 EMESFLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFK--------LYLTIILMV 145
Query: 159 RSWIWDGCLPAFPVQ-LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALV 217
S+I L + ++ L++ Y L +RE+IL NGS I+ WW+ +HY + ++ V
Sbjct: 146 LSFICRFLLNSRVTDAVFNFLLVWYYCTLTIRESILINNGSRIKGWWVLNHYISTFLSGV 205
Query: 218 SLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVW 277
LTW P+ Q FL ++M Q LQ YQ LY ALG+ MD+
Sbjct: 206 MLTW-----PDGLMYQMFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHNMDLT- 259
Query: 278 GETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMA 333
G +W L P LF Q ++ Y + L K A EWQV CG ++
Sbjct: 260 --VEGFQSWMWRGLTFLLPFLFFGQFWQLYNAITLFKLARHPECKEWQVIMCGLPFLVHF 317
Query: 334 VGNFINTVQTLMTK 347
+GNF T++ + K
Sbjct: 318 LGNFFTTLRVVHQK 331
>sp|Q1LY80|T120B_DANRE Transmembrane protein 120B OS=Danio rerio GN=tmem120b PE=2 SV=1
Length = 337
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 34/348 (9%)
Query: 9 EKVEEEEVERVVEEAKELQEAAATLINRTSSEE----QSLRQRALSLD-SNIRRLRSLLH 63
E+ + E E + +E ++LQE + R EE Q++ A+S ++ L+ L+
Sbjct: 4 ERCQSEWTE-IEQEYQQLQETHK--VYRQKLEELTNLQAICSSAISKQRKGLKDLKQSLY 60
Query: 64 SSISSTNNLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVR 123
S N DS++ + L+ +++ Q + +D +A +LP K G ++ + +G +NV
Sbjct: 61 KCKKSCNGK---DSEVIN-DLQVQIKERQNVFFDMEA--YLP-KRNGLYLNLVLGNVNVT 113
Query: 124 ASRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLYQAWLLFLY 183
+ K+EY ++ ++ + T L L ++ +++ L++ Y
Sbjct: 114 LLSNQAKFAYKDEYEKFKLYMTIILMFGAVTCLFLLNY-------RVTDEIFNFLLVWYY 166
Query: 184 TGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWA 243
L +RE+ILR NGS I+ WW+ HHY + ++ V LTW P Q FL ++
Sbjct: 167 CTLTIRESILRSNGSRIKGWWVSHHYVSTFLSGVMLTW-----PEGPMYQMFRSQFLAFS 221
Query: 244 MMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQG 299
+ Q LQ YQ LY ALG+ ++D+ G +W L P LF
Sbjct: 222 IYQSCVQFLQYYYQSGCLYRLRALGERNQLDLT---VEGFQSWMWRGLTFLLPFLFFGHF 278
Query: 300 FEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK 347
++ Y + L + + + EWQV +++ +GNF+ T++ + K
Sbjct: 279 WQLYNAVTLFRLSALDDCKEWQVFMLALTFLVLFLGNFLTTLKVVHQK 326
>sp|Q5FWV6|T120A_XENTR Transmembrane protein 120A OS=Xenopus tropicalis GN=tmem120a PE=2
SV=2
Length = 336
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 99 DASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR-DRTALLFLLFPSTLLI 157
+ +FLP K G ++ + +G +NV K + K+EY ++ T +L +L +
Sbjct: 95 EMESFLPKK-NGLYLSLVLGNVNVTLLSKQSKFAYKDEYEKFKLYLTMILMVLSFICRFV 153
Query: 158 LRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALV 217
L S + D ++ L++ Y L +RE+IL NGS I+ WW+ +HY + ++ V
Sbjct: 154 LNSRVTDA--------VFNFLLVWYYCTLTIRESILINNGSRIKGWWVLNHYISTFLSGV 205
Query: 218 SLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVW 277
LTW P+ Q FL ++M Q LQ YQ LY ALG+ MD+
Sbjct: 206 MLTW-----PDGLMYQMFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHNMDLT- 259
Query: 278 GETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMA 333
G +W L P LF Q ++ Y + L K A EWQV CG ++
Sbjct: 260 --VEGFQSWMWRGLTFLLPFLFFGQFWQLYNAITLFKLARHPECKEWQVIMCGLPFLVHF 317
Query: 334 VGNFINTVQTLMTK 347
+GNF T++ + K
Sbjct: 318 LGNFFTTLRVVHQK 331
>sp|Q8C1E7|T120A_MOUSE Transmembrane protein 120A OS=Mus musculus GN=Tmem120a PE=2 SV=1
Length = 343
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 14 EEVERVVE-EAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNL 72
+E R+ + +EL + A N + +++ L++ AL L ++ R L S
Sbjct: 27 QETHRLYRLKLEELTKLQANCTNSITRQKKRLQELALVL----KKCRPSLPS-------- 74
Query: 73 LRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLK 132
+S A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K +
Sbjct: 75 ---ESMEAAQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFA 128
Query: 133 VKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALREN 191
K+EY ++ ++ ++ T +L S + D + L++ Y L +RE+
Sbjct: 129 YKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRES 180
Query: 192 ILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAML 251
IL NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q
Sbjct: 181 ILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQF 235
Query: 252 LQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 288
LQ YQ LY ALG+ MD+ G +W
Sbjct: 236 LQYYYQSGCLYRLRALGERHTMDLT---VEGFQSWMW 269
>sp|Q5HZE2|T120A_RAT Transmembrane protein 120A OS=Rattus norvegicus GN=Tmem120a PE=2
SV=1
Length = 343
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 39/279 (13%)
Query: 12 EEEEVERV-VEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTN 70
E + RV +EE +LQ+ I R +++ L++ AL L ++ R L S
Sbjct: 28 ETHRLYRVKLEELTKLQDNCTNSITR---QKKRLQELALVL----KKCRPSLPS------ 74
Query: 71 NLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQ 130
+S A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K +
Sbjct: 75 -----ESLEAAQELESQIKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAK 126
Query: 131 LKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALR 189
K+EY ++ ++ ++ T +L S + D + L++ Y L +R
Sbjct: 127 FAYKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIR 178
Query: 190 ENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVA 249
E+IL NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q
Sbjct: 179 ESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFV 233
Query: 250 MLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 288
LQ YQ LY ALG+ MD+ G +W
Sbjct: 234 QFLQYYYQSGCLYRLRALGERHTMDLT---VEGFQSWMW 269
>sp|Q6DE21|T12BB_XENLA Transmembrane protein 120B-B OS=Xenopus laevis GN=tmem120b-b PE=2
SV=1
Length = 335
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 163/354 (46%), Gaps = 36/354 (10%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALS--LDSNIRRLRSL---LHSSIS 67
+EE + +E ++LQE + + EE S Q S ++ + RRL L LH
Sbjct: 7 QEEWGELEKEFQQLQETHK--VYKQKLEELSSLQNLCSSYINKHKRRLTELKGNLHGYKH 64
Query: 68 STNNLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRK 127
++N + K +Q++ +++ +D +A +LP K ++ + +G +NV K
Sbjct: 65 TSN----LEEKELIQQIDGTIKERHNAFFDMEA--YLPKK-NSLYLNLVLGNVNVTLLSK 117
Query: 128 DVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGL 186
+ K+EY ++ ++ LL T +L + D +++ L++ + L
Sbjct: 118 QTKFAYKDEYEKFKLYLTIILLLGAITCRFVLHYRVTD--------EVFNFLLVWYFCTL 169
Query: 187 ALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQ 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q FL +++ Q
Sbjct: 170 TIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQMFRNQFLAFSIFQ 224
Query: 247 GVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEA 302
LQ YQ LY ALG+ + + G +W L P+LF ++
Sbjct: 225 SCVQFLQYYYQSGCLYRLRALGERNHLHLT---VEGFQSWMWRGLTFLLPVLFFGHFWQL 281
Query: 303 YVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAKMKK 356
Y + L + EWQV +L+ +GNF+ T++ + TK + K K+KK
Sbjct: 282 YNAMTLFGLSRHEECKEWQVFVLALTFLLLFLGNFLTTLKVVHTKFQ-KNKLKK 334
>sp|Q9BXJ8|T120A_HUMAN Transmembrane protein 120A OS=Homo sapiens GN=TMEM120A PE=2 SV=1
Length = 343
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 24/251 (9%)
Query: 80 ADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNS 139
A ++LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY
Sbjct: 79 AAQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEK 135
Query: 140 YRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGS 198
++ ++ +L T +L S + D + L++ Y L +RE+IL NGS
Sbjct: 136 FKLYLTIILILISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGS 187
Query: 199 DIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQR 258
I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ YQ
Sbjct: 188 RIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQS 242
Query: 259 QRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTALV 314
LY ALG+ MD+ G +W L P LF ++ + L L A
Sbjct: 243 GCLYRLRALGERHTMDLT---VEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAQD 299
Query: 315 GVVPEWQVSFC 325
EWQV C
Sbjct: 300 PQCKEWQVLMC 310
>sp|Q05B45|T120A_BOVIN Transmembrane protein 120A OS=Bos taurus GN=TMEM120A PE=2 SV=1
Length = 343
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 99 DASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LI 157
D A+LP K G ++ + +G +NV K + K+EY ++ ++ +L T +
Sbjct: 96 DMEAYLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFL 154
Query: 158 LRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALV 217
L S + D + L++ Y L +RE+IL NGS I+ WW++HHY + ++ V
Sbjct: 155 LNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGV 206
Query: 218 SLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVW 277
LTW P+ Q+ FL ++M Q LQ YQ LY ALG+ MD+
Sbjct: 207 MLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLT- 260
Query: 278 GETAGVDGQLW 288
G +W
Sbjct: 261 --VEGFQSWMW 269
>sp|Q5EAX9|T12BA_XENLA Transmembrane protein 120B-A OS=Xenopus laevis GN=tmem120b-a PE=2
SV=1
Length = 335
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 31/282 (10%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALS--LDSNIRRLRSL---LHSSIS 67
+EE + +E ++LQE + + EE + Q S ++ + RRL LH +
Sbjct: 7 QEEWSEIEKEFQQLQETHK--VYKQKLEELNSLQNLCSSCINKHKRRLTEFKGNLHG-LK 63
Query: 68 STNNLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRK 127
T+NL + K +Q++ +++ + +D +A +LP K G ++ + +G +NV
Sbjct: 64 RTSNL---EEKELVQQIDGTIKERRNAFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLST 117
Query: 128 DVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGL 186
+ K+EY ++ ++ LL T +L + D +++ L++ Y L
Sbjct: 118 QAKFAYKDEYEKFKLYLTIILLLGAITCRFVLNYRVTD--------EVFNFLLVWYYCTL 169
Query: 187 ALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQ 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q FL +++ Q
Sbjct: 170 TIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQIFRNQFLAFSIFQ 224
Query: 247 GVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 288
LQ YQ LY ALG+ +D+ G +W
Sbjct: 225 SCVQFLQYYYQSGCLYRLRALGERNHLDLT---VEGFQSWMW 263
>sp|Q63ZG0|T120B_XENTR Transmembrane protein 120B OS=Xenopus tropicalis GN=tmem120b PE=2
SV=1
Length = 335
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 31/282 (10%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALS--LDSNIRRLRSL---LHSSIS 67
+EE + +E ++LQE + + EE + Q S ++ + RRL L LH
Sbjct: 7 QEEWGELEKEFQQLQETHK--VYKQKLEELNGLQNLCSSYINKHKRRLTELKGNLHGYKH 64
Query: 68 STNNLLRFDSKLADKQLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRK 127
++N + K +Q+ +++ +D +A +LP K G ++ + +G +NV
Sbjct: 65 TSN----VEEKELVQQINSTIKERHNAFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSN 117
Query: 128 DVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGL 186
+ K+EY ++ ++ LL T +L + D +++ L++ Y L
Sbjct: 118 QAKFAYKDEYEKFKLYLTIILLLGAITCRFVLHYRVTD--------EVFNFLLVWYYCTL 169
Query: 187 ALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQ 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q FL +++ Q
Sbjct: 170 TIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQIFRNQFLAFSIYQ 224
Query: 247 GVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 288
LQ YQ LY ALG+ +D+ G +W
Sbjct: 225 SCVQFLQYYYQSGCLYRLRALGERNHLDLT---VEGFQSWMW 263
>sp|Q9Z735|RIBD_CHLPN Riboflavin biosynthesis protein RibD OS=Chlamydia pneumoniae
GN=ribD PE=3 SV=1
Length = 376
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 205 IYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTR 264
I H + +ALV ++ GQ +Q G+Q+++ + A L YQR +
Sbjct: 94 IKHKVSRVFVALVDPDPKVAGQGIAMLRQAGIQVYVGIGESEAQASLQPYLYQRTHNFPW 153
Query: 265 IALGKAKRMDVVWGETAGVDGQL-WLLCP 292
L A +D G+ A G+ W+ CP
Sbjct: 154 TILKSAASVD---GQVADSQGKSQWITCP 179
>sp|P45756|GSPA_ECOLI Putative general secretion pathway protein A OS=Escherichia coli
(strain K12) GN=gspA PE=1 SV=1
Length = 489
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 27 QEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNLLRFDSKLADKQLEE 86
Q AA ++ ++ EQ R A + D +L LH + S ++ ++ L +++ +
Sbjct: 57 QGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILD 116
Query: 87 DLQKAQCLIYDG 98
DLQ+A LI DG
Sbjct: 117 DLQRAISLIPDG 128
>sp|Q54K81|TALB_DICDI Talin-B OS=Dictyostelium discoideum GN=talB PE=2 SV=1
Length = 2614
Score = 32.3 bits (72), Expect = 5.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNL 72
+ +V ++ KE+ E + L+N T+ +Q ++ LDS + ++LL +S S+ N +
Sbjct: 1484 QADVSQLAATKKEVSELISKLLNATNGHDQDATTISIDLDSLSKSEQALLDASRSTANYM 1543
Query: 73 LRF 75
+F
Sbjct: 1544 SQF 1546
>sp|P77172|YFGF_ECOLI Cyclic di-GMP phosphodiesterase YfgF OS=Escherichia coli (strain
K12) GN=yfgF PE=1 SV=1
Length = 747
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 235 GVQLFLQWAMMQGVAM-LLQNRYQRQRLYTRIALG-----------------KAKRMDVV 276
+ +F WA + G+A+ + +Y Y ++L +R +V
Sbjct: 55 SMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVS 114
Query: 277 WGETAGVDGQLW--LLCP--ILFILQGFEAYVGLLLLKTALVGVVP 318
G+T + +++ ++ P + IL F A+VGLL + LVGV+P
Sbjct: 115 HGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMP 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,727,113
Number of Sequences: 539616
Number of extensions: 4695025
Number of successful extensions: 19621
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 19378
Number of HSP's gapped (non-prelim): 283
length of query: 363
length of database: 191,569,459
effective HSP length: 119
effective length of query: 244
effective length of database: 127,355,155
effective search space: 31074657820
effective search space used: 31074657820
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)