Query 017963
Match_columns 363
No_of_seqs 224 out of 377
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 04:57:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017963.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017963hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234 Predicted UDP-galactos 99.9 5E-24 1.1E-28 207.5 30.4 298 47-358 15-327 (345)
2 PF08449 UAA: UAA transporter 99.9 2.6E-21 5.6E-26 187.7 30.0 284 62-359 16-303 (303)
3 PF06027 DUF914: Eukaryotic pr 99.9 1.2E-19 2.7E-24 178.6 28.6 272 73-358 39-310 (334)
4 PF04142 Nuc_sug_transp: Nucle 99.9 1.1E-19 2.4E-24 172.1 23.5 219 112-343 15-243 (244)
5 PLN00411 nodulin MtN21 family 99.9 1.6E-18 3.4E-23 172.7 31.3 285 59-360 25-335 (358)
6 TIGR00817 tpt Tpt phosphate/ph 99.9 1.1E-18 2.4E-23 168.5 29.5 278 60-356 15-296 (302)
7 PTZ00343 triose or hexose phos 99.8 2.5E-16 5.5E-21 156.2 34.0 291 47-353 49-348 (350)
8 TIGR00950 2A78 Carboxylate/Ami 99.8 6E-16 1.3E-20 145.1 30.2 253 65-348 7-259 (260)
9 PRK11453 O-acetylserine/cystei 99.8 2.4E-15 5.2E-20 145.5 32.0 219 121-355 65-289 (299)
10 KOG1583 UDP-N-acetylglucosamin 99.8 6.7E-18 1.4E-22 159.6 12.3 264 78-352 34-313 (330)
11 PRK11272 putative DMT superfam 99.8 8E-15 1.7E-19 141.4 33.7 280 43-355 4-287 (292)
12 PRK15430 putative chlorampheni 99.7 2.3E-14 5E-19 138.6 28.1 210 118-355 77-287 (296)
13 PRK10532 threonine and homoser 99.7 2.6E-13 5.7E-18 131.0 32.3 255 65-357 30-285 (293)
14 PRK11689 aromatic amino acid e 99.7 1.2E-13 2.5E-18 133.6 28.1 214 121-355 68-289 (295)
15 KOG2765 Predicted membrane pro 99.6 7.3E-15 1.6E-19 144.1 18.8 234 112-358 157-395 (416)
16 TIGR03340 phn_DUF6 phosphonate 99.6 1.2E-13 2.7E-18 132.3 26.7 214 116-350 65-280 (281)
17 COG0697 RhaT Permeases of the 99.5 2.6E-11 5.7E-16 113.8 31.3 210 118-354 74-288 (292)
18 TIGR00688 rarD rarD protein. T 99.5 3.1E-11 6.6E-16 113.9 25.3 146 60-222 15-165 (256)
19 KOG1443 Predicted integral mem 99.4 7.9E-11 1.7E-15 113.4 20.9 224 117-353 87-315 (349)
20 TIGR00776 RhaT RhaT L-rhamnose 99.3 8.8E-10 1.9E-14 106.8 26.7 222 111-352 56-287 (290)
21 COG2962 RarD Predicted permeas 99.3 2.4E-10 5.2E-15 109.6 22.1 217 110-358 68-288 (293)
22 PF03151 TPT: Triose-phosphate 99.3 7.2E-11 1.6E-15 102.3 15.5 150 204-353 1-153 (153)
23 KOG1582 UDP-galactose transpor 99.3 2.5E-10 5.5E-15 108.4 20.1 293 40-355 36-334 (367)
24 KOG3912 Predicted integral mem 99.3 1.2E-09 2.6E-14 104.2 21.2 297 47-352 4-333 (372)
25 KOG1441 Glucose-6-phosphate/ph 99.2 8.6E-11 1.9E-15 115.1 11.6 296 44-361 14-315 (316)
26 TIGR00803 nst UDP-galactose tr 99.2 5.9E-10 1.3E-14 103.3 16.0 204 133-351 18-222 (222)
27 KOG4510 Permease of the drug/m 99.2 1.7E-11 3.7E-16 116.1 4.2 283 38-351 33-323 (346)
28 KOG1580 UDP-galactose transpor 99.1 2E-09 4.4E-14 100.6 15.2 221 122-355 93-316 (337)
29 PF13536 EmrE: Multidrug resis 98.9 7.4E-09 1.6E-13 86.5 7.8 73 117-190 37-110 (113)
30 KOG1444 Nucleotide-sugar trans 98.9 4.9E-07 1.1E-11 88.0 21.3 278 60-361 25-308 (314)
31 COG5006 rhtA Threonine/homoser 98.8 3.9E-06 8.4E-11 79.6 24.4 263 45-349 14-278 (292)
32 KOG1581 UDP-galactose transpor 98.8 2.7E-06 5.9E-11 82.4 22.7 226 119-357 88-317 (327)
33 PF00892 EamA: EamA-like trans 98.7 2.3E-07 4.9E-12 76.4 11.3 116 64-184 8-124 (126)
34 KOG4314 Predicted carbohydrate 98.6 1E-06 2.2E-11 80.9 13.4 222 119-359 58-282 (290)
35 TIGR00950 2A78 Carboxylate/Ami 98.2 4.6E-05 1E-09 71.3 15.6 118 60-181 141-259 (260)
36 KOG1442 GDP-fucose transporter 98.2 3.2E-07 6.9E-12 87.7 0.6 220 116-355 108-329 (347)
37 PLN00411 nodulin MtN21 family 98.2 5E-05 1.1E-09 76.1 16.1 72 120-191 262-333 (358)
38 PRK15051 4-amino-4-deoxy-L-ara 98.2 1.8E-05 3.9E-10 66.4 10.5 65 122-186 45-109 (111)
39 KOG2766 Predicted membrane pro 98.1 6.8E-07 1.5E-11 84.8 -0.1 254 73-353 44-299 (336)
40 PF06800 Sugar_transport: Suga 98.1 0.00066 1.4E-08 65.5 20.0 113 111-224 42-159 (269)
41 PRK10532 threonine and homoser 98.0 0.00036 7.9E-09 67.4 17.1 69 120-188 214-283 (293)
42 PF05653 Mg_trans_NIPA: Magnes 98.0 9.4E-05 2E-09 72.5 13.0 68 123-190 59-126 (300)
43 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.00011 2.5E-09 71.2 12.6 108 75-186 176-288 (290)
44 COG5070 VRG4 Nucleotide-sugar 97.9 0.00021 4.6E-09 67.0 13.2 260 73-356 33-299 (309)
45 PRK11689 aromatic amino acid e 97.9 0.00034 7.4E-09 67.7 15.0 69 118-186 219-287 (295)
46 COG2510 Predicted membrane pro 97.8 2.8E-05 6E-10 66.8 4.7 112 73-185 27-138 (140)
47 PF03151 TPT: Triose-phosphate 97.8 0.00072 1.6E-08 58.3 13.7 111 73-183 32-150 (153)
48 PRK15430 putative chlorampheni 97.8 0.00081 1.8E-08 65.1 15.3 71 116-186 215-285 (296)
49 TIGR03340 phn_DUF6 phosphonate 97.8 8.3E-05 1.8E-09 71.3 8.1 67 117-183 214-280 (281)
50 PRK11272 putative DMT superfam 97.8 0.0011 2.4E-08 64.0 15.8 64 124-187 223-286 (292)
51 TIGR00817 tpt Tpt phosphate/ph 97.6 0.00062 1.3E-08 65.8 11.0 61 126-186 233-293 (302)
52 PRK13499 rhamnose-proton sympo 97.4 0.086 1.9E-06 52.8 24.5 110 110-219 69-190 (345)
53 PRK10452 multidrug efflux syst 97.4 0.0018 4E-08 55.3 10.1 68 121-188 37-105 (120)
54 PRK11453 O-acetylserine/cystei 97.4 0.009 1.9E-07 57.9 16.1 65 124-188 225-289 (299)
55 KOG2922 Uncharacterized conser 97.2 0.00095 2.1E-08 65.5 7.5 70 123-192 73-142 (335)
56 PRK02971 4-amino-4-deoxy-L-ara 97.2 0.0022 4.7E-08 55.4 8.8 66 123-188 57-124 (129)
57 COG0697 RhaT Permeases of the 97.2 0.018 3.9E-07 53.8 15.5 76 112-187 212-288 (292)
58 PF00892 EamA: EamA-like trans 97.2 0.0051 1.1E-07 50.2 10.4 37 317-353 89-126 (126)
59 COG2076 EmrE Membrane transpor 97.2 0.0044 9.5E-08 51.8 9.8 65 122-186 38-103 (106)
60 PRK10650 multidrug efflux syst 97.1 0.0042 9.1E-08 52.2 9.6 63 122-184 43-106 (109)
61 PRK11431 multidrug efflux syst 97.1 0.0049 1.1E-07 51.4 9.9 63 123-185 38-101 (105)
62 PRK09541 emrE multidrug efflux 97.1 0.0059 1.3E-07 51.3 9.9 66 122-187 38-104 (110)
63 TIGR00688 rarD rarD protein. T 96.9 0.04 8.7E-07 51.8 15.6 136 204-352 3-141 (256)
64 COG2510 Predicted membrane pro 96.9 0.013 2.8E-07 50.7 10.7 125 205-350 5-136 (140)
65 PF13536 EmrE: Multidrug resis 96.8 0.037 8E-07 45.9 12.3 43 317-359 69-112 (113)
66 PTZ00343 triose or hexose phos 96.6 0.01 2.2E-07 59.2 9.5 64 121-184 283-346 (350)
67 PF00893 Multi_Drug_Res: Small 96.3 0.015 3.2E-07 47.1 6.8 54 123-176 38-92 (93)
68 PF08449 UAA: UAA transporter 95.6 0.27 5.9E-06 47.7 13.5 125 57-184 165-295 (303)
69 PRK13499 rhamnose-proton sympo 95.6 0.28 6.1E-06 49.2 13.7 115 73-188 206-343 (345)
70 COG5006 rhtA Threonine/homoser 95.5 0.088 1.9E-06 50.5 9.4 74 109-182 204-278 (292)
71 PF04657 DUF606: Protein of un 95.5 0.55 1.2E-05 40.9 13.5 127 49-183 7-138 (138)
72 COG2962 RarD Predicted permeas 95.5 0.4 8.7E-06 46.8 13.7 136 201-353 5-144 (293)
73 TIGR00803 nst UDP-galactose tr 95.4 0.039 8.5E-07 51.0 6.6 118 60-181 94-219 (222)
74 PF06800 Sugar_transport: Suga 95.1 0.34 7.5E-06 46.9 12.0 104 73-182 160-267 (269)
75 PRK02971 4-amino-4-deoxy-L-ara 94.6 1.2 2.6E-05 38.4 13.0 34 321-354 88-123 (129)
76 PF06027 DUF914: Eukaryotic pr 94.3 1.1 2.4E-05 44.8 13.7 144 40-189 165-308 (334)
77 PRK10452 multidrug efflux syst 93.2 2.1 4.6E-05 36.5 11.8 35 318-352 68-102 (120)
78 PF10639 UPF0546: Uncharacteri 93.0 0.2 4.4E-06 42.4 5.2 62 122-183 49-111 (113)
79 COG2076 EmrE Membrane transpor 92.8 1.2 2.5E-05 37.4 9.3 69 279-351 32-101 (106)
80 PRK09541 emrE multidrug efflux 92.8 1.1 2.4E-05 37.6 9.4 34 318-351 68-101 (110)
81 PRK10650 multidrug efflux syst 92.6 1.5 3.2E-05 36.8 9.9 64 283-350 41-105 (109)
82 PF05653 Mg_trans_NIPA: Magnes 92.1 1.9 4E-05 42.4 11.5 36 317-352 86-121 (300)
83 PRK11431 multidrug efflux syst 92.0 1.7 3.8E-05 36.2 9.5 65 283-351 35-100 (105)
84 PF06379 RhaT: L-rhamnose-prot 91.7 1.6 3.5E-05 43.6 10.5 142 74-217 30-187 (344)
85 PRK15051 4-amino-4-deoxy-L-ara 91.6 2 4.3E-05 35.9 9.5 32 319-350 74-106 (111)
86 PF04657 DUF606: Protein of un 91.3 7.4 0.00016 33.8 13.1 123 205-349 3-137 (138)
87 KOG1441 Glucose-6-phosphate/ph 86.7 0.42 9E-06 47.4 2.2 63 122-184 243-305 (316)
88 KOG2765 Predicted membrane pro 85.2 1.9 4.2E-05 43.6 6.0 69 119-189 325-393 (416)
89 KOG1580 UDP-galactose transpor 79.1 2.4 5.2E-05 40.6 3.9 63 121-183 248-310 (337)
90 PF05884 ZYG-11_interact: Inte 77.2 79 0.0017 31.2 16.4 127 37-177 94-226 (299)
91 PF00893 Multi_Drug_Res: Small 76.8 33 0.00071 27.5 9.5 26 319-344 68-93 (93)
92 PF04142 Nuc_sug_transp: Nucle 74.9 63 0.0014 30.6 12.4 114 57-175 125-242 (244)
93 COG4975 GlcU Putative glucose 71.3 1.8 4E-05 41.6 1.0 103 78-186 179-285 (288)
94 KOG1444 Nucleotide-sugar trans 66.8 88 0.0019 31.1 11.6 133 209-356 14-152 (314)
95 KOG4314 Predicted carbohydrate 66.5 3.5 7.6E-05 38.5 1.7 41 314-354 86-126 (290)
96 COG4975 GlcU Putative glucose 65.9 0.68 1.5E-05 44.4 -3.1 113 109-222 54-171 (288)
97 PF06379 RhaT: L-rhamnose-prot 61.8 86 0.0019 31.6 10.5 80 107-187 252-341 (344)
98 KOG1583 UDP-N-acetylglucosamin 58.4 49 0.0011 32.6 8.0 49 138-186 266-314 (330)
99 KOG1623 Multitransmembrane pro 55.8 23 0.0005 33.9 5.2 128 125-262 51-183 (243)
100 COG4858 Uncharacterized membra 54.4 75 0.0016 29.5 8.0 63 47-116 102-167 (226)
101 COG5070 VRG4 Nucleotide-sugar 53.3 68 0.0015 30.8 7.8 130 58-187 166-297 (309)
102 KOG1581 UDP-galactose transpor 50.0 20 0.00044 35.5 3.9 73 108-183 238-310 (327)
103 KOG1442 GDP-fucose transporter 42.8 14 0.0003 36.3 1.6 110 73-182 211-323 (347)
104 KOG4026 Uncharacterized conser 42.6 2.9E+02 0.0062 25.9 10.0 60 237-296 108-178 (207)
105 PF10361 DUF2434: Protein of u 39.1 2.3E+02 0.0049 28.0 9.2 90 200-304 46-141 (296)
106 PF11361 DUF3159: Protein of u 38.4 3.2E+02 0.0069 25.1 10.8 50 203-262 25-74 (187)
107 KOG1582 UDP-galactose transpor 37.7 2.7E+02 0.0058 27.6 9.4 128 54-184 198-330 (367)
108 PF05297 Herpes_LMP1: Herpesvi 35.0 13 0.00028 36.6 0.0 129 122-263 32-163 (381)
109 KOG4510 Permease of the drug/m 34.6 11 0.00024 36.9 -0.5 70 117-186 256-325 (346)
110 PF06570 DUF1129: Protein of u 34.3 3.7E+02 0.0079 24.6 11.2 15 153-167 188-202 (206)
111 PF03631 Virul_fac_BrkB: Virul 34.1 3.9E+02 0.0085 24.9 12.0 27 110-136 191-217 (260)
112 COG3238 Uncharacterized protei 33.8 3.4E+02 0.0074 24.1 14.1 55 296-350 75-143 (150)
113 KOG4831 Unnamed protein [Funct 31.1 62 0.0013 27.4 3.4 61 123-183 61-122 (125)
114 PF06912 DUF1275: Protein of u 30.0 4.2E+02 0.009 23.9 14.3 115 42-165 46-160 (209)
115 KOG2922 Uncharacterized conser 28.4 19 0.0004 36.0 -0.1 37 315-351 98-134 (335)
116 COG3238 Uncharacterized protei 27.9 4.4E+02 0.0094 23.5 12.7 70 112-183 70-143 (150)
117 PRK01844 hypothetical protein; 26.2 76 0.0016 24.8 2.9 28 45-72 4-31 (72)
118 PF04342 DUF486: Protein of un 26.1 95 0.0021 26.1 3.7 30 318-347 73-102 (108)
119 PF15108 TMEM37: Voltage-depen 26.1 2.2E+02 0.0047 25.8 6.1 77 173-255 94-170 (184)
120 PF10639 UPF0546: Uncharacteri 25.8 73 0.0016 27.0 3.0 36 314-349 75-110 (113)
121 COG4711 Predicted membrane pro 25.0 5.9E+02 0.013 24.0 9.4 92 159-251 114-208 (217)
122 PF04342 DUF486: Protein of un 24.7 89 0.0019 26.3 3.3 27 154-180 76-102 (108)
123 PF01098 FTSW_RODA_SPOVE: Cell 24.5 1.9E+02 0.0042 28.7 6.4 31 69-99 85-118 (358)
124 PF11293 DUF3094: Protein of u 24.0 1.1E+02 0.0023 22.7 3.2 38 30-67 16-53 (55)
125 COG0341 SecF Preprotein transl 23.7 7.3E+02 0.016 24.6 11.3 91 163-277 129-222 (305)
126 PF07857 DUF1632: CEO family ( 23.5 2.5E+02 0.0055 27.0 6.7 50 204-262 1-51 (254)
127 PF02487 CLN3: CLN3 protein; 22.4 3.6E+02 0.0078 27.8 7.9 33 155-187 77-109 (402)
128 cd06174 MFS The Major Facilita 21.8 6.2E+02 0.013 23.1 18.7 27 48-74 125-151 (352)
129 PRK02237 hypothetical protein; 21.6 1.8E+02 0.0039 24.6 4.5 37 152-188 71-107 (109)
130 PRK00523 hypothetical protein; 21.5 1.1E+02 0.0023 24.0 2.9 28 45-72 5-32 (72)
131 PF09527 ATPase_gene1: Putativ 21.3 1.5E+02 0.0033 21.2 3.6 45 314-358 8-53 (55)
132 PF04246 RseC_MucC: Positive r 20.3 94 0.002 26.4 2.8 38 314-351 73-110 (135)
No 1
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5e-24 Score=207.55 Aligned_cols=298 Identities=15% Similarity=0.176 Sum_probs=235.2
Q ss_pred HHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccC---C-CC-------CCcHHHHH
Q 017963 47 LLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKT---F-PT-------PLDLKLTL 115 (363)
Q Consensus 47 ~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~---~-~~-------~~~~~l~~ 115 (363)
.-.++.+.+.+++++-+++.||-.+.+|.+..-+|.|-.++.-++.++++..+++.|. + .+ ...+...-
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 4455667788999999999999999999999999999999999999999987765321 1 11 11223444
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCC--C
Q 017963 116 AYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDR--Y 193 (363)
Q Consensus 116 ~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~--~ 193 (363)
.+++..++...|| ++..+++++|++|+++..|++...|++|++++++||+++.||.+++++++|+++++.+..+.. .
T Consensus 95 ~~vPa~iYalqNn-l~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~ 173 (345)
T KOG2234|consen 95 VSVPALIYALQNN-LQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK 173 (345)
T ss_pred HHHHHHHHHHhhh-HHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 5666665555555 666999999999999999999999999999999999999999999999999999985554322 2
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhh
Q 017963 194 GNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRS-FHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKT 272 (363)
Q Consensus 194 ~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~-~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~ 272 (363)
++.+..+.+.|+..++++|.++|+ .++.|||+.|+.. -.++.++| +++++.++.+++++.. |++... ..+
T Consensus 174 ~~~~~~n~~~G~~avl~~c~~Sgf----AgvYfEkiLK~s~~s~wi~Niq--L~~~g~~f~~l~~~~~-d~~~i~--~~g 244 (345)
T KOG2234|consen 174 SESSAQNPFLGLVAVLVACFLSGF----AGVYFEKILKGSNVSLWIRNIQ--LYFFGILFNLLTILLQ-DGEAIN--EYG 244 (345)
T ss_pred CCCcccchhhhHHHHHHHHHHHHH----HHHHHHHHHhcCCchHHHHHHH--HHHHHHHHHHHHHhhc-cccccc--cCC
Confidence 245678899999999999999999 8888999998754 35999999 7778899888888877 666554 223
Q ss_pred hcccchhHHHHHHHHHHHHHHHH-HhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 273 FKGGVASYYLVLIWGAITFQLGV-LGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 273 f~~g~~~y~l~lv~tav~~q~~~-lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
|..|. -..+|-.+..++.. +-+.-+.+++|+++++...++.+.+++++++++|+-+++..-.+|..+++.....|
T Consensus 245 ff~G~----s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY 320 (345)
T KOG2234|consen 245 FFYGY----SSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLY 320 (345)
T ss_pred ccccc----cHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHh
Confidence 33443 33555554444432 44666777999999999999999999999999999999999999999999666666
Q ss_pred HhcccCC
Q 017963 352 IYGNSST 358 (363)
Q Consensus 352 ~y~~~~~ 358 (363)
.+..+.|
T Consensus 321 ~~~P~~~ 327 (345)
T KOG2234|consen 321 SLYPARD 327 (345)
T ss_pred hcCCccc
Confidence 5444554
No 2
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.90 E-value=2.6e-21 Score=187.72 Aligned_cols=284 Identities=20% Similarity=0.259 Sum_probs=219.2
Q ss_pred hhhhhHHhHhcCCc-chHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 017963 62 SSLLSRVYYANGGT-SKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPA 140 (363)
Q Consensus 62 ~~Ll~r~y~~~gg~-~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpv 140 (363)
+.+..+....+.++ ..|..|++|.+.-.+...+.....+ ++.+++.+.++. +..+++....+.+-+.+++|+|.
T Consensus 16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~al~~i~~ 90 (303)
T PF08449_consen 16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FPKSRKIPLKKY----AILSFLFFLASVLSNAALKYISY 90 (303)
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccCCCcChHHHH----HHHHHHHHHHHHHHHHHHHhCCh
Confidence 35556666666666 7999999999999988766654332 122222234443 33478888888888899999999
Q ss_pred hHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCC-CCCcchhhhHHHHHHHHHHHHHHHH
Q 017963 141 STAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYG-NITDRQYIMGFVWDILGSALHGLIF 219 (363)
Q Consensus 141 st~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~-~~s~~~~~~G~~l~L~Aa~l~gl~l 219 (363)
+++.++.+++++++|+++++++|||++++++.++++.++|+++...++..++++ +.+..+...|+++.+.+.++.|+..
T Consensus 91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~ 170 (303)
T PF08449_consen 91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTG 170 (303)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988777554332 2222333449999999999999999
Q ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHh--hcccccchhhhhhhcccchhHHHHHHHHHHHHHHHHHh
Q 017963 220 ALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVV--SKDFQGMKSEAKTFKGGVASYYLVLIWGAITFQLGVLG 297 (363)
Q Consensus 220 ~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~--~g~~~~l~~e~~~f~~g~~~y~l~lv~tav~~q~~~lg 297 (363)
...|..+++..++ ..|+.+|.++++.+++.+.... .+|+.+- .++....+.....+..+.++-.++..+
T Consensus 171 ~~qe~~~~~~~~~-----~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~----~~f~~~~p~~~~~l~~~s~~~~~g~~~ 241 (303)
T PF08449_consen 171 VYQEKLFKKYGKS-----PWELMFYTNLFSLPFLLILLFLLPTGEFRSA----IRFISAHPSVLLYLLLFSLTGALGQFF 241 (303)
T ss_pred HHHHHHHHHhCCc-----HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH----HHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 9988888877322 3899999999999998887777 6664322 222112222223344555555555666
Q ss_pred hhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccCCC
Q 017963 298 GTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNSSTP 359 (363)
Q Consensus 298 v~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~~~~ 359 (363)
+..++...+++..+++.+++++++.++++++||+++++.+++|.++++.|...|.+.+++++
T Consensus 242 i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 242 IFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 77778888999999999999999999999999999999999999999999999999887664
No 3
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.87 E-value=1.2e-19 Score=178.58 Aligned_cols=272 Identities=19% Similarity=0.188 Sum_probs=186.0
Q ss_pred CCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhH
Q 017963 73 GGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLV 152 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~ 152 (363)
|=+-+..+|+.-=.-..+...|..+.+ +++++.....++-+.-|++++++-...|++...|++|+++++.+++.++..+
T Consensus 39 ~~~~P~~Qs~~~Y~~l~~vy~~~~~~r-~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~ 117 (334)
T PF06027_consen 39 GVNIPTFQSFFNYVLLALVYTPILLYR-RGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIP 117 (334)
T ss_pred CccCcHHHHHHHHHHHHHHHhhhhhhc-cccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhH
Confidence 555577777766655555545544432 2222211122222334677789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017963 153 FSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGR 232 (363)
Q Consensus 153 Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~ 232 (363)
|++++|++++|+|+++.|+.|+++.+.|.+++...|....+++.++.+...||++++.||++||++-.+ -|+..|+
T Consensus 118 ~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~----~E~~v~~ 193 (334)
T PF06027_consen 118 FVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL----EEKLVKK 193 (334)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH----HHHhccc
Confidence 999999999999999999999999999999887776543333345667899999999999999995555 5666555
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHH
Q 017963 233 RSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGI 312 (363)
Q Consensus 233 ~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~v 312 (363)
.+ ..|+..+.+++++++..+-..+- |++++.. -.|. ++. ...++..+++-.+.+.-+.-+...+|+...|+
T Consensus 194 ~~---~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~--~~w~-~~~--~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nL 264 (334)
T PF06027_consen 194 AP---RVEFLGMLGLFGFIISGIQLAIL-ERSGIES--IHWT-SQV--IGLLVGYALCLFLFYSLVPIVLRMSSATFFNL 264 (334)
T ss_pred CC---HHHHHHHHHHHHHHHHHHHHHhe-ehhhhhc--cCCC-hhh--HHHHHHHHHHHHHHHHHHHHHHHhCccceeeh
Confidence 43 46778888999988877544332 3333411 1221 221 11122222222222211122233555555554
Q ss_pred HHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccCC
Q 017963 313 LNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNSST 358 (363)
Q Consensus 313 i~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~~~ 358 (363)
-....-|.+.+..+++||+++++...+|.++++.|+..|...+.++
T Consensus 265 sLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 265 SLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred HHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 4433447778999999999999999999999999999998776443
No 4
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.86 E-value=1.1e-19 Score=172.11 Aligned_cols=219 Identities=25% Similarity=0.356 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCC
Q 017963 112 KLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSD 191 (363)
Q Consensus 112 ~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~ 191 (363)
|....+++..++++.+|.+...+++++|+++++++.|+++++|++|+++++|+|+++.||.|++++++|+++++.++..+
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 44444556666676666666699999999999999999999999999999999999999999999999999987766432
Q ss_pred C--CC--C----CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017963 192 R--YG--N----ITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRS-FHVVLEQQVMVSLFAFAFTTIGVVVSKD 262 (363)
Q Consensus 192 ~--~~--~----~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~-~~~vle~q~~~~l~a~~~~~vg~~~~g~ 262 (363)
+ ++ + .+..+...|+++++.++.+.|+ .....||+.|+.. ..++.++| .++.+.++..+..... |
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~----agVy~E~~lK~~~~s~~~~N~q--L~~~gi~~~~~~~~~~-~ 167 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGF----AGVYFEKLLKRSNVSLWIQNMQ--LYLFGILFNLLALLLS-D 167 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHH----HHHHHHHHhcccchhHHHHHHH--HHHHHHHHHHHHHhcc-c
Confidence 1 11 1 1245678999999999999999 6666777777654 34777777 5566666666665554 4
Q ss_pred cccchhhhhhhcccchhHHHHHHHHHH-HHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHH
Q 017963 263 FQGMKSEAKTFKGGVASYYLVLIWGAI-TFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSL 341 (363)
Q Consensus 263 ~~~l~~e~~~f~~g~~~y~l~lv~tav-~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~ 341 (363)
++.+.+ +.|.+|. ...+|..+ .+.+..+-+.-+.++++++.+++..++.+.++.++++++||.+++..-.+|.
T Consensus 168 ~~~~~~--~g~f~G~----~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~ 241 (244)
T PF04142_consen 168 GSAISE--SGFFHGY----SWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGA 241 (244)
T ss_pred cccccc--CCchhhc----chHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhe
Confidence 443332 2232332 22344443 3344557777888999999999999999999999999999999999988876
Q ss_pred HH
Q 017963 342 IV 343 (363)
Q Consensus 342 ~l 343 (363)
.+
T Consensus 242 ~~ 243 (244)
T PF04142_consen 242 AL 243 (244)
T ss_pred ec
Confidence 54
No 5
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.85 E-value=1.6e-18 Score=172.66 Aligned_cols=285 Identities=13% Similarity=0.103 Sum_probs=179.8
Q ss_pred chhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017963 59 FPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYL 138 (363)
Q Consensus 59 ~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~yl 138 (363)
..+-..+.|.-++.|=+..-+ .+.-...--+++.|+.+..+ +++++++..++.+....+.|++-...+.++..|++|+
T Consensus 25 ~~~~~~~~k~a~~~G~~~~~~-~~~R~~iA~l~Ll~~~~~~~-~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~t 102 (358)
T PLN00411 25 VVGISTLFKVATSKGLNIYPF-LGYSYLLASLLLLPSLFFTN-RSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYS 102 (358)
T ss_pred HHHHHHHHHHHHHCCCCccHH-HHHHHHHHHHHHHHHHHHHH-HhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 345567888888655555443 34433332333445544321 1111112223333333445655545566777999999
Q ss_pred ChhHHHHHHhhhhHHHHHHHHHH------hcccccHHHHHHHHHHHHHHHHhhccCCCC---------------C-CCCC
Q 017963 139 PASTAALLASSSLVFSTLFGYFL------VKNKLNAAMINAVVIITAAMTIIALDSDSD---------------R-YGNI 196 (363)
Q Consensus 139 pvst~sli~ssql~Ftalfs~~i------lkek~t~~~i~svvllt~Gavll~~~~~~~---------------~-~~~~ 196 (363)
|++.++++.+++|+|++++++++ +|||.++.++.|+++.++|+.++..+++.+ . +...
T Consensus 103 sa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 182 (358)
T PLN00411 103 NPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSS 182 (358)
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCC
Confidence 99999999999999999999999 699999999999999999998876543211 0 0111
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-HHHHhhcc-cccchhhhhhhc
Q 017963 197 TDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTT-IGVVVSKD-FQGMKSEAKTFK 274 (363)
Q Consensus 197 s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~-vg~~~~g~-~~~l~~e~~~f~ 274 (363)
...+..+|+++.++|+++|++|..+.+ |..++++. ...+.+|...++..++. .+...+++ .+... ..+.
T Consensus 183 ~~~~~~lG~~l~l~aa~~wa~~~il~~----~~~~~~~~--~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~ 253 (358)
T PLN00411 183 SNSDWLIGGALLTIQGIFVSVSFILQA----HIMSEYPA--AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI---IHFD 253 (358)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHH----HHHHHcCc--HhHHHHHHHHHHHHHHHHHHHHHccCCcccce---eccc
Confidence 223346799999999999999888854 44333332 23445555555555554 45555532 11110 0110
Q ss_pred c-cchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017963 275 G-GVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 275 ~-g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~ 352 (363)
. .....|..+ .+.+.|.+...++..+.....+++.+ ..|+.+ +++++++||++++.+++|+++++.|+....
T Consensus 254 ~~~~~i~y~~i-~t~lay~lw~~~v~~~ga~~as~~~~-----L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 254 ITLITIVTMAI-ITSVYYVIHSWTVRHKGPLYLAIFKP-----LSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred hHHHHHHHHHH-HHHHHHHHHHHHHhccCchHHHHHHh-----HHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 0 001222323 34556665555655555555555555 778865 999999999999999999999999999988
Q ss_pred hcccCCCC
Q 017963 353 YGNSSTPK 360 (363)
Q Consensus 353 y~~~~~~~ 360 (363)
+++.+|+|
T Consensus 328 ~~~~~~~~ 335 (358)
T PLN00411 328 WGKANEEK 335 (358)
T ss_pred hhhhhhhh
Confidence 77655443
No 6
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.85 E-value=1.1e-18 Score=168.53 Aligned_cols=278 Identities=8% Similarity=0.039 Sum_probs=174.5
Q ss_pred hhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 017963 60 PASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLP 139 (363)
Q Consensus 60 ~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylp 139 (363)
..-.++.|.-.+ +-+-.+..++.|.+.--+...+.... ...++++..++.+...++.|++.+.++.+.+++++|+|
T Consensus 15 ~~~~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s 90 (302)
T TIGR00817 15 VYFNIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSS---GLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVA 90 (302)
T ss_pred HHHHHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHh---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444443333 35778999999976543333222111 11112233455555567779988899999999999999
Q ss_pred hhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHH
Q 017963 140 ASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIF 219 (363)
Q Consensus 140 vst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l 219 (363)
++.++++.+++|+|++++++++.|||++++++.|+++.++|+++...++ . +....|++++++|++++++|.
T Consensus 91 ~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-~--------~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 91 VSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-L--------SFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-c--------cccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997753211 1 124679999999999999977
Q ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhc--cc-chhHHHHHHHHHHHHHHHHH
Q 017963 220 ALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFK--GG-VASYYLVLIWGAITFQLGVL 296 (363)
Q Consensus 220 ~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~--~g-~~~y~l~lv~tav~~q~~~l 296 (363)
.+. ||..+++.+ ..+++..|...++.++++...+..++.+....|..++. .. ...+...+..+...+.....
T Consensus 162 v~~----k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T TIGR00817 162 IFS----KKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQ 236 (302)
T ss_pred HHH----HHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHH
Confidence 765 555441111 13445555555555555533333322222222221110 01 11122112222111111111
Q ss_pred hhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccc
Q 017963 297 GGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNS 356 (363)
Q Consensus 297 gv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~ 356 (363)
-..-.+..+++...++. ....|+.. +++++++||++++.+++|+++++.|...|.+.++
T Consensus 237 ~~~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 237 VAFMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHccCCchHHHHH-hhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 11112334455555655 44667755 8999999999999999999999999988876554
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.80 E-value=2.5e-16 Score=156.21 Aligned_cols=291 Identities=12% Similarity=0.072 Sum_probs=177.2
Q ss_pred HHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHH
Q 017963 47 LLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAA 126 (363)
Q Consensus 47 ~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~ 126 (363)
.+.+.++.--..+.......|.-.+. -+-.|..++.|..---+....+.....+++.+- +..++.+.-.++.|++-..
T Consensus 49 ~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~llp~gl~~~~ 126 (350)
T PTZ00343 49 KLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPRI-KSLKLFLKNFLPQGLCHLF 126 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHHHHHHHH
Confidence 34445555556666677777766554 344899999997743333322221111111111 1122222223444655554
Q ss_pred HHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHH
Q 017963 127 DNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFV 206 (363)
Q Consensus 127 ~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~ 206 (363)
.+.....|++++|++.++++.++.|+||++++++++|||++++++.++++.++|+.+...++. .....|++
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~G~~ 197 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWLAFW 197 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHHHHH
Confidence 455455999999999999999999999999999999999999999999999999988653221 12478999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-HHHHhhcccccchh-------hhhhhcccch
Q 017963 207 WDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTT-IGVVVSKDFQGMKS-------EAKTFKGGVA 278 (363)
Q Consensus 207 l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~-vg~~~~g~~~~l~~-------e~~~f~~g~~ 278 (363)
++++|++.+++|..+.+...++...+.......+...+...++.+.++ +..+.++. .... +...+.....
T Consensus 198 ~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~--~~~~~~~~~~~~~~~~~~~~~ 275 (350)
T PTZ00343 198 CAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGK--KWVPVWTNYTANMTNYTKGII 275 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHhhhcccccchHHH
Confidence 999999999999988766555431110011233444444455554444 22333321 1111 0111111111
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017963 279 SYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPI-TSIAAVILLHDPMSGFKILSLIVTFWGFGSYIY 353 (363)
Q Consensus 279 ~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv-~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y 353 (363)
.| .++.+.+.+.+......-....++.+..++... ..|+ +.+++++++||+++..+++|.++++.|+..|.+
T Consensus 276 l~--~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~-lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~ 348 (350)
T PTZ00343 276 IF--KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANT-LKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL 348 (350)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH-HHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence 11 233344444443322222333445555665555 5566 559999999999999999999999999988754
No 8
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.78 E-value=6e-16 Score=145.14 Aligned_cols=253 Identities=18% Similarity=0.118 Sum_probs=160.8
Q ss_pred hhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 017963 65 LSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAA 144 (363)
Q Consensus 65 l~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~s 144 (363)
..|+..++ ....+..++.+...-++++.|.+.. + +++...++. ....++....++.+|.+|++|+|++..+
T Consensus 7 ~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~----~-~~~~~~~~~---~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 7 VIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRR----R-PPLKRLLRL---LLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred HHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHh----c-cCHhHHHHH---HHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 34554444 3455566666655545555555432 1 111111222 2333445778888998999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017963 145 LLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSEL 224 (363)
Q Consensus 145 li~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~ 224 (363)
++.+++|+++++++.+++|||++++++.++++.++|++++..+++. +.+..|+.+.+.|++.|+.+..+.
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--------~~~~~G~~~~l~a~~~~a~~~~~~-- 147 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--------SINPAGLLLGLGSGISFALGTVLY-- 147 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc--------cccHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999887543311 235789999999999999977774
Q ss_pred HHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 017963 225 VFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYYLVLIWGAITFQLGVLGGTAVLFL 304 (363)
Q Consensus 225 ~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~glv~~ 304 (363)
||..++.+... ..+..+...++.+++..-....++.+.. +.+++ ....+..++.+.+.+.+...++.....
T Consensus 148 --k~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~- 218 (260)
T TIGR00950 148 --KRLVKKEGPEL-LQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQW---GALLYLGLIGTALAYFLWNKGLTLVDP- 218 (260)
T ss_pred --hHHhhcCCchH-HHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCc-
Confidence 55543333221 1222234455555554333333322211 11111 112223455566666666555433333
Q ss_pred hhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHH
Q 017963 305 ASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGF 348 (363)
Q Consensus 305 ~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~ 348 (363)
-.++.+.....+++.+++++++||++++.+++|.++++.|.
T Consensus 219 ---~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 219 ---SAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 23333333333445699999999999999999999999875
No 9
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.76 E-value=2.4e-15 Score=145.53 Aligned_cols=219 Identities=15% Similarity=0.225 Sum_probs=150.1
Q ss_pred HHHH-HHHHHHHHHhhcc-CChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCc
Q 017963 121 GFLS-AADNLMYAYAYAY-LPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITD 198 (363)
Q Consensus 121 Gll~-~~~n~ly~~gL~y-lpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~ 198 (363)
|+.. ..+..++..+++| +|++.++++.+++|+++++++++++|||++++++.++++.++|+.++..++.++ .
T Consensus 65 g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~ 138 (299)
T PRK11453 65 GLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------Q 138 (299)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------c
Confidence 4433 3444456688888 699999999999999999999999999999999999999999998875432111 1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-HHHHhhcccccchhhhhhhccc-
Q 017963 199 RQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTT-IGVVVSKDFQGMKSEAKTFKGG- 276 (363)
Q Consensus 199 ~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~-vg~~~~g~~~~l~~e~~~f~~g- 276 (363)
.....|+++++.|+++|++|..+. ||..++.+....+.++++..+++..++. .+...+++. ....+...+...
T Consensus 139 ~~~~~G~~l~l~aal~~a~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 213 (299)
T PRK11453 139 HVAMLGFMLTLAAAFSWACGNIFN----KKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSA-TMIHSLVTIDMTT 213 (299)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH----HHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCch-hhhhhhccCCHHH
Confidence 123579999999999999988886 4443333333455666677766665554 343444321 111100111100
Q ss_pred -chhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017963 277 -VASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYIYG 354 (363)
Q Consensus 277 -~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~ 354 (363)
...-|+.++.+++.|.+...++..+.....+.+ +...|+.+ +++++++||+++..+++|+++++.|...-.++
T Consensus 214 ~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~-----~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 214 ILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPL-----SLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH-----HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 112233567777777777666555544323332 23558855 99999999999999999999999999887776
Q ss_pred c
Q 017963 355 N 355 (363)
Q Consensus 355 ~ 355 (363)
+
T Consensus 289 ~ 289 (299)
T PRK11453 289 L 289 (299)
T ss_pred h
Confidence 6
No 10
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=6.7e-18 Score=159.61 Aligned_cols=264 Identities=15% Similarity=0.229 Sum_probs=196.3
Q ss_pred HHHHHHHhhhhHHHHHHHhhccccccCCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHH
Q 017963 78 WIISWVAVAGWPLTALILLPTYFVFKTFPT-PLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTL 156 (363)
Q Consensus 78 w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~-~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftal 156 (363)
=+.|+.|......--+++. ... .+.+++ |...+...+ +.+-.....||+.+.+. +|...+.++++..++.||+
T Consensus 34 NLITFaqFlFia~eGlif~-skf-~~~k~kiplk~Y~i~V-~mFF~vnv~NN~al~f~---I~~PlHiIfRsgsll~nM~ 107 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFT-SKF-FTVKPKIPLKDYAITV-AMFFIVNVTNNYALKFN---IPMPLHIIFRSGSLLANMI 107 (330)
T ss_pred eehHHHHHHHHHHhceeee-ccc-cccCCCCchhhhheeh-heeeeeeeeccceeeec---ccceEEEEEecCcHHHHHH
Confidence 6889999887777655444 111 112233 433333323 22333455566544333 5788899999999999999
Q ss_pred HHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCC------CCC----CcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017963 157 FGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRY------GNI----TDRQYIMGFVWDILGSALHGLIFALSELVF 226 (363)
Q Consensus 157 fs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~------~~~----s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~ 226 (363)
.+++++|+|++.+|+.|+++.|+|+++-.+.++.|.. +.+ +.....+|+.+...|.++.+...+..|.+|
T Consensus 108 ~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y 187 (330)
T KOG1583|consen 108 LGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTY 187 (330)
T ss_pred HHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998876555543321 111 122346899999999999999999999999
Q ss_pred HHhhccccchhHHHHHHHHHHHHHHHHHH-HHHhhcccccchh----hhhhhcccchhHHHHHHHHHHHHHHHHHhhhhh
Q 017963 227 VKLVGRRSFHVVLEQQVMVSLFAFAFTTI-GVVVSKDFQGMKS----EAKTFKGGVASYYLVLIWGAITFQLGVLGGTAV 301 (363)
Q Consensus 227 kkv~~~~~~~~vle~q~~~~l~a~~~~~v-g~~~~g~~~~l~~----e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~gl 301 (363)
||++|+ .-|..+|.++...+.+++ +.=+..+|..... +.+...--.+.-+..+..+.+++..|.-|+.-+
T Consensus 188 ~kyGKh-----~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L 262 (330)
T KOG1583|consen 188 QKYGKH-----WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYIL 262 (330)
T ss_pred HHhcCC-----hHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999876 489999999999988874 2222222322111 011111112455566889999999999999999
Q ss_pred hhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017963 302 LFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 302 v~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~ 352 (363)
...++||..+++.++++-++.+++++.|.++|+++.++|.++++.|...|.
T Consensus 263 ~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 263 TTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred hceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999993
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.75 E-value=8e-15 Score=141.39 Aligned_cols=280 Identities=15% Similarity=0.096 Sum_probs=176.0
Q ss_pred hhHHHHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHH
Q 017963 43 SHWILLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGF 122 (363)
Q Consensus 43 ~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gl 122 (363)
|..+-++...+.+.+=-....+..|.-.+ +-+.+..++.....--++++|++... +++ . .+++.+......|.
T Consensus 4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~---~~~-~-~~~~~~~~~~~~g~ 76 (292)
T PRK11272 4 RQLLPLFGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLR---GHP-L-PTLRQWLNAALIGL 76 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHh---CCC-C-CcHHHHHHHHHHHH
Confidence 33444455555555555667778886554 55667777777776555555655421 111 1 12333333455666
Q ss_pred HH-HHHHHHHHHhh-ccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcch
Q 017963 123 LS-AADNLMYAYAY-AYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQ 200 (363)
Q Consensus 123 l~-~~~n~ly~~gL-~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~ 200 (363)
+. ...+.++.++. +++|++.++++..++|+++++++.+ +|||++++++.|+++.++|+.++..+++. +.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------~~ 147 (292)
T PRK11272 77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------SG 147 (292)
T ss_pred HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------cc
Confidence 54 45566777888 9999999999999999999999986 69999999999999999998887543221 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-HHHHhhcccccchhhhhhhcccchh
Q 017963 201 YIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTT-IGVVVSKDFQGMKSEAKTFKGGVAS 279 (363)
Q Consensus 201 ~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~-vg~~~~g~~~~l~~e~~~f~~g~~~ 279 (363)
...|+++.++|+++|++|... .||..++++ ....-+|. .++...+. .....++++... .+.+.+ ...
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~----~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~i 215 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVW----SSRLPLPVG-MMAGAAEM---LAAGVVLLIASLLSGERLTAL-PTLSGF---LAL 215 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHH----HHhcCCCcc-hHHHHHHH---HHHHHHHHHHHHHcCCccccc-CCHHHH---HHH
Confidence 457999999999999997766 455533322 22222332 33333222 332222222111 111111 112
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcc
Q 017963 280 YYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYIYGN 355 (363)
Q Consensus 280 y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~ 355 (363)
.++.++.+++.+.+...++..+.....+++ ...-|+.+ +++++++||+++..+++|.++++.|.......+
T Consensus 216 ~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-----~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 216 GYLAVFGSIIAISAYMYLLRNVRPALATSY-----AYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-----HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 333556677777666665443333222222 22457755 999999999999999999999999987765543
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.69 E-value=2.3e-14 Score=138.60 Aligned_cols=210 Identities=9% Similarity=0.040 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 017963 118 IVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNIT 197 (363)
Q Consensus 118 ~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s 197 (363)
...++..+.++.+|.+|++++|++.++++..+.|+++++++++++|||++++++.++++.++|++++..++ ++
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~-~~------ 149 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF-GS------ 149 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc-CC------
Confidence 34566688899999999999999999999999999999999999999999999999999999998875332 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccc
Q 017963 198 DRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGV 277 (363)
Q Consensus 198 ~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~ 277 (363)
. ....++|+++|++|..+. ||..++... .......|...++.+. .... ...+...... ..+. ..
T Consensus 150 ---~---~~~~l~aa~~~a~~~i~~----r~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~--~~~~-~~ 213 (296)
T PRK15430 150 ---L---PIIALGLAFSFAFYGLVR----KKIAVEAQT-GMLIETMWLLPVAAIY-LFAI-ADSSTSHMGQ--NPMS-LN 213 (296)
T ss_pred ---c---cHHHHHHHHHHHHHHHHH----HhcCCCCch-hHHHHHHHHHHHHHHH-HHHH-ccCCcccccC--CcHH-HH
Confidence 0 145777899999988763 444222222 1222223333333222 1111 1111100000 0010 00
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHH-HHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcc
Q 017963 278 ASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPIT-SIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGN 355 (363)
Q Consensus 278 ~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~-~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~ 355 (363)
..++...+.+.+.+.+...+.........+++.. ..|+. .+++++++||++++.+.+|+++++.|......+.
T Consensus 214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~-----l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQY-----IGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH-----HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222345566666555544444443333333 55774 4999999999999999999999999988886554
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.67 E-value=2.6e-13 Score=131.03 Aligned_cols=255 Identities=11% Similarity=0.060 Sum_probs=158.7
Q ss_pred hhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 017963 65 LSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAA 144 (363)
Q Consensus 65 l~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~s 144 (363)
..|+-+++ -..+...+.....--+++.+++. +++.+ ..+|........|+..+..+.++.++++|+|++.++
T Consensus 30 ~~K~~~~~--~~~~~~~~~R~~~a~l~l~~~~~---~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~ 101 (293)
T PRK10532 30 LAKSLFPL--VGAPGVTALRLALGTLILIAIFK---PWRLR---FAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAV 101 (293)
T ss_pred HHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHh---HHhcc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 57766664 44455666665554444444432 11111 112222223445777788888888999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017963 145 LLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSEL 224 (363)
Q Consensus 145 li~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~ 224 (363)
++..++|+++++++ +||.++. .++.+..+|+.++...+.+ .+.....|+++.++|+++|+.|..+.
T Consensus 102 ~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~------~~~~~~~G~ll~l~aa~~~a~~~v~~-- 167 (293)
T PRK10532 102 ALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQD------VSHVDLTGAALALGAGACWAIYILSG-- 167 (293)
T ss_pred HHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCC------cccCChHHHHHHHHHHHHHHHHHHHH--
Confidence 99999999999887 3665544 4566778898776432211 11224679999999999999988775
Q ss_pred HHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 017963 225 VFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYYLVLIWGAITFQLGVLGGTAVLFL 304 (363)
Q Consensus 225 ~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~glv~~ 304 (363)
||..++++...+ .+..+++..++.......++ ....+...+ ...-++.++.+++.|.+...++......
T Consensus 168 --r~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~---~~~l~lgv~~t~~~~~l~~~~~~~~~a~ 236 (293)
T PRK10532 168 --QRAGAEHGPATV----AIGSLIAALIFVPIGALQAG--EALWHWSIL---PLGLAVAILSTALPYSLEMIALTRLPTR 236 (293)
T ss_pred --HHHhccCCchHH----HHHHHHHHHHHHHHHHHccC--cccCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 555444332222 23334444433322222221 111111111 0123556778888887777775555554
Q ss_pred hhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccC
Q 017963 305 ASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNSS 357 (363)
Q Consensus 305 ~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~~ 357 (363)
..+++.. ..|+.+ +++++++||++++.+++|+++++.|...+...+-+
T Consensus 237 ~as~~~~-----l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 237 TFGTLMS-----MEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHH-----hHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3333333 567755 99999999999999999999999999988655533
No 14
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.66 E-value=1.2e-13 Score=133.60 Aligned_cols=214 Identities=12% Similarity=0.027 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHhhc----cCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCC-
Q 017963 121 GFLSAADNLMYAYAYA----YLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGN- 195 (363)
Q Consensus 121 Gll~~~~n~ly~~gL~----ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~- 195 (363)
++....++.++..++. .+|++..+++.+++|+|+++++++++|||++++++.++++.++|++++..++.+.+..+
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 147 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAEL 147 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhh
Confidence 4445566665555654 47888899999999999999999999999999999999999999988765432111000
Q ss_pred -CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhc
Q 017963 196 -ITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFK 274 (363)
Q Consensus 196 -~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~ 274 (363)
.+..+...|+++.+.|+++|++|..+. ||..++.+.. .+.. ..+.+.+......++++ ...-+.+.+
T Consensus 148 ~~~~~~~~~G~~~~l~aa~~~A~~~v~~----k~~~~~~~~~---~~~~---~~~~~~l~~~~~~~~~~-~~~~~~~~~- 215 (295)
T PRK11689 148 INNIASNPLSYGLAFIGAFIWAAYCNVT----RKYARGKNGI---TLFF---ILTALALWIKYFLSPQP-AMVFSLPAI- 215 (295)
T ss_pred hhccccChHHHHHHHHHHHHHHHHHHHH----hhccCCCCch---hHHH---HHHHHHHHHHHHHhcCc-cccCCHHHH-
Confidence 111234579999999999999988875 5554443322 2221 11222222222233322 111111111
Q ss_pred ccchhHHH-HHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017963 275 GGVASYYL-VLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 275 ~g~~~y~l-~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~ 352 (363)
.+.. ..+.+.+.|.+...++........+++.+ ..|+.+ +++++++||+++..+++|+++++.|.....
T Consensus 216 ----~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~-----l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 216 ----IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASY-----FTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH-----hHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 1111 11245555555555544444433333333 567755 999999999999999999999999987764
Q ss_pred hcc
Q 017963 353 YGN 355 (363)
Q Consensus 353 y~~ 355 (363)
..+
T Consensus 287 ~~~ 289 (295)
T PRK11689 287 LAT 289 (295)
T ss_pred hhH
Confidence 433
No 15
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.65 E-value=7.3e-15 Score=144.10 Aligned_cols=234 Identities=15% Similarity=0.197 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCC
Q 017963 112 KLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSD 191 (363)
Q Consensus 112 ~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~ 191 (363)
+..-++..+..+..+-|+.|+.+|+|+++++.+++.++.-.||..++.++..||+|..|+.++.+.+.|++++..+++.+
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 44555777889999999999999999999999999999999999999999999999999999999999998887766533
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHH---HHHhhcc--cccc
Q 017963 192 RYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTI---GVVVSKD--FQGM 266 (363)
Q Consensus 192 ~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~v---g~~~~g~--~~~l 266 (363)
.++....+..+|+++++.+|++||+|..+ .||-..++. .=+++|.+.++++..=+++ .+++-.- ++..
T Consensus 237 -~~~~~a~~~llG~llaL~sA~~YavY~vl----lk~~~~~eg--~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F 309 (416)
T KOG2765|consen 237 -NSDLPASRPLLGNLLALLSALLYAVYTVL----LKRKIGDEG--ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF 309 (416)
T ss_pred -cccCCccchhHHHHHHHHHHHHHHHHHHH----HHhhccccc--ccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc
Confidence 23445677899999999999999999998 455444441 1356677777666543332 2222111 1111
Q ss_pred hhhhhhhcccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHH
Q 017963 267 KSEAKTFKGGVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFW 346 (363)
Q Consensus 267 ~~e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~ 346 (363)
|...-.+...-....++.|+++=.++..+ ..++|++.+.+-+++-+|+..+.-+++=|.++++..++|.+.++.
T Consensus 310 --~lP~~~q~~~vv~~~ligtvvSDylW~~a----~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv 383 (416)
T KOG2765|consen 310 --ELPSSTQFSLVVFNNLIGTVVSDYLWAKA----VLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFV 383 (416)
T ss_pred --cCCCCceeEeeeHhhHHHHHHHHHHHHHH----HHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 11111111112223477777765554444 345688888888999999999999998899999999999999999
Q ss_pred HHHHHHhcccCC
Q 017963 347 GFGSYIYGNSST 358 (363)
Q Consensus 347 G~~~y~y~~~~~ 358 (363)
||..-.|....+
T Consensus 384 ~Fv~vn~~~~~~ 395 (416)
T KOG2765|consen 384 GFVIVNISSENS 395 (416)
T ss_pred HHhheecccccc
Confidence 999987765433
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.65 E-value=1.2e-13 Score=132.33 Aligned_cols=214 Identities=12% Similarity=0.023 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 017963 116 AYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGN 195 (363)
Q Consensus 116 ~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~ 195 (363)
..+..|+..+..+.++..++++.|++..+.+..++|+++++++++++|||++++++.|+++.+.|+.++..+++.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~---- 140 (281)
T TIGR03340 65 LLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ---- 140 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc----
Confidence 3455666778888888899999999999999999999999999999999999999999999999998876543211
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-hhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhc
Q 017963 196 ITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSF-HVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFK 274 (363)
Q Consensus 196 ~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~-~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~ 274 (363)
....|+.+.+.++++|++|..+. ||..++.+. ........+.......++..-....++ +....+...
T Consensus 141 ----~~~~g~~~~l~aal~~a~~~i~~----k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-- 209 (281)
T TIGR03340 141 ----HRRKAYAWALAAALGTAIYSLSD----KAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG-RSMFPYARQ-- 209 (281)
T ss_pred ----cchhHHHHHHHHHHHHHHhhhhc----cccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc-cchhhhHHH--
Confidence 12358888999999999988764 333221111 111111222222221222221111222 111110000
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017963 275 GGVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGS 350 (363)
Q Consensus 275 ~g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~ 350 (363)
.. ..-+...+.+.+.|.+...++...-....+.+.+ ..|+.. +++++++||+++..+++|+++++.|...
T Consensus 210 ~~-~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~-----l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 210 IL-PSATLGGLMIGGAYALVLWAMTRLPVATVVALRN-----TSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecc-----cHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 00 1122334555566655554433332221111222 347754 9999999999999999999999999764
No 17
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.55 E-value=2.6e-11 Score=113.76 Aligned_cols=210 Identities=19% Similarity=0.223 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHH-HHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 017963 118 IVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGY-FLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNI 196 (363)
Q Consensus 118 ~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~-~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~ 196 (363)
+..++..+..+.+|..+++|+|++.++++.++.|+++++++. +++|||+++.++.++++.+.|+.++..++..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~---- 149 (292)
T COG0697 74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG---- 149 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch----
Confidence 344566888889999999999999999999999999999996 777999999999999999999999866654421
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH-HHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcc
Q 017963 197 TDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLE-QQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKG 275 (363)
Q Consensus 197 s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle-~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~ 275 (363)
.. +..|+.+.+.+++.++++.... |++. +.+.....- ++. . ............ +.+ .+.+...+
T Consensus 150 -~~-~~~g~~~~l~a~~~~a~~~~~~----~~~~-~~~~~~~~~~~~~---~-~~~~~~~~~~~~-~~~-~~~~~~~~-- 214 (292)
T COG0697 150 -IL-SLLGLLLALAAALLWALYTALV----KRLS-RLGPVTLALLLQL---L-LALLLLLLFFLS-GFG-APILSRAW-- 214 (292)
T ss_pred -hH-HHHHHHHHHHHHHHHHHHHHHH----HHhc-CCChHHHHHHHHH---H-HHHHHHHHHHhc-ccc-ccCCHHHH--
Confidence 01 6899999999999999966664 5443 222111111 221 1 111111111111 111 11111111
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHH--hhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017963 276 GVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNA--IRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 276 g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~--~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~ 352 (363)
...-+..++.+.+.+.+...++.... +..+.. ...|+.+ +.+++++||+++..+.+|.++++.|.....
T Consensus 215 -~~~~~~g~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 215 -LLLLYLGVFSTGLAYLLWYYALRLLG-------ASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcC-------chHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 00111122233233333333321111 222211 3457755 669999999999999999999999998887
Q ss_pred hc
Q 017963 353 YG 354 (363)
Q Consensus 353 y~ 354 (363)
+.
T Consensus 287 ~~ 288 (292)
T COG0697 287 LR 288 (292)
T ss_pred cc
Confidence 66
No 18
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.47 E-value=3.1e-11 Score=113.93 Aligned_cols=146 Identities=11% Similarity=0.050 Sum_probs=101.2
Q ss_pred hhhhhhhHHhHhcCCcchHHHHHHHhh-hhHHHHHHHhhcccccc---CCCCCC-cHHHHHHHHHHHHHHHHHHHHHHHh
Q 017963 60 PASSLLSRVYYANGGTSKWIISWVAVA-GWPLTALILLPTYFVFK---TFPTPL-DLKLTLAYIVLGFLSAADNLMYAYA 134 (363)
Q Consensus 60 ~~~~Ll~r~y~~~gg~~~w~~t~vq~a-g~p~l~~p~~~~~~~~~---~~~~~~-~~~l~~~~~~~Gll~~~~n~ly~~g 134 (363)
....+..|+. . +-+.+..++.... +.+++ .++...+++++ ++.++. .++........|+..+.++.+|.++
T Consensus 15 g~~~~~~k~~--~-~~~~~~i~~~R~~~a~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a 90 (256)
T TIGR00688 15 GYMYYYSKLL--K-PLPATDILGHRMIWSFPFM-LLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWA 90 (256)
T ss_pred HHHHHHHHHh--c-cCCHHHHHHHHHHHHHHHH-HHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667752 2 2555666666654 34433 34332222111 111111 2222333456688889999999999
Q ss_pred hccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHH
Q 017963 135 YAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSAL 214 (363)
Q Consensus 135 L~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l 214 (363)
++|+|+++++++.++.|+|+++++.+++|||++++++.++++.++|++++..++ ++ .. .+.++++++
T Consensus 91 ~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~-~~--------~~----~~~l~aa~~ 157 (256)
T TIGR00688 91 VNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK-GS--------LP----WEALVLAFS 157 (256)
T ss_pred HHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc-CC--------ch----HHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998875432 11 01 357889999
Q ss_pred HHHHHHHH
Q 017963 215 HGLIFALS 222 (363)
Q Consensus 215 ~gl~l~l~ 222 (363)
|++|....
T Consensus 158 ~a~~~i~~ 165 (256)
T TIGR00688 158 FTAYGLIR 165 (256)
T ss_pred HHHHHHHH
Confidence 99988774
No 19
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.37 E-value=7.9e-11 Score=113.38 Aligned_cols=224 Identities=20% Similarity=0.255 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 017963 117 YIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNI 196 (363)
Q Consensus 117 ~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~ 196 (363)
.++.|+..+.|-.+-++++.|.|+|.|+...++.++|..+||.++--||+++.-...+.+...|..+....+.+
T Consensus 87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq------ 160 (349)
T KOG1443|consen 87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ------ 160 (349)
T ss_pred hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc------
Confidence 35668899999999999999999999999999999999999999999999999999999988888887666543
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhh-hhhh
Q 017963 197 TDRQYIMGFVWDILGSALHGLIFALSELVFVKLV--GRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSE-AKTF 273 (363)
Q Consensus 197 s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~--~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e-~~~f 273 (363)
=...|+.++++|+++.|+-++..|...+|-- ++.+..++..+|-++++ ..+..++..||.......+ .+.+
T Consensus 161 ---f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~---~Ll~~~l~fEG~~~~~~s~~f~~~ 234 (349)
T KOG1443|consen 161 ---FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI---GLLPLSLLFEGLHLITSSSIFRFQ 234 (349)
T ss_pred ---eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH---HHHHHHHHHcccccchhhhHHHhc
Confidence 2588999999999999999999999998853 45566777777755543 3444677788864433222 2222
Q ss_pred cccchhHHHHHH--HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 274 KGGVASYYLVLI--WGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 274 ~~g~~~y~l~lv--~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
..+...-++..+ +...++.. -..-.-+...+++++.++.-..--..+.++|++..+|.++...+.|+.+++.|...|
T Consensus 235 d~~~~~rv~g~i~l~g~laF~l-~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 235 DTGLILRVIGLISLGGLLAFLL-EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred CccHHHHHHHHHHHHHHHHHHH-HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 222221111111 11111111 011122333455666555544444556688899999999999999999999999998
Q ss_pred Hh
Q 017963 352 IY 353 (363)
Q Consensus 352 ~y 353 (363)
-+
T Consensus 314 ~~ 315 (349)
T KOG1443|consen 314 RN 315 (349)
T ss_pred cc
Confidence 33
No 20
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.34 E-value=8.8e-10 Score=106.81 Aligned_cols=222 Identities=14% Similarity=0.148 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHh-hhhHHHHHHHHHHhcccccHHH----HHHHHHHHHHHHHhh
Q 017963 111 LKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLAS-SSLVFSTLFGYFLVKNKLNAAM----INAVVIITAAMTIIA 185 (363)
Q Consensus 111 ~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~s-sql~Ftalfs~~ilkek~t~~~----i~svvllt~Gavll~ 185 (363)
++.+..++..|+..+..|+.|..+.+|+.++++..+.+ .|++++++++.+++|||.|+++ +.|+++..+|+++++
T Consensus 56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~ 135 (290)
T TIGR00776 56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS 135 (290)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence 67777789999999999999999999999999999999 9999999999999999999999 999999999998886
Q ss_pred ccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 017963 186 LDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQG 265 (363)
Q Consensus 186 ~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~ 265 (363)
.+++++.. +.+..++..|.++.+.+++.|++|....+.. + ++.....-.|.+.-+++........ . +.+.
T Consensus 136 ~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-----~-~~~~~~~~~~~~g~~~~~~~~~~~~-~--~~~~ 205 (290)
T TIGR00776 136 RSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-----G-VDGLSVLLPQAIGMVIGGIIFNLGH-I--LAKP 205 (290)
T ss_pred eccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-----C-CCcceehhHHHHHHHHHHHHHHHHH-h--cccc
Confidence 65433211 0111234569999999999999999997532 2 2211121123332222222222111 1 1011
Q ss_pred chhhhhhhcccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHH----HH
Q 017963 266 MKSEAKTFKGGVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKI----LS 340 (363)
Q Consensus 266 l~~e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~----ig 340 (363)
...+ ..+ ......++| .+.+.....+..+ ....-.+.+++... |+++ +.+++++||+.+..+. +|
T Consensus 206 ~~~~-~~~----~~~~~Gi~~-~ia~~~y~~~~~~---~~~~~~~~~ls~~~-pvia~~~~v~~l~E~~~~~~~~~~~iG 275 (290)
T TIGR00776 206 LKKY-AIL----LNILPGLMW-GIGNFFYLFSAQP---KVGVATSFSLSQLG-VIISTLGGILILGEKKTKREMIAISVG 275 (290)
T ss_pred hHHH-HHH----HHHHHHHHH-HHHHHHHHHHccc---ccchhhHHHHHHHH-HHHHHHHHHHHhccCCCcceeehhHHH
Confidence 1110 000 011112222 4444444455442 11222244444444 6654 9999999999999999 99
Q ss_pred HHHHHHHHHHHH
Q 017963 341 LIVTFWGFGSYI 352 (363)
Q Consensus 341 ~~lvl~G~~~y~ 352 (363)
.++++.|...-.
T Consensus 276 ~~lIi~~~~l~~ 287 (290)
T TIGR00776 276 IILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHh
Confidence 999998877643
No 21
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.34 E-value=2.4e-10 Score=109.60 Aligned_cols=217 Identities=15% Similarity=0.112 Sum_probs=148.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCC
Q 017963 110 DLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSD 189 (363)
Q Consensus 110 ~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~ 189 (363)
.+|.+....+.+++++.|-++|.++.+.=-+-.+|+=+-..|+++.+++.+++|||+++.|+.+++++++|+....++.+
T Consensus 68 ~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g 147 (293)
T COG2962 68 QPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG 147 (293)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 34666777889999999999999999987777889999999999999999999999999999999999999998888776
Q ss_pred CCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chhHHHHHHHHHHHHHHHHHHHHHhhccccc-ch
Q 017963 190 SDRYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRS-FHVVLEQQVMVSLFAFAFTTIGVVVSKDFQG-MK 267 (363)
Q Consensus 190 ~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~-~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~-l~ 267 (363)
+-. ..+++=|..||+|..+ ||..+-.. ....+|+... .+++++.++...|-++ ..
T Consensus 148 ~lp-------------wval~la~sf~~Ygl~-----RK~~~v~a~~g~~lE~l~l-----~p~al~yl~~l~~~~~~~~ 204 (293)
T COG2962 148 SLP-------------WVALALALSFGLYGLL-----RKKLKVDALTGLTLETLLL-----LPVALIYLLFLADSGQFLQ 204 (293)
T ss_pred CCc-------------HHHHHHHHHHHHHHHH-----HHhcCCchHHhHHHHHHHH-----hHHHHHHHHHHhcCchhhh
Confidence 531 3445557889999988 55545432 2355565532 3344444443333221 11
Q ss_pred -hhhhhhcccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHH-HHHHHHHhCCCCchhHHHHHHHHH
Q 017963 268 -SEAKTFKGGVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPIT-SIAAVILLHDPMSGFKILSLIVTF 345 (363)
Q Consensus 268 -~e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~-~ilAvl~f~d~~~~~k~ig~~lvl 345 (363)
.+...+ ....+.=..|++.-.++..+...+...+-.++.+ .=|.. -++|+++|||+++..|.++-+.+-
T Consensus 205 ~~~~~~~----~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqY-----i~Ptl~fllav~i~~E~~~~~~~~~F~~IW 275 (293)
T COG2962 205 QNANSLW----LLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQY-----IEPTLMFLLAVLIFGEPFDSDQLVTFAFIW 275 (293)
T ss_pred cCCchHH----HHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHH-----HHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 111011 0111122244444444444433333332233333 33664 499999999999999999999999
Q ss_pred HHHHHHHhcccCC
Q 017963 346 WGFGSYIYGNSST 358 (363)
Q Consensus 346 ~G~~~y~y~~~~~ 358 (363)
.|.+.|......+
T Consensus 276 ~aL~l~~~d~l~~ 288 (293)
T COG2962 276 LALALFSIDGLYT 288 (293)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998887433
No 22
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.31 E-value=7.2e-11 Score=102.30 Aligned_cols=150 Identities=17% Similarity=0.206 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhc--c-cchhH
Q 017963 204 GFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFK--G-GVASY 280 (363)
Q Consensus 204 G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~--~-g~~~y 280 (363)
|+++++.|+++.+++..+.|..+++..++......++++.+.+..+++.+....+..++++..+...+... . .....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999998888875333344568999999999999999977666655443332222111 1 13355
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017963 281 YLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIY 353 (363)
Q Consensus 281 ~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y 353 (363)
...++.+.+.+.+.-+....++..+|++..+++..+..+++.++++++|||++|..+++|.++++.|...|.|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5567788888888888899999999999999999999999999999999999999999999999999999976
No 23
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.31 E-value=2.5e-10 Score=108.41 Aligned_cols=293 Identities=14% Similarity=0.198 Sum_probs=214.7
Q ss_pred CCchhHHHHHHHHHHHHhcchhhhhhhHHhHhcCCcc--hHHHHHHHhhhhHHHHHHHhhcccc-ccCCCCC-CcHHHHH
Q 017963 40 KPISHWILLVLSSAAMLVAFPASSLLSRVYYANGGTS--KWIISWVAVAGWPLTALILLPTYFV-FKTFPTP-LDLKLTL 115 (363)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~--~w~~t~vq~ag~p~l~~p~~~~~~~-~~~~~~~-~~~~l~~ 115 (363)
.++.+|.--.+|+.-...+--.-.-+..+-|+..|=+ -|-.|++|..--... .+.+++ -+.+++- ++|.
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~----glie~~~~~~k~r~iP~rt--- 108 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGF----GLIELQLIQTKRRVIPWRT--- 108 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhh----hheEEEeecccceecchhH---
Confidence 4556788888888888888888888899999987776 599999997654332 222222 1233331 2332
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 017963 116 AYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGN 195 (363)
Q Consensus 116 ~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~ 195 (363)
|..+..++.....+-+-++.|+.-.+-.++.+++++=+++.+.++-++|+.+.-..+..++.+|.++-.+.|+.-
T Consensus 109 -Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~---- 183 (367)
T KOG1582|consen 109 -YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT---- 183 (367)
T ss_pred -hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc----
Confidence 333345555566677789999999999999999999999999999999999999999999999988877666542
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhccc-ccchhhhhhhc
Q 017963 196 ITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDF-QGMKSEAKTFK 274 (363)
Q Consensus 196 ~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~-~~l~~e~~~f~ 274 (363)
+..=..+|..+.-+|-.+=|++.=+.|..+|+.. .. -+||.+|...++.++..+.+...||. +.+..-+ +
T Consensus 184 -sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~-~s----s~EmvfySy~iG~vflf~~mvlTge~f~a~~fca---e 254 (367)
T KOG1582|consen 184 -SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNP-AS----SSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCA---E 254 (367)
T ss_pred -CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCC-CC----cceEEEeeecccHHHHHHHHHhcccchhhhHHHH---h
Confidence 2334578999999999999997777777776552 22 38999999999999999999999862 1111100 0
Q ss_pred ccc-hhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017963 275 GGV-ASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIY 353 (363)
Q Consensus 275 ~g~-~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y 353 (363)
+.. ...|. +.....+| +....+..++..-..+.+-.+.+.++.++.+++.++|-.+||-.-.-++.+++.|+...+|
T Consensus 255 hp~~tyGy~-~~~s~~gy-lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 255 HPVRTYGYA-FLFSLAGY-LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMY 332 (367)
T ss_pred CcHhHHHHH-HHHHHHhH-hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcc
Confidence 111 11111 11111111 1223355666666777888899999999999999999999999999999999999999888
Q ss_pred cc
Q 017963 354 GN 355 (363)
Q Consensus 354 ~~ 355 (363)
.+
T Consensus 333 sk 334 (367)
T KOG1582|consen 333 SK 334 (367)
T ss_pred cC
Confidence 87
No 24
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.25 E-value=1.2e-09 Score=104.24 Aligned_cols=297 Identities=14% Similarity=0.163 Sum_probs=187.2
Q ss_pred HHHHHHHHHHhcchhhhhhhHHhHhc--CC----cchHHHHHHHh-hhhHHHHHHHhhccccc-cC----------C-CC
Q 017963 47 LLVLSSAAMLVAFPASSLLSRVYYAN--GG----TSKWIISWVAV-AGWPLTALILLPTYFVF-KT----------F-PT 107 (363)
Q Consensus 47 ~~~~~~~~~~~g~~~~~Ll~r~y~~~--gg----~~~w~~t~vq~-ag~p~l~~p~~~~~~~~-~~----------~-~~ 107 (363)
.++++.++++.| +.-+++.+.--.. +| +...+++..-. .+|-.+..-.++..+.. +. + ..
T Consensus 4 ~v~ls~imvvsG-s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~ 82 (372)
T KOG3912|consen 4 RVFLSLIMVVSG-SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSS 82 (372)
T ss_pred hhhhhhhhhhhc-cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccC
Confidence 356777777777 6778888766543 22 33455444433 23444433222211111 10 0 12
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhcc
Q 017963 108 PLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALD 187 (363)
Q Consensus 108 ~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~ 187 (363)
|..+++++.=+++- +....++| .|+.++++|++..++-.-++|+.+||.-+++++++.+||.|+.....|.++++..
T Consensus 83 pf~p~lfl~Pal~D--i~gsslm~-vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 83 PFNPVLFLPPALCD--IAGSSLMY-VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred CCCcceecChHHHH--HhhhHHHH-HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 44555544433333 55566788 9999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCC-CCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-H----HHHhhc
Q 017963 188 SDSDR-YGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTT-I----GVVVSK 261 (363)
Q Consensus 188 ~~~~~-~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~-v----g~~~~g 261 (363)
|-... .+....++.+.|+++.+.|.+..|....+-| |..+++. ...++...|-++++...+. . ..+..+
T Consensus 160 d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Ee----k~l~~~n-V~pl~avg~eGlfG~v~~slL~i~m~yi~~~ 234 (372)
T KOG3912|consen 160 DVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEE----KQLKKSN-VAPLQAVGWEGLFGLVILSLLAIPMYYIPSG 234 (372)
T ss_pred ecccccCCccccccchhhhHHHHHHHHHHHHHHHHHH----hhhhhcc-CCHHHHhhhhhhHHHHHHHHHHHHHhheecC
Confidence 43211 1223345568899999999999999666654 4443322 3456666666666643332 2 333344
Q ss_pred c-cccchhh-hhh----hc--ccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCC
Q 017963 262 D-FQGMKSE-AKT----FK--GGVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPM 333 (363)
Q Consensus 262 ~-~~~l~~e-~~~----f~--~g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~ 333 (363)
| +..-++. .++ |+ .+.+..++++..+.++-..+-..-..+.++.|+-.--+.-.++.-+.=+++...++|.|
T Consensus 235 ~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f 314 (372)
T KOG3912|consen 235 DSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYF 314 (372)
T ss_pred CcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHH
Confidence 2 1111111 111 11 34455666676666554433333334445555555555555555555588888999999
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 017963 334 SGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 334 ~~~k~ig~~lvl~G~~~y~ 352 (363)
...|+.|.++.+.|...|.
T Consensus 315 ~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 315 HLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999983
No 25
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.21 E-value=8.6e-11 Score=115.13 Aligned_cols=296 Identities=12% Similarity=0.123 Sum_probs=178.4
Q ss_pred hHHHHHHHHHHHHhcchhhhhhhHHhHhc-CCcchHHHHHHHhhhhHHHH-HHHhhccccccCC--CCCCcHHHHHHHHH
Q 017963 44 HWILLVLSSAAMLVAFPASSLLSRVYYAN-GGTSKWIISWVAVAGWPLTA-LILLPTYFVFKTF--PTPLDLKLTLAYIV 119 (363)
Q Consensus 44 ~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~-gg~~~w~~t~vq~ag~p~l~-~p~~~~~~~~~~~--~~~~~~~l~~~~~~ 119 (363)
+.....+++.+=.+.+....+...+=.++ |.+-.|.-|.++.+---+.. ..-.+-.. ++.+ ++...++++-+
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~-~~~~~~~~~~~~~llpl--- 89 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLV-PPSKISSKLPLRTLLPL--- 89 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCC-CCCccccccchHHHHHH---
Confidence 45555555555555554444444444444 88888999988544332221 11111111 1111 12235555444
Q ss_pred HHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcc
Q 017963 120 LGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDR 199 (363)
Q Consensus 120 ~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~ 199 (363)
|+.......+=+.+++|.|+|.+..+.++.|+||.++++++.+|++++....+++....|+++-...+. +
T Consensus 90 -~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---------~ 159 (316)
T KOG1441|consen 90 -GLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---------S 159 (316)
T ss_pred -HHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc---------c
Confidence 777888888888999999999999999999999999999999999999999999999999776544332 2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHH--HHhhcccccchhhhhhhcccc
Q 017963 200 QYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIG--VVVSKDFQGMKSEAKTFKGGV 277 (363)
Q Consensus 200 ~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg--~~~~g~~~~l~~e~~~f~~g~ 277 (363)
-+..|++.++++.+..++...+.+...++- +++ ...++..-+.+-++...+++- ...+++-. ...+.+.|+..
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~--~~~-~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~- 234 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSK--GES-LNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVT- 234 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhcc--ccc-cCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchh-
Confidence 369999999999999999666654444321 222 235566666655555544432 22223211 00011122211
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccC
Q 017963 278 ASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNSS 357 (363)
Q Consensus 278 ~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~~ 357 (363)
+...+......+ +.-+...-++..+|.+.=++....-=-++.+.++++|+|+.|+.++.|.++++.|...|.+-+.+
T Consensus 235 --~~~~~~~sv~~f-~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~ 311 (316)
T KOG1441|consen 235 --FLILLLNSVLAF-LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK 311 (316)
T ss_pred --hHHHHHHHHHHH-HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 111111111111 11122222223344444332222222334577888899999999999999999999998877765
Q ss_pred CCCC
Q 017963 358 TPKD 361 (363)
Q Consensus 358 ~~~~ 361 (363)
++++
T Consensus 312 ~~~~ 315 (316)
T KOG1441|consen 312 EKKG 315 (316)
T ss_pred hhcc
Confidence 5443
No 26
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.20 E-value=5.9e-10 Score=103.33 Aligned_cols=204 Identities=15% Similarity=0.112 Sum_probs=118.9
Q ss_pred HhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHH
Q 017963 133 YAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGS 212 (363)
Q Consensus 133 ~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa 212 (363)
.++.+.++....+. +.|.+.++++...+++.|++..|+.++.++..|+.....++..+ +....++...|..+.++++
T Consensus 18 v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~--~~~~~g~~~~g~~~~l~a~ 94 (222)
T TIGR00803 18 IALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA--KTLMFGNPVVGLSAVLSAL 94 (222)
T ss_pred HHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc--cccccccHHHHHHHHHHHH
Confidence 55555555555555 66666666666666666666666666555555554443332221 1122346788888888888
Q ss_pred HHHHHHHHHHHHHHHHhhccccc-hhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHHHHHHHHHHHH
Q 017963 213 ALHGLIFALSELVFVKLVGRRSF-HVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYYLVLIWGAITF 291 (363)
Q Consensus 213 ~l~gl~l~l~q~~~kkv~~~~~~-~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~l~lv~tav~~ 291 (363)
...++ .....||..|++.- .+...++ ..++..+....+.... +.+..+. ..+..|.......++.+...-
T Consensus 95 ~~~~~----~~~y~e~~~k~~~~~~~~~~~~--l~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~a~~ 165 (222)
T TIGR00803 95 LSSGF----AGVYFEKILKDGDTMFWSRNLQ--LPLFGLFSTFSVLLWS-DGTLISN--FGFFIGYPTAVWIVGLLNVGG 165 (222)
T ss_pred HHHhh----hHHHHHHcccCCCCchHHHHHH--HHHHHHHHHHHHHhhc-ccchhhc--cCcccCCchHHHHHHHHHHhc
Confidence 88888 44455555443211 1222222 2223333223333332 2222211 122233332222222222112
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 292 QLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 292 q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
+ .-+....++.+++..+++.+.++.++.++++++|||+++..+.+|..+++.|...|
T Consensus 166 ~---~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 166 G---LCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred C---ceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2 33777888999999999999999999999999999999999999999999876654
No 27
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.17 E-value=1.7e-11 Score=116.08 Aligned_cols=283 Identities=16% Similarity=0.085 Sum_probs=163.4
Q ss_pred cCCCchhHHHHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHH
Q 017963 38 KRKPISHWILLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAY 117 (363)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~ 117 (363)
+.|+...-++..+++++...-......+.+-=-+++..| ..+--+...|-.+.++..---|.+-.+++++ =
T Consensus 33 ~d~p~~gl~l~~vs~ff~~~~vv~t~~~e~~p~e~a~~r--------~l~~mlit~pcliy~~~~v~gp~g~R~~LiL-R 103 (346)
T KOG4510|consen 33 KDKPNLGLLLLTVSYFFNSCMVVSTKVLENDPMELASFR--------LLVRMLITYPCLIYYMQPVIGPEGKRKWLIL-R 103 (346)
T ss_pred cCCCccCceehhhHHHHhhHHHhhhhhhccChhHhhhhh--------hhhehhhhheEEEEEeeeeecCCCcEEEEEe-e
Confidence 447888888888887776655554444443333334444 2222334445444443211011111111111 1
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCC--CCCC--
Q 017963 118 IVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSD--SDRY-- 193 (363)
Q Consensus 118 ~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~--~~~~-- 193 (363)
...| ...-..+| |++.|+|.+.+++|.-+.|.||.+|++.++|||+|++..++.++...|++++.-.+. +|..
T Consensus 104 g~mG--~tgvmlmy-ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g 180 (346)
T KOG4510|consen 104 GFMG--FTGVMLMY-YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG 180 (346)
T ss_pred hhhh--hhHHHHHH-HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc
Confidence 1223 34445678 999999999999999999999999999999999999999999999999998853332 1111
Q ss_pred CCCCc-chhhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhh
Q 017963 194 GNITD-RQYIMGFVWDILGSAL-HGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAK 271 (363)
Q Consensus 194 ~~~s~-~~~~~G~~l~L~Aa~l-~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~ 271 (363)
++.+. .....|-..++.+... .+.|.++ |+++|+-++.+. + -|.++++++..++|...-|+| .+|+.-+
T Consensus 181 ~~~s~~~~~~~gt~aai~s~lf~asvyIil-----R~iGk~~h~~ms--v-syf~~i~lV~s~I~~~~ig~~-~lP~cgk 251 (346)
T KOG4510|consen 181 EDSSQVEYDIPGTVAAISSVLFGASVYIIL-----RYIGKNAHAIMS--V-SYFSLITLVVSLIGCASIGAV-QLPHCGK 251 (346)
T ss_pred cccccccccCCchHHHHHhHhhhhhHHHHH-----HHhhccccEEEE--e-hHHHHHHHHHHHHHHhhccce-ecCcccc
Confidence 11111 1224454444443332 3344444 788787665532 1 246778888888888877776 4665443
Q ss_pred hhcccchhHHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017963 272 TFKGGVASYYLVLI-WGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFG 349 (363)
Q Consensus 272 ~f~~g~~~y~l~lv-~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~ 349 (363)
++- .+..+. ...+.+.+..+|+-.-..= -.-+++....+.+ +..+++||+.+|++.++|+++++....
T Consensus 252 dr~-----l~~~lGvfgfigQIllTm~lQiErAG-----pvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v 321 (346)
T KOG4510|consen 252 DRW-----LFVNLGVFGFIGQILLTMGLQIERAG-----PVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTV 321 (346)
T ss_pred ceE-----EEEEehhhhhHHHHHHHHHhhhhccC-----CeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHH
Confidence 331 111111 1111222222321111110 1112334556645 889999999999999999998875544
Q ss_pred HH
Q 017963 350 SY 351 (363)
Q Consensus 350 ~y 351 (363)
.-
T Consensus 322 ~~ 323 (346)
T KOG4510|consen 322 WV 323 (346)
T ss_pred HH
Confidence 43
No 28
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.11 E-value=2e-09 Score=100.59 Aligned_cols=221 Identities=15% Similarity=0.200 Sum_probs=153.7
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchh
Q 017963 122 FLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQY 201 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~ 201 (363)
+-+.+...--+.+++|.|-.|..+=.+.+|+=+|++++++.++++.|.+-..+.+..+|+++..-.+.. -.+.+++..
T Consensus 93 ~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K--v~g~e~~t~ 170 (337)
T KOG1580|consen 93 ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK--VGGAEDKTF 170 (337)
T ss_pred HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--cCCCccccc
Confidence 334444444457899999999999999999999999999999999999999999999998886544332 123455667
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHH
Q 017963 202 IMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYY 281 (363)
Q Consensus 202 ~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~ 281 (363)
..|-++.+.+-.+=|+-..+.+...+.+ ++.. -.|++++.+-+++.+.+|++..||-..+-+=.++ +....|-
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g----~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R--hP~~~~~ 243 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASY-QRTG----TSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR--HPYVFWD 243 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhh-ccCc----hhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh--ccHHHHH
Confidence 7899999999999999666655555444 3333 3455666666777788899998873222110111 1111222
Q ss_pred HHHH--HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH-Hhcc
Q 017963 282 LVLI--WGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY-IYGN 355 (363)
Q Consensus 282 l~lv--~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y-~y~~ 355 (363)
+++. ..++.+...+.. +.+-+.+..+++.+-+...+.+.+|++|++++++.|++|.++++.++..= .+|+
T Consensus 244 l~l~ai~s~LGQ~fIF~t----v~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK 316 (337)
T KOG1580|consen 244 LTLLAIASCLGQWFIFKT----VEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK 316 (337)
T ss_pred HHHHHHHHHhhhHHHHHH----HHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence 2222 222332222222 33345666788888899999999999999999999999999999887664 3443
No 29
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.86 E-value=7.4e-09 Score=86.49 Aligned_cols=73 Identities=26% Similarity=0.469 Sum_probs=65.1
Q ss_pred HHHHHHHHH-HHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCC
Q 017963 117 YIVLGFLSA-ADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDS 190 (363)
Q Consensus 117 ~~~~Gll~~-~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~ 190 (363)
++..|++.. .++.+|.++++|.| +..+.+.++.|+|+++++.+++|||++++++.++++.++|++++..++.+
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 344466665 88999999999999 58889999999999999999999999999999999999999999887754
No 30
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.86 E-value=4.9e-07 Score=88.02 Aligned_cols=278 Identities=12% Similarity=0.169 Sum_probs=178.4
Q ss_pred hhhhhhhHHhHhc-CCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017963 60 PASSLLSRVYYAN-GGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYL 138 (363)
Q Consensus 60 ~~~~Ll~r~y~~~-gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~yl 138 (363)
+.-++.-++-=++ +-++-...-++|.---.+.+. ++- +-+--+.+|..++..--..+.-++..++-+.=..+++|+
T Consensus 25 ~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~--~lk-~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~l 101 (314)
T KOG1444|consen 25 ILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVL--VLK-RLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYL 101 (314)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH--HHH-HhceeecCCcChHHHHHHccHHHHHHHHHHHcccccccc
Confidence 3334444444433 666666666777655444322 111 111122334333333334445677777777777899999
Q ss_pred ChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHH
Q 017963 139 PASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLI 218 (363)
Q Consensus 139 pvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~ 218 (363)
|+++++++....++++++.-..++|.|+++..+.+++...+|+...+..|.+. ...|..+.+..++.-+.+
T Consensus 102 nVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf---------~~~gY~w~~~n~~~~a~~ 172 (314)
T KOG1444|consen 102 NVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF---------NLRGYSWALANCLTTAAF 172 (314)
T ss_pred CchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee---------cchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988877766553 244889999999999987
Q ss_pred HHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHHHHHHHHH-----HHHHH
Q 017963 219 FALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYYLVLIWGA-----ITFQL 293 (363)
Q Consensus 219 l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~l~lv~ta-----v~~q~ 293 (363)
.... ||..+.... .-.++.+|-.+++.++..+=.+..|||+++..+-..+.+-. .++.+.... ++|.-
T Consensus 173 ~v~~----kk~vd~~~l-~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~--~~~~~~lScv~gf~isy~s 245 (314)
T KOG1444|consen 173 VVYV----KKSVDSANL-NKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSS--VLVVMLLSCVMGFGISYTS 245 (314)
T ss_pred HHHH----HHhhccccc-cceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchh--HHHHHHHHHHHHHHHHHHH
Confidence 7774 555443321 12356677888999998887888888874433322222111 111111111 11111
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccCCCCC
Q 017963 294 GVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNSSTPKD 361 (363)
Q Consensus 294 ~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~~~~~~ 361 (363)
.+- .-..|++.-.++-+.=+-.+.+..++++|.++++...+|..+.+.|-..|.|..++|+|.
T Consensus 246 ~~c-----t~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 246 FLC-----TRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ 308 (314)
T ss_pred HHH-----HhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence 100 001133333334433345566777888899999999999999999999999988665543
No 31
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.80 E-value=3.9e-06 Score=79.55 Aligned_cols=263 Identities=13% Similarity=0.105 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCC-CCCCcHHHHHHHHHHHHH
Q 017963 45 WILLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTF-PTPLDLKLTLAYIVLGFL 123 (363)
Q Consensus 45 ~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~-~~~~~~~l~~~~~~~Gll 123 (363)
-+.+.+++..+=.|.+.+..| |.+-| .|-.|++..+-=.+++++++ |+.|++ .++-++.++.+ |+-
T Consensus 14 ~~~ll~amvsiq~Gas~Ak~L----FP~vG--~~g~t~lRl~~aaLIll~l~---RPwr~r~~~~~~~~~~~y----Gvs 80 (292)
T COG5006 14 ILALLVAMVSIQSGASFAKSL----FPLVG--AAGVTALRLAIAALILLALF---RPWRRRLSKPQRLALLAY----GVS 80 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHH----ccccC--hhhHHHHHHHHHHHHHHHHh---hHHHhccChhhhHHHHHH----HHH
Confidence 445666666666665555443 33333 35566666665555554443 232333 33445555555 888
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhh
Q 017963 124 SAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIM 203 (363)
Q Consensus 124 ~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~ 203 (363)
++..|++|-.++..+|.+++.-+--+.|+-.++++ .+|..-..|+++ +..|..++.-...+ ...-+..
T Consensus 81 Lg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vwvaL--AvlGi~lL~p~~~~------~~~lDp~ 148 (292)
T COG5006 81 LGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVWVAL--AVLGIWLLLPLGQS------VWSLDPV 148 (292)
T ss_pred HHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccchhhHHHHHH--HHHHHHhheeccCC------cCcCCHH
Confidence 88999977799999999999999999998888765 455555555554 55666665333222 1223689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHHHH
Q 017963 204 GFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYYLV 283 (363)
Q Consensus 204 G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~l~ 283 (363)
|..++++|.++|+.|...+| |+.+..+-..-+..-+.++.+ +++-+|..-.|. ..+.-+ .-...--+.
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~----r~g~~~~g~~g~a~gm~vAav--iv~Pig~~~ag~-~l~~p~-----ll~laLgva 216 (292)
T COG5006 149 GVALALGAGACWALYIVLGQ----RAGRAEHGTAGVAVGMLVAAL--IVLPIGAAQAGP-ALFSPS-----LLPLALGVA 216 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcc----hhcccCCCchHHHHHHHHHHH--HHhhhhhhhcch-hhcChH-----HHHHHHHHH
Confidence 99999999999999999985 444332222111111112222 222245433332 111100 001122223
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017963 284 LIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFG 349 (363)
Q Consensus 284 lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~ 349 (363)
+..+++-|.+--+...++-..+-+++- ..-|... +.+.+++||.+|..|+.+.++++.+.+
T Consensus 217 vlSSalPYsLEmiAL~rlp~~~F~~Ll-----SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 217 VLSSALPYSLEMIALRRLPARTFGTLL-----SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHhcccchHHHHHHHhhCChhHHHHHH-----HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 455566666655555555554333332 2568766 999999999999999999999997655
No 32
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.77 E-value=2.7e-06 Score=82.36 Aligned_cols=226 Identities=15% Similarity=0.164 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCc
Q 017963 119 VLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITD 198 (363)
Q Consensus 119 ~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~ 198 (363)
..++.....-.+=..+++|++-.|..+-.+.+.+=+|+.+.++-|+|++...-....+.+.|+.+-...+.+|.+.+..+
T Consensus 88 ~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~ 167 (327)
T KOG1581|consen 88 LISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGR 167 (327)
T ss_pred HHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCC
Confidence 33666666666555999999999999999999999999999999999999999999999999988776665553333334
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhc--cc
Q 017963 199 RQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFK--GG 276 (363)
Q Consensus 199 ~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~--~g 276 (363)
.+..+|+.+..+.-+.=|+ .+-..+++.+++. .....|++++.++.++....+++..|.+. ++-.|- +-
T Consensus 168 ~ns~~G~~Ll~~~L~fDgf----Tn~tQd~lf~~~k-~s~~~mM~~vNLf~~i~~~~~li~qg~~~----~av~F~~~hp 238 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGF----TNATQDSLFKKYK-VSSLHMMFGVNLFSAILNGTYLILQGHLL----PAVSFIKEHP 238 (327)
T ss_pred CCchHhHHHHHHHHHHHhh----HHhHHHHHhccCC-ccHhHHHHHHHHHHHHHHHHhhhcCCCCc----hHHHHHHcCh
Confidence 5678999999988888888 5556666665432 45678999999999999999977776532 111221 22
Q ss_pred chhHHHHHH--HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017963 277 VASYYLVLI--WGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYG 354 (363)
Q Consensus 277 ~~~y~l~lv--~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~ 354 (363)
+...-+.+- ++++.+...+.. +-.-.++.-..|++.++-++.+++.++||.+.+..|+++..+++.|...=.|-
T Consensus 239 ~~~~Di~l~s~~gavGQ~FI~~T----I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 239 DVAFDILLYSTCGAVGQLFIFYT----IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL 314 (327)
T ss_pred hHHHHHHHHHHhhhhhhheehhh----HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence 223333121 222222222211 11123566777899999999999999999999999999999999988776665
Q ss_pred ccC
Q 017963 355 NSS 357 (363)
Q Consensus 355 ~~~ 357 (363)
+.+
T Consensus 315 k~~ 317 (327)
T KOG1581|consen 315 KKK 317 (327)
T ss_pred HHh
Confidence 543
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.69 E-value=2.3e-07 Score=76.36 Aligned_cols=116 Identities=22% Similarity=0.315 Sum_probs=80.0
Q ss_pred hhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHH-HHHHHHHHHHhhccCChhH
Q 017963 64 LLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFL-SAADNLMYAYAYAYLPAST 142 (363)
Q Consensus 64 Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll-~~~~n~ly~~gL~ylpvst 142 (363)
...|...++ -+..+...+-...+.+ +++..... .+++ .....++.....+..|++ .+..+.+|.++++++|++.
T Consensus 8 ~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 82 (126)
T PF00892_consen 8 VFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLIL-GRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASI 82 (126)
T ss_pred HHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhh-cccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhH
Confidence 344444444 4445555555555555 33323222 1111 111222222223334555 6888999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHh
Q 017963 143 AALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTII 184 (363)
Q Consensus 143 ~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll 184 (363)
.+.+..++|+++++++++++|||+++.++.|+++...|.+++
T Consensus 83 ~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 83 VSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998875
No 34
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.59 E-value=1e-06 Score=80.89 Aligned_cols=222 Identities=13% Similarity=0.173 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCc
Q 017963 119 VLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITD 198 (363)
Q Consensus 119 ~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~ 198 (363)
++-++....|++|-.+++.++++..+-+.+-..+|+-+++.+.+|+|+.-.++.+++++.-|.++++..|.. .
T Consensus 58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-------~ 130 (290)
T KOG4314|consen 58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-------H 130 (290)
T ss_pred ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-------h
Confidence 456778889999999999999999999999999999999999999999999999999999998887644422 2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHH---HHHhhcccccchhhhhhhcc
Q 017963 199 RQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTI---GVVVSKDFQGMKSEAKTFKG 275 (363)
Q Consensus 199 ~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~v---g~~~~g~~~~l~~e~~~f~~ 275 (363)
++.++|..++++++...++| .++||+.+..-.+-.+--.+-..+++-.++--+ =+...|- +.+ +.|..
T Consensus 131 a~e~iGi~~AV~SA~~aAlY----KV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V-E~~----qsFA~ 201 (290)
T KOG4314|consen 131 ADEIIGIACAVGSAFMAALY----KVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV-EHL----QSFAA 201 (290)
T ss_pred hhhhhhHHHHHHHHHHHHHH----HHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch-HHH----HHHhh
Confidence 45799999999999999995 455888876544322211111122222222111 1112221 111 22222
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcc
Q 017963 276 GVASYYLVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGN 355 (363)
Q Consensus 276 g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~ 355 (363)
.+|. -+++.+..|.++-.-++-=+.....++-++=+.+.+|.....-.++=+-.++.....+..++..||...+..+
T Consensus 202 ~PWG---~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 202 APWG---CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred CCch---hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 2111 1334444444433222211223355555555677789888777775566788889999999999999887665
Q ss_pred cCCC
Q 017963 356 SSTP 359 (363)
Q Consensus 356 ~~~~ 359 (363)
-+|+
T Consensus 279 d~~e 282 (290)
T KOG4314|consen 279 DKDE 282 (290)
T ss_pred chhh
Confidence 5544
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.23 E-value=4.6e-05 Score=71.33 Aligned_cols=118 Identities=16% Similarity=0.140 Sum_probs=78.1
Q ss_pred hhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHH-HHHHHHHHHHhhccC
Q 017963 60 PASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFL-SAADNLMYAYAYAYL 138 (363)
Q Consensus 60 ~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll-~~~~n~ly~~gL~yl 138 (363)
+......|....+.+......+..+...-.+.+.|...... +++.+ ..+.+..-...|+. ....+.+|.++++++
T Consensus 141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 216 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG---PNPQA-LSLQWGALLYLGLIGTALAYFLWNKGLTLV 216 (260)
T ss_pred HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC---CCCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44456666666554444433333333333344445544321 11111 22222222223433 567778899999999
Q ss_pred ChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHH
Q 017963 139 PASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAM 181 (363)
Q Consensus 139 pvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Ga 181 (363)
|+++.+++..++|++++++++++++||+++.++.|+++...|+
T Consensus 217 ~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 217 DPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998884
No 36
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.22 E-value=3.2e-07 Score=87.70 Aligned_cols=220 Identities=17% Similarity=0.240 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 017963 116 AYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGN 195 (363)
Q Consensus 116 ~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~ 195 (363)
..++.=..+..||++ ++|.|++.|-+=++...+||.+++|.++|||-+..-..+-.+...| +.-+.|. ++
T Consensus 108 lsvVfi~mI~fnnlc----L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~G-----F~lGvdq-E~ 177 (347)
T KOG1442|consen 108 LSVVFILMISFNNLC----LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILG-----FGLGVDQ-EG 177 (347)
T ss_pred hhheeeeehhcccee----hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheeh-----heecccc-cc
Confidence 344444567788864 5889999999999999999999999999999998876665554444 3322221 12
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcc
Q 017963 196 ITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKG 275 (363)
Q Consensus 196 ~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~ 275 (363)
.++.-...|.+.-+.|++.-++ ..+.-||+..... .-+-...+|....|.+.++--++++||++.+ .+|.+
T Consensus 178 ~~~~ls~~GvifGVlaSl~vAl----naiytkk~l~~v~-~~iw~lt~ynnv~a~lLflpll~lnge~~~v----~~~~~ 248 (347)
T KOG1442|consen 178 STGTLSWIGVIFGVLASLAVAL----NAIYTKKVLPPVG-DCIWRLTAYNNVNALLLFLPLLILNGEFQAV----VGFPH 248 (347)
T ss_pred ccCccchhhhHHHHHHHHHHHH----HHHhhheeccccc-CeehhhHHHHHHHHHHHHHHHHHHcchHHHH----cCccc
Confidence 2333457899998999998888 4444565543221 2234556678889999998889999997755 23321
Q ss_pred -cchhHHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017963 276 -GVASYYLVLI-WGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIY 353 (363)
Q Consensus 276 -g~~~y~l~lv-~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y 353 (363)
+.+.++..+. .....+...++. .-.++.+|.+.-|+--+..-..-.++|+.+++|.-+...+-+-++++.|-..|.+
T Consensus 249 l~a~~Fw~~mtLsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 249 LPAIKFWILMTLSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL 327 (347)
T ss_pred chHHHHHHHHHHHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence 2233333222 222233222222 1223455667655444444455669999999999999999999999999999976
Q ss_pred cc
Q 017963 354 GN 355 (363)
Q Consensus 354 ~~ 355 (363)
-+
T Consensus 328 vk 329 (347)
T KOG1442|consen 328 VK 329 (347)
T ss_pred HH
Confidence 54
No 37
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.20 E-value=5e-05 Score=76.13 Aligned_cols=72 Identities=8% Similarity=0.209 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCC
Q 017963 120 LGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSD 191 (363)
Q Consensus 120 ~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~ 191 (363)
.|+..++..++|++++++++++..++....+|+|++++++++++|++++.++.|.++...|..+..++...|
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 344456677799999999999999999999999999999999999999999999999999998887655443
No 38
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.18 E-value=1.8e-05 Score=66.43 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhc
Q 017963 122 FLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIAL 186 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~ 186 (363)
+.++...+++..+++.+|.+.+..+.+++++++++.+++++|||+|+.|+.|+++..+|+++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 44777888999999999999999999999999999999999999999999999999999988753
No 39
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.08 E-value=6.8e-07 Score=84.76 Aligned_cols=254 Identities=14% Similarity=0.173 Sum_probs=161.2
Q ss_pred CCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhH
Q 017963 73 GGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLV 152 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~ 152 (363)
|=|-+=.+|++.=+-..+.--|..++++ +-.+-.+++ |+++++.=.-.|++-..+.+|++-.+.+++-+=..+
T Consensus 44 ~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~~~~~~h----Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip 116 (336)
T KOG2766|consen 44 GINAPTSQTFLNYVLLALVYGPIMLFRR---KYIKAKWRH----YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIP 116 (336)
T ss_pred cCCCccHHHHHHHHHHHHHHhhHHHhhh---HHHHHHHHH----hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhH
Confidence 3455677888877766666666665422 111111333 777787777788877789999999999999999999
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017963 153 FSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGR 232 (363)
Q Consensus 153 Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~ 232 (363)
-.++++++++|-|+.+.|+.|+++...|++++...|-.. .+..++.+...||.+++.+|-+||+.-..-|..-||.
T Consensus 117 ~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a-gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~--- 192 (336)
T KOG2766|consen 117 CVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA-GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA--- 192 (336)
T ss_pred HHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc-ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC---
Confidence 999999999999999999999999999999887665432 1223456789999999999999999444433433333
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhc-ccccchhhhhhhcccchhHHHH-HHHHHHHHHHHHHhhhhhhhhhhhhhH
Q 017963 233 RSFHVVLEQQVMVSLFAFAFTTIGVVVSK-DFQGMKSEAKTFKGGVASYYLV-LIWGAITFQLGVLGGTAVLFLASTVLA 310 (363)
Q Consensus 233 ~~~~~vle~q~~~~l~a~~~~~vg~~~~g-~~~~l~~e~~~f~~g~~~y~l~-lv~tav~~q~~~lgv~glv~~~ssL~a 310 (363)
+ ..|.+-.+++++++...+-.+.+. +-..++.+ ++..-++. ...-..-|.+.++ ++...++-.-
T Consensus 193 -d---~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~------~~i~~yl~f~L~MFllYsl~pi----l~k~~~aT~~ 258 (336)
T KOG2766|consen 193 -D---RVELMGFLGLFGAIISAIQFIFERHHVSTLHWD------SAIFLYLRFALTMFLLYSLAPI----LIKTNSATMF 258 (336)
T ss_pred -c---HHHHHHHHHHHHHHHHHHHHhhhccceeeEeeh------HHHHHHHHHHHHHHHHHHhhHH----heecCCceEE
Confidence 2 356667788999888888765554 22222221 11111111 1111122222221 1111111111
Q ss_pred HHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017963 311 GILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIY 353 (363)
Q Consensus 311 ~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y 353 (363)
|. +.+---.-+++ +-.||-+++|.-.++.+.+..|+..|.-
T Consensus 259 nl-slLTsDmwsl~-i~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 259 NL-SLLTSDMWSLL-IRTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred Eh-hHhHHHHHHHH-HHHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 10 00000111111 1557888999999999999999999833
No 40
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.07 E-value=0.00066 Score=65.52 Aligned_cols=113 Identities=10% Similarity=0.079 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH-HhhhhHHHHHHHHHHhcccccHHHH----HHHHHHHHHHHHhh
Q 017963 111 LKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALL-ASSSLVFSTLFGYFLVKNKLNAAMI----NAVVIITAAMTIIA 185 (363)
Q Consensus 111 ~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli-~ssql~Ftalfs~~ilkek~t~~~i----~svvllt~Gavll~ 185 (363)
.+.+..+++.|+..+..|..-..+.+++.+|..-=+ ...|++.|.+.++++++|--+..+. .++++..+|+++.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 478888999999999999977688877666544333 3689999999999999997776654 48889999998887
Q ss_pred ccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 017963 186 LDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSEL 224 (363)
Q Consensus 186 ~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~ 224 (363)
.++++++ ++.++++..-|....+.+++.|..|-.+.+.
T Consensus 122 ~~~~~~~-~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 122 YQDKKSD-KSSSKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred ccccccc-ccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 7775532 2223455667999999999999999888543
No 41
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.00 E-value=0.00036 Score=67.43 Aligned_cols=69 Identities=22% Similarity=0.159 Sum_probs=60.7
Q ss_pred HHHH-HHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccC
Q 017963 120 LGFL-SAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDS 188 (363)
Q Consensus 120 ~Gll-~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~ 188 (363)
.|+. ....+.+|.++++++|++..+++..++|++++++++++++|++++.++.|.++...|++......
T Consensus 214 lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 214 VAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 4444 45566699999999999999999999999999999999999999999999999999988775443
No 42
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.00 E-value=9.4e-05 Score=72.45 Aligned_cols=68 Identities=25% Similarity=0.352 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCC
Q 017963 123 LSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDS 190 (363)
Q Consensus 123 l~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~ 190 (363)
+++.++.+-..++.+.|++.-+=+.+.+++++++++.+++|||++++.+.|+++...|++++......
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~ 126 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPK 126 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCC
Confidence 34666777778999999999999999999999999999999999999999999999999888765544
No 43
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.95 E-value=0.00011 Score=71.20 Aligned_cols=108 Identities=18% Similarity=0.273 Sum_probs=86.5
Q ss_pred cchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHhhhhHH
Q 017963 75 TSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYA-YLPASTAALLASSSLVF 153 (363)
Q Consensus 75 ~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~-ylpvst~sli~ssql~F 153 (363)
-+.+-.++.|..|..+-...++..++ +.+|..++........|++.+..+.+|..+++ +.++++++++.+..|+.
T Consensus 176 ~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvi 251 (290)
T TIGR00776 176 VDGLSVLLPQAIGMVIGGIIFNLGHI----LAKPLKKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVII 251 (290)
T ss_pred CCcceehhHHHHHHHHHHHHHHHHHh----cccchHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHH
Confidence 55677788888866665544444331 11333444444566689999999999999999 99999999999999999
Q ss_pred HHHHHHHHhcccccHHHH----HHHHHHHHHHHHhhc
Q 017963 154 STLFGYFLVKNKLNAAMI----NAVVIITAAMTIIAL 186 (363)
Q Consensus 154 talfs~~ilkek~t~~~i----~svvllt~Gavll~~ 186 (363)
+++++++++||+.+++++ .|.++...|+.+++.
T Consensus 252 a~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 252 STLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 999999999999999999 999999999888754
No 44
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.93 E-value=0.00021 Score=66.96 Aligned_cols=260 Identities=12% Similarity=0.151 Sum_probs=158.6
Q ss_pred CCcchHHHHHHHhhhhHHHHHHHhhcc-cc-ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhh
Q 017963 73 GGTSKWIISWVAVAGWPLTALILLPTY-FV-FKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSS 150 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~~p~~~~~-~~-~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssq 150 (363)
|-+...+.-+||.--...-+.-+=... -+ |.++.+ +. .++.+++...-+--+-+++|+|++.++++.-+.
T Consensus 33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK----~W----fpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNlt 104 (309)
T COG5070 33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAK----KW----FPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLT 104 (309)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhh----hh----cCHHHHHHHHHHhcccceeeeeeeHHHHhccce
Confidence 778888888888654443322111110 01 111111 11 112344445555556889999999999999999
Q ss_pred hHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017963 151 LVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLV 230 (363)
Q Consensus 151 l~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~ 230 (363)
.+..+..-..++|.|.|.....+-+++.++++.-.++|.+... ...+..-.|.+.....+...+.+...+ ||.+
T Consensus 105 II~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~--~~~~~lN~GY~Wm~~NclssaafVL~m----rkri 178 (309)
T COG5070 105 IILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASA--FKAQILNPGYLWMFTNCLSSAAFVLIM----RKRI 178 (309)
T ss_pred eehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHH--HHhcccCCceEEEehhhHhHHHHHHHH----HHhh
Confidence 9999999999999999999999999999998886666643210 011122347777777888888866664 5555
Q ss_pred ccccchhHHHHHHHHHHHHHHHHH-HHHHhhcccccchhhhhhhcccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 017963 231 GRRSFHVVLEQQVMVSLFAFAFTT-IGVVVSKDFQGMKSEAKTFKGGVASYYLVLIWGAITFQLGVLGGTAVLFLASTVL 309 (363)
Q Consensus 231 ~~~~~~~vle~q~~~~l~a~~~~~-vg~~~~g~~~~l~~e~~~f~~g~~~y~l~lv~tav~~q~~~lgv~glv~~~ssL~ 309 (363)
|-..+. =.|-++|-.+.+.+.++ .+++.+ ||..- .-+.+++.-. +.|-+++ .+|.+|+---..|...++
T Consensus 179 ~ltNf~-d~dtmfYnNllslPiL~~~s~~~e-dws~~-n~annl~~d~------l~am~IS-gl~svgiSy~saWcvrVt 248 (309)
T COG5070 179 KLTNFK-DFDTMFYNNLLSLPILLSFSFLFE-DWSPG-NLANNLSVDS------LMAMFIS-GLCSVGISYCSAWCVRVT 248 (309)
T ss_pred cccccc-hhhHHHHhhhHHHHHHHHHHHHhc-cCCcc-hhhcCCChHH------HHHHHHH-HHHHhhhhhccceeEeeh
Confidence 543322 24666888888888777 466655 66421 1122332111 2222211 223333222222323333
Q ss_pred HHHH-H---HhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccc
Q 017963 310 AGIL-N---AIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNS 356 (363)
Q Consensus 310 a~vi-~---~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~ 356 (363)
++.. + ++-.-..++.+.++|+++-|-.++.+..+-+..-+.|.+.+.
T Consensus 249 SSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks 299 (309)
T COG5070 249 SSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS 299 (309)
T ss_pred hhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 2 222333457788889999999999999999988888887664
No 45
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.90 E-value=0.00034 Score=67.68 Aligned_cols=69 Identities=13% Similarity=0.076 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhc
Q 017963 118 IVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIAL 186 (363)
Q Consensus 118 ~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~ 186 (363)
+..|+..+.-+++|.++++++|++..+++...+|++++++++++++|++++.++.|.++...|+.+...
T Consensus 219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 345566777888999999999999999999999999999999999999999999999999999877644
No 46
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.79 E-value=2.8e-05 Score=66.83 Aligned_cols=112 Identities=18% Similarity=0.150 Sum_probs=82.5
Q ss_pred CCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhH
Q 017963 73 GGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLV 152 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~ 152 (363)
.|-..=++|.+.+.-.-..+.-.++.. .+...+....+|-+..-++.|+..++.-++|+.+++.=++|--.=+-.+.++
T Consensus 27 ~~vdp~~At~IRtiVi~~~l~~v~~~~-g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svv 105 (140)
T COG2510 27 EGVDPDFATTIRTIVILIFLLIVLLVT-GNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVV 105 (140)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHHhc-CceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHH
Confidence 444455566665544333333233221 1222222245566666788999999999999999998888877778899999
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHHHHhh
Q 017963 153 FSTLFGYFLVKNKLNAAMINAVVIITAAMTIIA 185 (363)
Q Consensus 153 Ftalfs~~ilkek~t~~~i~svvllt~Gavll~ 185 (363)
++++||++++|||.|..+++|+++.++|+++++
T Consensus 106 l~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 106 LAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999998874
No 47
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.79 E-value=0.00072 Score=58.28 Aligned_cols=111 Identities=10% Similarity=0.048 Sum_probs=84.2
Q ss_pred CCcchHHHHHHHhhhhHHHHHHHhhccccccCC----CC----CCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 017963 73 GGTSKWIISWVAVAGWPLTALILLPTYFVFKTF----PT----PLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAA 144 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~----~~----~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~s 144 (363)
+-+..=+....+..++++++++.++.-..+..+ .. ...++....-+..|++....|+.-..-++++++.|++
T Consensus 32 ~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~ 111 (153)
T PF03151_consen 32 KLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYS 111 (153)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHH
Confidence 344445667777788888777666542211000 00 1133555555677888888899887999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Q 017963 145 LLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 145 li~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavl 183 (363)
++...+-+.+.+++.++++|++|..++.|+++.+.|..+
T Consensus 112 v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 112 VLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999999999999999754
No 48
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.78 E-value=0.00081 Score=65.11 Aligned_cols=71 Identities=18% Similarity=0.190 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhc
Q 017963 116 AYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIAL 186 (363)
Q Consensus 116 ~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~ 186 (363)
.....|+..+.-+++|+++++++|++..+++...+|+++.++++++++|++++.++.|.++..+|..++..
T Consensus 215 ~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 215 LLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33445666778888999999999999999999999999999999999999999999999999888877643
No 49
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.76 E-value=8.3e-05 Score=71.33 Aligned_cols=67 Identities=21% Similarity=0.414 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Q 017963 117 YIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 117 ~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavl 183 (363)
....++..+..+.+|.+++++.|++..+.+..++|+++.++++++++||+++.++.|.++..+|..+
T Consensus 214 ~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 214 ATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 3445566778888999999999999999999999999999999999999999999999999999876
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.75 E-value=0.0011 Score=63.99 Aligned_cols=64 Identities=22% Similarity=0.184 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhcc
Q 017963 124 SAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALD 187 (363)
Q Consensus 124 ~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~ 187 (363)
.+..+.+|.++++++|++..+++..++|++++++++++++|++|+.++.|.++...|..++...
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 5567789999999999999999999999999999999999999999999999999998887543
No 51
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.57 E-value=0.00062 Score=65.85 Aligned_cols=61 Identities=8% Similarity=0.010 Sum_probs=55.7
Q ss_pred HHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhc
Q 017963 126 ADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIAL 186 (363)
Q Consensus 126 ~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~ 186 (363)
.-|.++..++++++++++++....+|++++++++++++|++|..++.|.++...|..+...
T Consensus 233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 3446777899999999999999999999999999999999999999999999999887653
No 52
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.45 E-value=0.086 Score=52.80 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=86.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHH-HHHHhhhhHHHHHHHHHHhcc-------cccHHHHHHHHHHHHHH
Q 017963 110 DLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTA-ALLASSSLVFSTLFGYFLVKN-------KLNAAMINAVVIITAAM 181 (363)
Q Consensus 110 ~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~-sli~ssql~Ftalfs~~ilke-------k~t~~~i~svvllt~Ga 181 (363)
+.+.+..+.+.|++.+..|..+..+.+|+.+|.. .+-.-+|++++.++..++.+| +-...-+.|+++..+|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 4577778899999999999999999999888765 455678999999999999875 22345788999999999
Q ss_pred HHhhc----cCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHH
Q 017963 182 TIIAL----DSDSDRYGNITDRQYIMGFVWDILGSALHGLIF 219 (363)
Q Consensus 182 vll~~----~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l 219 (363)
++.+. .+..++.++.++++..-|++.++.+.+.|+.|-
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 99877 443221111345567789999999999999987
No 53
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.37 E-value=0.0018 Score=55.27 Aligned_cols=68 Identities=18% Similarity=0.301 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHhhccCChhH-HHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccC
Q 017963 121 GFLSAADNLMYAYAYAYLPAST-AALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDS 188 (363)
Q Consensus 121 Gll~~~~n~ly~~gL~ylpvst-~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~ 188 (363)
-+.++...++++.+++++|.+. |++......+.+++.+.++++|++|+.++.++.+..+|++++-..+
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 3557788889999999999986 4666779999999999999999999999999999999998875544
No 54
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.35 E-value=0.009 Score=57.85 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccC
Q 017963 124 SAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDS 188 (363)
Q Consensus 124 ~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~ 188 (363)
.+....+|..+++++++...+++...+|++++++++++++|++++.++.|.++..+|+.+...+.
T Consensus 225 t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 225 TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 55677799999999999999999999999999999999999999999999999999988765544
No 55
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.22 E-value=0.00095 Score=65.46 Aligned_cols=70 Identities=26% Similarity=0.368 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCC
Q 017963 123 LSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDR 192 (363)
Q Consensus 123 l~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~ 192 (363)
.+++.+..=+.++.|-|++.-+=+.+++.+++++++..++|||++..-.+|.++..+|..++..+...++
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 3555555545677778999889999999999999999999999999999999999999999988876543
No 56
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.20 E-value=0.0022 Score=55.41 Aligned_cols=66 Identities=24% Similarity=0.193 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHH--HhcccccHHHHHHHHHHHHHHHHhhccC
Q 017963 123 LSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYF--LVKNKLNAAMINAVVIITAAMTIIALDS 188 (363)
Q Consensus 123 l~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~--ilkek~t~~~i~svvllt~Gavll~~~~ 188 (363)
.++...++|.++++..|++.+.-+.+....++++.++. +++|++|+.|+.|+++..+|+.++..++
T Consensus 57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 36667779999999999999998888887888888885 8999999999999999999999976433
No 57
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.17 E-value=0.018 Score=53.81 Aligned_cols=76 Identities=28% Similarity=0.415 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhcc
Q 017963 112 KLTLAYIVLGFLSA-ADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALD 187 (363)
Q Consensus 112 ~l~~~~~~~Gll~~-~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~ 187 (363)
+.+......|+... ..+.+|.++++..|++..+.+..+++++++++++++++|+++..++.|.++...|..+...+
T Consensus 212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 33334445565555 47888889999999999999999999999999999999999999999999999998876544
No 58
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.16 E-value=0.0051 Score=50.20 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=31.8
Q ss_pred hHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017963 317 RVPI-TSIAAVILLHDPMSGFKILSLIVTFWGFGSYIY 353 (363)
Q Consensus 317 ~lPv-~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y 353 (363)
..|+ +.++++++++|+++..+++|.++++.|.....|
T Consensus 89 ~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~~ 126 (126)
T PF00892_consen 89 LSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIST 126 (126)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 4466 559999999999999999999999999887653
No 59
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.15 E-value=0.0044 Score=51.78 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhhccCChhH-HHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhc
Q 017963 122 FLSAADNLMYAYAYAYLPAST-AALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIAL 186 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst-~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~ 186 (363)
+.+....++.+.+++++|+++ |++-.-...+-+++.++++++||+++.++.++.+..+|.+.+-.
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 447777888999999999986 68889999999999999999999999999999999999887643
No 60
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.13 E-value=0.0042 Score=52.19 Aligned_cols=63 Identities=21% Similarity=0.159 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhhccCChhH-HHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHh
Q 017963 122 FLSAADNLMYAYAYAYLPAST-AALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTII 184 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst-~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll 184 (363)
+.++...++.+.+++++|+++ |++-.-...+.+++.++++.||++|+.|+.++.+...|++.+
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 447778888889999999986 688888999999999999999999999999999999998875
No 61
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.12 E-value=0.0049 Score=51.42 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhhccCChhH-HHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhh
Q 017963 123 LSAADNLMYAYAYAYLPAST-AALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIA 185 (363)
Q Consensus 123 l~~~~n~ly~~gL~ylpvst-~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~ 185 (363)
.++...++.+.+++.+|.++ |++-.-...+.+++.++++.|||+|+.++.++.+...|++.+-
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 36777888889999999986 6788889999999999999999999999999999999988863
No 62
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.06 E-value=0.0059 Score=51.34 Aligned_cols=66 Identities=21% Similarity=0.349 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhhccCChhH-HHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhcc
Q 017963 122 FLSAADNLMYAYAYAYLPAST-AALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALD 187 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst-~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~ 187 (363)
+.++...++++.+++.+|.++ |++-.....+.+++.++++++|++|+.++.++.+..+|++++-..
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 337777778889999999986 455567899999999999999999999999999999999987543
No 63
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=96.94 E-value=0.04 Score=51.84 Aligned_cols=136 Identities=15% Similarity=0.230 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchh--HH
Q 017963 204 GFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVAS--YY 281 (363)
Q Consensus 204 G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~--y~ 281 (363)
|.++.+.|+++||.-.... |. ... ....+..++=.+++++....-+...++++...+..+..++.+.. ..
T Consensus 3 g~~~~i~a~~~wg~~~~~~----k~-~~~---~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYS----KL-LKP---LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL 74 (256)
T ss_pred cHHHHHHHHHHHHHHHHHH----HH-hcc---CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence 8899999999999966664 32 221 23566666677777766554443343322111111111111111 11
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017963 282 LVLIWGAITFQLGVLGGTAVLFLASTVLAGILNAIRVPI-TSIAAVILLHDPMSGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 282 l~lv~tav~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv-~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~ 352 (363)
+.-+.....|.+...++... +.-.+.+ ....-|+ +.+++.++++|+++..++++.++.+.|+..-.
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~----~~~~a~~-l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNG----SSLEVSL-GYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcc----hHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 11111233444444442221 1111222 2334587 66999999999999999999999999987654
No 64
>COG2510 Predicted membrane protein [Function unknown]
Probab=96.91 E-value=0.013 Score=50.65 Aligned_cols=125 Identities=15% Similarity=0.225 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-c---cchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhH
Q 017963 205 FVWDILGSALHGLIFALSELVFVKLVGR-R---SFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASY 280 (363)
Q Consensus 205 ~~l~L~Aa~l~gl~l~l~q~~~kkv~~~-~---~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y 280 (363)
.+.++.+|+.+|+--. |.|++=+ . ....+ -..+...++..=.+..|.|+ .+.|. ..+...
T Consensus 5 ~~~ALLsA~fa~L~~i-----F~KIGl~~vdp~~At~I------RtiVi~~~l~~v~~~~g~~~-~~~~~----~~k~~l 68 (140)
T COG2510 5 IIYALLSALFAGLTPI-----FAKIGLEGVDPDFATTI------RTIVILIFLLIVLLVTGNWQ-AGGEI----GPKSWL 68 (140)
T ss_pred HHHHHHHHHHHHHHHH-----HHHHhccccCccHHHHH------HHHHHHHHHHHHHHhcCcee-ccccc----Ccceeh
Confidence 3567778888887443 4555422 1 11222 23444445555556677765 33232 233233
Q ss_pred HHHH--HHHHHHHHHHHHh-hhhhhhhhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017963 281 YLVL--IWGAITFQLGVLG-GTAVLFLASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGS 350 (363)
Q Consensus 281 ~l~l--v~tav~~q~~~lg-v~glv~~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~ 350 (363)
|+.+ ..+..+|++.+.. -.|-...+..+=+. ...++.++++++++|++|..+.+|.+++..|...
T Consensus 69 flilSGla~glswl~Yf~ALk~G~as~VvPldk~-----svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail 136 (140)
T COG2510 69 FLILSGLAGGLSWLLYFRALKKGKASRVVPLDKT-----SVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL 136 (140)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccc-----cHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence 3323 4667899998866 22332222222211 3344669999999999999999999999998754
No 65
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=96.77 E-value=0.037 Score=45.93 Aligned_cols=43 Identities=14% Similarity=0.299 Sum_probs=37.1
Q ss_pred hHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccCCC
Q 017963 317 RVPI-TSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNSSTP 359 (363)
Q Consensus 317 ~lPv-~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~~~~ 359 (363)
.-|+ +.+++.++|+|+++..++++.++++.|+..-.+++...+
T Consensus 69 ~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~~ 112 (113)
T PF13536_consen 69 LSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTGA 112 (113)
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcccC
Confidence 3466 559999999999999999999999999999888876543
No 66
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.65 E-value=0.01 Score=59.21 Aligned_cols=64 Identities=9% Similarity=0.040 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHh
Q 017963 121 GFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTII 184 (363)
Q Consensus 121 Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll 184 (363)
|+...+.|..-.++++.+++.++++....+++++.++|+++++|++|+.++.|.++...|+.+.
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 3333333333336999999999999999999999999999999999999999999999998764
No 67
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.30 E-value=0.015 Score=47.15 Aligned_cols=54 Identities=22% Similarity=0.209 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhccCChhHH-HHHHhhhhHHHHHHHHHHhcccccHHHHHHHHH
Q 017963 123 LSAADNLMYAYAYAYLPASTA-ALLASSSLVFSTLFGYFLVKNKLNAAMINAVVI 176 (363)
Q Consensus 123 l~~~~n~ly~~gL~ylpvst~-sli~ssql~Ftalfs~~ilkek~t~~~i~svvl 176 (363)
.++...++++.+++++|.+++ .+......+.+.+.+.++.+|++|+.|+.++.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 477788899999999999986 777789999999999999999999999999876
No 68
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=95.61 E-value=0.27 Score=47.74 Aligned_cols=125 Identities=12% Similarity=0.173 Sum_probs=77.6
Q ss_pred hcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCC------CCCCcHHHHHHHHHHHHHHHHHHHH
Q 017963 57 VAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTF------PTPLDLKLTLAYIVLGFLSAADNLM 130 (363)
Q Consensus 57 ~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~------~~~~~~~l~~~~~~~Gll~~~~n~l 130 (363)
....-+..-.|.|-+++-+..=+.-....-+.|..+++.......+-.+ +.|.....+......| ..++++.
T Consensus 165 ~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~--~~g~~~i 242 (303)
T PF08449_consen 165 LDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTG--ALGQFFI 242 (303)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHH--HHHHHHH
Confidence 3334455556665555444422333345556666555554421111111 1233223333333333 4444555
Q ss_pred HHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHh
Q 017963 131 YAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTII 184 (363)
Q Consensus 131 y~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll 184 (363)
| .-.+..++-+.+++.++.-+++.++|+++.++++++.++.|+++.+.|..+=
T Consensus 243 ~-~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 243 F-YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred H-HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 5 5567789999999999999999999999999999999999999999997663
No 69
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.60 E-value=0.28 Score=49.19 Aligned_cols=115 Identities=17% Similarity=0.087 Sum_probs=79.5
Q ss_pred CCcchHHHHHHHhhhhHHHH----HHHhhcc--cccc----CC---CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 017963 73 GGTSKWIISWVAVAGWPLTA----LILLPTY--FVFK----TF---PTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLP 139 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~----~p~~~~~--~~~~----~~---~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylp 139 (363)
.|.+.+-..+.|..+.-+=. +.++... ++++ .+ +++...|-.+.+++.|++...+|+.|..|-+.++
T Consensus 206 ~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g 285 (345)
T PRK13499 206 LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLG 285 (345)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56777888888877443321 1112211 1111 01 2344567778889999999999999999988875
Q ss_pred hhHHH----HHHhhhhHHHHHHHHHHhccccc------HHHHHHHHHHHHHHHHhhccC
Q 017963 140 ASTAA----LLASSSLVFSTLFGYFLVKNKLN------AAMINAVVIITAAMTIIALDS 188 (363)
Q Consensus 140 vst~s----li~ssql~Ftalfs~~ilkek~t------~~~i~svvllt~Gavll~~~~ 188 (363)
+++.. +-.|+..++..+-+. ++||+=+ +..+.++++..+|+++++.+.
T Consensus 286 ~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 286 AQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred CccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 55444 444888888888888 5898877 677889999999998887654
No 70
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.54 E-value=0.088 Score=50.51 Aligned_cols=74 Identities=23% Similarity=0.187 Sum_probs=63.1
Q ss_pred CcHHHHHHHHHHHHHHHHHHH-HHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Q 017963 109 LDLKLTLAYIVLGFLSAADNL-MYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMT 182 (363)
Q Consensus 109 ~~~~l~~~~~~~Gll~~~~n~-ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gav 182 (363)
..+.++..+...|++...--| +=..+++.+|..+++++.+..|++.++-++++++|++|+.||.+++...++++
T Consensus 204 ~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 204 FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 466777777777777666555 67789999999999999999999999999999999999999999988776654
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.46 E-value=0.55 Score=40.88 Aligned_cols=127 Identities=19% Similarity=0.137 Sum_probs=76.8
Q ss_pred HHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 017963 49 VLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADN 128 (363)
Q Consensus 49 ~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n 128 (363)
++...++.+|...-.-+.+ . -|+..+-+.+.+..|+..+.+..++...++.++.++. ++.....-++|.....-+
T Consensus 7 ~~aG~~i~~q~~~N~~L~~---~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~-p~w~~lGG~lG~~~V~~~ 81 (138)
T PF04657_consen 7 LLAGALIALQAAFNGQLGK---A-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSV-PWWAYLGGLLGVFFVLSN 81 (138)
T ss_pred HHHHHHHHHHHHHHHHHHH---H-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccC-ChHHhccHHHHHHHHHHH
Confidence 3444445555433333332 2 3455666666778888888776666432211112222 333333455554444433
Q ss_pred HHHHHhhccCChhHH-HHHHhhhhHHHHHHHHH----HhcccccHHHHHHHHHHHHHHHH
Q 017963 129 LMYAYAYAYLPASTA-ALLASSSLVFSTLFGYF----LVKNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 129 ~ly~~gL~ylpvst~-sli~ssql~Ftalfs~~----ilkek~t~~~i~svvllt~Gavl 183 (363)
. +....+.++.. .++..-|++..+++..+ .-|+|+++.++.|++++.+|+.+
T Consensus 82 ~---~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 82 I---ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred H---HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3 34455566554 45567799999999987 68999999999999999999753
No 72
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=95.45 E-value=0.4 Score=46.78 Aligned_cols=136 Identities=16% Similarity=0.206 Sum_probs=81.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhH
Q 017963 201 YIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASY 280 (363)
Q Consensus 201 ~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y 280 (363)
..-|+++.+.|.++||+.=. .+| ..++-+ ..|+-.+=-.-+.++.++=+...+.|+++.+ ..++.+...
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~----y~k-ll~~~~---~~eIlahRviwS~~~~l~ll~~~r~~~~~~~---~~~~p~~~~ 73 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPL----YFK-LLEPLP---ATEILAHRVIWSFPFMLALLFLLRQWRELKQ---LLKQPKTLL 73 (293)
T ss_pred ccchhHHHHHHHHHHHHHHH----HHH-HHccCC---HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---HHhCcHHHH
Confidence 34599999999999999332 334 444433 3455544444444444444555566654432 233333222
Q ss_pred HHHHH--HHHHHHHHHHHhh-hhhhhhhhhhhHHHHHHhhHHHHH-HHHHHHhCCCCchhHHHHHHHHHHHHHHHHh
Q 017963 281 YLVLI--WGAITFQLGVLGG-TAVLFLASTVLAGILNAIRVPITS-IAAVILLHDPMSGFKILSLIVTFWGFGSYIY 353 (363)
Q Consensus 281 ~l~lv--~tav~~q~~~lgv-~glv~~~ssL~a~vi~~~~lPv~~-ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y 353 (363)
...+. -...+|.++.-.+ +|++-.+| +.+ ...|++. +++.++++|+++..|.++.+++..|+..-.+
T Consensus 74 ~~~l~a~li~~nW~lfiWAvn~g~~leaS--LGY----~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 74 MLALTALLIGLNWWLFIWAVNNGHVLEAS--LGY----FINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHHHHHHHhheecCCCchhHHH--hHH----HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 22121 2225788777553 34554422 111 1338855 9999999999999999999999999987644
No 73
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.41 E-value=0.039 Score=50.99 Aligned_cols=118 Identities=18% Similarity=0.182 Sum_probs=79.0
Q ss_pred hhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhcc--ccccC--CCCC----CcHHHHHHHHHHHHHHHHHHHHH
Q 017963 60 PASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTY--FVFKT--FPTP----LDLKLTLAYIVLGFLSAADNLMY 131 (363)
Q Consensus 60 ~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~--~~~~~--~~~~----~~~~l~~~~~~~Gll~~~~n~ly 131 (363)
+...=+.+.|.+++=+++=..-+.|....|...++....- ..... ...+ .....+.. ++..+....+.
T Consensus 94 ~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~a~~~~~v 169 (222)
T TIGR00803 94 LLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIV----GLLNVGGGLCI 169 (222)
T ss_pred HHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHH----HHHHHhcCcee
Confidence 3344456667776433322335666666666655532211 11111 1111 23333333 45677777788
Q ss_pred HHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHH
Q 017963 132 AYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAM 181 (363)
Q Consensus 132 ~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Ga 181 (363)
++-++|.+..+.++..+...++++++|+++++|++|..++.|+.+.+.|.
T Consensus 170 ~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~ 219 (222)
T TIGR00803 170 GGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLAT 219 (222)
T ss_pred eehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeee
Confidence 89999999999999999999999999999999999999999999887764
No 74
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.07 E-value=0.34 Score=46.93 Aligned_cols=104 Identities=24% Similarity=0.251 Sum_probs=74.3
Q ss_pred CCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhH
Q 017963 73 GGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLV 152 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~ 152 (363)
.+-+.|-.-+-|..|.-+-.+-+.... ++ +...|...-.+..|++.+..|+.|..+.+..-++++=.+.|+.++
T Consensus 160 ~~~~~~~~~lPqaiGm~i~a~i~~~~~---~~---~~~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vv 233 (269)
T PF06800_consen 160 FHVSGWSAFLPQAIGMLIGAFIFNLFS---KK---PFFEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVV 233 (269)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHhhcc---cc---cccccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHH
Confidence 445568888889888866443333221 11 111111222466699999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccHHHHH----HHHHHHHHHH
Q 017963 153 FSTLFGYFLVKNKLNAAMIN----AVVIITAAMT 182 (363)
Q Consensus 153 Ftalfs~~ilkek~t~~~i~----svvllt~Gav 182 (363)
.+.+.+.+++|||=+++++. |+++..+|++
T Consensus 234 IStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 234 ISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 99999999999999988654 4444444443
No 75
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=94.61 E-value=1.2 Score=38.42 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=27.9
Q ss_pred HHHHHHH--HhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017963 321 TSIAAVI--LLHDPMSGFKILSLIVTFWGFGSYIYG 354 (363)
Q Consensus 321 ~~ilAvl--~f~d~~~~~k~ig~~lvl~G~~~y~y~ 354 (363)
+.++++. +|||++|..|++|.++++.|+..-..+
T Consensus 88 v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 88 VYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 4455653 799999999999999999999886543
No 76
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=94.25 E-value=1.1 Score=44.81 Aligned_cols=144 Identities=12% Similarity=0.049 Sum_probs=97.4
Q ss_pred CCchhHHHHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHH
Q 017963 40 KPISHWILLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIV 119 (363)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~ 119 (363)
++..-.+++++..++-.+.++ +.. ++.++-++.=...++-.-|+.+..+......++. -+.-+...+.....+.
T Consensus 165 ~~i~GDll~l~~a~lya~~nV----~~E-~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~-i~~~~w~~~~~~~~v~ 238 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNV----LEE-KLVKKAPRVEFLGMLGLFGFIISGIQLAILERSG-IESIHWTSQVIGLLVG 238 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHH----HHH-HhcccCCHHHHHHHHHHHHHHHHHHHHHheehhh-hhccCCChhhHHHHHH
Confidence 445556666666666555443 334 3344556666678888888887766555432221 1111233344444444
Q ss_pred HHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCC
Q 017963 120 LGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSD 189 (363)
Q Consensus 120 ~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~ 189 (363)
..+.+.....+....+++.++....+=..|.-+++++++.++.++++++..+.|.++..+|.++....+.
T Consensus 239 ~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 239 YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence 4555555555667788888888888888899999999999999999999999999999999888755543
No 77
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=93.23 E-value=2.1 Score=36.51 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017963 318 VPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 318 lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~ 352 (363)
...+.+.++++|||++|..|.+++.+++.|+..--
T Consensus 68 ~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 68 ILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 34466889999999999999999999999997753
No 78
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.03 E-value=0.2 Score=42.37 Aligned_cols=62 Identities=19% Similarity=0.328 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHH-hhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Q 017963 122 FLSAADNLMYAYAYAYLPASTAALLA-SSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst~sli~-ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavl 183 (363)
++......+|.+.++..|.|...=+. ++.-+||++.++++.+|..++..+.|+++...|..+
T Consensus 49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34455556888999999999888774 999999999999999999999999999999998765
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=92.83 E-value=1.2 Score=37.41 Aligned_cols=69 Identities=22% Similarity=0.304 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhh-hhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 279 SYYLVLIWGAITFQLGVLGGTAVLF-LASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 279 ~y~l~lv~tav~~q~~~lgv~glv~-~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
.+.++++.-.+++.+....+..+-- .++++..+ .....+.+.++++|+|++|..|++++.+++.|+..-
T Consensus 32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~G----iG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTG----IGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH----HHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 3444555666666655555444322 33334444 233447799999999999999999999999998754
No 80
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=92.80 E-value=1.1 Score=37.60 Aligned_cols=34 Identities=9% Similarity=0.086 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 318 VPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 318 lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
...+.+.++++|+|++|+.|.+++.+++.|+..-
T Consensus 68 ~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l 101 (110)
T PRK09541 68 IVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVI 101 (110)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3446789999999999999999999999998875
No 81
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=92.61 E-value=1.5 Score=36.84 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhh-hhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017963 283 VLIWGAITFQLGVLGGTAVLF-LASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGS 350 (363)
Q Consensus 283 ~lv~tav~~q~~~lgv~glv~-~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~ 350 (363)
+++..++++.+....+..+-- .++++.++ .....+.+.++++|||++|..|.+++.+++.|+..
T Consensus 41 ~~~~~~~sf~~Ls~al~~lpvgvAYAvW~G----iG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~ 105 (109)
T PRK10650 41 SLAAVLAAFSALSQAVKGIDLSVAYALWGG----FGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM 105 (109)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHH----HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 344555555555554433222 22333333 23344678899999999999999999999999865
No 82
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=92.13 E-value=1.9 Score=42.40 Aligned_cols=36 Identities=11% Similarity=0.180 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHH
Q 017963 317 RVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYI 352 (363)
Q Consensus 317 ~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~ 352 (363)
.+..+.++|-+++||+++....+|.++++.|.....
T Consensus 86 ~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 86 SLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred hhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 445567899999999999999999999999988764
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=91.98 E-value=1.7 Score=36.16 Aligned_cols=65 Identities=20% Similarity=0.202 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhh-hhhhhhHHHHHHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 283 VLIWGAITFQLGVLGGTAVLF-LASTVLAGILNAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 283 ~lv~tav~~q~~~lgv~glv~-~~ssL~a~vi~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
+++...+++.+....+..+-- .++++.++ +....+.+.++++|||++|+.|++++.+++.|+..-
T Consensus 35 ~i~~~~~sf~~Ls~al~~ip~gvaYAvW~G----iG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 35 TVTAMIVSMALLAWAMKSLPVGTAYAVWTG----IGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHhhCCcHhHHHHHHH----HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 344555555555555433322 22333333 233446789999999999999999999999998764
No 84
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.73 E-value=1.6 Score=43.60 Aligned_cols=142 Identities=14% Similarity=0.210 Sum_probs=91.6
Q ss_pred CcchHHHHHHHhhhhHHHHHHHhhcccccc--C---CCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhH-HHHHH
Q 017963 74 GTSKWIISWVAVAGWPLTALILLPTYFVFK--T---FPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPAST-AALLA 147 (363)
Q Consensus 74 g~~~w~~t~vq~ag~p~l~~p~~~~~~~~~--~---~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst-~sli~ 147 (363)
-+=.|=+.|+.-.-|.-+++|....+..-. . +..|. ..+....++|++.+..+..|-.+++|+-+|. +++..
T Consensus 30 k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~--~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~l 107 (344)
T PF06379_consen 30 KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPA--STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIAL 107 (344)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCCh--hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHH
Confidence 333688888888888888888886543211 0 11121 3344467889999999999999999987753 23333
Q ss_pred hhhhHHHHHHHHHH-------hcccccHHHHHHHHHHHHHHHHhhccCC---CCCCCCCCcchhhhHHHHHHHHHHHHHH
Q 017963 148 SSSLVFSTLFGYFL-------VKNKLNAAMINAVVIITAAMTIIALDSD---SDRYGNITDRQYIMGFVWDILGSALHGL 217 (363)
Q Consensus 148 ssql~Ftalfs~~i-------lkek~t~~~i~svvllt~Gavll~~~~~---~~~~~~~s~~~~~~G~~l~L~Aa~l~gl 217 (363)
-+-.++-.+.--++ ..++-....+.|+++..+|.++.+.... .+..++.++.+.--|.++++.+.++++.
T Consensus 108 Gl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~ 187 (344)
T PF06379_consen 108 GLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSAC 187 (344)
T ss_pred HHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 33333333332222 2234456889999999999999864322 1222334455667899999998888877
No 85
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=91.58 E-value=2 Score=35.89 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=28.9
Q ss_pred HH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 017963 319 PI-TSIAAVILLHDPMSGFKILSLIVTFWGFGS 350 (363)
Q Consensus 319 Pv-~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~ 350 (363)
++ +.++++++|||++|..|++|.++++.|+..
T Consensus 74 ~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~ 106 (111)
T PRK15051 74 FVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVI 106 (111)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 44 669999999999999999999999999865
No 86
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=91.25 E-value=7.4 Score=33.80 Aligned_cols=123 Identities=17% Similarity=0.123 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhHHH-H
Q 017963 205 FVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTFKGGVASYYL-V 283 (363)
Q Consensus 205 ~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f~~g~~~y~l-~ 283 (363)
.++++.+.+.-++...++...-|+..+ ..+-.++....+++...+-.+..++. .. +..+.-++++++ -
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs------~~~as~i~~~~G~i~~~i~~~~~~~~-~~----~~~~~~p~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGS------PLVASFISFGVGFILLLIILLITGRP-SL----ASLSSVPWWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc------cHHHHHHHHHHHHHHHHHHHHHhccc-cc----chhccCChHHhccH
Confidence 455666666666655555555555421 23344446667777776655555542 22 333333444444 1
Q ss_pred HHHHH-HHHHHHHHhhhhhhhhhhhhhHHHHHHhhHHHHH--HHHHHHh--------CCCCchhHHHHHHHHHHHHH
Q 017963 284 LIWGA-ITFQLGVLGGTAVLFLASTVLAGILNAIRVPITS--IAAVILL--------HDPMSGFKILSLIVTFWGFG 349 (363)
Q Consensus 284 lv~ta-v~~q~~~lgv~glv~~~ssL~a~vi~~~~lPv~~--ilAvl~f--------~d~~~~~k~ig~~lvl~G~~ 349 (363)
+.... +.-....+.- -+...+....+.. +.+.++- .+++++.|++|.++.+.|..
T Consensus 72 ~lG~~~V~~~~~~vp~-----------lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPR-----------LGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHHHHHHhhh-----------hhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 11111 1111111111 1222222333333 2333322 37899999999999999975
No 87
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=86.72 E-value=0.42 Score=47.41 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHh
Q 017963 122 FLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTII 184 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll 184 (363)
+...+.|+.=..-+..+++-|+++....+-++..+.|+.+++++.|+.++.|..++.+|..+=
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY 305 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence 334444443338999999999999999999999999999999999999999999999997764
No 88
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=85.21 E-value=1.9 Score=43.61 Aligned_cols=69 Identities=14% Similarity=0.228 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCC
Q 017963 119 VLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSD 189 (363)
Q Consensus 119 ~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~ 189 (363)
++| ..+.+++|..|.-.+++-+.++=.+.|.+..+++-.++-++++|+..++|.+..++|-+++...+.
T Consensus 325 lig--tvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 325 LIG--TVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHH--HHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 455 788899999999999999999999999999999999999999999999999999999777654443
No 89
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.07 E-value=2.4 Score=40.61 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Q 017963 121 GFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 121 Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavl 183 (363)
++...+.|++-+.-..+-.+-+-|++.++.=.||.+.|++++.++++.+||.|-++.+.+..+
T Consensus 248 ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 248 AIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 566667777666777777788889999999999999999999999999999999998887543
No 90
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=77.16 E-value=79 Score=31.22 Aligned_cols=127 Identities=15% Similarity=0.154 Sum_probs=65.2
Q ss_pred ccCCCchhHHHHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhh---HHHHHHHhhccccccCCCCCC-cHH
Q 017963 37 YKRKPISHWILLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGW---PLTALILLPTYFVFKTFPTPL-DLK 112 (363)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~---p~l~~p~~~~~~~~~~~~~~~-~~~ 112 (363)
|...+.+.-...+.++.+++++.+.+.++++|+... |+--+.-..|- --+.+|....|. .+++.++. -+|
T Consensus 94 P~~~~~~~i~~tF~~ssIlLl~~Siss~iG~YiLap-----l~~~i~~~~gAaila~iviP~~~~y~-ln~~~~s~~~~R 167 (299)
T PF05884_consen 94 PEKLSTSSIVETFSWSSILLLGFSISSFIGGYILAP-----LFGIIFGPFGAAILAYIVIPLIAYYY-LNKEDGSLAESR 167 (299)
T ss_pred CcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHhcchhHHHHHHHHHHHHHHhh-cccccCchHHHH
Confidence 455666667777788888888888888888887643 33322222222 223556655542 11222222 123
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHH
Q 017963 113 --LTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVII 177 (363)
Q Consensus 113 --l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvll 177 (363)
++..++.=|++++ .+++|+....-= +....++++.+.-..+..+.-++.+.++.+..
T Consensus 168 ~~ll~~a~~QGvL~G-------a~ls~~~l~seP-f~~LT~iv~sfi~~~i~~~~~~R~~lLg~~vg 226 (299)
T PF05884_consen 168 LALLFFALFQGVLVG-------AGLSHLYLSSEP-FIALTPIVSSFIYPLIAGHGTNRQKLLGIVVG 226 (299)
T ss_pred HHHHHHHHHHHHHHH-------HHhhcccccCCc-HHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 3344444455554 334443333212 22333444444444455556677777766543
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=76.75 E-value=33 Score=27.50 Aligned_cols=26 Identities=15% Similarity=0.153 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHH
Q 017963 319 PITSIAAVILLHDPMSGFKILSLIVT 344 (363)
Q Consensus 319 Pv~~ilAvl~f~d~~~~~k~ig~~lv 344 (363)
..+.+.++++|||++|..|.+|..++
T Consensus 68 v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 68 VGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 44668899999999999999998874
No 92
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=74.91 E-value=63 Score=30.65 Aligned_cols=114 Identities=15% Similarity=0.152 Sum_probs=69.4
Q ss_pred hcchhhhhhhHHhHhcCCcchHHHHHH-HhhhhHHHHHHHhhccccccCCCC---CCcHHHHHHHHHHHHHHHHHHHHHH
Q 017963 57 VAFPASSLLSRVYYANGGTSKWIISWV-AVAGWPLTALILLPTYFVFKTFPT---PLDLKLTLAYIVLGFLSAADNLMYA 132 (363)
Q Consensus 57 ~g~~~~~Ll~r~y~~~gg~~~w~~t~v-q~ag~p~l~~p~~~~~~~~~~~~~---~~~~~l~~~~~~~Gll~~~~n~ly~ 132 (363)
+...+++...|..=+++ .+-|....- -.-|.+.-++..++....+-+++. -.+...+.. =+..+....+-+
T Consensus 125 ~S~~agVy~E~~lK~~~-~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~----i~~~a~gGllva 199 (244)
T PF04142_consen 125 LSGFAGVYFEKLLKRSN-VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIV----IFLQAIGGLLVA 199 (244)
T ss_pred HHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHH----HHHHHHhhHHHH
Confidence 34445555555544434 666766542 233344444443322111111111 122222222 234666677788
Q ss_pred HhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHH
Q 017963 133 YAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVV 175 (363)
Q Consensus 133 ~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svv 175 (363)
.-++|.+-..=..-.+...+.|+++++++++.++|..-+.|.+
T Consensus 200 ~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 200 FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 8899999999999999999999999999999999998877764
No 93
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=71.25 E-value=1.8 Score=41.57 Aligned_cols=103 Identities=20% Similarity=0.263 Sum_probs=73.0
Q ss_pred HHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHH
Q 017963 78 WIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLF 157 (363)
Q Consensus 78 w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalf 157 (363)
|-.-+=|..|..+-.+-+ .+. ++ .+...|-...-...|+..+..|..+..+-+..-++|+=-+.|+..+...+-
T Consensus 179 ~saiLPqAiGMv~~ali~--~~~---~~-~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiG 252 (288)
T COG4975 179 LSAILPQAIGMVIGALIL--GFF---KM-EKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIG 252 (288)
T ss_pred hhhhhHHHHHHHHHHHHH--hhc---cc-ccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecc
Confidence 455555666655543322 111 11 222334444467789999999997778888888888888999999999999
Q ss_pred HHHHhcccccHHHH----HHHHHHHHHHHHhhc
Q 017963 158 GYFLVKNKLNAAMI----NAVVIITAAMTIIAL 186 (363)
Q Consensus 158 s~~ilkek~t~~~i----~svvllt~Gavll~~ 186 (363)
+-+++|||=|++++ .|+++..+|+++++.
T Consensus 253 GIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 253 GILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred eEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 99999999999875 566677777776643
No 94
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=66.77 E-value=88 Score=31.14 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhc-ccccchh-hhhhhcccchhHHHHHHH
Q 017963 209 ILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSK-DFQGMKS-EAKTFKGGVASYYLVLIW 286 (363)
Q Consensus 209 L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g-~~~~l~~-e~~~f~~g~~~y~l~lv~ 286 (363)
+.+++.|++.-+++-++-|-++..+.|..-+-+..+.++.+++...++-...= +++.+.. +++.|---...|+..++.
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 66888899988888888898888777764444444445555444443222110 2223322 233331111222221211
Q ss_pred HHHHHHHHHHhhhhhhhh---hhhhhHHHHHHhhHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhccc
Q 017963 287 GAITFQLGVLGGTAVLFL---ASTVLAGILNAIRVPI-TSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNS 356 (363)
Q Consensus 287 tav~~q~~~lgv~glv~~---~ssL~a~vi~~~~lPv-~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~ 356 (363)
|..++-.. ...++.+ .-|+ +.+.-+++||-+++..-..+..+.+.|-..+.....
T Consensus 94 ----------~~~slk~lnVpm~tv~kn-----~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~ 152 (314)
T KOG1444|consen 94 ----------GSKSLKYLNVPMFTVFKN-----LTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL 152 (314)
T ss_pred ----------ccccccccCchHHHHHhh-----chHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc
Confidence 11111111 1122233 3355 669999999988888777888777777666654443
No 95
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=66.51 E-value=3.5 Score=38.55 Aligned_cols=41 Identities=34% Similarity=0.453 Sum_probs=34.1
Q ss_pred HHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhc
Q 017963 314 NAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYG 354 (363)
Q Consensus 314 ~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~ 354 (363)
+.+-...+-++|+++++|++.+.|+++.++++-|+....|.
T Consensus 86 ~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 86 FACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred HHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 34445667799999999999999999999999998876553
No 96
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=65.90 E-value=0.68 Score=44.43 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=82.7
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH-HhhhhHHHHHHHHHHhcccccHHHH----HHHHHHHHHHHH
Q 017963 109 LDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALL-ASSSLVFSTLFGYFLVKNKLNAAMI----NAVVIITAAMTI 183 (363)
Q Consensus 109 ~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli-~ssql~Ftalfs~~ilkek~t~~~i----~svvllt~Gavl 183 (363)
++.+.+.+++..|++.+..|..=.-+.++..+|-+.=+ .-+|++-+-+|+++.++|=-|..++ .++++..+|..+
T Consensus 54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l 133 (288)
T COG4975 54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL 133 (288)
T ss_pred cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence 47788999999999999999866677777555544322 3579999999999999998888775 466667777666
Q ss_pred hhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 017963 184 IALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALS 222 (363)
Q Consensus 184 l~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~ 222 (363)
-+..++.+ .++++.+++--|+...+.+++.|-.|-.+.
T Consensus 134 Ts~~~~~n-k~~~~~~n~kkgi~~L~iSt~GYv~yvvl~ 171 (288)
T COG4975 134 TSKQDRNN-KEEENPSNLKKGIVILLISTLGYVGYVVLF 171 (288)
T ss_pred eeeecccc-ccccChHhhhhheeeeeeeccceeeeEeee
Confidence 55554432 223445567778888888888888877774
No 97
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=61.76 E-value=86 Score=31.63 Aligned_cols=80 Identities=21% Similarity=0.299 Sum_probs=56.5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCC----hhHHHHHHhhhhHHHHHHHHHHhcc------cccHHHHHHHHH
Q 017963 107 TPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLP----ASTAALLASSSLVFSTLFGYFLVKN------KLNAAMINAVVI 176 (363)
Q Consensus 107 ~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylp----vst~sli~ssql~Ftalfs~~ilke------k~t~~~i~svvl 176 (363)
+|...+-.+.+++.|++.-.+++.|..|=+.++ .+...+..++-++|.-+-+... || |--+.-+.|+++
T Consensus 252 ~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l-kEWKg~s~kt~~vl~~G~~v 330 (344)
T PF06379_consen 252 KPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL-KEWKGASKKTIRVLVLGIAV 330 (344)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH-HHhccCCcccHHHHHHHHHH
Confidence 455667778889999999999999999988877 5566777777766666666543 33 444455666666
Q ss_pred HHHHHHHhhcc
Q 017963 177 ITAAMTIIALD 187 (363)
Q Consensus 177 lt~Gavll~~~ 187 (363)
+..++++++.+
T Consensus 331 lI~s~~ivG~G 341 (344)
T PF06379_consen 331 LILSVVIVGYG 341 (344)
T ss_pred HHHHHHHHhcc
Confidence 66666666544
No 98
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=58.44 E-value=49 Score=32.60 Aligned_cols=49 Identities=14% Similarity=0.120 Sum_probs=41.0
Q ss_pred CChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhc
Q 017963 138 LPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIAL 186 (363)
Q Consensus 138 lpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~ 186 (363)
++.=|-+++...-=.++.++|.+.++..+|++.|+|..+.++|..+-+.
T Consensus 266 ~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 266 TSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred ecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3344455667777889999999999999999999999999999988653
No 99
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=55.75 E-value=23 Score=33.95 Aligned_cols=128 Identities=16% Similarity=0.258 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhccCC----hhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcch
Q 017963 125 AADNLMYAYAYAYLP----ASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQ 200 (363)
Q Consensus 125 ~~~n~ly~~gL~ylp----vst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~ 200 (363)
.+--++| ||+...+ ...-++=+..+.++..+|-+.=-||| +......+.+...|+.++......+ +..++.
T Consensus 51 ~~~lWl~-YG~~~~~d~llitIN~~G~~ie~~Yi~~f~~ya~~k~-~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~ 125 (243)
T KOG1623|consen 51 SCSLWLY-YGLLKVHDYLLITINGIGLVIETVYISIFLYYAPKKK-TVKIVLALVLGVIGLIILLTLLLFH---DPERRV 125 (243)
T ss_pred HHHHHHH-hhhhccCceEEEEEehhcHHHHHHHHHHHheecCchh-eeEeeehHHHHHHHHHHHHHHHhcC---Ccceee
Confidence 3344566 7743331 12222334457777888888777887 5555556666666655543222111 113446
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-hhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017963 201 YIMGFVWDILGSALHGLIFALSELVFVKLVGRRSF-HVVLEQQVMVSLFAFAFTTIGVVVSKD 262 (363)
Q Consensus 201 ~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~-~~vle~q~~~~l~a~~~~~vg~~~~g~ 262 (363)
..+|.+|+...-..||.=+..+ +|++|+.+- .+..-+++...+.+..=++.|.+. +|
T Consensus 126 ~~lG~vc~~~nI~~~~sPL~~m----~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli-~D 183 (243)
T KOG1623|consen 126 SVLGIVCAVFNISMFAAPLSVI----RKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLI-KD 183 (243)
T ss_pred eeeehhhhhhhHHhhhccHHhh----hhheecCceeeechHHHHHHHHHHHHHHHHHHHh-cC
Confidence 7899999999999999855554 566664331 234444555555555556667777 45
No 100
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=54.43 E-value=75 Score=29.53 Aligned_cols=63 Identities=16% Similarity=0.261 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHh---hhhHHHHHHHhhccccccCCCCCCcHHHHHH
Q 017963 47 LLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAV---AGWPLTALILLPTYFVFKTFPTPLDLKLTLA 116 (363)
Q Consensus 47 ~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~---ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~ 116 (363)
++++..++++-|-+ -||+.+-.-+=++|++-+ +||...+.-.+.++.+..++.||.+.|-+++
T Consensus 102 Ll~lg~~aLlsgit-------aff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv 167 (226)
T COG4858 102 LLFLGAMALLSGIT-------AFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLV 167 (226)
T ss_pred HHHHHHHHHHHHHH-------HHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHH
Confidence 56666666665533 367777777767777654 4777665555544333334467776666555
No 101
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=53.27 E-value=68 Score=30.78 Aligned_cols=130 Identities=12% Similarity=0.059 Sum_probs=84.4
Q ss_pred cchhhhhhhHHhHhcCCcchHHHHHH-HhhhhHHHHHHHhhccccccCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017963 58 AFPASSLLSRVYYANGGTSKWIISWV-AVAGWPLTALILLPTYFVFKTF-PTPLDLKLTLAYIVLGFLSAADNLMYAYAY 135 (363)
Q Consensus 58 g~~~~~Ll~r~y~~~gg~~~w~~t~v-q~ag~p~l~~p~~~~~~~~~~~-~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL 135 (363)
-+++-+|.+|---+..+.++.=.-+- ..-..|+++..-++.--..... ........+..-+..|+...+-.+.-++-+
T Consensus 166 ssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcv 245 (309)
T COG5070 166 SSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCV 245 (309)
T ss_pred hHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeE
Confidence 35666788886555555444322222 2234566655444321101110 112222333344556877777788888888
Q ss_pred ccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhcc
Q 017963 136 AYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALD 187 (363)
Q Consensus 136 ~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~ 187 (363)
+-++-.++|.+.++.=.--++-+.+++.++.|+.++.++.+.+.+.++-+.+
T Consensus 246 rVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 246 RVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred eehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988888889999999999999999999988877765544
No 102
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=50.00 E-value=20 Score=35.50 Aligned_cols=73 Identities=14% Similarity=0.219 Sum_probs=58.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Q 017963 108 PLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 108 ~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavl 183 (363)
|--.+..+.+..+| ...+++.| +-++.--+-+.+.|..+-=+|++++|.+..+++++..|+.++.+.+.|..+
T Consensus 238 p~~~~Di~l~s~~g--avGQ~FI~-~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 238 PDVAFDILLYSTCG--AVGQLFIF-YTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhHHHHHHHHHHhh--hhhhheeh-hhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 44445556667777 67777777 777777777888999999999999999999999999999999888777543
No 103
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=42.83 E-value=14 Score=36.32 Aligned_cols=110 Identities=13% Similarity=0.117 Sum_probs=78.6
Q ss_pred CCcchHHHHHHHhhhhHHHHHHHhhcccccc---CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhh
Q 017963 73 GGTSKWIISWVAVAGWPLTALILLPTYFVFK---TFPTPLDLKLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASS 149 (363)
Q Consensus 73 gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~---~~~~~~~~~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ss 149 (363)
-|+..|..|+....---++.+|+.+....-. .-+.-...+.+.+-.+.|+.-..-|+.-.+-++.++|-||.+=.+.
T Consensus 211 v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTA 290 (347)
T KOG1442|consen 211 VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTA 290 (347)
T ss_pred ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhH
Confidence 6888999999999999999999987632111 1112224455566566676666667766677888999999999999
Q ss_pred hhHHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Q 017963 150 SLVFSTLFGYFLVKNKLNAAMINAVVIITAAMT 182 (363)
Q Consensus 150 ql~Ftalfs~~ilkek~t~~~i~svvllt~Gav 182 (363)
+.+--.+++..+.+|.-+...|-|.++...|..
T Consensus 291 ka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~ 323 (347)
T KOG1442|consen 291 KAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSL 323 (347)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeeeEEEEehhH
Confidence 888888888888777766666655555444443
No 104
>KOG4026 consensus Uncharacterized conserved protein [Function unknown]
Probab=42.58 E-value=2.9e+02 Score=25.94 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcc-cc--cchh----hhhhhcccc----hhHHHHHHHHHHHHHHHHH
Q 017963 237 VVLEQQVMVSLFAFAFTTIGVVVSKD-FQ--GMKS----EAKTFKGGV----ASYYLVLIWGAITFQLGVL 296 (363)
Q Consensus 237 ~vle~q~~~~l~a~~~~~vg~~~~g~-~~--~l~~----e~~~f~~g~----~~y~l~lv~tav~~q~~~l 296 (363)
.+.++-.|+..+|.+...+|.++.=+ |. .+++ ++..|+.|. |+|+.+.+....+..++.+
T Consensus 108 si~~~cg~~q~~a~l~milGc~lyP~GW~s~~vr~~CG~~a~ky~lG~CsIgWaY~lAIig~~daliL~~l 178 (207)
T KOG4026|consen 108 SIFNMCGWMQGIAGLCMILGCALYPDGWDSPEVRRMCGAKAGKYYLGDCSIGWAYYLAIIGILDALILAFL 178 (207)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcCCccCCHHHHHHhccccCCccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 36788888899999888888887542 21 1211 122455554 7888866666544444443
No 105
>PF10361 DUF2434: Protein of unknown function (DUF2434); InterPro: IPR018830 This entry represents a family of proteins conserved in fungi. Their function is not known.
Probab=39.13 E-value=2.3e+02 Score=28.00 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=52.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------cchhHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhhhh
Q 017963 200 QYIMGFVWDILGSALHGLIFALSELVFVKLVGRR------SFHVVLEQQVMVSLFAFAFTTIGVVVSKDFQGMKSEAKTF 273 (363)
Q Consensus 200 ~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~------~~~~vle~q~~~~l~a~~~~~vg~~~~g~~~~l~~e~~~f 273 (363)
+-.+|+..+. ++|+-+.+.=.-.+|.+|++ .+..-..||-|..++-....+++.+.+-| ++ +.+
T Consensus 46 rg~vGI~fav----~f~i~lvltLvnL~KHG~~~lp~eKRf~~iGRRwqWyW~~fv~a~~~iS~f~~ID---VD---R~y 115 (296)
T PF10361_consen 46 RGSVGIAFAV----LFAIALVLTLVNLRKHGRLYLPLEKRFYPIGRRWQWYWMLFVCACGLISLFMSID---VD---RYY 115 (296)
T ss_pred cchhHHHHHH----HHHHHHHHHHHHHHHhhhhcCCchhcccccchhHHHHHHHHHHHHHHHhhheeee---ec---HHh
Confidence 3345554433 33333333444467777653 23345789999888888777788887765 22 233
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 017963 274 KGGVASYYLVLIWGAITFQLGVLGGTAVLFL 304 (363)
Q Consensus 274 ~~g~~~y~l~lv~tav~~q~~~lgv~glv~~ 304 (363)
-.|-+ ++-+.+-|+++..|...++=+
T Consensus 116 l~~~p-----iil~sfF~~l~~~~~lA~vWE 141 (296)
T PF10361_consen 116 LQGLP-----IILQSFFWYLMQPGTLAAVWE 141 (296)
T ss_pred ccccc-----HHHHHHHHHHHHHHHHHHHHH
Confidence 23332 556667777777776666554
No 106
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=38.44 E-value=3.2e+02 Score=25.12 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017963 203 MGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKD 262 (363)
Q Consensus 203 ~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~ 262 (363)
-|...++.+|...+.....- | +.+|++.. +...++++..++..-...+||
T Consensus 25 ~~L~~aliaA~~~a~~~~v~----R-L~r~~~~~-----~a~~gl~gV~i~a~~A~~tG~ 74 (187)
T PF11361_consen 25 FGLTPALIAALAVAVVIVVW----R-LVRRESVQ-----PALSGLFGVAISAAIAWRTGS 74 (187)
T ss_pred cchHHHHHHHHHHHHHHHHH----H-HHhcCccH-----HHHHHHHHHHHHHHHHHHHCC
Confidence 35557777888888765553 3 33444422 345777777777754555555
No 107
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=37.69 E-value=2.7e+02 Score=27.63 Aligned_cols=128 Identities=11% Similarity=0.168 Sum_probs=73.7
Q ss_pred HHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCC----CCCC-cHHHHHHHHHHHHHHHHHH
Q 017963 54 AMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTF----PTPL-DLKLTLAYIVLGFLSAADN 128 (363)
Q Consensus 54 ~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~----~~~~-~~~l~~~~~~~Gll~~~~n 128 (363)
.++.-...+-+=..-...+++++-=+.-.--..|+|.++.|..+.----+.- ..|. +--...+-.+.| +++.+.
T Consensus 198 ALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~g-ylG~~~ 276 (367)
T KOG1582|consen 198 ALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAG-YLGIVF 276 (367)
T ss_pred HHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHh-HhhHHH
Confidence 3333334444444555556666522222223468999999988742100000 1122 222222222223 222232
Q ss_pred HHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHh
Q 017963 129 LMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTII 184 (363)
Q Consensus 129 ~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll 184 (363)
.+--..+ --+.++..+.+..=+.|.++|++++.+++|-.-.-|..+...|..+=
T Consensus 277 VLalI~~--fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln 330 (367)
T KOG1582|consen 277 VLALIKL--FGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLN 330 (367)
T ss_pred HHHHHHH--hchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhh
Confidence 2222222 36667778888888999999999999999999999999999997663
No 108
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=34.95 E-value=13 Score=36.59 Aligned_cols=129 Identities=13% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHH--HHHhcccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcc
Q 017963 122 FLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFG--YFLVKNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDR 199 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs--~~ilkek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~ 199 (363)
++++.-.++| .=++-++-+..+++++..++...|.- ++|.|+-+-+.-..++++.++-..+..+-. .+++
T Consensus 32 ll~ail~w~~-iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~t-------LtGQ 103 (381)
T PF05297_consen 32 LLVAILVWFF-IIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWT-------LTGQ 103 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHH-HHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHH-------hhcc
Confidence 3445555565 44444555556666665554443332 333344456777777776655433332222 1233
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHH-HHHHHHHHhhccc
Q 017963 200 QYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAF-AFTTIGVVVSKDF 263 (363)
Q Consensus 200 ~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~-~~~~vg~~~~g~~ 263 (363)
.-++|+++....+.+-=..+++++ +.+++..+++--+.|+.+++-. +++.+.+.....|
T Consensus 104 ~LF~Gi~~l~l~~lLaL~vW~Ym~-----lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L~qaW 163 (381)
T PF05297_consen 104 TLFVGIVILFLCCLLALGVWFYMW-----LLRELGASFWTILAFCLAFLLAIVLLIIAVLLHQAW 163 (381)
T ss_dssp -----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467787765544433333333333 3333444444334444444333 3333555555444
No 109
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=34.64 E-value=11 Score=36.88 Aligned_cols=70 Identities=13% Similarity=0.254 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhc
Q 017963 117 YIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIAL 186 (363)
Q Consensus 117 ~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~ 186 (363)
.+.+|+.-..+|.+-..|++-=-++--++-..+|++|..++-.+++++-.|++.+.|.++...+.+..+.
T Consensus 256 ~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 256 FVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred EEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 3456777788888888999987777788999999999999999999999999999999887666555543
No 110
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=34.34 E-value=3.7e+02 Score=24.61 Aligned_cols=15 Identities=27% Similarity=0.273 Sum_probs=8.4
Q ss_pred HHHHHHHHHhccccc
Q 017963 153 FSTLFGYFLVKNKLN 167 (363)
Q Consensus 153 Ftalfs~~ilkek~t 167 (363)
..++....++|+|++
T Consensus 188 ~i~~~~~~~lkkk~~ 202 (206)
T PF06570_consen 188 VIAFALRFYLKKKYN 202 (206)
T ss_pred HHHHHHHHHHHHHhC
Confidence 344445566666665
No 111
>PF03631 Virul_fac_BrkB: Virulence factor BrkB; InterPro: IPR017039 This entry represents the uncharacterised protein family UPF0761. It includes the E. coli gene product of yihY, and was previously thought to be a family of tRNA-processing ribonuclease BN proteins []. This has been shown to be incorrect [].; GO: 0004540 ribonuclease activity
Probab=34.12 E-value=3.9e+02 Score=24.87 Aligned_cols=27 Identities=4% Similarity=-0.198 Sum_probs=13.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017963 110 DLKLTLAYIVLGFLSAADNLMYAYAYA 136 (363)
Q Consensus 110 ~~~l~~~~~~~Gll~~~~n~ly~~gL~ 136 (363)
++..+.-++..++....-+..|..=++
T Consensus 191 ~~~~~~Ga~~~~~~~~~~~~~f~~y~~ 217 (260)
T PF03631_consen 191 WRAALPGALFAAVLWFLLSYGFSLYLS 217 (260)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455555556555655544343
No 112
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.83 E-value=3.4e+02 Score=24.12 Aligned_cols=55 Identities=22% Similarity=0.377 Sum_probs=34.4
Q ss_pred Hhhhhhhhhhhhhh----HHHHHHhhHHHHH-HHHHHHh---------CCCCchhHHHHHHHHHHHHHH
Q 017963 296 LGGTAVLFLASTVL----AGILNAIRVPITS-IAAVILL---------HDPMSGFKILSLIVTFWGFGS 350 (363)
Q Consensus 296 lgv~glv~~~ssL~----a~vi~~~~lPv~~-ilAvl~f---------~d~~~~~k~ig~~lvl~G~~~ 350 (363)
=|+.|..+.+++.+ -+...+...++.. +++-++. ..++|..|.+|.++++.|...
T Consensus 75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 34566666555554 3344555556655 4433333 268999999999999999433
No 113
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=31.09 E-value=62 Score=27.37 Aligned_cols=61 Identities=20% Similarity=0.301 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhhccCChhHHH-HHHhhhhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Q 017963 123 LSAADNLMYAYAYAYLPASTAA-LLASSSLVFSTLFGYFLVKNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 123 l~~~~n~ly~~gL~ylpvst~s-li~ssql~Ftalfs~~ilkek~t~~~i~svvllt~Gavl 183 (363)
+.-....+|..-++..|.+.+. +..++.-+||++++..+--|-...+.+.|..+..+|..+
T Consensus 61 lNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 61 LNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 3444455777777777776554 455678899999999887777777788888888877654
No 114
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=30.00 E-value=4.2e+02 Score=23.94 Aligned_cols=115 Identities=16% Similarity=0.144 Sum_probs=53.4
Q ss_pred chhHHHHHHHHHHHHhcchhhhhhhHHhHhcCCcchHHHHHHHhhhhHHHHHHHhhccccccCCCCCCcHHHHHHHHHHH
Q 017963 42 ISHWILLVLSSAAMLVAFPASSLLSRVYYANGGTSKWIISWVAVAGWPLTALILLPTYFVFKTFPTPLDLKLTLAYIVLG 121 (363)
Q Consensus 42 ~~~~~~~~~~~~~~~~g~~~~~Ll~r~y~~~gg~~~w~~t~vq~ag~p~l~~p~~~~~~~~~~~~~~~~~~l~~~~~~~G 121 (363)
+.......+.+..-++|...+.++ +.+..+..+++|....+-....-++...++... ..+.. .. ...-.+..
T Consensus 46 ~~~~~~~~~~i~~F~~G~~~~~~i-~~~~~~~~~~~~~~~~l~~~~~ll~~~~~~~~~----~~~~~--~~-~~~~~~la 117 (209)
T PF06912_consen 46 WSGALRYLLAILSFILGAFLAGLI-VRRSRRRRRRRWYRILLLLEAILLLIAALLPPA----FPPHG--HR-ILAIFLLA 117 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhccccchhHHHHHHHHHHHHHHHHHHHHHHh----cccch--HH-HHHHHHHH
Confidence 334445556666666676666666 223333334444333322222222222222211 10100 12 22224456
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHhccc
Q 017963 122 FLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLVKNK 165 (363)
Q Consensus 122 ll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~ilkek 165 (363)
+.++.+|-.+ ..+.-.+..|.-+.....=....+..++.-|+|
T Consensus 118 famg~Qn~~~-~~~~g~~~~Tt~~TG~l~~~~~~l~~~~~~~~~ 160 (209)
T PF06912_consen 118 FAMGMQNAAF-RRLGGVSIRTTFMTGNLTDLGIDLARYLRGKDR 160 (209)
T ss_pred HHHHHHHHHH-HHcCCCcccchhhHhhHHHHHHHHHHHHhCCch
Confidence 7799999988 444444554544444444444444555555555
No 115
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.37 E-value=19 Score=35.98 Aligned_cols=37 Identities=24% Similarity=0.351 Sum_probs=31.4
Q ss_pred HhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 315 AIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 315 ~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
++.++.++++|.++++|+++..-.+|.++++.|-..-
T Consensus 98 Alsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 98 ALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 3456778899999999999999999999999876655
No 116
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.88 E-value=4.4e+02 Score=23.47 Aligned_cols=70 Identities=21% Similarity=0.264 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhhHHHHHHHHHHh----cccccHHHHHHHHHHHHHHHH
Q 017963 112 KLTLAYIVLGFLSAADNLMYAYAYAYLPASTAALLASSSLVFSTLFGYFLV----KNKLNAAMINAVVIITAAMTI 183 (363)
Q Consensus 112 ~l~~~~~~~Gll~~~~n~ly~~gL~ylpvst~sli~ssql~Ftalfs~~il----kek~t~~~i~svvllt~Gavl 183 (363)
+...+.-++|..+..-|.+-.-.+- .+-|-.++.+.|++..++.--|=. ++++++.++.|++++.+|..+
T Consensus 70 wW~~~GG~lGa~~vt~s~~l~p~lG--a~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 70 WWAWIGGLLGAIFVTSSILLAPRLG--AATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred hHHHHccchhhhhhhhhHHhccchh--HHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 3333445666666665554423332 456677888999999999876644 599999999999999999444
No 117
>PRK01844 hypothetical protein; Provisional
Probab=26.22 E-value=76 Score=24.81 Aligned_cols=28 Identities=18% Similarity=0.507 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhcchhhhhhhHHhHhc
Q 017963 45 WILLVLSSAAMLVAFPASSLLSRVYYAN 72 (363)
Q Consensus 45 ~~~~~~~~~~~~~g~~~~~Ll~r~y~~~ 72 (363)
|+.+.+-++.+++|-.++-.+.|.|+.+
T Consensus 4 ~~~I~l~I~~li~G~~~Gff~ark~~~k 31 (72)
T PRK01844 4 WLGILVGVVALVAGVALGFFIARKYMMN 31 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677789999999999999999875
No 118
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=26.11 E-value=95 Score=26.11 Aligned_cols=30 Identities=10% Similarity=0.170 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHH
Q 017963 318 VPITSIAAVILLHDPMSGFKILSLIVTFWG 347 (363)
Q Consensus 318 lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G 347 (363)
+.+...+++++++|++++....|.++.+.+
T Consensus 73 L~vF~~Fsv~~l~E~l~~n~l~af~~i~~a 102 (108)
T PF04342_consen 73 LVVFAPFSVFYLGEPLKWNYLWAFLCILGA 102 (108)
T ss_pred hheeHHHHHHHhCCCccHHHHHHHHHHHHh
Confidence 345568889999999999999999888754
No 119
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=26.07 E-value=2.2e+02 Score=25.78 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Q 017963 173 AVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAF 252 (363)
Q Consensus 173 svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~ 252 (363)
+++.+..|.-++....--| +..+++|..+|-.+.+.+-++.+. +-+.|--+.+..--..-....+|--+.|+..
T Consensus 94 AVV~AIFGLElLmvSQvcE--d~~SrrKWamGs~LlLvsfvlSs~----GllsFviLL~~~vtl~GFTL~fWCeFtAsFL 167 (184)
T PF15108_consen 94 AVVVAIFGLELLMVSQVCE--DAHSRRKWAMGSVLLLVSFVLSSG----GLLSFVILLRNQVTLIGFTLMFWCEFTASFL 167 (184)
T ss_pred HHHHHHHhHHHHHHHHHHh--cchhhhhhhhhhHHHHHHHHHhcc----cHHHHHHHHhcchhhhhhHHHHHHHHHHHHH
Confidence 4455555654443322111 134678889999999988887776 4344444444332223456778888888765
Q ss_pred HHH
Q 017963 253 TTI 255 (363)
Q Consensus 253 ~~v 255 (363)
+..
T Consensus 168 fFL 170 (184)
T PF15108_consen 168 FFL 170 (184)
T ss_pred HHH
Confidence 554
No 120
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=25.80 E-value=73 Score=26.97 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=27.4
Q ss_pred HHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 017963 314 NAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFG 349 (363)
Q Consensus 314 ~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~ 349 (363)
.++....+.+.+.++.+|..+....+|+++++.|+.
T Consensus 75 Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~ 110 (113)
T PF10639_consen 75 NSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVA 110 (113)
T ss_pred hHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCee
Confidence 344445566778777777778888999999999875
No 121
>COG4711 Predicted membrane protein [Function unknown]
Probab=25.03 E-value=5.9e+02 Score=24.01 Aligned_cols=92 Identities=9% Similarity=0.086 Sum_probs=50.3
Q ss_pred HHHhcccccHHHHHHHHHHHHHHHHhhccCC--CCCCCCCCcchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 017963 159 YFLVKNKLNAAMINAVVIITAAMTIIALDSD--SDRYGNITDRQY-IMGFVWDILGSALHGLIFALSELVFVKLVGRRSF 235 (363)
Q Consensus 159 ~~ilkek~t~~~i~svvllt~Gavll~~~~~--~~~~~~~s~~~~-~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~ 235 (363)
...+.+|.|+...+.+++.+++..-...... ++.++-..+..+ -.=+.-++..+....+..+++=..|.+..+. +.
T Consensus 114 vwllA~~isp~h~lal~~~~l~I~y~fvy~a~f~~~~~~~~~~g~vp~rl~~tmv~y~~~~l~~~y~l~~f~~~~~~-~~ 192 (217)
T COG4711 114 VWLLAYRISPYHSLALVLVVLVIMYSFVYTAKFGNDKKREEGAGFVPRRLRTTMVIYFVSSLASIYMLGIFTRFDFT-TV 192 (217)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccceeeeehHHHHHHHHHHHHHHHHHHHhhhhhhhh-HH
Confidence 4567889999999999888877654432221 111111111111 1233445555555556555666667777332 34
Q ss_pred hhHHHHHHHHHHHHHH
Q 017963 236 HVVLEQQVMVSLFAFA 251 (363)
Q Consensus 236 ~~vle~q~~~~l~a~~ 251 (363)
+..+|-....+++|++
T Consensus 193 t~~i~At~vl~~favI 208 (217)
T COG4711 193 TQAIKATLVLGLFAVI 208 (217)
T ss_pred HHHHHHHHHHccHHHH
Confidence 4555555555555544
No 122
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=24.68 E-value=89 Score=26.28 Aligned_cols=27 Identities=22% Similarity=0.230 Sum_probs=22.0
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHH
Q 017963 154 STLFGYFLVKNKLNAAMINAVVIITAA 180 (363)
Q Consensus 154 talfs~~ilkek~t~~~i~svvllt~G 180 (363)
-+.|+.+.+||++++..+.|-+.+..+
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~a 102 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGA 102 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHh
Confidence 357888999999999999988777444
No 123
>PF01098 FTSW_RODA_SPOVE: Cell cycle protein; InterPro: IPR001182 A number of prokaryotic integral membrane proteins involved in cell cycle processes have been found to be structurally related [, ]. These proteins include, the Escherichia coli and related bacteria cell division protein ftsW and the rod shape-determining protein rodA (or mrdB), the Bacillus subtilis stage V sporulation protein E (spoVE), the B. subtilis hypothetical proteins ywcF and ylaO and the Cyanophora paradoxa cyanelle ftsW homolog.; GO: 0007049 cell cycle, 0016021 integral to membrane
Probab=24.51 E-value=1.9e+02 Score=28.69 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=23.2
Q ss_pred hHhcCCcchHHH---HHHHhhhhHHHHHHHhhcc
Q 017963 69 YYANGGTSKWII---SWVAVAGWPLTALILLPTY 99 (363)
Q Consensus 69 y~~~gg~~~w~~---t~vq~ag~p~l~~p~~~~~ 99 (363)
-.+.+|.|+|+. =-+|.+++.++.+++++..
T Consensus 85 g~~v~Ga~rWi~lG~~siQPsE~~Ki~~il~lA~ 118 (358)
T PF01098_consen 85 GTEVNGARRWIRLGGFSIQPSEFAKILLILFLAG 118 (358)
T ss_pred ccccCCceEEEEeeeeccchHHHHHHHHHHHHHH
Confidence 345588899974 2459999999988887643
No 124
>PF11293 DUF3094: Protein of unknown function (DUF3094); InterPro: IPR021444 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=24.01 E-value=1.1e+02 Score=22.68 Aligned_cols=38 Identities=29% Similarity=0.353 Sum_probs=22.5
Q ss_pred cccccccccCCCchhHHHHHHHHHHHHhcchhhhhhhH
Q 017963 30 KTLAWESYKRKPISHWILLVLSSAAMLVAFPASSLLSR 67 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ll~r 67 (363)
-..+...-++||.|-|.++++-+..+..=.-.+-+++|
T Consensus 16 L~a~~~~VER~PFrP~~Ll~~li~Vv~gl~llS~ll~~ 53 (55)
T PF11293_consen 16 LQAGVNQVERKPFRPWRLLIVLIVVVIGLGLLSRLLSR 53 (55)
T ss_pred HhCCCCccccCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455556889999888877655544433334444444
No 125
>COG0341 SecF Preprotein translocase subunit SecF [Intracellular trafficking and secretion]
Probab=23.69 E-value=7.3e+02 Score=24.60 Aligned_cols=91 Identities=14% Similarity=0.266 Sum_probs=46.8
Q ss_pred cccccHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHH
Q 017963 163 KNKLNAAMINAVVIITAAMTIIALDSDSDRYGNITDRQYIMGFVWDILGSALHGLIFALSELVFVKLVGRRSFHVVLEQQ 242 (363)
Q Consensus 163 kek~t~~~i~svvllt~Gavll~~~~~~~~~~~~s~~~~~~G~~l~L~Aa~l~gl~l~l~q~~~kkv~~~~~~~~vle~q 242 (363)
++.+....+.+++++.+|..+-.+-... .++.+|.++++ ++=+...++= ..+..+.
T Consensus 129 g~eL~~~~~~Al~~alv~I~iYV~~RFe--------~~~a~aaI~al----~hDvii~~g~------------~slfgiE 184 (305)
T COG0341 129 GKELARQGLLALLLALVGILIYVFFRFE--------WRFALAAILAL----LHDVIITLGF------------FSLFGIE 184 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheeee--------hHHHHHHHHHH----HHHHHHHHHH------------HHHhhee
Confidence 5566667777777777776665443322 12333333333 3333222221 1112222
Q ss_pred HHHHHHHHHHHHHHHHhhcc---cccchhhhhhhcccc
Q 017963 243 VMVSLFAFAFTTIGVVVSKD---FQGMKSEAKTFKGGV 277 (363)
Q Consensus 243 ~~~~l~a~~~~~vg~~~~g~---~~~l~~e~~~f~~g~ 277 (363)
+=...+|.+..++|.-++.+ +..+.+..+.++...
T Consensus 185 ~~l~~IAAlLtiIGYSvNDtIVvfDRIREn~r~~~~~~ 222 (305)
T COG0341 185 FNLATIAALLTIIGYSVNDTIVVFDRIRENLRKYRRET 222 (305)
T ss_pred ecHHHHHHHHHHeeeccCCeEEEEhHHHHHHhhhccCC
Confidence 22667888888899988863 223444455554433
No 126
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=23.53 E-value=2.5e+02 Score=27.03 Aligned_cols=50 Identities=12% Similarity=0.020 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017963 204 GFVWDILGSALHGL-IFALSELVFVKLVGRRSFHVVLEQQVMVSLFAFAFTTIGVVVSKD 262 (363)
Q Consensus 204 G~~l~L~Aa~l~gl-~l~l~q~~~kkv~~~~~~~~vle~q~~~~l~a~~~~~vg~~~~g~ 262 (363)
|.++++.|++++|- +-++ ||.-. ..-+-.|.+++....+...+-.+..+.
T Consensus 1 G~~a~~va~~~fGs~~vPv-----K~~~~----gDg~~fQw~~~~~i~~~g~~v~~~~~~ 51 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPV-----KKFDT----GDGFFFQWVMCSGIFLVGLVVNLILGF 51 (254)
T ss_pred CchhHHHHHHHhcccceee-----EeccC----CCcHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 67888999999987 2222 44422 223556666665555555554445543
No 127
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=22.42 E-value=3.6e+02 Score=27.77 Aligned_cols=33 Identities=15% Similarity=0.306 Sum_probs=18.6
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHhhcc
Q 017963 155 TLFGYFLVKNKLNAAMINAVVIITAAMTIIALD 187 (363)
Q Consensus 155 alfs~~ilkek~t~~~i~svvllt~Gavll~~~ 187 (363)
.+.-+++-|=++..+.+..+++.++|..+++..
T Consensus 77 l~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~ 109 (402)
T PF02487_consen 77 LIAPFFIHRVPYWIRILICVALSAAGMLLVAFS 109 (402)
T ss_pred HHhHhhhhhccchHHHHHHHHHHHHHHhheeec
Confidence 334445555556666666666666666555443
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=21.80 E-value=6.2e+02 Score=23.14 Aligned_cols=27 Identities=26% Similarity=0.145 Sum_probs=16.7
Q ss_pred HHHHHHHHHhcchhhhhhhHHhHhcCC
Q 017963 48 LVLSSAAMLVAFPASSLLSRVYYANGG 74 (363)
Q Consensus 48 ~~~~~~~~~~g~~~~~Ll~r~y~~~gg 74 (363)
..+.....-+|+..++.+.....++.|
T Consensus 125 ~~~~~~~~~~g~~~~~~~~~~~~~~~~ 151 (352)
T cd06174 125 LGLFSAGFGLGALLGPLLGGLLAESLG 151 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333445555666777777777766655
No 129
>PRK02237 hypothetical protein; Provisional
Probab=21.63 E-value=1.8e+02 Score=24.55 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhccC
Q 017963 152 VFSTLFGYFLVKNKLNAAMINAVVIITAAMTIIALDS 188 (363)
Q Consensus 152 ~Ftalfs~~ilkek~t~~~i~svvllt~Gavll~~~~ 188 (363)
+.+.+..+.+-++|.+++-+.|..+..+|+.++.+.+
T Consensus 71 ~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 71 AGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3455677888999999999999999999998876655
No 130
>PRK00523 hypothetical protein; Provisional
Probab=21.51 E-value=1.1e+02 Score=24.02 Aligned_cols=28 Identities=14% Similarity=0.141 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcchhhhhhhHHhHhc
Q 017963 45 WILLVLSSAAMLVAFPASSLLSRVYYAN 72 (363)
Q Consensus 45 ~~~~~~~~~~~~~g~~~~~Ll~r~y~~~ 72 (363)
|+.+.+-++++++|-.++-.+.|.|+.+
T Consensus 5 ~l~I~l~i~~li~G~~~Gffiark~~~k 32 (72)
T PRK00523 5 GLALGLGIPLLIVGGIIGYFVSKKMFKK 32 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677788999999999999999875
No 131
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=21.27 E-value=1.5e+02 Score=21.16 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=30.1
Q ss_pred HHhhHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHhcccCC
Q 017963 314 NAIRVPI-TSIAAVILLHDPMSGFKILSLIVTFWGFGSYIYGNSST 358 (363)
Q Consensus 314 ~~~~lPv-~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y~y~~~~~ 358 (363)
.+...|+ .....=.+.+++++.....-.+.++.|++.=.|+-++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~g~~~~~~~ 53 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAAGFYNVYRL 53 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444 33444455788888888888888888888777765543
No 132
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=20.30 E-value=94 Score=26.43 Aligned_cols=38 Identities=13% Similarity=0.223 Sum_probs=19.4
Q ss_pred HHhhHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHH
Q 017963 314 NAIRVPITSIAAVILLHDPMSGFKILSLIVTFWGFGSY 351 (363)
Q Consensus 314 ~~~~lPv~~ilAvl~f~d~~~~~k~ig~~lvl~G~~~y 351 (363)
..-.+|+..++...+.+..+......+.+..+.|++.+
T Consensus 73 l~Y~lPll~li~g~~l~~~~~~~e~~~~l~~l~~l~~~ 110 (135)
T PF04246_consen 73 LVYLLPLLALIAGAVLGSYLGGSELWAILGGLLGLALG 110 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33356776644444455555444555555555555444
Done!