BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017965
(363 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0JHZ2|C3H11_ORYSJ Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa
subsp. japonica GN=Os01g0834700 PE=2 SV=2
Length = 366
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 289/370 (78%), Positives = 328/370 (88%), Gaps = 11/370 (2%)
Query: 1 MPPKQ---SKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLKQSVEPRPDPTKVAVKK 57
MPPK+ SKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSL Q+V+P+PDPTK A KK
Sbjct: 1 MPPKKAAPSKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLHQAVQPKPDPTKTAAKK 60
Query: 58 KKEEEKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQR 117
KKEEEKAREKELNDLFKVAV+QPKVPVGVDPKSI+CEFFK GQCQKGFKCKFSHDLN+QR
Sbjct: 61 KKEEEKAREKELNDLFKVAVSQPKVPVGVDPKSIVCEFFKVGQCQKGFKCKFSHDLNVQR 120
Query: 118 KGEKIDIYSDKRDGETMEDWDQETLEKVVESKKMEYNQNKPTEIVCKYFLEAVEKKQYGW 177
KGEKIDIY+DKRD ETMEDWDQETLEKVV SK EY QNKPT+IVCKYFL+AVEKKQYGW
Sbjct: 121 KGEKIDIYTDKRDAETMEDWDQETLEKVVASKGAEYQQNKPTDIVCKYFLDAVEKKQYGW 180
Query: 178 FWVCPNGGKECHYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLKSTTPMTTE 237
FWVCPNGGK+CHYRHALPPGY+LKSQMKALLEEES+++ IEDEIEDQR K+K+TTPMTT+
Sbjct: 181 FWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEESEKIAIEDEIEDQRKKVKTTTPMTTD 240
Query: 238 LFMQWKKKKMEERNAGLAAQQAERAKNDRMSGRELFLSNASLFVDDAEAFEEYHREEEAE 297
LFM+WK+KK EER AGLAA +AERAKNDRMSGRELF++++S+FVDDAEA++ Y R+EE+E
Sbjct: 241 LFMEWKRKKAEEREAGLAALRAERAKNDRMSGRELFMADSSVFVDDAEAYDVYERQEESE 300
Query: 298 SNEQ---KGKDESATSGPSNSSGAVADSEE-ILPDDDDDDELDLDELNELEASLSRTSIQ 353
+NE+ K +DE GPS+S+ + EE D + DD+LD+DELNELEASLSRTSIQ
Sbjct: 301 ANEEPSNKNQDE----GPSSSTSNGKEVEESDDEDINIDDDLDIDELNELEASLSRTSIQ 356
Query: 354 ICEPGIEASS 363
I EPG SS
Sbjct: 357 IREPGEGTSS 366
>sp|Q9SK74|C3H21_ARATH Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis
thaliana GN=At2g20280 PE=4 SV=1
Length = 371
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 293/371 (78%), Positives = 324/371 (87%), Gaps = 8/371 (2%)
Query: 1 MPPKQS-KADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLKQSVEPRPDPTKVAVKKKK 59
MPPKQ KADLAKKQK VEDKTFGLKNKNKSKNVQKYVQSLKQSV+P+PD TK A KKKK
Sbjct: 1 MPPKQQPKADLAKKQKQVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDATKAAAKKKK 60
Query: 60 EEEKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKG 119
EEEKARE+ELN+LFKVA++QPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKG
Sbjct: 61 EEEKAREQELNELFKVAISQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKG 120
Query: 120 EKIDIYSDKRDGET-MEDWDQETLEKVVESKKMEYNQNKPTEIVCKYFLEAVEKKQYGWF 178
EKIDIYSD RD + M++WDQETLEKVVESKK EYNQNKPT+IVCKYFL+AVEKKQYGWF
Sbjct: 121 EKIDIYSDTRDEDGDMDEWDQETLEKVVESKKNEYNQNKPTDIVCKYFLDAVEKKQYGWF 180
Query: 179 WVCPNGGKECHYRHALPPGYILKSQMKALLEEESD-RLPIEDEIEDQRGKLKSTTPMTTE 237
W CPNGGKECHYRHALPPGY+LKSQMKALLEEES +L +EDEIE++R KL++ T MT
Sbjct: 181 WSCPNGGKECHYRHALPPGYVLKSQMKALLEEESSKKLAVEDEIENERAKLQTATQMTPA 240
Query: 238 LFMQWKKKKMEERNAGLAAQQAERAKNDRMSGRELFLSNASLFVDDAEAFEEYHREEEAE 297
LFM+WK+KK+ ER+AGLAA QAERAKNDRMSGRELFLSNASLFVDDAEA EEY RE E E
Sbjct: 241 LFMEWKRKKIAERDAGLAASQAERAKNDRMSGRELFLSNASLFVDDAEACEEYEREREQE 300
Query: 298 SNEQKGKDESATSGPSNSSG-AVADSEEI----LPDDDDDDELDLDELNELEASLSRTSI 352
EQK K++ A +G S SSG A S+E+ DDDDDD+LD+DEL+ELEASLS+TSI
Sbjct: 301 ETEQKAKNKEAEAGTSKSSGDAEQSSKEVNEEEEDDDDDDDDLDMDELDELEASLSKTSI 360
Query: 353 QICEPGIEASS 363
QI EP E SS
Sbjct: 361 QIREPNDEGSS 371
>sp|Q54DA5|ZC3HF_DICDI Zinc finger CCCH domain-containing protein 15 homolog
OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1
Length = 373
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/304 (46%), Positives = 198/304 (65%), Gaps = 18/304 (5%)
Query: 1 MPPKQSKADLAKKQKVVEDKT---FGLKNKNKSKNVQKYVQSLKQSVEPRPDPTKVAVKK 57
MPPKQ+++ +++ + FGLKNKNKSK V YV ++ V+ K A K
Sbjct: 1 MPPKQAQSKKTVEKEKKKKVEDKTFGLKNKNKSKKVAAYVSQVEAQVKHSGLQNKEAALK 60
Query: 58 KKEE------EKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAG-QCQKGFKCKFS 110
+K + EKA+ KE + + Q KVP+GVDPKSI+CE+FK G C KG +CKF+
Sbjct: 61 EKAKRDKELAEKAK-KEAESILVNTIVQSKVPLGVDPKSIVCEYFKQGVTCPKGNRCKFA 119
Query: 111 HDLNIQRKGEKIDIYSDKR-DGETMEDWDQETLEKVVESKKMEYNQNKPTEIVCKYFLEA 169
HDL RK EKIDIY+D+R D +TME+WD+ L+ VVE K+ N+ KPT I+CK+FL+A
Sbjct: 120 HDLAAGRKSEKIDIYTDRRKDEDTMENWDEAKLKSVVEKKRTTENKAKPTAIICKFFLDA 179
Query: 170 VEKKQYGWFWVCPNGGKECHYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK 229
+E K+YGWFW CPNGG++C Y+H LP GY LK + K+ E+E + +PIE+ IE++R KL
Sbjct: 180 IESKKYGWFWECPNGGEKCAYQHCLPEGYQLKKK-KSREEDEVEEIPIEELIEEERAKLT 238
Query: 230 STTPMTTELFMQWK-KKKMEERNAGLAAQQAE----RAKNDRMSGRELFLSNASLFVDDA 284
+TP+T E F++WK +K++++ A AQ +A MSGRE+F+ N LFVDD
Sbjct: 239 KSTPVTLETFLRWKEEKRLQKEKAAKDAQDKRLADIKAGKTSMSGREMFVFNPDLFVDDE 298
Query: 285 EAFE 288
A +
Sbjct: 299 SAID 302
>sp|Q12000|TMA46_YEAST Translation machinery-associated protein 46 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TMA46 PE=1
SV=2
Length = 345
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 186/301 (61%), Gaps = 25/301 (8%)
Query: 1 MPPKQSK-ADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLKQSVEPRPDPTKVAVKKKK 59
MPPK+ K A A K+K DKTFG+KNKN+S VQKY++ ++ +P+ + ++ ++K
Sbjct: 1 MPPKKGKQAQAAGKKKDNVDKTFGMKNKNRSTKVQKYIKQVQSQSDPKKEEMRLKKLEEK 60
Query: 60 EEEKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKG 119
+ +A E E LF Q +V GVDPKS++C FK G C KG KCKFSHDLN+ R+
Sbjct: 61 KRREAEEAERRALFNPVADQ-RVRAGVDPKSMVCALFKLGNCNKGAKCKFSHDLNVGRRM 119
Query: 120 EKIDIYSDKR---DGETMEDWDQETLEKVVESKKMEYNQNKPTEIVCKYFLEAVEKKQYG 176
EK D+Y D R + +TM++WD+E L KV+ SK N T+ VCKYF+EAVE +YG
Sbjct: 120 EKKDLYQDTRSEKENDTMDNWDEEKLRKVILSK--HGNPKTTTDKVCKYFIEAVENGKYG 177
Query: 177 WFWVCPNGGKECHYRHALPPGYILKSQMKALLEEES----DRLPIEDEIEDQRGKLKST- 231
WFW+CPNGG +C YRH+LP G++LK+ + LE ES ++ +E+ IE +RGKL +
Sbjct: 178 WFWICPNGGDKCMYRHSLPEGFVLKTNEQKRLERESLEKQPKITLEEFIETERGKLDKSK 237
Query: 232 -TPMTTELFMQWKKKKMEERNAGLAAQQAER--AKNDRMSGRELFLS----NASLFVDDA 284
TP+T F QWKK + +A AE+ + + +GRE+ L N S D+A
Sbjct: 238 LTPITIANFAQWKKDHV------IAKINAEKKLSSKRKPTGREIILKMSAENKSFETDNA 291
Query: 285 E 285
+
Sbjct: 292 D 292
>sp|Q93618|ZC3HF_CAEEL Zinc finger CCCH domain-containing protein 15 homolog
OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3
Length = 374
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/373 (42%), Positives = 227/373 (60%), Gaps = 43/373 (11%)
Query: 1 MPPKQS----KADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLKQSVEPRPDPTKVAVK 56
MPPKQ K++ +K+KV+EDKTFGLKNK +K QK+V ++ V R + T++ +
Sbjct: 1 MPPKQQGPSKKSEQKRKEKVIEDKTFGLKNKKGNK-NQKFVAQVENQV--RNNNTRMDLV 57
Query: 57 KKKEEEKAREKELNDLFKVA-VTQP---KVPVGVDPKSILCEFFKAGQCQKGFKCKFSHD 112
+ ++E A++KE ++L +A + +P KV VDPKS+LC FFK G C KG KCKFSHD
Sbjct: 58 R--QQEAAKKKEKDELLDIANLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHD 115
Query: 113 LNIQRKGEKIDIYSDKR----DGETMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFL 167
L + +K K ++Y+D R D ET E+WD + L +VV K N+NK +IVCKYFL
Sbjct: 116 LAVAQKTAKKNLYADSREVEKDEETNENWDSDKLNEVVNKK----NKNKHMIDIVCKYFL 171
Query: 168 EAVEKKQYGWFWVCPNGGKECHYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGK 227
EAVE +YGWFW CPNGG++C YRH LP GY+LK + KA+ +++ D + IE+ +E +R
Sbjct: 172 EAVENNKYGWFWECPNGGEKCQYRHCLPEGYVLKKERKAMEQQKEDEISIEELVEKERAA 231
Query: 228 L--KSTTPMTTELFMQWKKKKMEERNAGLAAQQAER------AKNDRMSGRELFLSNASL 279
L K+ T +T + F+ WKKKK+ ER A E+ K++ MSGR+LFL +A+L
Sbjct: 232 LSSKNLTKLTLQTFIAWKKKKLRERKEKEEADLKEKKEKIKSGKHNGMSGRDLFLYDANL 291
Query: 280 F-VDDAEAFEEYHREEEAESNEQ-----------KGKDESATSGPSNSSGAVADSEEILP 327
DD EA + +EE + NE+ G D+ T S SS AV + + +
Sbjct: 292 VNNDDDEAGDIEMEKEEVDENEKVFEIDANFFKFDGMDDELTDQMSKSSTAVESTAKGMA 351
Query: 328 D-DDDDDELDLDE 339
D ++D D+DE
Sbjct: 352 KMDINEDLFDIDE 364
>sp|A8WMM4|ZC3HF_CAEBR Zinc finger CCCH domain-containing protein 15 homolog
OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=2
Length = 374
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 224/368 (60%), Gaps = 35/368 (9%)
Query: 1 MPPKQS---KADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLKQSVEPRPDPTKVAVKK 57
MPPKQ+ KA+ +K+KV+EDKTFGLKNK +KN QK+V ++ V R + T++ + +
Sbjct: 1 MPPKQAPSKKAENKRKEKVIEDKTFGLKNKKGNKN-QKFVAQIENQV--RNNNTRMDLVR 57
Query: 58 KKEEEKAREK-ELNDLFKVAV-TQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNI 115
++E K +EK EL D+ + + KV VDPKS+LC FFK G C KG KCKFSHDL +
Sbjct: 58 QQEAAKKKEKDELLDIQNLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAV 117
Query: 116 QRKGEKIDIYSDKRD---GETMEDWDQETLEKVVESKKMEYNQNKPTEIVCKYFLEAVEK 172
+K K ++Y+D R+ ET E+WD+E L++VV K +IVCKYFLEAVE
Sbjct: 118 AQKTAKKNLYADSREVEKDETNENWDKEKLDEVVNKKN---KGGHVIDIVCKYFLEAVEN 174
Query: 173 KQYGWFWVCPNGGKECHYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLKS-- 230
+YGWFW CPNGG +C YRH LP GY+LK KA+ ++ D + IE+ +E +R L S
Sbjct: 175 NKYGWFWECPNGGDKCQYRHCLPEGYVLKKDRKAMEAQKEDEISIEELVEKERAALNSKD 234
Query: 231 TTPMTTELFMQWKKKKMEERNAGLAA------QQAERAKNDRMSGRELFLSNASLF-VDD 283
T +T + F+ WKKKK++ER A ++ + K++ MSGR+LFL +A+L DD
Sbjct: 235 LTKLTLQTFVAWKKKKLKERKEKEEADLKAKKEKIKSGKHNGMSGRDLFLFDANLINNDD 294
Query: 284 AEAFEEYHREEEAESNEQ-----------KGKDESATSGPSNSSGAVAD-SEEILPDDDD 331
EA + +EE + NE+ G D+ T+ SNS+ AV+ + + D +
Sbjct: 295 DEAGDIEMEKEEVDENEKVFEIDANFFKFDGMDDELTNQMSNSTAAVSSVAGAVAKMDIN 354
Query: 332 DDELDLDE 339
+D D+DE
Sbjct: 355 EDLFDIDE 362
>sp|Q803J8|ZC3HF_DANRE Zinc finger CCCH domain-containing protein 15 OS=Danio rerio
GN=zc3h15 PE=2 SV=1
Length = 433
Score = 218 bits (554), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 175/273 (64%), Gaps = 16/273 (5%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVE-PRPDPTKVAVKKKKEEEKAREK-----ELNDLFK 74
TFGLKNK +K QK+++++ Q V+ + + ++A + ++ +K +K ELN+LFK
Sbjct: 28 TFGLKNKKGAKQ-QKFIKAVTQQVKFGQQNARQIAAAESEKTKKKDDKKKELSELNELFK 86
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRDGE-- 132
V KV GVDPKS+LC FFK GQC KG KCKFSHDL+++RK EK +Y D RD E
Sbjct: 87 PVVAAQKVSKGVDPKSVLCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSLYVDGRDDELL 146
Query: 133 ---TMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKEC 188
TME+WD++ LE+VV K E + K T+IVCKYFL+A+E +YGWFWVCP GG C
Sbjct: 147 EKDTMENWDEKKLEEVVNKKHGEAEKKKAKTQIVCKYFLDAIENNKYGWFWVCPGGGDNC 206
Query: 189 HYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLKS-TTPMTTELFMQWKKKKM 247
YRHALP G++LK K E+ + + +ED IE +R L + T +T E F+ WKK+K
Sbjct: 207 MYRHALPVGFVLKKDKKN-EEKNEEEISLEDLIETERSLLGANVTRITLETFLAWKKRKR 265
Query: 248 EERNAGLAAQQAERAKNDRMSGRELFLSNASLF 280
+E+ A A Q ER K D +GR L +S +F
Sbjct: 266 QEKLAK-AEQDMERKKADFKAGRALGVSGREVF 297
>sp|Q8WU90|ZC3HF_HUMAN Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens
GN=ZC3H15 PE=1 SV=1
Length = 426
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 204/347 (58%), Gaps = 34/347 (9%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVE-PRPDPTKVA-----VKKKKEEEKAREKELNDLFK 74
TFGLKNK +K QK+++++ V+ + +P +VA K KK+++K +ELN+LFK
Sbjct: 28 TFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFK 86
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRDGE-- 132
V K+ G DPKS++C FFK GQC KG KCKFSHDL ++RK EK +Y D RD E
Sbjct: 87 PVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELE 146
Query: 133 --TMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKECH 189
TM++WD++ LE+VV K E + KP T+IVCK+FLEA+E +YGWFWVCP GG C
Sbjct: 147 KDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICM 206
Query: 190 YRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-STTPMTTELFMQWKKKKME 248
YRHALPPG++LK K EE+ D + +ED IE +R L + T +T E F+ WKK+K +
Sbjct: 207 YRHALPPGFVLKKDKKK--EEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQ 264
Query: 249 ERNAGLAAQQAERAKNDRMSGRELFLSNASLFVDDAEAFEEYHREEEAESNEQKGKDESA 308
E+ L Q ER K D +G+ L +S +F E+ R E ++++ D
Sbjct: 265 EKIDKL-EQDMERRKADFKAGKALVISGREVF--------EF-RPELVNDDDEEADDTRY 314
Query: 309 TSGPSNSSGAVADSEEILPDDDDDDEL----DLDELNELEASLSRTS 351
T G V DS + +D D L D+DE ASL R S
Sbjct: 315 TQGTGGDE--VDDSVSV---NDIDLSLYIPRDVDETGITVASLERFS 356
>sp|Q6U6G5|ZC3HF_RAT Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus
GN=Zc3h15 PE=2 SV=1
Length = 426
Score = 216 bits (549), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 176/272 (64%), Gaps = 16/272 (5%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVE-PRPDPTKVA-----VKKKKEEEKAREKELNDLFK 74
TFGLKNK +K QK+++++ V+ + +P +VA K KK+++K +ELN+LFK
Sbjct: 28 TFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFK 86
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRDGE-- 132
V K+ G DPKS++C FFK GQC KG KCKFSHDL ++RK EK +Y D RD E
Sbjct: 87 PVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELE 146
Query: 133 --TMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKECH 189
TM++WD++ LE+VV K E + KP T+IVC++FLEA+E +YGWFWVCP GG C
Sbjct: 147 KDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCM 206
Query: 190 YRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-STTPMTTELFMQWKKKKME 248
YRHALPPG++LK K EE+ D + +ED IE +R L + T +T E F+ WKK+K +
Sbjct: 207 YRHALPPGFVLKKDKKK--EEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQ 264
Query: 249 ERNAGLAAQQAERAKNDRMSGRELFLSNASLF 280
E+ L Q ER K D +G+ L +S +F
Sbjct: 265 EKIDKL-EQDMERRKADFKAGKALVISGREVF 295
>sp|Q3TIV5|ZC3HF_MOUSE Zinc finger CCCH domain-containing protein 15 OS=Mus musculus
GN=Zc3h15 PE=1 SV=2
Length = 426
Score = 216 bits (549), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 176/272 (64%), Gaps = 16/272 (5%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVE-PRPDPTKVA-----VKKKKEEEKAREKELNDLFK 74
TFGLKNK +K QK+++++ V+ + +P +VA K KK+++K +ELN+LFK
Sbjct: 28 TFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFK 86
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRDGE-- 132
V K+ G DPKS++C FFK GQC KG KCKFSHDL ++RK EK +Y D RD E
Sbjct: 87 PVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELE 146
Query: 133 --TMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKECH 189
TM++WD++ LE+VV K E + KP T+IVC++FLEA+E +YGWFWVCP GG C
Sbjct: 147 KDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCM 206
Query: 190 YRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-STTPMTTELFMQWKKKKME 248
YRHALPPG++LK K EE+ D + +ED IE +R L + T +T E F+ WKK+K +
Sbjct: 207 YRHALPPGFVLKKDKKK--EEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQ 264
Query: 249 ERNAGLAAQQAERAKNDRMSGRELFLSNASLF 280
E+ L Q ER K D +G+ L +S +F
Sbjct: 265 EKIDKL-EQDMERRKADFKAGKALVISGREVF 295
>sp|Q1RMM1|ZC3HF_BOVIN Zinc finger CCCH domain-containing protein 15 OS=Bos taurus
GN=ZC3H15 PE=2 SV=1
Length = 426
Score = 215 bits (548), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/272 (47%), Positives = 176/272 (64%), Gaps = 16/272 (5%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVE-PRPDPTKVA-----VKKKKEEEKAREKELNDLFK 74
TFGLKNK +K QK+++++ V+ + +P +VA K KK+++K +ELN+LFK
Sbjct: 28 TFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFK 86
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRDGE-- 132
V K+ G DPKS++C FFK GQC KG KCKFSHDL ++RK EK +Y D RD E
Sbjct: 87 PVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELE 146
Query: 133 --TMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKECH 189
TM++WD++ LE+VV K E + KP T+IVCK+FLEA+E +YGWFWVCP GG C
Sbjct: 147 KDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICM 206
Query: 190 YRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-STTPMTTELFMQWKKKKME 248
YRHALPPG++LK K EE+ D + +ED IE +R L + T +T E F+ WKK+K +
Sbjct: 207 YRHALPPGFVLKKDKKK--EEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQ 264
Query: 249 ERNAGLAAQQAERAKNDRMSGRELFLSNASLF 280
E+ L Q ER K D +G+ L +S +F
Sbjct: 265 EKIDKL-EQDIERRKADFKAGKALVISGREVF 295
>sp|Q6DD06|ZC3HF_XENLA Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis
GN=zc3h15 PE=2 SV=1
Length = 426
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 127/272 (46%), Positives = 175/272 (64%), Gaps = 16/272 (5%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVEP-RPDPTKVA-----VKKKKEEEKAREKELNDLFK 74
TFGLKNK +K QK+++++ V+ + +P VA K KK+++ +ELNDLFK
Sbjct: 29 TFGLKNKKGAKQ-QKFIKNVTHQVKSGQQNPRLVAQAEGDKKNKKDDKMKELQELNDLFK 87
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRDGE-- 132
V KV G DPKS++C FFK GQC KG KCKFSHDL+++RK EK +Y D RD E
Sbjct: 88 PVVVAQKVSKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDDELE 147
Query: 133 --TMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKECH 189
TME+WD++ LE+VV K E + K T+IVCK+FLEA+E +YGWFWVCP GG C
Sbjct: 148 KDTMENWDEKKLEEVVNKKHGEAEKIKAKTQIVCKFFLEAIENNKYGWFWVCPGGGDTCM 207
Query: 190 YRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-STTPMTTELFMQWKKKKME 248
YRHALPPG++LK + E++ + + +ED IE +R L + T +T E F+QWKK+K
Sbjct: 208 YRHALPPGFVLKKEKVK--EDKDEDISLEDLIEKERAALGPNVTRITLESFLQWKKRKRA 265
Query: 249 ERNAGLAAQQAERAKNDRMSGRELFLSNASLF 280
+R L ++ E+ K D SG+ L +S +F
Sbjct: 266 DRILKL-EEEMEKRKEDFKSGKSLGVSGREVF 296
>sp|Q28Y69|ZC3HF_DROPS Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1
Length = 406
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 207/359 (57%), Gaps = 43/359 (11%)
Query: 1 MPPKQSKADLAKKQK------VVEDKTFGLKNKNKS------KNVQKYVQSLKQSVEPRP 48
MPPK++ A +KK + V+EDKTFGLKNK + + VQK VQ+ PR
Sbjct: 1 MPPKKAPAGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQQKFIQQVQKQVQAGGH--HPRQ 58
Query: 49 DPTKVAVKKKKEEEKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCK 108
D K +K+K+ RE + +FK TQ KV G DPKS++C FFK G C KG KCK
Sbjct: 59 DGDKKKDEKEKKLADLRE--MASIFKPVQTQ-KVDKGTDPKSVVCAFFKQGLCTKGDKCK 115
Query: 109 FSHDLNIQRKGEKIDIYSDKRDGE--TMEDWDQETLEKVVESKKMEYNQNKPTEIVCKYF 166
FSHDL+++ K EK +Y D RD E M +WD L++VV+ K E + TEI+CK+F
Sbjct: 116 FSHDLSLENKVEKRSMYVDMRDNEDDLMTNWDDAKLKEVVDKKHSEEKRRPTTEIICKFF 175
Query: 167 LEAVEKKQYGWFWVCPNGGKECHYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRG 226
LEAVEK +YGWFW CPNG K C YRHALPPGY+LK K E++ + + D IE +R
Sbjct: 176 LEAVEKSKYGWFWECPNGEK-CIYRHALPPGYVLKRDKKK--EDKPTEISLVDLIEKERA 232
Query: 227 KLKST-TPMTTELFMQWKKKKMEERNAGLAAQQAERAKND-------RMSGRELFLSNAS 278
L S T +T E F+ WKK+K++E+ A + A++ ER K+D +SGRE+F N
Sbjct: 233 ALGSNQTRVTLETFLAWKKRKLQEKKAKMVAEE-ERKKSDFSKGKQFGISGREMFSFNPD 291
Query: 279 LFVDDA------EAFEEYHREEEAESN-----EQKGKDESATSGPSNSSGAVADSEEIL 326
L VDD AF+ Y RE++ + N E S + + SG +A S +L
Sbjct: 292 L-VDDGPIEEGDAAFDVYKREDDDDDNAFEFKELDLAALSLAAKEVDGSGTIASSTRLL 349
>sp|Q7JWR9|ZC3HF_DROME Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila
melanogaster GN=CG8635 PE=1 SV=1
Length = 404
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 208/357 (58%), Gaps = 41/357 (11%)
Query: 1 MPPKQS------KADLAKKQKVVEDKTFGLKNKNKS------KNVQKYVQSLKQSVEPRP 48
MPPK++ K + KK+KV+EDKTFGLKNK + + VQK VQS Q PR
Sbjct: 1 MPPKKAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQQKFIQQVQKQVQSGGQ--HPRQ 58
Query: 49 DPTKVAVKKKKEEEKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCK 108
D K +K+K+ + RE L +FK TQ KV G DPKS++C FFK G C KG KCK
Sbjct: 59 DGDKRKEEKEKKLAEQREMAL--IFKPVQTQ-KVEKGTDPKSVVCAFFKQGTCTKGDKCK 115
Query: 109 FSHDLNIQRKGEKIDIYSDKRD-GETMEDWDQETLEKVVESKKMEYNQNKPTEIVCKYFL 167
FSHDL+ + K EK IY D RD + M +WD L++VVE K Q T+I+CK+FL
Sbjct: 116 FSHDLSQENKVEKRSIYVDMRDEDDPMTNWDDAKLKEVVEKKSSGEKQRPTTDIICKFFL 175
Query: 168 EAVEKKQYGWFWVCPNGGKECHYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGK 227
EAVEK +YGWFW CPNGGK C YRHALP GY+LK K EE+ + + D IE +R
Sbjct: 176 EAVEKSKYGWFWECPNGGK-CIYRHALPAGYVLKRDKKK--EEKPTEISLVDLIEKERAA 232
Query: 228 LK-STTPMTTELFMQWKKKKMEERNAGLAAQQAERAKND-------RMSGRELFLSNASL 279
L + T +T E F+ WKK+K+ E+ A LAA++ ER K+D +SGRE+F N L
Sbjct: 233 LGPNQTRVTLESFLAWKKRKIAEKKAKLAAEE-ERKKSDFSKGKQFGISGREMFSFNPDL 291
Query: 280 FVDDA------EAFEEYHREEE----AESNEQKGKDESATSGPSNSSGAVADSEEIL 326
VDD AF+ Y+RE++ E E S + + SG +A + +L
Sbjct: 292 -VDDGPMEEGDAAFDVYNREDDDDNAVEFKELDLAALSLAAKEVDGSGTIASTNRLL 347
>sp|Q5H7N8|ZC3HF_CHICK Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus
GN=ZC3H15 PE=1 SV=1
Length = 429
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 174/272 (63%), Gaps = 16/272 (5%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVE-----PRPDP-TKVAVKKKKEEEKAREKELNDLFK 74
TFGLKNK +K QK+ +++ V+ PR T+ K KKE++K +ELN+LFK
Sbjct: 29 TFGLKNKKGAKQ-QKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFK 87
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRD---- 130
V K+ G DPKS++C FFK GQC KG KCKFSHDL+++RK EK +Y D RD
Sbjct: 88 PVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYIDARDEDLE 147
Query: 131 GETMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKECH 189
+TM++WD++ LE+VV K E + KP T+IVCKYFL+A+E +YGWFWVCP GG C
Sbjct: 148 KDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCM 207
Query: 190 YRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-STTPMTTELFMQWKKKKME 248
YRHALPPG++LK K EE+ D + +ED IE +R L + T +T E F+ WK++K +
Sbjct: 208 YRHALPPGFVLKKDKKK--EEKQDEISLEDLIEKERAALGPNVTKITLECFIAWKRRKRQ 265
Query: 249 ERNAGLAAQQAERAKNDRMSGRELFLSNASLF 280
E+ A Q ER K D +G+ L +S +F
Sbjct: 266 EK-IDKAEQDMERRKADFKAGKALVISGREVF 296
>sp|A4IGY3|ZC3HF_XENTR Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis
GN=zc3h15 PE=2 SV=1
Length = 426
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 177/272 (65%), Gaps = 16/272 (5%)
Query: 21 TFGLKNKNKSKNVQKYVQSLKQSVE-PRPDPTKVA-----VKKKKEEEKAREKELNDLFK 74
TFGLKNK +K QK+++++ V+ + +P VA K KK+++K ELNDLFK
Sbjct: 29 TFGLKNKKGAKQ-QKFIKNVIHQVKFGQQNPRLVAQAEGEKKTKKDDKKKELLELNDLFK 87
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDKRDGE-- 132
V KV G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD E
Sbjct: 88 PVVAAQKVSKGADPKSVVCAFYKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDEELE 147
Query: 133 --TMEDWDQETLEKVVESKKMEYNQNKP-TEIVCKYFLEAVEKKQYGWFWVCPNGGKECH 189
TME+WD++ LE+VV K E + KP T+IVCK+FLEA+E +YGWFWVCP GG C
Sbjct: 148 KDTMENWDEKKLEEVVNKKHGEAEKIKPKTQIVCKFFLEAIENNKYGWFWVCPGGGDMCM 207
Query: 190 YRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-STTPMTTELFMQWKKKKME 248
YRHALPPG++LK K EE+ + + +ED IE +R L + T +T E F++WKK+K +
Sbjct: 208 YRHALPPGFVLKKDKKK--EEKDEEISLEDLIERERAGLGLNVTRITLESFLEWKKRKRQ 265
Query: 249 ERNAGLAAQQAERAKNDRMSGRELFLSNASLF 280
+R L ++ E+ K D +G+ L +S +F
Sbjct: 266 DRIVKL-EEEMEKRKADFKAGKSLGISGREVF 296
>sp|Q9USV4|MEP33_SCHPO mRNA export protein 33 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mep33 PE=2 SV=1
Length = 292
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 146/323 (45%), Gaps = 75/323 (23%)
Query: 2 PPKQSKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLKQSVEP-------RPDPTKVA 54
P K +K D KK D TFGLKNKN+S VQ ++ ++Q+ R + +
Sbjct: 13 PGKAAKKDPTKK---AADATFGLKNKNRSTKVQAKIRQIEQNAAASGSKDAKRQEALRKR 69
Query: 55 VKKKKEEEKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLN 114
+++K +A + E+ LF +P P++ L + + QK
Sbjct: 70 REEEKRAAEAAKAEVAALFNA------IPKKQTPQNFLTRKEEVKESQK----------- 112
Query: 115 IQRKGEKIDIYSDKRDGETMEDWDQETLEKVVESKKMEYNQNKP---TEIVCKYFLEAVE 171
ID+YSD RD +T LEK +P T+IVCK+FLEA E
Sbjct: 113 -------IDLYSDVRDQQT-----DLPLEK------------RPWINTDIVCKFFLEACE 148
Query: 172 KKQYGWFWVCPNGGKECHYRHALPPGYILKSQMKALLEEESDRLPIEDEIEDQRGKLK-S 230
+YGW W CPNG C Y+HALP GY+L K ++ + + +E IE +R +L +
Sbjct: 149 TGKYGWLWQCPNGNMTCIYKHALPYGYVLSRDKKK--DDTKEEISLEAFIEIERHRLGPN 206
Query: 231 TTPMTTELFMQWKK-------KKMEERNAGLAAQQAERAKNDRMSGRELFLSN---ASLF 280
TP+T E F +W K+ EER + A ++ +SGRE F SN
Sbjct: 207 LTPVTEENFKKWSDGRRDRILKQAEERRSNRAVGRSN------LSGREYFESNKDKTHEV 260
Query: 281 VDDAE--AFEEYHREEEAESNEQ 301
V D E F RE EA + Q
Sbjct: 261 VGDEEDWDFSALRRETEALAKAQ 283
>sp|Q6GLT5|MKRN1_XENLA Probable E3 ubiquitin-protein ligase makorin-1 OS=Xenopus laevis
GN=mkrn1 PE=2 SV=1
Length = 408
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 83 PVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQR 117
PVGV + + C +F G C++G C++SHDL R
Sbjct: 30 PVGVWTRHVTCRYFIHGVCKEGINCRYSHDLATSR 64
>sp|Q60764|MKRN3_MOUSE Probable E3 ubiquitin-protein ligase makorin-3 OS=Mus musculus
GN=Mkrn3 PE=2 SV=2
Length = 544
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 89 KSILCEFFKAGQCQKGFKCKFSHDLNIQRK 118
K ILC ++ GQC++G C++SHDL+ +R+
Sbjct: 94 KQILCRYYLHGQCKEGDNCRYSHDLSGRRR 123
>sp|Q6ZPZ3|ZC3H4_MOUSE Zinc finger CCCH domain-containing protein 4 OS=Mus musculus
GN=Zc3h4 PE=1 SV=2
Length = 1304
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 91 ILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIY 125
++C++F G+C G C FSHD+ + +K E Y
Sbjct: 393 VICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFY 427
>sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens
GN=ZC3H4 PE=1 SV=3
Length = 1303
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 91 ILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIY 125
++C++F G+C G C FSHD+ + +K E Y
Sbjct: 394 VICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFY 428
>sp|Q13064|MKRN3_HUMAN Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens
GN=MKRN3 PE=1 SV=1
Length = 507
Score = 38.5 bits (88), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 85 GVDPKSILCEFFKAGQCQKGFKCKFSHDLN 114
G+ K I+C ++ GQC++G C++SHDL+
Sbjct: 93 GIWTKQIICRYYIHGQCKEGENCRYSHDLS 122
>sp|Q8BYK8|ZC3H6_MOUSE Zinc finger CCCH domain-containing protein 6 OS=Mus musculus
GN=Zc3h6 PE=2 SV=2
Length = 1177
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 92 LCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIY 125
+C++F G+C KG CKF+HD +++K E Y
Sbjct: 275 ICKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYY 308
>sp|Q5ZA07|C3H41_ORYSJ E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica
GN=MKRN PE=2 SV=1
Length = 368
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 89 KSILCEFFKAGQCQKGFKCKFSHDLNIQ 116
K +LC+FF G C KG C+FSHD N Q
Sbjct: 4 KRVLCKFFMHGACLKGEYCEFSHDWNDQ 31
>sp|Q657B3|C3H7_ORYSJ Zinc finger CCCH domain-containing protein 7 OS=Oryza sativa subsp.
japonica GN=Os01g0572100 PE=2 SV=1
Length = 698
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 83 PVGVDPKSI-LCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYS 126
PV + PK + +C F+ G+CQ+G CKFSHD K + Y+
Sbjct: 425 PV-IKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYA 468
>sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens
GN=ZC3H6 PE=2 SV=2
Length = 1189
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 92 LCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIY 125
+C++F G+C KG +CKF HD ++++ E Y
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFY 310
>sp|Q9LTS7|C3H65_ARATH Zinc finger CCCH domain-containing protein 65 OS=Arabidopsis
thaliana GN=EMB1789 PE=2 SV=1
Length = 675
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 83 PVGVDPKSI-LCEFFKAGQCQKGFKCKFSHD 112
PV PK I C + G+C +G KCKFSHD
Sbjct: 345 PVAPKPKPIKYCRHYLKGRCHEGDKCKFSHD 375
>sp|B0F0H3|MKRN2_XENLA Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus laevis
GN=mkrn2 PE=2 SV=2
Length = 409
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 86 VDPKSILCEFFKAGQCQKGFKCKFSHDL 113
+ PK + C +F G C++G +C FSHDL
Sbjct: 1 MSPKQVTCRYFLHGVCREGSRCLFSHDL 28
>sp|E0X9N4|C3H69_ARATH Zinc finger CCCH domain-containing protein 69 OS=Arabidopsis
thaliana GN=At3g63550 PE=3 SV=1
Length = 350
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 89 KSILCEFFKAGQCQKGFKCKFSHD 112
K ILC+FF G C KG C+FSHD
Sbjct: 3 KRILCKFFAHGACLKGEHCEFSHD 26
>sp|Q9DD48|MKRN2_SERQU Probable E3 ubiquitin-protein ligase makorin-2 OS=Seriola
quinqueradiata GN=mkrn2 PE=2 SV=1
Length = 423
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 89 KSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIY 125
K + C +F G C++G +C FSHDLN + Y
Sbjct: 4 KQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFY 40
>sp|Q6C007|CWC2_YARLI Pre-mRNA-splicing factor CWC2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CWC2 PE=3 SV=1
Length = 382
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 59 KEEEKAREKELNDLFKVAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNI 115
KE+EK +K+ + +A P S C +F G C +G KC+F H L +
Sbjct: 95 KEDEKFNQKKADGRCSIARDSGYTRADKVPGSYFCLYFARGLCTQGHKCEFLHRLPV 151
>sp|Q4WKD9|YTH1_ASPFU mRNA 3'-end-processing protein yth1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yth1
PE=3 SV=1
Length = 254
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 90 SILCEFFKAGQCQKGFKCKFSHDLNIQRKGE 120
S++C+ F G C+KG KC++ H+ N++R E
Sbjct: 89 SLVCKHFLKGLCKKGLKCEYLHEYNLRRMPE 119
>sp|Q5BGN2|YTH1_EMENI mRNA 3'-end-processing protein yth1 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=yth1 PE=3 SV=1
Length = 254
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 90 SILCEFFKAGQCQKGFKCKFSHDLNIQRKGE 120
S++C+ F G C+KG KC++ H+ N++R E
Sbjct: 89 SLVCKHFLKGLCKKGMKCEYLHEYNLRRMPE 119
>sp|Q2URI6|YTH1_ASPOR mRNA 3'-end-processing protein yth1 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=yth1 PE=3 SV=1
Length = 255
Score = 35.0 bits (79), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 90 SILCEFFKAGQCQKGFKCKFSHDLNIQRKGE 120
S++C+ F G C+KG KC++ H+ N++R E
Sbjct: 89 SLVCKHFLKGLCKKGLKCEYLHEYNLRRMPE 119
>sp|Q8N5P1|ZC3H8_HUMAN Zinc finger CCCH domain-containing protein 8 OS=Homo sapiens
GN=ZC3H8 PE=1 SV=2
Length = 291
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 92 LCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIY 125
+C++F +C KG +CKF HD I++K E Y
Sbjct: 196 ICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFY 229
>sp|Q9JJ48|ZC3H8_MOUSE Zinc finger CCCH domain-containing protein 8 OS=Mus musculus
GN=Zc3h8 PE=1 SV=2
Length = 305
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 92 LCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIY 125
+C++F +C KG +CKF HD I++K E Y
Sbjct: 210 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYY 243
>sp|Q09228|EGL27_CAEEL Egg-laying defective protein 27 OS=Caenorhabditis elegans GN=egl-27
PE=2 SV=2
Length = 1129
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 85 GVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGE 120
GVDP +IL + AGQ +G F H + +Q++ E
Sbjct: 846 GVDPTAILMQQMMAGQQSQGVNAAFQHQMALQQQLE 881
>sp|O94721|YCF9_SCHPO RWD domain-containing protein C1393.09c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=4
SV=1
Length = 215
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 17/80 (21%)
Query: 223 DQRGKLKSTTPMTTELFMQWKKKKMEERNAGLAAQQAERAKND----------------R 266
+Q K TP+T E F +WKK RN L +Q + K R
Sbjct: 135 EQENKKFHGTPVTVESFTEWKKGFDAWRNEQLKLEQESKLKEALSAASSSNARKAILEKR 194
Query: 267 MSGRELFLSNASLFVDDAEA 286
M+GRELF +N + +DD E
Sbjct: 195 MTGRELFENNL-VKLDDVEG 213
>sp|P0CR50|SLT11_CRYNJ Pre-mRNA-splicing factor SLT11 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SLT11 PE=3 SV=1
Length = 326
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 17 VEDKTFGLKNKNKSKNVQK--YVQSLKQSVEPRPDPTKVAVKKKKEEEKAREKELNDLFK 74
V D K + S ++ K Y+Q+L+ + PD +A + RE L
Sbjct: 92 VRDAALARKAQAPSSDINKQYYIQNLEAQMAESPD--GLAYDSEVANRAGREM----LKN 145
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDL 113
+A T P + +C FF G+C++G +C F H++
Sbjct: 146 LARTDPYYKRN---RPHICSFFVKGECKRGAECPFRHEM 181
>sp|P0CR51|SLT11_CRYNB Pre-mRNA-splicing factor SLT11 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SLT11 PE=3
SV=1
Length = 326
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 17 VEDKTFGLKNKNKSKNVQK--YVQSLKQSVEPRPDPTKVAVKKKKEEEKAREKELNDLFK 74
V D K + S ++ K Y+Q+L+ + PD +A + RE L
Sbjct: 92 VRDAALARKAQAPSSDINKQYYIQNLEAQMAESPD--GLAYDSEVANRAGREM----LKN 145
Query: 75 VAVTQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDL 113
+A T P + +C FF G+C++G +C F H++
Sbjct: 146 LARTDPYYKRN---RPHICSFFVKGECKRGAECPFRHEM 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.128 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,995,818
Number of Sequences: 539616
Number of extensions: 6335768
Number of successful extensions: 42251
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 582
Number of HSP's that attempted gapping in prelim test: 37797
Number of HSP's gapped (non-prelim): 3871
length of query: 363
length of database: 191,569,459
effective HSP length: 119
effective length of query: 244
effective length of database: 127,355,155
effective search space: 31074657820
effective search space used: 31074657820
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)