BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017966
(363 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp.
japonica GN=ACLA-2 PE=2 SV=2
Length = 423
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/363 (91%), Positives = 347/363 (95%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
MLFGKRGKSGLVALNLD+AQV EFVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 61 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 120
IVS+RLG TISFSECGGIEIEENWDKVKTIFLPTEK MT DACAPLIATLPLE RGKIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPMTPDACAPLIATLPLEARGKIGD 180
Query: 121 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 180
FI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NIEFPLPFG
Sbjct: 181 FIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFG 240
Query: 181 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 240
RVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 241 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 300
YAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDV TF+GIIRALRE
Sbjct: 301 YAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALRE 360
Query: 301 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 360
KESKLKAARMHI+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAI+C+M
Sbjct: 361 KESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECVM 420
Query: 361 SAS 363
+A+
Sbjct: 421 AAA 423
>sp|O80526|ACLA3_ARATH ATP-citrate synthase alpha chain protein 3 OS=Arabidopsis thaliana
GN=ACLA-3 PE=2 SV=1
Length = 424
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/360 (91%), Positives = 345/360 (95%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
MLFGKRGKSGLVAL LDLA+VA+FVK RLGTEVEM GCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALKLDLAEVADFVKARLGTEVEMEGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 61 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 120
IVSDRLGCTISFSECGGIEIEENWDKVKTIFLP EK MTL+ CAPLIATLPLE R KIG+
Sbjct: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPAEKSMTLEVCAPLIATLPLEVRAKIGN 180
Query: 121 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 180
FIMG FAVFQDLDFSF+EMNPFTLV+GEP+PLDMRGELDDTAAFKNF KW +IEFPLPFG
Sbjct: 181 FIMGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDMRGELDDTAAFKNFNKWGDIEFPLPFG 240
Query: 181 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 240
RVLSSTE+FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 241 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 300
YAEYSGAPNEEEVLQYARVVIDCAT DPDGRKRALLIGGGIANFTDVA TFNGIIRALRE
Sbjct: 301 YAEYSGAPNEEEVLQYARVVIDCATTDPDGRKRALLIGGGIANFTDVAATFNGIIRALRE 360
Query: 301 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 360
KE++LKA+RMHI+VRRGGPNYQTGLA+MRALGEELG+PLEVYGPEATMTGICK+AIDCIM
Sbjct: 361 KETRLKASRMHIYVRRGGPNYQTGLARMRALGEELGVPLEVYGPEATMTGICKRAIDCIM 420
>sp|Q2QNG7|ACLA3_ORYSJ ATP-citrate synthase alpha chain protein 3 OS=Oryza sativa subsp.
japonica GN=ACLA-3 PE=2 SV=1
Length = 423
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/363 (90%), Positives = 346/363 (95%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
MLFGKRGKSGLVALNLDLAQV +FVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDLAQVRQFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 61 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 120
IVS+RLG TISFSECGGIEIEENWDKVKT+FLPTEK MT DACAPLIATLPLE R KIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKAMTPDACAPLIATLPLEVRTKIGD 180
Query: 121 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 180
FI GV++VFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NI+FPLPFG
Sbjct: 181 FIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFG 240
Query: 181 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 240
RVLS +ESFIH LDEKTS+SLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 241 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 300
YAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDVA TF+GIIRALRE
Sbjct: 301 YAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALRE 360
Query: 301 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 360
KESKLKAARM+I+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAIDCIM
Sbjct: 361 KESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVYGPEATMTGICKQAIDCIM 420
Query: 361 SAS 363
+ +
Sbjct: 421 AEA 423
>sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2 OS=Arabidopsis thaliana
GN=ACLA-2 PE=2 SV=1
Length = 423
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/363 (82%), Positives = 337/363 (92%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
MLFGKRGKSGLVALNLD A VA FVK RLG EVEM GCKGPITTFIVEPFVPHN+E+YL+
Sbjct: 61 MLFGKRGKSGLVALNLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPFVPHNEEFYLN 120
Query: 61 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 120
IVSDRLGC+ISFSECGGI+IEENWDKVKTI +PT +T + CAPL+ATLPLE +G++ D
Sbjct: 121 IVSDRLGCSISFSECGGIDIEENWDKVKTITIPTGASLTFEICAPLVATLPLEIKGELED 180
Query: 121 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 180
FI +F +F+DLDF+F+EMNPFTLV+G+PYPLDMRGELDDTAAFKNFKKW +IEFP+PFG
Sbjct: 181 FIQVIFTLFEDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPMPFG 240
Query: 181 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 240
RV+SSTESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 241 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 300
YAEYSGAP E+EVLQYARVVIDCATA+PDG+ RAL+IGGGIANFTDVA TFNGIIRAL+E
Sbjct: 301 YAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKE 360
Query: 301 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 360
KE+KLKAARMHIFVRRGGPNYQ GLAKMR+LG+E+G+P+EVYGPEATMTGICK+AI I
Sbjct: 361 KEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEIGVPIEVYGPEATMTGICKEAIQYIT 420
Query: 361 SAS 363
+A+
Sbjct: 421 AAA 423
>sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1 OS=Arabidopsis thaliana
GN=ACLA-1 PE=1 SV=1
Length = 423
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/363 (83%), Positives = 334/363 (92%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
MLFGKRGKSGLVAL LD A VA FVK RLG EVEM GCKGPITTFIVEPFVPHN+EYYL+
Sbjct: 61 MLFGKRGKSGLVALKLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPFVPHNEEYYLN 120
Query: 61 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 120
+VSDRLGC+ISFSECGGIEIEENWDKVKTIFLPT +T + CAPL+ATLPLE + +I +
Sbjct: 121 VVSDRLGCSISFSECGGIEIEENWDKVKTIFLPTGASLTPEICAPLVATLPLEIKAEIEE 180
Query: 121 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 180
FI +F +FQDLDF+F+EMNPFTLV+G PYPLDMRGELDDTAAFKNFKKW +IEFPLPFG
Sbjct: 181 FIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFG 240
Query: 181 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 240
RV+S TESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 241 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 300
YAEYSGAP E+EVLQYARVVIDCATA+PDG+ RAL+IGGGIANFTDVA TFNGIIRAL+E
Sbjct: 301 YAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKE 360
Query: 301 KESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 360
KE+KLKAARMHIFVRRGGPNYQ GLAKMRALG+++G+P+EVYGPEATMTGICK+AI I
Sbjct: 361 KEAKLKAARMHIFVRRGGPNYQKGLAKMRALGDDIGVPIEVYGPEATMTGICKEAIQYIT 420
Query: 361 SAS 363
+A+
Sbjct: 421 AAA 423
>sp|Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa
subsp. japonica GN=ACLA-1 PE=3 SV=2
Length = 407
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/364 (85%), Positives = 326/364 (89%), Gaps = 18/364 (4%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
MLFGKRGKSGLVALNLD+AQV EFVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 61 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 120
IVS+RLG TISFSECGGIEIEENWDKVKTIFL TEK MT DACAPLIATLPLE RGKIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTIFLSTEKPMTPDACAPLIATLPLEARGKIGD 180
Query: 121 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFK-KWANIEFPLPF 179
FI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFK + KW NIEFPLPF
Sbjct: 181 FIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKTSRSKWGNIEFPLPF 240
Query: 180 GRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELG 239
GRVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGG EL
Sbjct: 241 GRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGG-----------------ELE 283
Query: 240 NYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALR 299
NYAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDV TF+GIIRALR
Sbjct: 284 NYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALR 343
Query: 300 EKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCI 359
EKESKLKAARMHI+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAI+C+
Sbjct: 344 EKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECV 403
Query: 360 MSAS 363
M+A+
Sbjct: 404 MAAA 407
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 311 bits (796), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 226/358 (63%), Gaps = 3/358 (0%)
Query: 2 LFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYL 59
L +RGK GLV +NL L V ++K RLG E +G KG + F++EPFVPH+Q E+Y+
Sbjct: 62 LIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFYV 121
Query: 60 SIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT-EKHMTLDACAPLIATLPLEFRGKI 118
I + R G + F GG+++ + K + + + EK T D L+ P + + +
Sbjct: 122 CIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNTEDIKRHLLVHAPEDKKEVL 181
Query: 119 GDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 178
FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP P
Sbjct: 182 ASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPP 241
Query: 179 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 238
FGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL
Sbjct: 242 FGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNEL 301
Query: 239 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRAL 298
NY EYSGAP+E++ YA+ ++ T + + L+IGG IANFT+VA TF GI+RA+
Sbjct: 302 ANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAI 361
Query: 299 REKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 356
R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 362 RDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 228/359 (63%), Gaps = 7/359 (1%)
Query: 2 LFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYL 59
L +RGK GLV +NL L V ++K RLG E +G KG + F++EPFVPH+Q E+Y+
Sbjct: 62 LIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFYV 121
Query: 60 SIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGKI 118
I + R G + F GG+++ + K + + + ++ + D L+ P + + +
Sbjct: 122 CIYATREGDYVLFHHEGGVDVGDVDTKAQKLLVGVDEKLNAEDIKRHLLVHAPEDKKEIL 181
Query: 119 GDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 178
FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP P
Sbjct: 182 ASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPP 241
Query: 179 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 238
FGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL
Sbjct: 242 FGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNEL 301
Query: 239 GNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIR 296
NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+R
Sbjct: 302 ANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVR 359
Query: 297 ALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQA 355
A+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A
Sbjct: 360 AIRDYQGSLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/360 (44%), Positives = 227/360 (63%), Gaps = 7/360 (1%)
Query: 2 LFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQE--YYL 59
L +RGK GLV +NL L V ++K RLG E +G G + F++EPFVPH QE +Y+
Sbjct: 62 LIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFYV 121
Query: 60 SIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGKI 118
I + R G + F GG+++ + K + + + ++ + D L+ P + + +
Sbjct: 122 CIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVAVDEKLNPEDIKKHLLVHAPEDKKEIL 181
Query: 119 GDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 178
FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP P
Sbjct: 182 ASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPP 241
Query: 179 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 238
FGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL
Sbjct: 242 FGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNEL 301
Query: 239 GNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIR 296
NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+R
Sbjct: 302 ANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVR 359
Query: 297 ALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 356
A+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 360 AIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/360 (44%), Positives = 228/360 (63%), Gaps = 7/360 (1%)
Query: 2 LFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYL 59
L +RGK GLV +NL L V ++K RLG E +G G + F++EPFVPH+Q E+Y+
Sbjct: 62 LIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYV 121
Query: 60 SIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGKI 118
I + R G + F GG+++ + K + + + ++ + D L+ P + + +
Sbjct: 122 CIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEIL 181
Query: 119 GDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 178
FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP P
Sbjct: 182 ASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPP 241
Query: 179 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 238
FGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL
Sbjct: 242 FGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNEL 301
Query: 239 GNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIR 296
NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+R
Sbjct: 302 ANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVR 359
Query: 297 ALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 356
A+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 360 AIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 227/360 (63%), Gaps = 7/360 (1%)
Query: 2 LFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQE--YYL 59
L +RGK GL+ +NL L V ++K RLG E +G G + F++EPFVPH QE +Y+
Sbjct: 62 LIKRRGKLGLIGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFYV 121
Query: 60 SIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGKI 118
I + R G + F GG+++ + K + + + ++ + D L+ P + + +
Sbjct: 122 CIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEIL 181
Query: 119 GDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 178
FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP P
Sbjct: 182 ASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPP 241
Query: 179 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 238
FGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL
Sbjct: 242 FGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNEL 301
Query: 239 GNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIR 296
NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+R
Sbjct: 302 ANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVR 359
Query: 297 ALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 356
A+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 360 AIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 230/376 (61%), Gaps = 25/376 (6%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYY 58
L +RGK GLV + A F K + V +G +G + TFIVEPF H + E Y
Sbjct: 61 QLIKRRGKLGLVKIGTPQELKAWFEKTG-DSYVRVGQTEGRLHTFIVEPFCAHTEKDEMY 119
Query: 59 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPL---IATL--PLE 113
++I S+R I F E GG++I + +K +T+ +P + + +A P + TL PL+
Sbjct: 120 IAIYSERFRDVIMFYEQGGVDIGDVEEKARTVSVPVQ--LNENAMTPSDEELTTLLGPLK 177
Query: 114 FRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWA-- 171
+ F++ ++ ++DL F+++E+NPF L+N + + LD+ LD+TA F KW
Sbjct: 178 DSDIVRRFVVELYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFLCADKWKSR 237
Query: 172 --------NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
++EFP PFGR L+S E +I +D KT ASLK T+LN KGR+WTMVAGGGASV
Sbjct: 238 LTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGRVWTMVAGGGASV 297
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC---ATADPDGRKRALLIGGG 280
++ DTV DLG ASEL NY EYSG P+E + +YA+ ++ T PDG + L+IGG
Sbjct: 298 VFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRPDG--KVLIIGGS 355
Query: 281 IANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLE 340
IANFT+VA TF GI+RA SKLK ++ IFVRRGGPNYQ GL +++ +L +P+
Sbjct: 356 IANFTNVAKTFGGIVRAFETFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLELPIH 415
Query: 341 VYGPEATMTGICKQAI 356
V+GPE MT I A+
Sbjct: 416 VFGPETHMTAIVGAAL 431
>sp|O13907|ACL2_SCHPO Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC22A12.16 PE=1
SV=1
Length = 492
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 225/388 (57%), Gaps = 36/388 (9%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPH--NQEYY 58
L +RGKSGL+ LN + E+++ R G ++ G +TTF+VEPFVPH N EYY
Sbjct: 89 QLIKRRGKSGLLKLNATWDEAKEWIRERAGKNQKVQHAVGYLTTFLVEPFVPHPPNTEYY 148
Query: 59 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLP---TEKHMTLDACAPLIATLPLEFR 115
++I S R G I F GG+++ + K + + +P +E + L++ +P+E
Sbjct: 149 ININSVREGDWILFCNEGGVDVGDVDAKARKLLVPVRLSEFPSRATIASTLLSDIPVEQH 208
Query: 116 GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV----NGEPYPLDMRGELDDTAAFKNFKKWA 171
+ DFI+ +++V+ D F+++E+NP ++ + + LD+ +LD TA F+ KWA
Sbjct: 209 ESLVDFIIRLYSVYVDCQFTYLEINPLVVIPTAKGADVFYLDLAAKLDQTAEFECGAKWA 268
Query: 172 --------------------------NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 205
+ FP PFGR LS E+++ LD KT ASLK T+
Sbjct: 269 VARAPESLGIKTSGEESGAINADHGPPMVFPAPFGRELSKEEAYVQGLDAKTGASLKLTI 328
Query: 206 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT 265
LN +GR+W +VAGGGASV+YAD V G A EL NY EYSGAP + + +YA+ V+D T
Sbjct: 329 LNAEGRVWNLVAGGGASVVYADAVAVNGAADELANYGEYSGAPTDGQTYEYAKTVLDLMT 388
Query: 266 -ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
+P + L IGGGIANFT A TF I RAL + + KL A ++ I+VRR GPNYQ G
Sbjct: 389 RGEPRADGKVLFIGGGIANFTSPAVTFRAIARALGDYKDKLHAHKVSIWVRRAGPNYQEG 448
Query: 325 LAKMRALGEELGIPLEVYGPEATMTGIC 352
L +R G++ +PL+VYGPE ++GI
Sbjct: 449 LRVIREAGKKFDLPLKVYGPECHISGIV 476
>sp|O67546|SUCC_AQUAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aquifex aeolicus
(strain VF5) GN=sucC PE=3 SV=1
Length = 385
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 51/337 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKG--PITTFIVEPFVPHNQEYYLSI 61
G RGK+G V + D+ ++ + V+ LG ++ C P+ ++E ++EYYL+I
Sbjct: 52 GGRGKAGGVKIVKDMDELEKAVESLLGKVLKTFQCPDGKPVNRVLIEKATNIDKEYYLAI 111
Query: 62 VSDRLGC--TISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR---- 115
DR I S GG+EIEE I + + ++ P + +P + R
Sbjct: 112 TLDRSKSKPVIMASAAGGMEIEE-------IVKENPEAIIIETIDPELGLMPYQARELAF 164
Query: 116 ------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFK 168
+ + ++ ++ DLD S +E+NP L G LD + ++DD A F++ K
Sbjct: 165 KLNLPVKEFASIALKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDIDDNALFRH-K 223
Query: 169 KWANIEFPLPFGRVLSSTESFIHSLD-EKTSASLKFTVLNPKGRIWTMVAGGGASVIYAD 227
+E E+ + L+ E L + LN G I MV G G ++ D
Sbjct: 224 DLEEME-----------DETQLPQLEVEAKKYGLNYIKLN--GNIGCMVNGAGLAMATMD 270
Query: 228 TVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDV 287
+ G E N+ + G N E++ R+++ ADPD + + I GGI +
Sbjct: 271 IIKLAG--GEPANFLDVGGGANVEQIANAFRILM----ADPDVKAVFINIFGGILRVDRL 324
Query: 288 ATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
A G+I A SK+ R+ I R G N + G
Sbjct: 325 A---QGLIEA-----SKMVELRVPIVARLEGTNVEEG 353
>sp|Q57663|SUCC_METJA Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=sucC PE=3
SV=1
Length = 364
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 77/367 (20%)
Query: 1 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKG-PITTFIVEPFVPHNQEYYL 59
+L G RGK+G + L + EF+K E+ KG + +VE +P +EYY+
Sbjct: 46 VLVGGRGKAGGI---LFASNKEEFIKK--AEELFNKEVKGEKVEKILVEEKLPIEKEYYV 100
Query: 60 SIVSDRLGCT--ISFSECGGIEIEENWDK-----------VKTIFLPTEKHMTLDACAPL 106
SI+ DR I FS GG++IEE +K V+ FLP +
Sbjct: 101 SIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKE---- 156
Query: 107 IATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 165
A LP GK+ D I ++ +F++LD + +E+NP + +G Y D LDD AAF+
Sbjct: 157 -AKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFR 215
Query: 166 N----FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGA 221
+ F+++ N E LPF V LD G + + G G
Sbjct: 216 HNYEEFEEYKNKE-KLPFAYV---------ELD---------------GDVAVIGNGAGL 250
Query: 222 SVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--G 279
++ D + +LG + + G + E V R V++ + + I G
Sbjct: 251 TLASMDIINNLGRKP--ACFLDIGGGADAETVKLALRKVLENKNV------KGIFINILG 302
Query: 280 GIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 339
GI +VA GI+ L+E + A RM G N + G R + EE GIP
Sbjct: 303 GITRCDEVAK---GIVEVLKEHPNVKFAVRMM------GTNEEIG----RKILEEHGIPY 349
Query: 340 EVYGPEA 346
E EA
Sbjct: 350 ETSMEEA 356
>sp|B4U901|SUCC_HYDS0 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hydrogenobaculum
sp. (strain Y04AAS1) GN=sucC PE=3 SV=1
Length = 382
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 152/356 (42%), Gaps = 61/356 (17%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKG--PITTFIVEPFVPHNQEYYLSI 61
G RGK+G V + ++ F + LG ++ C ++ ++E P +E+YLSI
Sbjct: 52 GARGKAGGVKIVKSDEELEAFSEAILGKILKTVQCPNGKVVSRLLIEKATPIEKEFYLSI 111
Query: 62 VSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEK--HMTLDACAPLIATLPLEFR-- 115
DR I S+ GG+EIEE L EK + + P++ +P + R
Sbjct: 112 TLDRSNSKILIMASKEGGMEIEE---------LSKEKPDAIIKEYVDPVLGIMPYQTRKL 162
Query: 116 --------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF-- 164
G + ++ + DLD S +E+NP L +G+ LD + E+DD AAF
Sbjct: 163 SFALGLNPSLFGKIVSKLYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAFRH 222
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 224
K+ ++ +I P E + + +G I MV G G ++
Sbjct: 223 KDIEELEDITQIDPL---------------EVEAKKYGLNYIKLEGNIGCMVNGAGLAMT 267
Query: 225 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANF 284
D + G A N+ + G + E++ R++ T+D + + + I GGI
Sbjct: 268 TMDIIKLAGGAP--ANFLDVGGGASVEQIANAFRIL----TSDENVKAVFINIFGGILRC 321
Query: 285 TDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLE 340
+A NG+I A +K+ ++ + VR G N + G R L +E G+ E
Sbjct: 322 DRLA---NGLIEA-----AKIVNIKIPVVVRLEGTNVEEG----RKLLKESGLNFE 365
>sp|Q49X32|SUCC_STAS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sucC PE=3 SV=1
Length = 388
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 54/375 (14%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V + L++V + K LG + + G I +E +EYY+
Sbjct: 52 GGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCDIQKEYYVG 111
Query: 61 IVSDRLG--CTISFSECGGIEIEENWDKV-KTIFLPTEKHMTLDACAPLIA-------TL 110
V DR T+ SE GG EIEE K + IF T + AP A +
Sbjct: 112 FVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVV--GLAPYQARRIAFNINI 169
Query: 111 PLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--KNF 167
P E K F++ ++ VF + D S +E+NP T GE LD + DD A F K+
Sbjct: 170 PKESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFKHKDI 229
Query: 168 KKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYAD 227
++ ++E P E + L + L+ G I MV G G ++ D
Sbjct: 230 QELRDLEEEDP-------------KEIEASKYDLSYIALD--GDIGCMVNGAGLAMATMD 274
Query: 228 TVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDV 287
T+ G N+ + G +E+V + ++++ D + + + I GGI +
Sbjct: 275 TINHFG--GNPANFLDVGGGATKEKVTEAFKIIL----GDENVKGIFVNIFGGIMKCDII 328
Query: 288 ATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEAT 347
A GI+ A++E E L + VR G N + G + + +E G+ +E P AT
Sbjct: 329 A---EGIVAAVKEVELTLP-----LVVRLEGTNVERG----KEILKESGLAIE---PAAT 373
Query: 348 MTGICKQAIDCIMSA 362
M ++ + + A
Sbjct: 374 MAEGAQKIVKLVKEA 388
>sp|A9KBQ4|SUCC_COXBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=sucC PE=3 SV=1
Length = 390
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 146/345 (42%), Gaps = 54/345 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L + ++ VK LGT + + P+ +VE +E YL
Sbjct: 52 GGRGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLG 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 112 AVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQLF 164
Query: 117 ------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 165 FGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
++ + + +T+ H E + + + G I MV G G ++
Sbjct: 225 YRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 283
D + G + N+ + G+ +E V + R+++ +D + + + I GGI
Sbjct: 272 ATMDLIKLSG--GDPANFLDVGGSATKERVTEAFRIIV----SDKNVKGILVNIFGGIVR 325
Query: 284 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 328
+A +GII A++E + + VR G N Q G K+
Sbjct: 326 CDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|A9N8R8|SUCC_COXBR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=sucC PE=3 SV=1
Length = 390
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 146/345 (42%), Gaps = 54/345 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L + ++ VK LGT + + P+ +VE +E YL
Sbjct: 52 GGRGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLG 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 112 AVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTID---PAIGLQPFQCRQLF 164
Query: 117 ------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 165 FGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
++ + + +T+ H E + + + G I MV G G ++
Sbjct: 225 YRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 283
D + G + N+ + G+ +E V + ++++ +D + + + I GGI
Sbjct: 272 ATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVR 325
Query: 284 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 328
+A +GII A++E + + VR G N Q G K+
Sbjct: 326 CDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|P53592|SUCC_COXBU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sucC PE=3 SV=2
Length = 390
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 146/345 (42%), Gaps = 54/345 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L + ++ VK LGT + + P+ +VE +E YL
Sbjct: 52 GGRGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLG 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 112 AVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTID---PAIGLQPFQCRQLF 164
Query: 117 ------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 165 FGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
++ + + +T+ H E + + + G I MV G G ++
Sbjct: 225 YRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 283
D + G + N+ + G+ +E V + ++++ +D + + + I GGI
Sbjct: 272 ATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVR 325
Query: 284 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 328
+A +GII A++E + + VR G N Q G K+
Sbjct: 326 CDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B6J8N7|SUCC_COXB1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuK_Q154) GN=sucC PE=3 SV=1
Length = 390
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 145/345 (42%), Gaps = 54/345 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L + ++ VK LGT + + P+ +VE +E YL
Sbjct: 52 GGRGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLG 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 112 AVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQLF 164
Query: 117 ------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 165 FGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
++ + + +T+ H E + + + G I MV G G ++
Sbjct: 225 YRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 283
D + G + N+ + G+ +E V + +++ +D + + + I GGI
Sbjct: 272 ATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKII----ASDKNVKGILVNIFGGIVR 325
Query: 284 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 328
+A +GII A++E + + VR G N Q G K+
Sbjct: 326 CDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B2V8I4|SUCC_SULSY Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=sucC
PE=3 SV=1
Length = 389
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 47/350 (13%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEVE--MGGCKG-PITTFIVEPFVPHNQEYYLS 60
G RGK+G V L + +V + LG ++ G +G P++ +E ++E+Y++
Sbjct: 52 GGRGKAGGVKLAKSIEEVQQIASELLGKKLATFQTGPEGLPVSRLYIEEATAIDKEFYVA 111
Query: 61 IVSDRLGCT--ISFSECGGIEIEE----NWDKV--KTI--FLPTEKHMTLDACAPLIATL 110
I DR I S GG+EIEE N + + +TI F+ + + L L
Sbjct: 112 ITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIITQTIEPFIGLRSYHARELALKL--GL 169
Query: 111 PLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKK 169
P K ++ ++ +LD S +E+NP L +G LD + E DD F++ +
Sbjct: 170 PKNLLNKAASIFTTLYKIYIELDASMVEINPLVLTKDGNIVILDAKIEFDDNGLFRH-PE 228
Query: 170 WANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTV 229
++ P + + F +L + L+ G I MV G G ++ DT+
Sbjct: 229 IMEMDDPTQISPLEVEAKKF----------NLNYIKLD--GNIACMVNGAGLAMSTMDTI 276
Query: 230 GDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAT 289
G E N+ + G+ N ++ ++++ +DP+ + + I GGI +A
Sbjct: 277 KLAG--GEPANFLDVGGSANATQIANAFKIIL----SDPNVKAIFINIFGGILRCDRLA- 329
Query: 290 TFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 339
GII A +E + + + VR G N + G + + +E G+PL
Sbjct: 330 --EGIITAAKE-----VSINVPVIVRMEGTNVELG----KKMLQESGLPL 368
>sp|A8ZRW7|SUCC_DESOH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=sucC PE=3 SV=1
Length = 388
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 44/296 (14%)
Query: 42 ITTFIVEPFVPHNQEYYLSIVSDR--LGCTISFSECGGIEIEE----NWDKVKTIFLPTE 95
+ +VE V +E YLS+V+DR G I SE GG++IE +K+ +F+
Sbjct: 93 VQKVLVEQGVSIAKELYLSVVADRETAGIVIMASEAGGMDIEAVAETTPEKILKVFVNPL 152
Query: 96 KHMTLDAC--APLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEP-YPL 152
++ C A LP E + G+F +F D D S +E+NP L + L
Sbjct: 153 AGLSAFHCRQAAYGLNLPAEAIKPFTQVVSGLFKLFVDYDASLVEINPLILTTDKAVMAL 212
Query: 153 DMRGELDDTAAFKNFKKWA----NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNP 208
D + DD+A F++ A + E PL E ++ +N
Sbjct: 213 DAKINFDDSALFRHKDILALRDTDEEDPL-----------------EVEASRFNLNYINM 255
Query: 209 KGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADP 268
G + MV G G ++ D + G +E N+ + G N E V R+++ +DP
Sbjct: 256 DGNVGNMVNGAGLAMATMDIIKLAG--AEPANFLDVGGGANAEMVENGFRIIL----SDP 309
Query: 269 DGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
+ + I GGI +A+ GI++A R A + + VR G N G
Sbjct: 310 KVKCILVNIFGGILRCDVLAS---GIVQAARN-----TAIHVPLVVRMEGTNVDEG 357
>sp|B6IZ97|SUCC_COXB2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuG_Q212) GN=sucC PE=3 SV=1
Length = 390
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 145/345 (42%), Gaps = 54/345 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L + ++ VK LG + + P+ +VE +E YL
Sbjct: 52 GGRGKAGGVRLVKNKEELKSAVKALLGMRLVTYQTDERGQPVNQILVEQTSDIARELYLG 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 112 AVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQLF 164
Query: 117 ------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 165 FGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
++ + + +T+ H E + + + G I MV G G ++
Sbjct: 225 YRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 283
D + G + N+ + G+ +E V + ++++ +D + + + I GGI
Sbjct: 272 ATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVR 325
Query: 284 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKM 328
+A +GII A++E + + VR G N Q G K+
Sbjct: 326 CDLIA---DGIISAVKE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|A3DLR9|SUCC_STAMF Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=sucC PE=3
SV=1
Length = 379
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 146/352 (41%), Gaps = 59/352 (16%)
Query: 1 MLFGKRGKSG--LVALN-LDLAQVAE--FVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ 55
+L G+RG +G L A N L+ +VA F K G +VE+ +VE + ++
Sbjct: 48 VLVGRRGLAGGVLFASNSLEAEKVARELFSKRVRGEKVEL---------ILVEEKICIDK 98
Query: 56 EYYLSIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMT------LDACAPLI 107
EYYLS+ DR I + S GG+EIEE K L + A
Sbjct: 99 EYYLSLTIDRSNREIVYLVSPLGGVEIEELVKKYPDKLLRIRVDPVIGYKPYMSRLAAKF 158
Query: 108 ATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFT-LVNGEPYPLDMRGELDDTAAFKN 166
LP E + + ++ + ++ D +E NP + E +D + +DD + ++
Sbjct: 159 LGLPKELWPSMHKIMNSMYNIMKNYDADLVEFNPLVKTCSNEIVAVDAKITIDDNSLYR- 217
Query: 167 FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYA 226
+IEF +GR LS E+ + L F+ + G I M G G ++
Sbjct: 218 -----HIEFAEKYGRELSEMEAI--------AKKLGFSYVELDGDIGIMCNGAGLTMATM 264
Query: 227 DTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANF 284
D V Y N+ + G + E V + A++++ + + LL+ GGI
Sbjct: 265 DMVA--YYGGRPANFLDIGGGASRERVREAAKLLL------KHDKVKVLLVNIFGGITRC 316
Query: 285 TDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELG 336
+VA GII A+ E + I +R G N + G R L EE G
Sbjct: 317 NEVA---RGIIEAVEE-----TGVKKPIVIRLLGTNEEIG----RRLLEEKG 356
>sp|Q5X7K6|SUCC_LEGPA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Paris) GN=sucC PE=3 SV=1
Length = 387
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 63/345 (18%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L ++A K LGT + + P+ +VE ++E YL
Sbjct: 52 GGRGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLG 111
Query: 61 IVSDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I S GG+EIE+ + T + + PL+ +P + R
Sbjct: 112 AVVDRATRRVVIMASTEGGVEIEK-------VAHETPEKIFKVVVDPLVGVMPFQCRETA 164
Query: 117 -KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
K+G +MG+ +F D D S +E+NP + +G+ LD + +D A F
Sbjct: 165 FKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALF 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGA 221
+ K L + D + AS L + L+ G I MV G G
Sbjct: 225 RQPK--------------LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGL 268
Query: 222 SVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--G 279
++ D + + E N+ + G +E V + ++++ D + + +L+ G
Sbjct: 269 AMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFG 320
Query: 280 GIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
GI +A +GI+ A++E + K+ + VR G N Q G
Sbjct: 321 GIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|A5UIW0|SUCC_HAEIG Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain PittGG) GN=sucC PE=3 SV=1
Length = 394
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 52/318 (16%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L D+ + F + LG + + P+ E ++E+YLS
Sbjct: 52 GGRGKAGGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLS 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR + F S GG++IEE + E PL LP + R
Sbjct: 112 AVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVE-------IDPLFGGLPYQGRELA 164
Query: 117 -KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
K+G D MG+ +F + D S +E+NP L G LD + +DD A F
Sbjct: 165 FKLGLSDAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKIAVDDNALF 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV--LNPKGRIWTMVAGGGAS 222
++ + LS+ + + D + + + KF + + +G I MV G G +
Sbjct: 225 RH--------------KDLSALQDLTQN-DAREAEAEKFQLNYVALEGDIGCMVNGAGLA 269
Query: 223 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIA 282
+ D V Y + N+ + G +E V + ++++ DP + + I GGI
Sbjct: 270 MGTMDIVK--LYGGKPANFLDVGGGATKERVAEAFKIIL----TDPSVKVILVNIFGGIV 323
Query: 283 NFTDVATTFNGIIRALRE 300
+A G+I A+ E
Sbjct: 324 RCDLIA---EGVIAAVNE 338
>sp|Q5WZ04|SUCC_LEGPL Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Lens) GN=sucC PE=3 SV=1
Length = 387
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 63/345 (18%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L ++A K LGT + + P+ +VE ++E YL
Sbjct: 52 GGRGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLG 111
Query: 61 IVSDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I S GG+EIE+ + T + + PL+ +P + R
Sbjct: 112 AVVDRSTRRVVIMASTEGGVEIEK-------VAHETPEKIFKVVVDPLVGVMPFQCRETA 164
Query: 117 -KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
K+G +MG+ +F D D S +E+NP + +G+ LD + +D A F
Sbjct: 165 FKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALF 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGA 221
+ K L + D + AS L + L+ G I MV G G
Sbjct: 225 RQPK--------------LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGL 268
Query: 222 SVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--G 279
++ D + + E N+ + G +E V + ++++ D + + +L+ G
Sbjct: 269 AMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFG 320
Query: 280 GIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
GI +A +GI+ A++E + K+ + VR G N Q G
Sbjct: 321 GIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|A5IH21|SUCC_LEGPC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Corby) GN=sucC PE=3 SV=1
Length = 387
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 63/345 (18%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L ++A K LGT + + P+ +VE ++E YL
Sbjct: 52 GGRGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLG 111
Query: 61 IVSDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR I S GG+EIE+ + T + + PL+ +P + R
Sbjct: 112 AVVDRSTRRVVIMASTEGGVEIEK-------VAHETPEKIFKVVVDPLVGVMPFQCRETA 164
Query: 117 -KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
K+G +MG+ +F D D S +E+NP + +G+ LD + +D A F
Sbjct: 165 FKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALF 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGA 221
+ K L + D + AS L + L+ G I MV G G
Sbjct: 225 RQPK--------------LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGL 268
Query: 222 SVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--G 279
++ D + + E N+ + G +E V + ++++ D + + +L+ G
Sbjct: 269 AMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFG 320
Query: 280 GIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
GI +A +GI+ A++E + K+ + VR G N Q G
Sbjct: 321 GIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|A0LIY8|SUCC_SYNFM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=sucC PE=3 SV=1
Length = 388
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 46/329 (13%)
Query: 12 VALNLDLAQVAEFVKGRLGTEVEMGGCKGP----ITTFIVEPFVPHNQEYYLSIVSDRLG 67
V L A+V ++ KG LG + + GP + +VE +P +E YLS++ DR
Sbjct: 60 VKLAKSAAEVDQYAKGILGMTL-VTHQTGPEGRLVKKLLVEEGLPIEKELYLSVLPDRGT 118
Query: 68 CTISF--SECGGIEIEE----NWDKVKTIFLPTE---KHMTLDACAPLIATLPLEFRGKI 118
I F SE GG++IEE +K+ +F+ K + A + P E +
Sbjct: 119 SKIVFMASEAGGMDIEEVAAKTPEKIIKVFIDPLLGFKGFHANELAYGLNLKP-ELIKQF 177
Query: 119 GDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWANIEF 175
+ ++ + D D S +E+NP L + LD + DD A + K+ +++ +++
Sbjct: 178 NAMVAALYKLCTDYDCSLVEINPLVLTSDNRVIALDGKINFDDNAMYRHKDIQEYRDLDE 237
Query: 176 PLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYA 235
PF E + L + + P G I MV G G ++ D + G A
Sbjct: 238 EDPFEI-------------EASKFELNYIKM-PGGNIGNMVNGAGLAMATMDIIQQAGAA 283
Query: 236 SELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGII 295
N+ + G + E+V R+++ ADP + + I GGI +A NG++
Sbjct: 284 P--ANFLDVGGGASAEQVENGFRIIL----ADPAVKGVLINIFGGILRCDRLA---NGVV 334
Query: 296 RALREKESKLKAARMHIFVRRGGPNYQTG 324
A +K R+ + +R G N + G
Sbjct: 335 EA-----AKKVGIRVPVVIRMEGTNVEQG 358
>sp|A5UCR4|SUCC_HAEIE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain PittEE) GN=sucC PE=3 SV=1
Length = 389
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 52/318 (16%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L D+ + F + LG + + P+ E ++E+YLS
Sbjct: 52 GGRGKAGGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLS 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR + F S GG++IEE + E PL LP + R
Sbjct: 112 AVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVE-------IDPLFGGLPYQGRELA 164
Query: 117 -KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
K+G D MG+ +F + D S +E+NP L G LD + +DD A F
Sbjct: 165 FKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKIAVDDNALF 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV--LNPKGRIWTMVAGGGAS 222
++ + LS+ + + D + + + KF + + +G I MV G G +
Sbjct: 225 RH--------------KDLSALQDLTQN-DAREAEAEKFQLNYVALEGDIGCMVNGAGLA 269
Query: 223 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIA 282
+ D V Y + N+ + G +E V + ++++ DP + + I GGI
Sbjct: 270 MGTMDIVK--LYGGKPANFLDVGGGATKERVAEAFKIIL----TDPSVKVILVNIFGGIV 323
Query: 283 NFTDVATTFNGIIRALRE 300
+A G+I A+ E
Sbjct: 324 RCDLIA---EGVIAAVNE 338
>sp|A4IZC2|SUCC_FRATW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain WY96-3418) GN=sucC
PE=3 SV=1
Length = 387
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + + E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L KG I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--KGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|Q2A253|SUCC_FRATH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain LVS) GN=sucC PE=3
SV=1
Length = 387
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + I E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|A7NDR1|SUCC_FRATF Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain FTNF002-00 / FTA)
GN=sucC PE=3 SV=1
Length = 387
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + I E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|Q0BKS4|SUCC_FRATO Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain OSU18) GN=sucC PE=3
SV=1
Length = 387
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + I E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|Q5WFP4|SUCC_BACSK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus clausii
(strain KSM-K16) GN=sucC PE=3 SV=1
Length = 386
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 145/343 (42%), Gaps = 43/343 (12%)
Query: 4 GKRGKSG--LVALNLDLAQV-AEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G VA NLD + AE + G+ + G + ++E EYY+
Sbjct: 52 GGRGKAGGVKVAKNLDEVRTYAEEILGKTLVTHQTGPAGKEVKRLLIEEGCDIKSEYYIG 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDACA-PLIATLPL 112
+V DR ++ SE GG EIEE +K K + P A +P
Sbjct: 112 LVVDRATSSVVLMASEEGGTEIEEVAEKTPEKIFKEVIDPAVGLQGFQARRIAFNINIPK 171
Query: 113 EFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--KNFKK 169
E G+ F+MG++ VF D D S E+NP T +G+ LD + D A + K+ +
Sbjct: 172 ELVGQAVKFMMGLYQVFVDKDASIAEINPLVTTGDGKVMALDAKFNFDSNALYRHKDILE 231
Query: 170 WANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTV 229
++E E + + E + L + L+ G I MV G G ++ D +
Sbjct: 232 LRDLE------------EEDVKEI-EASKHDLNYIALD--GNIGCMVNGAGLAMATMDII 276
Query: 230 GDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAT 289
Y + N+ + G E+V + ++++ +D + + + I GGI +A
Sbjct: 277 KH--YNGDPANFLDVGGGATAEKVTEAFKLIL----SDENVKGIFVNIFGGIMKCDIIA- 329
Query: 290 TFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALG 332
+G+I A +E + + VR G N + G ++ G
Sbjct: 330 --DGVIAATKE-----VGLEIPLVVRLEGTNVELGKKMLKESG 365
>sp|Q5NHF3|SUCC_FRATT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=sucC PE=3 SV=1
Length = 387
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + + E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAILINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|Q14IV5|SUCC_FRAT1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain FSC 198) GN=sucC
PE=3 SV=1
Length = 387
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + + E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAILINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|B0TZ23|SUCC_FRAP2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
philomiragia subsp. philomiragia (strain ATCC 25017)
GN=sucC PE=3 SV=1
Length = 387
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 53/319 (16%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G V + + E + +GT + + P+ + + E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|B2SDM1|SUCC_FRATM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. mediasiatica (strain FSC147) GN=sucC
PE=3 SV=1
Length = 387
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + + E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|A0Q5H4|SUCC_FRATN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. novicida (strain U112) GN=sucC PE=3
SV=1
Length = 387
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 4 GKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTF-IVEPFVPHNQEYYL 59
G RGK+G +V + + +VAE + G+ + P+ + + E P +E YL
Sbjct: 52 GGRGKAGGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYL 111
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR-- 115
V DR ++F S GG++IEE L E PL+ P + R
Sbjct: 112 GAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVE-------VDPLVGLQPFQAREV 164
Query: 116 --------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAA 163
+I DF+ +G + F + DF+ E+NP + NGE +D + LD A
Sbjct: 165 AFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNAL 224
Query: 164 FKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
+++ K A + + L ++E L + L +G I MV G G ++
Sbjct: 225 YRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAM 271
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGI 281
D + Y + N+ + G +E V++ ++++D D +A+LI GGI
Sbjct: 272 ATMDII--QLYGGKPANFLDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGI 323
Query: 282 ANFTDVATTFNGIIRALRE 300
+A II A++E
Sbjct: 324 VRCDMIAEA---IIEAVKE 339
>sp|Q1H031|SUCC_METFK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=sucC
PE=3 SV=1
Length = 387
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 145/345 (42%), Gaps = 63/345 (18%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L L +V + LG + + P+ +VE +P +E Y+S
Sbjct: 52 GGRGKAGGVKLVRTLDEVQDIAVSLLGKRLVTYQNAPDGQPVEKVLVEATLPIARELYVS 111
Query: 61 IVSDRL--GCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR--- 115
++ DR + S GG+EIEE I + + + + C PL + + R
Sbjct: 112 MLVDRSLERVVLVASAAGGMEIEE-------IAKDSPEKILQEVCDPLNGLVDYQARNIA 164
Query: 116 ---GKIGDFIM-------GVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
G +GD + G++ +F++ D + +E+NP + G LD + +DD A +
Sbjct: 165 FALGLVGDQVAAFTRLAKGLYRLFKENDLALLEINPLIVTAEGALVALDCKMSVDDNALY 224
Query: 165 KNF-----KKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGG 219
+ + W+ + + E+ H +A L + LN G I MV G
Sbjct: 225 RRRELAEQRDWSQDD----------AKEAEAH------NAGLNYIALN--GNIGCMVNGA 266
Query: 220 GASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGG 279
G ++ D + G A N+ + G V + ++++ ADP+ + + I G
Sbjct: 267 GLAMATMDLIKLHGGAP--ANFLDVGGGATATTVARAFKIIL----ADPNVKAILVNIFG 320
Query: 280 GIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
GI +A GII A++E + + VR G N + G
Sbjct: 321 GIMRCDIIA---EGIITAVKE-----VGIEIPVVVRLEGTNVELG 357
>sp|P45101|SUCC_HAEIN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucC PE=3 SV=1
Length = 389
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 127/316 (40%), Gaps = 48/316 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L D+ + F + LG + + P+ E ++E+YLS
Sbjct: 52 GGRGKAGGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLS 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR + F S GG+ IEE + +T+D PL LP + R
Sbjct: 112 AVVDRTSQKVVFIASSEGGMNIEEVVQNSPHLL----HKVTID---PLFGGLPYQGRELA 164
Query: 117 -KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
K+G D MG+ +F + D S +E+NP L G LD + +DD A F
Sbjct: 165 FKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTPQGNLVCLDAKISVDDNALF 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 224
++ A + R E + + + +G I MV G G ++
Sbjct: 225 RHKDLLALQDLTQNDAR-------------EAEAEKFQLNYVALEGDIGCMVNGAGLAMG 271
Query: 225 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANF 284
D V Y + N+ + G +E V + ++++ DP + + I GGI
Sbjct: 272 TMDIVK--LYGGKPANFLDVGGGATQERVAEAFKIIL----TDPSVKVILVNIFGGIVRC 325
Query: 285 TDVATTFNGIIRALRE 300
+A G+I A+ E
Sbjct: 326 DLIA---EGVIAAVNE 338
>sp|Q65JP0|SUCC_BACLD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3
SV=1
Length = 386
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V + +V + + LG + + G I ++E +EYY+
Sbjct: 52 GGRGKAGGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYVG 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDK-----VKTIFLPTEKHMTLDACAPLIA-TLPL 112
+V DR I SE GG EIEE +K VK + P + A A +P
Sbjct: 112 LVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIPK 171
Query: 113 EFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKK 169
E G+ F+MG++ F + D S E+NP + +G+ LD + D A + K+ +
Sbjct: 172 ELVGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILE 231
Query: 170 WANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTV 229
+ +++ P E ++ + ++ G I MV G G ++ D +
Sbjct: 232 YRDLDEEDP---------------KEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDII 276
Query: 230 GDLGYASELGNYAEYSGAPNEEEVLQYARVVI 261
Y E N+ + G E+V + ++++
Sbjct: 277 KH--YGGEPANFLDVGGGATAEKVTEAFKIIL 306
>sp|C5D8V2|SUCC_GEOSW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus sp.
(strain WCH70) GN=sucC PE=3 SV=1
Length = 386
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 55/341 (16%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGP----ITTFIVEPFVPHNQEYYL 59
G RGK+G V + L +V + LG +V + GP + ++E +EYY+
Sbjct: 52 GGRGKAGGVKVAKSLDEVRTYASELLG-KVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYI 110
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKV-KTIFLPTEKHMTLDACAPLIA-------- 108
+V DR + SE GG EIEE K + IF +D L A
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIF-----KEYIDPAVGLQAFQARRLAF 165
Query: 109 --TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF- 164
+P E + F+MG++ VF D D S E+NP + +G+ LD + D A +
Sbjct: 166 NINIPKELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYR 225
Query: 165 -KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 223
K+ ++ +++ P E + L + L+ G I MV G G ++
Sbjct: 226 HKDILEYRDLDEEDP-------------KEVEASKYDLNYIALD--GNIGCMVNGAGLAM 270
Query: 224 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 283
D + Y E N+ + G E+V + ++++ +DP+ + + I GGI
Sbjct: 271 ATMDIIKY--YGGEPANFLDVGGGATAEKVTEAFKIIL----SDPNVKGIFVNIFGGIMK 324
Query: 284 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
+A+ GI+ A +K + + VR G N + G
Sbjct: 325 CDVIAS---GIVEA-----TKQVGLNLPLVVRLEGTNVELG 357
>sp|A4IM83|SUCC_GEOTN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1
Length = 386
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 45/336 (13%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGP----ITTFIVEPFVPHNQEYYL 59
G RGK+G V + L +V + LG +V + GP + ++E +EYY+
Sbjct: 52 GGRGKAGGVKVAKSLEEVRTYASELLG-KVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYI 110
Query: 60 SIVSDRLGCTISF--SECGGIEIEENWDKV-KTIFLP-TEKHMTLDA-CAPLIA---TLP 111
+V DR + SE GG EIEE K + IF + + L A A +A +P
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYVDPAVGLQAFQARRLAFNINIP 170
Query: 112 LEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK--NFK 168
+ + F+MG++ VF D D S E+NP + +G+ LD + D A ++ +
Sbjct: 171 KKLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIM 230
Query: 169 KWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADT 228
++ +++ P E + L + L+ G I MV G G ++ D
Sbjct: 231 EYRDLDEEDP-------------KEVEASKYDLNYIALD--GNIGCMVNGAGLAMATMDI 275
Query: 229 VGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVA 288
+ Y E N+ + G +EE+V + ++++ +DP+ + + I GGI +A
Sbjct: 276 IKY--YGGEPANFLDVGGGASEEKVTEAFKIIL----SDPNVKGIFVNIFGGIMKCDVIA 329
Query: 289 TTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
+ GI+ A +K + + VR G N + G
Sbjct: 330 S---GIVAA-----TKQVGLTLPLVVRLEGTNVELG 357
>sp|Q9PAH1|SUCC_XYLFA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella
fastidiosa (strain 9a5c) GN=sucC PE=3 SV=1
Length = 387
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 49/338 (14%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V +V + LGT++ + G P+ +V +E YLS
Sbjct: 52 GGRGKAGGVKFCKTTDEVKQAAAAMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYLS 111
Query: 61 IVSDRLGCTISF--SECGGIEIE----ENWDKVKTIFLPTEKHMTLDACAPLIATLPLEF 114
++ DR +I++ S GG++IE E +K++T+ + + + + L LE
Sbjct: 112 VLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLEA 171
Query: 115 R--GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWA 171
+ ++ ++ ++ +F D D S IE+NP ++ NG+ Y LD + DD A F++
Sbjct: 172 KQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRH----- 226
Query: 172 NIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADT 228
+ L++ + + AS L + ++ G I MV G G ++ D
Sbjct: 227 ---------KELAAMRDKTQEDETEVLASENDLNYVTMD--GNIGCMVNGAGLAMATMDV 275
Query: 229 VGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTD 286
+ G E N+ + G +E V ++++ + +A+ + GGI
Sbjct: 276 IKLNG--GEPANFLDVGGGATKERVTTAFKLILSS------NKVKAIFVNIFGGIVRCDM 327
Query: 287 VATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
+A GII A++E ++ + VR G N G
Sbjct: 328 IA---EGIIAAVKE-----VGVKVPVIVRLEGTNVDAG 357
>sp|Q3SKM1|SUCC_THIDA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=sucC PE=3 SV=1
Length = 386
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 141/340 (41%), Gaps = 53/340 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLG---TEVEMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V + + V LG V+ P+ T +VE +P +E YLS
Sbjct: 52 GGRGKAGGVKVVTSIDAVRSVAAALLGKPLVTVQNAPDGQPVHTVLVEETLPIARELYLS 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFR--- 115
++ DR ++ S GG++IE+ + T + + + C PL+ + R
Sbjct: 112 LLVDRASERVAVVASAAGGMDIEQ-------VAHATPEKVLTEICDPLLGVQDFQCRALA 164
Query: 116 ---GKIGD-------FIMGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAF 164
G GD + ++ VF D S +E+NP + + PLD + +DD A +
Sbjct: 165 FALGLGGDAYKDFCRLLPQLYRVFVANDLSLLEINPLVVTTDNRVLPLDCKMSVDDNALY 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 224
+ K A++ +S I + E + + + G I MV G G ++
Sbjct: 225 RR-KALADLR-----------DDSQIDA-KEAAANAANVNYVALAGNIGCMVNGAGLAMA 271
Query: 225 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANF 284
D + G A N+ + G E V Q ++++ DP+ + + I GGI
Sbjct: 272 TMDLIQLEGGAP--ANFLDVGGGATPETVAQGFKIIL----LDPNVKAVLINIFGGIVRC 325
Query: 285 TDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
+A GII+A+RE + + VR G N + G
Sbjct: 326 DVIA---EGIIQAVRE-----VGVEVPVIVRLEGTNAELG 357
>sp|Q4QLA3|SUCC_HAEI8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain 86-028NP) GN=sucC PE=3 SV=1
Length = 389
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 127/316 (40%), Gaps = 48/316 (15%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V L D+ + F + LG + + P+ E ++E+YLS
Sbjct: 52 GGRGKAGGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLS 111
Query: 61 IVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG-- 116
V DR + F S GG+ IEE V L + +D PL LP + R
Sbjct: 112 AVVDRASQKVMFIASPAGGMNIEE----VAQNSLHLLHKVEID---PLFGGLPYQGRELA 164
Query: 117 -KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 164
K+G D MG+ +F + D S +E+NP L G LD + +DD A F
Sbjct: 165 FKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTKQGYLVCLDAKISVDDNALF 224
Query: 165 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 224
++ A + R E + + + +G I MV G G ++
Sbjct: 225 RHKDLLALQDLTQNDAR-------------EAEAEKFQLNYVALEGDIGCMVNGAGLAMG 271
Query: 225 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANF 284
D V Y + N+ + G +E V + ++++ DP + + I GGI
Sbjct: 272 TMDIVK--LYGGKPANFLDVGGGATKERVAEAFKIIL----TDPSVKVILVNIFGGIVRC 325
Query: 285 TDVATTFNGIIRALRE 300
+A G+I A+ E
Sbjct: 326 DLIA---EGVIAAVNE 338
>sp|Q87A98|SUCC_XYLFT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella
fastidiosa (strain Temecula1 / ATCC 700964) GN=sucC PE=3
SV=1
Length = 387
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 49/338 (14%)
Query: 4 GKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLS 60
G RGK+G V +V + LGT++ + G P+ +V +E YLS
Sbjct: 52 GGRGKAGGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYLS 111
Query: 61 IVSDRLGCTISF--SECGGIEIE----ENWDKVKTIFLPTEKHMTLDACAPLIATLPLEF 114
++ DR +I++ S GG++IE E +K++T+ + + + + L LE
Sbjct: 112 VLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLEA 171
Query: 115 R--GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWA 171
+ ++ ++ ++ +F D D S IE+NP ++ NG+ Y LD + DD A F++
Sbjct: 172 KQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRH----- 226
Query: 172 NIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADT 228
+ L++ + + AS L + ++ G I MV G G ++ D
Sbjct: 227 ---------KELAAMRDKTQEDETEVLASENDLNYVTMD--GNIGCMVNGAGLAMATMDV 275
Query: 229 VGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTD 286
+ G E N+ + G +E V ++++ + +A+ + GGI
Sbjct: 276 IKLNG--GEPANFLDVGGGATKERVTTAFKLILSS------NKVKAIFVNIFGGIVRCDM 327
Query: 287 VATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 324
+A GII A++E ++ + VR G N G
Sbjct: 328 IA---EGIIAAVKE-----VGVKVPVIVRLEGTNVDAG 357
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,142,384
Number of Sequences: 539616
Number of extensions: 6055676
Number of successful extensions: 13828
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 358
Number of HSP's that attempted gapping in prelim test: 13574
Number of HSP's gapped (non-prelim): 384
length of query: 363
length of database: 191,569,459
effective HSP length: 119
effective length of query: 244
effective length of database: 127,355,155
effective search space: 31074657820
effective search space used: 31074657820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)