Query 017967
Match_columns 363
No_of_seqs 252 out of 2377
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:59:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017967.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017967hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 3.2E-53 7E-58 386.8 26.8 300 59-359 2-301 (396)
2 KOG1411 Aspartate aminotransfe 100.0 8.4E-53 1.8E-57 376.4 22.6 315 45-359 14-328 (427)
3 PLN02397 aspartate transaminas 100.0 2E-48 4.3E-53 380.0 33.1 324 36-359 1-324 (423)
4 PTZ00376 aspartate aminotransf 100.0 3.5E-47 7.6E-52 369.7 29.9 302 58-359 4-306 (404)
5 KOG1412 Aspartate aminotransfe 100.0 1.6E-47 3.4E-52 338.3 23.5 304 56-359 3-308 (410)
6 PRK09257 aromatic amino acid a 100.0 6.5E-46 1.4E-50 360.0 31.8 298 59-359 2-301 (396)
7 COG0436 Aspartate/tyrosine/aro 100.0 6.2E-46 1.3E-50 357.2 27.5 258 83-361 28-287 (393)
8 PLN00175 aminotransferase fami 100.0 4.5E-41 9.8E-46 327.4 28.0 275 61-362 35-310 (413)
9 PLN02187 rooty/superroot1 100.0 8.8E-41 1.9E-45 329.0 28.0 270 80-362 63-335 (462)
10 PLN00143 tyrosine/nicotianamin 100.0 1.3E-40 2.9E-45 323.9 27.1 275 70-358 19-296 (409)
11 PLN02368 alanine transaminase 100.0 2.2E-40 4.9E-45 320.5 27.7 246 102-359 82-342 (407)
12 PRK07681 aspartate aminotransf 100.0 1.7E-40 3.7E-45 322.4 25.6 276 65-362 12-290 (399)
13 KOG0257 Kynurenine aminotransf 100.0 8.4E-41 1.8E-45 308.2 21.3 277 61-360 11-294 (420)
14 PRK07366 succinyldiaminopimela 100.0 3.4E-40 7.5E-45 319.2 25.4 253 83-355 30-284 (388)
15 PRK08636 aspartate aminotransf 100.0 3.2E-40 6.8E-45 320.9 24.9 283 62-362 10-299 (403)
16 PRK08068 transaminase; Reviewe 100.0 3.8E-40 8.3E-45 319.0 25.2 259 83-362 32-291 (389)
17 PRK06207 aspartate aminotransf 100.0 7.6E-40 1.6E-44 318.2 26.1 266 77-362 32-302 (405)
18 PRK06348 aspartate aminotransf 100.0 7.4E-40 1.6E-44 316.4 25.3 272 66-362 14-285 (384)
19 PRK09147 succinyldiaminopimela 100.0 1.9E-39 4.2E-44 314.7 28.0 273 63-357 6-291 (396)
20 TIGR03540 DapC_direct LL-diami 100.0 1E-39 2.2E-44 315.3 25.5 260 82-362 28-288 (383)
21 PLN02656 tyrosine transaminase 100.0 2.7E-39 5.8E-44 314.9 27.5 260 81-358 29-295 (409)
22 PLN02607 1-aminocyclopropane-1 100.0 2.3E-39 4.9E-44 317.4 27.1 263 77-359 40-326 (447)
23 PLN00145 tyrosine/nicotianamin 100.0 3.2E-39 6.9E-44 315.7 28.0 263 82-358 51-316 (430)
24 PTZ00377 alanine aminotransfer 100.0 1.7E-39 3.7E-44 322.2 25.9 264 83-358 46-349 (481)
25 PLN02450 1-aminocyclopropane-1 100.0 2.8E-39 6.1E-44 318.8 27.3 263 77-359 31-319 (468)
26 PRK09276 LL-diaminopimelate am 100.0 2E-39 4.4E-44 313.5 25.7 259 83-362 31-290 (385)
27 PLN02376 1-aminocyclopropane-1 100.0 4E-39 8.7E-44 319.0 27.9 275 65-359 22-326 (496)
28 PRK13355 bifunctional HTH-doma 100.0 5.2E-39 1.1E-43 321.3 27.8 281 61-359 122-406 (517)
29 PRK06855 aminotransferase; Val 100.0 7.7E-39 1.7E-43 313.5 28.3 262 84-359 33-298 (433)
30 PRK09148 aminotransferase; Val 100.0 4.2E-39 9.2E-44 313.0 25.8 259 83-362 30-289 (405)
31 TIGR01264 tyr_amTase_E tyrosin 100.0 1E-38 2.3E-43 310.1 27.8 276 68-358 14-292 (401)
32 PRK08960 hypothetical protein; 100.0 6.4E-39 1.4E-43 310.2 26.0 271 62-358 9-281 (387)
33 PRK07682 hypothetical protein; 100.0 6.5E-39 1.4E-43 309.2 25.0 257 83-362 20-277 (378)
34 PRK06290 aspartate aminotransf 100.0 9.9E-39 2.2E-43 310.4 26.4 253 84-359 45-299 (410)
35 PRK05942 aspartate aminotransf 100.0 5.8E-39 1.3E-43 311.2 24.7 258 83-361 35-293 (394)
36 PRK12414 putative aminotransfe 100.0 6.8E-39 1.5E-43 309.6 24.8 256 83-361 29-285 (384)
37 PTZ00433 tyrosine aminotransfe 100.0 1.5E-38 3.3E-43 309.9 26.5 275 70-358 19-301 (412)
38 TIGR03538 DapC_gpp succinyldia 100.0 2.5E-38 5.4E-43 306.7 27.5 272 65-358 7-291 (393)
39 PLN02231 alanine transaminase 100.0 7.8E-38 1.7E-42 311.7 28.9 262 81-358 127-401 (534)
40 PRK07337 aminotransferase; Val 100.0 4.4E-38 9.5E-43 304.5 25.0 251 82-358 29-279 (388)
41 PRK07550 hypothetical protein; 100.0 6E-38 1.3E-42 303.3 25.6 278 64-362 8-287 (386)
42 PRK07309 aromatic amino acid a 100.0 1.2E-37 2.5E-42 301.7 27.3 258 83-362 30-288 (391)
43 PRK05839 hypothetical protein; 100.0 7.1E-38 1.5E-42 301.4 25.5 266 68-358 6-279 (374)
44 PRK06107 aspartate aminotransf 100.0 7.1E-38 1.5E-42 304.3 25.2 259 82-362 32-292 (402)
45 COG1167 ARO8 Transcriptional r 100.0 5.8E-38 1.3E-42 308.2 24.7 255 82-358 88-345 (459)
46 PRK07683 aminotransferase A; V 100.0 9.9E-38 2.1E-42 301.8 25.8 256 83-362 28-284 (387)
47 PRK07590 L,L-diaminopimelate a 100.0 7.2E-38 1.6E-42 304.9 24.2 253 82-358 33-308 (409)
48 PRK05957 aspartate aminotransf 100.0 1.6E-37 3.4E-42 300.6 25.6 257 83-362 27-284 (389)
49 PRK08912 hypothetical protein; 100.0 1.4E-37 3E-42 300.9 25.1 257 83-362 26-283 (387)
50 PRK06108 aspartate aminotransf 100.0 1.8E-37 3.9E-42 299.5 25.8 259 83-362 24-283 (382)
51 PRK09082 methionine aminotrans 100.0 8.5E-38 1.8E-42 302.2 23.3 256 84-362 31-287 (386)
52 PRK07777 aminotransferase; Val 100.0 2.9E-37 6.3E-42 298.6 25.8 275 63-362 7-283 (387)
53 PRK08361 aspartate aminotransf 100.0 2.4E-37 5.2E-42 299.6 24.9 256 83-362 33-288 (391)
54 PRK07324 transaminase; Validat 100.0 1.1E-37 2.4E-42 300.0 22.2 246 83-360 26-271 (373)
55 PRK08637 hypothetical protein; 100.0 1E-36 2.2E-41 294.8 27.3 263 84-358 4-284 (388)
56 PRK08175 aminotransferase; Val 100.0 5.5E-37 1.2E-41 297.4 25.1 259 83-362 29-288 (395)
57 TIGR01265 tyr_nico_aTase tyros 100.0 1.5E-36 3.4E-41 295.0 27.9 275 70-358 16-294 (403)
58 PRK09265 aminotransferase AlaT 100.0 1.7E-36 3.7E-41 294.9 27.2 261 82-359 32-293 (404)
59 TIGR03537 DapC succinyldiamino 100.0 1.4E-36 3.1E-41 289.9 25.5 247 85-357 2-252 (350)
60 PRK08363 alanine aminotransfer 100.0 1.9E-36 4.2E-41 293.9 26.1 263 83-362 30-293 (398)
61 PRK07568 aspartate aminotransf 100.0 1.3E-36 2.9E-41 294.9 25.0 256 83-362 30-286 (397)
62 PRK05764 aspartate aminotransf 100.0 1.7E-36 3.7E-41 293.8 25.2 281 59-361 5-288 (393)
63 KOG0256 1-aminocyclopropane-1- 100.0 6E-37 1.3E-41 280.5 18.8 229 119-362 114-352 (471)
64 PRK02610 histidinol-phosphate 100.0 3.1E-36 6.7E-41 290.1 24.3 251 83-362 28-283 (374)
65 KOG0259 Tyrosine aminotransfer 100.0 4.7E-36 1E-40 272.4 23.7 261 84-358 62-325 (447)
66 PF00155 Aminotran_1_2: Aminot 100.0 1.7E-36 3.6E-41 290.6 21.6 262 84-360 2-268 (363)
67 PRK07865 N-succinyldiaminopime 100.0 4.9E-36 1.1E-40 287.7 23.0 262 59-358 4-270 (364)
68 PRK01533 histidinol-phosphate 100.0 3.8E-36 8.3E-41 288.3 20.6 242 83-362 29-270 (366)
69 PRK09275 aspartate aminotransf 100.0 3.2E-36 6.9E-41 296.8 20.5 245 84-351 101-388 (527)
70 TIGR03542 DAPAT_plant LL-diami 100.0 1.6E-35 3.4E-40 287.9 24.1 252 81-358 31-301 (402)
71 PRK06358 threonine-phosphate d 100.0 7.5E-35 1.6E-39 278.4 25.9 253 70-358 7-259 (354)
72 PRK15481 transcriptional regul 100.0 1.5E-35 3.3E-40 290.5 21.1 243 84-359 86-329 (431)
73 PRK03317 histidinol-phosphate 100.0 4E-35 8.7E-40 281.8 22.3 247 84-360 27-275 (368)
74 PRK14809 histidinol-phosphate 100.0 1.3E-34 2.8E-39 277.2 25.6 250 70-358 18-267 (357)
75 COG1168 MalY Bifunctional PLP- 100.0 1.5E-34 3.2E-39 264.4 24.0 262 81-363 23-286 (388)
76 TIGR03801 asp_4_decarbox aspar 100.0 4.2E-35 9.2E-40 288.5 20.9 256 84-362 95-403 (521)
77 PRK09440 avtA valine--pyruvate 100.0 2.3E-34 5E-39 281.0 23.7 260 76-360 23-297 (416)
78 PRK06836 aspartate aminotransf 100.0 6.2E-34 1.3E-38 276.0 26.5 255 83-358 33-298 (394)
79 TIGR03539 DapC_actino succinyl 100.0 1.9E-34 4E-39 276.1 21.9 239 83-358 21-264 (357)
80 PRK03158 histidinol-phosphate 100.0 2.9E-34 6.4E-39 274.9 22.8 238 84-358 30-267 (359)
81 PRK05166 histidinol-phosphate 100.0 7.4E-34 1.6E-38 273.3 24.2 241 83-358 36-277 (371)
82 PRK08056 threonine-phosphate d 100.0 2.1E-33 4.6E-38 268.7 25.6 255 66-358 4-258 (356)
83 PRK07392 threonine-phosphate d 100.0 2.2E-33 4.9E-38 268.9 24.6 236 84-358 23-261 (360)
84 PLN03026 histidinol-phosphate 100.0 3E-33 6.4E-38 269.8 25.2 234 83-358 52-285 (380)
85 PRK05387 histidinol-phosphate 100.0 1.5E-33 3.3E-38 269.3 22.2 234 83-358 24-258 (353)
86 PRK09105 putative aminotransfe 100.0 2.3E-33 4.9E-38 269.6 22.2 235 83-358 43-277 (370)
87 PRK03967 histidinol-phosphate 100.0 3.8E-33 8.2E-38 265.0 22.8 232 84-359 19-250 (337)
88 PRK08153 histidinol-phosphate 100.0 2.9E-33 6.4E-38 268.9 22.0 240 80-358 29-268 (369)
89 PRK04870 histidinol-phosphate 100.0 5.8E-33 1.3E-37 265.7 22.8 237 83-358 26-262 (356)
90 COG0079 HisC Histidinol-phosph 100.0 8.7E-33 1.9E-37 261.9 23.4 236 84-359 23-258 (356)
91 PRK06225 aspartate aminotransf 100.0 2.6E-32 5.7E-37 263.4 24.2 247 83-362 28-275 (380)
92 PLN02672 methionine S-methyltr 100.0 1.6E-32 3.5E-37 285.8 23.4 232 83-336 697-936 (1082)
93 PRK14807 histidinol-phosphate 100.0 6.7E-32 1.5E-36 257.8 25.1 237 83-358 22-258 (351)
94 PRK14808 histidinol-phosphate 100.0 3.5E-32 7.5E-37 258.0 22.9 229 83-358 19-247 (335)
95 PRK03321 putative aminotransfe 100.0 1.5E-32 3.2E-37 262.5 19.5 243 84-362 23-265 (352)
96 KOG0634 Aromatic amino acid am 100.0 1E-31 2.2E-36 248.1 20.7 225 119-358 93-341 (472)
97 PRK08354 putative aminotransfe 100.0 1.5E-31 3.2E-36 251.3 22.1 215 84-357 9-223 (311)
98 PRK04781 histidinol-phosphate 100.0 1.7E-31 3.7E-36 256.2 21.6 211 120-359 54-266 (364)
99 PRK05664 threonine-phosphate d 100.0 3.9E-31 8.3E-36 250.5 23.2 217 84-358 21-237 (330)
100 PRK01688 histidinol-phosphate 100.0 1.2E-31 2.6E-36 256.1 18.9 206 120-358 52-258 (351)
101 PRK06959 putative threonine-ph 100.0 5E-31 1.1E-35 250.5 22.3 237 65-358 7-243 (339)
102 PRK02731 histidinol-phosphate 100.0 1.2E-30 2.7E-35 250.5 23.5 239 83-358 32-270 (367)
103 PRK06425 histidinol-phosphate 100.0 1.5E-30 3.4E-35 246.6 22.8 197 120-351 35-231 (332)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.5E-30 5.3E-35 245.0 21.8 239 67-359 2-240 (330)
105 PRK04635 histidinol-phosphate 100.0 1.5E-30 3.2E-35 248.9 19.5 227 84-358 32-259 (354)
106 TIGR01141 hisC histidinol-phos 100.0 3E-30 6.4E-35 245.9 21.1 238 83-359 19-256 (346)
107 PRK07908 hypothetical protein; 100.0 1E-29 2.2E-34 242.7 23.4 232 78-357 17-248 (349)
108 PRK00950 histidinol-phosphate 100.0 1.3E-29 2.9E-34 242.8 24.3 247 70-358 22-268 (361)
109 PRK13238 tnaA tryptophanase/L- 99.9 3.6E-25 7.8E-30 217.3 24.4 268 64-358 15-311 (460)
110 cd00609 AAT_like Aspartate ami 99.9 2.7E-25 5.9E-30 210.9 22.8 251 86-359 1-253 (350)
111 KOG0258 Alanine aminotransfera 99.9 5.3E-24 1.2E-28 194.4 20.8 247 102-357 88-345 (475)
112 PRK07049 methionine gamma-lyas 99.9 1.6E-22 3.4E-27 197.3 23.4 199 124-358 81-289 (427)
113 COG3977 Alanine-alpha-ketoisov 99.9 1.5E-22 3.4E-27 179.2 18.2 264 70-360 16-297 (417)
114 KOG0633 Histidinol phosphate a 99.9 1.6E-23 3.4E-28 182.1 10.2 189 145-357 82-271 (375)
115 cd00617 Tnase_like Tryptophana 99.9 2.1E-21 4.6E-26 188.4 22.4 222 84-329 12-256 (431)
116 PLN02242 methionine gamma-lyas 99.9 2E-20 4.3E-25 181.9 19.8 189 124-355 74-270 (418)
117 TIGR01822 2am3keto_CoA 2-amino 99.9 6.1E-20 1.3E-24 178.0 23.2 210 83-327 38-258 (393)
118 TIGR00858 bioF 8-amino-7-oxono 99.9 6.6E-20 1.4E-24 175.2 23.0 234 84-356 17-261 (360)
119 PRK06234 methionine gamma-lyas 99.9 7.8E-20 1.7E-24 177.3 23.4 193 124-357 62-261 (400)
120 cd06502 TA_like Low-specificit 99.9 3.3E-20 7.1E-25 176.0 19.6 225 102-358 10-243 (338)
121 TIGR01825 gly_Cac_T_rel pyrido 99.9 9.2E-20 2E-24 176.2 22.5 242 83-358 33-279 (385)
122 PRK06939 2-amino-3-ketobutyrat 99.9 8.9E-20 1.9E-24 176.8 21.7 218 83-335 42-266 (397)
123 PRK10534 L-threonine aldolase; 99.8 2E-20 4.2E-25 177.4 16.3 233 86-357 2-243 (333)
124 PLN02721 threonine aldolase 99.8 9.1E-20 2E-24 174.0 20.9 210 84-325 6-224 (353)
125 TIGR02080 O_succ_thio_ly O-suc 99.8 3E-19 6.6E-24 172.0 21.7 192 124-357 49-245 (382)
126 PRK02627 acetylornithine amino 99.8 1.8E-19 3.9E-24 174.9 19.6 244 84-358 40-297 (396)
127 PRK08045 cystathionine gamma-s 99.8 3.5E-19 7.5E-24 171.7 21.3 193 124-358 50-247 (386)
128 PRK08133 O-succinylhomoserine 99.8 4E-19 8.6E-24 171.8 21.6 190 125-356 60-253 (390)
129 TIGR00707 argD acetylornithine 99.8 4.3E-19 9.2E-24 171.2 21.4 243 84-357 28-284 (379)
130 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 3.6E-19 7.8E-24 170.7 20.7 172 127-327 45-220 (361)
131 TIGR03576 pyridox_MJ0158 pyrid 99.8 4.5E-19 9.8E-24 168.6 21.1 193 126-358 54-249 (346)
132 TIGR03392 FeS_syn_CsdA cystein 99.8 4.2E-19 9.2E-24 172.4 21.3 205 84-324 16-234 (398)
133 PRK08249 cystathionine gamma-s 99.8 4.6E-19 9.9E-24 171.6 21.2 194 123-358 61-258 (398)
134 PF12897 Aminotran_MocR: Alani 99.8 3.3E-19 7.1E-24 164.3 17.9 220 119-359 61-301 (425)
135 PRK10874 cysteine sulfinate de 99.8 8.1E-19 1.8E-23 170.6 20.9 205 84-324 19-237 (401)
136 PRK05958 8-amino-7-oxononanoat 99.8 2.2E-18 4.9E-23 166.3 23.4 238 83-357 39-284 (385)
137 PRK08776 cystathionine gamma-s 99.8 9.6E-19 2.1E-23 169.6 20.6 192 125-358 59-255 (405)
138 PRK07504 O-succinylhomoserine 99.8 1.1E-18 2.4E-23 169.0 20.1 193 124-357 63-259 (398)
139 PRK07811 cystathionine gamma-s 99.8 1.7E-18 3.6E-23 167.3 20.4 193 124-358 59-256 (388)
140 PRK08247 cystathionine gamma-s 99.8 2.8E-18 6.1E-23 164.7 21.8 191 124-357 50-245 (366)
141 PLN02822 serine palmitoyltrans 99.8 1.9E-18 4.1E-23 171.1 19.7 238 83-359 109-363 (481)
142 PRK07503 methionine gamma-lyas 99.8 4.5E-18 9.7E-23 165.1 21.2 194 124-358 63-261 (403)
143 PRK07050 cystathionine beta-ly 99.8 6.9E-18 1.5E-22 163.2 22.2 192 124-357 63-259 (394)
144 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.4E-17 2.9E-22 160.3 23.9 176 128-336 53-232 (370)
145 PRK06460 hypothetical protein; 99.8 4.1E-18 8.8E-23 164.0 20.2 189 124-355 43-236 (376)
146 PRK02948 cysteine desulfurase; 99.8 1.5E-18 3.3E-23 167.6 17.1 234 94-358 4-250 (381)
147 PRK08861 cystathionine gamma-s 99.8 7.2E-18 1.6E-22 162.3 21.0 193 124-358 51-248 (388)
148 TIGR01328 met_gam_lyase methio 99.8 6.1E-18 1.3E-22 163.5 20.4 194 124-357 57-254 (391)
149 cd00378 SHMT Serine-glycine hy 99.8 4.5E-18 9.8E-23 165.4 19.7 217 84-337 20-249 (402)
150 PRK07582 cystathionine gamma-l 99.8 4.7E-18 1E-22 163.0 19.3 190 123-358 48-242 (366)
151 cd06454 KBL_like KBL_like; thi 99.8 1E-17 2.2E-22 159.6 21.5 209 85-328 3-220 (349)
152 PRK08574 cystathionine gamma-s 99.8 1.3E-17 2.9E-22 160.8 21.2 192 124-357 51-246 (385)
153 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.2E-18 4.8E-23 168.1 15.9 160 124-321 55-218 (418)
154 PRK09295 bifunctional cysteine 99.8 9.6E-18 2.1E-22 163.4 20.3 205 84-324 23-241 (406)
155 PLN02483 serine palmitoyltrans 99.8 2E-17 4.4E-22 164.1 22.9 220 83-337 100-334 (489)
156 PRK07810 O-succinylhomoserine 99.8 9.3E-18 2E-22 162.7 19.6 193 124-358 68-265 (403)
157 cd00614 CGS_like CGS_like: Cys 99.8 2.1E-17 4.6E-22 158.9 21.9 192 124-357 38-234 (369)
158 TIGR00713 hemL glutamate-1-sem 99.8 1.4E-17 3E-22 163.1 20.7 246 84-358 49-312 (423)
159 cd00610 OAT_like Acetyl ornith 99.8 1.2E-17 2.6E-22 162.9 19.8 251 84-357 37-307 (413)
160 PRK06767 methionine gamma-lyas 99.8 2E-17 4.3E-22 159.9 20.9 192 124-357 59-255 (386)
161 PRK01278 argD acetylornithine 99.8 1.7E-17 3.8E-22 160.6 19.5 243 84-357 32-289 (389)
162 TIGR01325 O_suc_HS_sulf O-succ 99.8 3.3E-17 7.1E-22 158.0 20.9 192 124-357 52-247 (380)
163 PRK13392 5-aminolevulinate syn 99.8 3.1E-17 6.6E-22 160.0 20.9 239 84-359 47-295 (410)
164 PRK03244 argD acetylornithine 99.8 2.6E-17 5.5E-22 160.0 20.1 237 84-357 44-297 (398)
165 TIGR01976 am_tr_V_VC1184 cyste 99.8 3.4E-17 7.4E-22 159.0 20.0 197 97-324 24-232 (397)
166 cd00613 GDC-P Glycine cleavage 99.8 3.3E-17 7.2E-22 159.0 19.8 206 84-324 21-241 (398)
167 PLN02409 serine--glyoxylate am 99.8 4.3E-17 9.4E-22 158.4 20.4 203 98-328 16-221 (401)
168 TIGR01979 sufS cysteine desulf 99.8 4.9E-17 1.1E-21 158.2 20.7 205 84-324 18-236 (403)
169 cd06453 SufS_like Cysteine des 99.8 5.2E-17 1.1E-21 156.3 20.5 199 94-324 3-216 (373)
170 PRK07179 hypothetical protein; 99.8 1.8E-16 3.9E-21 154.5 24.2 216 84-336 55-273 (407)
171 PLN02855 Bifunctional selenocy 99.8 5.2E-17 1.1E-21 159.1 19.6 205 84-324 32-250 (424)
172 PRK13479 2-aminoethylphosphona 99.8 1.4E-16 3.1E-21 153.1 21.5 198 98-327 12-212 (368)
173 TIGR02379 ECA_wecE TDP-4-keto- 99.7 1.5E-16 3.2E-21 153.1 21.0 191 102-331 9-205 (376)
174 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 2.1E-16 4.6E-21 152.9 22.2 211 84-328 19-240 (387)
175 TIGR01437 selA_rel uncharacter 99.7 2.9E-16 6.2E-21 150.6 22.2 198 84-325 9-225 (363)
176 cd00615 Orn_deC_like Ornithine 99.7 6.2E-17 1.4E-21 150.9 17.1 169 124-316 57-230 (294)
177 PRK05939 hypothetical protein; 99.7 3.7E-16 7.9E-21 151.2 23.0 151 129-316 50-204 (397)
178 PRK09028 cystathionine beta-ly 99.7 1.9E-16 4.2E-21 152.4 20.7 196 120-358 53-255 (394)
179 cd06451 AGAT_like Alanine-glyo 99.7 2.1E-16 4.5E-21 151.2 20.1 196 98-327 6-205 (356)
180 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 3.5E-16 7.6E-21 149.2 21.5 199 98-328 6-207 (355)
181 TIGR03403 nifS_epsilon cystein 99.7 9.1E-17 2E-21 155.2 16.9 199 93-316 2-212 (382)
182 PRK11658 UDP-4-amino-4-deoxy-L 99.7 3.6E-16 7.8E-21 150.8 20.8 190 103-330 13-204 (379)
183 PRK08248 O-acetylhomoserine am 99.7 4.3E-16 9.2E-21 152.2 21.5 157 125-317 63-223 (431)
184 PRK07671 cystathionine beta-ly 99.7 8.1E-16 1.8E-20 148.0 22.0 190 124-356 48-242 (377)
185 cd06450 DOPA_deC_like DOPA dec 99.7 1.1E-16 2.5E-21 152.2 15.5 201 103-316 12-227 (345)
186 PRK06702 O-acetylhomoserine am 99.7 4.4E-16 9.4E-21 151.3 19.7 197 125-358 60-288 (432)
187 PRK09064 5-aminolevulinate syn 99.7 1.8E-15 3.9E-20 147.4 23.3 241 83-360 46-296 (407)
188 TIGR01329 cysta_beta_ly_E cyst 99.7 1.1E-15 2.4E-20 147.2 21.4 195 120-357 39-240 (378)
189 PRK07269 cystathionine gamma-s 99.7 5.6E-16 1.2E-20 148.3 19.2 194 124-358 52-246 (364)
190 PRK08064 cystathionine beta-ly 99.7 1.1E-15 2.4E-20 147.9 21.1 189 126-357 54-247 (390)
191 TIGR01821 5aminolev_synth 5-am 99.7 1.4E-15 3E-20 148.0 21.5 238 84-358 46-293 (402)
192 cd01494 AAT_I Aspartate aminot 99.7 6.1E-16 1.3E-20 131.2 16.1 164 129-316 3-167 (170)
193 PRK06084 O-acetylhomoserine am 99.7 1.5E-15 3.3E-20 148.1 20.9 156 125-316 57-216 (425)
194 PRK02936 argD acetylornithine 99.7 2.1E-15 4.5E-20 145.5 21.5 246 84-358 30-282 (377)
195 TIGR01977 am_tr_V_EF2568 cyste 99.7 2.1E-15 4.5E-20 145.3 21.1 187 102-316 12-210 (376)
196 PRK14012 cysteine desulfurase; 99.7 1.5E-15 3.2E-20 148.0 18.7 201 93-323 6-221 (404)
197 PRK06176 cystathionine gamma-s 99.7 2.5E-15 5.4E-20 144.8 20.0 189 125-356 49-242 (380)
198 PRK04073 rocD ornithine--oxo-a 99.7 5.6E-15 1.2E-19 143.5 21.7 239 84-358 41-302 (396)
199 PRK08088 4-aminobutyrate amino 99.7 3.2E-15 7E-20 146.4 19.7 251 84-359 42-315 (425)
200 TIGR02326 transamin_PhnW 2-ami 99.7 6.7E-15 1.5E-19 141.2 21.4 195 98-326 10-209 (363)
201 PRK07505 hypothetical protein; 99.7 8.6E-15 1.9E-19 142.5 22.4 236 84-357 47-297 (402)
202 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 2.9E-15 6.2E-20 144.4 18.5 169 130-329 31-202 (375)
203 PLN02509 cystathionine beta-ly 99.7 5.5E-15 1.2E-19 144.9 20.6 197 120-357 125-326 (464)
204 TIGR01324 cysta_beta_ly_B cyst 99.7 7.3E-15 1.6E-19 141.2 21.0 187 128-357 52-243 (377)
205 TIGR03235 DNA_S_dndA cysteine 99.7 4E-15 8.6E-20 142.3 19.0 197 95-321 3-213 (353)
206 PRK05093 argD bifunctional N-s 99.7 7E-15 1.5E-19 143.1 20.7 236 84-357 41-298 (403)
207 PRK05968 hypothetical protein; 99.7 1E-14 2.2E-19 141.1 20.9 191 125-358 62-257 (389)
208 PRK13393 5-aminolevulinate syn 99.7 2.3E-14 5.1E-19 139.6 23.2 238 84-358 46-293 (406)
209 TIGR02006 IscS cysteine desulf 99.7 3.2E-15 6.9E-20 145.5 16.5 197 95-321 8-217 (402)
210 PRK13520 L-tyrosine decarboxyl 99.7 3.1E-14 6.7E-19 136.8 23.2 202 101-324 31-237 (371)
211 PRK00011 glyA serine hydroxyme 99.6 1.7E-14 3.7E-19 141.0 20.5 213 83-337 25-253 (416)
212 PRK00451 glycine dehydrogenase 99.6 1.1E-14 2.3E-19 143.7 19.1 200 84-324 69-285 (447)
213 PRK05967 cystathionine beta-ly 99.6 3E-14 6.6E-19 137.0 21.5 186 130-358 68-258 (395)
214 PLN03227 serine palmitoyltrans 99.6 2.7E-14 5.8E-19 138.3 21.2 235 87-353 2-251 (392)
215 TIGR03402 FeS_nifS cysteine de 99.6 2.9E-14 6.2E-19 137.6 19.6 194 93-316 2-208 (379)
216 TIGR03531 selenium_SpcS O-phos 99.6 2.8E-14 6E-19 138.7 19.3 189 151-360 125-320 (444)
217 PRK15407 lipopolysaccharide bi 99.6 6.1E-14 1.3E-18 137.4 21.7 169 128-328 65-241 (438)
218 TIGR03588 PseC UDP-4-keto-6-de 99.6 7.5E-14 1.6E-18 134.9 21.7 193 103-329 9-206 (380)
219 PRK12381 bifunctional succinyl 99.6 5.7E-14 1.2E-18 136.8 20.8 242 84-357 40-297 (406)
220 PRK04260 acetylornithine amino 99.6 9.8E-14 2.1E-18 133.8 21.4 240 84-358 30-280 (375)
221 PRK00854 rocD ornithine--oxo-a 99.6 1.1E-13 2.3E-18 134.8 21.8 239 84-358 42-303 (401)
222 PLN02651 cysteine desulfurase 99.6 9.1E-14 2E-18 133.5 19.6 199 93-321 2-213 (364)
223 PTZ00125 ornithine aminotransf 99.6 2.3E-13 5E-18 132.3 22.2 246 84-357 32-293 (400)
224 TIGR03812 tyr_de_CO2_Arch tyro 99.6 2.3E-13 4.9E-18 130.9 22.0 175 129-324 62-242 (373)
225 PRK05994 O-acetylhomoserine am 99.6 8.8E-14 1.9E-18 136.0 18.3 155 127-317 64-222 (427)
226 cd00616 AHBA_syn 3-amino-5-hyd 99.5 9.2E-13 2E-17 125.6 21.1 173 122-329 14-189 (352)
227 PRK00062 glutamate-1-semialdeh 99.5 5.5E-13 1.2E-17 130.6 19.6 246 83-357 50-313 (426)
228 COG0520 csdA Selenocysteine ly 99.5 1.1E-12 2.5E-17 126.7 20.9 196 99-324 31-240 (405)
229 PRK04366 glycine dehydrogenase 99.5 9.6E-13 2.1E-17 130.7 20.7 204 87-316 72-287 (481)
230 PRK08360 4-aminobutyrate amino 99.5 2E-12 4.3E-17 127.0 22.4 256 79-358 38-319 (443)
231 PRK08134 O-acetylhomoserine am 99.5 2.6E-12 5.7E-17 125.6 22.3 156 126-317 64-223 (433)
232 PRK09792 4-aminobutyrate trans 99.5 2.8E-12 6.1E-17 125.4 21.7 188 150-355 102-310 (421)
233 COG1104 NifS Cysteine sulfinat 99.5 7.2E-13 1.6E-17 124.4 16.6 195 93-317 4-214 (386)
234 PRK04612 argD acetylornithine 99.5 3E-12 6.6E-17 124.5 21.3 252 78-358 36-302 (408)
235 PRK05937 8-amino-7-oxononanoat 99.5 2.9E-12 6.3E-17 123.4 20.8 203 84-311 5-219 (370)
236 PLN00144 acetylornithine trans 99.5 1.8E-12 3.9E-17 125.2 19.3 236 84-355 16-279 (382)
237 TIGR03246 arg_catab_astC succi 99.5 4.2E-12 9E-17 123.4 21.2 236 84-357 36-293 (397)
238 TIGR01885 Orn_aminotrans ornit 99.5 7.9E-12 1.7E-16 121.7 22.9 243 84-359 38-303 (401)
239 PRK07812 O-acetylhomoserine am 99.5 9.6E-12 2.1E-16 121.6 23.1 162 121-317 62-229 (436)
240 PLN02624 ornithine-delta-amino 99.5 8E-12 1.7E-16 123.9 22.7 243 84-359 76-341 (474)
241 PRK08114 cystathionine beta-ly 99.5 8E-12 1.7E-16 120.3 21.3 190 125-357 61-257 (395)
242 KOG1549 Cysteine desulfurase N 99.5 3.1E-12 6.7E-17 120.7 17.7 202 83-319 42-256 (428)
243 COG0399 WecE Predicted pyridox 99.5 4.8E-12 1E-16 119.7 19.1 191 102-329 13-205 (374)
244 TIGR00700 GABAtrnsam 4-aminobu 99.5 8.1E-12 1.8E-16 122.2 21.1 255 78-357 29-311 (420)
245 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 6.9E-12 1.5E-16 120.4 20.0 196 120-357 47-251 (386)
246 PRK06777 4-aminobutyrate amino 99.4 1.3E-11 2.8E-16 120.7 21.6 253 79-357 37-312 (421)
247 PF01041 DegT_DnrJ_EryC1: DegT 99.4 6.2E-12 1.3E-16 120.7 18.3 189 105-329 6-196 (363)
248 TIGR02618 tyr_phenol_ly tyrosi 99.4 1.7E-11 3.6E-16 118.2 20.9 207 104-332 50-277 (450)
249 PRK06918 4-aminobutyrate amino 99.4 1.4E-11 3.1E-16 121.5 20.8 255 79-357 51-333 (451)
250 PRK05613 O-acetylhomoserine am 99.4 2.4E-11 5.1E-16 118.9 21.9 162 120-316 61-228 (437)
251 PLN02955 8-amino-7-oxononanoat 99.4 5.5E-11 1.2E-15 116.0 23.3 223 84-338 103-343 (476)
252 PRK04311 selenocysteine syntha 99.4 5.9E-11 1.3E-15 116.6 22.7 231 71-330 64-314 (464)
253 PF01212 Beta_elim_lyase: Beta 99.4 1.5E-11 3.3E-16 113.7 15.3 208 103-336 8-222 (290)
254 PF06838 Met_gamma_lyase: Meth 99.4 4.9E-11 1.1E-15 110.0 18.1 183 125-334 53-250 (403)
255 PRK06434 cystathionine gamma-l 99.4 4.6E-11 9.9E-16 115.0 18.8 189 125-358 63-256 (384)
256 COG0626 MetC Cystathionine bet 99.4 1E-10 2.3E-15 111.4 20.7 193 125-357 62-259 (396)
257 PF00266 Aminotran_5: Aminotra 99.4 5.8E-11 1.3E-15 114.3 18.8 199 95-324 4-216 (371)
258 PRK07495 4-aminobutyrate amino 99.3 5.1E-11 1.1E-15 116.5 17.7 252 78-356 36-311 (425)
259 TIGR00474 selA seryl-tRNA(sec) 99.3 1.9E-10 4.2E-15 112.7 21.2 215 84-326 75-305 (454)
260 COG0156 BioF 7-keto-8-aminopel 99.3 5.7E-10 1.2E-14 106.4 21.0 221 83-334 39-266 (388)
261 PRK08117 4-aminobutyrate amino 99.3 5.9E-10 1.3E-14 109.6 21.6 249 84-357 44-321 (433)
262 PLN02994 1-aminocyclopropane-1 99.3 1.4E-11 3E-16 102.9 8.5 118 62-189 16-153 (153)
263 TIGR01814 kynureninase kynuren 99.3 3.5E-10 7.6E-15 110.3 19.7 144 148-310 85-240 (406)
264 PRK13237 tyrosine phenol-lyase 99.3 5.6E-10 1.2E-14 108.0 20.6 189 120-328 72-280 (460)
265 COG2873 MET17 O-acetylhomoseri 99.3 3.3E-10 7.1E-15 104.4 17.3 186 100-321 34-225 (426)
266 KOG0053 Cystathionine beta-lya 99.3 8E-10 1.7E-14 104.3 19.8 193 125-358 76-272 (409)
267 PRK06058 4-aminobutyrate amino 99.2 1.1E-09 2.5E-14 107.7 21.7 255 78-358 52-334 (443)
268 COG2008 GLY1 Threonine aldolas 99.2 2.8E-10 6.2E-15 104.9 16.1 207 101-334 11-225 (342)
269 PF01276 OKR_DC_1: Orn/Lys/Arg 99.2 6.9E-11 1.5E-15 113.4 11.9 192 125-336 64-271 (417)
270 PRK05964 adenosylmethionine--8 99.2 1.8E-09 3.8E-14 105.9 20.0 253 79-357 39-321 (423)
271 COG0075 Serine-pyruvate aminot 99.2 4.2E-09 9E-14 99.8 20.0 198 98-329 12-214 (383)
272 PRK02769 histidine decarboxyla 99.2 1.9E-09 4.1E-14 103.8 17.9 175 130-322 69-246 (380)
273 TIGR00709 dat 2,4-diaminobutyr 99.1 1E-08 2.2E-13 101.0 22.4 255 79-358 36-320 (442)
274 PRK13034 serine hydroxymethylt 99.1 9.2E-09 2E-13 100.5 21.0 218 69-324 15-247 (416)
275 TIGR01788 Glu-decarb-GAD gluta 99.1 6.5E-09 1.4E-13 101.6 19.4 203 102-323 53-277 (431)
276 KOG1368 Threonine aldolase [Am 99.1 3E-09 6.6E-14 95.2 14.5 202 98-325 30-241 (384)
277 PRK08593 4-aminobutyrate amino 99.1 3.5E-08 7.6E-13 97.2 22.9 249 84-356 43-320 (445)
278 PLN03032 serine decarboxylase; 99.1 5.5E-09 1.2E-13 100.1 16.6 174 129-322 69-249 (374)
279 TIGR02407 ectoine_ectB diamino 99.1 2.3E-08 4.9E-13 97.7 21.1 222 84-321 36-278 (412)
280 PF04864 Alliinase_C: Allinase 99.0 1.2E-09 2.7E-14 100.2 10.5 193 128-357 45-241 (363)
281 PRK06541 hypothetical protein; 99.0 4.1E-08 8.9E-13 97.0 21.9 223 79-324 49-307 (460)
282 PRK09264 diaminobutyrate--2-ox 99.0 7.5E-08 1.6E-12 94.4 23.0 158 157-324 109-284 (425)
283 PRK15029 arginine decarboxylas 99.0 1.4E-08 2.9E-13 104.6 17.5 194 125-336 203-418 (755)
284 PRK03715 argD acetylornithine 99.0 5.9E-08 1.3E-12 94.2 20.6 216 84-324 37-264 (395)
285 PLN02482 glutamate-1-semialdeh 98.9 1.9E-07 4E-12 92.5 21.7 210 84-324 100-330 (474)
286 COG0076 GadB Glutamate decarbo 98.9 1.3E-07 2.8E-12 92.9 20.4 210 99-324 71-293 (460)
287 cd00611 PSAT_like Phosphoserin 98.9 4.2E-08 9.1E-13 94.0 15.8 190 98-327 6-211 (355)
288 PLN02263 serine decarboxylase 98.9 3.3E-08 7.2E-13 96.5 15.2 182 127-322 130-316 (470)
289 PTZ00094 serine hydroxymethylt 98.9 1.2E-07 2.6E-12 93.8 19.0 212 70-316 22-255 (452)
290 PLN02414 glycine dehydrogenase 98.9 1.3E-07 2.8E-12 100.1 20.1 162 129-316 571-745 (993)
291 PRK05769 4-aminobutyrate amino 98.9 3E-07 6.5E-12 90.5 21.1 256 79-358 51-335 (441)
292 TIGR03372 putres_am_tran putre 98.9 3.5E-07 7.5E-12 89.9 20.5 213 84-324 76-310 (442)
293 PRK12389 glutamate-1-semialdeh 98.9 6.7E-07 1.5E-11 87.8 22.5 217 84-324 54-284 (428)
294 PRK00615 glutamate-1-semialdeh 98.8 6.1E-07 1.3E-11 88.0 21.7 222 79-324 50-285 (433)
295 PRK13580 serine hydroxymethylt 98.8 2.5E-07 5.4E-12 90.8 18.6 229 84-347 50-320 (493)
296 KOG2862 Alanine-glyoxylate ami 98.8 1.4E-07 2.9E-12 85.3 15.0 150 157-329 74-226 (385)
297 PLN02724 Molybdenum cofactor s 98.8 2.3E-07 4.9E-12 97.9 18.5 171 128-321 80-276 (805)
298 COG4100 Cystathionine beta-lya 98.8 2.1E-07 4.6E-12 83.6 14.9 169 124-316 63-246 (416)
299 COG1103 Archaea-specific pyrid 98.8 4.3E-07 9.4E-12 80.6 15.7 176 128-332 63-242 (382)
300 PRK04013 argD acetylornithine/ 98.8 1E-06 2.2E-11 84.5 19.6 204 84-321 25-244 (364)
301 PLN02590 probable tyrosine dec 98.7 2.5E-06 5.4E-11 85.4 21.9 208 103-324 144-372 (539)
302 PRK15400 lysine decarboxylase 98.7 3.3E-07 7.2E-12 93.6 15.7 173 124-316 192-377 (714)
303 TIGR01364 serC_1 phosphoserine 98.7 1.2E-06 2.6E-11 83.7 17.8 160 129-328 40-204 (349)
304 PRK11522 putrescine--2-oxoglut 98.7 1.8E-06 4E-11 85.3 19.4 220 84-324 83-317 (459)
305 PRK05639 4-aminobutyrate amino 98.7 5E-06 1.1E-10 82.2 22.1 225 78-324 49-307 (457)
306 COG4992 ArgD Ornithine/acetylo 98.7 2.8E-06 6.2E-11 80.3 19.3 237 83-356 42-297 (404)
307 PRK05355 3-phosphoserine/phosp 98.7 1.1E-06 2.4E-11 84.3 16.9 191 98-326 10-213 (360)
308 TIGR02617 tnaA_trp_ase tryptop 98.7 4.5E-06 9.8E-11 80.4 20.7 238 84-357 42-319 (467)
309 TIGR03799 NOD_PanD_pyr putativ 98.7 4.1E-06 8.9E-11 83.8 21.3 192 120-324 119-350 (522)
310 PF00282 Pyridoxal_deC: Pyrido 98.7 1.2E-06 2.7E-11 84.2 17.0 208 103-324 53-279 (373)
311 PLN02880 tyrosine decarboxylas 98.6 5.4E-06 1.2E-10 82.6 21.5 192 120-324 112-324 (490)
312 PLN03226 serine hydroxymethylt 98.6 6.6E-06 1.4E-10 81.6 21.9 203 84-321 35-259 (475)
313 PRK03080 phosphoserine aminotr 98.6 4.1E-07 8.8E-12 87.9 12.9 185 100-328 21-214 (378)
314 PLN02271 serine hydroxymethylt 98.6 6.8E-06 1.5E-10 81.4 21.4 205 84-316 149-371 (586)
315 PRK07482 hypothetical protein; 98.6 9.2E-06 2E-10 80.5 22.7 227 78-324 46-306 (461)
316 COG0160 GabT 4-aminobutyrate a 98.6 4.9E-06 1.1E-10 80.7 20.0 254 78-357 52-335 (447)
317 PRK06062 hypothetical protein; 98.6 9E-06 2E-10 80.3 21.6 224 78-324 49-300 (451)
318 PRK15399 lysine decarboxylase 98.6 4.6E-06 1E-10 85.3 19.5 191 124-336 192-396 (713)
319 PRK12403 putative aminotransfe 98.6 9.5E-06 2.1E-10 80.3 21.3 225 78-324 50-308 (460)
320 PRK06082 4-aminobutyrate amino 98.6 1.9E-05 4E-10 78.2 23.1 218 84-324 73-314 (459)
321 PRK05965 hypothetical protein; 98.6 1.7E-05 3.7E-10 78.5 22.7 224 78-324 42-301 (459)
322 PRK07986 adenosylmethionine--8 98.6 4.8E-06 1E-10 81.7 18.3 221 84-324 44-291 (428)
323 COG1982 LdcC Arginine/lysine/o 98.5 3.5E-06 7.6E-11 83.1 16.3 187 125-336 68-263 (557)
324 PRK07046 aminotransferase; Val 98.5 2.5E-05 5.5E-10 77.2 22.6 211 78-324 71-301 (453)
325 PRK06209 glutamate-1-semialdeh 98.5 6.9E-06 1.5E-10 80.7 18.5 213 79-324 45-267 (431)
326 COG0001 HemL Glutamate-1-semia 98.5 1.2E-05 2.6E-10 76.9 19.2 219 78-334 49-290 (432)
327 TIGR00461 gcvP glycine dehydro 98.5 1.1E-05 2.3E-10 85.0 20.4 177 120-316 517-707 (939)
328 PRK13578 ornithine decarboxyla 98.5 6.2E-06 1.4E-10 84.5 18.2 174 124-316 171-365 (720)
329 TIGR00508 bioA adenosylmethion 98.5 2E-05 4.3E-10 77.4 21.2 218 84-324 46-294 (427)
330 PRK06943 adenosylmethionine--8 98.5 2.2E-05 4.8E-10 77.6 21.6 219 84-324 55-308 (453)
331 PRK07030 adenosylmethionine--8 98.5 3E-05 6.4E-10 76.9 22.3 218 84-324 48-301 (466)
332 PRK07678 aminotransferase; Val 98.5 3.3E-05 7.1E-10 76.4 22.5 223 78-324 43-299 (451)
333 PRK06173 adenosylmethionine--8 98.5 2.7E-05 5.8E-10 76.5 21.4 218 84-324 45-293 (429)
334 PRK13360 omega amino acid--pyr 98.5 2.6E-05 5.7E-10 76.8 21.4 162 150-324 107-301 (442)
335 PF00202 Aminotran_3: Aminotra 98.5 1.8E-06 3.8E-11 82.2 12.3 249 84-356 17-290 (339)
336 PRK06916 adenosylmethionine--8 98.5 3.2E-05 6.9E-10 76.6 21.1 219 84-324 57-310 (460)
337 PRK08742 adenosylmethionine--8 98.4 6.3E-05 1.4E-09 74.7 22.3 161 150-324 130-323 (472)
338 PRK06938 diaminobutyrate--2-ox 98.4 6.6E-05 1.4E-09 74.4 22.0 155 157-321 133-314 (464)
339 PF00464 SHMT: Serine hydroxym 98.4 8.5E-06 1.8E-10 78.3 15.0 205 84-321 21-245 (399)
340 PRK07481 hypothetical protein; 98.4 7.3E-05 1.6E-09 73.9 22.1 221 84-324 43-299 (449)
341 PRK06917 hypothetical protein; 98.4 6.9E-05 1.5E-09 74.0 21.9 226 79-324 28-286 (447)
342 PRK07483 hypothetical protein; 98.4 6.3E-05 1.4E-09 74.2 21.5 220 84-324 31-286 (443)
343 PRK05630 adenosylmethionine--8 98.4 5.6E-05 1.2E-09 74.1 21.0 214 84-324 41-287 (422)
344 PRK09221 beta alanine--pyruvat 98.4 9.1E-05 2E-09 73.1 21.8 163 150-325 110-305 (445)
345 PRK07036 hypothetical protein; 98.4 0.00015 3.3E-09 71.9 23.3 227 79-324 48-307 (466)
346 PLN02760 4-aminobutyrate:pyruv 98.4 0.00011 2.4E-09 73.5 22.4 223 84-324 90-346 (504)
347 COG0112 GlyA Glycine/serine hy 98.3 4.4E-05 9.6E-10 71.7 17.9 213 84-337 27-254 (413)
348 PRK07480 putative aminotransfe 98.3 7.4E-05 1.6E-09 74.0 20.8 253 78-357 46-338 (456)
349 PRK06105 aminotransferase; Pro 98.3 0.00015 3.2E-09 72.0 22.2 225 78-324 44-304 (460)
350 PRK06931 diaminobutyrate--2-ox 98.3 0.00024 5.2E-09 70.4 22.7 257 78-357 54-338 (459)
351 PRK05367 glycine dehydrogenase 98.3 5.1E-05 1.1E-09 80.9 18.4 172 126-316 538-719 (954)
352 PRK06149 hypothetical protein; 98.2 0.00016 3.4E-09 78.1 21.9 246 84-357 586-860 (972)
353 TIGR03811 tyr_de_CO2_Ent tyros 98.2 0.0001 2.3E-09 74.8 18.7 164 105-275 99-326 (608)
354 PRK06148 hypothetical protein; 98.2 0.0002 4.4E-09 77.4 21.6 246 84-356 625-899 (1013)
355 COG1921 SelA Selenocysteine sy 98.2 0.0004 8.8E-09 65.9 20.4 220 84-332 21-246 (395)
356 KOG1360 5-aminolevulinate synt 98.1 0.00024 5.2E-09 66.7 17.8 175 128-337 218-396 (570)
357 TIGR01366 serC_3 phosphoserine 98.1 5.5E-05 1.2E-09 72.6 14.1 175 98-310 10-191 (361)
358 PRK12566 glycine dehydrogenase 98.1 0.00013 2.7E-09 76.7 17.1 178 120-316 530-720 (954)
359 PRK08297 L-lysine aminotransfe 98.1 0.00046 9.9E-09 68.1 19.1 149 150-307 111-297 (443)
360 TIGR01365 serC_2 phosphoserine 98.0 0.00019 4E-09 69.1 14.8 141 155-330 62-207 (374)
361 PRK05367 glycine dehydrogenase 98.0 0.00052 1.1E-08 73.4 18.8 186 87-321 80-285 (954)
362 KOG1359 Glycine C-acetyltransf 97.9 0.00027 5.9E-09 63.8 12.5 212 83-338 67-288 (417)
363 COG1003 GcvP Glycine cleavage 97.8 0.00039 8.5E-09 66.1 13.3 139 120-271 96-243 (496)
364 PLN02452 phosphoserine transam 97.8 0.0011 2.4E-08 63.7 16.1 199 84-327 7-218 (365)
365 TIGR03251 LAT_fam L-lysine 6-t 97.8 0.0035 7.5E-08 61.7 20.1 126 150-277 104-267 (431)
366 TIGR00699 GABAtrns_euk 4-amino 97.7 0.0061 1.3E-07 60.4 20.2 125 150-276 123-299 (464)
367 KOG1357 Serine palmitoyltransf 97.7 0.00026 5.5E-09 67.5 9.2 234 84-353 137-389 (519)
368 PF03841 SelA: L-seryl-tRNA se 97.6 8.4E-05 1.8E-09 69.9 5.4 156 157-330 68-234 (367)
369 KOG1401 Acetylornithine aminot 97.6 0.013 2.7E-07 55.7 19.5 228 75-324 49-291 (433)
370 PRK12462 phosphoserine aminotr 97.5 0.0019 4E-08 61.8 13.6 168 156-356 73-253 (364)
371 PLN02974 adenosylmethionine-8- 97.5 0.019 4.1E-07 60.6 21.4 97 217-325 567-672 (817)
372 COG3033 TnaA Tryptophanase [Am 97.5 0.0033 7.1E-08 58.6 13.3 141 120-270 73-227 (471)
373 KOG1404 Alanine-glyoxylate ami 97.4 0.0043 9.4E-08 58.4 13.7 186 120-325 87-298 (442)
374 COG0161 BioA Adenosylmethionin 97.4 0.0053 1.1E-07 59.7 14.5 143 128-278 89-265 (449)
375 KOG1383 Glutamate decarboxylas 97.3 0.0028 6.2E-08 60.8 12.0 140 127-276 117-263 (491)
376 PF05889 SLA_LP_auto_ag: Solub 97.3 0.0018 4E-08 61.5 10.5 141 176-326 100-242 (389)
377 PLN02672 methionine S-methyltr 97.2 0.006 1.3E-07 65.7 14.5 210 114-351 414-641 (1082)
378 PLN02414 glycine dehydrogenase 97.2 0.018 3.9E-07 61.8 17.8 189 87-321 107-313 (993)
379 COG0403 GcvP Glycine cleavage 96.6 0.07 1.5E-06 51.1 14.1 153 87-267 79-245 (450)
380 KOG0628 Aromatic-L-amino-acid/ 96.4 0.0056 1.2E-07 58.8 5.3 94 179-277 184-280 (511)
381 PF02347 GDC-P: Glycine cleava 96.3 0.13 2.8E-06 50.1 14.1 151 85-267 67-231 (429)
382 KOG3843 Predicted serine hydro 96.1 0.02 4.3E-07 51.3 7.3 178 164-359 89-271 (432)
383 TIGR00461 gcvP glycine dehydro 96.1 0.51 1.1E-05 50.5 18.4 150 87-270 68-231 (939)
384 KOG0629 Glutamate decarboxylas 95.9 0.063 1.4E-06 51.3 9.7 87 182-273 202-294 (510)
385 COG3844 Kynureninase [Amino ac 95.8 0.1 2.2E-06 48.4 10.3 120 131-273 81-207 (407)
386 KOG1358 Serine palmitoyltransf 95.8 0.13 2.8E-06 48.8 11.2 204 84-316 95-313 (467)
387 KOG1402 Ornithine aminotransfe 94.2 1.5 3.2E-05 41.0 13.1 61 215-277 195-256 (427)
388 KOG1403 Predicted alanine-glyo 93.4 0.55 1.2E-05 43.1 8.8 159 156-324 107-295 (452)
389 KOG2040 Glycine dehydrogenase 91.3 2.9 6.4E-05 42.5 11.6 142 120-271 569-719 (1001)
390 PRK12566 glycine dehydrogenase 90.1 6.9 0.00015 42.1 13.9 148 84-266 80-241 (954)
391 KOG2467 Glycine/serine hydroxy 87.7 17 0.00038 34.6 13.1 218 70-316 28-262 (477)
392 COG1105 FruK Fructose-1-phosph 79.7 44 0.00095 31.3 12.3 55 213-271 110-168 (310)
393 PF14258 DUF4350: Domain of un 77.9 8.9 0.00019 27.0 5.8 61 189-268 9-70 (70)
394 KOG1405 4-aminobutyrate aminot 76.3 9.2 0.0002 36.2 6.7 90 215-310 254-348 (484)
395 KOG2741 Dimeric dihydrodiol de 72.3 58 0.0013 30.9 11.0 77 185-275 59-135 (351)
396 PF05368 NmrA: NmrA-like famil 72.2 58 0.0013 28.6 11.0 91 160-267 8-99 (233)
397 cd06568 GH20_SpHex_like A subg 72.2 8.6 0.00019 36.4 5.7 69 191-266 24-92 (329)
398 TIGR00683 nanA N-acetylneurami 71.7 80 0.0017 29.2 12.0 29 239-270 135-165 (290)
399 cd02742 GH20_hexosaminidase Be 71.2 11 0.00025 35.1 6.3 69 191-267 22-90 (303)
400 PRK04147 N-acetylneuraminate l 71.0 88 0.0019 28.9 13.4 26 242-270 142-167 (293)
401 COG1648 CysG Siroheme synthase 66.2 70 0.0015 28.1 9.8 93 149-270 12-106 (210)
402 cd06562 GH20_HexA_HexB-like Be 65.8 12 0.00026 35.7 5.3 64 191-266 24-87 (348)
403 COG0031 CysK Cysteine synthase 65.5 44 0.00096 31.1 8.7 56 147-206 59-116 (300)
404 COG1932 SerC Phosphoserine ami 64.2 84 0.0018 30.0 10.3 170 151-353 70-253 (365)
405 cd06570 GH20_chitobiase-like_1 61.7 15 0.00033 34.4 5.1 62 191-266 24-85 (311)
406 KOG1201 Hydroxysteroid 17-beta 60.5 1.5E+02 0.0032 27.7 12.7 104 146-257 35-144 (300)
407 TIGR03815 CpaE_hom_Actino heli 60.1 1.3E+02 0.0028 28.2 11.2 134 127-270 74-213 (322)
408 TIGR01470 cysG_Nterm siroheme 59.0 1.2E+02 0.0027 26.4 12.4 99 149-275 9-109 (205)
409 KOG1209 1-Acyl dihydroxyaceton 58.0 80 0.0017 28.1 8.3 87 149-243 7-94 (289)
410 PF02662 FlpD: Methyl-viologen 57.3 25 0.00055 28.1 5.0 61 198-263 28-91 (124)
411 cd00952 CHBPH_aldolase Trans-o 55.7 84 0.0018 29.4 9.0 25 242-269 147-171 (309)
412 COG1519 KdtA 3-deoxy-D-manno-o 55.4 2.1E+02 0.0046 28.0 12.6 123 129-270 28-154 (419)
413 cd06563 GH20_chitobiase-like T 53.9 33 0.00072 32.8 6.1 75 192-266 25-103 (357)
414 cd06569 GH20_Sm-chitobiase-lik 53.7 33 0.00071 34.0 6.1 76 191-266 28-114 (445)
415 PF00728 Glyco_hydro_20: Glyco 53.3 12 0.00027 35.4 3.1 67 191-266 24-90 (351)
416 PRK05678 succinyl-CoA syntheta 52.8 94 0.002 28.9 8.7 48 215-271 78-125 (291)
417 TIGR00064 ftsY signal recognit 51.2 2E+02 0.0043 26.4 11.7 112 150-270 72-201 (272)
418 PLN02955 8-amino-7-oxononanoat 51.0 2.7E+02 0.0059 27.9 15.6 158 120-300 110-285 (476)
419 PF03652 UPF0081: Uncharacteri 50.7 78 0.0017 25.7 7.0 61 210-272 34-98 (135)
420 COG0296 GlgB 1,4-alpha-glucan 49.8 28 0.00061 35.9 5.0 37 241-277 206-242 (628)
421 COG0816 Predicted endonuclease 48.5 64 0.0014 26.5 6.1 55 214-270 40-97 (141)
422 PF04413 Glycos_transf_N: 3-De 48.1 1.8E+02 0.0038 24.9 9.7 103 151-273 22-130 (186)
423 KOG1467 Translation initiation 47.7 2.7E+02 0.0059 27.8 11.0 130 125-271 324-471 (556)
424 PF10566 Glyco_hydro_97: Glyco 45.5 1.4E+02 0.003 27.5 8.4 26 247-272 30-56 (273)
425 PF10087 DUF2325: Uncharacteri 45.4 1.3E+02 0.0028 22.6 8.7 70 186-267 11-80 (97)
426 PRK11889 flhF flagellar biosyn 44.5 2.4E+02 0.0052 27.8 10.1 107 151-270 242-361 (436)
427 cd00640 Trp-synth-beta_II Tryp 43.9 2.2E+02 0.0047 25.2 9.5 49 157-206 56-104 (244)
428 smart00642 Aamy Alpha-amylase 43.2 33 0.00071 28.9 3.8 29 247-275 68-96 (166)
429 PRK02261 methylaspartate mutas 42.9 1.8E+02 0.0039 23.6 8.1 56 193-261 26-81 (137)
430 COG0505 CarA Carbamoylphosphat 42.7 73 0.0016 30.4 6.2 68 176-254 178-246 (368)
431 PF04273 DUF442: Putative phos 42.4 28 0.0006 27.2 3.0 59 175-238 25-95 (110)
432 PF01408 GFO_IDH_MocA: Oxidore 41.5 1.6E+02 0.0034 22.5 7.4 21 247-267 98-118 (120)
433 PF02310 B12-binding: B12 bind 41.3 1.6E+02 0.0035 22.6 8.4 66 192-270 22-89 (121)
434 COG0157 NadC Nicotinate-nucleo 41.1 1.7E+02 0.0038 26.9 8.2 146 126-306 107-268 (280)
435 TIGR03573 WbuX N-acetyl sugar 40.8 3.2E+02 0.007 25.9 12.9 94 156-268 65-166 (343)
436 PRK14723 flhF flagellar biosyn 40.3 3.5E+02 0.0076 28.9 11.4 135 128-272 161-306 (767)
437 COG0552 FtsY Signal recognitio 40.3 1.8E+02 0.004 27.6 8.4 114 151-270 140-268 (340)
438 PRK04296 thymidine kinase; Pro 39.6 2.4E+02 0.0052 24.0 12.6 113 175-303 28-143 (190)
439 TIGR02026 BchE magnesium-proto 39.4 2E+02 0.0044 28.8 9.4 66 194-270 32-100 (497)
440 cd07476 Peptidases_S8_thiazoli 39.3 97 0.0021 28.2 6.5 68 199-267 75-143 (267)
441 TIGR02012 tigrfam_recA protein 38.7 1.8E+02 0.0038 27.5 8.2 123 149-273 54-194 (321)
442 PRK09354 recA recombinase A; P 38.5 2.1E+02 0.0046 27.3 8.8 122 149-272 59-198 (349)
443 cd00950 DHDPS Dihydrodipicolin 38.2 3.1E+02 0.0068 25.0 10.5 26 242-270 138-163 (284)
444 cd02071 MM_CoA_mut_B12_BD meth 37.8 2E+02 0.0043 22.6 7.5 56 193-261 22-77 (122)
445 PLN02417 dihydrodipicolinate s 37.8 3.2E+02 0.007 25.0 10.8 35 232-270 128-162 (280)
446 cd06564 GH20_DspB_LnbB-like Gl 37.6 37 0.00079 32.0 3.6 26 241-266 74-99 (326)
447 PLN02556 cysteine synthase/L-3 37.2 2.8E+02 0.006 26.7 9.6 81 157-243 117-197 (368)
448 PLN02565 cysteine synthase 37.0 3.2E+02 0.007 25.6 9.8 82 121-205 37-120 (322)
449 PF04392 ABC_sub_bind: ABC tra 36.8 2.2E+02 0.0048 26.1 8.6 124 122-267 38-165 (294)
450 PRK04302 triosephosphate isome 36.6 2.9E+02 0.0064 24.2 10.7 13 193-205 80-92 (223)
451 PF08672 APC2: Anaphase promot 36.6 28 0.00061 24.0 1.9 47 214-271 12-58 (60)
452 PRK00109 Holliday junction res 36.6 1.6E+02 0.0035 23.9 6.8 59 213-273 40-101 (138)
453 PF00701 DHDPS: Dihydrodipicol 36.6 3.4E+02 0.0073 24.8 10.3 29 239-270 134-164 (289)
454 PLN02970 serine racemase 36.0 3.7E+02 0.0081 25.2 10.7 54 150-206 76-129 (328)
455 PRK08246 threonine dehydratase 35.6 3.7E+02 0.008 25.0 10.6 75 124-205 47-121 (310)
456 PRK05234 mgsA methylglyoxal sy 35.3 2.5E+02 0.0054 23.0 7.8 71 190-268 41-112 (142)
457 cd02067 B12-binding B12 bindin 35.1 2.1E+02 0.0046 22.1 7.9 56 193-261 22-77 (119)
458 PF13460 NAD_binding_10: NADH( 34.9 2.4E+02 0.0053 23.2 8.0 53 196-263 38-90 (183)
459 TIGR01501 MthylAspMutase methy 34.8 2E+02 0.0044 23.3 7.0 60 191-263 22-81 (134)
460 PF00128 Alpha-amylase: Alpha 34.8 35 0.00076 31.1 3.0 30 247-276 50-79 (316)
461 TIGR01019 sucCoAalpha succinyl 34.6 3.5E+02 0.0077 25.0 9.4 47 215-270 76-122 (286)
462 PLN03013 cysteine synthase 34.5 3.6E+02 0.0078 26.6 9.9 82 121-205 145-228 (429)
463 TIGR00334 5S_RNA_mat_M5 ribonu 34.4 51 0.0011 28.0 3.5 32 243-274 30-61 (174)
464 TIGR01244 conserved hypothetic 34.2 44 0.00096 27.0 3.1 49 192-245 51-102 (135)
465 COG2984 ABC-type uncharacteriz 34.1 4.1E+02 0.0088 25.1 11.1 128 120-270 65-196 (322)
466 COG2102 Predicted ATPases of P 33.8 3.4E+02 0.0074 24.1 10.7 137 156-316 6-156 (223)
467 COG1023 Gnd Predicted 6-phosph 33.7 3.7E+02 0.008 24.5 10.3 106 215-338 49-154 (300)
468 cd00953 KDG_aldolase KDG (2-ke 33.3 3.8E+02 0.0083 24.5 13.8 25 242-269 133-158 (279)
469 PRK05703 flhF flagellar biosyn 32.5 4.9E+02 0.011 25.6 11.5 131 129-272 200-343 (424)
470 KOG2040 Glycine dehydrogenase 31.9 6.3E+02 0.014 26.6 14.4 92 157-267 186-281 (1001)
471 cd00408 DHDPS-like Dihydrodipi 31.3 1.1E+02 0.0024 27.9 5.7 67 199-267 2-71 (281)
472 TIGR00649 MG423 conserved hypo 31.1 5.1E+02 0.011 25.2 11.6 74 176-263 318-401 (422)
473 PF04412 DUF521: Protein of un 30.8 1.4E+02 0.003 29.1 6.3 44 213-262 269-316 (400)
474 TIGR02104 pulA_typeI pullulana 30.6 56 0.0012 33.8 3.8 36 237-275 220-255 (605)
475 smart00857 Resolvase Resolvase 30.6 2.8E+02 0.0061 22.1 8.1 21 247-267 80-100 (148)
476 COG0352 ThiE Thiamine monophos 30.5 1.1E+02 0.0024 27.0 5.1 51 216-271 24-74 (211)
477 PF03435 Saccharop_dh: Sacchar 30.4 3.1E+02 0.0067 26.2 8.8 74 179-271 25-99 (386)
478 PF02844 GARS_N: Phosphoribosy 30.3 47 0.001 25.5 2.4 48 218-267 14-67 (100)
479 TIGR02764 spore_ybaN_pdaB poly 30.2 3.4E+02 0.0073 22.9 8.2 72 191-266 113-185 (191)
480 PF11802 CENP-K: Centromere-as 30.1 2.3E+02 0.0049 25.9 7.0 39 164-202 212-253 (268)
481 COG2089 SpsE Sialic acid synth 29.6 4.9E+02 0.011 24.7 10.2 102 150-263 102-207 (347)
482 TIGR01761 thiaz-red thiazoliny 29.1 3.7E+02 0.0081 25.6 8.8 70 185-267 51-120 (343)
483 PLN03244 alpha-amylase; Provis 29.0 1E+02 0.0023 32.8 5.3 41 237-277 429-469 (872)
484 PF12427 DUF3665: Branched-cha 28.9 88 0.0019 16.8 2.5 19 233-255 4-22 (23)
485 TIGR00623 sula cell division i 28.7 3.6E+02 0.0079 22.8 11.1 84 176-266 59-142 (168)
486 PF04016 DUF364: Domain of unk 28.6 70 0.0015 26.3 3.4 63 157-225 68-130 (147)
487 PRK12564 carbamoyl phosphate s 28.4 3.1E+02 0.0067 26.3 8.2 75 177-266 177-252 (360)
488 COG2062 SixA Phosphohistidine 28.4 2.7E+02 0.0058 23.5 6.8 29 211-242 82-112 (163)
489 PRK10595 SOS cell division inh 28.3 3.6E+02 0.0079 22.7 11.0 93 166-266 44-138 (164)
490 cd00951 KDGDH 5-dehydro-4-deox 28.3 1.2E+02 0.0025 28.1 5.2 49 211-260 15-64 (289)
491 TIGR02402 trehalose_TreZ malto 28.3 1.1E+02 0.0024 31.1 5.4 33 243-275 154-186 (542)
492 cd02072 Glm_B12_BD B12 binding 28.2 3.2E+02 0.0069 22.0 7.0 59 192-263 21-79 (128)
493 COG2240 PdxK Pyridoxal/pyridox 28.1 1.8E+02 0.0039 26.9 6.1 34 242-275 79-117 (281)
494 cd06449 ACCD Aminocyclopropane 27.9 3.9E+02 0.0085 24.7 8.8 17 190-206 100-116 (307)
495 PF13241 NAD_binding_7: Putati 27.8 1.2E+02 0.0026 23.0 4.4 84 149-267 7-90 (103)
496 COG0549 ArcC Carbamate kinase 27.8 2.5E+02 0.0055 26.0 6.9 63 236-301 125-192 (312)
497 PRK09441 cytoplasmic alpha-amy 27.7 68 0.0015 32.0 3.8 29 247-275 79-107 (479)
498 PF03786 UxuA: D-mannonate deh 27.5 98 0.0021 29.6 4.5 41 229-269 25-65 (351)
499 PF01650 Peptidase_C13: Peptid 27.5 4.7E+02 0.01 23.7 12.4 81 212-303 78-180 (256)
500 COG0313 Predicted methyltransf 26.7 4.5E+02 0.0097 24.2 8.4 106 181-306 90-195 (275)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-53 Score=386.81 Aligned_cols=300 Identities=56% Similarity=0.945 Sum_probs=288.5
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (363)
|+.++..++|||+++.+.|++++++++|||++|.|.|+.+.+++++.|+++...+.+......|.|..|.++++++++++
T Consensus 2 F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l 81 (396)
T COG1448 2 FEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL 81 (396)
T ss_pred ccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999998777779999999999999999999
Q ss_pred HhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHH
Q 017967 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (363)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 218 (363)
+++...+.+.++++..+||.|||||+.+.+.++..+.|..+|.|++|+|+++..+++..|.++..||+++.++.++|++.
T Consensus 82 lFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ 161 (396)
T COG1448 82 LFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDG 161 (396)
T ss_pred hcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHH
Confidence 99988778889999999999999999999999999889889999999999999999999999999999999899999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 219 l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
+.+.|++.+++.++++++++|||||..++.++|.+|+++.++++++.+.|-+|++|..+ .++|...+|.|+.....+++
T Consensus 162 mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lv 240 (396)
T COG1448 162 MLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLV 240 (396)
T ss_pred HHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 77899999999988888999
Q ss_pred EEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+.||||+||++|.|||.+.+++.|++.+.++.+|+..+++.+|++||..+..+++.+|++.
T Consensus 241 a~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p 301 (396)
T COG1448 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNP 301 (396)
T ss_pred EehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCH
Confidence 9999999999999999999999999999999999999999999999999999999998854
No 2
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-53 Score=376.38 Aligned_cols=315 Identities=58% Similarity=0.990 Sum_probs=301.5
Q ss_pred cCccchhhhhcccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC
Q 017967 45 FGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP 124 (363)
Q Consensus 45 ~~~~~~~~~~~~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~ 124 (363)
.+..++++....|||++|+++|||||+.+++.|+.++++.+|||++|.|+|+++.|++++.|++|+.++.....+.+|.|
T Consensus 14 ~~~~a~~~~~~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlp 93 (427)
T KOG1411|consen 14 LGLAAAASARASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLP 93 (427)
T ss_pred cchhhhhcccccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhcc
Confidence 34445566666789999999999999999999999999999999999999999999999999999999887777799999
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEE
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEY 204 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 204 (363)
..|+++|.+..+++.++...+.+...+|+++|+.+||||+.+.+.++..+-++..|.+++|+|.++.++++.+|+.+..|
T Consensus 94 I~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~y 173 (427)
T KOG1411|consen 94 ITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFY 173 (427)
T ss_pred ccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeee
Confidence 99999999999999999998999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchh
Q 017967 205 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (363)
Q Consensus 205 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 284 (363)
.++++.+.++|++.+.+.+.+.+++..++++.+.|||||+..+.++|++|.++.++++++.|.|.+|++|..++.+.|..
T Consensus 174 rYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~ 253 (427)
T KOG1411|consen 174 RYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQ 253 (427)
T ss_pred eeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 285 SVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 285 ~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++|.|++.+.+++++.||.|++||+|.|+|.+.++|.+++.+.++.+|++.+.+.++++||..+.+|++.+|++.
T Consensus 254 avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~ 328 (427)
T KOG1411|consen 254 AVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDP 328 (427)
T ss_pred HHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCCh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998865
No 3
>PLN02397 aspartate transaminase
Probab=100.00 E-value=2e-48 Score=379.99 Aligned_cols=324 Identities=65% Similarity=1.057 Sum_probs=270.8
Q ss_pred CCccccccccCccchhhhhcccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHc
Q 017967 36 TAGFIKTKSFGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 115 (363)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~ 115 (363)
.++|-+.|++++-+|+.+...|.|+++...+.++|..+.+.++.+..+.+++|+.|.+.+.++++.+.+.+.++...+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~ 80 (423)
T PLN02397 1 SNPFLKAKSRSRSSMAAAAASSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLA 80 (423)
T ss_pred CCcccccccccccchhhhhhhhHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhc
Confidence 36788899999999999988999999999999999999998888777789999999866777777778889988777654
Q ss_pred cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh
Q 017967 116 RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN 195 (363)
Q Consensus 116 ~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~ 195 (363)
.+...+|++..|.++||+++++++.+.......+++|...++.+|+|+..++..++..+.|||+|++++|+|+.|...++
T Consensus 81 ~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~ 160 (423)
T PLN02397 81 GSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFR 160 (423)
T ss_pred cCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH
Confidence 44446899999999999999999977665555556665556778888877776677767799999999999999999999
Q ss_pred hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 196 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
..|++++.+++.+++++++|++.+++.+...+++++++++++||||||.+++.+++++|+++|++||++||+||+|.+|.
T Consensus 161 ~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~ 240 (423)
T PLN02397 161 DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFA 240 (423)
T ss_pred HcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCcc
Confidence 99999999998544568999999998887543467899999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcc
Q 017967 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSS 355 (363)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~ 355 (363)
+++...+..++..+....+++|+++||||.|+++|||+||+++++++++.++++.+++....+..+.+++.+.|.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 320 (423)
T PLN02397 241 SGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATI 320 (423)
T ss_pred CCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHH
Confidence 85321123455555444568999999999999999999999545666777777887888777777888999999999998
Q ss_pred cccc
Q 017967 356 MNGK 359 (363)
Q Consensus 356 l~~~ 359 (363)
|+..
T Consensus 321 L~~~ 324 (423)
T PLN02397 321 LGDP 324 (423)
T ss_pred hCCH
Confidence 8764
No 4
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-47 Score=369.72 Aligned_cols=302 Identities=57% Similarity=0.972 Sum_probs=247.6
Q ss_pred ccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHH
Q 017967 58 RFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 137 (363)
Q Consensus 58 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 137 (363)
.|.++...+.+++..+.+.++...+++++||+.|.|.+..++..+.+.+.++...+.......+|++..|.++||+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~ 83 (404)
T PTZ00376 4 LFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQK 83 (404)
T ss_pred hhhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Confidence 36677777888888888877766556899999999755566666677888887665533334789999999999999999
Q ss_pred HHhcCCCCcccCCcEEEEeccchhHHHHHHHHHH-HHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 138 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALI-ERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 138 ~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~-~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
|+.+..+..+++++|++.+|.|+++|+.++..++ ..+.|||+|++++|+|+.|...++..|++++.+|+++++++++|+
T Consensus 84 ~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~ 163 (404)
T PTZ00376 84 LLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDF 163 (404)
T ss_pred HhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCH
Confidence 9977766677889998556999999999886544 345799999999999999999999999999999996555689999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v 296 (363)
+.+++.++...++++++++||||||||.+++.+++++|+++|++|+++||+||+|.+|.+++.+.+..++..+.+..+++
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~v 243 (404)
T PTZ00376 164 DGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEF 243 (404)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcE
Confidence 99999987533456788899999999999999999999999999999999999999999853211233444444445689
Q ss_pred EEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 297 i~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
|+++||||.|+++|+|+||++++..+++.++++++++.+..+..+.+++.++|.+++.+|++.
T Consensus 244 i~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 306 (404)
T PTZ00376 244 LVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDP 306 (404)
T ss_pred EEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCH
Confidence 999999999999999999995545668777778887777666677788999999999998764
No 5
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-47 Score=338.28 Aligned_cols=304 Identities=48% Similarity=0.839 Sum_probs=289.9
Q ss_pred ccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHc-cCCCCCCCCCcchHHHHHH
Q 017967 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-RGENKEYLPIEGLAAFNKV 134 (363)
Q Consensus 56 ~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~Y~~~~G~~~lr~a 134 (363)
+|+|.+++.+++..++.+.+.|+++..|.++||++|.|+++++.||++|.|+++...+.+ .+.+++|.|..|++.|+++
T Consensus 3 ~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~ 82 (410)
T KOG1412|consen 3 MSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKA 82 (410)
T ss_pred cchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhh
Confidence 578999999999999999999999999999999999999999999999999999887763 4678999999999999999
Q ss_pred HHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCC-CeEEEecccCCCCC
Q 017967 135 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-PWSEYRYYDPKTVG 213 (363)
Q Consensus 135 ia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~-~~~~v~~~~~~~~~ 213 (363)
.++.+.+...+.+.++++.-+|+.+||||+.+.+.++..+.+...|.+.+|+|.++..+++..|. ++..+++++.+..+
T Consensus 83 A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~ 162 (410)
T KOG1412|consen 83 ATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKC 162 (410)
T ss_pred hHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCce
Confidence 99999999999999999999999999999999999999888888999999999999999999994 68899999888899
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC
Q 017967 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (363)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (363)
+|++.|...++.+|++.++++..+.|||||...+.++|.+|+++.++++++.+.|-+|++|..++++.|.+.+|.|++.+
T Consensus 163 ~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g 242 (410)
T KOG1412|consen 163 VDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQG 242 (410)
T ss_pred ecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcC
Confidence 99999999999999999888888889999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
..++++.||+|+||++|.|+|.+.++..++..+..+.+||..+.+..+++||.++.+|++++|+.+
T Consensus 243 ~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP 308 (410)
T KOG1412|consen 243 FELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTP 308 (410)
T ss_pred CeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCH
Confidence 999999999999999999999999999999999999999999999999999999999999998854
No 6
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=6.5e-46 Score=360.04 Aligned_cols=298 Identities=52% Similarity=0.878 Sum_probs=242.7
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (363)
|.++...+++++..+...++....+++|+|++|.|.+.+..++..+.+.++..+........+|.+..|.++||++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 55677778888888877777655568999999986433333333578888887776443446899999999999999999
Q ss_pred HhcCCCCcccCCcE--EEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 139 LFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 139 l~~~~~~~~~~~~i--~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
+.+..+..+++++| ++ |.|+++|+.++.+++..+.|||+|++++|+|+.|..+++..|++++.+|+.+++++++|+
T Consensus 82 ~~~~~~~~~~~~~i~v~i--T~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~ 159 (396)
T PRK09257 82 LFGADSPALAAGRVATVQ--TPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDF 159 (396)
T ss_pred hcCCCCcccccCeEEEEe--cCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCH
Confidence 98776666788887 56 999999999996656556899999999999999999999999999999985455689999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v 296 (363)
+.+++.++..+.+++++++||||||||.+++.+++++|+++|++|+++||+||+|.+|.++. +.+..++..+....+++
T Consensus 160 ~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~v 238 (396)
T PRK09257 160 DAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLEL 238 (396)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HHHHHHHHHHHhcCCcE
Confidence 99999887544456888889999999999999999999999999999999999999998641 12244555554456789
Q ss_pred EEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 297 i~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
|+++||||.|+++|+|+||+++++++++.+.+++++++...+..+.+++.+.|.+++.+|++.
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 301 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDP 301 (396)
T ss_pred EEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCH
Confidence 999999999999999999994445566666677777777666777788999999999988763
No 7
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-46 Score=357.23 Aligned_cols=258 Identities=21% Similarity=0.261 Sum_probs=223.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCc-EEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~-i~~~~t~ggt 161 (363)
.++|+|++|+|. .. .++.+.+++.+.+..+.. .|++..|.++||+++|+++.++++..+++++ |++ |.|++
T Consensus 28 ~~vi~l~iG~Pd-~~----~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiiv--t~Ga~ 99 (393)
T COG0436 28 EDVIDLSIGEPD-FP----TPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIV--TAGAK 99 (393)
T ss_pred CCEEEeCCCCCC-CC----CCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCHH
Confidence 479999999982 22 355677777666654332 7889999999999999999999998888877 988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccC-CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+|+.++ ++.++.|||+|++++|.|+.|...+...|.+++.++++.+ ++|.+|++.+++++++ +++++++++|||
T Consensus 100 ~al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~---ktk~i~ln~P~N 174 (393)
T COG0436 100 EALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP---KTKAIILNSPNN 174 (393)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc---cceEEEEeCCCC
Confidence 999888 6777899999999999999999999999999999998544 4899999999999983 688999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++++++++|+++|++||++||.||+|.++.|++. .+.++.++.+..+++|+++||||.|+++|||+||+ ++
T Consensus 175 PTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~--v~ 250 (393)
T COG0436 175 PTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWRIGWV--VG 250 (393)
T ss_pred CcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccceeEe--ec
Confidence 999999999999999999999999999999999999852 24455555444589999999999999999999999 77
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
++++ +++.+.++++...+|++.++|.++..+|+..++
T Consensus 251 ~~~~----l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~ 287 (393)
T COG0436 251 PPEE----LIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS 287 (393)
T ss_pred ChHH----HHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc
Confidence 7666 777777888888999999999999999998753
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=4.5e-41 Score=327.39 Aligned_cols=275 Identities=17% Similarity=0.192 Sum_probs=222.4
Q ss_pred CCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHh
Q 017967 61 GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF 140 (363)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~ 140 (363)
++...+.+.+..+...... ++.|+|+.|.|. . .+++.+.+++.+.+.... .+|++..|.++||+++++++.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~---~~~i~l~~G~P~-~----~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~Lr~aia~~~~ 105 (413)
T PLN00175 35 RLEKFKTTIFTQMSSLAIK---HGAINLGQGFPN-F----DGPDFVKEAAIQAIRDGK-NQYARGFGVPELNSAIAERFK 105 (413)
T ss_pred HhhcCCCCHHHHHHHHhhc---CCeEecCCCCCC-C----CCCHHHHHHHHHHHhcCC-CCcCCCCCCHHHHHHHHHHHH
Confidence 4445555556555544332 379999999973 2 235667777766664433 689999999999999999998
Q ss_pred cCCCCcccCC-cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHH
Q 017967 141 GADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM 219 (363)
Q Consensus 141 ~~~~~~~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 219 (363)
+.++..++++ +|++ |.|+++++.++ +..++.|||.|++++|+|+.|...++..|++++.++++++ ++++|++.+
T Consensus 106 ~~~g~~~~~~~~I~v--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l 180 (413)
T PLN00175 106 KDTGLVVDPEKEVTV--TSGCTEAIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDEL 180 (413)
T ss_pred HHhCCCCCCCCCEEE--eCCHHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHH
Confidence 8778888887 7988 99999998887 4556789999999999999999999999999999998643 488999999
Q ss_pred HHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE
Q 017967 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (363)
Q Consensus 220 ~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 299 (363)
++.+.. ++++++++|||||||.+++.+++++|+++|++++++||+||+|.++.+++ +..++..+....+++|++
T Consensus 181 ~~~~~~---~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~~vi~i 254 (413)
T PLN00175 181 KAAFTS---KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYERTVTM 254 (413)
T ss_pred HHhcCc---CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcCcEEEE
Confidence 998863 46778889999999999999999999999999999999999999998863 223444443335789999
Q ss_pred EcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 300 ~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+||||.|+++|+|+||+ +++ ++ +++.+.........+++.+.|.+++.+|+..+.|
T Consensus 255 ~SfSK~~~~~G~RiG~~--v~~-~~----l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~ 310 (413)
T PLN00175 255 NSLGKTFSLTGWKIGWA--IAP-PH----LTWGVRQAHSFLTFATATPMQWAAVAALRAPESY 310 (413)
T ss_pred ecchhhccCcchheeee--EeC-HH----HHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHH
Confidence 99999999999999999 776 66 5666666666666789999999999998776554
No 9
>PLN02187 rooty/superroot1
Probab=100.00 E-value=8.8e-41 Score=329.00 Aligned_cols=270 Identities=14% Similarity=0.154 Sum_probs=214.1
Q ss_pred CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 80 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 80 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
....++|+|++|.|. ..+.+.+++.+.+++.+.+..+....|.+..|.++||+++|+++...++..+++++|++ |.|
T Consensus 63 ~~~~~vi~l~~Gdp~-~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~i--t~G 139 (462)
T PLN02187 63 DVNKTILPLGHGDPS-VYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFL--TAG 139 (462)
T ss_pred CCCCCeEECCCCCCC-CCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEE--eCC
Confidence 334589999999862 22223345667777776665444478999999999999999999887788889999988 999
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
+++++.++. ..++.|||.|++++|+|+.|...++..|++++.+++.+++++++|++.|+++++ +++++++++|||
T Consensus 140 ~~~al~~~~--~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v~i~nP~ 214 (462)
T PLN02187 140 CNQGIEIVF--ESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVAMVVINPN 214 (462)
T ss_pred HHHHHHHHH--HHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEEEEEeCCC
Confidence 999999984 445689999999999999999999999999999998655679999999998876 356788889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEe
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++|+++||||.|++||+|+||+ +
T Consensus 215 NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~-~~~~~vi~l~SfSK~f~~pGlRiG~~--v 289 (462)
T PLN02187 215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKF-ASIVPVLTLAGISKGWVVPGWKIGWI--A 289 (462)
T ss_pred CCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHh-ccCCcEEEEecchhhcCCccceeEEE--E
Confidence 9999999999999999999999999999999999988642 23344444 22357999999999999999999999 7
Q ss_pred eCChhHHHHHHHHHHhhhcccc--CCCchHHHHHHhccccc-cccC
Q 017967 320 CSSSDLAARVKSQLKRLARPMY--SNPPPMLLGIQLSSMNG-KQRW 362 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~--~~~s~~~q~~~~~~l~~-~~~w 362 (363)
+++++.+..+++.+..+..... .+++.+.|.++..+|+. .++|
T Consensus 290 ~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~ 335 (462)
T PLN02187 290 LNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNF 335 (462)
T ss_pred ecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHH
Confidence 7655422223345554444332 25689999999998864 3344
No 10
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-40 Score=323.88 Aligned_cols=275 Identities=16% Similarity=0.175 Sum_probs=215.6
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (363)
+..+.+.+..+..+++|+|++|.|.. .+...+++.+.+++.+........+|.+..|.++||+++|+++.+.++..+++
T Consensus 19 ~~~~~~~~~~~~~~~~i~l~~G~p~~-~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 97 (409)
T PLN00143 19 VKFLKENFNEDDHRLAISFGFGDPSC-FECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSP 97 (409)
T ss_pred HHHHHHhcccCCCCceeeCCCCCCCC-CCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH
Confidence 44444455566677999999999731 12223466777777666544333679999999999999999998888888899
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
++|++ |+|+++++.++ +..++.+||.|++++|+|+.|...++..|++++.+++.+++++.+|++.|+++++ ++
T Consensus 98 ~~I~i--t~G~~~al~~~--~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~ 170 (409)
T PLN00143 98 DDVYL--TLGCKHAAEII--IKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD---EN 170 (409)
T ss_pred hhEEE--ecChHHHHHHH--HHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc---cC
Confidence 99988 99999999998 4445789999999999999999999999999999998655678899999998875 34
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
+++++++|||||||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+ +..+++++++||||.|++|
T Consensus 171 ~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~p 247 (409)
T PLN00143 171 TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGLF-ASIVPVITLGSISKRWMIP 247 (409)
T ss_pred CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhhh-cccCcEEEEccchhhcCCC
Confidence 66777899999999999999999999999999999999999999988642 12233333 4446899999999999999
Q ss_pred cccceEEEEeeCCh-hHHH--HHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 310 AERIGAMNVVCSSS-DLAA--RVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 310 G~RvG~i~~v~~~~-~~~~--~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+|+||+ +++++ ..++ .+++.+...... ...++.+.|.++..+|++
T Consensus 248 GlRvG~~--v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~ 296 (409)
T PLN00143 248 GWGLGWL--VTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEK 296 (409)
T ss_pred ccceEEE--EeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhc
Confidence 9999999 77544 2222 123444444332 334588999999988864
No 11
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.2e-40 Score=320.54 Aligned_cols=246 Identities=15% Similarity=0.091 Sum_probs=199.2
Q ss_pred ccHHHHHHHHHHHc-cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-CCCCE
Q 017967 102 VLDVVKKAENLMLE-RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAK 179 (363)
Q Consensus 102 ~~~~v~~a~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~ 179 (363)
+++.+.++...+.. .....+|++..|.++||+++|+|+.+.++..+++++|++ |.|+++++.++ +..++ .|||.
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~--~~~l~~~pGd~ 157 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFL--TDGASKGVMQI--LNAVIRGEKDG 157 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--cccHHHHHHHH--HHHHcCCCCCE
Confidence 45666666655432 223478999999999999999999887788889999988 99999998887 34445 59999
Q ss_pred EEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcEEEEEcCCCCCCCCCCCHHHHHHHHH
Q 017967 180 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (363)
Q Consensus 180 Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~i~~p~NPTG~~~s~~~~~~i~~ 256 (363)
|++++|+|+.|...++..|.+++.++++++++|++|++.+++.+++.. .++++++++|||||||.+++.+++++|++
T Consensus 158 Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~ 237 (407)
T PLN02368 158 VLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILK 237 (407)
T ss_pred EEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHH
Confidence 999999999999999999999999999766679999999999987411 14678888999999999999999999999
Q ss_pred HHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-------cCCeEEEEEcCcccc-ccccccceEEEEee--CChhHH
Q 017967 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-------RGMELLVAQSYSKNL-GLYAERIGAMNVVC--SSSDLA 326 (363)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-------~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~--~~~~~~ 326 (363)
+|+++|++||+||+|.++.|++. ....++..+.. ..+++|+++||||.| |++|||+||+ ++ .+++
T Consensus 238 ~a~~~~~~II~DE~Y~~l~y~~~-~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~--i~~~~~~~-- 312 (407)
T PLN02368 238 FCYQERLVLLGDEVYQQNIYQDE-RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYF--EMTNIPPK-- 312 (407)
T ss_pred HHHHcCCEEEEEccccccccCCC-CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEE--EEeCCCHH--
Confidence 99999999999999999998642 12334443321 235899999999998 8999999999 64 3466
Q ss_pred HHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 327 ARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 327 ~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+++.+.+... ...+++.++|.++..+|+..
T Consensus 313 --li~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~ 342 (407)
T PLN02368 313 --TVEEIYKVAS-IALSPNVSGQIFMGLMVNPP 342 (407)
T ss_pred --HHHHHHHHhc-ccCCCCcHHHHHHHHHhCCC
Confidence 5666666533 34578999999999988754
No 12
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-40 Score=322.42 Aligned_cols=276 Identities=15% Similarity=0.146 Sum_probs=217.3
Q ss_pred CCCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcC
Q 017967 65 APPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA 142 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~ 142 (363)
..++.+..+....... ..++.++|+.|.|. ..+++.+.+++.+.......+.|. ..|.++||+++|+++...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~ 85 (399)
T PRK07681 12 FQSSIFSELGAYKKEKIAAGHKMIDLSIGNPD-----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNT 85 (399)
T ss_pred cCccHHHHHHHHHHHhhhcCCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHH
Confidence 3344555554443221 23478999999863 123566777776665432225564 589999999999999888
Q ss_pred CCCcccC-CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 143 DNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 143 ~~~~~~~-~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
++..+++ ++|++ |+|+++++.++ +...+.+||.|++++|+|+.|...++..|++++.+|+++++++.+|++.+++
T Consensus 86 ~g~~~~~~~~I~i--t~G~~~al~~~--~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 161 (399)
T PRK07681 86 HNVILNADKEVLL--LMGSQDGLVHL--PMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPE 161 (399)
T ss_pred hCCCCCCCCeEEE--CCCcHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHH
Confidence 8888888 89988 99999999888 4445789999999999999999999999999999999655567889999998
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
.+. +++++++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. ...+...+....+++|+++|
T Consensus 162 ~~~---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S 236 (399)
T PRK07681 162 EIA---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGAKEVGVEINS 236 (399)
T ss_pred hcc---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCCcccEEEEee
Confidence 875 3567888899999999999999999999999999999999999999987642 22333333223468999999
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
|||.||++|+|+||+ +++ ++ +++.+.........+++.+.|.++..+|++.++|
T Consensus 237 ~SK~~~~~GlRiG~~--i~~-~~----l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 290 (399)
T PRK07681 237 LSKSYSLAGSRIGYM--IGN-EE----IVRALTQFKSNTDYGVFLPIQKAACAALRNGAAF 290 (399)
T ss_pred cccccCCccceeEEE--ecC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHH
Confidence 999999999999999 665 66 5666666655556689999999999998876554
No 13
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-41 Score=308.20 Aligned_cols=277 Identities=16% Similarity=0.130 Sum_probs=225.8
Q ss_pred CCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHh
Q 017967 61 GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF 140 (363)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~ 140 (363)
++....++.+-++.+..-+...+.. |+.|.+ |. .+++.+.+++.++......++|++..|+++|++++++.+.
T Consensus 11 ~l~~~~~~vw~e~~~la~e~~~~~~--LgqGfp-~~----~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~s 83 (420)
T KOG0257|consen 11 NLSTSKPYVWTEINRLAAEHKVPNP--LGQGFP-DF----PPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYS 83 (420)
T ss_pred cccccCCcHHHHHHHHHHhcCCCCc--ccCCCC-CC----CCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHH
Confidence 4455555566666655544433222 999997 32 3467777777777755445899999999999999999987
Q ss_pred cCCCCcccC-CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecc------cCCCCC
Q 017967 141 GADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY------DPKTVG 213 (363)
Q Consensus 141 ~~~~~~~~~-~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~------~~~~~~ 213 (363)
..++....+ ++|++ |.|+++++..+ ++.++++||+|+|.+|.|+.|...++.+|.+.+.++.. ...+|.
T Consensus 84 e~~~~~~~~~~eVlV--T~GA~~ai~~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 84 EFYGGLLDPDDEVLV--TAGANEAISSA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred HHhccccCCcccEEE--ecCchHHHHHH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 755554444 56988 99999997765 77889999999999999999999999999999999986 456799
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC
Q 017967 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (363)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (363)
+|++.++.++++ +++++++|+||||||.+++++|+++|+++|++||+++|.||+|..+.+++. .+..+.++.+..
T Consensus 160 ~D~~~le~~~t~---kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~--~h~r~aslPgm~ 234 (420)
T KOG0257|consen 160 LDPEELESKITE---KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGN--KHIRIASLPGMY 234 (420)
T ss_pred CChHHHHhhccC---CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCC--cceeeecCCchh
Confidence 999999999984 688999999999999999999999999999999999999999999999853 234444445667
Q ss_pred CeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
++++.++||||.||++|||+||+ +.+ +. +.+.+..+.+.....++.+.|.+.+..+...+
T Consensus 235 ertitvgS~gKtf~~TGWrlGW~--igp-~~----L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 235 ERTITVGSFGKTFGVTGWRLGWA--IGP-KH----LYSALFPVHQNFVFTCPTPIQEASAAAFALEL 294 (420)
T ss_pred heEEEeccccceeeeeeeeeeee--ech-HH----hhhhHHHHhhccccccCcHHHHHHHHHHhhhh
Confidence 89999999999999999999999 774 65 78888888888888888888998877765543
No 14
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=3.4e-40 Score=319.18 Aligned_cols=253 Identities=14% Similarity=0.113 Sum_probs=198.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
.++|+|+.|++. ..+++.+.+++..........+|++..|.++||+++|+++.+.++..++++ +|++ |+|++
T Consensus 30 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~Gs~ 102 (388)
T PRK07366 30 KELIDLSLGSSD-----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LIGSQ 102 (388)
T ss_pred CCeEEeCCCCCC-----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CCCcH
Confidence 378999999862 122566777776655433346799999999999999999988888888888 6988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.|||.|++++|+|+.|...++..|++++.+|++++.++.+|++.+++.+.. +++++++||||||
T Consensus 103 ~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~~p~NP 177 (388)
T PRK07366 103 EGTAHL--PLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA---QARLMVLSYPHNP 177 (388)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc---cceEEEEeCCCCC
Confidence 999988 44457799999999999999999999999999999996555677899999877652 4667888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|++++++||+||+|.+|.+++.. ...++..+....+++++++||||.||+||+|+||+ +++
T Consensus 178 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~--v~~ 254 (388)
T PRK07366 178 TTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV-EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFA--IGN 254 (388)
T ss_pred CCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC-CCCChhhCCCCcccEEEEeecccccCCcchhheeh--cCC
Confidence 999999999999999999999999999999999886421 12234333233457899999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCC-chHHHHHHhcc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNP-PPMLLGIQLSS 355 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~-s~~~q~~~~~~ 355 (363)
++ +++++.+.......+. +.+.|.+++.+
T Consensus 255 -~~----li~~l~~~~~~~~~~~~~~~~~~a~~~l 284 (388)
T PRK07366 255 -AQ----LIQALRQVKAVVDFNQYRGILNGAIAAL 284 (388)
T ss_pred -HH----HHHHHHHHHhhcccCCCHHHHHHHHHHH
Confidence 66 5666665554444444 34445544443
No 15
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-40 Score=320.90 Aligned_cols=283 Identities=13% Similarity=0.136 Sum_probs=211.6
Q ss_pred CCCCCCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHH
Q 017967 62 VTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 139 (363)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l 139 (363)
+...+.+.+..+....+.. ..++.++|+.|.|. . + .++.+.++..+........+|.+..|.++||+++|+|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~-~---~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l 84 (403)
T PRK08636 10 IKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPD-G---P-TPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWY 84 (403)
T ss_pred HHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCC-C---C-CCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHH
Confidence 3334444444444433221 22478999999863 1 1 23334444433332223378999999999999999999
Q ss_pred hcCCCCcccCC-cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHH
Q 017967 140 FGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (363)
Q Consensus 140 ~~~~~~~~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 218 (363)
...++..++++ +|++ |+|+++++.++ +..++.|||.|++++|+|+.+...++..|+++++++++.++++++|++.
T Consensus 85 ~~~~~~~~~~~~~I~i--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 160 (403)
T PRK08636 85 KRKYNVDLDPETEVVA--TMGSKEGYVHL--VQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQ 160 (403)
T ss_pred HHHhCCCCCCCCeEEE--CCChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhh
Confidence 88778888887 7988 99999999888 4455789999999999999999999999999999998534468999885
Q ss_pred H----HHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 219 M----IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 219 l----~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
+ ++++++...++++++++|||||||.++|.+++++|+++|++++++||+||+|.++.+++. ...++..+....+
T Consensus 161 l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~ 238 (403)
T PRK08636 161 FFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKD 238 (403)
T ss_pred hhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCccc
Confidence 5 555554334678888899999999999999999999999999999999999999987632 2234444322335
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++++++||||.||+||+|+||+ +++ ++ +++.+.+.......+++.+.|.++..+++..++|
T Consensus 239 ~~i~~~S~SK~~~~~GlRiG~i--v~~-~~----li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~ 299 (403)
T PRK08636 239 VAVESYTLSKSYNMAGWRVGFV--VGN-KK----LVGALKKIKSWLDYGMFTPIQVAATIALDGDQSC 299 (403)
T ss_pred cEEEEEecccccCCccceeeee--eCC-HH----HHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHH
Confidence 7888999999999999999999 765 66 5555555554444577788899888776544444
No 16
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3.8e-40 Score=318.96 Aligned_cols=259 Identities=16% Similarity=0.171 Sum_probs=207.3
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++.|+|+.|.|. . ..++.+.+++..........+|++..|.++||+++|+++...++..++++ +|++ |.|++
T Consensus 32 ~~~i~l~~~~p~-~----~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~i--t~G~~ 104 (389)
T PRK08068 32 HDVINLGQGNPD-Q----PTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAI--LFGGK 104 (389)
T ss_pred CCeEEecCCCCC-C----CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE--cCCcH
Confidence 478999999762 1 22456677766655443446898899999999999999987777778888 7988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.+||.|++++|+|+.|...++..|++++.+|++++.++.+|++++++.+.. +++++++||||||
T Consensus 105 ~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~P~NP 179 (389)
T PRK08068 105 AGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE---KAKLMYLNYPNNP 179 (389)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc---cceEEEEECCCCC
Confidence 998887 44556799999999999999999999999999999996555678899999988863 4668888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|++++++||+||+|.++.+++. ...+.....+..+++++++||||.||++|+|+||+ +++
T Consensus 180 TG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~--~~~ 255 (389)
T PRK08068 180 TGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ--KPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFA--VGN 255 (389)
T ss_pred CCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC--CCcChhhCCCccCCEEEEecchhccCCccceeEeE--ecC
Confidence 99999999999999999999999999999999887531 12232222234468999999999999999999999 654
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.+.......+++.+.|.+++..|...++|
T Consensus 256 -~~----l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 291 (389)
T PRK08068 256 -ES----VIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSC 291 (389)
T ss_pred -HH----HHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHH
Confidence 76 5666666655556677777888888777654444
No 17
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-40 Score=318.21 Aligned_cols=266 Identities=16% Similarity=0.197 Sum_probs=212.0
Q ss_pred HhcCCCC-CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC-CcEEE
Q 017967 77 FKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVAT 154 (363)
Q Consensus 77 ~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~ 154 (363)
++.++-+ +.|+|+.|.+. +..+++.+.+++.+.+......+|++..|.++||+++++++.+.++..+++ ++|++
T Consensus 32 ~~~~~~~~~~i~l~~g~~~----~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i 107 (405)
T PRK06207 32 LRGEPLPGRPVDFSHGDVD----AHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII 107 (405)
T ss_pred hcCCcCCCCceecCCcCCC----CCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE
Confidence 3444433 78999999862 122345666666555533333679989999999999999998877877888 89988
Q ss_pred EeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc---CCCCCCCHHHHHHHHHcCCCCcE
Q 017967 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD---PKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~---~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
|.|+++++.++ +..++.+||+|++++|+|+.+...++..|++++.++++. ++++++|++.+++.++. +++
T Consensus 108 --t~Ga~~al~~~--~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---~~k 180 (405)
T PRK06207 108 --TPGTQGALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA---GVR 180 (405)
T ss_pred --eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh---cCe
Confidence 99999999888 444578999999999999999999999999999999752 23688999999998863 466
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~ 311 (363)
+++++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....+++++++||||.|+++|+
T Consensus 181 ~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl 258 (405)
T PRK06207 181 VFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGY 258 (405)
T ss_pred EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCccc
Confidence 788899999999999999999999999999999999999999988642 122333332235799999999999999999
Q ss_pred cceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 312 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 312 RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
|+||+ +++ ++ +++.+.........+.+.++|.++..+|++.+.|
T Consensus 259 RiG~i--i~~-~~----l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 302 (405)
T PRK06207 259 RLGVA--FGS-PA----IIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGW 302 (405)
T ss_pred ceEEE--EcC-HH----HHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHH
Confidence 99999 665 66 5666666655566678889999999988764444
No 18
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-40 Score=316.39 Aligned_cols=272 Identities=16% Similarity=0.175 Sum_probs=214.9
Q ss_pred CCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCC
Q 017967 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (363)
....+..+....+. .++.++|+.|.+. . + +++.+.++........ ..+|++..|.++||+++++++.+.++.
T Consensus 14 ~~~~~~~~~~~~~~--~~~~i~l~~g~p~-~---~-~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~ 85 (384)
T PRK06348 14 EVNIMAEIATLAKK--FPDIIDLSLGDPD-L---I-TDESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYDL 85 (384)
T ss_pred CccHHHHHHHHHHh--cCCcEEcCCCCCC-C---C-CCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence 33345455444432 2478999999863 1 1 2344544333322222 377999999999999999999887888
Q ss_pred cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
.+++++|++ |+|+++++.++ +..++.+||+|++++|+|.+|...++..|.+++.+++++++++++|++.+++.+++
T Consensus 86 ~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 161 (384)
T PRK06348 86 SFKRNEIMA--TVGACHGMYLA--LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS 161 (384)
T ss_pred CCChhhEEE--cCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc
Confidence 889999988 99999999988 44457899999999999999999999999999999886555678999999998863
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
+++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++ ...++..+....+++|+++||||.
T Consensus 162 ---~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~ 235 (384)
T PRK06348 162 ---KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKD 235 (384)
T ss_pred ---CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhc
Confidence 45567778999999999999999999999999999999999999998763 122343443235789999999999
Q ss_pred cccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
||+||+|+||+ +++ ++ +++.+.........+++.++|.++..+|...++|
T Consensus 236 ~~l~GlRiG~~--v~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 285 (384)
T PRK06348 236 FAMTGWRIGYV--IAP-DY----IIETAKIINEGICFSAPTISQRAAIYALKHRDTI 285 (384)
T ss_pred cCCccccceee--ecC-HH----HHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHH
Confidence 99999999999 776 55 5666766666666688999999999888765554
No 19
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.9e-39 Score=314.74 Aligned_cols=273 Identities=17% Similarity=0.135 Sum_probs=213.5
Q ss_pred CCCCCCchhhHHHHHhc---CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHH
Q 017967 63 TMAPPDPILGVSEAFKA---DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 139 (363)
Q Consensus 63 ~~~~~~~~~~~~~~~~~---~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l 139 (363)
...+.+.+..+...++. ....+.|+|+.|+|. ..+++.+.+++.+.+. . ..+|++..|.++||+++|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~-~-~~~Y~~~~G~~~lr~~ia~~~ 78 (396)
T PRK09147 6 DRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPK-----HPTPAFIKDALAANLD-G-LASYPTTAGLPALREAIAAWL 78 (396)
T ss_pred hcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCC-----CCCCHHHHHHHHHHhh-h-hcCCCCCCCCHHHHHHHHHHH
Confidence 34455566666665543 234589999999962 1235677777666543 2 377999999999999999999
Q ss_pred hcCCCCc-ccCC-cEEEEeccchhHHHHHHHHHHHHhCC---CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCC
Q 017967 140 FGADNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 214 (363)
Q Consensus 140 ~~~~~~~-~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 214 (363)
...++.. ++++ +|++ |.|+++++.++ +..++.| ||.|++++|+|+.|..+++..|++++.+|+++++++++
T Consensus 79 ~~~~g~~~~~~~~~i~i--t~G~~~al~~~--~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~ 154 (396)
T PRK09147 79 ERRYGLPALDPATQVLP--VNGSREALFAF--AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAP 154 (396)
T ss_pred HHHhCCCcCCccceEEE--CCChHHHHHHH--HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCcc
Confidence 8877877 8885 8988 99999999888 4445678 89999999999999999999999999999965556899
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHH-HHH---
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LFA--- 290 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~--- 290 (363)
|++.+++.+.. +++++++||||||||.+++.+++++|+++|++++++||+||+|.++.+++.. ...+.. ...
T Consensus 155 d~~~l~~~~~~---~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~ 230 (396)
T PRK09147 155 DFDAVPAEVWA---RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAA-PPLGLLEAAAELG 230 (396)
T ss_pred CHHHHHHHHhh---ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCC-CCchhhhhccccC
Confidence 99999887763 4667778999999999999999999999999999999999999999876421 111111 111
Q ss_pred -hcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 291 -TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 291 -~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+..+++|+++||||.|+++|+|+||+ +++ ++ +++++.+.......+++.+.|.++...+.
T Consensus 231 ~~~~~~vi~~~S~SK~~~~~GlRiG~~--~~~-~~----l~~~~~~~~~~~~~~~~~~~q~a~~~~~~ 291 (396)
T PRK09147 231 RDDFKRLVVFHSLSKRSNVPGLRSGFV--AGD-AA----LLKKFLLYRTYHGCAMPPAVQAASIAAWN 291 (396)
T ss_pred ccccccEEEEeccccccCCccceeeee--cCC-HH----HHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence 12479999999999999999999999 766 66 55555555444455788899999776664
No 20
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1e-39 Score=315.31 Aligned_cols=260 Identities=19% Similarity=0.173 Sum_probs=209.0
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccch
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (363)
.+++++|+.|.+. ..+++.+.+++.+........+|++..|.++||+++++|+...++..++++ +|++ |+|+
T Consensus 28 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~--t~G~ 100 (383)
T TIGR03540 28 GVDVISLGIGDPD-----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLS--LIGS 100 (383)
T ss_pred CCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEE--CCCc
Confidence 3588999999862 223567777776655433347899999999999999999987777777776 6877 9999
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
++++.++ +..++.+||.|+++.|+|+.+...++..|++++.+|+++++++.+|++.+++.+.+ ++++++++||||
T Consensus 101 ~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~---~~~~v~i~~P~N 175 (383)
T TIGR03540 101 KEGIAHI--PLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK---KAKLMFINYPNN 175 (383)
T ss_pred HHHHHHH--HHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc---cceEEEEeCCCC
Confidence 9999988 44457899999999999999999999999999999986555677899999988763 466888889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+ ++
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~--i~ 251 (383)
T TIGR03540 176 PTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMA--VG 251 (383)
T ss_pred CcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccCEEEEEecccccCCccceeeEE--eC
Confidence 999999999999999999999999999999999987532 22333332222367899999999999999999999 66
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+ ++ +++.+.........+++.+.|.+++.+|++.++|
T Consensus 252 ~-~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 288 (383)
T TIGR03540 252 N-AD----LIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDV 288 (383)
T ss_pred C-HH----HHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHH
Confidence 5 66 5555555555555678889999999988776665
No 21
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.7e-39 Score=314.87 Aligned_cols=260 Identities=18% Similarity=0.153 Sum_probs=211.8
Q ss_pred CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
...++|+|++|+|. ......+++.+.+++.+.+......+|.+..|.++||+++++++...++..+++++|++ |.|+
T Consensus 29 ~~~~~i~l~~G~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMGDPT-AYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI--TSGC 105 (409)
T ss_pred cCCeeeecCCCCCC-cCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE--eCCh
Confidence 33589999999973 11223356788888777665444478999999999999999999887788888999988 9999
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
++++.++. ..++.+||+|++++|+|+.|...++..|++++.+++++++++.+|++.+++.++. +++++++++|||
T Consensus 106 ~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~P~N 180 (409)
T PLN02656 106 TQAIDVAL--SMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ---NTVALVIINPGN 180 (409)
T ss_pred HHHHHHHH--HHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc---CceEEEEECCCC
Confidence 99998884 4446899999999999999998899999999999986455678999999988863 466788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+++++|+++|++++++||+||+|.+|.+++. ...+...+ +...++|+++||||.|++||+|+||+ ++
T Consensus 181 PtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRiG~~--i~ 255 (409)
T PLN02656 181 PCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRWIVPGWRLGWF--VT 255 (409)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhccCcceeEEEE--EE
Confidence 999999999999999999999999999999999998642 22333333 44568999999999999999999999 77
Q ss_pred CC-------hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 321 SS-------SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 321 ~~-------~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ ++ +++.+.+.... +.+++.++|.++..+|++
T Consensus 256 ~~~~~~~~~~~----~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~ 295 (409)
T PLN02656 256 TDPSGSFRDPK----IVERIKKYFDI-LGGPATFIQAAVPTILEQ 295 (409)
T ss_pred eCcccccccHH----HHHHHHHHHhh-hcCCCHHHHHHHHHHHhc
Confidence 53 34 55555554332 457899999999999874
No 22
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.3e-39 Score=317.35 Aligned_cols=263 Identities=17% Similarity=0.195 Sum_probs=209.6
Q ss_pred HhcCCCC-CcEEeeccccCCCCCCccccHHHHHHHHHHHc-----------cCCCCCCCCCcchHHHHHHHHHHHhcCCC
Q 017967 77 FKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-----------RGENKEYLPIEGLAAFNKVTAELLFGADN 144 (363)
Q Consensus 77 ~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-----------~~~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (363)
|++..+| ++|+|+++++ ....+.+.+.+..... ......|.+..|.++||+++|+++.+.++
T Consensus 40 ~~~~~np~g~i~l~~aeN------~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~ 113 (447)
T PLN02607 40 YDESHNPSGVIQMGLAEN------QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRG 113 (447)
T ss_pred CCcccCCCceEEEechhh------hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcC
Confidence 4455666 6999999885 3445666655544321 11224477889999999999999987655
Q ss_pred --CcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 145 --SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 145 --~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
.++++++|++ |+|++++++++ +..++.|||.|+|+.|+|+.|...+. +.|+++++|++++++++.+|++.+++
T Consensus 114 ~~~~v~p~~Ivi--t~G~t~al~~l--~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~ 189 (447)
T PLN02607 114 GKARFDPDRIVL--TAGATAANELL--TFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEA 189 (447)
T ss_pred CCCCcCHHHeEE--cCChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHH
Confidence 3688999988 99999999998 44557899999999999999998887 68999999998655668899999999
Q ss_pred HHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh------c
Q 017967 222 DIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------R 292 (363)
Q Consensus 222 ~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~------~ 292 (363)
++++. ..++++++++|||||||.+++.+++++|+++|+++++++|+||+|.++.+++ .++.++.++.. .
T Consensus 190 a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~~ 267 (447)
T PLN02607 190 AYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKGV 267 (447)
T ss_pred HHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCCC
Confidence 88742 2356778889999999999999999999999999999999999999988864 23455555432 1
Q ss_pred CCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 293 ~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.+++++++||||.||++|+|+||+ ++.+++ +++.++.. ..+..+|.++|.+++.+|++.
T Consensus 268 ~~~v~vi~s~SK~fg~~GlRvG~i--vs~n~~----l~~~~~~~--~~~~~~s~~~q~~~~~~L~d~ 326 (447)
T PLN02607 268 AERVHIVYSLSKDLGLPGFRVGTI--YSYNDK----VVTTARRM--SSFTLVSSQTQHLLASMLSDE 326 (447)
T ss_pred cCcEEEEEcchhcCCCCcceEEEE--EEcCHH----HHHHHHHH--hhcCCCCHHHHHHHHHHhCCc
Confidence 468999999999999999999999 776666 55555544 234468999999999998864
No 23
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-39 Score=315.71 Aligned_cols=263 Identities=17% Similarity=0.165 Sum_probs=211.1
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
..++|+|++|+|. .......++.+.+++.+.+.......|++..|.++||+++++++...++..+++++|++ |+|++
T Consensus 51 ~~~~i~l~~G~P~-~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPS-AFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGCA 127 (430)
T ss_pred CCCeeeCCCCCCC-CCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCHH
Confidence 3479999999873 22223345677777777665433357999999999999999999888888889999988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++++++.. .+..|||+|++++|+|+.|...+...|++++.+++..++++.+|++.+++.+++ ++++++++|||||
T Consensus 128 ~al~l~~~--~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~P~NP 202 (430)
T PLN00145 128 QAIEIIMS--VLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE---NTVAMVIINPNNP 202 (430)
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc---CceEEEEeCCCCC
Confidence 99999843 446799999999999999999999999999999976566789999999988763 5678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|++||+||+|.+|.+++. ...++..+ +...++|+++||||.|++||||+||+ +++
T Consensus 203 tG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pG~RlG~i--v~~ 277 (430)
T PLN00145 203 CGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVF-GEVAPVLTLGSISKRWVVPGWRLGWI--ATC 277 (430)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--Cccchhhh-cccCcEEEEeccccccCCCCeeEEEE--EEe
Confidence 99999999999999999999999999999999988642 23344333 34568999999999999999999999 664
Q ss_pred Ch-hHHHH--HHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 322 SS-DLAAR--VKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 322 ~~-~~~~~--~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ ..++. +++.++... ....+++.+.|.++..+|+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~ 316 (430)
T PLN00145 278 DPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIAN 316 (430)
T ss_pred cchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhc
Confidence 33 22221 344455443 34557889999999888865
No 24
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-39 Score=322.23 Aligned_cols=264 Identities=19% Similarity=0.106 Sum_probs=206.7
Q ss_pred CCcEEeeccccCC---------------CCCCc---------cccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHH
Q 017967 83 EKKLNLGVGAYRT---------------EELQP---------YVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTA 136 (363)
Q Consensus 83 ~~~i~l~~g~~~~---------------~~~~~---------~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia 136 (363)
.++|+|++|+|.+ ...+. ..+..+.++..+.... .....|++..|.++||+++|
T Consensus 46 ~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia 125 (481)
T PTZ00377 46 DSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVA 125 (481)
T ss_pred ceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHH
Confidence 4899999999842 22211 1233445555544422 13367999999999999999
Q ss_pred HHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCC
Q 017967 137 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (363)
Q Consensus 137 ~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (363)
+++.+.++..+++++|++ |+|+++++.++. ..++ .|||.|+++.|+|+.|...++..|.+++.+++++++++++|
T Consensus 126 ~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~--~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d 201 (481)
T PTZ00377 126 AFIERRDGVPKDPSDIFL--TDGASSGIKLLL--QLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLD 201 (481)
T ss_pred HHHHHhcCCCCChhhEEE--cCCHHHHHHHHH--HHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCC
Confidence 999888888899999988 999999999984 3446 69999999999999999999999999999999766678999
Q ss_pred HHHHHHHHHcCC---CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH--
Q 017967 216 FEGMIADIKAAP---GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-- 290 (363)
Q Consensus 216 ~~~l~~~l~~~~---~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-- 290 (363)
++.|++.++... .++++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++. ....++..+.
T Consensus 202 ~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~~~ 280 (481)
T PTZ00377 202 QEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVLLE 280 (481)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHHHh
Confidence 999999987411 1466777789999999999999999999999999999999999999988431 1233433321
Q ss_pred --hc---CCeEEEEEcCccc-cccccccceEEEEee--CChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 291 --TR---GMELLVAQSYSKN-LGLYAERIGAMNVVC--SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 291 --~~---~~~vi~~~S~SK~-~~l~G~RvG~i~~v~--~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.. ..++|+++||||. ++++|||+||+ ++ .+++ +++++.+... ...+++.++|.++..+|+.
T Consensus 281 l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~--~~~~~p~~----li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 281 LPAEYNTDVELVSFHSTSKGIIGECGRRGGYF--ELTNIPPE----VREQIYKLAS-INLCSNVVGQLMTGLMCNP 349 (481)
T ss_pred hcccccCCeEEEEEecCCcccccCCcCceEEE--EEeCCCHH----HHHHHHHHhh-eecCCChHHHHHHHHHhCC
Confidence 11 2379999999997 69999999999 65 2466 5666666553 3457899999999998864
No 25
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.8e-39 Score=318.84 Aligned_cols=263 Identities=16% Similarity=0.164 Sum_probs=206.5
Q ss_pred HhcCCCC-CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-----------CCCCCCCCCcchHHHHHHHHHHHhcCCC
Q 017967 77 FKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----------GENKEYLPIEGLAAFNKVTAELLFGADN 144 (363)
Q Consensus 77 ~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (363)
|+...+| +.|+|+++++ +++.+.+.+.+...... .....|++..|.++||+++|+|+.+.++
T Consensus 31 y~~~~~p~g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~ 104 (468)
T PLN02450 31 YDEIKNPSGIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRG 104 (468)
T ss_pred CCcccCCCeeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhC
Confidence 3444555 7999999986 34445665555443210 1224588889999999999999987655
Q ss_pred C--cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 145 S--VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 145 ~--~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
. .+++++|++ |+|+++++.++ +..++.|||.|++++|+|+.|...+. ..|++++++++++++++.+|++.+++
T Consensus 105 ~~~~v~~~~Iii--t~Ga~~al~~l--~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~ 180 (468)
T PLN02450 105 NKVTFDPNKLVL--TAGATSANETL--MFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEE 180 (468)
T ss_pred CCCCcChHHeEE--ccChHHHHHHH--HHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHH
Confidence 3 478999988 99999999888 45557899999999999999998888 68999999998655678889999999
Q ss_pred HHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-------
Q 017967 222 DIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------- 291 (363)
Q Consensus 222 ~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~------- 291 (363)
++.+. ..+++++++||||||||.+++.+++++|+++|++++++||+||+|.++.+++. ++.+......
T Consensus 181 ~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~ 258 (468)
T PLN02450 181 AYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENT 258 (468)
T ss_pred HHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccC
Confidence 88642 23566778899999999999999999999999999999999999999887642 2334333321
Q ss_pred -cCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 292 -RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 292 -~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
..+++++++||||.||++|+|+||+ +++++. +++.+.+.. .+.++|.++|.+++.+|++.
T Consensus 259 ~~~~~vi~l~S~SK~~~l~GlRiG~l--i~~~~~----l~~~~~~~~--~~~~~s~~~Q~a~~~~L~~~ 319 (468)
T PLN02450 259 DVSNRVHIVYSLSKDLGLPGFRVGAI--YSNDEM----VVSAATKMS--SFGLVSSQTQYLLSALLSDK 319 (468)
T ss_pred CCCCcEEEEEeccccCCCCCccEEEE--EECCHH----HHHHHHHHh--hcCCCCHHHHHHHHHHhCCc
Confidence 2478999999999999999999999 887665 444444442 33467999999999998764
No 26
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2e-39 Score=313.47 Aligned_cols=259 Identities=20% Similarity=0.183 Sum_probs=207.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++.++|+.|.+. ..+++.+.+++.+........+|++..|.++||+++++|+...++..++++ +|++ |.|++
T Consensus 31 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~--t~G~~ 103 (385)
T PRK09276 31 VDVISLGIGDPD-----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVIS--LIGSK 103 (385)
T ss_pred CCEEEecCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccCcH
Confidence 478999999862 223567777777665433336798899999999999999987777777776 5877 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++. ..++.|||.|++++|+|+.|...++..|++++.+++++++++.+|++.+++.+. +++++++++|||||
T Consensus 104 ~~i~~~~--~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~NP 178 (385)
T PRK09276 104 EGIAHIP--LAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPNNP 178 (385)
T ss_pred HHHHHHH--HHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCC
Confidence 9999884 344679999999999999999999999999999998655567789999988776 34667888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+ +++
T Consensus 179 tG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~--i~~ 254 (385)
T PRK09276 179 TGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY--KPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFA--VGN 254 (385)
T ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC--CCCChhccCCCcCCEEEEecchhhcCCcchhheee--eCC
Confidence 99999999999999999999999999999999987532 12333333222467899999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.+.......+++.+.|.++..+|+..+.|
T Consensus 255 -~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 290 (385)
T PRK09276 255 -AD----LIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEV 290 (385)
T ss_pred -HH----HHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHH
Confidence 66 5555655555555677888999998888765555
No 27
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4e-39 Score=319.03 Aligned_cols=275 Identities=16% Similarity=0.151 Sum_probs=209.8
Q ss_pred CCCCchhhHHHHHh-----cCCCC-CcEEeeccccCCCCCCccccHHHHHHHHHHH-----------ccCCCCCCCCCcc
Q 017967 65 APPDPILGVSEAFK-----ADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLML-----------ERGENKEYLPIEG 127 (363)
Q Consensus 65 ~~~~~~~~~~~~~~-----~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-----------~~~~~~~Y~~~~G 127 (363)
.+.++.+..-+.|+ ...+| ++|+|+.+++ ++..+.+.+.+.+.. .......|.+..|
T Consensus 22 ~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN------~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G 95 (496)
T PLN02376 22 GENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAEN------QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHG 95 (496)
T ss_pred CCCCchHHHHHHHhCCCCCcccCCCceEEeecchh------hhhHHHHHHHHHhCchhhccccccccccchhhccCCCCC
Confidence 34444444444443 33455 7999998875 333334333332211 0112246888999
Q ss_pred hHHHHHHHHHHHhcCCC--CcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEE
Q 017967 128 LAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEY 204 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~--~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v 204 (363)
.++||+++|+|+.+.++ ..+++++|++ |+|++++++++ +..++.|||.|++++|+|+.|...++ ..|++++++
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi--t~Ga~~al~~l--~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v 171 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPERVVM--SGGATGANETI--MFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPV 171 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChhhEEE--ccchHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEE
Confidence 99999999999987766 5688999988 99999999998 45567899999999999999999887 689999999
Q ss_pred ecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCC
Q 017967 205 RYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 205 ~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 281 (363)
+++.++++++|++.+++++... ..++++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++.
T Consensus 172 ~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~-- 249 (496)
T PLN02376 172 PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG-- 249 (496)
T ss_pred eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC--
Confidence 9965567899999998775431 23567788899999999999999999999999999999999999999988642
Q ss_pred chhHHHHHHhc-------CCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhc
Q 017967 282 DASSVRLFATR-------GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLS 354 (363)
Q Consensus 282 ~~~~~~~~~~~-------~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~ 354 (363)
++.++..+... .+++++++||||.||+||+|+||+ +++++. +++.++... .+..+|.+.|.+++.
T Consensus 250 ~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~l--i~~~~~----l~~~~~~~~--~~~~vs~~~Q~a~~~ 321 (496)
T PLN02376 250 DFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIV--YSFNDS----VVSCARKMS--SFGLVSSQTQLMLAS 321 (496)
T ss_pred CcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEE--EECCHH----HHHHHHHHh--hcCCCCHHHHHHHHH
Confidence 34455555321 146788999999999999999999 777666 444444433 344689999999999
Q ss_pred ccccc
Q 017967 355 SMNGK 359 (363)
Q Consensus 355 ~l~~~ 359 (363)
+|++.
T Consensus 322 ~L~d~ 326 (496)
T PLN02376 322 MLSDD 326 (496)
T ss_pred HhCCh
Confidence 98754
No 28
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=5.2e-39 Score=321.31 Aligned_cols=281 Identities=20% Similarity=0.151 Sum_probs=216.0
Q ss_pred CCCCCCCCchhhHHHHH---hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHH
Q 017967 61 GVTMAPPDPILGVSEAF---KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 137 (363)
Q Consensus 61 ~v~~~~~~~~~~~~~~~---~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 137 (363)
++....++.+..+.... +.. ..++|+|++|.|.. .+. ..++.+.+++.+.+.. ..+|++..|.++||+++|+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~-g~~~i~l~~G~p~~-~~~-~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReaia~ 196 (517)
T PRK13355 122 KLDNVLYDVRGPVVDEANRMEAA-GTHILKLNIGNPAP-FGF-RTPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAIMQ 196 (517)
T ss_pred HhhccCccHHHHHHHHHHHHHHc-CCCeEEecCcCCCc-CCC-CCCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHHHH
Confidence 44444555444443333 333 24899999998732 122 2345566665554432 2579999999999999999
Q ss_pred HHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHH
Q 017967 138 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 217 (363)
Q Consensus 138 ~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 217 (363)
++...++..+++++|++ |+|+++++.++ +..++.+||.|++++|+|+.|...++..|++++.++++++.+|.+|++
T Consensus 197 ~~~~~~~~~~~~~~I~i--t~G~~eal~~~--~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~ 272 (517)
T PRK13355 197 YAQLKGLPNVDVDDIYT--GNGVSELINLS--MSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDID 272 (517)
T ss_pred HHHhcCCCCCChhHEEE--eCcHHHHHHHH--HHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHH
Confidence 99776666688999988 99999999888 444578999999999999999999999999999999876667899999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEE
Q 017967 218 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (363)
Q Consensus 218 ~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 297 (363)
.+++++. +++++++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.+++. ...++..+ .....++
T Consensus 273 ~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~-~~~~~vi 346 (517)
T PRK13355 273 DIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASL-APDLFCV 346 (517)
T ss_pred HHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHh-CCCCeEE
Confidence 9999886 3567888899999999999999999999999999999999999999998642 23344443 2233578
Q ss_pred EEEcCccccccccccceEEEEeeC-ChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 298 VAQSYSKNLGLYAERIGAMNVVCS-SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 298 ~~~S~SK~~~l~G~RvG~i~~v~~-~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+++||||.|+++|||+||+ +++ +++.++.+++.+.... ....+++.++|.++..+|...
T Consensus 347 ~~~S~SK~~~~~G~RiG~~--i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~ 406 (517)
T PRK13355 347 TFSGLSKSHMIAGYRIGWM--ILSGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGH 406 (517)
T ss_pred EEecchhhccCcccceEEE--EeeCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCC
Confidence 8899999999999999999 653 3444445666665443 344578899999998888653
No 29
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=7.7e-39 Score=313.54 Aligned_cols=262 Identities=15% Similarity=0.098 Sum_probs=205.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++++|++|+|. ... ..+++.+.+++.+.......++|.+..|.++||+++++|+...++..+++++|++ |+|++++
T Consensus 33 ~~~~~~~G~p~-~~~-~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G~~~a 108 (433)
T PRK06855 33 KITWENIGDPI-AKG-EKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNGLGDA 108 (433)
T ss_pred cccccccCCCc-ccC-CCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCcHHHH
Confidence 68999999873 111 2345667777666654334478999999999999999999888888899999988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
+.++. .++.|||.|++++|+|+.|.... ...|++++.+++++++++++|++.|++.++..+ ++++++++||||||
T Consensus 109 l~~~~---~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~i~l~~P~NPT 184 (433)
T PRK06855 109 IAKIY---GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNP-SIAGILLINPDNPT 184 (433)
T ss_pred HHHHH---HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCC-CceEEEEECCCCCC
Confidence 88873 35789999999999999987553 356889999998655678899999999987422 35677788999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+.. ..++|+++||||.|++||+|+||+ ++++
T Consensus 185 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~i--i~p~ 259 (433)
T PRK06855 185 GAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWI--EVYN 259 (433)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC-cCCeEEEecCccccCCCcceEEEE--EEeC
Confidence 9999999999999999999999999999999988642 2344444432 246899999999999999999999 7642
Q ss_pred ---hhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 323 ---SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 323 ---~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+..+..+.+.+..... ...+++.+.|.++..+|++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~ 298 (433)
T PRK06855 260 ADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHP 298 (433)
T ss_pred CchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCC
Confidence 2223334454544333 34468899999999998765
No 30
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4.2e-39 Score=313.05 Aligned_cols=259 Identities=15% Similarity=0.134 Sum_probs=203.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++.|+|+.|.|. ..+++.+.+++.+........+|++..|.++||+++|+++...++..++++ +|++ |.|++
T Consensus 30 ~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G~~ 102 (405)
T PRK09148 30 ADIIDLGMGNPD-----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVA--TLGSK 102 (405)
T ss_pred CCeEEcCCCCCC-----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChH
Confidence 478999998862 223556666666655333347899999999999999999977667777887 8988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.+++ ..++.+||+|++++|+|+.|...++..|++++.++++++..+ ++.+++.++...++++++++++||||
T Consensus 103 ~al~~~~--~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~---~~~l~~~~~~~~~~~~~v~l~~P~NP 177 (405)
T PRK09148 103 EGFANMA--QAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF---FPALERAVRHSIPKPIALIVNYPSNP 177 (405)
T ss_pred HHHHHHH--HHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC---ccCHHHHHhhccccceEEEEeCCCCC
Confidence 9999884 445679999999999999999999999999999998543333 45555555533345778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+....+++++++||||.||+||+|+||+ +++
T Consensus 178 tG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~--v~~ 253 (405)
T PRK09148 178 TAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN--PPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFA--VGN 253 (405)
T ss_pred CCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCC--CCCChhhCCCccCcEEEEeccccccCCcchheeee--eCC
Confidence 99999999999999999999999999999999987531 22233333222357889999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.+.......+++.++|.++..+|+..++|
T Consensus 254 -~~----~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~ 289 (405)
T PRK09148 254 -ER----LIAALTRVKSYLDYGAFTPIQVAATAALNGPQDC 289 (405)
T ss_pred -HH----HHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHH
Confidence 66 5666666655555678899999999998765554
No 31
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1e-38 Score=310.12 Aligned_cols=276 Identities=14% Similarity=0.182 Sum_probs=217.2
Q ss_pred CchhhHHHHHhcCCC--CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCC
Q 017967 68 DPILGVSEAFKADTD--EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (363)
Q Consensus 68 ~~~~~~~~~~~~~~~--~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (363)
+++..+.+.++.+.+ .+.++|++|.|. ..+...+.+.+.+++.+........+|.+..|.++||+++++++... +.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~ 91 (401)
T TIGR01264 14 NPIRAIVDNMKVKPNPEKPMIKLSIGDPT-VFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DG 91 (401)
T ss_pred hHHHHHHHHHHhhhhcCCCeeecCCCCCC-CcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CC
Confidence 345566666666544 367999999973 22223456778888777665443367999999999999999998764 55
Q ss_pred cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
.+++++|++ |+|+++++.++. ..++.+||+|++++|+|..|...++..|++++.++++.++++++|++.+++.++.
T Consensus 92 ~~~~~~i~~--t~G~~~al~~~~--~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~ 167 (401)
T TIGR01264 92 PIEADDVVL--CSGCSHAIEMCI--AALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE 167 (401)
T ss_pred CCCHHHEEE--CcChHHHHHHHH--HHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc
Confidence 688999988 999999998884 3446799999999999999999999999999999986555789999999988763
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
++.+++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. ...++..+ ....++|+++||||.
T Consensus 168 ---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~ 241 (401)
T TIGR01264 168 ---KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASL-SSTVPILSCGGLAKR 241 (401)
T ss_pred ---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHc-CCCCcEEEEccCccc
Confidence 356778899999999999999999999999999999999999999987642 23344444 223369999999999
Q ss_pred cccccccceEEEEeeCCh-hHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 306 LGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~-~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+++|+|+||+ +++++ +.+..+++.+..+.. ...+++.++|.++..+|.+
T Consensus 242 ~~~~GlRiG~i--v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~ 292 (401)
T TIGR01264 242 WLVPGWRLGWI--IIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLR 292 (401)
T ss_pred CCCccceEEEE--EecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHh
Confidence 99999999999 77642 233345666655543 3457889999999888864
No 32
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=310.21 Aligned_cols=271 Identities=18% Similarity=0.212 Sum_probs=218.7
Q ss_pred CCCCCCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHH
Q 017967 62 VTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 139 (363)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l 139 (363)
+....+.++.++....... ..+++++|+.|.+. ..+++.+.+++.+.+.... .+|.+..|.+++|+++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~ 82 (387)
T PRK08960 9 SRDIEPFHVMALLARANELEAAGHDVIHLEIGEPD-----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAGFY 82 (387)
T ss_pred HHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHHHH
Confidence 3344556666666544321 23478999999862 2246778888777664333 67999999999999999999
Q ss_pred hcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHH
Q 017967 140 FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM 219 (363)
Q Consensus 140 ~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 219 (363)
...++..+++++|++ |.|+++++.++. ..++.+||+|++++|+|+.+...++..|.+++.++++++.++.+|++.+
T Consensus 83 ~~~~g~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 158 (387)
T PRK08960 83 AQRYGVDVDPERILV--TPGGSGALLLAS--SLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALV 158 (387)
T ss_pred HHHhCCCCChhhEEE--ccCcHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHH
Confidence 877788888999988 999999999984 3446899999999999999999999999999999986555678999999
Q ss_pred HHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE
Q 017967 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (363)
Q Consensus 220 ~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 299 (363)
++.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..+. ....++++++
T Consensus 159 ~~~~~~---~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~---~~~~---~~~~~~vi~~ 229 (387)
T PRK08960 159 ERHWNA---DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD---AASV---LEVDDDAFVL 229 (387)
T ss_pred HHHhCc---cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC---CCCh---hhccCCEEEE
Confidence 998763 466778899999999999999999999999999999999999999987531 2232 2345789999
Q ss_pred EcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 300 ~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+||||.||++|+|+||+ +++ ++ +++.++++......+++.+.|.++..+|.+
T Consensus 230 ~S~SK~~g~~GlRiG~~--~~~-~~----~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 281 (387)
T PRK08960 230 NSFSKYFGMTGWRLGWL--VAP-PA----AVPELEKLAQNLYISASTPAQHAALACFEP 281 (387)
T ss_pred eecccccCCcccEEEEE--EcC-HH----HHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence 99999999999999999 776 55 566666666666678899999999888754
No 33
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=6.5e-39 Score=309.22 Aligned_cols=257 Identities=18% Similarity=0.171 Sum_probs=208.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++.|+|+.|+|. .. +++.+.+++.+..... ..+|.+..|.++||+++|+++.+.++..++++ +|++ |+|++
T Consensus 20 ~~~i~l~~~~~~-~~----~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEPD-FV----TPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGAS 91 (378)
T ss_pred CCeEEeCCCCCC-CC----CCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 378999999973 11 2445666665555433 36798899999999999999987777777775 7988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.|||.|++++|+|+.|...++..|.+++.++++.++++++|++.+++++.+ +++++++++||||
T Consensus 92 ~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~NP 166 (378)
T PRK07682 92 QALDVA--MRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA---KTKAILLCSPNNP 166 (378)
T ss_pred HHHHHH--HHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc---ccEEEEEECCCCC
Confidence 999988 44457799999999999999999999999999999985445689999999998863 4667778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++++++|+||+|.++.+++. ..++..+.+..+++++++||||.||++|+|+||+ +++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~--~~~ 241 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA---YTSFASIKGMRERTILISGFSKGFAMTGWRLGFI--AAP 241 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC---CCChhhcccccCCEEEEecCcccccChhhhhhhh--hcC
Confidence 99999999999999999999999999999999998641 2233344334578999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.........+++.+.|.++..+|++.+.|
T Consensus 242 -~~----~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 277 (378)
T PRK07682 242 -VY----FSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDD 277 (378)
T ss_pred -HH----HHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHH
Confidence 66 5555555544555688999999999998776554
No 34
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-39 Score=310.40 Aligned_cols=253 Identities=17% Similarity=0.158 Sum_probs=204.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCc-ccCC-cEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQ-RVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~-~~~~-~i~~~~t~ggt 161 (363)
++|+|++|+|. . .+++.+.+++...........|+ ..|.++||+++|+++...++.. ++++ +|++ |+|++
T Consensus 45 ~~i~L~~g~p~-~----~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t~Gs~ 116 (410)
T PRK06290 45 ELIDMGVGEPD-E----MADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--SIGSK 116 (410)
T ss_pred CeEEcCCCCCC-C----CCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--ccCHH
Confidence 68999999973 1 13456666665544322335685 4899999999999998877777 8886 7988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.+||.|+++.|+|+.|...++..|++++.++++++.++.+|++.+++.+.. ++++++++|||||
T Consensus 117 ~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~nP~NP 191 (410)
T PRK06290 117 PALAML--PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE---KAKLLYLNYPNNP 191 (410)
T ss_pred HHHHHH--HHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc---cceEEEEECCCCC
Confidence 999888 34456799999999999999999999999999999997555678899999988863 4678888899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|++++++||+||+|.++.+++. ..++..+.+..+++|+++||||.||++|+|+||+ +++
T Consensus 192 TG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~i--i~~ 266 (410)
T PRK06290 192 TGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFV--VGN 266 (410)
T ss_pred CCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCCccccEEEEeechhhcCCchhheEeE--EeC
Confidence 99999999999999999999999999999999987531 2233333233467899999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++ +++.+......+..+++.++|.++..+|++.
T Consensus 267 -~~----l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~ 299 (410)
T PRK06290 267 -EL----IVKAFATVKDNNDSGQFIAIQKAGIYALDHP 299 (410)
T ss_pred -HH----HHHHHHHHHhccccCCcHHHHHHHHHHhhCc
Confidence 66 5666666666666788889999998888753
No 35
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-39 Score=311.19 Aligned_cols=258 Identities=17% Similarity=0.161 Sum_probs=204.0
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCc-EEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~-i~~~~t~ggt 161 (363)
+++++|+.|.|. . + +++.+.++............|++..|.++||+++|+|+...++..+++++ |++ |.|++
T Consensus 35 ~~~i~l~~g~p~---~-~-~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~G~~ 107 (394)
T PRK05942 35 LDLIDLGMGNPD---G-A-APQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LLGSK 107 (394)
T ss_pred CCeEEcCCCCCC---C-C-CCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--ccChH
Confidence 368999999763 1 1 23434444333332333378999999999999999999877777778874 877 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.|||+|++++|+|+.+...+...|++++.++++.++++++|++.+++.+. +++++++++|||||
T Consensus 108 ~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~NP 182 (394)
T PRK05942 108 EGLTHL--ALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSNP 182 (394)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCCC
Confidence 999988 4445789999999999999999999999999999998655567899999998886 35678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+.+..+.+++++||||.||++|+|+||+ +++
T Consensus 183 tG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i--~~~ 258 (394)
T PRK05942 183 TTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFV--VGN 258 (394)
T ss_pred CCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeee--ecC
Confidence 99999999999999999999999999999999987542 12233333222456899999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
++ +++.++........+++.++|.++..+|+..++
T Consensus 259 -~~----l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 293 (394)
T PRK05942 259 -RH----IIQGLRTLKTNLDYGIFSALQKAAETALQLPDS 293 (394)
T ss_pred -HH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHH
Confidence 66 566666665555567888999999888865443
No 36
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=6.8e-39 Score=309.62 Aligned_cols=256 Identities=14% Similarity=0.192 Sum_probs=208.7
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC-CcEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (363)
++.|+|+.|.+. ..+++.+.+++.+...... .+|.+..|.++||+++++++...+|..+++ ++|++ |.|++
T Consensus 29 ~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~i--t~g~~ 100 (384)
T PRK12414 29 HDALNLSQGAPN-----FAPDPALVEGVARAMRDGH-NQYAPMAGIAALREALAEKTERLYGARYDPASEVTV--IASAS 100 (384)
T ss_pred CCeEEcCCCCCC-----CCCCHHHHHHHHHHHHhCC-CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ECChH
Confidence 478999999862 2236677777766554333 679999999999999999987777776665 68988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++++ +++.+|++.+++.++ +++++++++|||||
T Consensus 101 ~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~---~~~~~v~i~~p~NP 174 (384)
T PRK12414 101 EGLYAA--ISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAIT---PRTRMIIVNTPHNP 174 (384)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcC---cccEEEEEcCCCCC
Confidence 999888 445578999999999999999999999999999999853 457899999999886 24667788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++++++|+||+|.++.+++. ...++..+.+..+++++++||||.||++|+|+||+ +++
T Consensus 175 TG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~--v~~ 250 (384)
T PRK12414 175 SATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA--RHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYC--LAP 250 (384)
T ss_pred CCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC--CccCcccCcCccCcEEEEecccccccCccceEEEE--ecC
Confidence 99999999999999999999999999999999988642 12233222223468999999999999999999999 776
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
++ +++++.+.......+++.++|.++..+|.+.+.
T Consensus 251 -~~----l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~ 285 (384)
T PRK12414 251 -AE----LMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS 285 (384)
T ss_pred -HH----HHHHHHHHHhheecCCCcHHHHHHHHHhcCChH
Confidence 56 566676666556678999999999998876543
No 37
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-38 Score=309.93 Aligned_cols=275 Identities=16% Similarity=0.164 Sum_probs=213.8
Q ss_pred hhhHHHHHhc-CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCC-----
Q 017967 70 ILGVSEAFKA-DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD----- 143 (363)
Q Consensus 70 ~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~----- 143 (363)
+......+.. ...+++|+|+.|.|. .+....+++.+.+++.+.+......+|++..|.++||+++|+++...+
T Consensus 19 ~~~~~~~~~~~~~~~~~i~l~~g~p~-~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~ 97 (412)
T PTZ00433 19 LRTVTDNAKPSPSPKSIIKLSVGDPT-LDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKES 97 (412)
T ss_pred HHHHHHhhccCCCCCCeeecCCcCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhcccccc
Confidence 3333444443 244589999999973 221123567888887776654334789989999999999999987543
Q ss_pred -CCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHH
Q 017967 144 -NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 144 -~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
+..+++++|++ |+|+++++.++. ..++.+||+|+++.|+|..|...++..|++++.+++++++++++|++.+++.
T Consensus 98 ~~~~~~~~~i~i--t~G~~~al~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~ 173 (412)
T PTZ00433 98 LKSTIKKDNVVL--CSGVSHAILMAL--TALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL 173 (412)
T ss_pred ccCCCChhhEEE--eCChHHHHHHHH--HHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHH
Confidence 45688999988 999999999984 4446799999999999999999999999999999986556789999999988
Q ss_pred HHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
++. ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. ...++..+ ....++++++||
T Consensus 174 ~~~---~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~Sf 247 (412)
T PTZ00433 174 VDD---RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADF-DTTVPRVILGGT 247 (412)
T ss_pred hcc---CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--Cccchhhc-cCCCceEEEccc
Confidence 763 456777899999999999999999999999999999999999999987642 22344444 223468999999
Q ss_pred ccccccccccceEEEEeeCCh-hHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~-~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
||.||++|+|+||+ +++++ ...+.+++.+.+... ...+++.++|.+++.+|..
T Consensus 248 SK~~~~pGlRlG~~--i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 248 AKNLVVPGWRLGWL--LLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLN 301 (412)
T ss_pred hhhcCCCCeeEEEE--EEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhc
Confidence 99999999999999 65222 112236666665543 3458999999999888764
No 38
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.5e-38 Score=306.65 Aligned_cols=272 Identities=16% Similarity=0.102 Sum_probs=210.8
Q ss_pred CCCCchhhHHHHHhcC---CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhc
Q 017967 65 APPDPILGVSEAFKAD---TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~ 141 (363)
.+.+++..+...+... ...+.++|+.|+|. ..+++.+.+++.+... . ...|++..|.++||+++|+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~-----~~~~~~~~~a~~~~~~-~-~~~Y~~~~G~~~lr~aia~~~~~ 79 (393)
T TIGR03538 7 LQPYPFEKLAALLAGVTPPASKPPIALSIGEPK-----HPTPAFVLEALRENLH-G-LSTYPTTKGLPELRQAIARWLER 79 (393)
T ss_pred CCccHHHHHHHHHHhhhhhcCCCeEEecCCCCC-----CCCCHHHHHHHHHHhh-c-cCCCCCCCCCHHHHHHHHHHHHH
Confidence 3444555555555322 34589999999973 1235677777776543 2 37799999999999999999988
Q ss_pred CCCCc--ccCC-cEEEEeccchhHHHHHHHHHHHHhCCCCE--EEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 142 ADNSV--LKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAK--VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 142 ~~~~~--~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~gd~--Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
.++.. ++++ +|++ |+|+++++.++ +..++.|||. |++++|+|+.|...++..|++++.+++++++++.+|+
T Consensus 80 ~~~~~~~~~~~~~i~i--t~Ga~~al~~~--~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 155 (393)
T TIGR03538 80 RFDLPTGVDPERHVLP--VNGTREALFAF--AQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDF 155 (393)
T ss_pred hhCCcccCCCCceEEE--CCCcHHHHHHH--HHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCH
Confidence 76665 6774 7988 99999999988 3445789986 9999999999999999999999999996555678999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHH-HHHH----h
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV-RLFA----T 291 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~----~ 291 (363)
+.+++++.+ ++++++++|||||||.+++.+++++|+++|++++++||+||+|.++.+++.. ...+. ..+. +
T Consensus 156 ~~l~~~~~~---~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~~~ 231 (393)
T TIGR03538 156 DAVPESVWR---RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGN-PPAGLLQAAAQLGRD 231 (393)
T ss_pred HHHHHHHhh---cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCC-CCcCHHHhccccccc
Confidence 999988863 4567778999999999999999999999999999999999999999875311 11121 1111 1
Q ss_pred cCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
..+++|+++||||.|+++|+|+||+ +++ ++ +++++.+.......+++.+.|.++...+..
T Consensus 232 ~~~~vi~i~S~SK~~~~~GlRvG~~--i~~-~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 291 (393)
T TIGR03538 232 DFRRCLVFHSLSKRSNLPGLRSGFV--AGD-AE----ILKAFLRYRTYHGCAMPIPTQLASIAAWND 291 (393)
T ss_pred ccccEEEEecchhhcCCcccceEEE--ecC-HH----HHHHHHHHHHhhccCcCHHHHHHHHHHhcC
Confidence 3468999999999999999999999 766 66 455555554444557889999998776643
No 39
>PLN02231 alanine transaminase
Probab=100.00 E-value=7.8e-38 Score=311.66 Aligned_cols=262 Identities=16% Similarity=0.105 Sum_probs=203.4
Q ss_pred CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHc--cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE--RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
..++.|+|+.|.+ .++.+.+.++...+.. .....+|++..|.++||+++|+++.+.++..+++++|++ |.
T Consensus 127 ~~p~~i~~~~~~~------~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~ 198 (534)
T PLN02231 127 DHPSLLDKSETHG------LFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD 198 (534)
T ss_pred cCCccCCCCCccc------cCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence 3357788875432 2334555555443322 223477999999999999999999888888999999988 99
Q ss_pred chhHHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcEEEE
Q 017967 159 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILL 234 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~ 234 (363)
|+++++.++.. .++. +||.|+++.|+|+.|...++..|.+++.++++++++|++|++.|++.+++.. .++++++
T Consensus 199 Ga~~ai~~~~~--~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMMMQ--LLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHHHH--HhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 99999999843 3353 7999999999999999999999999999999765678999999999987521 1466777
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh------cCCeEEEEEcCcccc-c
Q 017967 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGMELLVAQSYSKNL-G 307 (363)
Q Consensus 235 i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~------~~~~vi~~~S~SK~~-~ 307 (363)
++|||||||.+++.+++++|+++|+++|++||+||+|+++.|++. ....++..+.. ...++++++||||.+ |
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g 355 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG 355 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCccccc
Confidence 899999999999999999999999999999999999999998531 22334444421 123699999999975 8
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++|+|+||+.+...+++ +++++.+... ...+++.++|.++..+++.
T Consensus 356 ~pGlRiGy~~~~~~~~~----l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~ 401 (534)
T PLN02231 356 ECGKRGGYMEVTGFTSD----VREQIYKVAS-VNLCSNISGQILASLVMSP 401 (534)
T ss_pred CCccceEEEEEecCCHH----HHHHHHHHHh-hhcCCChHHHHHHHHHhCC
Confidence 99999999933323577 5555555543 3457788899988887754
No 40
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.4e-38 Score=304.47 Aligned_cols=251 Identities=18% Similarity=0.260 Sum_probs=207.2
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+++++|+.|.+. ..+++.+.+++.+...... ..|.+..|.++||+++|+++...++..+++++|++ |.|++
T Consensus 29 ~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~~ 100 (388)
T PRK07337 29 GRDIIHMGIGEPD-----FTAPEPVVEAAARALRRGV-TQYTSALGLAPLREAIAAWYARRFGLDVAPERIVV--TAGAS 100 (388)
T ss_pred CCCEEEeCCcCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEE--ecCcH
Confidence 3589999999862 1234566677666554333 67988999999999999999887788888999988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++. ..++.+||+|++++|+|+.+...++..|++++.++++.++++++|++.+++.+. ++++++++++||||
T Consensus 101 ~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 175 (388)
T PRK07337 101 AALLLAC--LALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNP 175 (388)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCC
Confidence 9999884 344679999999999999999999999999999998655578999999999886 34667788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++++++|+||+|.++.+++. ..+. ....+++++++||||.||++|+|+||+ +++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~---~~~~~~vi~~~S~SK~~~~~G~RiG~~--~~~ 247 (388)
T PRK07337 176 TGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVSA---LSLGDDVITINSFSKYFNMTGWRLGWL--VVP 247 (388)
T ss_pred CCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcCh---hhccCCEEEEEechhhcCCchhheeee--ecC
Confidence 99999999999999999999999999999999987532 1222 233578999999999999999999999 776
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+.........+++.++|.++..++.+
T Consensus 248 -~~----l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 279 (388)
T PRK07337 248 -EA----LVGTFEKLAQNLFICASALAQHAALACFEP 279 (388)
T ss_pred -HH----HHHHHHHHHHHhccCCChHHHHHHHHHhcc
Confidence 55 566666666666678899999999888764
No 41
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=6e-38 Score=303.34 Aligned_cols=278 Identities=17% Similarity=0.147 Sum_probs=217.7
Q ss_pred CCCCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhc
Q 017967 64 MAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (363)
Q Consensus 64 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~ 141 (363)
...+..+.++.+.+... ...+.++|+.|.+. ..+++.+.+++.+.........|.+..|.++||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (386)
T PRK07550 8 ALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPG-----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR 82 (386)
T ss_pred hcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 33444566665554322 23478999999863 123566777766655333346798899999999999999988
Q ss_pred CCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
.++..+++++|++ |.|+++++.+++ ..++.+||+|++++|+|..+...++..|++++.++++++.++.+|++.+++
T Consensus 83 ~~g~~~~~~~i~~--t~G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~ 158 (386)
T PRK07550 83 LYGAAISPEQVHI--TSGCNQAFWAAM--VTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEA 158 (386)
T ss_pred HhCCCCCcceEEE--ecCcHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHH
Confidence 8888888999988 999999998884 334679999999999999999999999999999999654567789999999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
.+++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.++.. ...+.....+..+++++++|
T Consensus 159 ~~~~---~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S 233 (386)
T PRK07550 159 LITP---RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADPDWDDTLVHLYS 233 (386)
T ss_pred Hhcc---cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCCCccccEEEEec
Confidence 8874 355666679999999999999999999999999999999999999976421 11122211123568999999
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
|||.||++|+|+||+ +++ ++ +++++.........++|.++|.+++.+|+..++|
T Consensus 234 ~SK~~g~~G~RiG~i--~~~-~~----~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 287 (386)
T PRK07550 234 FSKSYALTGHRVGAV--VAS-PA----RIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADW 287 (386)
T ss_pred chhhccCcccceEee--ecC-HH----HHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHH
Confidence 999999999999999 765 55 5666666666667788999999999988765555
No 42
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.2e-37 Score=301.70 Aligned_cols=258 Identities=18% Similarity=0.204 Sum_probs=209.0
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC-CcEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (363)
++.|+|+.|.+. ..+++.+.++..+...... ..|.+..|.++||+++++++...++..+++ ++|++ |+|++
T Consensus 30 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~i--t~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEPD-----FTTPDHVKEAAKRAIDANQ-SHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILV--TIGAT 101 (391)
T ss_pred CCeEEcCCCCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 479999999873 2235677777776654333 569899999999999999998777777664 78988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++++++ +..++.+||.|++++|+|.++..+++..|++++.++.+ ++++.+|++.+++++...+++++++++++||||
T Consensus 102 ~al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NP 178 (391)
T PRK07309 102 EALSAS--LTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEMLEKAILEQGDKLKAVILNYPANP 178 (391)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHHHHHHhhccCCCeEEEEEECCCCC
Confidence 999998 44557799999999999999999999999999999974 345789999999998754345678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ ..+++++++||||.||++|+|+||+ +++
T Consensus 179 tG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~--v~~ 252 (391)
T PRK07309 179 TGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLI--FAP 252 (391)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh--ccCCEEEEecChhhccCccceeEEE--EeC
Confidence 99999999999999999999999999999999998532 22333333 2378999999999999999999999 776
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.........+++.++|.++..+|++.+.|
T Consensus 253 -~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 288 (391)
T PRK07309 253 -AE----FTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDD 288 (391)
T ss_pred -HH----HHHHHHHHHhhcccCCChHHHHHHHHHHhCChhH
Confidence 66 4555555444455688999999999998765443
No 43
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-38 Score=301.45 Aligned_cols=266 Identities=14% Similarity=0.068 Sum_probs=201.6
Q ss_pred CchhhHHHHHhcCCC---CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCC
Q 017967 68 DPILGVSEAFKADTD---EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (363)
Q Consensus 68 ~~~~~~~~~~~~~~~---~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (363)
.++..+.+.+..... .++++|+.|+|. . .+++.+.+++.+... ....|++..|.++||+++|+++...++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~-~----~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g 78 (374)
T PRK05839 6 YPFEKLRELLKEITPNKEYKGLDLTIGEPQ-F----ETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFK 78 (374)
T ss_pred chHHHHHHHHHHhhhcCCCCeEEcCCCCCC-C----CCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 344444444432222 389999999873 1 124667777665442 236798899999999999999988888
Q ss_pred CcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
..+++++|++ |+|+++++.++..++....+||.|+++.|+|+.|...++..|+++++++++.++++.+|++..+ +.
T Consensus 79 ~~~~~~~I~i--t~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~~ 154 (374)
T PRK05839 79 IELKENELIP--TFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--LQ 154 (374)
T ss_pred CCCCcceEEE--ecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--hc
Confidence 8889999988 9999999887743221114789999999999999999999999999999865555666654432 22
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-----hcCCeEEEE
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-----TRGMELLVA 299 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-----~~~~~vi~~ 299 (363)
+++++++||||||||.+++.+++++|+++|+++|++||+||+|.++.++. ...++.... ...+++|++
T Consensus 155 ----~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi~~ 227 (374)
T PRK05839 155 ----EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVLVI 227 (374)
T ss_pred ----cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEEEE
Confidence 35677779999999999999999999999999999999999999987542 122322221 133799999
Q ss_pred EcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 300 ~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+||||.|++||+|+||+ +++ ++ +++++.........+++.+.|.++...|..
T Consensus 228 ~SfSK~~~~~GlRiG~i--i~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 279 (374)
T PRK05839 228 NSISKRSSAPGLRSGFI--AGD-AS----ILKKYKAYRTYLGCASPLPLQKAAAVAWLD 279 (374)
T ss_pred eccccccCCccceeEEE--ecC-HH----HHHHHHHHHhhcCCCCChHHHHHHHHHhcc
Confidence 99999999999999999 765 66 556666555444567889999988876653
No 44
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-38 Score=304.29 Aligned_cols=259 Identities=20% Similarity=0.247 Sum_probs=212.6
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+++++|+.|.|. ..+++.+.+++.+...... .+|.+..|.++||+++++++.+.++..+++++|++ |.|++
T Consensus 32 ~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G~~ 103 (402)
T PRK06107 32 GRSIVDLTVGEPD-----FDTPDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGGAK 103 (402)
T ss_pred cCCEEEcCCCCCC-----CCCCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHH
Confidence 3478999999973 1235667777777664433 67999999999999999999877788888999988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+|+.++ +...+.+||+|++++|+|..|...+...|.+++.++++.++++.+|++.+++.+. ++++++++++||||
T Consensus 104 ~al~~~--~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 178 (402)
T PRK06107 104 QAIFLA--LMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNP 178 (402)
T ss_pred HHHHHH--HHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCC
Confidence 999988 4455779999999999999999999989998888888544567899999999876 34667777999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-CCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCccccccccccceEEEEe
Q 017967 242 TGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||.+++.+++++|+++|+++ ++++|+||+|.++.+++. ..+++..+. +..+++++++||||.||+||+|+||+ +
T Consensus 179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~--~ 254 (402)
T PRK06107 179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYA--A 254 (402)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcCccCCEEEEeccchhhcCcccceeee--e
Confidence 99999999999999999998 999999999999987642 233443332 22468999999999999999999999 7
Q ss_pred eCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 320 CSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ ++ +++.+.........+++.++|.++..+|+..+.|
T Consensus 255 ~~-~~----~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 292 (402)
T PRK06107 255 GP-AD----LIAAINKLQSQSSSCPSSISQAAAAAALNGDQSF 292 (402)
T ss_pred cC-HH----HHHHHHHHHHhcccCCChHHHHHHHHHhcCChHH
Confidence 66 66 5666777766667789999999999998765555
No 45
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-38 Score=308.15 Aligned_cols=255 Identities=16% Similarity=0.208 Sum_probs=216.6
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHc---cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE---RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~---~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+..++|+.|.+. ...++...+++....... ......|.+..|.++||+++++++....|..+++++|++ |.
T Consensus 88 ~~~~i~f~~g~p~---~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T~ 162 (459)
T COG1167 88 DPSVIDFAGGLPD---PSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--TS 162 (459)
T ss_pred CCceecCCCCCCC---cccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--eC
Confidence 3689999999863 234456777777766652 221477888899999999999999878899999999998 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
|+++|++++.++ ++.|||+|++++|+|.....+++..|+++++||++ +.|+|+|.|++.++.. +.+.+|++++.
T Consensus 163 G~q~al~l~~~~--l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~~ 236 (459)
T COG1167 163 GAQQALDLLLRL--LLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPTF 236 (459)
T ss_pred CHHHHHHHHHHH--hCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCCC
Confidence 999999998443 46699999999999999999999999999999995 4599999999999864 45789999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~ 318 (363)
|||||.+||.+++++|+++|+++|++||+||.|.+|.++..+ .+++.. .+..++||+++||||++. ||+|+||+
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p--~~~l~~-ld~~~rViy~gSFSK~l~-PglRlG~v-- 310 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPP--PPPLKA-LDAPGRVIYLGSFSKTLA-PGLRLGYV-- 310 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCC--CCChHh-hCCCCCEEEEeeehhhcc-cccceeee--
Confidence 999999999999999999999999999999999999998532 223333 356789999999999996 99999999
Q ss_pred eeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 319 VCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 319 v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++| ++ +++++...+.....+++.+.|.+++..|.+
T Consensus 311 v~p-~~----~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~ 345 (459)
T COG1167 311 VAP-PE----LIEKLLRLKQAADLGPSSLSQAALAAFLLS 345 (459)
T ss_pred eCC-HH----HHHHHHHHHHHhcCCCChHHHHHHHHHHHc
Confidence 877 56 677777777788889999999999988773
No 46
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=9.9e-38 Score=301.82 Aligned_cols=256 Identities=16% Similarity=0.195 Sum_probs=207.8
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++.|+|+.|.|. ..+++.+.+++.+...... .+|++..|.++||+++++++...++..++++ +|++ |.|++
T Consensus 28 ~~~i~l~~~~p~-----~~~~~~~~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~--t~G~~ 99 (387)
T PRK07683 28 DNLISLTIGQPD-----FPTPSHVKEAAKRAITENY-TSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIV--TIGAS 99 (387)
T ss_pred CCeEEecCCCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 478999999862 2235677777777664433 6798899999999999999987777778888 9988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+|+.++. ..++.+||.|+++.|+|..|...++..|++++.++.+ ++++.+|++.+++.++. +++++++++||||
T Consensus 100 ~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~i~i~~p~NP 173 (387)
T PRK07683 100 EAIDIAF--RTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLTAEALENAITE---KTRCVVLPYPSNP 173 (387)
T ss_pred HHHHHHH--HHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCCHHHHHHhcCc---CceEEEEeCCCCC
Confidence 9999884 3446799999999999999999999999999999985 34677788999988763 4567788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|++||+||+|+++.+++. ..++..+.+..+++++++||||.||+||+|+||+ +++
T Consensus 174 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i--~~~ 248 (387)
T PRK07683 174 TGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP---HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFL--FAP 248 (387)
T ss_pred CCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC---cCChhhccCCcCCeEEEeeccccccCccceeEEE--EcC
Confidence 99999999999999999999999999999999987532 2244444334568999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.+.......+++.++|.++..+|...+.|
T Consensus 249 -~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 284 (387)
T PRK07683 249 -SY----LAKHILKVHQYNVTCASSISQYAALEALTAGKDD 284 (387)
T ss_pred -HH----HHHHHHHHHHhccCCCChHHHHHHHHHHhCChHH
Confidence 66 4555554444445577889999999888765544
No 47
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=7.2e-38 Score=304.93 Aligned_cols=253 Identities=16% Similarity=0.169 Sum_probs=192.0
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHcc----CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.+++++|+.|++. . .+++.+.+++.+.... ....+|.+..|.++||+++|+++...++..+++++|++ |
T Consensus 33 ~~~~i~l~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t 105 (409)
T PRK07590 33 EAKIIRLGIGDVT-Q----PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--S 105 (409)
T ss_pred CCceEEecCcCCC-C----CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--C
Confidence 3479999999863 2 2345555555554432 13368999999999999999998888888899999988 9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCC-----------eEEEecccCCCCCCCHHHHHHHHHcC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-----------WSEYRYYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-----------~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (363)
+|+++++.++ +..+.|||+|++++|+|+.|...++..|.+ +++++++.++++.+|++.
T Consensus 106 ~Ga~~al~~l---~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-------- 174 (409)
T PRK07590 106 DGAKCDTGNI---LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-------- 174 (409)
T ss_pred CCHHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc--------
Confidence 9999998876 345679999999999999999999999987 889998543344444321
Q ss_pred CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
++++++++||||||||.+++.+++++|+++|++++++||+||+|.+|.+++. ...++..+....+++|+++||||.|
T Consensus 175 -~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~ 251 (409)
T PRK07590 175 -EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEGARECAIEFRSFSKTA 251 (409)
T ss_pred -cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCCcccceEEEecCcccc
Confidence 2456777789999999999999999999999999999999999999987532 1223333322235799999999999
Q ss_pred ccccccceEEEEeeCChhHHHHH--------HHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 307 GLYAERIGAMNVVCSSSDLAARV--------KSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~~--------~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+||+|+||+ +++ ++.++++ .+.........+.+++.+.|.+++.+|+.
T Consensus 252 ~~pGlRiG~~--i~~-~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 308 (409)
T PRK07590 252 GFTGTRCAYT--VVP-KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP 308 (409)
T ss_pred CCcCceeEEE--EcC-HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence 9999999999 776 5543311 11122222333457899999999888764
No 48
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-37 Score=300.63 Aligned_cols=257 Identities=19% Similarity=0.211 Sum_probs=209.1
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCccc-CCcEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-EQRVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-~~~i~~~~t~ggt 161 (363)
+++++|+.|.+. ..+++.+.+++.+.........|.+..|.+++|+++++++....+..++ +++|++ |.|++
T Consensus 27 ~~~~~l~~g~~~-----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~--t~G~~ 99 (389)
T PRK05957 27 PGTISLGQGVVS-----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVV--TAGSN 99 (389)
T ss_pred CCeEEccCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCChH
Confidence 478999999863 2246677777776654333367999999999999999999877777666 678988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +...+.+||.|++++|+|..+...++..|++++.++.+ +++++|++.+++.+++ +++++++++||||
T Consensus 100 ~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~klv~~~~p~NP 172 (389)
T PRK05957 100 MAFMNA--ILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITP---KTRAIVTISPNNP 172 (389)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCc---CceEEEEeCCCCC
Confidence 998877 34446799999999999999999899999999999983 4678999999998863 4667788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...+...+.+...++|+++||||.||++|+|+||+ +++
T Consensus 173 tG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~--~~~ 248 (389)
T PRK05957 173 TGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYM--VIP 248 (389)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCcEEEEecchhhccCccceeEEE--ecC
Confidence 99999999999999999999999999999999988642 12223233345578999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++++.........+++.+.|.++...|++.+.|
T Consensus 249 -~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 284 (389)
T PRK05957 249 -IH----LLEAIKKIQDTILICPPVVSQYAALGALQVGKSY 284 (389)
T ss_pred -HH----HHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHH
Confidence 56 5666766666666788999999998888765443
No 49
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=300.91 Aligned_cols=257 Identities=18% Similarity=0.189 Sum_probs=202.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
+++++|+.|.|. . +. ++.+.++..+...... .+|++..|.++||+++++++...++..++++ +|++ |.|++
T Consensus 26 ~~~i~l~~g~p~-~---~~-p~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 97 (387)
T PRK08912 26 HGAINLGQGFPD-D---PG-PEDVRRAAADALLDGS-NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMV--TSGAT 97 (387)
T ss_pred CCeEEccCCCCC-C---CC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEE--eCCcH
Confidence 478999999973 2 22 3345555444443333 6799999999999999999987777778888 8988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.+||+|+++.|+|+.+...++..|++++.++++ ++++++|++.+++.+.. ++++++++|||||
T Consensus 98 ~al~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP 171 (387)
T PRK08912 98 EALAAA--LLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE-PPHWRLPRAALAAAFSP---RTKAVLLNNPLNP 171 (387)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccCcCCHHHHHHHhCc---cceEEEEeCCCCC
Confidence 999877 44557799999999999999999999999999999984 34688999999998863 4567778899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+.+..+++++++||||.||++|+|+||+ +++
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~--~~~ 247 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV--CAA 247 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCCccCceEEEeechhhccCcCceeEEE--ecC
Confidence 99999999999999999999999999999999988642 22233333223468999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.........+.++..|.++...|...++|
T Consensus 248 -~~----~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 283 (387)
T PRK08912 248 -PP----LLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDY 283 (387)
T ss_pred -HH----HHHHHHHHHhhccccCChHHHHHHHHHHhCCHHH
Confidence 66 4555555554444567777888887776544444
No 50
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-37 Score=299.45 Aligned_cols=259 Identities=20% Similarity=0.197 Sum_probs=209.8
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+++++|+.|++. ..+++.+.+++.+...... ..|.+..|.++||+++++++.+.++..+++++|++ |.|+++
T Consensus 24 ~~~i~l~~g~~~-----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~~ 95 (382)
T PRK06108 24 EGVLPLWFGESD-----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGVQ 95 (382)
T ss_pred CCeEEecCCCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChHH
Confidence 478999999972 2235678888777664433 56999999999999999999877777788999988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccC-CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++.++. ..++.+||.|++++|+|+.+...++..|++++.+|++.+ .++.+|++.+++.++ ++++++++++||||
T Consensus 96 al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NP 170 (382)
T PRK06108 96 ALMLAA--QALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNP 170 (382)
T ss_pred HHHHHH--HHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCC
Confidence 998883 445679999999999999999999999999999998643 356799999998886 24667778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|+++|+||+|.++.++.. ....++..+.+..+++++++||||.||++|+|+||+ +++
T Consensus 171 tG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~--~~~ 247 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG-GRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL--VAP 247 (382)
T ss_pred CCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC-CCCCCHhhcCCCcCCEEEEeechhhccCcccceeee--eCC
Confidence 99999999999999999999999999999999987511 122333444344578999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.........+++.+.|.++..+|+..++|
T Consensus 248 -~~----~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 283 (382)
T PRK06108 248 -PA----LGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDF 283 (382)
T ss_pred -HH----HHHHHHHHHHhcccCCChHHHHHHHHHHhCChHH
Confidence 66 4555555544456788999999998888765544
No 51
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=8.5e-38 Score=302.22 Aligned_cols=256 Identities=14% Similarity=0.164 Sum_probs=207.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~ 162 (363)
++|+|+.|.+. .. .++.+.+++.+...... .+|.+..|.++||+++++++.+.++..++++ +|++ |.|+++
T Consensus 31 ~~i~l~~g~~~-~~----~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~~~ 102 (386)
T PRK09082 31 GAINLSQGFPD-FD----GPPYLVEALAYAMAAGH-NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGATE 102 (386)
T ss_pred CEEEecCCCCC-CC----CCHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCHHH
Confidence 78999999863 21 24556666666554333 6799999999999999999877667666665 7888 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++ +..++.+||+|+++.|+|..+...++..|++++.+++++ +++++|++.+++.++. +++++++++|||||
T Consensus 103 al~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~---~~~~v~l~~p~NPt 176 (386)
T PRK09082 103 ALFAA--ILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISP---RTRLIILNTPHNPS 176 (386)
T ss_pred HHHHH--HHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCc---cceEEEEeCCCCCC
Confidence 99888 445578999999999999999999999999999999853 4689999999998863 46677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++|+++++++|+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+ +++
T Consensus 177 G~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~i--v~~- 251 (386)
T PRK09082 177 GTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYC--VAP- 251 (386)
T ss_pred CcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcCccCcEEEEeechhhccchhhhhhhh--hCC-
Confidence 9999999999999999999999999999999988642 22344333333579999999999999999999999 766
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+++.......+++.+.|.+++.+|...++|
T Consensus 252 ~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 287 (386)
T PRK09082 252 AA----LSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEH 287 (386)
T ss_pred HH----HHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHH
Confidence 66 5666666665556689999999999988644443
No 52
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=2.9e-37 Score=298.65 Aligned_cols=275 Identities=15% Similarity=0.162 Sum_probs=213.1
Q ss_pred CCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcC
Q 017967 63 TMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA 142 (363)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~ 142 (363)
...+...+..+...... +++++|+.|.|. ... ++.+.++..+.+.... .+|.+..|.++||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~---~~~i~l~~g~p~-~~~----~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 7 RPFGTTIFAEMSALAVR---TGAVNLGQGFPD-EDG----PPEMLEAAQEAIAGGV-NQYPPGPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhcCccHHHHHHHHHhh---CCeEEccCCCCC-CCC----CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHH
Confidence 33344455555555543 378999999973 222 2345555555443333 67988999999999999998777
Q ss_pred CCCcccCC-cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccC-CCCCCCHHHHH
Q 017967 143 DNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMI 220 (363)
Q Consensus 143 ~~~~~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~ 220 (363)
++..++++ +|++ |.|+++++.++ +..++.+||+|+++.|+|..+..+++..|.+++.+++++. .++.+|++.++
T Consensus 78 ~g~~~~~~~~i~~--t~G~~~al~~~--~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 153 (387)
T PRK07777 78 YGLEYDPDTEVLV--TVGATEAIAAA--VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALR 153 (387)
T ss_pred hCCCCCCCCcEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHH
Confidence 77777775 7988 99999999887 4555679999999999999999999999999999998654 35779999999
Q ss_pred HHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 221 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 221 ~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
+.+.+ ++++++++|||||||.+++.+++++|+++|+++++++|+||+|.++.+++. ...++..+.+..+++++++
T Consensus 154 ~~~~~---~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~ 228 (387)
T PRK07777 154 AAVTP---RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTIS 228 (387)
T ss_pred HhcCc---ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEEe
Confidence 98763 456777899999999999999999999999999999999999999988542 1223333322346899999
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
||||.||++|+|+||+ +++ ++ +++.+.........+++.+.|.+++.++...++|
T Consensus 229 S~SK~~g~~GlRiG~~--~~~-~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 283 (387)
T PRK07777 229 SAAKTFNVTGWKIGWA--CGP-AP----LIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAW 283 (387)
T ss_pred echhhccCcCceeEEE--ecC-HH----HHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHH
Confidence 9999999999999999 665 55 5566655554445567888899988888766666
No 53
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-37 Score=299.58 Aligned_cols=256 Identities=18% Similarity=0.224 Sum_probs=209.2
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
++.|+|+.|++. ..+++.+.++..+...... ..|.+..|.++||+++|+++...++..+++++|++ |.|+++
T Consensus 33 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~ 104 (391)
T PRK08361 33 ENVISLGIGEPD-----FDTPKNIKEAAKRALDEGW-THYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIV--TAGAYE 104 (391)
T ss_pred cCeEEcCCCCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--eCChHH
Confidence 378999999862 1135677777777664433 57988999999999999998776677788999988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++ +..++.+||.|++++|+|..+...++..|++++.++++++.++++|++.+++.++. +++++++++|||||
T Consensus 105 al~~~--~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~v~i~~p~NPt 179 (391)
T PRK08361 105 ATYLA--FESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK---RTRMIVINYPNNPT 179 (391)
T ss_pred HHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc---ccEEEEEeCCCCCC
Confidence 99888 44456799999999999999999999999999999996555678999999998873 45677889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++|++++++||+||+|.++.+++. ...+...+ ..+++++++||||.||++|+|+||+ +++
T Consensus 180 G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~--~~~- 252 (391)
T PRK08361 180 GATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFV--IAP- 252 (391)
T ss_pred CcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhh--ccC-
Confidence 9999999999999999999999999999999987532 12233222 2368999999999999999999999 765
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.........+++.+.|.++..+|++.+.|
T Consensus 253 ~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 288 (391)
T PRK08361 253 EQ----VIKDMIKLHAYIIGNVASFVQIAGIEALRSKESW 288 (391)
T ss_pred HH----HHHHHHHHHhhhccCCChHHHHHHHHHhcCCccc
Confidence 66 4555555555455688999999999998876654
No 54
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.1e-37 Score=299.95 Aligned_cols=246 Identities=17% Similarity=0.136 Sum_probs=199.8
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++++|++|++. ..++. .+ ++..+...... .+|++..|.++||+++|+++.+ +++++|++ |+|+++
T Consensus 26 ~~~~~~~~~e~~-~~~~~----~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G~~~ 91 (373)
T PRK07324 26 SCIDSLTLEELL-ALAGK----NP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNGATG 91 (373)
T ss_pred CCCCCCcHHHHH-hccCc----ch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCChHH
Confidence 489999999983 33222 33 34333343333 6899999999999999999753 45789988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++ +..++.+||+|+++.|+|..+...++..|++++.+|++++.++.+|++.+++.++ ++++++++++|||||
T Consensus 92 al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~kli~i~~p~NPt 166 (373)
T PRK07324 92 ANFLV--LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR---PNTKLICINNANNPT 166 (373)
T ss_pred HHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC---CCCcEEEEeCCCCCC
Confidence 99888 4455789999999999999999999999999999999755567789999988776 346688889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++|+++|++||+||+|.++.++. ...++ .+..+++|+++||||.||++|+|+||+ +++
T Consensus 167 G~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s~---~~~~~~~I~~~s~SK~~~~~G~RiG~i--~~~- 237 (373)
T PRK07324 167 GALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPSI---ADLYEKGISTNSMSKTYSLPGIRVGWI--AAN- 237 (373)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCCh---hhccCCEEEEecchhhcCCccceeEEE--ecC-
Confidence 999999999999999999999999999999998753 12233 233468999999999999999999999 764
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
++ +++++++.......+++.++|.++..+|+..+
T Consensus 238 ~~----li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~ 271 (373)
T PRK07324 238 EE----VIDILRKYRDYTMICAGVFDDMLASLALEHRD 271 (373)
T ss_pred HH----HHHHHHHHhCcEEecCChHHHHHHHHHHcCHH
Confidence 76 66777777666667888999999888776543
No 55
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1e-36 Score=294.82 Aligned_cols=263 Identities=22% Similarity=0.287 Sum_probs=202.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCccc---CCcEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK---EQRVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~---~~~i~~~~t~gg 160 (363)
+++|+++|.+.+ .+.+.+.+.+.++..... ....++|++..|.++||+++++++.+..+ ... .++|++ |+|+
T Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~i--t~G~ 78 (388)
T PRK08637 4 TKYNATIGMATE-KGGPMYLSSLQDLLNDLT-PDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIV--TNAL 78 (388)
T ss_pred cceecceeeEec-CCCcchHHHHHHHHHhhc-cccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeE--ccch
Confidence 689999999854 445677788888776643 23448899999999999999999876543 222 257877 9999
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEEecccCCCCCCCHHHHHHHHHc-CCCCcEEEEEcCC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGCA 238 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~~~i~~p 238 (363)
++++.++. ..++.|||.|++++|+|+.|...+. ..|++++.+|+.+ +++++|++.+++.++. .++.++++++|||
T Consensus 79 ~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P 155 (388)
T PRK08637 79 THGLSLVA--DLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFP 155 (388)
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCC
Confidence 99998884 3446799999999999999998865 6899999999842 3468999999998872 1235678889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh-----cCCeEEEecCCCCCcCCCCCCchhHH-HHHHhcCCeE--EEEEcCcccccccc
Q 017967 239 HNPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASSV-RLFATRGMEL--LVAQSYSKNLGLYA 310 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~-----~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~~~v--i~~~S~SK~~~l~G 310 (363)
|||||.+++.+++++|+++|++ ++++||+||+|.+|.+++. ...++ ..+.+..+++ ++++||||.|++||
T Consensus 156 ~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG 233 (388)
T PRK08637 156 NNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFVWG 233 (388)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCCcc
Confidence 9999999999999999999875 8999999999999988642 22232 2333444575 45569999999999
Q ss_pred ccceEEEEeeC-----ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 311 ERIGAMNVVCS-----SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 311 ~RvG~i~~v~~-----~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+|+||+ +++ +++.++++.+.+....+....++|.+.|.++..+|++
T Consensus 234 lRlG~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 284 (388)
T PRK08637 234 FRVGFI--TFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNS 284 (388)
T ss_pred cceEEE--EEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCC
Confidence 999999 654 3665555544333233334568999999999999875
No 56
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=5.5e-37 Score=297.42 Aligned_cols=259 Identities=15% Similarity=0.151 Sum_probs=201.7
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
+++++|+.|.|. .. .++.+.+++.+........+|.+..|.++||+++++++...++..++++ +|++ |.|++
T Consensus 29 ~~~i~l~~g~p~-~~----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~G~~ 101 (395)
T PRK08175 29 EDIIDFSMGNPD-GP----TPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TIGSK 101 (395)
T ss_pred CCeEEcCCCCCC-CC----CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccCcH
Confidence 579999999863 21 2344444444433333347899999999999999999987778888876 7988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++. ..++.|||+|++++|+|+.+...++..|++++.++++++ +.+++.+++.++....+++++++++||||
T Consensus 102 ~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---~~~~~~l~~~l~~~~~~~~~v~i~~p~NP 176 (395)
T PRK08175 102 EGLAHLM--LATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG---VDFFNELERAIRESYPKPKMMILGFPSNP 176 (395)
T ss_pred HHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC---CCcHHHHHHHHhhccCCceEEEEeCCCCC
Confidence 9998873 445789999999999999999999999999999998532 33578888888753335677888899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....+++++++||||.||+||+|+||+ ++
T Consensus 177 tG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~--~~- 251 (395)
T PRK08175 177 TAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFM--VG- 251 (395)
T ss_pred CCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCCcccCEEEEeeccccccCcchhheee--eC-
Confidence 99999999999999999999999999999999987532 12233332222467899999999999999999999 65
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++ +++++.+.......+++.+.|.++..+|+..++|
T Consensus 252 ~~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 288 (395)
T PRK08175 252 NPE----LVSALARIKSYHDYGTFTPLQVAAIAALEGDQQC 288 (395)
T ss_pred CHH----HHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHH
Confidence 477 5666666655455677888999888887654443
No 57
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.5e-36 Score=295.01 Aligned_cols=275 Identities=17% Similarity=0.170 Sum_probs=214.7
Q ss_pred hhhHHHHHhcCC--CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcc
Q 017967 70 ILGVSEAFKADT--DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVL 147 (363)
Q Consensus 70 ~~~~~~~~~~~~--~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~ 147 (363)
|.++...++... ..++++|+.|.|. ......+++.+.+++.+.+.......|.+..|.+++|+++++++....+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~-~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 94 (403)
T TIGR01265 16 IRAIVDNLKVKPNPEKPIIPLSHGDPS-VFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL 94 (403)
T ss_pred HHHHHHHHHHHHhcCCCeEEeCCCCCC-ccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 445555554432 2489999999973 1112334677888877766543335798999999999999999987667778
Q ss_pred cCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 148 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 148 ~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
++++|++ |+|+++++.++.. .++.+||+|++++|+|..+...++..|++++.+++..++++++|++.+++.+..
T Consensus 95 ~~~~ii~--t~G~t~al~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 168 (403)
T TIGR01265 95 TADDVVL--TSGCSQAIEICIE--ALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE-- 168 (403)
T ss_pred CHHHEEE--ecChHHHHHHHHH--HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc--
Confidence 8899988 9999999998843 345799999999999999999999999999999885455688999999998863
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++. ...++..+ ....++|+++||||.|+
T Consensus 169 -~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 169 -KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA--PFIPMASF-ASIVPVLSLGGISKRWV 244 (403)
T ss_pred -CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--Cccchhhh-ccCCcEEEEeecccccC
Confidence 456777899999999999999999999999999999999999999988642 23344444 33457999999999999
Q ss_pred cccccceEEEEeeCCh-hH-HHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 308 LYAERIGAMNVVCSSS-DL-AARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~-~~-~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+||+|+||+ +++++ .. ...+++.+..... ...+++.+.|.++..+|.+
T Consensus 245 ~pGlRiG~~--v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 294 (403)
T TIGR01265 245 VPGWRLGWI--IIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILEN 294 (403)
T ss_pred CCcceEEEE--EEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHh
Confidence 999999999 76543 22 2225555554433 3457899999999888754
No 58
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.7e-36 Score=294.88 Aligned_cols=261 Identities=17% Similarity=0.108 Sum_probs=202.8
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++.++|+.|.+... .. .+++.+.+++.+.... ..+|++..|.++||+++|+++.......+++++|++ |+|++
T Consensus 32 ~~~~i~l~~g~p~~~-~~-~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~~ 105 (404)
T PRK09265 32 GHKILKLNIGNPAPF-GF-EAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYI--GNGVS 105 (404)
T ss_pred CCCeEEecCCCCCcC-CC-CCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEE--eCChH
Confidence 348899999986311 11 1344555555443322 367999999999999999998765544678999988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++. ..++.+||+|++++|+|..+...++..|.+++.++++.++++.+|++.+++.+. +++++++++|||||
T Consensus 106 ~~l~~~~--~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NP 180 (404)
T PRK09265 106 ELIVMAM--QALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT---PRTKAIVIINPNNP 180 (404)
T ss_pred HHHHHHH--HHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc---ccceEEEEECCCCC
Confidence 9998883 344679999999999999999999999999999987544567899999999886 34667788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++++++||||.||+||+|+||+ +++
T Consensus 181 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pGlRiG~~--v~~ 255 (404)
T PRK09265 181 TGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASL-APDLLCVTFNGLSKAYRVAGFRVGWM--VLS 255 (404)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHc-CCCceEEEEecchhhccCcccceEEE--EEe
Confidence 99999999999999999999999999999999987642 22334333 23347999999999999999999999 653
Q ss_pred -ChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 322 -SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 322 -~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+++..+.+++.+... .....+++.++|.++..+|.+.
T Consensus 256 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~ 293 (404)
T PRK09265 256 GPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGY 293 (404)
T ss_pred CchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCc
Confidence 344444455555443 2344588999999999888654
No 59
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.4e-36 Score=289.94 Aligned_cols=247 Identities=16% Similarity=0.121 Sum_probs=200.7
Q ss_pred cEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchhHH
Q 017967 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGS 163 (363)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~a 163 (363)
+++|+.|.|. ..+++.+.+++.+... ...+|.+..|.++||+++++++.+.+++.++++ +|++ |+|++++
T Consensus 2 ~~~~~~g~p~-----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~a 72 (350)
T TIGR03537 2 LFDFGTGDPK-----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKEA 72 (350)
T ss_pred eEeccCCCCC-----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHHH
Confidence 6789988862 2235677777776643 236798899999999999999988778888887 9988 9999999
Q ss_pred HHHHHHHHHHhCCC---CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 164 LRLAAALIERYFPG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 164 l~l~~~l~~~~~~g---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+.++ +..++.+| |.|+++.|+|+.|...++..|++++.+++++++++.+|++.+++++++ +++++++++|||
T Consensus 73 i~~~--~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~N 147 (350)
T TIGR03537 73 IFHF--PLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE---ETKIVWINYPHN 147 (350)
T ss_pred HHHH--HHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh---ccEEEEEeCCCC
Confidence 9888 34456676 699999999999999999999999999986455677899999998873 466788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+++++|+++|+++|++||+||+|.++.++.. ..+...+ ..+++++++||||.+|++|+|+||+ ++
T Consensus 148 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~--~~ 220 (350)
T TIGR03537 148 PTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP---PHSALEV--GIENVLAFHSLSKRSGMTGYRSGFV--AG 220 (350)
T ss_pred CcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC---CCchhhc--CcCCEEEEeecccccCCccccceee--ec
Confidence 999999999999999999999999999999999876532 2223222 2468999999999999999999999 65
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ ++ +++++.........+++.+.|.++...+.
T Consensus 221 ~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 252 (350)
T TIGR03537 221 D-EK----LISFLRKLRANFGVASPDFVQAAAKAAWS 252 (350)
T ss_pred C-HH----HHHHHHHHHHhhccCCCHHHHHHHHHHhC
Confidence 4 66 55666655555556777788888866665
No 60
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.9e-36 Score=293.94 Aligned_cols=263 Identities=18% Similarity=0.177 Sum_probs=209.1
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+|+.|.|...+ ..+++.+.+++.+.+.... ..|++..|.++||+++++++...++..+++++|++ |+|+++
T Consensus 30 ~~~i~l~~g~p~~~~--~~p~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~~~ 104 (398)
T PRK08363 30 IKVIRLNIGDPVKFD--FQPPEHMKEAYCRAIKEGH-NYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAAVTE 104 (398)
T ss_pred CCeEEEeCCCCCcCC--CCCCHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHHH
Confidence 479999999973211 1246777888777664332 56988999999999999999887788889999988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++ +..++.+||.|++++|+|..+...++..|.+++.++..+++++.+|++.+++.+.+ ++++++++||||||
T Consensus 105 al~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NPt 179 (398)
T PRK08363 105 ALQLI--FGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE---KTKAIAVINPNNPT 179 (398)
T ss_pred HHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc---ceEEEEEECCCCCC
Confidence 99988 44457899999999999999999999999998888432345677899999988763 45677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee-C
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC-S 321 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~-~ 321 (363)
|.+++.+++++|+++|+++|+++|+||+|.++.+++ ...++..+ ....++++++||||.|+++|+|+||+ ++ .
T Consensus 180 G~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~--~~~~ 253 (398)
T PRK08363 180 GALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSL-TKDVPVIVMNGLSKVYFATGWRLGYI--YFVD 253 (398)
T ss_pred CcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHc-CcCCcEEEEecchhccCCccceEEEE--EEeC
Confidence 999999999999999999999999999999998753 12233333 33458999999999999999999999 65 2
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++.++.+.+.+...... ..+++.++|.+++.+|...++|
T Consensus 254 ~~~~~~~l~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~ 293 (398)
T PRK08363 254 PEGKLAEVREAIDKLARI-RLCPNTPAQFAAIAGLTGPMDY 293 (398)
T ss_pred cHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHhCChHH
Confidence 366566666665544322 2478999999999888655544
No 61
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-36 Score=294.92 Aligned_cols=256 Identities=18% Similarity=0.204 Sum_probs=202.8
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++++|+.|.+. ..+++.+.+++.+... ...+|++..|.+++|+++++++. .++..+++++|++ |.|+++
T Consensus 30 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~--t~G~~~ 99 (397)
T PRK07568 30 IKVYHLNIGQPD-----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILI--TNGGSE 99 (397)
T ss_pred CCEEEecCCCCC-----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEE--cCChHH
Confidence 368999999862 1235677777665542 23679999999999999999987 4677788899988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCC-CHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL-DFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~-d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++.++. ..++.+||+|++++|+|..+...++..|++++.+++++++++.+ +++.+++.+++ +++++++++||||
T Consensus 100 al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~---~~~~v~i~~p~NP 174 (397)
T PRK07568 100 AILFAM--MAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP---KTKAILISNPGNP 174 (397)
T ss_pred HHHHHH--HHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc---cceEEEEECCCCC
Confidence 999884 34467999999999999999999999999999999853334443 57889888763 4667788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++++++|+||+|.+|.+++. ...+...+....+++++++||||.||++|+|+||+ +++
T Consensus 175 tG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~--~~~ 250 (397)
T PRK07568 175 TGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCL--ISK 250 (397)
T ss_pred CCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCCCcCCEEEEecchhhccCCCcceEEE--ecC
Confidence 99999999999999999999999999999999987642 23344444333578999999999999999999999 777
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++ +++.+.+.... ..+++.+.|.+++.+|+..++|
T Consensus 251 ~~~----~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~ 286 (397)
T PRK07568 251 NKE----LIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESY 286 (397)
T ss_pred CHH----HHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHH
Confidence 677 44444433332 3478999999999988755443
No 62
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-36 Score=293.84 Aligned_cols=281 Identities=21% Similarity=0.259 Sum_probs=221.9
Q ss_pred cCCCCCCCCCchhhHHHHHhc--CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 136 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia 136 (363)
++++...+++++.++....+. ...++.++|+.|.|. ..+++.+.++..+.+.... .+|++..|..+||++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia 78 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPD-----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPELREAIA 78 (393)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCC-----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHHHHHHHH
Confidence 345666667776555544432 112478999999873 1235677777776664433 56999999999999999
Q ss_pred HHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 137 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 137 ~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
+++...++..+++++|++ |.|+++++.++ +...+.+||.|++++|+|..+..+++..|++++.++++++.++.+|+
T Consensus 79 ~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 154 (393)
T PRK05764 79 AKLKRDNGLDYDPSQVIV--TTGAKQALYNA--FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTV 154 (393)
T ss_pred HHHHHHhCCCCCHHHEEE--eCCcHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCH
Confidence 999777777778899988 99999998887 44457799999999999999999999999999999986555678999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH-HhcCCe
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGME 295 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~~ 295 (363)
+.+++.+.+ +.+++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++. ...+...+ .+..++
T Consensus 155 ~~l~~~l~~---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~ 229 (393)
T PRK05764 155 EQLEAAITP---KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPELRDR 229 (393)
T ss_pred HHHHHhhCc---cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCCcCC
Confidence 999998863 466778899999999999999999999999999999999999999987532 22334333 234568
Q ss_pred EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 296 vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
+++++||||.+|++|+|+||+ +++ ++ +++++.........+++.+.|.++..+|+..++
T Consensus 230 ~i~~~s~SK~~~~~G~RiG~i--~~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 288 (393)
T PRK05764 230 TITVNGFSKAYAMTGWRLGYA--AGP-KE----LIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQD 288 (393)
T ss_pred EEEEecCcccccCccceeEEE--ecC-HH----HHHHHHHHHhhcccCCChHHHHHHHHHHcCChH
Confidence 999999999999999999999 654 66 566666665566778999999999988864333
No 63
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=280.50 Aligned_cols=229 Identities=18% Similarity=0.194 Sum_probs=200.5
Q ss_pred CCCCCCCcchHHHHHHHHHHHhcCC--CCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-
Q 017967 119 NKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN- 195 (363)
Q Consensus 119 ~~~Y~~~~G~~~lr~aia~~l~~~~--~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~- 195 (363)
...|.+..|++.+|+++|+++.... ...++|+++++ ++|+|++.+.+ ++++.+|||..|||.|.|+++...++
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l--~fcLadpgdafLvPtPyY~gfdrdl~~ 189 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETL--MFCLADPGDAFLVPTPYYPGFDRDLRW 189 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHH--HHHhcCCCceeeecCCCCCccccccee
Confidence 3568889999999999999996543 34788999988 99999999999 56678899999999999999988887
Q ss_pred hCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC
Q 017967 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (363)
Q Consensus 196 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~ 272 (363)
+.|+++++|.+..++++.++.+.+|+++.++ ..+.+-+++.||+||-|++++++++..+++++.++|+++|+||+|.
T Consensus 190 rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 190 RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred ccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc
Confidence 7899999999998899999999999998763 2467788889999999999999999999999999999999999999
Q ss_pred CCcCCCCCCchhHHHHHHh----cCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHH
Q 017967 273 GFASGSLDNDASSVRLFAT----RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPML 348 (363)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~----~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~ 348 (363)
+..|+.. .+.++.+... ..++|++++|+||.||+||+|+|.| .+-|+. +.++.+++ ..+..+|+..
T Consensus 270 ~sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGvi--YS~ne~----VvsaA~km--ssf~~vSs~t 339 (471)
T KOG0256|consen 270 GSVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVI--YSNNED----VVSAATKM--SSFGLVSSQT 339 (471)
T ss_pred ccccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEE--EecChH----HHHHHHHH--hhccCCcHHH
Confidence 9999863 5666666643 4579999999999999999999999 888887 77777776 4578999999
Q ss_pred HHHHhccccccccC
Q 017967 349 LGIQLSSMNGKQRW 362 (363)
Q Consensus 349 q~~~~~~l~~~~~w 362 (363)
|+.++++|.+ ++|
T Consensus 340 Q~~la~LLSD-~~f 352 (471)
T KOG0256|consen 340 QYLLASLLSD-EEF 352 (471)
T ss_pred HHHHHHHhch-HHH
Confidence 9999999988 444
No 64
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-36 Score=290.10 Aligned_cols=251 Identities=17% Similarity=0.239 Sum_probs=196.2
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHHHHhcCC--CCcccCCcEEEEeccc
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGLS 159 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~--~~~~~~~~i~~~~t~g 159 (363)
+..++|+.|++. ..+++.+.+++.+...... ...| +..|.++||+++|+|+.+.+ +..+++++|++ |+|
T Consensus 28 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G 99 (374)
T PRK02610 28 IQLDRLDTNEFP-----YDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG 99 (374)
T ss_pred cceeEecCCCCC-----CCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence 358999999862 2245677777665543321 2467 55799999999999987665 46688999988 999
Q ss_pred hhHHHHHHHHHHHHhCCCC-EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC-CCCcEEEEEcC
Q 017967 160 GTGSLRLAAALIERYFPGA-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGC 237 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~~~i~~ 237 (363)
+++++.++ +...+.+|| .|++++|+|..|...++..|++++.++++ ++++++|++.+++.++.. .+++++++++|
T Consensus 100 a~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~ 176 (374)
T PRK02610 100 SDELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176 (374)
T ss_pred hHHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence 99998866 344566786 89999999999999999999999999974 345899999999988631 13567788889
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
||||||.+++.+++++|++++ ++++||+||+|.+|.+.. ....+ ...+++|+++||||.||++|+|+||+
T Consensus 177 P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~------~~~~~-~~~~~~ivi~SfSK~~g~~GlRiG~~- 246 (374)
T PRK02610 177 PNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT------LVGEL-AQHPNWVILRTFSKAFRLAAHRVGYA- 246 (374)
T ss_pred CCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc------hHHHH-hcCCCEEEEEecchhccCcccceeee-
Confidence 999999999999999999876 499999999999986421 12222 34468999999999999999999999
Q ss_pred EeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 318 VVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++ ++ +++.+.+... ..+++.++|.++..+|++.+.|
T Consensus 247 -v~~-~~----l~~~l~~~~~--~~~~~~~~q~a~~~~l~~~~~~ 283 (374)
T PRK02610 247 -IGH-PE----LIAVLEKVRL--PYNLPSFSQLAAQLALEHRQEL 283 (374)
T ss_pred -ecC-HH----HHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHH
Confidence 765 66 5666665542 3467899999999888765544
No 65
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-36 Score=272.42 Aligned_cols=261 Identities=17% Similarity=0.173 Sum_probs=218.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+|.|+.|.|.. .+.....+...+|+.+.++.+-..+|+|..|....|+++|+|+.+...-.+++++|++ |.|.++|
T Consensus 62 ~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~l--tsGC~qA 138 (447)
T KOG0259|consen 62 PILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVL--TSGCSQA 138 (447)
T ss_pred eeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEE--eccchHH
Confidence 689999999843 3334455677788877776666689999999999999999998888777888999988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
++++ +..+.+||..||+|.|+|+-|...+...|++++.|++..+.+|.+|++.+|..+. ++++.+++.|||||+|
T Consensus 139 Ie~~--i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D---ENT~AivviNP~NPcG 213 (447)
T KOG0259|consen 139 IELA--ISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD---ENTVAIVVINPNNPCG 213 (447)
T ss_pred HHHH--HHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc---cCeeEEEEeCCCCCCc
Confidence 9999 4445689999999999999999999999999999999888999999999999887 4688999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+.+++|+++|++++++||.||+|..+.|++ .++.++..| ..--.|+.++|+||-|=.||||+||+ +..|+
T Consensus 214 nVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~f-ssiVPVitlggisKrW~VPGWRlGWi--~~hD~ 288 (447)
T KOG0259|consen 214 NVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKF-SSIVPVITLGGISKRWIVPGWRLGWI--ALHDP 288 (447)
T ss_pred ccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhc-cccCceEeecccccccccCCceeeeE--EEecc
Confidence 99999999999999999999999999999999987 356666666 34468999999999999999999999 66554
Q ss_pred hHHH---HHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 324 DLAA---RVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 324 ~~~~---~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.-+- .+++.+.... ....+++.+-|.++-.+|+.
T Consensus 289 ~gvf~~~~~~q~~~~~~-~~~~~p~TiiQ~AlP~IL~k 325 (447)
T KOG0259|consen 289 RGVFRDTKVVQGIKNFL-DIIPGPATIIQGALPDILEK 325 (447)
T ss_pred cccccchHHHHHHHHHH-hccCCccHhHHHHhHHHHHh
Confidence 4211 1223344333 24458999999999877754
No 66
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.7e-36 Score=290.65 Aligned_cols=262 Identities=20% Similarity=0.230 Sum_probs=208.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHH-HHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++|+|+.|.+.....+ ++++.+.++..+ .........|++..|.++||+++|+++.+.++..++++ +|++ +.|+.
T Consensus 2 ~~I~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQN-PPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSS-HHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHHH
T ss_pred CEEEEECCCCCCcccc-cchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--ecccc
Confidence 5899999998654444 345555555554 33333448899999999999999999986777888888 9988 88888
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC---CcEEEEEcCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFILLHGCA 238 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~~~~i~~p 238 (363)
+++.++..++. ..+||+|++++|+|+.+...++..|++++.++++.++++++|++.|++.+++.+. +..++++++|
T Consensus 79 ~~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p 157 (363)
T PF00155_consen 79 AALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNP 157 (363)
T ss_dssp HHHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESS
T ss_pred cchhhhhhccc-ccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccc
Confidence 88777733221 4599999999999999999999999999999987677899999999999986321 3568888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~ 318 (363)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++. +..+.....+...++++++||||.||++|+|+||+
T Consensus 158 ~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i-- 233 (363)
T PF00155_consen 158 NNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYI-- 233 (363)
T ss_dssp BTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEE--
T ss_pred ccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCcccccccccccceeeeeccccccccccccccc--
Confidence 99999999999999999999999999999999999998752 33333444566667999999999999999999999
Q ss_pred eeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 319 VCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 319 v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
++ +++ ++++++........ +.+.|.++..++.+.+
T Consensus 234 ~~-~~~----~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~ 268 (363)
T PF00155_consen 234 VA-PPE----LIERLRRFQRSGLS--SSPMQAAAAAALSDPE 268 (363)
T ss_dssp EE-EHH----HHHHHHHHHHHTTS--SHHHHHHHHHHHHHHH
T ss_pred cc-hhh----hhhhhhhccccccc--cchhhHHHHHhhhccc
Confidence 76 466 66667666543333 8888988888776654
No 67
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=4.9e-36 Score=287.75 Aligned_cols=262 Identities=15% Similarity=0.098 Sum_probs=199.8
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (363)
+++++..+...+.++........ .++++|+.|.|. ...++.+.+++...... .+|.+..|.++||++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~ 74 (364)
T PRK07865 4 SARLPDFPWDTLAPAKATAAAHP-DGIVDLSVGTPV-----DPVPPVIQEALAAAADA---PGYPTTAGTPELREAIVGW 74 (364)
T ss_pred cccCCCccHHHHHHHHHHHHhcC-CCEEEcCCCCCC-----CCCCHHHHHHHHHHHhh---CCCCCccCCHHHHHHHHHH
Confidence 44566666556666555554433 368999999863 12246677776554322 5798899999999999999
Q ss_pred HhcCCCCc-ccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 139 LFGADNSV-LKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 139 l~~~~~~~-~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
+.+.++.. +++++|++ |+|+++++.++.. .+ +.+||.|++++|+|+.|...++..|++++.++. +
T Consensus 75 l~~~~~~~~~~~~~I~i--t~G~~~~i~~~~~--~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~ 141 (364)
T PRK07865 75 LARRRGVTGLDPAAVLP--VIGSKELVAWLPT--LLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------L 141 (364)
T ss_pred HHHHcCCCCCCcccEEE--ccChHHHHHHHHH--HHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------h
Confidence 98887876 88999988 9999999988733 33 579999999999999999999999999888742 2
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH---HhcC
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF---ATRG 293 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---~~~~ 293 (363)
+.+++ +++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..+.... ....
T Consensus 142 ~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~~ 212 (364)
T PRK07865 142 TELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE---PVSILDPRVCGGDH 212 (364)
T ss_pred hhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC---CCccccccccCCcc
Confidence 22221 2456777789999999999999999999999999999999999999987531 1111100 0123
Q ss_pred CeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++++++||||.||++|+|+||+ +++ ++ ++++++........+++.+.|.++..+|.+
T Consensus 213 ~~~i~~~S~SK~~~~~GlRiG~i--~~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 270 (364)
T PRK07865 213 TGLLAVHSLSKQSNLAGYRAGFV--AGD-PA----LVAELLEVRKHAGMMVPAPVQAAMVAALGD 270 (364)
T ss_pred ceEEEEeechhccCCCceeeEEE--ecC-HH----HHHHHHHHHHhcCCCcCHHHHHHHHHHhCC
Confidence 68999999999999999999999 665 66 556665555555568899999999888865
No 68
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.8e-36 Score=288.33 Aligned_cols=242 Identities=14% Similarity=0.144 Sum_probs=191.7
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.+.|+|+.|++. ..+++.+.+++...... . ..| |..|.++||+++|+++. +++++|++ |+|+++
T Consensus 29 ~~~i~l~~nen~-----~~~~~~v~~a~~~~~~~-~-~~Y-p~~g~~~Lr~aia~~~~------~~~~~I~v--t~Gs~e 92 (366)
T PRK01533 29 HSFVKLASNENP-----FGCSPRVLDELQKSWLD-H-ALY-PDGGATTLRQTIANKLH------VKMEQVLC--GSGLDE 92 (366)
T ss_pred CceEEeCCCCCC-----CCCCHHHHHHHHHHHHh-c-CcC-CCCCHHHHHHHHHHHhC------CCcceEEE--CCCHHH
Confidence 478999999862 22456666666554322 1 335 77899999999999972 45899988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++. ..++.+||.|++++|+|+.|...++..|++++.++++ ++++|++.+++.+++ +++++++|||||||
T Consensus 93 ~i~~~~--~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~---~~~~v~i~~P~NPT 164 (366)
T PRK01533 93 VIQIIS--RAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDN---DTKIVWICNPNNPT 164 (366)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCc---CCcEEEEeCCCCCC
Confidence 999884 4446799999999999999999999999999999983 457999999998863 45677889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++|++++ ++|+||+|.+|.+.+. ..+.....+..+++|+++||||.||++|+|+||+ +++
T Consensus 165 G~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~---~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~--i~~- 237 (366)
T PRK01533 165 GTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD---FPETLPLLEKHKNILVLRTFSKAYGLASFRVGYA--VGH- 237 (366)
T ss_pred CCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc---CcchhHHhccCCCEEEEeCchHHhcChHHHHhHH--hCC-
Confidence 99999999999999998766 5777999999886521 1222233455679999999999999999999999 765
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.+... ..+++.++|.++..+|++ ++|
T Consensus 238 ~~----~~~~l~~~~~--~~~~~~~~q~aa~~~l~~-~~~ 270 (366)
T PRK01533 238 EE----LIEKLNVVRL--PFNVSSLAQKAATIAFGD-DEF 270 (366)
T ss_pred HH----HHHHHHHhcC--CCCcCHHHHHHHHHHhCC-HHH
Confidence 77 5666665542 358999999999999865 444
No 69
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-36 Score=296.81 Aligned_cols=245 Identities=13% Similarity=0.078 Sum_probs=187.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcC-CCCcc-c--CCcEEEEeccc
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA-DNSVL-K--EQRVATVQGLS 159 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~-~~~~~-~--~~~i~~~~t~g 159 (363)
+.|+|++|+| +.+. ++.+.++...+. . .+|+++.|.+++|+++++++..+ .+... . +++|++ |.|
T Consensus 101 ~~i~l~~g~p-~~~~----~~~v~e~~~~~~-~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~G 169 (527)
T PRK09275 101 DAVSYVRDQL-GFDA----DEFVYELVDGII-G---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VEG 169 (527)
T ss_pred HHHhhcCCCC-CCCC----CHHHHHHHHHHh-c---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 5799999997 3322 445555443332 2 35999999999999999966543 22221 2 348988 999
Q ss_pred hhHHHHHHHHHH---HHhCCCCEEEEcCCCCcchHHHHhhCC--CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEE
Q 017967 160 GTGSLRLAAALI---ERYFPGAKVLISSPTWGNHKNIFNDAR--VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 234 (363)
Q Consensus 160 gt~al~l~~~l~---~~~~~gd~Vlv~~P~y~~~~~~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 234 (363)
+++++.++...+ .++.|||+|++++|+|+.|...++..| ++++.++.+++++|.+|++.++++++ +++++++
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~---~~tkai~ 246 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD---PSIKALF 246 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC---CCCCEEE
Confidence 999998884432 246799999999999999999988765 45566665445578999999998775 3567888
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHh--cCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc
Q 017967 235 HGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (363)
Q Consensus 235 i~~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R 312 (363)
++|||||||.+++.+++++|+++|++ ++++||+||+|.+|.+. ..+.... ..+++|+++||||.||++|||
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~~--~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFAV--LPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHHh--CCCCEEEEeehhhhccCcHhH
Confidence 89999999999999999999999965 49999999999998752 2233222 347999999999999999999
Q ss_pred ceEEEEeeCChhHHHHHHHH--------------------------------HHhhhccccCCCchHHHHH
Q 017967 313 IGAMNVVCSSSDLAARVKSQ--------------------------------LKRLARPMYSNPPPMLLGI 351 (363)
Q Consensus 313 vG~i~~v~~~~~~~~~~~~~--------------------------------l~~~~~~~~~~~s~~~q~~ 351 (363)
+||+ +++.++.++++++. .+++...+..++|.+.|.+
T Consensus 320 lG~i--~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a 388 (527)
T PRK09275 320 LGVI--ALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQ 388 (527)
T ss_pred Hhhh--hcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHH
Confidence 9999 78765444444433 3677778888999999997
No 70
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.6e-35 Score=287.86 Aligned_cols=252 Identities=17% Similarity=0.160 Sum_probs=187.3
Q ss_pred CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHcc----CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
+.+++++|+.|++. ..+++.+.+++...+.. ....+|.|..|.++||+++|+++.+. .+++++|++
T Consensus 31 ~~~~~i~l~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~i-- 100 (402)
T TIGR03542 31 PSADIIRLGIGDTT-----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFI-- 100 (402)
T ss_pred CCCCeEEcCCCCCC-----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEE--
Confidence 34589999999862 22355666666555432 12256989999999999999986443 267899988
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCC-----------CeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-----------PWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~-----------~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
|+|+++++.++ ..++.+||.|++++|+|..|...++..|+ +++.++++++.++.+|++. .
T Consensus 101 t~Ga~~al~~l---~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~ 171 (402)
T TIGR03542 101 SDGAKCDVFRL---QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E 171 (402)
T ss_pred CCCcHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------c
Confidence 99999998876 34467999999999999999999999999 9999988544445444321 1
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
+++++++++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++. ...++..+....+++++++||||.
T Consensus 172 --~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~ 247 (402)
T TIGR03542 172 --PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKECAIEFRSFSKT 247 (402)
T ss_pred --CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCcccEEEEecCccc
Confidence 2456777789999999999999999999999999999999999999987531 112332222223679999999999
Q ss_pred cccccccceEEEEeeCChhHH----HHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 306 LGLYAERIGAMNVVCSSSDLA----ARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~~~~----~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
||+||+|+||+ +++ ++.+ +.+.+.........+.+++.++|.++..++.+
T Consensus 248 ~g~pGlRiG~~--i~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 301 (402)
T TIGR03542 248 AGFTGVRLGWT--VVP-KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAG 301 (402)
T ss_pred cCCCCcceEEE--Eec-HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcC
Confidence 99999999999 776 4432 11223332222234557889999998887764
No 71
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.5e-35 Score=278.43 Aligned_cols=253 Identities=17% Similarity=0.153 Sum_probs=194.4
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (363)
+.++.+...... ++.++|+.|++. .+ +++.+.+++.+.... ..+|+ ..+.++||+++|+++. +++
T Consensus 7 ~~~~~~~~~~~~-~~~~~l~~~~~~--~~---~p~~~~~a~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------~~~ 71 (354)
T PRK06358 7 INEIAREKGLTK-NMILDFSANINP--LG---VPESLKQAITENLDK--LVEYP-DPDYLELRKRIASFEQ------LDL 71 (354)
T ss_pred HHHHHHHhCCCc-cceEEecCCCCC--CC---CCHHHHHHHHHHHHh--hhcCC-CccHHHHHHHHHHHhC------CCh
Confidence 444444443322 357999998853 11 246677776665432 25684 4578999999999972 468
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
++|++ |+|+++++.++.. .+.+ +.|++++|+|+.|...++..|++++.+++++++++.+| +.+.+.+.. +
T Consensus 72 ~~i~i--t~Ga~~~l~~~~~---~~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~---~ 141 (354)
T PRK06358 72 ENVIL--GNGATELIFNIVK---VTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE---E 141 (354)
T ss_pred hhEEE--CCCHHHHHHHHHH---HhCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc---C
Confidence 99988 9999999988843 2444 68999999999999999999999999998655567888 666665542 3
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
+++++++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++. ..+.....+..+++|+++||||.||++
T Consensus 142 ~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~---~~~~~~~~~~~~~vi~~~S~SK~~gl~ 218 (354)
T PRK06358 142 IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENE---TISMINYLENFKNLIIIRAFTKFFAIP 218 (354)
T ss_pred CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCcc---chhHHHhccCCCCEEEEEechhhccCc
Confidence 56777799999999999999999999999999999999999999997642 223333345568999999999999999
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+|+||+ ++++++ +++.+..... ..+++.++|.++..+|++
T Consensus 219 G~RiG~l--v~~~~~----~~~~~~~~~~--~~~~~~~~q~~~~~~l~~ 259 (354)
T PRK06358 219 GLRLGYG--LTSNKN----LAEKLLQMRE--PWSINTFADLAGQTLLDD 259 (354)
T ss_pred chhheee--ecCCHH----HHHHHHHhCC--CCcchHHHHHHHHHHhcc
Confidence 9999999 777677 5555655543 357899999999888864
No 72
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.5e-35 Score=290.52 Aligned_cols=243 Identities=16% Similarity=0.159 Sum_probs=189.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
..++|+.|.|. ...++.+.+++.+.... ...|++..|.++||+++++++....+ .+++|++ |+|++++
T Consensus 86 ~~i~L~~g~p~-----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~~a 153 (431)
T PRK15481 86 PLHDLAGGNPD-----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAIDA 153 (431)
T ss_pred hhhhhhcCCCC-----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcHHH
Confidence 57899998762 11234466665554322 25799999999999999999765322 2468988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
+.++ +..++.|||.|++++|+|+.|...++..|++++.+|+++ .++|++.++++++. +.+.++++||||||||
T Consensus 154 l~~~--~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~---~g~~~~~l~~~~~~--~~k~i~~~p~p~NPTG 226 (431)
T PRK15481 154 IERL--LCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA---EGMQPEKLERALAQ--GARAVILTPRAHNPTG 226 (431)
T ss_pred HHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC---CCCCHHHHHHHHhc--CCCEEEECCCCCCCCC
Confidence 9988 445578999999999999999999999999999999843 36899999998874 3344555459999999
Q ss_pred CCCCHHHHHHHHHHHHhc-CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 244 IDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
.+++.+++++|+++|+++ +++||+||+|.+|.+++. .+. +....+++++++||||.|+ ||+|+||+ +++
T Consensus 227 ~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~----~~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~--i~~- 296 (431)
T PRK15481 227 CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY----HSV--IPQTTQRWALIRSVSKALG-PDLRLAFV--ASD- 296 (431)
T ss_pred ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC----CCC--CcCCCCCEEEEeeeccccC-CCceeEEE--eCC-
Confidence 999999999999999999 999999999999986421 111 1113468999999999999 99999999 765
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++ +++.+.........++|.++|.+++.+|++.
T Consensus 297 ~~----~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~ 329 (431)
T PRK15481 297 SA----TSARLRLRLNSGTQWVSHLLQDLVYACLTDP 329 (431)
T ss_pred HH----HHHHHHHHHhccccCCCHHHHHHHHHHHhCc
Confidence 66 4455544434444578999999999999765
No 73
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-35 Score=281.85 Aligned_cols=247 Identities=17% Similarity=0.163 Sum_probs=195.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
..|+|+.|++. ..+++.+.+++.+.+.. .....| +..|.++||+++|+|+.+.++..+++++|++ |+|++
T Consensus 27 ~~i~l~~~~~~-----~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~ 98 (368)
T PRK03317 27 VPVRLNTNENP-----YPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSN 98 (368)
T ss_pred ceeEecCCCCC-----CCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHH
Confidence 56999999862 12356666666654421 123567 5578999999999999888888899999988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++ +..++.|||.|+++.|+|..|...++..|++++.++. .+++++|++.+++++.. .+.++++++|||||
T Consensus 99 ~~l~~~--~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NP 172 (368)
T PRK03317 99 EILQQL--LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAE--HRPDVVFLTSPNNP 172 (368)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCC
Confidence 999988 4444679999999999999999999999999999886 34689999999999874 23456777999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++| ++++|+||+|.+|.+.+. .+...+.+..+++++++||||.||++|+|+||+ +++
T Consensus 173 tG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~----~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~--~~~ 243 (368)
T PRK03317 173 TGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT----PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYL--AAA 243 (368)
T ss_pred CCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC----cCHHHHHHhCCCEEEEEechhhhccchhhhhhh--hCC
Confidence 99999999999997776 699999999999976531 122233344568999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
++ +++.+..... .++++.++|.++..+|+..+
T Consensus 244 -~~----~~~~l~~~~~--~~~~s~~~~~a~~~~l~~~~ 275 (368)
T PRK03317 244 -PA----VVDALRLVRL--PYHLSAVTQAAARAALRHAD 275 (368)
T ss_pred -HH----HHHHHHhcCC--CCCCCHHHHHHHHHHhhCHH
Confidence 66 5565655432 34788999999988887544
No 74
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-34 Score=277.19 Aligned_cols=250 Identities=19% Similarity=0.211 Sum_probs=190.5
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (363)
+.++.+.+... ..++|+|+.|++. ..+++.+.+++.+.... ..+|+ ..|.++||+++|+++. +++
T Consensus 18 ~~~~~~~~~~~-~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------~~~ 82 (357)
T PRK14809 18 IEEVARELGLD-PDDLVKLSSNENP-----HGPSPAAVEAIREAAER--VHSYP-KASHADLTAALADRWD------VSP 82 (357)
T ss_pred HHHHHHHhCCC-ccceeEecCCCCC-----CCCCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHhC------CCc
Confidence 33444444332 2379999999862 12344555665554432 25684 5789999999999962 468
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
++|++ |+|+++++.++. ..++.|||.|++++|+|..|...++..|.+++.++++.++++.++++.+++... +
T Consensus 83 ~~I~i--t~G~~~al~~~~--~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~----~ 154 (357)
T PRK14809 83 EQVWL--ANGGDGALDYLA--RAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD----G 154 (357)
T ss_pred ceEEE--CCCHHHHHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc----C
Confidence 99988 999999998883 444679999999999999999888899999999998654567778887776542 3
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++||||||||.+++.+++++|+++|++ +++||+||+|.+|.+.. +.....+..+++++++||||.||++
T Consensus 155 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~------~~~~~~~~~~~vi~~~SfSK~~~~~ 227 (357)
T PRK14809 155 ERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP------SAVALVEERDDVAVLRTFSKAYGLA 227 (357)
T ss_pred CcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc------hhHHHHhhCCCEEEEecchhHhcCc
Confidence 4577778999999999999999999999875 78999999999998642 1122234567999999999999999
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+|+||+ +++ ++ +++.+.+.. ...+++.++|.++..+|.+
T Consensus 228 GlRiG~~--~~~-~~----~~~~~~~~~--~~~~~~~~~~~~a~~~l~~ 267 (357)
T PRK14809 228 GLRLGYA--VVP-EE----WADAYARVN--TPFAASELACRAGLAALDD 267 (357)
T ss_pred chhheee--ecC-HH----HHHHHHHhC--CCCCCCHHHHHHHHHHhCC
Confidence 9999999 776 55 455555543 2457889999999888764
No 75
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=264.42 Aligned_cols=262 Identities=17% Similarity=0.147 Sum_probs=220.4
Q ss_pred CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
++++++.|.+.+- |.. .++.+.+++++-.+.+. ++|+ .+..++.+++++|..++++..+.++.|++ +.|.
T Consensus 23 g~~DvlPmWVADM-Df~----~pp~i~~Al~~rvdhGv-fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~V 92 (388)
T COG1168 23 GNEDVLPMWVADM-DFP----TPPEIIEALRERVDHGV-FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGV 92 (388)
T ss_pred CCCCcceeeeecc-cCC----CCHHHHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcc
Confidence 4468999999884 433 45677888777776665 7885 67788999999999999999999999988 9999
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc-CCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
--++.++ +..+.+|||.|+|..|.|+++....+..|.+++..|+.. +..+.+|++.||+++.+ .+++++++||||
T Consensus 93 Vpgi~~~--I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCnPH 168 (388)
T COG1168 93 VPGISLA--IRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCNPH 168 (388)
T ss_pred hHhHHHH--HHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeCCC
Confidence 9998888 444467999999999999999999999999999999753 34577799999999985 456899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH-HhcCCeEEEEEcCccccccccccceEEEE
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~~vi~~~S~SK~~~l~G~RvG~i~~ 318 (363)
||||.+++.+|+++|.++|++||+.+|+||+++++.+.+. .+.++..+ ....++++.+.|-||+|+++|++.+++
T Consensus 169 NP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~-- 244 (388)
T COG1168 169 NPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI-- 244 (388)
T ss_pred CCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChhhhcceEEEeeccccccchhhhheeE--
Confidence 9999999999999999999999999999999999999863 23333322 123489999999999999999999999
Q ss_pred eeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccCC
Q 017967 319 VCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRWR 363 (363)
Q Consensus 319 v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w~ 363 (363)
|.+|++..+++.+++.+ ....++|.++..+...+++..+.|+
T Consensus 245 Ii~n~~lr~~~~~~l~~---~~~~~~n~lg~~A~~aAY~~G~~WL 286 (388)
T COG1168 245 IISNRELRAKFLKRLKR---NGLHGPSALGIIATEAAYNQGEPWL 286 (388)
T ss_pred EecCHHHHHHHHHHHHH---hcCCCCchHHHHHHHHHHHhchHHH
Confidence 99999866667666653 4556899999999999999999995
No 76
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=4.2e-35 Score=288.48 Aligned_cols=256 Identities=11% Similarity=0.071 Sum_probs=185.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHH-HHhcCCCCc-ccCC--cEEEEeccc
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE-LLFGADNSV-LKEQ--RVATVQGLS 159 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~-~l~~~~~~~-~~~~--~i~~~~t~g 159 (363)
+.|+|++|++. .+ +.+.+.+....+. . .+|+++.|..++++++++ |+.+..+.. ..++ +|++ |.|
T Consensus 95 ~~i~l~~g~p~-~~----~~~~~~~~~~~~~-~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~G 163 (521)
T TIGR03801 95 DIISYVIDQLG-FD----PDAFLYEMCDGII-G---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VEG 163 (521)
T ss_pred HHHhhcCCCCC-CC----CCHHHHHHHHHhh-c---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 57999999972 22 2334433333322 2 358777788888887775 554443332 2333 8988 999
Q ss_pred hhHHHHHHHHHHH---HhCCCCEEEEcCCCCcchHHHHhhC--CCCeEEEecccCCC-----CCCCHHHHHHHHHcCCCC
Q 017967 160 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKT-----VGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 160 gt~al~l~~~l~~---~~~~gd~Vlv~~P~y~~~~~~~~~~--G~~~~~v~~~~~~~-----~~~d~~~l~~~l~~~~~~ 229 (363)
+++++.++...+. ++.|||+|+++.|+|+.|..+++.. |++++.++.+++++ |.+|++.+++++. ++
T Consensus 164 at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~---~~ 240 (521)
T TIGR03801 164 GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD---PS 240 (521)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC---CC
Confidence 9999988744321 4679999999999999999987754 77888888754333 8899999998765 35
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc--CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
+++++++|||||||.+++.+++++|+++|+++ +++||+||+|.+|.+. +.++... ..+++|+++||||.||
T Consensus 241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~~--~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFAE--LPYNTIGVYSFSKYFG 313 (521)
T ss_pred CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhhh--CCCCEEEEEcchhhcc
Confidence 67888899999999999999999999999986 8999999999998752 2233222 3468999999999999
Q ss_pred cccccceEEEEeeCChhHHHHHH--------------------------------HHHHhhhccccCCCchHHHH-----
Q 017967 308 LYAERIGAMNVVCSSSDLAARVK--------------------------------SQLKRLARPMYSNPPPMLLG----- 350 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~--------------------------------~~l~~~~~~~~~~~s~~~q~----- 350 (363)
++|||+||+ ++++++..++++ ...+.+...+..++|.+.|.
T Consensus 314 ~~G~RlG~i--~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~ 391 (521)
T TIGR03801 314 ATGWRLGTI--ALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALF 391 (521)
T ss_pred Cchhhhhhh--hcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHH
Confidence 999999999 777554333333 33355666677788888887
Q ss_pred HHhccccccccC
Q 017967 351 IQLSSMNGKQRW 362 (363)
Q Consensus 351 ~~~~~l~~~~~w 362 (363)
++..+|+..++|
T Consensus 392 a~~all~~~~~y 403 (521)
T TIGR03801 392 SLFALMDKENAY 403 (521)
T ss_pred HHHHHhccchhH
Confidence 344555544443
No 77
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.3e-34 Score=280.97 Aligned_cols=260 Identities=18% Similarity=0.121 Sum_probs=192.2
Q ss_pred HHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC----CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCc
Q 017967 76 AFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR 151 (363)
Q Consensus 76 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~ 151 (363)
..+...+++.|+|+.|.|. ..+.+.+.+.+++...+... ...+|++..|.++||+++|+++...++..+++++
T Consensus 23 ~~~~~~~~~~i~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~ 99 (416)
T PRK09440 23 LNDGLRTPGAIMLGGGNPA---HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQN 99 (416)
T ss_pred HHHHhcCCCceeccCCCCC---ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhh
Confidence 3333444688999999863 22333456667666655321 2357999999999999999999887888889999
Q ss_pred EEEEeccchhHHHHHHHHHHHHh-----CCCCEEEE-cCCCCcchHHHHhhCCC----CeEEEecccCC-CCCCCHHHHH
Q 017967 152 VATVQGLSGTGSLRLAAALIERY-----FPGAKVLI-SSPTWGNHKNIFNDARV----PWSEYRYYDPK-TVGLDFEGMI 220 (363)
Q Consensus 152 i~~~~t~ggt~al~l~~~l~~~~-----~~gd~Vlv-~~P~y~~~~~~~~~~G~----~~~~v~~~~~~-~~~~d~~~l~ 220 (363)
|++ |+|+++++.++..+ ++ .+||.|++ ++|+|+.|...+...|. ....+++.++. .+++|++.|+
T Consensus 100 I~i--t~Ga~~al~~~~~~--l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 175 (416)
T PRK09440 100 IAL--TNGSQSAFFYLFNL--FAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH 175 (416)
T ss_pred EEE--ccChHHHHHHHHHH--HhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc
Confidence 988 99999999988543 34 26899999 79999999886653332 22222332111 3689999987
Q ss_pred HHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 221 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 221 ~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
+. .+++++++||||||||.+++.+++++|+++|+++|++||+||+|.++.... ...... ....+++|+++
T Consensus 176 --~~---~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~---~~~~~~--~~~~~~vI~~~ 245 (416)
T PRK09440 176 --ID---EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI---IFSEAT--PLWNPNIILCM 245 (416)
T ss_pred --cC---CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc---chhhcC--ccccCCeEEEe
Confidence 22 356788899999999999999999999999999999999999998653210 000100 01247899999
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
||||. ++||+|+||+ +++ ++ +++.+.........++|.++|.+++.+|++.+
T Consensus 246 SfSK~-~~pGlRiG~~--i~~-~~----l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 297 (416)
T PRK09440 246 SLSKL-GLPGVRCGIV--IAD-EE----IIEALSNMNGIISLAPGRLGPAIAAEMIESGD 297 (416)
T ss_pred ccccc-CCCcceEEEE--eCC-HH----HHHHHHHHHHHhccCCCcHHHHHHHHHhccch
Confidence 99996 8999999999 765 66 56666666555566899999999999987653
No 78
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-34 Score=275.99 Aligned_cols=255 Identities=18% Similarity=0.249 Sum_probs=202.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
+++++|+.|.|. ..+++.+.+++....... ...+|.+..|.+++|+++++++...++..+++++|++ |.|+
T Consensus 33 ~~~~~l~~g~p~-----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G~ 105 (394)
T PRK06836 33 DNVFDFSLGNPS-----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCGA 105 (394)
T ss_pred CCeEEecCcCCC-----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCCh
Confidence 468999998752 224677777776665321 2377989999999999999999887788888999988 9999
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
++++.++ +..++.+||.|++++|+|..+...++..|++++.+++++ +++++|++.+++.+++ +++++++++|||
T Consensus 106 ~~al~~~--~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~~~~---~~~~v~~~~p~N 179 (394)
T PRK06836 106 AGALNVA--LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDT-DTFQPDLDALEAAITP---KTKAVIINSPNN 179 (394)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCC-ccCcCCHHHHHhhcCc---CceEEEEeCCCC
Confidence 9999888 344568999999999999999999999999999999853 3578999999998863 466778899999
Q ss_pred CCCCCCCHHHHHHHHHHHHh------cCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccce
Q 017967 241 PTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~------~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
|||.+++.+++++|+++|++ ||++||+||+|.++.+++. ....+ ....+++++++||||.||+||+|+|
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~---~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPYI---FKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCCh---HHccCcEEEEecchhhccCcceeeE
Confidence 99999999999999999999 8999999999999987532 11222 2345689999999999999999999
Q ss_pred EEEEeeCChhHH--HHHHHHHHhhhcc-ccCCCchHHHHHHhccccc
Q 017967 315 AMNVVCSSSDLA--ARVKSQLKRLARP-MYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 315 ~i~~v~~~~~~~--~~~~~~l~~~~~~-~~~~~s~~~q~~~~~~l~~ 358 (363)
|+ +++ ++.. .+++..+....+. .+.+++.+.|.++..++++
T Consensus 255 ~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 298 (394)
T PRK06836 255 YI--AVN-PEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA 298 (394)
T ss_pred EE--ecC-HHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC
Confidence 99 665 4321 1233333333332 2347889999999888765
No 79
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.9e-34 Score=276.09 Aligned_cols=239 Identities=15% Similarity=0.095 Sum_probs=186.3
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCc-ccCCcEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQRVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~-~~~~~i~~~~t~ggt 161 (363)
+++++|+.|.|. ..+++.+.+++.+... ...|.+..|.++||+++++++...++.. +++++|++ |.|++
T Consensus 21 ~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~i--t~G~~ 90 (357)
T TIGR03539 21 DGIVDLSVGTPV-----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLP--VIGTK 90 (357)
T ss_pred CCeEEccCCCCC-----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEE--ccChH
Confidence 378999999863 1235666777665442 2679999999999999999998877876 89999988 99999
Q ss_pred HHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 162 GSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 162 ~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+++.++.. .+ +.+||.|++++|+|+.+...++..|++++.++ +++.++. .+++++++++|||
T Consensus 91 ~~i~~~~~--~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~~------~~~~~v~~~~p~N 153 (357)
T TIGR03539 91 ELVAWLPT--LLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELDP------VGPDLIWLNSPGN 153 (357)
T ss_pred HHHHHHHH--HHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcCc------cCccEEEEeCCCC
Confidence 99888733 23 47999999999999999999999999888774 1222221 2456777899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH---HHhcCCeEEEEEcCccccccccccceEEE
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL---FATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~---~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
|||.+++.+++++|+++|+++|++||+||+|.++.+++. ..+... .....+++++++||||.|+++|+|+||+
T Consensus 154 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~- 229 (357)
T TIGR03539 154 PTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR---PVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFV- 229 (357)
T ss_pred CcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC---CccceecccCCCccccEEEEeccccccCCCceeEEEE-
Confidence 999999999999999999999999999999999887531 111100 0012358999999999999999999999
Q ss_pred EeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 318 VVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++ ++ +++.+.+.......+++.+.|.++..+|++
T Consensus 230 -i~~-~~----~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 264 (357)
T TIGR03539 230 -AGD-PA----LVAELLTVRKHAGLMVPAPVQAAMVAALGD 264 (357)
T ss_pred -ecC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHcCC
Confidence 665 66 555555555555568899999999888865
No 80
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-34 Score=274.92 Aligned_cols=238 Identities=18% Similarity=0.183 Sum_probs=190.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
+.++|+.|++. .+ +++.+.+++.+.... ..|.|..|.+++|+++|+++. +++++|++ |+|++++
T Consensus 30 ~~i~l~~n~~~--~~---~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~--t~G~~~~ 93 (359)
T PRK03158 30 KIVKLASNENP--YG---PSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHLG------VDEEQLLF--GAGLDEV 93 (359)
T ss_pred ceEEecCCCCC--CC---CCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHhC------CCHHHEEE--CCCHHHH
Confidence 78999999863 11 355677777665532 456688899999999999973 34789988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
+.++. ..++.+||.|++++|+|+.+...+...|++++.+|++ ++++|++.+++.+.+ ++++++++|||||||
T Consensus 94 l~~~~--~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~---~~~~v~i~~p~NPtG 165 (359)
T PRK03158 94 IQMIS--RALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDE---QTKIVWICNPNNPTG 165 (359)
T ss_pred HHHHH--HHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCC---CCCEEEEeCCCCCCC
Confidence 98873 3446799999999999999999999999999999984 468999999988753 456777899999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+++.++++.|+ +|++||+||+|.+|.+++. ..+.....+..+++++++||||.||++|+|+||+ +++ +
T Consensus 166 ~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~--v~~-~ 238 (359)
T PRK03158 166 TYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAED---YPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYG--IAS-E 238 (359)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcc---cccHHHHHHhcCCEEEEEechHhhcCcchhhehh--cCC-H
Confidence 9999999999988875 6999999999999987532 1122223355679999999999999999999999 765 6
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+ +++++..... ..+++.++|.++..+|++
T Consensus 239 ~----~~~~~~~~~~--~~~~~~~~q~~~~~~l~~ 267 (359)
T PRK03158 239 E----LIEKLNIARP--PFNTTRIAQYAAIAALED 267 (359)
T ss_pred H----HHHHHHHhcC--CCCCCHHHHHHHHHHhcC
Confidence 6 5566655543 247899999999998864
No 81
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-34 Score=273.34 Aligned_cols=241 Identities=20% Similarity=0.253 Sum_probs=189.7
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+++|+|+.|++. . .+++.+.+++.+.... ..+|++..|. +||+++|+++. +++++|++ |+|+++
T Consensus 36 ~~~i~l~~~~~~--~---~~~~~~~~al~~~~~~--~~~Y~~~~g~-~lr~~ia~~~~------~~~~~i~~--t~G~~~ 99 (371)
T PRK05166 36 PRIAKLGSNENP--L---GPSPAVRRAFADIAEL--LRLYPDPQGR-ALREAIAARTG------VPADRIIL--GNGSED 99 (371)
T ss_pred cceEEcCCCCCC--C---CCCHHHHHHHHHHHHH--hhcCCCCcHH-HHHHHHHHHhC------cCHHHEEE--cCCHHH
Confidence 478999999863 1 2356677776654322 3679888885 99999999962 24789988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++. ..++.+||.|+++.|+|+.+...++..|++++.++++ .++++|++++++.+++ ++++++++||||||
T Consensus 100 ~l~~~~--~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NPt 172 (371)
T PRK05166 100 LIAVIC--RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVAR---APRMLMFSNPSNPV 172 (371)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhhc---CCCEEEEeCCCCCC
Confidence 998884 3446899999999999999999999999999999984 3578999999998874 34567789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
|.+++.+++++|+++|++ +++||+||+|.+|.+++ +..+..... +..+++|+++||||.||++|+|+||+ +++
T Consensus 173 G~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~--i~~ 246 (371)
T PRK05166 173 GSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD---DYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYG--LVS 246 (371)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc---CcccHHHHHhhcCCCEEEEeechHhhhcchhheeee--ecC
Confidence 999999999999999874 88999999999999643 122222222 34568999999999999999999998 676
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++ +++.+.+.. ...+++.++|.++...|..
T Consensus 247 ~~~----l~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 277 (371)
T PRK05166 247 DPE----LVGLLDRVR--TPFNVNGAAQAAALAALDD 277 (371)
T ss_pred CHH----HHHHHHHhc--cCCCCCHHHHHHHHHHhcC
Confidence 677 555555443 2457899999888777654
No 82
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.1e-33 Score=268.68 Aligned_cols=255 Identities=15% Similarity=0.140 Sum_probs=190.4
Q ss_pred CCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCC
Q 017967 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (363)
++.++......++... .+.++|+.|++. ..+++.+.+++.+.... . ..|+ ..+..+||+++|+++.
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~i~l~~~~~~-----~~~p~~~~~a~~~~~~~-~-~~y~-~~~~~~lr~~ia~~~~----- 69 (356)
T PRK08056 4 HGGNIREAATVLGISP-DQLLDFSANINP-----LGMPVSLKRAIIDNLDC-A-ERYP-DVEYRHLHQALARHHQ----- 69 (356)
T ss_pred CCccHHHHHHHhCCCh-hhEEEeccccCC-----CCCCHHHHHHHHHHHHh-c-ccCc-CccHHHHHHHHHHHhC-----
Confidence 3445555555554433 268999998862 22456667776654432 2 4575 4578999999999962
Q ss_pred cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
+++++|++ |.|+++++.++.. .+.+|+ +++++|+|..|...++..|++++.+|+++++++.+| +.+++.+.
T Consensus 70 -~~~~~i~i--t~Ga~~~l~~~~~---~l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~- 140 (356)
T PRK08056 70 -VPASWILA--GNGETESIFAVVS---GLKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT- 140 (356)
T ss_pred -cChhhEEE--CCCHHHHHHHHHH---HhCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-
Confidence 35789988 9999999988843 246776 777899999999999999999999998654456666 34555554
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
+++++++++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++. ...+ .....+++++++||||.
T Consensus 141 --~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~---~~~~~~~~i~~~S~SK~ 213 (356)
T PRK08056 141 --PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDET--GFIP---QLADNPHLWVLRSLTKF 213 (356)
T ss_pred --CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcch--HHHH---HhccCCCEEEEEechhh
Confidence 3456777899999999999999999999999999999999999999986431 1111 22345789999999999
Q ss_pred cccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
||++|+|+||+ ++++++ +++.+++.. ...+++.++|.++..+|+.
T Consensus 214 ~~~~G~RiG~~--v~~~~~----~~~~l~~~~--~~~~~~~~~~~~a~~~l~~ 258 (356)
T PRK08056 214 YAIPGLRLGYL--VNSDDA----AVARMRRQQ--MPWSINAFAALAGEVILQD 258 (356)
T ss_pred ccCcchhheee--ecCCHH----HHHHHHHhC--CCCchhHHHHHHHHHHhCC
Confidence 99999999999 776666 445555432 3457788999988887753
No 83
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.2e-33 Score=268.93 Aligned_cols=236 Identities=14% Similarity=0.101 Sum_probs=177.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
+.|+|+.|++. ..+++.+.+++.+.... ..+|++. +..+||+++|+++ .+++++|++ |+|++++
T Consensus 23 ~~i~l~~~~n~-----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~i--t~G~~~~ 86 (360)
T PRK07392 23 AILDFSASINP-----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILP--GNGAAEL 86 (360)
T ss_pred cEEEeCCcCCC-----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEE--CCCHHHH
Confidence 68999988752 22456666666554432 3678654 5689999999997 246899988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCC---CCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV---GLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~---~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+.++.. .+.+||.|++++|+|..|...++..|++++.++++++..+ ..+++.+++.. ++++++++|||||
T Consensus 87 i~~~~~---~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~nP~N 159 (360)
T PRK07392 87 LTWAGR---ELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNNPHN 159 (360)
T ss_pred HHHHHH---HhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc----cCCCEEEEeCCCC
Confidence 988833 3457899999999999999999999999999998543322 23555554432 2467888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+++.++ ++++++ +|+||+|.+|.+++. ..+.....+..+++++++||||.||++|+|+||+ ++
T Consensus 160 PTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~~---~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~--v~ 230 (360)
T PRK07392 160 PTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPDA---EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYA--IA 230 (360)
T ss_pred CCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCcc---ccchHHHhhcCCCEEEEEechhhhcCCchheeee--eC
Confidence 99999998776655 667775 666999999987531 2233333455679999999999999999999999 77
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+ ++ +++.+.+.. ...+++.++|.++..+|++
T Consensus 231 ~-~~----~~~~~~~~~--~~~~~s~~~q~~~~~~l~~ 261 (360)
T PRK07392 231 H-PD----RLQRWQQWR--DPWPVNGLAAAAAIAALAD 261 (360)
T ss_pred C-HH----HHHHHHhhC--CCCCCCHHHHHHHHHHhcc
Confidence 6 55 445555443 2357999999999998875
No 84
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-33 Score=269.80 Aligned_cols=234 Identities=18% Similarity=0.129 Sum_probs=184.1
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+|+.|++. ..+++.+.+++.... ....| |..+..+||+++++++. +++++|++ |.|+++
T Consensus 52 ~~~i~l~~n~~p-----~~~~~~v~~a~~~~~---~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~~--t~Ga~~ 114 (380)
T PLN03026 52 EDIVKLDANENP-----YGPPPEVLEALGNMK---FPYVY-PDPESRRLRAALAEDSG------LESENILV--GCGADE 114 (380)
T ss_pred cceEEccCCCCC-----CCCCHHHHHHHHhhH---hhccC-CCCCHHHHHHHHHHHhC------cChhhEEE--cCCHHH
Confidence 479999999852 123455666664421 11346 45678999999999973 35789988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++. ...+.+||+|++++|+|+.|...++..|++++.++.+ +++++|++.+++.+.. +++++++++||||||
T Consensus 115 ~i~~~~--~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~P~NPT 188 (380)
T PLN03026 115 LIDLLM--RCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVET--HKPKLLFLTSPNNPD 188 (380)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhc--cCCcEEEEeCCCCCC
Confidence 998883 3446799999999999999999999999999999983 4578999999998842 346688889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|++.+ +++|+||+|.+|.+.. .. ....+..+++++++||||.||++|+|+||+ +++
T Consensus 189 G~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~--~~~- 255 (380)
T PLN03026 189 GSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---SR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYG--AFP- 255 (380)
T ss_pred CCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---ch---HHHHHhCCCEEEEecchHhhcCccccceee--ecC-
Confidence 9999999999998653 8999999999997642 11 122345689999999999999999999999 665
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+.+... ..+++.++|.++..+|++
T Consensus 256 ~~----~i~~l~~~~~--~~~~~~~~q~aa~~aL~~ 285 (380)
T PLN03026 256 LS----IIEYLWRAKQ--PYNVSVAAEVAACAALSN 285 (380)
T ss_pred HH----HHHHHHHhcC--CCCCCHHHHHHHHHHhhC
Confidence 66 5666665543 347889999999888865
No 85
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-33 Score=269.32 Aligned_cols=234 Identities=18% Similarity=0.167 Sum_probs=182.8
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+|+.|++. ..+++.+.+++.+...... ..|+ ..|.++||+++|+++. +++++|++ |.|+++
T Consensus 24 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~~~~-~~y~-~~~~~~lr~aia~~~~------~~~~~I~i--t~G~~~ 88 (353)
T PRK05387 24 AKLIKLNTNENP-----YPPSPKVLEAIRAALGDDL-RLYP-DPNADALRQAIAAYYG------LDPEQVFV--GNGSDE 88 (353)
T ss_pred cceeeccCCCCC-----CCCCHHHHHHHHHHhhhhh-hcCC-CCcHHHHHHHHHHHhC------CCHHHEEE--cCCHHH
Confidence 368999999862 1235677777766553322 5685 4467999999999973 45889988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++. ..++.+||.|++++|+|+.|...++..|++++.++++ +++++|++.+++ ...+++++||||||
T Consensus 89 al~~~~--~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~-------~~~~v~~~~P~NPt 157 (353)
T PRK05387 89 VLAHAF--LAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR-------PNGGIIFPNPNAPT 157 (353)
T ss_pred HHHHHH--HHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh-------cCCEEEEeCCCCCC
Confidence 999984 4457899999999999999999999999999999984 357899998863 13467789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|++.++ ++++|+||+|.+|... . ...+.+..+++++++||||.||++|+|+||+ +++
T Consensus 158 G~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~---~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~--~~~- 225 (353)
T PRK05387 158 GIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----S---AIPLIDRYPNLLVVQTFSKSRSLAGLRVGFA--IGH- 225 (353)
T ss_pred CCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----c---hHHHHhhCCCEEEEEehhHhhcchhhhceee--ecC-
Confidence 99999999999988643 8999999999887422 1 1122345578999999999999999999999 665
Q ss_pred hhHHHHHHHHHHhhhccc-cCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPM-YSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~-~~~~s~~~q~~~~~~l~~ 358 (363)
++ ++++++...... ..+++.++|.++..+|.+
T Consensus 226 ~~----~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~ 258 (353)
T PRK05387 226 PE----LIEALNRVKNSFNSYPLDRLAQAGAIAAIED 258 (353)
T ss_pred HH----HHHHHHHhhccCCCCCcCHHHHHHHHHHhcC
Confidence 66 556665554332 346889999999888764
No 86
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.3e-33 Score=269.62 Aligned_cols=235 Identities=17% Similarity=0.159 Sum_probs=184.3
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
++.++|+.|++. ..+++.+.+++.+.... . ..|++. +.++||+++++++. +++++|++ |.|+++
T Consensus 43 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~~-~-~~Y~~~-~~~~Lr~aia~~~~------v~~e~I~i--t~Gs~~ 106 (370)
T PRK09105 43 EGAVFLNANECP-----LGPSPAARDAAARSAAL-S-GRYDLE-LEDDLRTLFAAQEG------LPADHVMA--YAGSSE 106 (370)
T ss_pred CCcEEecCCCCC-----CCCCHHHHHHHHHHHHH-h-cCCCCc-hHHHHHHHHHHHhC------cChhhEEE--cCChHH
Confidence 578999998852 22456666666554432 1 357544 48999999999852 35899988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++ +..++.+||+|++++|+|+.|...++..|++++.++++ .++.+|++.+++. . ++++++++|||||||
T Consensus 107 ai~~~--~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~-~---~~~~~v~l~nP~NPT 178 (370)
T PRK09105 107 PLNYA--VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLR--ADGAHDVKAMLAA-D---PNAGLIYICNPNNPT 178 (370)
T ss_pred HHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHhc-C---CCCCEEEEeCCCCCC
Confidence 99988 44456799999999999999999999999999999984 3578899999875 2 246678889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|++.++ +++++|+||+|.+|... .+...+.+..+++++++||||.||++|+|+||+ +++
T Consensus 179 G~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~------~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~--v~~- 248 (370)
T PRK09105 179 GTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA------PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLA--AAR- 248 (370)
T ss_pred CcCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC------cchHHHHhhCCCEEEEecccHhhcCCccceeee--ecC-
Confidence 99999999999998754 59999999999887532 133344455689999999999999999999999 765
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+... ....++.+.|.++...|.+
T Consensus 249 ~~----~i~~l~~~---~~~~~~~~~~~aa~~~L~~ 277 (370)
T PRK09105 249 PD----LLAKLARF---GHNPLPVPAAAAGLASLRD 277 (370)
T ss_pred HH----HHHHHHhc---CCCCcCHHHHHHHHHHHhC
Confidence 66 45555544 2346888899988887765
No 87
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-33 Score=264.95 Aligned_cols=232 Identities=18% Similarity=0.207 Sum_probs=180.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
+.|+|+.|++. ..+++.+.+++.+.+.......| +..|.++||+++++++. +++++|++ |+|++++
T Consensus 19 ~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y-~~~g~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~ 84 (337)
T PRK03967 19 YRIWLDKNENP-----FDLPEELKEEIFEELKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAV--GNGSDEL 84 (337)
T ss_pred ceEEecCCCCC-----CCCCHHHHHHHHHHhhcCccccC-CCCCHHHHHHHHHHHhC------cCcceEEE--cCCHHHH
Confidence 67999988852 12345666666555432223567 45799999999999974 45799988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
+.++. ..+ +||+|+++.|+|+.|...++..|++++.++++ +++++|++.+++.+. ++++++++|||||||
T Consensus 85 l~~~~---~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~----~~~~v~~~~P~NPtG 154 (337)
T PRK03967 85 ISYLV---KLF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKAK----NASAVFICSPNNPTG 154 (337)
T ss_pred HHHHH---HHh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhcc----CCCEEEEeCCCCCCC
Confidence 87763 223 79999999999999999899999999999984 357899999987643 344666799999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+++.+++ ++++++|+||+|.+|... +...+.+..+++|+++||||.||++|+|+||+ +++ +
T Consensus 155 ~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~-------~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~i--v~~-~ 220 (337)
T PRK03967 155 NLQPEEEILKVL----ETGKPVVLDEAYAEFSGK-------SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYA--IAN-E 220 (337)
T ss_pred CCCCHHHHHHHH----hcCCEEEEECchhhhccc-------chHHHHhhCCCEEEEecchHhhcchhhhheee--ecC-H
Confidence 999998887764 479999999999998632 11223345578999999999999999999999 665 6
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+ +++.+.+... ..+++.++|.++..+|+..
T Consensus 221 ~----~i~~~~~~~~--~~~~~~~~q~~~~~~l~~~ 250 (337)
T PRK03967 221 E----IIDALYRIKP--PFSLNILTMKIVRLALDHY 250 (337)
T ss_pred H----HHHHHHhhcC--CCCCCHHHHHHHHHHHhCH
Confidence 6 5666666543 2478899999999888753
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-33 Score=268.90 Aligned_cols=240 Identities=13% Similarity=0.106 Sum_probs=186.2
Q ss_pred CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 80 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 80 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
.+....++|+.|++. ..+++.+.+++.+.... ...|++. +..+||+++|+++. +++++|++ |+|
T Consensus 29 ~g~~~~~~l~~~~~~-----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~~------~~~~~I~i--t~G 92 (369)
T PRK08153 29 RGRPFRARIGANESG-----FGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHHG------VAPENIMV--GEG 92 (369)
T ss_pred cCCcceeEecCCCCC-----CCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHhC------CCHHHEEE--cCC
Confidence 344456899999862 12345566665544322 2568655 57899999999962 45789988 999
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
+++++.++. ...+.|||.|++++|+|+.+...++..|.+++.+|+++ .++|++.+++.+.. .+++++++||||
T Consensus 93 ~~~~l~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~--~~~~~i~l~~P~ 165 (369)
T PRK08153 93 IDGLLGLIV--RLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARR--ENAPLVYLANPD 165 (369)
T ss_pred HHHHHHHHH--HHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcc--cCCcEEEEeCCC
Confidence 999998883 33467999999999999999999999999999999842 36889988877653 345677779999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEe
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||||.+++.+++.+|+++|+ ++++||+||+|.++.+++. ..+ +....+++++++||||.||++|+|+||+ +
T Consensus 166 NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~---~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~--v 236 (369)
T PRK08153 166 NPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA---APP---IDTDDPNVIRMRTFSKAYGLAGARVGYA--I 236 (369)
T ss_pred CCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc---chh---hhhcCCCEEEEecchHhccCcchheeee--e
Confidence 99999999999999999887 4999999999999986531 222 2233578999999999999999999999 7
Q ss_pred eCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 320 CSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ ++ +++.+.+... ..+++.++|.++..+|++
T Consensus 237 ~~-~~----~~~~l~~~~~--~~~~s~~~q~~~~~~l~~ 268 (369)
T PRK08153 237 GA-PG----TIKAFDKVRN--HFGMNRIAQAAALAALKD 268 (369)
T ss_pred cC-HH----HHHHHHHhhc--CCCCCHHHHHHHHHHhcC
Confidence 75 66 5555655543 247899999999998864
No 89
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-33 Score=265.69 Aligned_cols=237 Identities=20% Similarity=0.164 Sum_probs=186.0
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+++|+|+.|++. ..+++.+.+++...+.......|++ .|.++||+++|+++... ..++|++ |.|+++
T Consensus 26 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~-----~~~~I~~--t~G~~~ 92 (356)
T PRK04870 26 TGMVKLDAMENP-----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVP-----AGADVLL--GNGSDE 92 (356)
T ss_pred CCceeCcCCCCC-----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcC-----CCCcEEE--cCCHHH
Confidence 479999998861 2346777777776554333367865 68899999999997422 1258877 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++. ..++.+||+|++++|+|..|...++..|++++.++++ +++++|++.+++.+.. .++++++++||||||
T Consensus 93 ~i~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~p~NPt 166 (356)
T PRK04870 93 LIQLLA--LACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAE--HRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHHH--HHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc--CCCCEEEEcCCCCCC
Confidence 988884 3346799999999999999999999999999999984 3588999999999864 245677779999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++| ++++|+||+|.+|.+.+ ..+ .....+++++++|||| ++++|+|+||+ +++
T Consensus 167 G~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~----~~~---~~~~~~~vi~~~S~SK-~~~~GlRiG~~--i~~- 232 (356)
T PRK04870 167 GNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS----WLP---RLARFPNLLVMRTVSK-LGLAGLRLGYL--AGH- 232 (356)
T ss_pred CCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc----hHH---HHhhCCCEEEEecchh-hhhHHHhhhhh--hCC-
Confidence 9999999999999988 77899999999987532 111 1245578999999999 89999999999 665
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+..... ..+++.++|.++..+++.
T Consensus 233 ~~----~i~~~~~~~~--~~~~~~~~q~~a~~~l~~ 262 (356)
T PRK04870 233 PA----WIAELDKVRP--PYNVNVLTQATALFALEH 262 (356)
T ss_pred HH----HHHHHHHccC--CCcCCHHHHHHHHHHHhC
Confidence 66 5566655432 346888999988777754
No 90
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.7e-33 Score=261.91 Aligned_cols=236 Identities=19% Similarity=0.225 Sum_probs=191.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++++|+.+++. ..+++.+.++.....+ ..+.| |.....++++++++++.. +++++|++ ++|+++.
T Consensus 23 ~~i~LssNenP-----~gp~~~~~~~~~~~~~--~~~rY-Pd~~~~~l~~a~a~~~~~-----~~~~~V~~--gnGsde~ 87 (356)
T COG0079 23 GIIKLSSNENP-----YGPPPKVIEAIRAALD--KLNRY-PDPDYRELRAALAEYYGV-----VDPENVLV--GNGSDEL 87 (356)
T ss_pred cceeecCCCCC-----CCCCHHHHHHHHHHHH--hhccC-CCCcHHHHHHHHHHHhCC-----CCcceEEE--cCChHHH
Confidence 68999987752 1123666666555443 22667 555889999999999753 34789988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
++++. ...+.+||+|+++.|+|..|...++..|++++.++.. + +.+|++.+.+.+.+ ++.++++||||||||
T Consensus 88 i~~l~--~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~--~-~~~d~~~~~~~~~~---~~~lv~i~nPNNPTG 159 (356)
T COG0079 88 IELLV--RAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK--E-FRLDLDAILAAIRD---KTKLVFLCNPNNPTG 159 (356)
T ss_pred HHHHH--HHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEeccc--c-cccCHHHHHHhhhc---CCCEEEEeCCCCCCC
Confidence 99994 4446799999999999999999999999999999984 2 89999999998884 466888899999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
..++.++++++++.+.+ +.++|+||+|.+|... +...+....+++++++||||.||++|+|+||+ ++ ++
T Consensus 160 ~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-------~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~--ia-~~ 228 (356)
T COG0079 160 TLLPREELRALLEALPE-GGLVVIDEAYIEFSPE-------SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYA--IA-NP 228 (356)
T ss_pred CCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-------hhhhhccCCCCEEEEEecHHhhhcchhceeec--cC-CH
Confidence 99999999999999988 9999999999999862 22223345678999999999999999999999 55 47
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+ +++.+++... -++.+.++|.++..+|.+.
T Consensus 229 ~----~i~~l~~vr~--p~~v~~~a~~aa~aal~~~ 258 (356)
T COG0079 229 E----LIAALNKVRP--PFNVSSPALAAAIAALRDA 258 (356)
T ss_pred H----HHHHHHHhcC--CCCCCHHHHHHHHHHcccH
Confidence 7 7777777643 3488999999998877765
No 91
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-32 Score=263.40 Aligned_cols=247 Identities=19% Similarity=0.240 Sum_probs=195.8
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.+.|+|+.|.+. ..+++.+.+++.+.........|.+..|.++||+++|+++. +++++|++ |.|+++
T Consensus 28 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~------~~~~~v~~--~~g~t~ 94 (380)
T PRK06225 28 KEMIWMGQNTNH-----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALI--TAGATE 94 (380)
T ss_pred CCeEEccCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcC------CCCCcEEE--eCCHHH
Confidence 378999988752 33467788888777654434678888999999999999963 34678988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc-CCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++.++. ..++.+||+|++++|+|..+...++..|++++.++++. ++++++|++.+++.+.+ +++++++++||||
T Consensus 95 al~~~~--~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~Np 169 (380)
T PRK06225 95 SLYLVM--RAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE---NTRLIYLIDPLNP 169 (380)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC---CceEEEEeCCCCC
Confidence 999884 34467999999999999999999999999999999743 33578999999998863 4567777899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|+++|+||+|.+|..+. .....+ ..++++++.||||.||++|+|+||+ +++
T Consensus 170 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-----~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i--~~~ 240 (380)
T PRK06225 170 LGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH-----TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAV--VAT 240 (380)
T ss_pred CCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC-----Cchhhc--CCCCEEEEeechhhcCCccceeEEE--ecC
Confidence 9999999999999999999999999999999886432 112212 2368999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+..... ...+++.++|.++...|...++|
T Consensus 241 -~~----l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~ 275 (380)
T PRK06225 241 -PD----LIEVVKSIVI-NDLGTNVIAQEAAIAGLKVKDEW 275 (380)
T ss_pred -HH----HHHHHHHHHh-cccCCCHHHHHHHHHHHhcchHH
Confidence 66 4555554432 34577889999988777655444
No 92
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.6e-32 Score=285.81 Aligned_cols=232 Identities=10% Similarity=0.050 Sum_probs=180.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC-CcEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (363)
+++|+|++|++. ..+++.+.+++.+..... .| ..|.+++|+++++++.+.+|...++ ++|++ ++|++
T Consensus 697 ~~vI~LsinE~d-----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~Gs~ 764 (1082)
T PLN02672 697 SSLIHMDVDESF-----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GDTSL 764 (1082)
T ss_pred CCEEEEeCCCCC-----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eCCHH
Confidence 489999999862 224667777776654321 22 3356788999999998888887764 58877 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC-C
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH-N 240 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~-N 240 (363)
+++.++ +..++.|||.|+++.|+|+.|...++..|++++.+|+++++++.+|++.++++++.. +...++++||| |
T Consensus 765 elL~ll--l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~--~~~~I~L~nPnhN 840 (1082)
T PLN02672 765 ALFNKL--VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV--KKPWVYISGPTIN 840 (1082)
T ss_pred HHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC--CCCEEEEECcCCC
Confidence 998777 455578999999999999999999999999999999965567899999999998631 23356678996 9
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH---hc---CCeEEEEEcCccccccccccce
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA---TR---GMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~---~~---~~~vi~~~S~SK~~~l~G~RvG 314 (363)
|||.+++.+++++|+++|++||++||+||+|.++.|++......+..... +. ..+|++++||||.|+++|+|+|
T Consensus 841 PTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIG 920 (1082)
T PLN02672 841 PTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFG 920 (1082)
T ss_pred CcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHhe
Confidence 99999999999999999999999999999999998864211111121111 11 2379999999999999999999
Q ss_pred EEEEeeCChhHHHHHHHHHHhh
Q 017967 315 AMNVVCSSSDLAARVKSQLKRL 336 (363)
Q Consensus 315 ~i~~v~~~~~~~~~~~~~l~~~ 336 (363)
|+ ++++++ +++.+...
T Consensus 921 yl--Iap~~e----Li~~l~~~ 936 (1082)
T PLN02672 921 FL--ALNDSV----LIDAFHSA 936 (1082)
T ss_pred eE--EeCCHH----HHHHHHHh
Confidence 99 887776 45555443
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-32 Score=257.85 Aligned_cols=237 Identities=17% Similarity=0.132 Sum_probs=183.7
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+..++|+.|++. ..+++.+.++..+.+......+|++ .+..+||+++|+++. +++++|++ |.|+++
T Consensus 22 ~~~~~l~~~~~~-----~~~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~------~~~~~i~i--t~G~~~ 87 (351)
T PRK14807 22 PYKYKMDANETP-----FELPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCS------VVPTNIFV--GNGSDE 87 (351)
T ss_pred CceeEccCCCCC-----CCCCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhC------CCcccEEE--ecCHHH
Confidence 356889988862 2245677777766554323356754 457899999999962 34789988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++.. .++.+||+|+++.|+|..+...++..|++++.++++ +++++|++.+++.++. .++++++++||||||
T Consensus 88 ~l~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~--~~~k~v~l~~p~NPt 161 (351)
T PRK14807 88 IIHLIML--AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEK--YQPKLVFLCNPNNPT 161 (351)
T ss_pred HHHHHHH--HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhc--cCCCEEEEeCCCCCC
Confidence 9988843 447899999999999999999999999999999984 3578999999998873 245677778999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++.++++ +++.++|+||+|.++. +. ...+ +.+..+++++++||||.||++|+|+||+ +++
T Consensus 162 G~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~-~~---~~~~---~~~~~~~vi~~~S~SK~~~~~GlRiG~~--v~~- 228 (351)
T PRK14807 162 GSVIEREDIIKIIE---KSRGIVVVDEAYFEFY-GN---TIVD---VINEFENLIVLRTLSKAFGLAGLRVGYA--VAN- 228 (351)
T ss_pred CCCCCHHHHHHHHH---hCCCEEEEeCcchhhc-cc---chHH---HhhhCCCEEEEecchHhcccchhceeee--ecC-
Confidence 99999999888754 5567899999999874 21 1112 2345579999999999999999999999 665
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.++..+. ..+++.++|.++..+|++
T Consensus 229 ~~----~~~~~~~~~~--~~~~~~~~q~~~~~~l~~ 258 (351)
T PRK14807 229 EN----ILKYLNLVKS--PYNINSLSQVIALKVLRT 258 (351)
T ss_pred HH----HHHHHHHccC--CCCcCHHHHHHHHHHHhH
Confidence 66 5666665543 356789999999888864
No 94
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-32 Score=258.04 Aligned_cols=229 Identities=15% Similarity=0.113 Sum_probs=173.4
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.+.|+|+.|++. ..+++.+.+++.+.........|+ ..|.++||+++++++...+ +++++|++ |+|+++
T Consensus 19 ~~~i~l~~~~~~-----~~~p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~~---~~~~~i~i--t~Ga~~ 87 (335)
T PRK14808 19 RDRTYLALNENP-----FPFPEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTDF---LSKNNVSV--GNGADE 87 (335)
T ss_pred CceeEecCCCCC-----CCCCHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCCC---CCcceEEE--cCCHHH
Confidence 378999999862 223456666665544332223364 4589999999999986542 67899988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++.. .+ |.|++++|+|+.|...++..|++++.+|+++ ++.++... +. .++++++|||||||
T Consensus 88 ~i~~~~~---~~---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~~----~~~~i~i~nP~NPT 151 (335)
T PRK14808 88 IIYVMML---MF---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----VG----EGDVVFIPNPNNPT 151 (335)
T ss_pred HHHHHHH---Hh---CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----cc----CCCEEEEeCCCCCC
Confidence 9988843 23 7899999999999999999999999999843 34444221 22 24678889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+ +++++||+||+|.+|... ... .+....+++++++||||.||++|+|+||+ +++
T Consensus 152 G~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~---~~~~~~~~vi~~~S~SK~~~l~GlRvG~~--v~~- 217 (335)
T PRK14808 152 GHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYV---DLLKKYENLAVIRTFSKAFSLAAQRIGYV--VSS- 217 (335)
T ss_pred CCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chH---HHHHhCCCEEEEEechhhccCcccceEEE--EeC-
Confidence 9999999999986 479999999999998521 111 22345579999999999999999999999 776
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+.+... ..+++.++|.++..+++.
T Consensus 218 ~~----~~~~l~~~~~--~~~~~~~~q~a~~~~l~~ 247 (335)
T PRK14808 218 EK----FIDAYNRVRL--PFNVSYVSQMFAKVALDH 247 (335)
T ss_pred HH----HHHHHHHhcC--CCCCCHHHHHHHHHHHhC
Confidence 56 5666665542 357889999998877764
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-32 Score=262.49 Aligned_cols=243 Identities=18% Similarity=0.211 Sum_probs=189.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++|+|+.|.+. ..+++.+.+++.+.... . ..| +..|..++|+++|+++. +++++|++ |.|++++
T Consensus 23 ~~i~l~~~~~~-----~~~~~~~~~a~~~~~~~-~-~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~--~~G~~~~ 86 (352)
T PRK03321 23 GAIKLSSNETP-----FGPLPSVRAAIARAAAG-V-NRY-PDMGAVELRAALAEHLG------VPPEHVAV--GCGSVAL 86 (352)
T ss_pred cceeccCCCCC-----CCCCHHHHHHHHHHHHh-c-CcC-CCCcHHHHHHHHHHHhC------cCHHHEEE--CCCHHHH
Confidence 68999998862 11355777777665432 2 457 56799999999999974 34789988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
+.++. ...+.|||.|+++.|+|..|...++..|++++.++++ .++++|++.+++.++. +++++++++||||||
T Consensus 87 l~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NPtG 159 (352)
T PRK03321 87 CQQLV--QATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT--PDHTHDLDAMAAAITD---RTRLIFVCNPNNPTG 159 (352)
T ss_pred HHHHH--HHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC--CCCCCCHHHHHHhhcc---CCCEEEEeCCCCCcC
Confidence 88773 3346799999999999999999999999999999984 2478999999998863 455677789999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+++.++++.+ ++++++|+||+|.+|.+++.. ..++. ..+..+++++++||||.||++|+|+||+ +++ +
T Consensus 160 ~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~--~~~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~--v~~-~ 232 (352)
T PRK03321 160 TVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDV--PDGLE-LVRDHPNVVVLRTFSKAYGLAGLRVGYA--VGH-P 232 (352)
T ss_pred CCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCC--CcHHH-HHhhCCCEEEEecchHHhhhHHHhhhhh--cCC-H
Confidence 999999999998865 479999999999999876421 12222 2345579999999999999999999999 765 6
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+ +++.+.+.. ...+++.++|.++...|...++|
T Consensus 233 ~----~~~~~~~~~--~~~~~s~~~q~~a~~~l~~~~~~ 265 (352)
T PRK03321 233 E----VIAALRKVA--VPFSVNSLAQAAAIASLAAEDEL 265 (352)
T ss_pred H----HHHHHHHhc--CCCCCCHHHHHHHHHHhcCHHHH
Confidence 6 555555442 34588999999887777655444
No 96
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-31 Score=248.08 Aligned_cols=225 Identities=17% Similarity=0.152 Sum_probs=185.8
Q ss_pred CCCCCCCcchHHHHHHHHHHHh-cCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC
Q 017967 119 NKEYLPIEGLAAFNKVTAELLF-GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA 197 (363)
Q Consensus 119 ~~~Y~~~~G~~~lr~aia~~l~-~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~ 197 (363)
.++|++..|.++|+..+.++.. ..+.+.+.+++|++ |.|.|.+++.+. ..++++||.|+|+.++|+......+..
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~l--~~~~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKVL--RTLINRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHHH--HHhhcCCCceEEecccchHHHHhcccc
Confidence 3899999999999999999754 45667778889988 999999999994 445789999999999999999999999
Q ss_pred CCCeEEEecccCCCCCCCHHHHHHHHHc-------CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 198 RVPWSEYRYYDPKTVGLDFEGMIADIKA-------APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 198 G~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
|+++++|+++ ..|+++|.|++.+.. ++++.++|.|++.|||||.+++.+++++|+++||+|+++||+||.
T Consensus 169 gv~~ipv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 169 GVKIIPVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CceEEecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 9999999984 459999999998876 345789999999999999999999999999999999999999999
Q ss_pred CCCCcCCCC------CCchhHHHHHH----------hcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHH
Q 017967 271 YQGFASGSL------DNDASSVRLFA----------TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 271 y~~~~~~~~------~~~~~~~~~~~----------~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~ 334 (363)
|.-+.++.. +.+..+.+.|. +...+||-..||||.++ ||+|+||+ .+ ++- ++++..
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~i--t~-~~~----~l~ril 317 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWI--TG-NSL----FLKRIL 317 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEe--ec-CHH----HHHHHh
Confidence 987776521 11122222332 44579999999999997 99999999 44 455 445444
Q ss_pred hhhccccCCCchHHHHHHhccccc
Q 017967 335 RLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 335 ~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
........++|.++|.++..+|+.
T Consensus 318 ~~ae~~t~~pSg~sq~iv~a~l~~ 341 (472)
T KOG0634|consen 318 DLAEVATSGPSGFSQGIVYAMLKR 341 (472)
T ss_pred hhcceeecCcccccHHHHHHHHHH
Confidence 555667778999999999877653
No 97
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-31 Score=251.28 Aligned_cols=215 Identities=14% Similarity=0.146 Sum_probs=166.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++|+|+.|++ +..++.+.+++.+..+. ...|+. ...+|+++++++. ++|++ |+|++++
T Consensus 9 ~~i~l~~~~n------p~~p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~v--t~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVN------PYPPEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVI--TAGITEA 66 (311)
T ss_pred ceeEecCCCC------CCCCHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEE--CCCHHHH
Confidence 7899998874 22345666666554432 245743 4679999999862 47877 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
+.++. ..+.+||+|++++|+|+.|...++..|++++.+ ++|++.+++.++ ++.+++++|||||||
T Consensus 67 l~~~~---~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~----~~~~vi~~~P~NPTG 131 (311)
T PRK08354 67 LYLIG---ILALRDRKVIIPRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE----RNSVVFFCNPNNPDG 131 (311)
T ss_pred HHHHH---HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc----CCCEEEEecCCCCCC
Confidence 88773 334589999999999999999999999999765 357888988775 234677799999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+++++|+++|+++|+++|+||+|.+|.+++. + ...+++++++||||.||++|+|+||+ ++.
T Consensus 132 ~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~-----~-----~~~~~vi~~~S~SK~~~l~GlRiG~~--v~~-- 197 (311)
T PRK08354 132 KFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE-----S-----PEGENIIKLRTFTKSYGLPGIRVGYV--KGF-- 197 (311)
T ss_pred CccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc-----c-----cCCCcEEEEeccHhhcCCccceeeee--eeh--
Confidence 999999999999999999999999999999987631 1 12578999999999999999999999 551
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++.+++... ....+..+|.++..+++
T Consensus 198 ------~~~l~~~~~--~~~~~~~~~~~~~~~~~ 223 (311)
T PRK08354 198 ------EEAFRSVRM--PWSIGSTGYAFLEFLIE 223 (311)
T ss_pred ------HHHHHHcCC--CccCCHHHHHHHHHHHH
Confidence 334444433 23555677777776655
No 98
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-31 Score=256.16 Aligned_cols=211 Identities=19% Similarity=0.246 Sum_probs=169.7
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDAR 198 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G 198 (363)
.+|++. +..+||+++|+++. +++++|++ |+|+++++.++. ..++.+| |.|++++|+|..|...++..|
T Consensus 54 ~~Y~~~-~~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~l~~~~--~~~~~~g~~~vlv~~p~y~~~~~~~~~~g 122 (364)
T PRK04781 54 RRYPDP-QPPGLRSALAALYG------CAPEQLLI--GRGSDEAIDLLV--RALCVPGRDAVLVTPPVFGMYAVCARLQN 122 (364)
T ss_pred ccCCCC-CHHHHHHHHHHHhC------cChHHEEE--eCCHHHHHHHHH--HHhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence 567544 47999999999973 35789988 999999999884 3445688 799999999999999899999
Q ss_pred CCeEEEeccc-CCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 199 VPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 199 ~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
++++.+|+++ ++++.+|++.+++.+.. +++++++++|||||||.+++.+++++|++.|+ ++++||+||+|.+|.+.
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV 199 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC
Confidence 9999999843 23466789998766542 34667777999999999999999999999886 47899999999999853
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
. +...+.+..+++++++||||.||++|+|+||+ +++ ++ +++.+.+... ..+.+.++|.++..+|+
T Consensus 200 ~------~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~--v~~-~~----l~~~l~~~~~--~~~~~~~~~~~a~~~l~ 264 (364)
T PRK04781 200 P------SAVGLLARYDNLAVLRTLSKAHALAAARIGSL--IAN-AE----LIAVLRRCQA--PYPVPTPCAALAEQALS 264 (364)
T ss_pred c------chHHHHhhCCCEEEEecChhhcccccceeeee--eCC-HH----HHHHHHhccC--CCCCCHHHHHHHHHHHh
Confidence 1 22233456689999999999999999999999 765 66 6666666643 34788999999888887
Q ss_pred cc
Q 017967 358 GK 359 (363)
Q Consensus 358 ~~ 359 (363)
+.
T Consensus 265 ~~ 266 (364)
T PRK04781 265 AP 266 (364)
T ss_pred cc
Confidence 54
No 99
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.98 E-value=3.9e-31 Score=250.48 Aligned_cols=217 Identities=14% Similarity=0.114 Sum_probs=164.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++|+|+.+++.. ++ +++.+.+. .. ..|+. +..+||+++++++. +++|++ |+|++++
T Consensus 21 ~~i~l~~ne~p~--~~--~~~~~~~~---~~-----~~yp~--~~~~Lr~~ia~~~~--------~~~I~i--t~Gs~~a 76 (330)
T PRK05664 21 DWLDLSTGIAPW--PW--PVPAIPAD---AW-----ARLPE--TDDGLEAAARAYYG--------APQLLP--VAGSQAA 76 (330)
T ss_pred HheeecCCcCCC--CC--CCcccCHH---HH-----HhCCC--ChHHHHHHHHHHhC--------CCCEEE--CcCHHHH
Confidence 679999987421 11 11122111 11 23643 33899999999962 368988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
+.++. .+.+||+|++++|+|+.|...++..|++++.+|++ .+++.+. ++++++++|||||||
T Consensus 77 l~~~~----~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~----~~~~v~l~nP~NPTG 138 (330)
T PRK05664 77 IQALP----RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD----SLDVLVVVNPNNPTG 138 (330)
T ss_pred HHHHH----HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc----CCCEEEEeCCcCCCC
Confidence 88872 24699999999999999999999999999999862 3444443 244677799999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+++++|+++|++++++||+||+|.++... .+...+ ...+++++++||||.||+||+|+||+ +++ +
T Consensus 139 ~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~------~s~~~~-~~~~~vi~~~SfSK~~gl~GlRiG~~--v~~-~ 208 (330)
T PRK05664 139 RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ------HSLAAC-AHRPGLIVLRSFGKFFGLAGARLGFV--LAE-P 208 (330)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc------cccccc-ccCCCEEEEeeccccccCCCcceEEE--EeC-H
Confidence 9999999999999999999999999999887521 123333 34578999999999999999999999 776 6
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+ +++.+..... ..+.+.++|.++..+|++
T Consensus 209 ~----l~~~~~~~~~--~~~~~~~~~~~~~~~L~~ 237 (330)
T PRK05664 209 A----LLRALAELLG--PWTVSGPTRWLAQAALAD 237 (330)
T ss_pred H----HHHHHHHhcC--CCCCCHHHHHHHHHHHhC
Confidence 6 5666665543 236778899998888765
No 100
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=1.2e-31 Score=256.09 Aligned_cols=206 Identities=18% Similarity=0.206 Sum_probs=166.9
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDAR 198 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G 198 (363)
..| |.....++++++++++. +++++|++ |+|+++++.++. ...+.+| |.|+++.|+|..|...++..|
T Consensus 52 ~~Y-p~~~~~~l~~~~a~~~g------~~~~~I~~--~~Gs~e~i~~~~--~~~~~~g~~~vli~~P~y~~y~~~~~~~G 120 (351)
T PRK01688 52 NRY-PECQPKAVIENYAAYAG------VKPEQVLV--SRGADEGIELLI--RAFCEPGKDAILYCPPTYGMYSVSAETIG 120 (351)
T ss_pred ccC-CCCChHHHHHHHHHHhC------CCHHHEEE--cCCHHHHHHHHH--HHhcCCCCCEEEEcCCCHHHHHHHHHHcC
Confidence 557 44445799999999852 35899988 999999999984 3446687 899999999999999999999
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCC
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~ 278 (363)
++++.+|++ +++++|++.+++++. +++++++||||||||.+++.+++++|++.|++ +.++|+||+|.+|....
T Consensus 121 ~~~~~v~~~--~~~~~d~~~l~~~~~----~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~ 193 (351)
T PRK01688 121 VEIRTVPTL--DNWQLDLPAIADNLD----GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQA 193 (351)
T ss_pred CEEEEeecC--CCCCCCHHHHHHhcc----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCC
Confidence 999999984 358999999998763 45677889999999999999999999999986 68899999999997431
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+...+....+++++++||||.||++|+|+||+ +++ ++ +++.+++... .++++.+.|.++..+|.+
T Consensus 194 ------s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~--i~~-~~----~i~~l~~~~~--~~~v~~~~~~~a~~~L~~ 258 (351)
T PRK01688 194 ------SLAGWLAEYPHLVILRTLSKAFALAGLRCGFT--LAN-EE----VINLLLKVIA--PYPLSTPVADIAAQALSP 258 (351)
T ss_pred ------ChHHHHhhCCCEEEEecchHhhcCHHHHHhHH--hCC-HH----HHHHHHhccC--CCCCCHHHHHHHHHHHhc
Confidence 23334455689999999999999999999999 665 66 5566665533 346778888888777764
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.98 E-value=5e-31 Score=250.48 Aligned_cols=237 Identities=13% Similarity=0.071 Sum_probs=172.5
Q ss_pred CCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCC
Q 017967 65 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (363)
.++..+..+...+.... .++++|+.+++. .+++ ++.+.. .. . ..|+.. . .+||+++|+++.-.
T Consensus 7 ~hg~~~~~~~~~~~~~~-~~~i~ls~Nenp--~~~~--~~~~~~--~~-~-----~~Yp~~-~-~~L~~~ia~~~~~~-- 69 (339)
T PRK06959 7 AHGGNLHEAARRYGIPY-DAWLDLSTGINP--HGYP--VPPVPA--DA-W-----RRLPED-D-DGLAACAARYYGAP-- 69 (339)
T ss_pred CCCchHHHHHHHcCCCh-hhhceeccCCCC--CCCC--CCCCCH--HH-H-----HhCCCc-h-HHHHHHHHHHhCCC--
Confidence 34445555554444322 268999988752 2222 111111 11 1 347543 3 89999999996332
Q ss_pred CcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
++++|++ |+|+++++.++ ...+.+|| |+++.|+|+.|...++..|++++.+++++ +.+.+
T Consensus 70 ---~~~~I~i--~~Gs~e~i~~l---~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~~~--- 129 (339)
T PRK06959 70 ---DAAHVLP--VAGSQAAIRAL---PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTLPA--- 129 (339)
T ss_pred ---CcccEEE--CcCHHHHHHHH---HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhccc---
Confidence 3589988 99999998866 33456776 89999999999999999999999988632 22211
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 304 (363)
...++++||||||||.+++.+++++|++.|++++.++|+||+|.+|.+. .+...+. ..+++++++||||
T Consensus 130 ----~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~------~s~~~~~-~~~~vi~l~SfSK 198 (339)
T PRK06959 130 ----ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA------ASLAAHT-DRPGLVVLRSVGK 198 (339)
T ss_pred ----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc------ccchhcc-CCCCEEEEecChh
Confidence 2346778999999999999999999999999999999999999998743 1232332 3478999999999
Q ss_pred ccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 305 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 305 ~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.||++|+|+||+ +++ ++ +++++.+... ..+.+.++|.++..+|++
T Consensus 199 ~~gl~GlRiGy~--v~~-~~----li~~l~~~~~--~~~vs~~~q~a~~~~L~~ 243 (339)
T PRK06959 199 FFGLAGVRAGFV--LAA-PA----LLAALRDALG--AWTVSGPARHAVRAAFAD 243 (339)
T ss_pred hcCCcchheEEE--ecC-HH----HHHHHHHhcC--CCCCcHHHHHHHHHHhCc
Confidence 999999999999 776 66 6666666543 345788999999998875
No 102
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.2e-30 Score=250.53 Aligned_cols=239 Identities=17% Similarity=0.186 Sum_probs=186.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++++|+.|++. .+ +++.+.+++.+.... . ..|++.. ..+||+++|+++. +++++|++ |.|+++
T Consensus 32 ~~~i~l~~~~~~--~~---~~~~~~~a~~~~~~~-~-~~y~~~~-~~~lr~~ia~~~~------~~~~~i~~--t~G~~~ 95 (367)
T PRK02731 32 ADIIKLASNENP--LG---PSPKAIEAIRAAADE-L-HRYPDGS-GFELKAALAEKFG------VDPERIIL--GNGSDE 95 (367)
T ss_pred CceEEecCCCCC--CC---CCHHHHHHHHHHHHh-h-cCCCCCc-HHHHHHHHHHHhC------cCHHHEEE--cCCHHH
Confidence 479999999753 12 245566666655432 2 5686554 4799999999972 34689988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++. ..++.+||.|++++|+|..+...++..|++++.++. +++++|++.+++.+++ ++++++++||||||
T Consensus 96 ~l~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~---~~~~v~l~~p~npt 167 (367)
T PRK02731 96 ILELLA--RAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTP---RTRLVFIANPNNPT 167 (367)
T ss_pred HHHHHH--HHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCC---CCcEEEEeCCCCCC
Confidence 988873 344679999999999999999888999999999987 3578999999998863 45677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|++.++ +++++|+||+|.++.+++.. ..++ ...+..+++++++||||.||++|+|+||+ +++
T Consensus 168 G~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~--~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l--~~~- 240 (367)
T PRK02731 168 GTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDY--EDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYG--IAP- 240 (367)
T ss_pred CcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCc--ccHH-HHHhhcCCEEEEeeehHhhcCcccceeee--eCC-
Confidence 99999999999998875 69999999999998875321 2223 33355678999999999999999999999 665
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ ++++++.... ..+.+.++|.++..+|+.
T Consensus 241 ~~----~~~~l~~~~~--~~~~~~~~~~~a~~~l~~ 270 (367)
T PRK02731 241 PE----IIDALNRVRQ--PFNVNSLALAAAVAALDD 270 (367)
T ss_pred HH----HHHHHHHccC--CCCCCHHHHHHHHHHhCC
Confidence 66 5566655543 246788999999888864
No 103
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.5e-30 Score=246.58 Aligned_cols=197 Identities=16% Similarity=0.164 Sum_probs=152.7
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 199 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~ 199 (363)
..| |..-..+||+++|+++.. .+++|++ |+|+++++.++.. .+.+| .|++++|+|+.|...++..|+
T Consensus 35 ~~Y-p~~~~~~lr~~ia~~~~~------~~~~I~i--t~Gs~~~l~~~~~---~~~~~-~vv~~~P~y~~y~~~~~~~G~ 101 (332)
T PRK06425 35 SIY-PEISYTDIEDQIKIYTQG------LKIKVLI--GPGLTHFIYRLLS---YINVG-NIIIVEPNFNEYKGYAFTHGI 101 (332)
T ss_pred ccC-cCcCHHHHHHHHHHHhCC------CcceEEE--CCCHHHHHHHHHH---HhCCC-cEEEeCCChHHHHHHHHHcCC
Confidence 457 555678999999999643 3688988 9999999998843 35676 477779999999999999999
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.+|+++ +++|.+.+++ .+++++++||||||||.+++.+++++|+++|++++++||+||+|.+|.++.
T Consensus 102 ~v~~vp~~~---~~~~~~~l~~------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~- 171 (332)
T PRK06425 102 RISALPFNL---INNNPEILNN------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR- 171 (332)
T ss_pred eEEEEeCCc---ccCcHHHHhh------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-
Confidence 999999842 3556554432 135567778999999999999999999999999999999999999998652
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHH
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGI 351 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~ 351 (363)
..+...+.+..+++++++||||.||+||+|+||+ +++ ++ +++.+.+....+ ..+...+.+
T Consensus 172 ---~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~--v~~-~~----li~~l~~~~~~~--~~~~~~~~~ 231 (332)
T PRK06425 172 ---AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYI--ATD-DY----NMKISRKITEPW--SVCDPAIDF 231 (332)
T ss_pred ---chhHHHHhccCCCEEEEeecHHhcCCchhhheee--ecC-HH----HHHHHHHcCCCC--ccCHHHHHH
Confidence 1233444455579999999999999999999999 776 66 566666543322 334444443
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.97 E-value=2.5e-30 Score=245.01 Aligned_cols=239 Identities=18% Similarity=0.174 Sum_probs=182.5
Q ss_pred CCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCc
Q 017967 67 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 146 (363)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~ 146 (363)
+.++..+.+++.. +.++.++|+.|++. . .++... ... ....+|++..| +++|+++++++.
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~----~~~~~~-~~~-----~~~~~y~~~~~-~~lr~~la~~~~------ 61 (330)
T TIGR01140 2 GGNLRRAAARYGI-PPEDWLDFSTGINP--L----GPPVPP-IPA-----SAWARYPDPEY-DELRAAAAAYYG------ 61 (330)
T ss_pred CccHHHHHHHcCC-ChhheeEccccCCC--C----CCChhh-cch-----HHHhhCCCccH-HHHHHHHHHHhC------
Confidence 4567777777543 34578999999852 1 112111 111 12266866665 999999999963
Q ss_pred ccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC
Q 017967 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (363)
+++++|++ |.|+++++.++. ..+.+| .|++++|+|..+...++..|++++.++ |++.+++.+.
T Consensus 62 ~~~~~i~~--t~G~~~~i~~~~---~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-- 124 (330)
T TIGR01140 62 LPAASVLP--VNGAQEAIYLLP---RLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-- 124 (330)
T ss_pred CChhhEEE--CCCHHHHHHHHH---HHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc--
Confidence 34789988 999999988863 335677 799999999999999999999998886 7888888774
Q ss_pred CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
+ ..++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.. ++..+.+..+++++++||||.|
T Consensus 125 -~-~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~------~~~~~~~~~~~~i~~~S~SK~~ 196 (330)
T TIGR01140 125 -E-LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA------SLAPQAARFPGLVVLRSLTKFF 196 (330)
T ss_pred -c-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc------chhhHhccCCCEEEEEecchhh
Confidence 2 3467779999999999999999999999999999999999999987541 2223334457899999999999
Q ss_pred ccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
|++|+|+||+ +++ ++ +++.+..... ..+++.++|.++..++++.
T Consensus 197 g~~G~R~G~i--~~~-~~----~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~ 240 (330)
T TIGR01140 197 GLAGLRLGFV--VAH-PA----LLARLREALG--PWTVNGPARAAGRAALADT 240 (330)
T ss_pred cCchhhhhhe--eCC-HH----HHHHHHhcCC--CCCchHHHHHHHHHHHhch
Confidence 9999999999 665 66 4555555432 3467889999999888743
No 105
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.5e-30 Score=248.87 Aligned_cols=227 Identities=15% Similarity=0.130 Sum_probs=173.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
+.++|+.+++. .++ ++.+ .. .. ...|++ .+.++||+++|+++. +++++|++ |+|++++
T Consensus 32 ~~~~l~~ne~~--~~~---~~~~-----~~--~~-~~~Yp~-~~~~~Lr~aia~~~~------~~~~~I~i--t~Gs~~~ 89 (354)
T PRK04635 32 GDIWINANESP--FNN---EYKL-----DL--AR-LNRYPE-CQPPELINAYSAYAG------VAPEQILT--SRGADEA 89 (354)
T ss_pred CcEEeeCCCCC--CCC---Chhh-----hh--HH-hccCCC-CCHHHHHHHHHHHhC------cCHHHEEE--eCCHHHH
Confidence 56899988852 111 1222 11 11 256855 468999999999852 45899988 9999999
Q ss_pred HHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 164 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 164 l~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
+.++.. ..+.+| |.|+++.|+|+.|...++..|++++.+|++ +++.+|++.+++ + ++++++++|||||||
T Consensus 90 i~~~~~--~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~----~~~~li~i~nP~NPT 160 (354)
T PRK04635 90 IELLIR--AFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L----DGAKLVFICNPNNPT 160 (354)
T ss_pred HHHHHH--HhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c----cCCCEEEEeCCCCCC
Confidence 999843 346788 899999999999999999999999999984 357889988863 3 245677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|++.|+ +++||+||+|.+|.... +...+....+++++++||||.||++|+|+||+ +++
T Consensus 161 G~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~------s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~--i~~- 229 (354)
T PRK04635 161 GTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEY------SVADLLASYPNLVVLRTLSKAFALAGARCGFT--LAN- 229 (354)
T ss_pred CccCCHHHHHHHHHhCC--CcEEEEeCchHhhccCc------chHHHHhhCCCEEEEechHHHhhhhHHHHhhh--hCC-
Confidence 99999999999998876 49999999999987431 23333455688999999999999999999999 665
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+..... ..+.+.+.|.++..+|.+
T Consensus 230 ~~----~~~~l~~~~~--~~~~~~~~~~~a~~~l~~ 259 (354)
T PRK04635 230 EE----LIEILMRVIA--PYPVPLPVSEIATQALSE 259 (354)
T ss_pred HH----HHHHHHhhcC--CCCCCHHHHHHHHHHHhc
Confidence 66 5555554432 346778888888777754
No 106
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.97 E-value=3e-30 Score=245.95 Aligned_cols=238 Identities=16% Similarity=0.203 Sum_probs=185.3
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+|++|.+. ..+++.+.+++.+.... ...|++..| +++|+++|+++. +++++|++ |.|+++
T Consensus 19 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--~~G~~~ 82 (346)
T TIGR01141 19 KEVIKLNSNENP-----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILL--GNGSDE 82 (346)
T ss_pred CceEEccCCCCC-----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEE--cCCHHH
Confidence 379999999862 22345666666654421 256866666 899999999974 34689988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++ +..++.+||+|++++|+|+.+...++..|++++.+++++ ++.+|++.+++.+. ++++++++++|||||
T Consensus 83 ~l~~~--~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~---~~~~~v~l~~p~Npt 155 (346)
T TIGR01141 83 IIELL--IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDE--DGQLDLEDILVAID---DKPKLVFLCSPNNPT 155 (346)
T ss_pred HHHHH--HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCC--CCCCCHHHHHHhcC---CCCCEEEEeCCCCCC
Confidence 98877 344467999999999999999988999999999999843 36799999998764 346677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++.++++.++ +++++|+||+|.++.... .... +....+++++++||||.||++|+|+||+ +++
T Consensus 156 G~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~~~~---~~~~~~~~i~~~S~sK~~g~~G~r~G~~--~~~- 225 (346)
T TIGR01141 156 GNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---STLP---LLAEYPNLIVLRTLSKAFGLAGLRIGYA--IAN- 225 (346)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---cHHH---HHhhCCCEEEEehhhHhhhchhhhceee--ecC-
Confidence 99999999999999887 799999999999877531 1111 2233468999999999999999999999 664
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++ ++++++.... ..+.+.++|.++..+++..
T Consensus 226 ~~----~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 256 (346)
T TIGR01141 226 AE----IIDALNKVRA--PFNLSRLAQAAAIAALRDD 256 (346)
T ss_pred HH----HHHHHHhccC--CCCCCHHHHHHHHHHhCCH
Confidence 66 5566655433 3467889999988877654
No 107
>PRK07908 hypothetical protein; Provisional
Probab=99.97 E-value=1e-29 Score=242.67 Aligned_cols=232 Identities=17% Similarity=0.131 Sum_probs=173.9
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.....++.++|+.|++. ..+++.+.+++.+.... ..+|++..|..+||+++++++. +++++|++ |
T Consensus 17 ~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~i--t 81 (349)
T PRK07908 17 DQDAGPGLLDFAVNVRH-----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARHG------RTPDEVLL--L 81 (349)
T ss_pred cccCCCCeEEecCCCCC-----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHhC------cChhhEEE--C
Confidence 33444689999998852 23456677776655432 2679888899999999999963 35789988 9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
.|+++++.++.. +.+ +.++++.|+|..+...++..|++++.+++++ ++++|++.++ +++++++++|
T Consensus 82 ~Ga~~al~~~~~----l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l~-------~~~~~i~l~n 147 (349)
T PRK07908 82 AGAAEGFALLAR----LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAVP-------DDADLVVIGN 147 (349)
T ss_pred CCHHHHHHHHHh----cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHhc-------cCCCEEEEcC
Confidence 999999988733 556 4677889999999999999999999999853 3788887542 2355788899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
||||||.+++.+++.++ |+ ++.++|+||+|.++..+. ..++... ..+++++++||||.||++|+|+||+
T Consensus 148 p~NPTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~~----~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~- 216 (349)
T PRK07908 148 PTNPTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVPGE----PESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYA- 216 (349)
T ss_pred CCCCCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhccCC----ccccccc--cCCCEEEEeecccccCCccceeeee-
Confidence 99999999998876665 54 578888999999986432 2232221 2357999999999999999999999
Q ss_pred EeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 318 VVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+++ ++ +++++...... .+.+.+.|.++..+++
T Consensus 217 -~~~-~~----~~~~~~~~~~~--~~~~~~~~~a~~~~~~ 248 (349)
T PRK07908 217 -LGA-PD----VLARLTRGRAH--WPVGTLQLEAIAACCA 248 (349)
T ss_pred -ecC-HH----HHHHHHhcCCC--CCccHHHHHHHHHHhc
Confidence 665 66 55656554332 4667777887777665
No 108
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.3e-29 Score=242.82 Aligned_cols=247 Identities=17% Similarity=0.182 Sum_probs=181.4
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (363)
+....+.+..+. .++|+|+.|++. ..+++.+.+++.+.... . ..|++.. ..++|+++|+++. +++
T Consensus 22 ~~~~~~~~~~~~-~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~-~-~~y~~~~-~~~lr~~ia~~~~------~~~ 86 (361)
T PRK00950 22 KEEIAREYGIDP-ESIIKLGSNENP-----LGPSPKAVEAIEKELSK-I-HRYPEPD-APELREALSKYTG------VPV 86 (361)
T ss_pred HHHHHHHhCCCc-cceEEccCCCCC-----CCCCHHHHHHHHHHHHh-h-cCCCCCC-HHHHHHHHHHHhC------CCH
Confidence 434444444332 278999998752 11345566665554432 2 5676554 4999999999973 236
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
++|++ .+.|+++++.++. ...+.+||.|++++|+|+.+...++..|++++.++. ++++++|++.+++.+.. +
T Consensus 87 ~~i~~-~~~Ga~~~i~~~~--~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~---~ 158 (361)
T PRK00950 87 ENIIV-GGDGMDEVIDTLM--RTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITE---K 158 (361)
T ss_pred HHEEE-eCCCHHHHHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhcc---C
Confidence 77754 1467788887773 334579999999999999999999999999999985 34678999999998863 4
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++||||||.+++.+++.+| |+++|+++|+||+|.+|... ....+.+..+++++++||||.||++
T Consensus 159 ~~~v~~~~p~nptG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~-------~~~~~~~~~~~vi~~~S~SK~~g~~ 228 (361)
T PRK00950 159 TKVIFLCTPNNPTGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY-------DYTPLALEYDNLIIGRTFSKVFGLA 228 (361)
T ss_pred CCEEEEeCCCCCCCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc-------chHHHHHhcCCEEEEEeehHhhcCc
Confidence 5577778999999999999987776 56789999999999988622 1222334557899999999999999
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+|+||+ +++ ++ +++.+++.... .+.+.++|.++..+|++
T Consensus 229 GlRiG~~--~~~-~~----~~~~~~~~~~~--~~~~~~~~~~a~~~l~~ 268 (361)
T PRK00950 229 GLRIGYG--FVP-EW----LIDYYMRAKTP--FSLTRLSQAAAIAALSD 268 (361)
T ss_pred hhhcchh--cCC-HH----HHHHHHHhcCC--CCCCHHHHHHHHHHhcC
Confidence 9999999 765 66 56666655432 35778999988887764
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.94 E-value=3.6e-25 Score=217.30 Aligned_cols=268 Identities=10% Similarity=0.066 Sum_probs=186.7
Q ss_pred CCCCCchhhHHHH---HhcCCCCCcEEeeccccC-CCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHH
Q 017967 64 MAPPDPILGVSEA---FKADTDEKKLNLGVGAYR-TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 139 (363)
Q Consensus 64 ~~~~~~~~~~~~~---~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l 139 (363)
..++..+..+.++ ++... .+.++|++|++. |..++... ..+.++....+..+. .+|++..|.++||+++++++
T Consensus 15 ~v~~~~~~~~~~~~~~l~~~g-~~~~~L~~g~p~~D~~tds~t-~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~ 91 (460)
T PRK13238 15 MVEPIRLTTREERERALAEAG-YNPFLLKSEDVFIDLLTDSGT-GAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIF 91 (460)
T ss_pred eeccccccCHHHHHHHHHHcC-CCEEeCCCCCCCCCCCCCCCc-hhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHh
Confidence 3444444444433 33333 389999999973 33332211 245555444443333 67999999999999999997
Q ss_pred hcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccC------CCC-
Q 017967 140 FGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP------KTV- 212 (363)
Q Consensus 140 ~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~------~~~- 212 (363)
.. +++++ |.||++|+.++ +..++.||| |++++|.|..|...++..|.+++.+++++. +.+
T Consensus 92 ~~--------~~vv~--t~ggt~A~~~~--~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~ 158 (460)
T PRK13238 92 GY--------PYTIP--THQGRAAEQIL--FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFK 158 (460)
T ss_pred CC--------CcEEE--CCCHHHHHHHH--HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEecccccccccccccc
Confidence 43 46766 99999999988 555688999 999999999999999999999999998531 233
Q ss_pred -CCCHHHHHHHHHcCC-CCcEEEEEcCCCCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCC--CCcCCCC---CCchh
Q 017967 213 -GLDFEGMIADIKAAP-GGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQ--GFASGSL---DNDAS 284 (363)
Q Consensus 213 -~~d~~~l~~~l~~~~-~~~~~~~i~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~--~~~~~~~---~~~~~ 284 (363)
.+|++.|++.+++.. ++++++++++|||||| .+++.+++++|.++|++||+++|+|+++. ...+... .....
T Consensus 159 g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~ 238 (460)
T PRK13238 159 GNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDK 238 (460)
T ss_pred CCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCC
Confidence 499999999998532 3578899999999997 99999999999999999999999999652 2222110 00112
Q ss_pred HHHHHHhcCCeEEEEEcCccccccccccce-----EEEEeeCChhHHHHHHHHHHhhh-----ccccCCCchHHHHHHhc
Q 017967 285 SVRLFATRGMELLVAQSYSKNLGLYAERIG-----AMNVVCSSSDLAARVKSQLKRLA-----RPMYSNPPPMLLGIQLS 354 (363)
Q Consensus 285 ~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG-----~i~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~s~~~q~~~~~ 354 (363)
++..+ +..++|++|.+.++|+|+| ++ +++++++ +.+.++... ..++.+.+...|.+++.
T Consensus 239 si~~i------~~~~~s~~D~~~~Sg~K~g~~~~GG~-i~~~d~~----l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~ 307 (460)
T PRK13238 239 SIKEI------AREMFSYADGLTMSAKKDAMVNIGGL-LCFRDED----LFTECRTLCILYEGFPTYGGLAGRDMEALAV 307 (460)
T ss_pred CHHHH------hhhhcccCcEEEEecccCCCCcceeE-EEcChHH----HHHHhhhcccccCCcccccCcHHHHHHHHHh
Confidence 22222 3445788888888888874 33 1444456 445454442 23455667777888887
Q ss_pred cccc
Q 017967 355 SMNG 358 (363)
Q Consensus 355 ~l~~ 358 (363)
.|.+
T Consensus 308 ~l~e 311 (460)
T PRK13238 308 GLYE 311 (460)
T ss_pred hHHH
Confidence 6654
No 110
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.94 E-value=2.7e-25 Score=210.94 Aligned_cols=251 Identities=20% Similarity=0.218 Sum_probs=187.1
Q ss_pred EEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
+||+.|.|. ....+.+..+............|.+..|..++++.+++++....+....++++++ +.|+++++.
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~~ 73 (350)
T cd00609 1 IDLSIGEPD-----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEALS 73 (350)
T ss_pred CCCCCCCCC-----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHHH
Confidence 477888763 1223333333332122223367888999999999999999877665555678877 999999988
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH--HHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 166 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF--EGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 166 l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~--~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
.+ +.....+||+|+++.|+|..+...++..|.+++.++.++. ...+. +.+++... +++.++++++++||||
T Consensus 74 ~~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LL--LRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE--GGFLLDLELLEAAKT---PKTKLLYLNNPNNPTG 146 (350)
T ss_pred HH--HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccc--cCCccCHHHHHhhcC---ccceEEEEECCCCCCC
Confidence 87 4444568999999999999999999999999999998533 33433 45554433 3466777788999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+++++|+++|+++|+++|+|++|.++.+..... ......+....+++++|++|.++++|.|+||+ +++++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i--~~~~~ 221 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP---PALALLDAYERVIVLRSFSKTFGLPGLRIGYL--IAPPE 221 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc---ccccCcCccCcEEEEeecccccCCcccceEEE--ecCHH
Confidence 99999999999999999999999999999887653211 11111234467899999999999899999999 77643
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+ +.+.+.........+++..+|.++..+|+..
T Consensus 222 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 253 (350)
T cd00609 222 E----LLERLKKLLPYTTSGPSTLSQAAAAAALDDG 253 (350)
T ss_pred H----HHHHHHHHHHhcccCCChHHHHHHHHHHhCc
Confidence 6 5555665555556788999999888877654
No 111
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=5.3e-24 Score=194.37 Aligned_cols=247 Identities=20% Similarity=0.162 Sum_probs=194.8
Q ss_pred ccHHHHHHHHHHHc-cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEE
Q 017967 102 VLDVVKKAENLMLE-RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV 180 (363)
Q Consensus 102 ~~~~v~~a~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~V 180 (363)
+.+++..+.+-+-+ .+....|...+|++-.|+.+|+|+.+++|.+.+|++|++ |.|++.|+..+..++. ..+.+.|
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~~-~~~~~Gv 164 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLLI-AGKKTGV 164 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHHh-cCCCCce
Confidence 34455555443322 334577999999999999999999999999899999988 9999999998854431 2377999
Q ss_pred EEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC--CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Q 017967 181 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP--GGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (363)
Q Consensus 181 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~--~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~ 258 (363)
+||-|.|+-|...+..+|...++|-++++.+|.+|.++|++.+.++. -++.++++-||.||||.+++++-+++|+.+|
T Consensus 165 liPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa 244 (475)
T KOG0258|consen 165 LIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFA 244 (475)
T ss_pred EeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHH
Confidence 99999999999999999999999999888999999999999887743 2456777789999999999999999999999
Q ss_pred HhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hc------CCeEEEEEcCcccc-ccccccceEEEEeeCChhHHHHHH
Q 017967 259 QEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TR------GMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 259 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~------~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~~~~~ 330 (363)
.+++++++.||+|++-.|.+. ..++++...+ +. ...++.++|.||.+ |=.|.|-||+-++.-+++ +.
T Consensus 245 ~~~~l~llaDEVYQ~Nvy~~~-skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~pr----v~ 319 (475)
T KOG0258|consen 245 AEEGLVLLADEVYQDNVYTTG-SKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPR----VK 319 (475)
T ss_pred HHcCeEEechHHHHhhccCCC-cchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChh----HH
Confidence 999999999999999998742 3466665543 11 12466678999987 558999999977776776 55
Q ss_pred HHHHhhhccccCCCchHHHHHHhcccc
Q 017967 331 SQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 331 ~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+++.++. ..-.+++..+|..+-...+
T Consensus 320 ~qi~Kl~-si~lc~~V~GQ~~vdl~Vn 345 (475)
T KOG0258|consen 320 QQIKKLA-SIKLCPQVSGQKLVDLVVN 345 (475)
T ss_pred HHHHHHH-hhhhcCCccchhhhceecC
Confidence 5555443 2334777778877655443
No 112
>PRK07049 methionine gamma-lyase; Validated
Probab=99.91 E-value=1.6e-22 Score=197.30 Aligned_cols=199 Identities=20% Similarity=0.170 Sum_probs=153.3
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (363)
+......|++++|++. + .+++++ +.||++|+.++ +..++.+||.|+++.|+|+.+...+ +..|+
T Consensus 81 ~~Pt~~~Le~~lA~le-g-------~~~~iv--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 81 NHPNSEIVEDRLAVYE-G-------AESAAL--FSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred CCcCHHHHHHHHHHHh-C-------CCcEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 4556789999999995 3 245666 89999997777 5667889999999999999997764 46798
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcC--CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh---cCCeEEEecCCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE---KNHIPFFDVAYQGF 274 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~---~~~~ii~De~y~~~ 274 (363)
+++.++. +.|++.+++.+.+. .++++++++++||||||.+++.+++.+|++.|+. +++++|+||+|..+
T Consensus 149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 8777762 35778888777531 1356788889999999999999999999988754 68999999998765
Q ss_pred cCCCCCCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHh
Q 017967 275 ASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQL 353 (363)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~ 353 (363)
.... +. .. ...++++||||.+| .+|+|+||+ +++ ++ +++.+.........+.+++.|.++.
T Consensus 223 ~~~~------pl----~~-g~divv~S~SK~~gG~~glr~G~v--v~~-~~----l~~~l~~~~~~~g~~ls~~~a~l~~ 284 (427)
T PRK07049 223 VFQK------PL----EH-GADLSVYSLTKYVGGHSDLVAGAV--LGR-KA----LIRQVRALRSAIGTQLDPHSCWMLG 284 (427)
T ss_pred ccCC------cc----cc-CCCEEEEcCceeecCCCCcEEEEE--ECC-HH----HHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 4321 11 11 34688889999999 699999999 654 66 5555665555566789999999998
Q ss_pred ccccc
Q 017967 354 SSMNG 358 (363)
Q Consensus 354 ~~l~~ 358 (363)
+.|+.
T Consensus 285 r~L~t 289 (427)
T PRK07049 285 RSLET 289 (427)
T ss_pred cCCCh
Confidence 88764
No 113
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.5e-22 Score=179.21 Aligned_cols=264 Identities=17% Similarity=0.142 Sum_probs=187.1
Q ss_pred hhhHHHHH-hcCCCCCcEEeeccccCCCCCCccccHHHHHHHH----HHHcc----CCCCCCCCCcchHHHHHHHHHHHh
Q 017967 70 ILGVSEAF-KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN----LMLER----GENKEYLPIEGLAAFNKVTAELLF 140 (363)
Q Consensus 70 ~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~----~~~~~----~~~~~Y~~~~G~~~lr~aia~~l~ 140 (363)
|.+++... +.-..++.|.|+.|.|. ..|.+.+..+ +++.. ....+|..++|...|.++++..+.
T Consensus 16 i~~lMdDl~d~Lrt~g~imLggGNPa-------~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~ 88 (417)
T COG3977 16 ITQLMDDLNDGLRTPGAIMLGGGNPA-------RIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLR 88 (417)
T ss_pred HHHHHHHHHhhccCCCceeeCCCCcc-------cChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 34444433 23344689999988752 2344444443 33322 234789999999999999999999
Q ss_pred cCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC-CCC--EE-EEcCCCCcchHHHHhhCCCCeEEEe---cccCC--C
Q 017967 141 GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGA--KV-LISSPTWGNHKNIFNDARVPWSEYR---YYDPK--T 211 (363)
Q Consensus 141 ~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~-~gd--~V-lv~~P~y~~~~~~~~~~G~~~~~v~---~~~~~--~ 211 (363)
+.+|+.++++||.+ |+|++.+...++.++.-.. .|+ +| +-..|.|.+|..+...-..=|..-| ..+.. .
T Consensus 89 ~~ygwnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FK 166 (417)
T COG3977 89 REYGWNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFK 166 (417)
T ss_pred HHhCCCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCccccccccee
Confidence 99999999999988 9999999888865544332 343 34 4456899888765432111111111 11111 2
Q ss_pred CCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh
Q 017967 212 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (363)
Q Consensus 212 ~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (363)
+.+|++.+.- . +.+..++++.|.||||.+++.+|+.+|..++++||+.+|+|.+|..-..+-. +..+. .-
T Consensus 167 Y~vDF~~l~i--~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~ii---fsd~~--~~ 236 (417)
T COG3977 167 YHVDFEHLHI--G---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGII---FSDAT--PL 236 (417)
T ss_pred eccCHHHccc--c---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCcee---ccccc--cc
Confidence 5678888753 2 3566888899999999999999999999999999999999999964321100 00111 12
Q ss_pred cCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
-.++++.+.|+|| +|+||.|.|.+ ++ +++ +++.+..........+..+++.+++.+++..+
T Consensus 237 w~~NiilC~SLSK-~GLPG~R~GIi--Ia-ne~----viqaitnmn~iisLap~~~G~Aia~~mie~gd 297 (417)
T COG3977 237 WNENIILCMSLSK-LGLPGSRCGII--IA-NEK----VIQAITNMNGIISLAPGRMGPAIAAEMIESGD 297 (417)
T ss_pred CCCCEEEEeehhh-cCCCCcceeEE--Ec-cHH----HHHHHHhccceeeecCCCccHHHHHHHhhcch
Confidence 4589999999999 78999999999 65 577 78888888777778999999999999887654
No 114
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.6e-23 Score=182.14 Aligned_cols=189 Identities=19% Similarity=0.173 Sum_probs=154.6
Q ss_pred CcccCCcEEEEeccchhHHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
.+.++++|++ ..|+.+.+.++ +.+.+.|| ++|+...|+|+.|.-.+.-++++++.+|. ..+|.++.|.+.+.+
T Consensus 82 kpLt~dnic~--GvGsDE~ID~i--iR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl--~pdF~lnvdai~evl 155 (375)
T KOG0633|consen 82 KPLTSDNICV--GVGSDELIDLI--IRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPL--NPDFSLNVDAIAEVL 155 (375)
T ss_pred CCCCccceEE--ecCcHHHHHHH--HhheecCCccceeecCCcceeEEEEeecCCceEEEecC--CCCccccHHHHHHHH
Confidence 4577899988 99999999888 44446699 89999999999998888889999999998 458999999999999
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
+... ..+++++++|+||||..+..+++++|++.-. |.++++||+|-+|.... +-..+....++++++++||
T Consensus 156 ~~ds-~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~------S~~~lV~kYpNLivlqTlS 226 (375)
T KOG0633|consen 156 ELDS-KIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVE------SRMKLVKKYPNLIVLQTLS 226 (375)
T ss_pred hccc-cceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecccc------ccchHhHhCCceeehhhhh
Confidence 8643 4678888999999999999999999976433 78999999999998632 2333457789999999999
Q ss_pred cccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 304 K~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|.||++|+|+||- ..+ .. +.+-+..++. -++.|..+..++..+|.
T Consensus 227 KsfGLAGiRvG~~--~~~-~~----ia~iln~~Ka--PYNiS~~~s~~AL~Als 271 (375)
T KOG0633|consen 227 KSFGLAGIRVGYG--AFP-LS----IAEILNRAKA--PYNISVAGSVAALAALS 271 (375)
T ss_pred hhcCcceeEeecc--ccc-HH----HHHHHHhccC--CccccchhHHHHHHhcC
Confidence 9999999999999 555 44 5555665544 34778778777777665
No 115
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.89 E-value=2.1e-21 Score=188.38 Aligned_cols=222 Identities=10% Similarity=0.064 Sum_probs=160.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
+.+.|..+++.-.-..+---..+.++....+..+. ..|++..|.++|++++++++.. +++++ |.||++|
T Consensus 12 n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g~--------~~vv~--t~~Gt~A 80 (431)
T cd00617 12 NVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFGF--------KHIIP--THQGRGA 80 (431)
T ss_pred CEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHCC--------CeEEE--cCCHHHH
Confidence 78888888762111111111234333333332333 5699999999999999999733 46777 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCC--------CCCCCHHHHHHHHHcC-CCCcEEEE
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAA-PGGSFILL 234 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~--------~~~~d~~~l~~~l~~~-~~~~~~~~ 234 (363)
+.++ +..++.|||.| +++|+|..+...+...|.+++.++++... .+.+|++.+++.+++. .+++++++
T Consensus 81 l~la--~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~ 157 (431)
T cd00617 81 ENIL--FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIV 157 (431)
T ss_pred HHHH--HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEE
Confidence 9988 45567899987 69999999999999999999999986432 3559999999999853 22366788
Q ss_pred EcCCCCCC-CCCCCHHHHHHHHHHHHhcCCeEEEecCCCC--CcC-----CCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 235 HGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG--FAS-----GSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 235 i~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~--~~~-----~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
+++||||+ |..++.+++++|.++|+++|+++|+|++..- ..+ ++ ....++.. .++.++|+||.+
T Consensus 158 v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g--~~~~si~e------i~~e~~s~sd~~ 229 (431)
T cd00617 158 LTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEG--YRDKSIAE------IAREMFSYADGC 229 (431)
T ss_pred EECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhccccc--ccCCCHHH------HHHHhhccCCEE
Confidence 89999998 9999999999999999999999999999321 111 11 01112222 245578899999
Q ss_pred cccccc------ceEEEEeeCChhHHHHH
Q 017967 307 GLYAER------IGAMNVVCSSSDLAARV 329 (363)
Q Consensus 307 ~l~G~R------vG~i~~v~~~~~~~~~~ 329 (363)
.+.|+| .||+ ++++++.++++
T Consensus 230 ~mS~~K~~~~~~GG~i--~~~d~~l~~~~ 256 (431)
T cd00617 230 TMSAKKDGLVNIGGFL--ALRDDELYEEA 256 (431)
T ss_pred EEEeecCCCCccceEE--EeCcHHHHHHH
Confidence 999998 5588 77766644443
No 116
>PLN02242 methionine gamma-lyase
Probab=99.86 E-value=2e-20 Score=181.92 Aligned_cols=189 Identities=17% Similarity=0.146 Sum_probs=138.8
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-----hCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-----DAR 198 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~G 198 (363)
+.....+|++.+|++... +.+++ ++||++|+.++ +..++.+||.|+++.|.|+.+...+. ..|
T Consensus 74 ~~Pt~~~LE~~lA~l~g~--------~~~l~--~~sG~~Ai~~a--l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGT--------EAAYC--TASGMSAISSV--LLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN 141 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence 456678999999998533 35555 89999998887 55667899999999999998877653 467
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCC
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~ 278 (363)
++++.++. .|++.+++++++ ++++++++++|+||||.+. ++++|+++|+++|+++|+|++|..+.+..
T Consensus 142 ~~~~~~d~-------~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~ 209 (418)
T PLN02242 142 ITTTFVDI-------TDLEAVKKAVVP--GKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP 209 (418)
T ss_pred ceEEEcCC-------CCHHHHHHhcCc--CCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH
Confidence 77766654 378999998863 2367888899999999987 56778888999999999999998776531
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhc--cccCCCchHHHHHHhcc
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLAR--PMYSNPPPMLLGIQLSS 355 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~--~~~~~~s~~~q~~~~~~ 355 (363)
. .. ...++++||||.++.+|+|+ ||+ +++ ++ +++.+..... ....+++...|.+...+
T Consensus 210 --------~---~~-g~divv~S~SK~l~g~g~~~gG~i--v~~-~~----li~~l~~~~~~~~~~~g~~~~~~~A~l~~ 270 (418)
T PLN02242 210 --------A---RL-GADVVVHSISKFISGGADIIAGAV--CGP-AE----LVNSMMDLHHGALMLLGPTMNPKVAFELS 270 (418)
T ss_pred --------H---Hc-CCcEEEEeCccccCCCCCceEEEE--EcC-HH----HHHHHHHHhhhhhhccCCCCCHHHHHHHH
Confidence 1 11 35688999999999899885 888 554 66 3444444432 23345555555555443
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.86 E-value=6.1e-20 Score=177.97 Aligned_cols=210 Identities=11% Similarity=0.062 Sum_probs=145.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCc---ch----HHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GL----AAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---G~----~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
.++|||+.|.|.+... .+.+.++..+...... .+|++.. |. .++++++|+++.. +++++
T Consensus 38 ~~~i~~~~~~~lg~~~----~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g~--------~~~ii- 103 (393)
T TIGR01822 38 REVLNFCANNYLGLSS----HPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLGT--------EDTIL- 103 (393)
T ss_pred ceEEEeeCCCccccCC----CHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhCC--------CcEEE-
Confidence 3789999998753332 3445555544443211 3455544 64 8899999999743 35655
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEE
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFI 232 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~ 232 (363)
+.||++|+..+ +..++.+||.|++++|.|+.+...++..+.+.+.++ ..|++.+++.+++. ..++++
T Consensus 104 -~~~~~~a~~~~--~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~ 173 (393)
T TIGR01822 104 -YASCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRL 173 (393)
T ss_pred -ECchHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceE
Confidence 68899998877 445578999999999999999988887777664432 47899999988752 115677
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccc
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAE 311 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~ 311 (363)
+++.+++||||.+.+ +++|+++|+++|+++|+||+|..-..+ . ...+.....+. .+..++++||||.++ |+
T Consensus 174 v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~--~~~~~~~~~~~~~~~di~~~s~sK~l~--g~ 245 (393)
T TIGR01822 174 IATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-P--TGRGSHELCGVMGRVDIITGTLGKALG--GA 245 (393)
T ss_pred EEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-C--CCCchHHhcCCCCCCeEEEEEChHHhh--CC
Confidence 888889999999876 667778899999999999998422211 1 11111112221 235688999999875 78
Q ss_pred cceEEEEeeCChhHHH
Q 017967 312 RIGAMNVVCSSSDLAA 327 (363)
Q Consensus 312 RvG~i~~v~~~~~~~~ 327 (363)
|+||+ +++ ++.++
T Consensus 246 r~G~~--~~~-~~~~~ 258 (393)
T TIGR01822 246 SGGFT--TAR-KEVVE 258 (393)
T ss_pred CcEEE--EeC-HHHHH
Confidence 99999 665 66333
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.86 E-value=6.6e-20 Score=175.20 Aligned_cols=234 Identities=14% Similarity=0.020 Sum_probs=153.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CC-CCCC----CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.+|||+.|.|. +. ..++.+.+++.+.+.. .. ...| +......++++++++++.. +++|++ +
T Consensus 17 ~~id~~~~~~~---g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~--~ 83 (360)
T TIGR00858 17 RLLNFSSNDYL---GL-ASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-------EAALLF--S 83 (360)
T ss_pred eEEecccCCcc---cC-CCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CCEEEE--C
Confidence 78999998642 21 1235566666555432 11 0112 1223456788999998632 456666 6
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEc
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHG 236 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~ 236 (363)
.| ++++..+ +...+.+||.|+++.|+|..+...++..|++++.++. +|++.+++.++... .++++++++
T Consensus 84 ~G-~~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~ 153 (360)
T TIGR00858 84 SG-YLANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTD 153 (360)
T ss_pred ch-HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEe
Confidence 65 4554443 3344679999999999999999999999999888763 58899999887532 246788889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH--hcCCeEEEEEcCccccccccccce
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
+++||||...+ +++|.++|+++|+++|+||+|..+.++.. ..+..... ...+++++++||||.||++| |
T Consensus 154 ~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G 224 (360)
T TIGR00858 154 GVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGED---GRGTLEHFGLKPEPVDIQVGTLSKALGSYG---A 224 (360)
T ss_pred CCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCC---CCchHHhcCCCccCCcEEEEechhhhhccC---c
Confidence 99999998766 56677789999999999999986655421 11111121 23467999999999999766 9
Q ss_pred EEEEeeCChhHHHHHHHHHHhhhccc--cCCCchHHHHHHhccc
Q 017967 315 AMNVVCSSSDLAARVKSQLKRLARPM--YSNPPPMLLGIQLSSM 356 (363)
Q Consensus 315 ~i~~v~~~~~~~~~~~~~l~~~~~~~--~~~~s~~~q~~~~~~l 356 (363)
|+ +++ ++ +++.+....... ..+++...+.++...+
T Consensus 225 ~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 261 (360)
T TIGR00858 225 YV--AGS-QA----LIDYLINRARTLIFSTALPPAVAAAALAAL 261 (360)
T ss_pred EE--EcC-HH----HHHHHHHhCccceecCCCCHHHHHHHHHHH
Confidence 98 654 55 455554333322 1234444444443444
No 119
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.86 E-value=7.8e-20 Score=177.30 Aligned_cols=193 Identities=18% Similarity=0.130 Sum_probs=141.9
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 199 (363)
+..+..+|++++|+++.. +++++ ++||++|+.++ +...+.+||+|+++.|.|..+... ++..|+
T Consensus 62 ~~p~~~~Le~~iA~~~g~--------~~~l~--~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 62 GNPTSTEVENKLALLEGG--------EAAVV--AASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 778899999999999642 34555 79999998776 556678999999999998776544 467899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc--CCeEEEecCCCCCcCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASG 277 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~De~y~~~~~~ 277 (363)
+++.++. .|++++++++++ +++++++++|+||||.+.+ +++|.++|+++ ++++|+|++|......
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~~---~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 130 EVTFVDT-------SNLEEVRNALKA---NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EEEEECC-------CCHHHHHHHhcc---CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 9888875 278999998873 4678888999999999887 55666778886 9999999999876543
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
. +. .. ...+++.|+||.++.+|+|+ ||+ +++ ++.++++.... .........+++...++...|
T Consensus 197 ~------~l----~~-g~Divv~S~sK~l~g~g~~~gG~v--~~~-~~~~~~l~~~~--~~~~~g~~l~p~~a~l~~~~l 260 (400)
T PRK06234 197 R------PL----QL-GADVVVHSATKYLNGHGDVIAGFV--VGK-EEFINQVKLFG--IKDMTGSVIGPFEAFLIIRGM 260 (400)
T ss_pred C------ch----hh-CCcEEEeeccccccCCCCceeEEE--Eec-HHHHHHHHHHH--HHHhcCCCCCHHHHHHHHhcc
Confidence 1 11 11 34588999999999899886 888 655 56444433211 111223466777777776665
Q ss_pred c
Q 017967 357 N 357 (363)
Q Consensus 357 ~ 357 (363)
+
T Consensus 261 ~ 261 (400)
T PRK06234 261 K 261 (400)
T ss_pred C
Confidence 5
No 120
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.85 E-value=3.3e-20 Score=176.01 Aligned_cols=225 Identities=17% Similarity=0.099 Sum_probs=155.8
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEE
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vl 181 (363)
+++.+.+++.+.... . ..|++..+..++++.+++++. ++++++ +.||++++.++ +..++.+||.|+
T Consensus 10 ~~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~~a~~~g--------~~~~~~--~~~gt~a~~~~--~~~l~~~gd~v~ 75 (338)
T cd06502 10 PTPEMLEAMAAANVG-D-DVYGEDPTTAKLEARAAELFG--------KEAALF--VPSGTAANQLA--LAAHTQPGGSVI 75 (338)
T ss_pred CCHHHHHHHHhcccC-C-cccCCCHHHHHHHHHHHHHhC--------CCeEEE--ecCchHHHHHH--HHHhcCCCCeEE
Confidence 567787777664322 2 367777788999999999864 245656 78889998777 444467999999
Q ss_pred EcCCCCcchHH---HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC----CCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 182 ISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 182 v~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
++.|+|..+.. .....|++++.++.. ++.+|++.+++++++.. .+++++++++|||| |.+++.+++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i 151 (338)
T cd06502 76 CHETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI 151 (338)
T ss_pred EecCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence 99999875432 344589999999872 36799999999987421 24678888999998 667799999999
Q ss_pred HHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHH
Q 017967 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~ 334 (363)
+++|+++|+++|+||+|..+....... ++... ....+ +++.|+||.||++| |++ +..+++ ++++++
T Consensus 152 ~~~~~~~~~~livDea~~~~~~~~~~~---~~~~~-~~~~d-~~~~s~sK~~~~~~---g~~--~~~~~~----~~~~~~ 217 (338)
T cd06502 152 SALAKENGLPLHLDGARLANAAAALGV---ALKTY-KSGVD-SVSFCLSKGGGAPV---GAV--VVGNRD----FIARAR 217 (338)
T ss_pred HHHHHHcCCeEeechHHHHHHHHhcCC---CHHHH-HhcCC-EEEEeccccCCCcc---ceE--EECCHH----HHHHHH
Confidence 999999999999999985442111001 12222 12234 45779999999887 654 445577 444444
Q ss_pred hhhcc--ccCCCchHHHHHHhccccc
Q 017967 335 RLARP--MYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 335 ~~~~~--~~~~~s~~~q~~~~~~l~~ 358 (363)
..... .....+.+.|.++...|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~a~~~~L~~ 243 (338)
T cd06502 218 RRRKQAGGGMRQSGFLAAAGLAALEN 243 (338)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHhcC
Confidence 33221 1224566777777776654
No 121
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.85 E-value=9.2e-20 Score=176.18 Aligned_cols=242 Identities=15% Similarity=0.173 Sum_probs=162.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
.+++||+.|.+.+.. ..+.+.++..+.... . ....|....|..++++++++++....+. ++.+++ +.|
T Consensus 33 ~~~id~~~~~~~g~~----~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~sG- 102 (385)
T TIGR01825 33 KEVINLSSNNYLGFA----DHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QSG- 102 (385)
T ss_pred ceEEEeeccCccCCC----CCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--CcH-
Confidence 478999988653221 244555555554432 1 1245777889999999999998766553 345655 655
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAH 239 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~ 239 (363)
++++.++ +...+.+||.|+++.|+|..+...+...|++++.++ .+|++.+++.+++.. ++++++++++++
T Consensus 103 ~~a~~~a--~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~ 173 (385)
T TIGR01825 103 FNTNQGV--LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVF 173 (385)
T ss_pred HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCC
Confidence 5665555 344577999999999999999888888888876653 478889988887532 356788888899
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEe
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||||...+ +++|.++|+++|+++|+||+|..+.++.... .....+--..+.++++.||||.+|++| ||+ +
T Consensus 174 ~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~--~ 243 (385)
T TIGR01825 174 SMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGR--GTVHHFGLEDKVDIQVGTLSKAIGVVG---GYA--A 243 (385)
T ss_pred cCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCC--ccHhhcCCCcCCcEEEEeccHHhhcCC---CEE--e
Confidence 99999877 5667888999999999999998765542101 111111112467899999999998665 998 5
Q ss_pred eCChhHHHHHHHHHHhhhc-cccC-CCchHHHHHHhccccc
Q 017967 320 CSSSDLAARVKSQLKRLAR-PMYS-NPPPMLLGIQLSSMNG 358 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~-~~~~-~~s~~~q~~~~~~l~~ 358 (363)
++ ++ +++.+..... .... ..++..|.++...|+.
T Consensus 244 ~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 279 (385)
T TIGR01825 244 GH-KE----LIEYLKNRARPFLFSTAQPPAVVAALAAAVDE 279 (385)
T ss_pred cC-HH----HHHHHHHhCccccccCCCCHHHHHHHHHHHHH
Confidence 54 66 4454544322 2222 2345666666555543
No 122
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.85 E-value=8.9e-20 Score=176.82 Aligned_cols=218 Identities=12% Similarity=0.036 Sum_probs=148.1
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC---CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY---LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y---~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
.++|||+.|.|.+.. ..+.+.++..+.+.... ..| ....|..++++++++++...++. +++|++ |.|
T Consensus 42 ~~~i~l~~~~~~~~~----~~~~i~~a~~~~~~~~~-~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--tsG 111 (397)
T PRK06939 42 KEVINFCANNYLGLA----NHPELIAAAKAALDSHG-FGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--SSC 111 (397)
T ss_pred CeEEEeeccCccccC----CCHHHHHHHHHHHHHcC-CCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--cCh
Confidence 478999998753322 24556666555553311 223 22468888888888777665553 356766 666
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEEEc
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHG 236 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~i~ 236 (363)
++++..+ +..++.|||.|++++|+|+.+...++..|.+++.++. .|++.+++.+++ ...++++++..
T Consensus 112 -~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~ 181 (397)
T PRK06939 112 -FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATD 181 (397)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEe
Confidence 6776666 4455789999999999999999999999998877754 478888888864 11246677767
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccceE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
+.+||||.. +++++|.++|+++++++|+||+|.....+.. . ..... .... ...+++++||||.++ |+|+||
T Consensus 182 ~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~-~-~~~~~-~~~~~~~~~i~~~S~sK~~~--g~r~G~ 253 (397)
T PRK06939 182 GVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGEN-G-RGTVE-HFGVMDRVDIITGTLGKALG--GASGGY 253 (397)
T ss_pred cCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCC-C-CCHHH-HcCCCCCCcEEEEECHHHhC--ccCceE
Confidence 789999974 4678888999999999999999952211110 0 11111 1121 234699999999995 669999
Q ss_pred EEEeeCChhHHHHHHHHHHh
Q 017967 316 MNVVCSSSDLAARVKSQLKR 335 (363)
Q Consensus 316 i~~v~~~~~~~~~~~~~l~~ 335 (363)
+ +++ ++ +++.+..
T Consensus 254 v--~~~-~~----~~~~l~~ 266 (397)
T PRK06939 254 T--AGR-KE----VIDWLRQ 266 (397)
T ss_pred E--EeC-HH----HHHHHHH
Confidence 9 766 66 4455544
No 123
>PRK10534 L-threonine aldolase; Provisional
Probab=99.85 E-value=2e-20 Score=177.45 Aligned_cols=233 Identities=15% Similarity=0.076 Sum_probs=150.4
Q ss_pred EEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
|+|+..+ .|.+++.+.+++.+... .. ..|+|..+..+|++++++++.. +.+++ +.||+++..
T Consensus 2 ~~~~~~~------~~~p~~~~~~a~~~~~~-~~-~~Y~~~~~~~~L~~~la~~~g~--------~~~~v--~~~g~~a~~ 63 (333)
T PRK10534 2 IDLRSDT------VTRPSRAMLEAMMAAPV-GD-DVYGDDPTVNALQDYAAELSGK--------EAALF--LPTGTQANL 63 (333)
T ss_pred ccccccc------CCCCCHHHHHHHHhccC-CC-cccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCchHHHHH
Confidence 5666443 24467888888766432 23 5688888999999999999532 23345 788888866
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcc-hHHH-HhhCC-CCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcEEEEEcCCC
Q 017967 166 LAAALIERYFPGAKVLISSPTWGN-HKNI-FNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAH 239 (363)
Q Consensus 166 l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~-~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~i~~p~ 239 (363)
+. ++..+.+||+|+++.|+|.. |... ....| ++++.++.+ .++.+|++++++++.+++ .+++++++|||+
T Consensus 64 ~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~ 139 (333)
T PRK10534 64 VA--LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH 139 (333)
T ss_pred HH--HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC
Confidence 66 44557799999999888753 3221 23333 677777763 468899999999886311 135677778755
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceE-EEE
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA-MNV 318 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~-i~~ 318 (363)
||.+++.+++++|+++|+++++++++||+|.......... ....+....+.++ .||||.||++ +|| +
T Consensus 140 --~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~---~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~-- 207 (333)
T PRK10534 140 --NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGC---ELKEITQYCDSFT--ICLSKGLGTP---VGSLL-- 207 (333)
T ss_pred --CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCC---CHHHHHhcCCEEE--EEeEcCCCCc---ccceE--
Confidence 6999999999999999999999999999976221100001 1122222223333 4899988754 784 6
Q ss_pred eeCChhHHHHHHHHHHhhhccccCC--CchHHHHHHhcccc
Q 017967 319 VCSSSDLAARVKSQLKRLARPMYSN--PPPMLLGIQLSSMN 357 (363)
Q Consensus 319 v~~~~~~~~~~~~~l~~~~~~~~~~--~s~~~q~~~~~~l~ 357 (363)
++ +++ +++.+++....+..+ .+.+.|.+....|+
T Consensus 208 ~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 243 (333)
T PRK10534 208 VG-NRD----YIKRARRWRKMTGGGMRQAGILAAAGLYALK 243 (333)
T ss_pred Ec-CHH----HHHHHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 44 577 455555554433222 23455665554443
No 124
>PLN02721 threonine aldolase
Probab=99.85 E-value=9.1e-20 Score=174.00 Aligned_cols=210 Identities=15% Similarity=0.087 Sum_probs=139.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+++|+.+.+ +.+.+.+.+++...........| .....+|++++++++.. +.+++ +.+|+++
T Consensus 6 ~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~--------~~~~~--~~~Gs~a 67 (353)
T PLN02721 6 RVVDLRSDTV------TKPTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFGK--------EAALF--VPSGTMG 67 (353)
T ss_pred hhhhhhcccc------cCCCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhCC--------ceeEE--ecCccHH
Confidence 5788887775 23567777777653111122333 33378999999999743 23444 5666766
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCCCCcchHH---HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC----CCCcEEEEE
Q 017967 164 LRLAAALIERYF-PGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLH 235 (363)
Q Consensus 164 l~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~~~~i 235 (363)
..++ +...+. +||.|++++|+|..... .+...|++++.++.+ +++.+|++.+++.+++. .++++++++
T Consensus 68 ~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 68 NLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred HHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 5444 344466 99999999999854433 567889999999873 45679999999999742 023556666
Q ss_pred cC-CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccce
Q 017967 236 GC-AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 236 ~~-p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
++ +|||||.+++.+++++|+++|+++|+++|+|++|........ + .....+....+ +++.|+||.++. ++|
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~--~-~~~~~~~~~~d--~~~~s~sK~l~~---~~G 215 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVAL--G-VPVHRLVKAAD--SVSVCLSKGLGA---PVG 215 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhh--C-CCHHHHhhhCC--EEEEecccccCC---cee
Confidence 55 689999999999999999999999999999999752211000 0 11112222223 335579998863 478
Q ss_pred EEEEeeCChhH
Q 017967 315 AMNVVCSSSDL 325 (363)
Q Consensus 315 ~i~~v~~~~~~ 325 (363)
|+ +..+++.
T Consensus 216 ~~--~~~~~~~ 224 (353)
T PLN02721 216 SV--IVGSKSF 224 (353)
T ss_pred eE--EecCHHH
Confidence 75 3455773
No 125
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.84 E-value=3e-19 Score=172.00 Aligned_cols=192 Identities=15% Similarity=0.096 Sum_probs=141.3
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 199 (363)
+.....+|++++|++.. .+++++ ++||++|+.++ +..++.+||+|+++.|+|......+. ..|+
T Consensus 49 ~~p~~~~le~~lA~l~g--------~~~v~~--~~gg~~Ai~~~--l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~ 116 (382)
T TIGR02080 49 GNPTRDLLQQALAELEG--------GAGAVV--TNTGMSAIHLV--TTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCF 116 (382)
T ss_pred CCchHHHHHHHHHHHhC--------CCcEEE--EcCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCe
Confidence 55567899999999853 256767 99999999988 45557899999999999987655443 2344
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
++..++ ..|++.+++++++ +++++++++|+||||.+++. ++|.++|+++|+++|+|++|..+....
T Consensus 117 ~v~~~d-------~~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~dl---~~I~~la~~~g~~vvvD~a~~~~~~~~- 182 (382)
T TIGR02080 117 RVLFVD-------QGDEQALRAALAQ---KPKLVLIETPSNPLLRVVDI---AKICHLAKAVGAVVVVDNTFLSPALQN- 182 (382)
T ss_pred EEEEEC-------CCCHHHHHHhcCc---CceEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 444432 2378999998863 46788889999999999875 456777999999999999997664321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. ..+ ..++++|+||.++ .+|+|.|++ ++.+++ +++.+.........+.+++.+.++.+.|+
T Consensus 183 -----pl----~~g-aDivv~S~sK~l~G~~~~~~G~i--~~~~~~----~~~~l~~~~~~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 183 -----PL----ALG-ADLVLHSCTKYLNGHSDVIAGAV--IAKDPQ----VAEELAWWANNLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred -----ch----hhC-CCEEEeecceeccCCCCceeEEE--EeCCHH----HHHHHHHHHHccCCCCCHHHHHHHHcccc
Confidence 11 111 2378899999885 578899998 776677 44555544455566788888888776654
No 126
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=1.8e-19 Score=174.86 Aligned_cols=244 Identities=13% Similarity=0.043 Sum_probs=161.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|.....-++ -.+.+.+++.+.+.... +....+..++++++++++....+ .+++++ ++||++|
T Consensus 40 ~~iD~~~g~~~~~lG~--~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~gg~eA 108 (396)
T PRK02627 40 EYLDFLAGIAVNNLGH--CHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG----MDKVFF--CNSGAEA 108 (396)
T ss_pred EEEECCccHHhccCCC--CCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC----CCEEEE--CCCcHHH
Confidence 7899988765333333 23566666665553211 11112235677788877765533 378988 9999999
Q ss_pred HHHHHHHHHHhC-C----CCEEEEcCCCCcchHHHHhhCCCCe-EE---EecccCCCC----CCCHHHHHHHHHcCCCCc
Q 017967 164 LRLAAALIERYF-P----GAKVLISSPTWGNHKNIFNDARVPW-SE---YRYYDPKTV----GLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 164 l~l~~~l~~~~~-~----gd~Vlv~~P~y~~~~~~~~~~G~~~-~~---v~~~~~~~~----~~d~~~l~~~l~~~~~~~ 230 (363)
++++..+..... + .++|++..++|.++.......+... .. .++. .++ ..|++.+++.+. +++
T Consensus 109 ~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~---~~~ 183 (396)
T PRK02627 109 NEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAIT---DKT 183 (396)
T ss_pred HHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcC---CCe
Confidence 999966543332 1 1789999999988765544333221 11 1111 111 228899999885 346
Q ss_pred EEEEEcCCCCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 231 FILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 231 ~~~~i~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
.++++.+++||+| ..++.+.+++|.++|+++|+++|+||+|.+|...+. ..+...+ ...++ +.+|||.++ +
T Consensus 184 ~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~---~~~~~~~-~~~pd---i~t~sK~~~-~ 255 (396)
T PRK02627 184 AAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK---LFAYQHY-GIEPD---IMTLAKGLG-G 255 (396)
T ss_pred EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc---eeeehhc-CCCCC---EEEEcchhh-C
Confidence 6777788899999 788999999999999999999999999999865431 1121111 22233 347999999 9
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+|+||+ +++ ++ +++.+........++.++++|.++...|+.
T Consensus 256 G~rig~~--~~~-~~----~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 297 (396)
T PRK02627 256 GVPIGAV--LAK-EK----VADVFTPGDHGSTFGGNPLACAAALAVIEI 297 (396)
T ss_pred CcccEEE--EEc-HH----HHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999 776 55 555555433445567899999998877763
No 127
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=3.5e-19 Score=171.73 Aligned_cols=193 Identities=17% Similarity=0.142 Sum_probs=142.2
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 199 (363)
+......|++++|++... +.+++ +.||++++.++ +..++.|||+|++++|+|+.....+. ..|+
T Consensus 50 ~~pt~~~L~~~lA~l~g~--------~~~i~--~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 50 GNPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred CCccHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 556678999999999532 35666 99999999888 45567899999999999986444333 3344
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
++..++ ..|++.+++++++ +++++++++|+||||.+++. ++|.++|+++|+++|+|++|.......
T Consensus 118 ~v~~vd-------~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~di---~~I~~ia~~~g~~vivDeay~~~~~~~- 183 (386)
T PRK08045 118 RVLFVD-------QGDEQALRAALAE---KPKLVLVESPSNPLLRVVDI---AKICHLAREAGAVSVVDNTFLSPALQN- 183 (386)
T ss_pred EEEEeC-------CCCHHHHHHhccc---CCeEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 555542 2588999988863 46688889999999999975 566666899999999999998764321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+. +.+.+ ++++|++|.++ ..+.+.|++ ++.+++ +.+.+.........+.+++.+.++.+.|+.
T Consensus 184 -----pl----~~gaD-ivv~S~tK~l~G~~d~~~G~v--i~~~~~----~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t 247 (386)
T PRK08045 184 -----PL----ALGAD-LVLHSCTKYLNGHSDVVAGVV--IAKDPD----VVTELAWWANNIGVTGGAFDSYLLLRGLRT 247 (386)
T ss_pred -----ch----hhCCC-EEEeecceeccCCCCceeEEE--EeCcHH----HHHHHHHHHHhcCCCCCHHHHHHHHhhhcc
Confidence 11 12223 88999999985 566789998 776676 445555455556668899999988887753
No 128
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.83 E-value=4e-19 Score=171.78 Aligned_cols=190 Identities=16% Similarity=0.175 Sum_probs=138.2
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~ 200 (363)
..-..+|++.+|+++.. +++++ +.||++|+.++ +..++.+||+|+++.+.|.+... .++..|++
T Consensus 60 ~p~~~~le~~la~l~g~--------~~~v~--~ssG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 127 (390)
T PRK08133 60 NPTVTMFQERLAALEGA--------EACVA--TASGMAAILAV--VMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIE 127 (390)
T ss_pred ChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence 34467899999998532 35656 89999998877 45567899999999998876544 45678999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
++.++.+ |++.++++++ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 128 v~~vd~~-------d~~~l~~~i~---~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~-- 192 (390)
T PRK08133 128 TTFVDLT-------DLDAWRAAVR---PNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ-- 192 (390)
T ss_pred EEEECCC-------CHHHHHHhcC---cCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 9988762 6888998886 35678888999999999985 5677888999999999999986554321
Q ss_pred CchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+. ..+ ..+++.|+||.++.+|.|+|++ +..+++.++++.. ..+......+.+.+.++.+.|
T Consensus 193 ----pl----~~g-~Divv~S~sK~~~g~g~~~GG~--vv~~~~~~~~~~~----~~~~~g~~~~~~~a~~~l~gl 253 (390)
T PRK08133 193 ----PL----KLG-ADVVIHSATKYLDGQGRVLGGA--VVGSKELMEEVFG----FLRTAGPTLSPFNAWVFLKGL 253 (390)
T ss_pred ----ch----hhC-CcEEEeecceeecCCcceEeEE--EEcCHHHHHHHHH----HHHHhCCCCCHHHHHHHHccc
Confidence 11 112 2477999999999899999655 3444664444433 333344467777777765554
No 129
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.83 E-value=4.3e-19 Score=171.18 Aligned_cols=243 Identities=14% Similarity=0.110 Sum_probs=158.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
..|||..|...+.-++ ..+.+.+++.+.+.... ...| +..-..+|.+++++++ + .+++++ ++||+
T Consensus 28 ~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~~~~--~~sg~ 94 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGH--AHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS----G----ADRVFF--CNSGA 94 (379)
T ss_pred EEEEcCcchhhccCCC--CCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCCcH
Confidence 6899988743222332 34566666655543211 1223 3344556666666663 2 248877 99999
Q ss_pred HHHHHHHHHHHHhC-----CCCEEEEcCCCCcchHHHHhhCCCCeEE----EecccCCCCC--CCHHHHHHHHHcCCCCc
Q 017967 162 GSLRLAAALIERYF-----PGAKVLISSPTWGNHKNIFNDARVPWSE----YRYYDPKTVG--LDFEGMIADIKAAPGGS 230 (363)
Q Consensus 162 ~al~l~~~l~~~~~-----~gd~Vlv~~P~y~~~~~~~~~~G~~~~~----v~~~~~~~~~--~d~~~l~~~l~~~~~~~ 230 (363)
+++.++..++..+. +||+|++++|+|..+...+...+..... .++..+..+. .|++.+++.+.+ ++
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~ 171 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD---ET 171 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh---Ce
Confidence 99998865543322 3799999999998887666655443221 2221111111 189999998863 35
Q ss_pred EEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 231 FILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
.+++++.++||+|.. ++.+++++|.++|+++++++|+||+|.+|.+.+ ...+... ....++++ +|||.++ +
T Consensus 172 ~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~~~-~~~~~d~~---t~sK~~~-~ 243 (379)
T TIGR00707 172 AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAYEH-YGIEPDII---TLAKGLG-G 243 (379)
T ss_pred eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhHHh-cCCCCCEE---EEccccc-C
Confidence 566666566777764 799999999999999999999999999886542 1112111 12233433 6899999 9
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|+|+||+ +++ ++ +++.+.........+.+.++|.++...|+
T Consensus 244 G~riG~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~aa~aaL~ 284 (379)
T TIGR00707 244 GVPIGAT--LAK-EE----VAEAFTPGDHGSTFGGNPLACAAALAVLE 284 (379)
T ss_pred CcccEEE--EEc-HH----HHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999 665 65 56666654444455788999999886665
No 130
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.83 E-value=3.6e-19 Score=170.72 Aligned_cols=172 Identities=15% Similarity=0.028 Sum_probs=131.2
Q ss_pred chHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
-..++++.+|+++.. +++++ |+|+++++.++ +...+.+||+|+++.++|......++..|++++.++.
T Consensus 45 ~~~~l~~~la~~~g~--------~~i~~--~~g~t~al~~~--l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~ 112 (361)
T cd06452 45 PIKDFHHDLAEFLGM--------DEARV--TPGAREGKFAV--MHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPN 112 (361)
T ss_pred hHHHHHHHHHHHcCC--------ceEEE--eCCHHHHHHHH--HHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEec
Confidence 356889999998522 57877 99999998887 4445679999999999887776778899999999998
Q ss_pred ccCCCCCCCHHHHHHHHHcCC----CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 207 YDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 207 ~~~~~~~~d~~~l~~~l~~~~----~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
+.+.++.+|++.+++++++.. ++++++++++|+||||... ++++|+++|+++|+++|+|++|......
T Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~---~~~~i~~~~~~~~~~vivD~a~~~g~~~----- 184 (361)
T cd06452 113 TGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH---DAKKIAKVCHEYGVPLLLNGAYTVGRMP----- 184 (361)
T ss_pred CCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec---cHHHHHHHHHHcCCeEEEECCcccCCcC-----
Confidence 543346899999999886421 2467888899999999764 5677888899999999999998742211
Q ss_pred hhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHH
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~ 327 (363)
.... ..+..++++|++|.++ ++.|+||+ +++ ++.++
T Consensus 185 -~~~~----~~~~d~~~~s~~K~l~-~~~~~G~l--~~~-~~~~~ 220 (361)
T cd06452 185 -VSGK----ELGADFIVGSGHKSMA-ASAPIGVL--ATT-EEWAD 220 (361)
T ss_pred -CCHH----HcCCCEEEecCCcccc-CCCCeEEE--EEC-HHHHH
Confidence 1111 1134689999999998 56699999 665 55333
No 131
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.83 E-value=4.5e-19 Score=168.57 Aligned_cols=193 Identities=14% Similarity=0.114 Sum_probs=139.2
Q ss_pred cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEc---CCCCcchHHHHhhCCCCeE
Q 017967 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLIS---SPTWGNHKNIFNDARVPWS 202 (363)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~---~P~y~~~~~~~~~~G~~~~ 202 (363)
.-..+|++++|+++.. +++++++ ++||++++..+ +..++.|||.|+++ .|+|..+...++..|++++
T Consensus 54 ~~~~~Le~~lA~~~g~------~~e~ilv--~~gg~~a~~~~--~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~ 123 (346)
T TIGR03576 54 IFEEKVQELGREHLGG------PEEKILV--FNRTSSAILAT--ILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYF 123 (346)
T ss_pred HHHHHHHHHHHHHcCC------CcceEEE--ECCHHHHHHHH--HHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEe
Confidence 3456777777777532 3688988 99999998887 55667899999975 4788888888888898753
Q ss_pred EEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 203 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
.+ .+++.++. .+ +++++++ +++||+|.+++.+++++|+++|+++|+++|+||+|..+..+...
T Consensus 124 ~~---------~~l~~l~~----~~-~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~-- 186 (346)
T TIGR03576 124 ES---------DELSELKK----ID-GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG-- 186 (346)
T ss_pred cc---------CCHHHHhh----Cc-CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCC--
Confidence 22 13444322 12 3445554 56799999999999999999999999999999999987543111
Q ss_pred hhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
..+.. ..+.+ +++.|||| +++|+|+||+ +++ ++ +++.+.+..+...++++++.|.++...|+.
T Consensus 187 ~~~~~---~~~~d-ivv~s~SK--alaG~r~G~v--~~~-~~----li~~l~~~~~~~~~s~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 187 QPPAL---DLGAD-LVVTSTDK--LMDGPRGGLL--AGR-KE----LVDKIKSVGEQFGLEAQAPLLAAVVRALEE 249 (346)
T ss_pred CCCHH---HcCCc-EEEeccch--hccccceEEE--EeC-HH----HHHHHHHhhcCcccCccHHHHHHHHHHHhh
Confidence 11111 22233 66779999 5789999999 665 66 667777776665556788899888877754
No 132
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.83 E-value=4.2e-19 Score=172.42 Aligned_cols=205 Identities=15% Similarity=0.071 Sum_probs=145.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CCCCCCCCC-------cchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~-------~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+.|..+. ..++++.+.++..+.... ..+..+... ....++|+++++++... ++++|++
T Consensus 16 ~~iyld~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~- 83 (398)
T TIGR03392 16 GTVYLDSAA------TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAP-----DAENIVW- 83 (398)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE-
Confidence 456666544 345677888887766532 111222222 23457999999997542 2578988
Q ss_pred eccchhHHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.|+|++++++...+. .+.+||+|++++|.|+. +...++..|++++.++++ .++.+|++.+++.+++ +
T Consensus 84 -t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~ 157 (398)
T TIGR03392 84 -TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLTP---R 157 (398)
T ss_pred -eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhcc---C
Confidence 9999999999854332 14689999999999865 455678899999999984 3467899999999863 4
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
+++++++++|||||.+++. ++|+++|+++|+++|+|++|...... . .+. ..+..+++.|++|.+|.+
T Consensus 158 t~lv~i~~~~n~tG~~~~~---~~i~~~~~~~~~~~ivD~a~~~~~~~-~-----~~~----~~~~d~~~~s~~K~~gp~ 224 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDL---ARAITLAHQYGAVVVVDGAQGVVHGP-P-----DVQ----ALDIDFYAFSGHKLYGPT 224 (398)
T ss_pred ceEEEEECccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcCCCC-C-----Chh----hcCCCEEEEecccccCCC
Confidence 6788889999999999875 55777799999999999998644321 1 111 112346788889998866
Q ss_pred cccceEEEEeeCChh
Q 017967 310 AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G~RvG~i~~v~~~~~ 324 (363)
| +||+ +.+ ++
T Consensus 225 G--~G~l--~~~-~~ 234 (398)
T TIGR03392 225 G--IGVL--YGK-TE 234 (398)
T ss_pred c--eEEE--EEc-HH
Confidence 6 8999 665 55
No 133
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=4.6e-19 Score=171.56 Aligned_cols=194 Identities=20% Similarity=0.197 Sum_probs=141.7
Q ss_pred CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCC
Q 017967 123 LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDAR 198 (363)
Q Consensus 123 ~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G 198 (363)
.+.....+|++.+|++... +..++ +.+|++|+.++ +..++.+||+|+++.|+|..... .+...|
T Consensus 61 ~~~p~~~~le~~lA~l~g~--------~~~i~--~ssG~~Ai~~~--l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~G 128 (398)
T PRK08249 61 NTNPTVQAFEEKVRILEGA--------EAATA--FSTGMAAISNT--LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMG 128 (398)
T ss_pred CCChHHHHHHHHHHHHhCC--------CeEEE--eCChHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCC
Confidence 3456678999999999643 34444 68889998877 45567899999999999987644 345678
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCC
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~ 278 (363)
++++.++. .|++.+++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+....
T Consensus 129 i~v~~vd~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~ 195 (398)
T PRK08249 129 VDVTLCET-------GDHEQIEAEIAK---GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN 195 (398)
T ss_pred eEEEEcCC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC
Confidence 88776642 589999998873 4678888999999999997 4557777999999999999998654321
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+. ..+ ..++++|+||.++..|.++|++ ++.+++ ++++++..........+.+.+.++.+.|+.
T Consensus 196 ------~l----~~~-~Divv~S~sK~l~g~~~~~gG~--vv~~~~----l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t 258 (398)
T PRK08249 196 ------PL----ALG-ADLVIHSATKFLSGHADALGGV--VCGSKE----LMEQVYHYREINGATMDPMSAYLILRGMKT 258 (398)
T ss_pred ------ch----hhC-CCEEeccCceecCCCCCceEEE--EECCHH----HHHHHHHHHHhcCCCCCHHHHHHHHhCcch
Confidence 11 111 2267899999998778888555 344576 444444444455668888888887766543
No 134
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.83 E-value=3.3e-19 Score=164.32 Aligned_cols=220 Identities=21% Similarity=0.182 Sum_probs=145.7
Q ss_pred CCCC-CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh---C-CC----------CEEEEc
Q 017967 119 NKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---F-PG----------AKVLIS 183 (363)
Q Consensus 119 ~~~Y-~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~---~-~g----------d~Vlv~ 183 (363)
..+| +...|++++|+-+|+.+.-. +++| ..||+++++++..++... . +| -+.|+|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~llgv~------~~~v----iv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELLGVP------PENV----IVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHHTS-------GGGE----EE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred ccCCCCccCChHHHHHHHHHHhCCC------HHHE----EEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 3679 88999999999999997443 6888 468888888876544331 1 22 268999
Q ss_pred CCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHH-HHhcC
Q 017967 184 SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV-IQEKN 262 (363)
Q Consensus 184 ~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~-~~~~~ 262 (363)
.|+|..+..+++.+|++.+.||+.+ .|+|.|.+++.+.+.+..+.+++++-.+||||.++|.+..++++.+ ....+
T Consensus 131 vPGYDRHFai~E~~Giemi~VpM~~---dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~D 207 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGIEMIPVPMTE---DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPD 207 (425)
T ss_dssp ES--HHHHHHHHHCT-EEEEEEEET---TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT
T ss_pred CCCchHHHHHHHhhCcEEEecCCCC---CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcC
Confidence 9999999999999999999999964 4999999999998777777789999999999999999999999987 34579
Q ss_pred CeEEEecCCCCCcC-CCCCCch-hHHHHH---HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhh
Q 017967 263 HIPFFDVAYQGFAS-GSLDNDA-SSVRLF---ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 337 (363)
Q Consensus 263 ~~ii~De~y~~~~~-~~~~~~~-~~~~~~---~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~ 337 (363)
..|+.|++|.--.. ++.+... ..+... ....++++.+.|.||+- +||.+|+++ +.+++.++.+.+++..
T Consensus 208 FRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~---aaS~~Nl~~~~~~~~~-- 281 (425)
T PF12897_consen 208 FRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFF---AASEANLAWIKKHLSV-- 281 (425)
T ss_dssp -EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEE---EE-HHHHHHHHHHHHH--
T ss_pred eEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeee---ecCHHHHHHHHHHhcC--
Confidence 99999999975544 2111111 123222 34668999999999988 599999999 4557777777776653
Q ss_pred ccccCCCchHHHHHHhcccccc
Q 017967 338 RPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 338 ~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
...++.-+.|..-.+++.+.
T Consensus 282 --~tIgpdKvNQLRHvrff~d~ 301 (425)
T PF12897_consen 282 --QTIGPDKVNQLRHVRFFKDA 301 (425)
T ss_dssp --H-S---HHHHHHHHHHHHSH
T ss_pred --ceeCccHHHHHHHHHHhcCh
Confidence 34588888888777766553
No 135
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.82 E-value=8.1e-19 Score=170.60 Aligned_cols=205 Identities=18% Similarity=0.089 Sum_probs=145.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCC-------CcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLP-------IEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~-------~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+.|..+. ..++++.+.++..+...... +..... .....++|+.+|+++... ++++|++
T Consensus 19 ~~~yld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~- 86 (401)
T PRK10874 19 AGVYLDSAA------TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAP-----DAKNIVW- 86 (401)
T ss_pred ceEEEeCCc------ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE-
Confidence 456666544 34566778888777663211 000101 122567889999987442 3688988
Q ss_pred eccchhHHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.|+|++++++...+. .+.+||+|++++|.|+. +...++..|++++.++.+ .++.+|++.+++.++ ++
T Consensus 87 -~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~---~~ 160 (401)
T PRK10874 87 -TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG--ADRLPDVDLLPELIT---PR 160 (401)
T ss_pred -ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC--CCCcCCHHHHHHhcC---cC
Confidence 9999999999854432 24699999999999854 556667899999999984 356789999999986 35
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++||||||..++. ++|.++|+++|+++|+|++|...... . .+. .....+++.|++|.+|.+
T Consensus 161 t~lv~i~~~~n~tG~~~~~---~~i~~l~~~~g~~~ivD~a~~~g~~~-~-----~~~----~~~~d~~~~s~~K~~gp~ 227 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDL---ARAITLAHQAGMVVMVDGAQGAVHFP-A-----DVQ----ALDIDFYAFSGHKLYGPT 227 (401)
T ss_pred cEEEEEeCCcccccCcCCH---HHHHHHHHHcCCEEEEECCccccccc-C-----Cch----hcCCCEEEEecccccCCC
Confidence 6788889999999999875 46677799999999999998543221 1 111 112457789999999877
Q ss_pred cccceEEEEeeCChh
Q 017967 310 AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G~RvG~i~~v~~~~~ 324 (363)
| +||+ +.. ++
T Consensus 228 G--~G~l--~~~-~~ 237 (401)
T PRK10874 228 G--IGVL--YGK-SE 237 (401)
T ss_pred c--cEEE--EEc-hH
Confidence 7 5998 554 55
No 136
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.82 E-value=2.2e-18 Score=166.27 Aligned_cols=238 Identities=14% Similarity=0.102 Sum_probs=151.1
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CC-CCCCCCC----cchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEYLPI----EGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~Y~~~----~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
..+|||+.|.+. +. ..++.+.+++.+.... .. ...|... .-..++++++++++. .++.+++
T Consensus 39 ~~~id~~~~~~~---g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~-- 105 (385)
T PRK05958 39 RRMLNFASNDYL---GL-ARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG-------AERALLF-- 105 (385)
T ss_pred ceEEEeeCCCcc---cC-CCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCcEEEE--
Confidence 489999988642 21 1345566666555422 10 1112222 234667777777753 1344444
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEc
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~ 236 (363)
.+|++++..+ +...+.+||.|+++.|+|+.+...++..|++++.++. .|++.+++.++..++++.++++.
T Consensus 106 -~~g~~~~~~~--l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~ 175 (385)
T PRK05958 106 -SSGYAANLAV--LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTE 175 (385)
T ss_pred -CcHHHHHHHH--HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEE
Confidence 5566665544 3344679999999999999999999889999888864 37899999887532346677777
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
+++||||...+ +++|.++|+++|+++|+||+|....++......... .-.+..++++++.||||.||.+| ||+
T Consensus 176 ~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G---g~~ 248 (385)
T PRK05958 176 SVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE-AGLAGEPDVILVGTLGKALGSSG---AAV 248 (385)
T ss_pred ecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh-hCCCCCCceEEEEechhhcccCC---cEE
Confidence 89999998755 667778899999999999999765443110111111 11234568899999999998776 888
Q ss_pred EEeeCChhHHHHHHHHHHhhhcc-cc-CCCchHHHHHHhcccc
Q 017967 317 NVVCSSSDLAARVKSQLKRLARP-MY-SNPPPMLLGIQLSSMN 357 (363)
Q Consensus 317 ~~v~~~~~~~~~~~~~l~~~~~~-~~-~~~s~~~q~~~~~~l~ 357 (363)
+++ ++ +.+.+...... .. .+.+...+.++...|+
T Consensus 249 --~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~ 284 (385)
T PRK05958 249 --LGS-ET----LIDYLINRARPFIFTTALPPAQAAAARAALR 284 (385)
T ss_pred --EcC-HH----HHHHHHHhCccceecCCCCHHHHHHHHHHHH
Confidence 655 66 44444433222 22 2344444444444444
No 137
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=9.6e-19 Score=169.61 Aligned_cols=192 Identities=16% Similarity=0.168 Sum_probs=138.2
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHHhhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~ 200 (363)
.....+|++.+|++... ++.++ +.+|++++.++ +..++.+||+|+++.|+|.. +...++..|++
T Consensus 59 ~p~~~~Le~~lA~l~g~-------~~~v~---~~sG~~Ai~~~--l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~ 126 (405)
T PRK08776 59 NPTRDLLGEALAELEGG-------AGGVI---TATGMGAINLV--LNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFA 126 (405)
T ss_pred ChHHHHHHHHHHHHhCC-------CceEE---EcCHHHHHHHH--HHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcE
Confidence 34467889999988532 24443 57778998887 45557899999999999987 44445667888
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
++.++. .|++.+++.+++ +++++++++||||||.+. ++++|+++|+++|+++|+|++|......
T Consensus 127 v~~v~~-------~d~~~l~~~i~~---~tklV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~~~--- 190 (405)
T PRK08776 127 LITADL-------TDPRSLADALAQ---SPKLVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPALQ--- 190 (405)
T ss_pred EEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 888764 378899988863 467888899999999985 5777888899999999999999753221
Q ss_pred CchhHHHHHHhcCCeEEEEEcCccccccc-cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~-G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.+. ..+ -.+++.|.+|.++.+ +...|++ ++.+++ +.+++.........+.+++.+.++...|+.
T Consensus 191 ---~pl----~~g-aDivv~S~tK~l~g~~~~~~G~v--v~~~~~----l~~~l~~~~~~~g~~~s~~~a~l~~~gl~t 255 (405)
T PRK08776 191 ---KPL----EFG-ADLVLHSTTKYINGHSDVVGGAV--VARDAE----LHQQLVWWANALGLTGSPFDAFLTLRGLRT 255 (405)
T ss_pred ---Ccc----ccc-CCEEEecCceeecCCCCceEEEE--EeCCHH----HHHHHHHHHHhcCCCCCHHHHHHHHhhhCc
Confidence 111 112 237889999999755 4778988 777777 444444333344456788888888765543
No 138
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.81 E-value=1.1e-18 Score=169.01 Aligned_cols=193 Identities=14% Similarity=0.141 Sum_probs=137.7
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (363)
+.....+|++++|++.... ...+ +.+|+.++..+ ++..+.+||+|+++.|.|..+...+ ...|+
T Consensus 63 ~~p~~~~Le~~lA~l~G~~--------~~~~--~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 130 (398)
T PRK07504 63 SNPTVDMFEKRMCALEGAE--------DARA--TASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLPRYGI 130 (398)
T ss_pred CCchHHHHHHHHHHHhCCC--------eeeE--ecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCe
Confidence 4556789999999995332 2233 67888887655 4556789999999999999765543 46788
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++ .+|++.++++++ ++++++++++|+||||.+++ +++|.++|+++|+++|+|++|....+..
T Consensus 131 ~v~~vd-------~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~- 196 (398)
T PRK07504 131 ESTLVD-------GLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK- 196 (398)
T ss_pred EEEEEC-------CCCHHHHHHhcC---cCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 887774 368999999886 35778889999999999987 5566677999999999999998654421
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. +. ...+++.|+||.++.+|+|+|++ ++.+++.+.+ .++..........+.+.+.++...|+
T Consensus 197 -----~~----~~-gaDivv~S~sK~l~g~g~~~GG~--vv~~~~~i~~---~~~~~~~~~g~~~s~~~A~~~l~~L~ 259 (398)
T PRK07504 197 -----PL----EL-GAHIVVYSATKHIDGQGRCLGGV--VLSDKAWIEE---HLQDYFRHTGPSLSPFNAWTLLKGLE 259 (398)
T ss_pred -----ch----hh-CCCEEEeeccccccCCccceEEE--EEeCcHHHHH---HHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 11 11 24578999999999899999765 3344443322 23222233345677777777766554
No 139
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.7e-18 Score=167.34 Aligned_cols=193 Identities=17% Similarity=0.146 Sum_probs=137.1
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (363)
+.....+|++++|++.... ..++ +.+|++|+.++ +..++.+||+|+++.|+|......+ ...|+
T Consensus 59 ~~p~~~~Le~~lA~~~g~~-------~~i~---~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGA-------YGRA---FSSGMAATDCL--LRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHhCCC-------ceEE---eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 5577899999999996443 2333 47789998888 4555789999999999998654433 34677
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++.+++ +++++++++|+||||.. .++++|+++|+++|+++|+|++|.......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~~- 192 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAITP---RTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQQ- 192 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcCc---CCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 7776653 488999998863 56788889999999976 457778888999999999999997654321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+. .. ...+++.|+||.++.+| .+.||+ ++.+++ +.+.+...........+++.+.++...|+.
T Consensus 193 -----p~----~~-gaDivv~S~sK~l~g~~~~~gG~v--v~~~~~----l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t 256 (388)
T PRK07811 193 -----PL----AL-GADVVVHSTTKYIGGHSDVVGGAL--VTNDEE----LDEAFAFLQNGAGAVPGPFDAYLTLRGLKT 256 (388)
T ss_pred -----ch----hh-CCcEEEecCceeecCCCCcEEEEE--EECCHH----HHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence 11 11 22388999999998655 467998 776666 334344333333445666666666665543
No 140
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=2.8e-18 Score=164.68 Aligned_cols=191 Identities=14% Similarity=0.152 Sum_probs=141.3
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~ 199 (363)
+.....+|++++|++.... ..++ +.||++++.++ +..+.+||+|++++|.|+... ..++..|+
T Consensus 50 ~~pt~~~le~~la~l~g~~--------~~~~--~~sG~~ai~~~---~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 50 GNPTRGVLEQAIADLEGGD--------QGFA--CSSGMAAIQLV---MSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH---HHHhCCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 4556789999999996432 2344 78899998766 345679999999999998753 34556899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++++++ +++++++++|+||+| +..++++|+++|+++|+++|+|++|.......
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~~---~tklv~le~P~NP~~---~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~- 182 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAITP---NTKAIFIETPTNPLM---QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR- 182 (366)
T ss_pred eEEEECC-------CCHHHHHHhccc---CceEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCccccccC-
Confidence 9888865 378999998863 467888899999975 57889999999999999999999995432221
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. . ....++++|+||.++- .+.+.||+ ++++++ +.+.+.........+.+++.|.++...|+
T Consensus 183 -----p~----~-~g~di~i~S~sK~~~g~~d~~~G~i--v~~~~~----l~~~~~~~~~~~g~~~s~~~a~l~~~~l~ 245 (366)
T PRK08247 183 -----PL----E-EGADIVIHSATKYLGGHNDVLAGLV--VAKGQE----LCERLAYYQNAAGAVLSPFDSWLLIRGMK 245 (366)
T ss_pred -----ch----h-cCCcEEEeecceeccCCCceeeeEE--ecChHH----HHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence 11 1 1356899999999973 24689998 776566 44444444444455677888888877665
No 141
>PLN02822 serine palmitoyltransferase
Probab=99.80 E-value=1.9e-18 Score=171.14 Aligned_cols=238 Identities=11% Similarity=0.054 Sum_probs=157.4
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-----CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-----~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
.+.+||+.|.|.+..++ +.+.++..+.++. + ....|++..+..+|++++|+++.. ++.|++
T Consensus 109 ~~~id~~s~~~lgl~~~----~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~i~~-- 175 (481)
T PLN02822 109 KDVVNFASANYLGLIGN----EKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDSILY-- 175 (481)
T ss_pred ceEEEeECCCcCCCCCC----HHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCEEEE--
Confidence 37899999987655444 4444444444422 1 112477778899999999999743 467776
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---C----CCC
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---A----PGG 229 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~----~~~ 229 (363)
+.|++ ++..+ +...+++||.|++....+..+...+...|.+++.++.. |.+.++..+.+ . ++.
T Consensus 176 s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~ 245 (481)
T PLN02822 176 SYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKKL 245 (481)
T ss_pred CCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCCC
Confidence 76666 44443 44556799999988877777777777888888888763 33444444332 1 122
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh--cCCeEEEEEcCccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT--RGMELLVAQSYSKNLG 307 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~~ 307 (363)
.+++++..++|+||.+.+ +++|+++|++||+++|+||+|....++.. ......... ..+..+++.||||.||
T Consensus 246 ~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~---G~G~~e~~~v~~~~~dii~~s~sKalg 319 (481)
T PLN02822 246 RRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKS---GRGLSEHFGVPIEKIDIITAAMGHALA 319 (481)
T ss_pred cEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCChHHHcCCCCCCCeEEEecchhhhh
Confidence 367888889999999998 57788889999999999999985555421 111111111 1245688999999999
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhhhccccCC--CchHHHHHHhcccccc
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSN--PPPMLLGIQLSSMNGK 359 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~--~s~~~q~~~~~~l~~~ 359 (363)
++| ||+ +++ ++ +++.++.......++ .|++.|.++...|+..
T Consensus 320 ~~G---G~i--~g~-~~----ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l 363 (481)
T PLN02822 320 TEG---GFC--TGS-AR----VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL 363 (481)
T ss_pred hCC---eEE--EcC-HH----HHHHHHhcCCceeeccccCHHHHHHHHHHHHHH
Confidence 888 999 655 66 555555444333333 3466677765555543
No 142
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.80 E-value=4.5e-18 Score=165.10 Aligned_cols=194 Identities=18% Similarity=0.149 Sum_probs=138.8
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~ 199 (363)
+.....+|+++++++... +..++ +.+|++|+.++ +...+.|||+|+++.|.|.... ..++..|+
T Consensus 63 ~~p~~~~le~~lA~l~g~--------~~~i~--~~sG~~Al~~~--l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~ 130 (403)
T PRK07503 63 SNPTLALLEQRMASLEGG--------EAAVA--LASGMGAITAT--LWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGV 130 (403)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHcCCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence 445578999999998643 22334 67889998887 4455789999999999986543 34557899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++++++ +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 131 ~v~~vd~-------~d~~~l~~~i~~---~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~~- 196 (403)
T PRK07503 131 TVRHVDL-------TDPAALKAAISD---KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQR- 196 (403)
T ss_pred EEEEeCC-------CCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9888876 268899988863 4667778999999998876 5667777999999999999997654321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+. .. ...++++|+||.++.+| .|.||+ + .+++.++++... ........+.+++.+.++.+.|+.
T Consensus 197 -----~l----~~-g~Di~v~S~tK~l~g~gd~~gG~v--~-~~~~l~~~l~~~--~~~~~~g~~~s~~~a~l~l~~L~t 261 (403)
T PRK07503 197 -----PL----EL-GADLVVHSATKYLGGHGDITAGLV--V-GGKALADRIRLE--GLKDMTGAVMSPFDAFLLMRGLKT 261 (403)
T ss_pred -----ch----hh-CCCEEEccccccccCCCceeEEEE--E-cCHHHHHHHHhh--hHHhCcCCCCCHHHHHHHHcCcch
Confidence 11 11 23488999999999766 677877 5 557644443221 112334567888888888776653
No 143
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=6.9e-18 Score=163.21 Aligned_cols=192 Identities=14% Similarity=0.087 Sum_probs=141.6
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~ 199 (363)
+.....+|+++++++.. .+++++ ++||++|+.++ +..++.+||+|+++.|+|..+.. .+...|+
T Consensus 63 ~~pt~~~Le~~lA~l~g--------~~~~l~--~~sgt~Ai~~~--l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 63 ATPTSLALAQRLAEIEG--------GRHALL--QPSGLAAISLV--YFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred CCHHHHHHHHHHHHHhC--------CCeEEE--eccHHHHHHHH--HHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 55567889999998852 257877 99999999988 44557899999999999998764 4567899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++.. +.+.+++.++ ++++++++++|+|||| +..++++|+++|+++|+++|+|++|.....-.
T Consensus 131 ~v~~vd~~-------~~~~l~~~i~---~~tklV~le~p~Np~~---~~~di~~I~~ia~~~gi~livD~a~a~~~~~~- 196 (394)
T PRK07050 131 TVRFYDPL-------IGAGIADLIQ---PNTRLIWLEAPGSVTM---EVPDVPAITAAARARGVVTAIDNTYSAGLAFK- 196 (394)
T ss_pred EEEEECCC-------CHHHHHHhcC---CCCeEEEEECCCCCCc---cHhhHHHHHHHHHHcCCEEEEECCcccccccC-
Confidence 98887641 3467888776 3567888999999996 57789999999999999999999986543211
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ .+. ...+++.|+||.++ -.+.+.|++ ++.+++ +.+.++........+.+++...++.+.|+
T Consensus 197 -----~----l~~-GaDi~v~S~tK~~~g~~~~~gG~v--~~~~~~----~~~~~~~~~~~~G~~~~~~~a~l~lr~l~ 259 (394)
T PRK07050 197 -----P----FEH-GVDISVQALTKYQSGGSDVLMGAT--ITADAE----LHAKLKLARMRLGIGVSADDCSLVLRGLP 259 (394)
T ss_pred -----H----HHc-CCeEEEEECCceecCCCCeeEEEE--EECCHH----HHHHHHHHHHhcCCCCCHHHHHHHHcCCC
Confidence 1 112 23588999999996 234468988 776677 44444444344455778887777766554
No 144
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.80 E-value=1.4e-17 Score=160.34 Aligned_cols=176 Identities=16% Similarity=0.041 Sum_probs=130.3
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecc
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY 207 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 207 (363)
..++++.+|+++.. +.+.+ ++|+++++..+ +..++.+||.|++..+.|......++..|++++.++.+
T Consensus 53 ~~~~~e~lA~~~g~--------~~~~i--~~g~~~a~~~~--~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFLGM--------DEARV--THGAREGKFAV--MHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHhCC--------CceEE--ECChHHHHHHH--HHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 46788889998633 34555 89999998887 44556899999999888554446778999999999975
Q ss_pred cCCCCCCCHHHHHHHHHcCC----CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 208 DPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 208 ~~~~~~~d~~~l~~~l~~~~----~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
++.++.+|++.+++.+++.. ++++++++++|+||||...+ +++|+++|+++|+++|+||+|...... .
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~---~-- 192 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP---V-- 192 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC---C--
Confidence 44568899999999986411 24668888999999998766 456677799999999999999864321 1
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhh
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 336 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~ 336 (363)
... .. ...++++||||.++ +|.|+||+ +++ ++ +++.++..
T Consensus 193 -~~~---~~-~~di~v~s~sK~~~-~~g~~G~l--~~~-~~----~i~~l~~~ 232 (370)
T TIGR02539 193 -SAK---EI-GADFIVGSGHKSMA-ASGPCGVL--GMS-EE----WEDIVLRK 232 (370)
T ss_pred -CHH---Hc-CCCEEEeeCccccc-CCCCEEEE--EEC-HH----HHhhhccc
Confidence 111 12 23466799999998 67889999 665 66 45555443
No 145
>PRK06460 hypothetical protein; Provisional
Probab=99.80 E-value=4.1e-18 Score=163.98 Aligned_cols=189 Identities=15% Similarity=0.077 Sum_probs=129.6
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCC----cchHHHHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW----GNHKNIFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y----~~~~~~~~~~G~ 199 (363)
......+|++++|++.... ..++ +.+|++++..+ +..++.+||+|+++.|.| ..+...++..|+
T Consensus 43 ~~p~~~~L~~~lA~l~g~~-------~~v~---~~sG~~ai~~~--l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~ 110 (376)
T PRK06460 43 ANPTVLELTKKIVELENAE-------MGVA---FSSGMGAISTT--ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGV 110 (376)
T ss_pred CCccHHHHHHHHHHHhCCC-------cEEE---eCCHHHHHHHH--HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence 3567889999999996432 3443 46677888777 455578999999997654 455667788999
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
++..++.+ +.+.+++.++ ++++++++++||||||.+++.++ |.++|+++|+++|+||+|......
T Consensus 111 ~v~~~~~~-------~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d~~~---I~~la~~~g~~vivDea~~~~~~~-- 175 (376)
T PRK06460 111 NVDASNPG-------SDNIIEKAKS---KRYDVVFVENITNPLLRVVDITE---LSKVCKENGSILIVDATFSTPINQ-- 175 (376)
T ss_pred EEEEECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcccCHHH---HHHHHHHcCCEEEEECCcCccccC--
Confidence 98887652 1233444333 35678888999999999999765 667789999999999999764321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSS 355 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~ 355 (363)
.+. .. ...++++|+||.++- .|.|+||+ ++ +++ ++++++........+.++..+..+.+.
T Consensus 176 ----~~l----~~-~~divv~S~sK~l~G~~~~~~G~~--~~-~~~----l~~~l~~~~~~~g~~~~~~~a~~~l~~ 236 (376)
T PRK06460 176 ----KPL----EL-GADIVVHSASKFLAGHNDVIAGLA--AG-YGK----LLNVIDQMRRTLGTSLDPHAAYLTLRG 236 (376)
T ss_pred ----Chh----hc-CCCEEEeecceeccCCCCceEEEE--ec-CHH----HHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 011 11 346899999998852 23679998 55 466 455555554444555666665555443
No 146
>PRK02948 cysteine desulfurase; Provisional
Probab=99.80 E-value=1.5e-18 Score=167.59 Aligned_cols=234 Identities=13% Similarity=-0.021 Sum_probs=151.2
Q ss_pred CCCCCCccccHHHHHHHHHHHccCCCCCCCC--------CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 94 RTEELQPYVLDVVKKAENLMLERGENKEYLP--------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 94 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--------~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
.|..+..++++.+.+++.+...... .++.. ..-..++|+.+++++.. ++++|++ +.|+++++.
T Consensus 4 ld~a~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~i~~--~~g~t~a~~ 74 (381)
T PRK02948 4 LDYAATTPMSKEALQTYQKAASQYF-GNESSLHDIGGTASSLLQVCRKTFAEMIGG------EEQGIYF--TSGGTESNY 74 (381)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHhcC-CCCccccHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCcHHHHHH
Confidence 4455556678888888876663211 11111 11245677888888643 2678987 999999988
Q ss_pred HHHHHHHH--hCCCCEEEEcCCCCcc---hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 166 LAAALIER--YFPGAKVLISSPTWGN---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 166 l~~~l~~~--~~~gd~Vlv~~P~y~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
++...+.. ..+||.|++....|+. +...++..|++++.++++ +++.+|++.+++.++ ++++++++++|+|
T Consensus 75 ~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~---~~~~lv~~~~~~n 149 (381)
T PRK02948 75 LAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAIT---PDTVLASIQHANS 149 (381)
T ss_pred HHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcC---CCCEEEEEECCcC
Confidence 77433211 1478999999855544 444567789999999984 356789999999886 3467888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+ +|.++|+++|+++++|++ +.+...+. .+ ......+++.|++|.+|.+| +|++ +.
T Consensus 150 ~tG~~~~~~---~I~~l~~~~~~~vivD~~-~~~g~~~~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l--~~ 212 (381)
T PRK02948 150 EIGTIQPIA---EIGALLKKYNVLFHSDCV-QTFGKLPI-----DV----FEMGIDSLSVSAHKIYGPKG--VGAV--YI 212 (381)
T ss_pred CcEeehhHH---HHHHHHHHcCCEEEEECh-hhcccccc-----Cc----ccCCCCEEEecHHhcCCCCc--EEEE--EE
Confidence 999998754 677779999999999954 55543211 11 12245677899999999888 7988 54
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
..+.....+............++++.+++.++...|+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~ 250 (381)
T PRK02948 213 NPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAEN 250 (381)
T ss_pred cCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHH
Confidence 42210000000000000113456777777777666554
No 147
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=7.2e-18 Score=162.31 Aligned_cols=193 Identities=12% Similarity=0.085 Sum_probs=142.8
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (363)
+......|++++|++.. .+++++ ++||++++.++ +..++.+||+|+++.|+|......+ ...|+
T Consensus 51 ~npt~~~Le~~lA~leg--------~e~ivv--t~gg~~Ai~~~--l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 51 GNPNRGLLEQTLSELES--------GKGAVV--TNCGTSALNLW--VSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred CCchHHHHHHHHHHHhC--------CCeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 45667899999999953 268877 99999999888 4555789999999999998644333 34567
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.++++++ ++++++++++|+||||.+++.+ +|.++|+++|+++|+|++|....+..
T Consensus 119 ~v~~vd~-------~d~e~l~~~i~---~~tklV~lesP~NPtG~v~dl~---~I~~la~~~gi~vIvDea~~~~~~~~- 184 (388)
T PRK08861 119 KVQFVDQ-------SDAAALDAALA---KKPKLILLETPSNPLVRVVDIA---ELCQKAKAVGALVAVDNTFLTPVLQK- 184 (388)
T ss_pred EEEEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCccccccCC-
Confidence 7777642 47899988886 3567888899999999999865 56667899999999999998654321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +.+ -.++++|++|.++- .+.+.|++ ++.+++ +.+.++..........+++...++.+.|+.
T Consensus 185 -----pl----~~G-aDivv~S~tK~l~G~~d~~gG~i--~~~~~~----~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T 248 (388)
T PRK08861 185 -----PL----ELG-ADFVIHSTTKYINGHSDVIGGVL--ITKTKE----HAEELAWWGNCIGATGTPFDSYMTLRGIRT 248 (388)
T ss_pred -----Cc----ccC-CCEEEeecceeccCCCcceeEEE--EecHHH----HHHHHHHHHhccCCCCChHHHHHHHhcCCC
Confidence 11 112 23789999999874 34778988 666565 444444444455667888888888776653
No 148
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.79 E-value=6.1e-18 Score=163.54 Aligned_cols=194 Identities=15% Similarity=0.129 Sum_probs=135.9
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 199 (363)
+.....+|++++|++... +..++ +.+|+.|+.++ +..++.+||.|+++.|.|... ...+...|+
T Consensus 57 ~~p~~~~le~~lA~l~g~--------~~av~--~~sG~~Ai~~~--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLEGT--------EAAVA--TSSGMGAIAAT--LLTILKAGDHLISDECLYGCTFALLEHALTKFGI 124 (391)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence 344567899999999643 23444 78889998777 455578999999999988644 344557898
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++++ |++.+++.++ ++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 125 ~~~~vd~~-------d~e~l~~~i~---~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~- 190 (391)
T TIGR01328 125 QVDFINMA-------IPEEVKAHIK---DNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN- 190 (391)
T ss_pred EEEEECCC-------CHHHHHHhhc---cCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC-
Confidence 88888762 7889988886 34678888999999999886 5567777999999999999997654321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. ..+ ..++++|+||.+|.+|.|+|++ ++.+++.+++++..... .......+++...++...|+
T Consensus 191 -----~~----~~g-~Divv~S~sK~lgg~g~~~gG~--v~~~~~li~~l~~~~~~--~~~g~~l~~~~a~l~l~~L~ 254 (391)
T TIGR01328 191 -----PV----ALG-VDVVVHSATKYIGGHGDVVAGL--ICGKAELLQQIRMVGIK--DMTGSVISPFDAWLILRGLK 254 (391)
T ss_pred -----ch----hcC-CCEEEccccccccCCCCceEEE--EEcCHHHHHHHHHHHHH--hCCCCCCCcHHHHHHHhCcC
Confidence 11 222 2378899999999999987555 35567744444321111 11123566666666666553
No 149
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.79 E-value=4.5e-18 Score=165.40 Aligned_cols=217 Identities=14% Similarity=0.176 Sum_probs=144.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHc-c-----CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-R-----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~-----~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+.++|..|.. ++++.+++++..... . .....|....+..++++.+++++....+.. ..+|.+
T Consensus 20 ~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~--- 87 (402)
T cd00378 20 ETLELIASEN-------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQP--- 87 (402)
T ss_pred hCeeeeccCC-------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeec---
Confidence 5789886653 346788888754331 1 111335566677778776555543333332 234433
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-----HhhCCCCeEEEecccC-CCCCCCHHHHHHHHHcCCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-----FNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-----~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
.||++++.++ +..++.|||+|++++|+|+.+... ++..|.++..+++..+ +++.+|++.+++.+.. .+++
T Consensus 88 ~sgt~a~~~~--l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~--~~~~ 163 (402)
T cd00378 88 HSGSQANLAV--YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE--FKPK 163 (402)
T ss_pred CCcHHHHHHH--HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh--CCCC
Confidence 4678998877 455578999999999999877543 5667887777776433 2689999999999863 2455
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC-CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
++++++++||+. .++++|+++|+++|+++|+|++| .++.+.+.. ...+ . ..+ +++.|+||.+ +|
T Consensus 164 ~v~~~~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~--~~~~----~-~~d-v~~~s~sK~l--~G 228 (402)
T cd00378 164 LIVAGASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVF--PNPL----P-GAD-VVTTTTHKTL--RG 228 (402)
T ss_pred EEEecCcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhcccC--CCcc----c-CCc-EEEeccccCC--CC
Confidence 777788888753 25778899999999999999994 555543211 1111 1 233 6799999977 79
Q ss_pred ccceEEEEeeCChhHHHHHHHHHHhhh
Q 017967 311 ERIGAMNVVCSSSDLAARVKSQLKRLA 337 (363)
Q Consensus 311 ~RvG~i~~v~~~~~~~~~~~~~l~~~~ 337 (363)
+|.||+ ++++++ +++.+....
T Consensus 229 ~~gg~i--~~~~~~----~~~~l~~~~ 249 (402)
T cd00378 229 PRGGLI--LTRKGE----LAKKINSAV 249 (402)
T ss_pred CCceEE--EeccHH----HHHHHHHHh
Confidence 999999 777656 444454433
No 150
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=4.7e-18 Score=163.03 Aligned_cols=190 Identities=16% Similarity=0.103 Sum_probs=136.4
Q ss_pred CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCC
Q 017967 123 LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDAR 198 (363)
Q Consensus 123 ~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G 198 (363)
.+.....+|++++|++. . ++ .++ +.+|++++.++ +..++.+||+|+++.|+|..+...+ +..|
T Consensus 48 y~~p~~~~Le~~lA~l~-~-------~~-~v~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 48 ASNPTWRALEAALGELE-G-------AE-ALV--FPSGMAAITAV--LRALLRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred CCCccHHHHHHHHHHHc-C-------CC-EEE--ECCHHHHHHHH--HHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 36778899999999995 2 24 444 57778898777 4556789999999999998887654 4579
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCC
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~ 278 (363)
++++.++..+. .+ . +. ++++++++++|+||||.+. ++++|+++|+++|+++|+|++|......
T Consensus 115 ~~v~~v~~~~~------~~---~-~~---~~t~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~~~- 177 (366)
T PRK07582 115 VTVREAPTAGM------AE---A-AL---AGADLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPLGQ- 177 (366)
T ss_pred EEEEEECCCCh------HH---H-hc---cCceEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCcccc-
Confidence 99999886321 11 1 22 2466777899999999765 5777888899999999999998642211
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.++ +.+. .++++|+||.++ .+|+|+||+ ++.+++ +.+.++.........++++.+.++...|.
T Consensus 178 -----~p~----~~g~-Divv~S~sK~l~G~~g~~~G~v--~~~~~~----l~~~l~~~~~~~g~~~~~~~a~l~~r~l~ 241 (366)
T PRK07582 178 -----RPL----ELGA-DLVVASDTKALTGHSDLLLGYV--AGRDPE----LMAAVERWRLLAGAIPGPFEAWLAHRSLG 241 (366)
T ss_pred -----Cch----hcCC-cEEEecccccccCCCCeeEEEE--EcCcHH----HHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 111 1222 368899999884 467999999 776676 44445544445566788888888887766
Q ss_pred c
Q 017967 358 G 358 (363)
Q Consensus 358 ~ 358 (363)
.
T Consensus 242 t 242 (366)
T PRK07582 242 T 242 (366)
T ss_pred c
Confidence 3
No 151
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.79 E-value=1e-17 Score=159.57 Aligned_cols=209 Identities=16% Similarity=0.061 Sum_probs=137.6
Q ss_pred cEEeeccccCCCCCCccccHHHHHHHHHHHccCCC--CCC----CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
+++|....|. |.+.. +.+.+++.+.++.... ..| .......++++.+++++.. ++ .++ +.
T Consensus 3 ~~~~~~~~~~---~~~~~-~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~-~iv--~~ 68 (349)
T cd06454 3 VLNFCSNDYL---GLANH-PEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK-------EA-ALV--FS 68 (349)
T ss_pred ceecccCCcc---ccCCC-HHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC-------CC-EEE--ec
Confidence 4556555443 33322 5666666666542110 112 2233446788888887632 23 333 56
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC--CCCcEEEEEc
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHG 236 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~~~i~ 236 (363)
+|++++..+ +..++.+||.|+++.|.|+.+...++..|++++.++. +|++.+++.+++. ++++++++++
T Consensus 69 sg~~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~ 139 (349)
T cd06454 69 SGYAANDGV--LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTE 139 (349)
T ss_pred cHHHHHHHH--HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEe
Confidence 667776655 3444679999999999999998888999999988753 4778888888753 2456788889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH-HhcCCeEEEEEcCccccccccccceE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
+++||||...+ +++|+++|+++|+++|+|++|........ .. ....+ ......+++++|+||.++.+| ||
T Consensus 140 ~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~-~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~ 210 (349)
T cd06454 140 GVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPH-GR--GVEEFGGLTDDVDIIMGTLGKAFGAVG---GY 210 (349)
T ss_pred ccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCC-CC--ChhhhccccccCcEEEeechhhhcccC---CE
Confidence 99999998865 56778889999999999999864322211 01 11111 123356899999999998655 98
Q ss_pred EEEeeCChhHHHH
Q 017967 316 MNVVCSSSDLAAR 328 (363)
Q Consensus 316 i~~v~~~~~~~~~ 328 (363)
+ +.+ ++..++
T Consensus 211 i--~~~-~~~~~~ 220 (349)
T cd06454 211 I--AGS-KELIDY 220 (349)
T ss_pred E--ECC-HHHHHH
Confidence 8 554 663333
No 152
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1.3e-17 Score=160.77 Aligned_cols=192 Identities=17% Similarity=0.142 Sum_probs=137.0
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH---hhCCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---NDARVP 200 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~ 200 (363)
......+|++.+|+++.. +++++ +.+|++|+.++ +..++.+||+|+++.|.|..+...+ +..|++
T Consensus 51 ~np~~~~lE~~lA~l~g~--------~~~l~--~~sG~~Ai~~~--l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~ 118 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGG--------VDALA--FNSGMAAISTL--FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVK 118 (385)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcE
Confidence 455678999999999632 45666 79999998877 5566889999999999999887766 445766
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
+..+. +|++.+++++++ .+++++++++|+||||.+++. ++|+++|+++|+++|+|++|.......
T Consensus 119 v~~~~--------~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~dl---~~I~~la~~~gi~livD~t~a~~~~~~-- 183 (385)
T PRK08574 119 VVLAY--------PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVIDV---PEVAKAAKELGAILVVDNTFATPLLYR-- 183 (385)
T ss_pred EEEEC--------CCHHHHHHhcCc--cCceEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCCccccCC--
Confidence 65542 367889888863 146677789999999999874 567888999999999999985332111
Q ss_pred CchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. .. ...+++.|+||.++.+|-++ |++ ++.+++. .+.++..........+++...++...|+
T Consensus 184 ----~l----~~-GaDivv~S~sK~l~g~~d~~gG~v--i~~~~~~----~~~~~~~~~~~g~~~~p~~a~l~l~~l~ 246 (385)
T PRK08574 184 ----PL----RH-GADFVVHSLTKYIAGHNDVVGGVA--VAWSGEF----LEELWEWRRRLGTIMQPFEAYLVLRGLK 246 (385)
T ss_pred ----hh----hh-CCcEEEeeCceeecCCCCceeEEE--EECcHHH----HHHHHHHHHhcCCCCCHHHHHHHHcccC
Confidence 11 11 24588999999998777765 656 5666764 3444333333344666776666666554
No 153
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.79 E-value=2.2e-18 Score=168.10 Aligned_cols=160 Identities=17% Similarity=0.118 Sum_probs=123.2
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~ 199 (363)
+.....+|++.+|+++.. +..++ +.+|+.|+..+ +..++.+||+|+++.+.|.+.. ..++..|+
T Consensus 55 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 122 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEGG--------VAALA--VASGQAAITYA--ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGI 122 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCc
Confidence 445568999999999632 34555 89999998777 5556789999999999986543 34567899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++++++ +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 123 ~v~~v~~-------~d~~~l~~~l~~---~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~~- 188 (418)
T TIGR01326 123 EVRFVDP-------DDPEEFEKAIDE---NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLCR- 188 (418)
T ss_pred EEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcCC-
Confidence 9988874 178999998863 4667778999999999876 5677778999999999999986432110
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
+ .+. ...+++.|+||.++.+|+|+||+ +++
T Consensus 189 -----~----l~~-g~Divv~S~sK~l~g~G~~lGg~--v~~ 218 (418)
T TIGR01326 189 -----P----IDH-GADIVVHSATKYIGGHGTAIGGV--IVD 218 (418)
T ss_pred -----c----hhc-CCeEEEECccccccCCccceEEE--EEe
Confidence 1 112 35789999999999999999999 554
No 154
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.79 E-value=9.6e-18 Score=163.37 Aligned_cols=205 Identities=14% Similarity=0.046 Sum_probs=143.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCC----CCC----CCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK----EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+-|..+. ..++++.+.+++.+........ .|. ...-..++|+++|+++... ++++|++
T Consensus 23 ~~iYld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~- 90 (406)
T PRK09295 23 PLAYLDSAA------SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINAR-----SAEELVF- 90 (406)
T ss_pred ceEEEeCcc------cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcC-----CCCeEEE-
Confidence 356665443 3556777888876665321100 110 0122568889999987542 2578988
Q ss_pred eccchhHHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.|+|++++++...+. .+.+||+|+++++.|+. +...++..|++++.++.+ .++.+|++.+++.+++ +
T Consensus 91 -t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~---~ 164 (406)
T PRK09295 91 -VRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFDE---R 164 (406)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcCC---C
Confidence 9999999998854331 35699999999987753 455667889999999984 3567899999998863 5
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++|+||||..++. ++|.++|+++|+++++|++|...... . .+ ......+++.|++|.+|.+
T Consensus 165 t~lv~l~~~~n~tG~~~~~---~~i~~~~~~~~~~vivD~a~~~g~~~-~-----~~----~~~~~D~~~~s~~K~~gp~ 231 (406)
T PRK09295 165 TRLLAITHVSNVLGTENPL---AEMIALAHQHGAKVLVDGAQAVMHHP-V-----DV----QALDCDFYVFSGHKLYGPT 231 (406)
T ss_pred cEEEEEecchhcccccCCH---HHHHHHHHHcCCEEEEEcccccCccc-c-----Cc----hhcCCCEEEeehhhccCCC
Confidence 6788889999999999985 55677799999999999998654321 1 11 1112347889999988866
Q ss_pred cccceEEEEeeCChh
Q 017967 310 AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G~RvG~i~~v~~~~~ 324 (363)
| +||+ +.+ ++
T Consensus 232 G--~G~l--~~~-~~ 241 (406)
T PRK09295 232 G--IGIL--YVK-EA 241 (406)
T ss_pred C--cEEE--EEc-hH
Confidence 6 7999 665 54
No 155
>PLN02483 serine palmitoyltransferase
Probab=99.79 E-value=2e-17 Score=164.13 Aligned_cols=220 Identities=13% Similarity=0.077 Sum_probs=149.7
Q ss_pred CCcEEeeccccCCCCC-CccccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 83 EKKLNLGVGAYRTEEL-QPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~-~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
...+||+...|..... .+.+.+.+.+++.+.... +....|+...+..++++++|+++.. ++.|++ +.|
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~--~~G 170 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PAAIVF--GMG 170 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------CcEEEE--CCH
Confidence 4689999888864432 233456777777665422 2224588888999999999999753 456655 554
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC-----C-----CC
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----P-----GG 229 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~-----~~ 229 (363)
..+...+ +..++.+||.|++.+|+|..+...++..|++++.++.. |.+.+++.+++. + .+
T Consensus 171 -~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 171 -YATNSTI--IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence 4443333 34457899999999999999999999999999999852 456666665421 1 12
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH--hcCCeEEEEEcCccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLG 307 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~~ 307 (363)
++++++....|++|... ++++|+++|+++++++|+||+|.....+. ....+..+. +..+..|+++||||.||
T Consensus 241 k~livve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~s~g~~G~---~G~g~~~~~~v~~~~~dI~~~SfSKs~g 314 (489)
T PLN02483 241 KIIVIVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAHSIGAVGK---TGRGVCELLGVDPADVDIMMGTFTKSFG 314 (489)
T ss_pred eEEEEECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcCccCccCC---CCCchHHhcCCCcccCcEEEEecchhcc
Confidence 33555444569999875 56677888999999999999987433321 111111221 22356799999999999
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhhh
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLA 337 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~ 337 (363)
++| ||+ +++ ++ +++.++...
T Consensus 315 ~~G---G~i--~~~-~~----li~~l~~~~ 334 (489)
T PLN02483 315 SCG---GYI--AGS-KE----LIQYLKRTC 334 (489)
T ss_pred cCc---eEE--EcC-HH----HHHHHHHhC
Confidence 877 999 654 66 566666543
No 156
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.78 E-value=9.3e-18 Score=162.71 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=140.4
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCC----cchHHHHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW----GNHKNIFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y----~~~~~~~~~~G~ 199 (363)
+.....+|++.+|++... ++.++ +.+|+.|+..+ +..++.+||+|+++...| ..+...++..|+
T Consensus 68 ~~p~~~~le~~lA~l~g~--------~~al~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 68 GNPTVSMFEERLRLIEGA--------EACFA--TASGMSAVFTA--LGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH--HHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 455578999999999532 35555 79999998876 455678999999988544 444556778899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++++++ +++++++.+|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~~---~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~- 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALSV---PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR- 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 9998864 388999998873 4678888999999998875 6677778999999999999997554321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+. +. ...+++.|++|.++..|.++ |++ +++ ++.+. +.++...+....+.+++.+.++.+.|+.
T Consensus 202 -----~~----~~-gaDivv~S~tK~l~g~g~~~gG~v--~~~-~~~~~---~~l~~~~~~~g~~~s~~~a~l~l~~L~t 265 (403)
T PRK07810 202 -----GL----PL-GADVVVYSGTKHIDGQGRVLGGAI--LGD-REYID---GPVQKLMRHTGPALSAFNAWVLLKGLET 265 (403)
T ss_pred -----hh----hc-CCcEEEccCCceecCCcCceeEEE--EeC-hHHHH---HHHHHHHHHhCCCCCHHHHHHHHhccCc
Confidence 11 11 23578899999998889998 666 555 44322 2233333344557888888888776653
No 157
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.78 E-value=2.1e-17 Score=158.88 Aligned_cols=192 Identities=19% Similarity=0.149 Sum_probs=141.8
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 199 (363)
......+|++.++++... +..++ +.+|++|+.++ +..++.+||+|+++.+.|...... ++..|+
T Consensus 38 ~~p~~~~le~~la~l~g~--------~~a~~--~~sG~~Ai~~~--l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALEGG--------EAALA--FSSGMAAISTV--LLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHHCC--------CCEEE--EcCHHHHHHHH--HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 566678999999998532 34555 78899998888 555578999999999999876543 446788
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
++..++.+ |++.+++.+++ +++++++.+|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 106 ~~~~v~~~-------d~~~l~~~i~~---~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~- 171 (369)
T cd00614 106 EVTFVDPD-------DPEALEAAIKP---ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR- 171 (369)
T ss_pred EEEEeCCC-------CHHHHHHhcCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC-
Confidence 88887652 58889888863 4667888999999999886 5677788999999999999987654321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. +. ...+++.|+||.++.+| .+.||+ ++.+++. ++.++........+.+++.+.++...|+
T Consensus 172 -----~~----~~-g~Divv~S~tK~l~g~~~~~gG~v--~~~~~~l----~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 234 (369)
T cd00614 172 -----PL----EL-GADIVVHSATKYIGGHSDVIAGVV--VGSGEAL----IQRLRFLRLALGTILSPFDAWLLLRGLK 234 (369)
T ss_pred -----hh----hh-CCcEEEeccceeccCCCCceEEEE--EeCcHHH----HHHHHHHHHhhCCCCCHHHHHHHHcCCC
Confidence 11 11 34588999999998666 789999 7765464 4444444333455677888887766664
No 158
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.78 E-value=1.4e-17 Score=163.08 Aligned_cols=246 Identities=16% Similarity=0.119 Sum_probs=160.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-|+ -.+.+.+++.+.+.... ..+.+..+..+|++++++++.. .++|++ +.||++|
T Consensus 49 ~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~-~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~sGseA 116 (423)
T TIGR00713 49 EYIDYVLSWGPLILGH--AHPRVVEAVKEALERGT-SYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNSGTEA 116 (423)
T ss_pred EEEEccccccccccCC--CCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCCHHHH
Confidence 7899988864322232 35677777666664432 2223567889999999998532 257877 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh---CCCCeEEEecccC-------CCC---CCCHHHHHHHHHcCCCCc
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFND---ARVPWSEYRYYDP-------KTV---GLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~---~G~~~~~v~~~~~-------~~~---~~d~~~l~~~l~~~~~~~ 230 (363)
++.+..+...+...++|++..++|.++...+.. .|......+..+. ... ..|++.+++.+...+++.
T Consensus 117 ~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~ 196 (423)
T TIGR00713 117 TMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEI 196 (423)
T ss_pred HHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcE
Confidence 999866655555568999999999987543321 1111111111000 000 127899999887533333
Q ss_pred -EEEEEcCCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc
Q 017967 231 -FILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (363)
Q Consensus 231 -~~~~i~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l 308 (363)
.+++-+.++| +|.+.+ .+.+++|.++|+++|+++|+||+|.+|.++. ..... .....+++ .+|||.++
T Consensus 197 aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~----~~~~~-~~~~~pDi---~t~sK~l~- 266 (423)
T TIGR00713 197 AGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL----GGAQE-YFGVEPDL---TTLGKIIG- 266 (423)
T ss_pred EEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc----chhHH-HhCCCcch---hhhhhhhc-
Confidence 4455478999 798887 6889999999999999999999999996542 11111 11222332 37999999
Q ss_pred ccccceEEEEeeCChhHHHHHHHHHHh---hhccccCCCchHHHHHHhccccc
Q 017967 309 YAERIGAMNVVCSSSDLAARVKSQLKR---LARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 309 ~G~RvG~i~~v~~~~~~~~~~~~~l~~---~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+|+|+||+ +++ ++ +.+.+.. ......++.++++|.++...|+.
T Consensus 267 ~G~pig~v--~~~-~~----i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~ 312 (423)
T TIGR00713 267 GGLPVGAF--GGR-RE----IMERLAPEGPVYQAGTLSGNPLAMAAGLATLKL 312 (423)
T ss_pred CCCceeee--eEH-HH----HHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHH
Confidence 99999999 665 56 4554432 11223447788888887666653
No 159
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.78 E-value=1.2e-17 Score=162.89 Aligned_cols=251 Identities=13% Similarity=0.046 Sum_probs=155.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|......++ -.+.+.+++.+.+... ..|....+..++...+++.+....+. ..+++++ +.||++|
T Consensus 37 ~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~--~~sgsea 108 (413)
T cd00610 37 RYLDFLSGIGVLNLGH--NHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPE--GLDKVFF--VNSGTEA 108 (413)
T ss_pred EEEEcCccHHhhccCC--CCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEE--cCcHHHH
Confidence 7899987642212222 2455666665555321 23433222334444444444333332 3578888 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC-------------CCCeEEEecccC----CCCCCCHHHHHHHHHcC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-------------RVPWSEYRYYDP----KTVGLDFEGMIADIKAA 226 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~~~----~~~~~d~~~l~~~l~~~ 226 (363)
++.+..++..+.++++|++.+++|.++....... +.+++.+|..+. ..+..|++.+++.++..
T Consensus 109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 188 (413)
T cd00610 109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH 188 (413)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC
Confidence 9998665544568899999999998865443321 224556665211 12445899999998754
Q ss_pred CCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 227 PGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
+++..++++...+|++|..+ +.+.+++|.++|+++|+++|+||+|.++...+ ..... ...+...+ +.||||.
T Consensus 189 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~-~~~~~~~d---~~t~sK~ 261 (413)
T cd00610 189 PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAF-EHFGVEPD---IVTLGKG 261 (413)
T ss_pred CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhH-hhcCCCCC---eEEEccc
Confidence 34455666555566779876 67779999999999999999999999874332 11111 11121222 4589999
Q ss_pred cccccccceEEEEeeCChhHHHHHHHHH--HhhhccccCCCchHHHHHHhcccc
Q 017967 306 LGLYAERIGAMNVVCSSSDLAARVKSQL--KRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~~~~~~~~~~l--~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++ .|+|+||+ +++ ++ +++.+ .........+.++++|.++...|+
T Consensus 262 l~-~g~~~g~~--~~~-~~----~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~ 307 (413)
T cd00610 262 LG-GGLPLGAV--LGR-EE----IMDAFPAGPGLHGGTFGGNPLACAAALAVLE 307 (413)
T ss_pred cc-CccccEEE--EEc-HH----HHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99 58999999 664 66 44443 223233345677777777755543
No 160
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.78 E-value=2e-17 Score=159.89 Aligned_cols=192 Identities=15% Similarity=0.147 Sum_probs=132.7
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 199 (363)
+.....+|++.+|+++.. ++.+ + +.+|+.++.++ +..++.+||+|+++.|.|......+. ..|+
T Consensus 59 ~~pt~~~Le~~lA~l~G~-------~~al-~--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGG-------EEAL-A--FGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred CCcchHHHHHHHHHHhCC-------CcEE-E--ECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence 455578999999999642 2344 3 57778887766 55567899999999998877655543 3455
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
++..++. .|++.+++++++ +++++++++|+||||.+++. ++|.++|+++|+++|+|++|.......
T Consensus 127 ~~~~~~~-------~d~~~l~~~i~~---~tklV~lesp~NptG~v~dl---~~I~~la~~~g~~vivD~a~a~~~~~~- 192 (386)
T PRK06767 127 THSFCDM-------ETEADIENKIRP---NTKLIFVETPINPTMKLIDL---KQVIRVAKRNGLLVIVDNTFCSPYLQR- 192 (386)
T ss_pred EEEEeCC-------CCHHHHHHhhCc---CceEEEEeCCCCCCceecCH---HHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 5444432 478999988863 56788889999999999875 566667899999999999986433321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. ..+ ..+++.|+||.++.+|.|+ ||+ +++ ++.++++.+... .......+++.+.++...|+
T Consensus 193 -----pl----~~g-~Div~~S~sK~l~g~g~~~gG~v--~~~-~~~i~~~~~~~~---~~~g~~~~~~~a~l~~~~L~ 255 (386)
T PRK06767 193 -----PL----ELG-CDAVVHSATKYIGGHGDVVAGVT--ICK-TRALAEKIRPMR---KDIGGIMAPFDAWLLLRGLK 255 (386)
T ss_pred -----ch----hcC-CcEEEecCcceecCCCCceeEEE--EeC-hHHHHHHHHHHH---HHhCCCCCHHHHHHHHcCCC
Confidence 11 122 2377889999999889996 788 655 554443333222 22334557777777766655
No 161
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=1.7e-17 Score=160.64 Aligned_cols=243 Identities=13% Similarity=0.075 Sum_probs=154.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|. -.+.+.+++.+.++... ...| ......++.+.++++ .+ .+++++ ++||+
T Consensus 32 ~~lD~~~g~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~----~~----~~~v~~--~~sGs 98 (389)
T PRK01278 32 RYLDFASGIAVNSLGH--AHPHLVEALKEQAEKLWHVSNLY-RIPEQERLAERLVEN----SF----ADKVFF--TNSGA 98 (389)
T ss_pred EEEECCccHhhccCCC--CCHHHHHHHHHHHHhcCcccccc-CChHHHHHHHHHHhh----CC----CCEEEE--cCCcH
Confidence 6888877642222232 23455555555443211 0111 122233444444443 11 368877 99999
Q ss_pred HHHHHHHHHHHHh--CCCC----EEEEcCCCCcchHHHHhhCCCCeEEEeccc--CCCC----CCCHHHHHHHHHcCCCC
Q 017967 162 GSLRLAAALIERY--FPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYD--PKTV----GLDFEGMIADIKAAPGG 229 (363)
Q Consensus 162 ~al~l~~~l~~~~--~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~--~~~~----~~d~~~l~~~l~~~~~~ 229 (363)
+|++.+..+...+ .+|| +|++.+++|.++.......+.......... ..++ ..|++.+++.+.+ +
T Consensus 99 eA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~ 175 (389)
T PRK01278 99 EAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP---N 175 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC---C
Confidence 9999986655433 3666 899999999988766654443322211100 0111 1589999998863 4
Q ss_pred cEEEEEcCCCCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc
Q 017967 230 SFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (363)
Q Consensus 230 ~~~~~i~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l 308 (363)
++++++...+||+| .+++.+.+++|.++|++||+++|+||+|.++...+. ......+ ...++ +.+|||.++
T Consensus 176 ~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~-~~~pd---i~t~sK~l~- 247 (389)
T PRK01278 176 TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK---LFAHEWA-GVTPD---IMAVAKGIG- 247 (389)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---ceeeccc-CCCCC---EEEEehhcc-
Confidence 66777777788888 789999999999999999999999999998865431 1111111 11122 358999998
Q ss_pred ccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 309 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 309 ~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+|+|+||+ +++ ++ +.+.+........++.++++|.++...|+
T Consensus 248 ~G~~ig~~--~~~-~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 289 (389)
T PRK01278 248 GGFPLGAC--LAT-EE----AAKGMTPGTHGSTYGGNPLAMAVGNAVLD 289 (389)
T ss_pred CCcceEEE--EEc-HH----HHhccCCCCCCCCCCccHHHHHHHHHHHH
Confidence 99999999 776 44 45555544455566788899998866554
No 162
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.77 E-value=3.3e-17 Score=158.03 Aligned_cols=192 Identities=18% Similarity=0.186 Sum_probs=136.5
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 199 (363)
+.....+|++.+++++.. +.+++ +.+|+.|+.++ +..++.+||+|+++.+.|... ...++..|+
T Consensus 52 ~~p~~~~le~~la~l~g~--------~~~~~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 52 ANPTVAAFEERIAALEGA--------ERAVA--TATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 344578999999998532 35555 89999998887 455578999999999988653 345677899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++.. |++.++++++ ++++++++++|+||+|...+ +++|.++|+++|+++|+|++|..+....
T Consensus 120 ~v~~v~~~-------d~~~l~~~i~---~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~- 185 (380)
T TIGR01325 120 EVSFVDPT-------DLNAWEAAVK---PNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ- 185 (380)
T ss_pred EEEEECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 98888752 6888888876 34678888999999999875 5667777999999999999997654321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++ +. ...+++.|+||.++.+|.++|.+ +..+++.++++ +..........+++...++...|+
T Consensus 186 -----pl----~~-g~Divv~S~sK~l~g~g~~~gG~--vv~~~~~~~~l----~~~~~~~g~~~~p~~a~~~l~~l~ 247 (380)
T TIGR01325 186 -----PL----KL-GADVVVYSATKHIDGQGRVMGGV--IAGSEELMAEV----AVYLRHTGPAMSPFNAWVLLKGLE 247 (380)
T ss_pred -----ch----hh-CCCEEEeeccceecCCCCeEEEE--EEeCHHHHHHH----HHHHHhhCCCCCHHHHHHHHhccC
Confidence 11 11 23477889999999888888444 24446644444 333333444556666666655544
No 163
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.77 E-value=3.1e-17 Score=160.04 Aligned_cols=239 Identities=13% Similarity=0.071 Sum_probs=147.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC------CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG------ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
..++++...|.... ..+.+.++..+....- ....|+......+|++++|+++.. ++.+++ +
T Consensus 47 ~~~~~~sn~yl~l~----~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-------~~~i~~--~ 113 (410)
T PRK13392 47 RVTIWCSNDYLGMG----QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-------ESALLF--T 113 (410)
T ss_pred eEEEEECCCccCCC----CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-------CCEEEE--C
Confidence 57888877664222 3456666665544221 001232333567899999999642 355655 4
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEc
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHG 236 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~ 236 (363)
. |+.+...+...+....+||.|++..+.|..+...++..|.++..++. -|.+.+++.+.... +++++++++
T Consensus 114 s-G~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v~i~ 185 (410)
T PRK13392 114 S-GYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLIAFE 185 (410)
T ss_pred c-HHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEEEEe
Confidence 4 56665554222222248898888777777777777888988766643 14556666665322 357788899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe-EEEEEcCccccccccccceE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~~l~G~RvG~ 315 (363)
+|+||||.+++ +++|.++|+++++++|+||+|....++.. ...+.......++ .++++||||.||++| ||
T Consensus 186 ~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~---g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~ 256 (410)
T PRK13392 186 SVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR---GGGIAERDGLMDRIDMIQGTLAKAFGCLG---GY 256 (410)
T ss_pred CCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC---CCchhhhccCCCCCcEEEEEChHhhhccc---ch
Confidence 99999999987 56667779999999999999983333211 1111111111123 388899999999988 89
Q ss_pred EEEeeCChhHHHHHHHHHHhhhccc--cCCCchHHHHHHhcccccc
Q 017967 316 MNVVCSSSDLAARVKSQLKRLARPM--YSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 316 i~~v~~~~~~~~~~~~~l~~~~~~~--~~~~s~~~q~~~~~~l~~~ 359 (363)
+ ++ +++ +++.+++..... ....+++.|.++...|+..
T Consensus 257 ~--~~-~~~----~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~ 295 (410)
T PRK13392 257 I--AA-SAD----LIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL 295 (410)
T ss_pred h--hc-CHH----HHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH
Confidence 8 55 466 555555554332 2234556677666666543
No 164
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=2.6e-17 Score=159.97 Aligned_cols=237 Identities=16% Similarity=0.108 Sum_probs=154.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
..+|+..|.....-++ -.+.+.+++.+.+.. . ....|....+ .+|.+.+++++. . . .++++++ +.||+
T Consensus 44 ~~lD~~s~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~~-~---~-~~~~v~~--~~sgs 113 (398)
T PRK03244 44 EYLDLLGGIAVNALGH--AHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELLG-A---P-EGGRVFF--CNSGA 113 (398)
T ss_pred EEEECCcCHhhccCCC--CCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhCC-C---C-CCCEEEE--eCchH
Confidence 7899988754333332 245666666655532 1 1134643333 466666666532 1 1 2468888 99999
Q ss_pred HHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHh-hCCC------------CeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 162 GSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 162 ~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
+|++.+..+... +| +.|+..+++|.++..... ..|. ++..+|. .|++.+++.+.
T Consensus 114 ea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~--- 181 (398)
T PRK03244 114 EANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVD--- 181 (398)
T ss_pred HHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhc---
Confidence 999999665433 45 577777889987754332 2221 2223322 37889998875
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHH-HHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
++..++++.+++||||.+++.++ +++|.++|+++|+++|+||+|.+|...+ ...... .....+++ .+|||.+
T Consensus 182 ~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~~-~~~~~pDi---~t~sK~l 254 (398)
T PRK03244 182 DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG---AWFAHQ-HDGVTPDV---VTLAKGL 254 (398)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc---hHHhhh-hhCCCCCE---EEEchhh
Confidence 34667777888999999997766 9999999999999999999998876542 111111 11222343 3889999
Q ss_pred ccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ +|+|+||+ +++ ++ +++.+........++.++++|.++...|+
T Consensus 255 ~-~G~~ig~~--~~~-~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 297 (398)
T PRK03244 255 G-GGLPIGAC--LAF-GP----AADLLTPGLHGSTFGGNPVACAAALAVLD 297 (398)
T ss_pred h-CCcccEEE--EEc-HH----HHhhccCCCCcCCCCCCHHHHHHHHHHHH
Confidence 9 99999999 776 55 45555443334455788899998887765
No 165
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.76 E-value=3.4e-17 Score=158.95 Aligned_cols=197 Identities=17% Similarity=0.167 Sum_probs=136.8
Q ss_pred CCCccccHHHHHHHHHHHccCC---CCCCCCCcc----hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHH
Q 017967 97 ELQPYVLDVVKKAENLMLERGE---NKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAA 169 (363)
Q Consensus 97 ~~~~~~~~~v~~a~~~~~~~~~---~~~Y~~~~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~ 169 (363)
.+...+++.+.+++.+...... ...|....+ ..++|+.+++++... +++|++ +.|+++++.++..
T Consensus 24 ~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~------~~~v~~--~~~~t~~l~~~~~ 95 (397)
T TIGR01976 24 PAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD------PPEVVF--GANATSLTFLLSR 95 (397)
T ss_pred CccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC------CCeEEE--eCCHHHHHHHHHH
Confidence 3445567788888766653211 123543333 458888888886432 346777 8999999887644
Q ss_pred HHH-HhCCCCEEEEcCCCCcchH----HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCC
Q 017967 170 LIE-RYFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI 244 (363)
Q Consensus 170 l~~-~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~ 244 (363)
.+. .+.|||+|++.+|.|.... ..++..|++++.++.++ +++.+|++.+++.++ ++++++++++|+||||.
T Consensus 96 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~ 171 (397)
T TIGR01976 96 AISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE-ATGELHPDDLASLLS---PRTRLVAVTAASNTLGS 171 (397)
T ss_pred HHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc-cCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCc
Confidence 332 3569999999999886543 45577899999998843 357789999999886 35678888999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 245 ~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
.++ +++|.++|+++|+++|+|+++.. ... ...+ .+.+ ..+++.|++|.+| .|+|++ +++ ++
T Consensus 172 ~~~---~~~i~~~~~~~~~~~ivD~a~~~-~~~-----~~~~---~~~~-~d~~~~s~~K~~g---~~~G~l--~~~-~~ 232 (397)
T TIGR01976 172 IVD---LAAITELVHAAGALVVVDAVHYA-PHG-----LIDV---QATG-ADFLTCSAYKFFG---PHMGIL--WGR-PE 232 (397)
T ss_pred cCC---HHHHHHHHHHcCCEEEEehhhhc-ccc-----CCCH---HHcC-CCEEEEechhhcC---CceEEE--EEc-HH
Confidence 876 66677779999999999999632 111 1111 1222 3355689999874 579999 665 55
No 166
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.76 E-value=3.3e-17 Score=159.02 Aligned_cols=206 Identities=14% Similarity=0.083 Sum_probs=143.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC-----CcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
++++|++|.+. . ..++.+.++..+. . ....|.+ ..|.+++++++++++....+.. .+++.+ +.
T Consensus 21 ~~~~l~~g~~~-~----~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~--~~ 88 (398)
T cd00613 21 SMSFLGSGTYK-H----NPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASL--QD 88 (398)
T ss_pred CcccccccccC-C----cCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceec--cC
Confidence 45899999872 2 1234444444443 1 1245666 6899999999999987766543 346655 56
Q ss_pred chhHHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHHhhCC----CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE
Q 017967 159 SGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDAR----VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~~~G----~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
+|+.+.+.+. +.....+ ||.|++++|.|+.+...+...| ++++.+++. +++.+|++.+++.+. +++++
T Consensus 89 ~g~~~~~~~~-~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~---~~t~~ 162 (398)
T cd00613 89 EATAAAEAAG-LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVS---EEVAA 162 (398)
T ss_pred chHHHHHHHH-HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcC---CCeEE
Confidence 4443333332 2233445 9999999999999988887766 899888873 345789999999886 34667
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc---
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY--- 309 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~--- 309 (363)
+++++|+ |||.+. +.+++|.++|+++|+++|+|+++...... . .. ...+..+++.|++|.+ +|
T Consensus 163 viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~-~-----~~----~~~~~d~~~~s~~K~~-~p~g~ 228 (398)
T cd00613 163 LMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL-K-----PP----GEYGADIVVGNLQKTG-VPHGG 228 (398)
T ss_pred EEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC-C-----Ch----HHcCCCEEEeeccccC-CCCCC
Confidence 7778875 999983 45689999999999999999986432211 0 00 1124568899999998 56
Q ss_pred -cccceEEEEeeCChh
Q 017967 310 -AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 -G~RvG~i~~v~~~~~ 324 (363)
|+|+||+ +.+ ++
T Consensus 229 Ggp~~g~l--~~~-~~ 241 (398)
T cd00613 229 GGPGAGFF--AVK-KE 241 (398)
T ss_pred CCCceeEE--EEh-hh
Confidence 8999999 554 44
No 167
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.76 E-value=4.3e-17 Score=158.43 Aligned_cols=203 Identities=13% Similarity=0.008 Sum_probs=141.1
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g 177 (363)
|+..+++.+.+++.... .+| ...+..++++.+.+.+....+.. ..+.+++ +.+|+++++.+ +...+.+|
T Consensus 16 GP~~~~~~V~~a~~~~~-----~~~-~~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~--~~~gt~a~~~a--~~~~~~~G 84 (401)
T PLN02409 16 GPVNIPERVLRAMNRPN-----EDH-RSPAFPALTKELLEDVKYIFKTK-SGTPFIF--PTTGTGAWESA--LTNTLSPG 84 (401)
T ss_pred CCCCCCHHHHHHhcCCC-----CCC-CCHHHHHHHHHHHHHHHHHhCCC-CCCEEEE--eCCcHHHHHHH--HHhcCCCC
Confidence 55667888888864422 223 23456667766666655544432 1234555 78889998777 45557899
Q ss_pred CEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 178 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 178 d~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
|+|++++++|... ...++..|++++.++.+ .+.++|++.+++.+++.+ ++++++++++++||||.+++.+++.++
T Consensus 85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l 162 (401)
T PLN02409 85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESP--WGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKL 162 (401)
T ss_pred CEEEEeCCCchhHHHHHHHHHcCCceEEEECC--CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHH
Confidence 9999999988655 46778899999999974 345689999999998522 246788889999999999998888888
Q ss_pred HHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHH
Q 017967 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~ 328 (363)
++ |+++|+++|+|+++.- ..-+ .. .+...-.+++.|.+|.++.| .++||+ +.+ ++.+++
T Consensus 163 ~~-~~~~g~~~vvD~v~s~-g~~~-----id----~~~~~~D~~~~s~~K~l~~P-~G~G~l--~~~-~~~~~~ 221 (401)
T PLN02409 163 LD-CAQHPALLLVDGVSSI-GALD-----FR----MDEWGVDVALTGSQKALSLP-TGLGIV--CAS-PKALEA 221 (401)
T ss_pred Hh-hhccCcEEEEEccccc-CCcc-----cc----ccccCccEEEEcCccccCcC-CCccee--EEC-HHHHHH
Confidence 87 9999999999999652 2110 01 11112236667779999754 379999 665 554333
No 168
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.76 E-value=4.9e-17 Score=158.16 Aligned_cols=205 Identities=15% Similarity=0.048 Sum_probs=144.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCC---CC----CCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKE---YL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~---Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+++-|..|.. ..+++.+.++..+...... +.. +. ...+..++|+.+++++... ++++|++
T Consensus 18 ~~~yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~-----~~~~v~~- 85 (403)
T TIGR01979 18 PLVYLDSAAT------SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAA-----SDEEIVF- 85 (403)
T ss_pred ceEEEeCccc------cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE-
Confidence 4677776653 3456777777766553211 000 10 0124668999999987442 2468888
Q ss_pred eccchhHHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.|+++++.++...+. .+.+||.|+++++.|+. +...++..|++++.++.+ .++.+|++.+++.+. ++
T Consensus 86 -~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~---~~ 159 (403)
T TIGR01979 86 -TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLT---EK 159 (403)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhc---cC
Confidence 9999999988854332 24689999999998765 345556789999999984 456789999999886 35
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++++||||..++. ++|.++|+++|+++|+|++|...... ..+ ......+++.|++|.+|.+
T Consensus 160 ~~lv~~~~~~~~tG~~~~~---~~i~~~~~~~~~~~ivD~a~~~g~~~------~~~----~~~~~d~~~~s~~K~~gp~ 226 (403)
T TIGR01979 160 TKLVAITHVSNVLGTVNPV---EEIAKLAHQVGAKVLVDGAQAVPHMP------VDV----QALDCDFYVFSGHKMYGPT 226 (403)
T ss_pred CeEEEEEcccccccccCCH---HHHHHHHHHcCCEEEEEchhhcCccc------cCc----cccCCCEEEEecccccCCC
Confidence 7788889999999999985 56777799999999999998643211 011 1123458899999998866
Q ss_pred cccceEEEEeeCChh
Q 017967 310 AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G~RvG~i~~v~~~~~ 324 (363)
| +|++ +.. ++
T Consensus 227 G--~g~l--~~~-~~ 236 (403)
T TIGR01979 227 G--IGVL--YGK-EE 236 (403)
T ss_pred C--ceEE--EEc-hH
Confidence 6 7988 555 54
No 169
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.76 E-value=5.2e-17 Score=156.28 Aligned_cols=199 Identities=15% Similarity=0.063 Sum_probs=139.9
Q ss_pred CCCCCCccccHHHHHHHHHHHccCC-C-----CCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 94 RTEELQPYVLDVVKKAENLMLERGE-N-----KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 94 ~~~~~~~~~~~~v~~a~~~~~~~~~-~-----~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
.|..+..++++.+.++..+.+.... + +.+.+ ..+..++|+.+++++... +++++++ |.|+++++.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~a~~ 75 (373)
T cd06453 3 LDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAP-----SPDEIIF--TRNTTEAIN 75 (373)
T ss_pred ccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCCHHHHHH
Confidence 3445556677788888766652210 0 01101 233567889999887432 2468877 999999999
Q ss_pred HHHHHHHHhC---CCCEEEEcCCCCcch----HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 166 LAAALIERYF---PGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 166 l~~~l~~~~~---~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
++. ..+.. +||+|++++++|+.. ...++..|++++.++++ +++.+|++.+++.+.+ ++.+++++++
T Consensus 76 ~~~--~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~---~~~~v~~~~~ 148 (373)
T cd06453 76 LVA--YGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTE---RTKLVAVTHV 148 (373)
T ss_pred HHH--HHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcC---CceEEEEeCc
Confidence 884 34444 899999999999874 33455789999999984 4577999999999873 5668888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~ 318 (363)
+||||.+.+. ++|+++|+++|+++++|++|...... ..+. +. ...+++.|+.|.++. .++||+
T Consensus 149 ~~~tG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~------~~~~---~~-~~d~~~~s~~K~~~~--~g~g~~-- 211 (373)
T cd06453 149 SNVLGTINPV---KEIGEIAHEAGVPVLVDGAQSAGHMP------VDVQ---DL-GCDFLAFSGHKMLGP--TGIGVL-- 211 (373)
T ss_pred ccccCCcCCH---HHHHHHHHHcCCEEEEEhhhhcCcee------eecc---cc-CCCEEEeccccccCC--CCcEEE--
Confidence 9999999885 56777799999999999997643211 0111 11 224566788999984 668998
Q ss_pred eeCChh
Q 017967 319 VCSSSD 324 (363)
Q Consensus 319 v~~~~~ 324 (363)
+++ ++
T Consensus 212 ~~~-~~ 216 (373)
T cd06453 212 YGK-EE 216 (373)
T ss_pred EEc-hH
Confidence 665 55
No 170
>PRK07179 hypothetical protein; Provisional
Probab=99.76 E-value=1.8e-16 Score=154.50 Aligned_cols=216 Identities=15% Similarity=0.063 Sum_probs=144.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
..++++...|.+...+|.+.+.+.+++.+..... ....+.......+|.+.+|+++.. +.+++ +.||+
T Consensus 55 ~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~--~~sG~ 124 (407)
T PRK07179 55 DAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--------ESCLL--CQSGW 124 (407)
T ss_pred cEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--------CcEEE--ECCHH
Confidence 6789988888766555544445544443321111 111122223567888999999632 35555 89999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+|..++ +..+..+||.|++..+.+......++..|++++.++ ..|++.+++.+++ .++.++++++++||
T Consensus 125 ~An~~~--l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~--~~~~lV~v~~v~n~ 193 (407)
T PRK07179 125 AANVGL--LQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-------HNDVDHLRRQIER--HGPGIIVVDSVYST 193 (407)
T ss_pred HHHHHH--HHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEec-------CCCHHHHHHHHHh--cCCeEEEECCCCCC
Confidence 998887 444566899999999998888777778888776654 2589999999874 23567888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe-EEEEEcCccccccccccceEEEEee
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
||.+++. ++|.++|+++|+++|+||+|.....+. .. ...+..+ +..+. .+++.|+||.+| .|+||+ ++
T Consensus 194 tG~i~pl---~~I~~l~~~~~~~livDea~~~g~~g~-~g-~g~~~~~-~~~~~vdi~~~S~sK~~g---~~~G~l--~~ 262 (407)
T PRK07179 194 TGTIAPL---ADIVDIAEEFGCVLVVDESHSLGTHGP-QG-AGLVAEL-GLTSRVHFITASLAKAFA---GRAGII--TC 262 (407)
T ss_pred CCccccH---HHHHHHHHHcCCEEEEECcccccCcCC-CC-CchHHhc-CCCCCCCEEEeechHhhh---ccCeEE--Ee
Confidence 9999985 567777999999999999987433321 10 1111111 21123 488999999986 379999 66
Q ss_pred CChhHHHHHHHHHHhh
Q 017967 321 SSSDLAARVKSQLKRL 336 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~ 336 (363)
+ ++ +++.+...
T Consensus 263 ~-~~----~~~~~~~~ 273 (407)
T PRK07179 263 P-RE----LAEYVPFV 273 (407)
T ss_pred C-HH----HHHHHHHh
Confidence 5 55 44444433
No 171
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.75 E-value=5.2e-17 Score=159.10 Aligned_cols=205 Identities=16% Similarity=0.055 Sum_probs=143.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-C----CCCCC---CcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N----KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~----~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+.|..+.. ..+++.+.+++.+...... . ..|.. .....++|+++++++... ++++|++
T Consensus 32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~- 99 (424)
T PLN02855 32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAS-----TSREIVF- 99 (424)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE-
Confidence 4677776553 3456777777766553210 0 11111 122468899999997542 2478988
Q ss_pred eccchhHHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.|+|+++.++...+. .+.+||+|+++.+.|+. +...++..|++++.++.+ .++.+|++.+++.+++ +
T Consensus 100 -t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~ 173 (424)
T PLN02855 100 -TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT--PDEVLDVEQLKELLSE---K 173 (424)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHHhcc---C
Confidence 9999999998854332 35689999999997764 455667889999999984 2456899999999873 5
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++++||||..++.+ +|+++|+++|+++|+|++|..-. .. ..+ ......+++.|++|.+|.+
T Consensus 174 t~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~a~~~g~-~~-----~~~----~~~~~d~~~~s~~K~~gp~ 240 (424)
T PLN02855 174 TKLVATHHVSNVLGSILPVE---DIVHWAHAVGAKVLVDACQSVPH-MP-----VDV----QTLGADFLVASSHKMCGPT 240 (424)
T ss_pred ceEEEEeCccccccccCCHH---HHHHHHHHcCCEEEEEhhhhcCC-cC-----CCc----hhcCCCEEEeecccccCCC
Confidence 67888899999999999865 56777999999999999974211 10 111 1112346799999988755
Q ss_pred cccceEEEEeeCChh
Q 017967 310 AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G~RvG~i~~v~~~~~ 324 (363)
| +||+ +.. ++
T Consensus 241 G--~G~l--~~~-~~ 250 (424)
T PLN02855 241 G--IGFL--WGK-SD 250 (424)
T ss_pred c--cEEE--EEc-hh
Confidence 5 8999 655 44
No 172
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.75 E-value=1.4e-16 Score=153.05 Aligned_cols=198 Identities=17% Similarity=0.067 Sum_probs=136.0
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g 177 (363)
++..+.+.+++++.... ......|. .-..++|+.+++++... -+++.|++ +.+|+.+++.+ +..++.+|
T Consensus 12 gP~~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~~~----~~~~~i~~--~~~gt~~l~~~--~~~l~~~~ 80 (368)
T PRK13479 12 GPLTTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIATGE----EGYTCVPL--QGSGTFSVEAA--IGSLVPRD 80 (368)
T ss_pred CCCCCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhCCC----CCceEEEE--cCCcHHHHHHH--HHhccCCC
Confidence 44556677777754322 11111122 24678888888886532 11244656 99999999888 55566799
Q ss_pred CEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 178 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 178 d~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
|.|+++.++|.+. ...++..|++++.+++. .++.+|++.+++.+++.+ +.+++.+++++||||...+. ++|.
T Consensus 81 ~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~~---~~i~ 154 (368)
T PRK13479 81 GKVLVPDNGAYGARIAQIAEYLGIAHVVLDTG--EDEPPDAAEVEAALAADP-RITHVALVHCETTTGILNPL---DEIA 154 (368)
T ss_pred CeEEEEeCCchHHHHHHHHHHcCCcEEEEECC--CCCCCCHHHHHHHHHhCC-CCcEEEEEcccCccccccCH---HHHH
Confidence 9999999888766 36778999999999983 356799999999987533 34567789999999999875 5667
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc-ccccccceEEEEeeCChhHHH
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAA 327 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~~ 327 (363)
++|+++++++|+| +|+.+.... ..+ .+.+.+ +++.|++|.+ |.+| +||+ +++ ++.++
T Consensus 155 ~l~~~~~~~livD-a~~~~g~~~-----~~~---~~~~~d-~~v~s~~K~l~g~~G--~G~l--~~~-~~~~~ 212 (368)
T PRK13479 155 AVAKRHGKRLIVD-AMSSFGAIP-----IDI---AELGID-ALISSANKCIEGVPG--FGFV--IAR-RSELE 212 (368)
T ss_pred HHHHHcCCEEEEE-cccccCCcc-----ccc---cccCce-EEEecCccccccCCC--ceEE--EEC-HHHHH
Confidence 7799999999999 556654321 111 112223 6667999965 6677 5999 665 55333
No 173
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.75 E-value=1.5e-16 Score=153.12 Aligned_cols=191 Identities=14% Similarity=0.073 Sum_probs=131.8
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEE
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV 180 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~V 180 (363)
..+...+++.+.+..+. -++...-..++.+.+++++ + .+++++ |+||++|+.++. ..+ +.|||+|
T Consensus 9 ~~~~e~~a~~~~~~~~~--~~~~g~~~~~~e~~la~~~----g----~~~~v~--~~sgt~aL~~~l--~al~~~pGd~V 74 (376)
T TIGR02379 9 VTGQELEYIAEAISEGK--LSGDGPFSRRCETWLENRT----G----TKKALL--TPSCTAALEMAA--LLLDIQPGDEV 74 (376)
T ss_pred CCHHHHHHHHHHHHcCC--ccCCcHHHHHHHHHHHHHh----C----CCeEEE--eCCHHHHHHHHH--HHcCCCCcCEE
Confidence 34455666666554432 1211111244444555542 2 367877 999999998873 333 5799999
Q ss_pred EEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Q 017967 181 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (363)
Q Consensus 181 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~ 260 (363)
++++|+|..+...+...|++++.++++ ++++.+|++.++++++. ++++++ |+||||...+ +.+|.++|++
T Consensus 75 iv~~~t~~~~~~~~~~~G~~~v~vd~d-~~~~~~d~~~le~~i~~---~tk~Ii---p~~~~G~~~d---~~~I~~la~~ 144 (376)
T TIGR02379 75 IMPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIESAITH---RTKAIV---PVHYAGVACD---MDTIMALANK 144 (376)
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcCc---CceEEE---EeCCCCCccC---HHHHHHHHHH
Confidence 999999999999999999999999985 34578999999998873 455655 6789998876 4577778999
Q ss_pred cCCeEEEecCCCCCc-CCCCCCchhHHHHHHhcCCeEEEEEcC----ccccccccccceEEEEeeCChhHHHHHHH
Q 017967 261 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY----SKNLGLYAERIGAMNVVCSSSDLAARVKS 331 (363)
Q Consensus 261 ~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~----SK~~~l~G~RvG~i~~v~~~~~~~~~~~~ 331 (363)
+|++||+|+++.... +++. .. .....+.+| +|.+. +|.|.|++ ++++++..+++..
T Consensus 145 ~~i~vIeDaa~~~g~~~~~~-----~~-------g~~~~~~~fSf~~~K~l~-~g~~gG~v--~~~~~~~~~~~~~ 205 (376)
T TIGR02379 145 HQLFVIEDAAQGVMSTYKGR-----AL-------GSIGHLGTFSFHETKNYT-SGGEGGAL--LINDQAFIERAEI 205 (376)
T ss_pred CCCEEEEECccccCCccCCc-----cc-------CCCCCEEEEeCCCCCcCc-ccCCceEE--EECCHHHHHHHHH
Confidence 999999999987654 3321 11 111123333 48896 78889999 8888885555443
No 174
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.75 E-value=2.1e-16 Score=152.93 Aligned_cols=211 Identities=13% Similarity=-0.015 Sum_probs=149.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-------CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
.+|||.--+- + .++++.+.+++.+...... ...+.......++++.+|+++.. +++.+
T Consensus 19 ~~~~~~~~~~----~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--------~~~~~-- 83 (387)
T PRK09331 19 EFINLDPIQR----G-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--------DEARV-- 83 (387)
T ss_pred cccccChhhc----C-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--------CcEEE--
Confidence 5777764331 1 2356777777776652211 11222234578999999999632 35666
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC----CCCcEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFI 232 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~~ 232 (363)
++|+++++.++ +..++.+||+|+++.++|......++..|++++.++...++++.+|++.+++.+++. .+++++
T Consensus 84 ~~g~t~a~~~a--l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~l 161 (387)
T PRK09331 84 THGAREGKFAV--MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPAL 161 (387)
T ss_pred eCCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEE
Confidence 89999998877 555578999999999998777777889999999998732346789999999998742 124678
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R 312 (363)
+++++|+||||...+ +++|+++|+++|+++++|++|..-... . .... . ...+++.|++|.++ .+.|
T Consensus 162 V~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~~---~---~~~~---~-g~D~~~~s~~K~l~-~~~~ 227 (387)
T PRK09331 162 ALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRMP---V---DGKK---L-GADFIVGSGHKSMA-ASAP 227 (387)
T ss_pred EEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCcC---C---CHHH---c-CCCEEEeeCccccc-CCCC
Confidence 888999999997754 667778899999999999998642211 0 1111 1 23577999999998 5669
Q ss_pred ceEEEEeeCChhHHHH
Q 017967 313 IGAMNVVCSSSDLAAR 328 (363)
Q Consensus 313 vG~i~~v~~~~~~~~~ 328 (363)
+||+ +++ ++.+++
T Consensus 228 ~G~l--~~~-~~~i~~ 240 (387)
T PRK09331 228 SGVL--ATT-EEYADK 240 (387)
T ss_pred EEEE--EEC-HHHHhh
Confidence 9999 654 663333
No 175
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.74 E-value=2.9e-16 Score=150.57 Aligned_cols=198 Identities=18% Similarity=0.105 Sum_probs=141.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||.+ |.. +.-|-.++++.+.+++.+..+. |. +..++++++.+++...++. +++++ |+|+|.|
T Consensus 9 ~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~----~~~~~--~~g~t~a 72 (363)
T TIGR01437 9 KVINAS-GKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGV----EDAVI--VSSASAG 72 (363)
T ss_pred eEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCC----CeEEE--EcCHHHH
Confidence 566655 443 4456667889999998877532 32 3456666666665544432 46766 9999999
Q ss_pred HHHHHHHHHHhCCCC---------------EEEEcCCCCcch----HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 164 LRLAAALIERYFPGA---------------KVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 164 l~l~~~l~~~~~~gd---------------~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
+.++ +..++.+|| .|+++.|.|..| ...+...|++++.++. ++.+|++.++++++
T Consensus 73 l~~a--l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~ 146 (363)
T TIGR01437 73 IAQS--VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAIT 146 (363)
T ss_pred HHHH--HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcC
Confidence 9988 555577887 999999888766 4677789999999876 34699999999997
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 304 (363)
+ +...++++++||||+|.+.+.+ +|+++|+++|+++|+|++|.. . ... +...+ ..+++.|++|
T Consensus 147 ~--~t~ai~~v~~~~~~~g~~~~~~---~i~~~a~~~gi~vivD~a~~~---~-----~~~---~~~~g-~D~~~~S~~K 209 (363)
T TIGR01437 147 E--KTAAILYIKSHHCVQKSMLSVE---DAAQVAQEHNLPLIVDAAAEE---D-----LQK---YYRLG-ADLVIYSGAK 209 (363)
T ss_pred h--hceEEEEEecCCCCcCCcCCHH---HHHHHHHHcCCeEEEECCCCC---c-----hHH---HHHcC-CCEEEEeCCc
Confidence 4 3333555688999999998865 567789999999999999861 1 111 11222 3567799999
Q ss_pred ccccccccceEEEEeeCChhH
Q 017967 305 NLGLYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 305 ~~~l~G~RvG~i~~v~~~~~~ 325 (363)
.+ +|+|.|++ +.+ ++.
T Consensus 210 ~l--~gp~~G~l--~~~-~~~ 225 (363)
T TIGR01437 210 AI--EGPTSGLV--LGK-KKY 225 (363)
T ss_pred cc--CCCceEEE--EEc-HHH
Confidence 76 58899998 654 553
No 176
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.74 E-value=6.2e-17 Score=150.87 Aligned_cols=169 Identities=16% Similarity=0.057 Sum_probs=127.0
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
|..-..++++.+|+++.. ++-+++ ++|+++++..+ +...+.|||+|+++.|+|......+...|++++.
T Consensus 57 ~~g~i~~~~~~~A~~~ga-------~~~~~~--~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~ 125 (294)
T cd00615 57 PTGPIKEAQELAARAFGA-------KHTFFL--VNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVY 125 (294)
T ss_pred CChHHHHHHHHHHHHhCC-------CCEEEE--cCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEE
Confidence 444478899999998643 234444 89999998777 5566789999999999999999899999999988
Q ss_pred EecccCCC----CCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCC-cCCC
Q 017967 204 YRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF-ASGS 278 (363)
Q Consensus 204 v~~~~~~~----~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~-~~~~ 278 (363)
++.....+ .++|++.+++++++.+ +++++++++| ||||.+++ +++|+++|+++|+++|+||+|... .+.+
T Consensus 126 v~~~~~~~~~~~~~i~~~~l~~~l~~~~-~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~ 200 (294)
T cd00615 126 LKPERNPYYGIAGGIPPETFKKALIEHP-DAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHP 200 (294)
T ss_pred ecCccCcccCcCCCCCHHHHHHHHHhCC-CceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCc
Confidence 87643222 3789999999997533 4667777888 79999986 567888899999999999998753 3322
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
. . +.. .......+++.|++|.+ +|+|.|++
T Consensus 201 ~---~-~~~--~~~~~~div~~S~hK~l--~g~~~~~~ 230 (294)
T cd00615 201 I---L-PSS--AAMAGADIVVQSTHKTL--PALTQGSM 230 (294)
T ss_pred c---c-Ccc--hhhcCCcEEEEchhccc--chHhHHHH
Confidence 1 0 111 11235679999999975 68888776
No 177
>PRK05939 hypothetical protein; Provisional
Probab=99.74 E-value=3.7e-16 Score=151.22 Aligned_cols=151 Identities=16% Similarity=0.145 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---HHhhCCCCeEEEe
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYR 205 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~ 205 (363)
.+|.+++|++.... ..+ + +.+|++|+..+ +..++.+||+|+++++.|+.+.. .++..|++++.++
T Consensus 50 ~~lE~~la~leg~~-------~~v-~--~ssG~~Ai~~~--l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~ 117 (397)
T PRK05939 50 AALEAKITKMEGGV-------GTV-C--FATGMAAIAAV--FLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVD 117 (397)
T ss_pred HHHHHHHHHHhCCC-------eEE-E--eCCHHHHHHHH--HHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEEC
Confidence 48999999985332 333 3 57779998877 55567899999999999976543 4567899998887
Q ss_pred cccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCC-cCCCCCCchh
Q 017967 206 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF-ASGSLDNDAS 284 (363)
Q Consensus 206 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~-~~~~~~~~~~ 284 (363)
. .|++.+++.++ ++++++++++|+||||.+ .++++|+++|+++|+++|+|++|... .++.
T Consensus 118 ~-------~d~e~l~~~l~---~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~~~~------ 178 (397)
T PRK05939 118 A-------TDVQNVAAAIR---PNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWLFRP------ 178 (397)
T ss_pred C-------CCHHHHHHhCC---CCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccccCc------
Confidence 5 37899999886 356788889999999987 57888999999999999999998532 2211
Q ss_pred HHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 285 SVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 285 ~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
......+++.|+||.++..|.++|++
T Consensus 179 ------~~~gaDivv~S~sK~~~g~g~~igg~ 204 (397)
T PRK05939 179 ------KDVGASLVINSLSKYIAGHGNALGGA 204 (397)
T ss_pred ------cccCCEEEEecCeecccCCCCeEEEE
Confidence 01135689999999999899999998
No 178
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=1.9e-16 Score=152.39 Aligned_cols=196 Identities=14% Similarity=0.104 Sum_probs=141.5
Q ss_pred CCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH---
Q 017967 120 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--- 194 (363)
Q Consensus 120 ~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~--- 194 (363)
+.|.. ..+...|++++|++..+ +++++ +.||++|+..+ +..++.+||+|++++|.|.++...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~--------~~~~~--~~sG~~Ai~~~--l~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGG--------AGTAL--YPSGAAAISNA--LLSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 44655 44567999999998522 35666 99999998887 5566889999999999998887644
Q ss_pred -hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 195 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 195 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
...|+++..++. .+.+.++++++ ++++++++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 121 l~~~Gi~v~~v~~-------~~~e~l~~~l~---~~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP-------MIGEGIRELIR---PNTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC-------CCHHHHHHhcC---cCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 467888776653 14577888776 357788899999999765 6788999999999999999999975
Q ss_pred CcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHH
Q 017967 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQ 352 (363)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~ 352 (363)
...-. +. + ..-.+++.|.+|.++ -.+...|++ +.+++. .+.+.........+.+++...++
T Consensus 188 p~~~~------Pl----~-~GaDivv~S~tK~l~Gh~d~~~G~~---~~~~~~----~~~l~~~~~~~G~~~~p~~a~l~ 249 (394)
T PRK09028 188 PINSR------PF----E-MGVDISIQAATKYIVGHSDVMLGTA---TANEKH----WDQLREHSYLMGQCTSPDDVYLA 249 (394)
T ss_pred cccCC------cc----c-cCceEEEEeCCeEecCCCCEEEEEE---ECCHHH----HHHHHHHHHhcCCCCCHHHHHHH
Confidence 43211 11 1 134588999999994 345666765 445653 33344333445668888888888
Q ss_pred hccccc
Q 017967 353 LSSMNG 358 (363)
Q Consensus 353 ~~~l~~ 358 (363)
.+.|+.
T Consensus 250 ~rgl~T 255 (394)
T PRK09028 250 MRGLRT 255 (394)
T ss_pred HcccCc
Confidence 776653
No 179
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.74 E-value=2.1e-16 Score=151.19 Aligned_cols=196 Identities=15% Similarity=0.084 Sum_probs=134.7
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCCCcc--hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLPIEG--LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G--~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~ 175 (363)
+++.+++.+.+++.+... .+.| +... ..++++.+++++... .++.+++ +.||++++.++ +..++.
T Consensus 6 ~~~~~~~~v~~a~~~~~~---~~~~-~~~~~~~~~~~~~la~~~g~~-----~~~~~~~--~~~~t~al~~~--~~~~~~ 72 (356)
T cd06451 6 GPSNVPPRVLKAMNRPML---GHRS-PEFLALMDEILEGLRYVFQTE-----NGLTFLL--SGSGTGAMEAA--LSNLLE 72 (356)
T ss_pred CCcCCCHHHHHHhCCCcc---CCCC-HHHHHHHHHHHHHHHHHhcCC-----CCCEEEE--ecCcHHHHHHH--HHHhCC
Confidence 445667888887643221 1223 2222 457778888886431 1234556 88889998888 445567
Q ss_pred CCCEEEEcCCCCcc--hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHH
Q 017967 176 PGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~ 253 (363)
+||.|+++.++|.. +...++..|++++.++.+ .++.+|++.+++.+++ .++.++++++++||||..++.+ +
T Consensus 73 ~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~~~---~ 145 (356)
T cd06451 73 PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKP--WGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNPLE---G 145 (356)
T ss_pred CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecC--CCCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccCHH---H
Confidence 99999999987765 466778899999999984 3468999999999973 2456777789999999998755 5
Q ss_pred HHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHH
Q 017967 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (363)
Q Consensus 254 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~ 327 (363)
|.++|+++|+++++|+++. +.... ... ...+.+ +++.|++|.++. +.++||+ +.+ ++.++
T Consensus 146 i~~~a~~~~~~li~D~~~~-~g~~~-----~~~---~~~~~d-~~~~s~~K~l~~-p~g~G~l--~~~-~~~~~ 205 (356)
T cd06451 146 IGALAKKHDALLIVDAVSS-LGGEP-----FRM---DEWGVD-VAYTGSQKALGA-PPGLGPI--AFS-ERALE 205 (356)
T ss_pred HHHHHHhcCCEEEEeeehh-ccCcc-----ccc---cccCcc-EEEecCchhccC-CCCccee--EEC-HHHHH
Confidence 6677899999999999864 22110 111 112223 556788999984 4468999 665 55333
No 180
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.73 E-value=3.5e-16 Score=149.24 Aligned_cols=199 Identities=17% Similarity=0.123 Sum_probs=135.2
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g 177 (363)
++..+.+.+++++...... ....|. .-..++|+.+++++.... +...|++ +.||++++..+ +..++.+|
T Consensus 6 ~p~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~~~~----~~~~i~~--~~~gt~~l~~~--~~~~~~~~ 74 (355)
T TIGR03301 6 GPLSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAGGDD----NHTCVLL--QGSGTFAVEAT--IGSLVPRD 74 (355)
T ss_pred CCCCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhcCCC----CCcEEEE--eCCcHHHHHHH--HHhccCCC
Confidence 4455778888887662211 111232 335678888888864431 1124555 89999998888 44556678
Q ss_pred CEEEEcCCC-Ccc-hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 178 AKVLISSPT-WGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 178 d~Vlv~~P~-y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
|+|++..+. |+. +...++..|.+++.++.+ +++.+|++.+++.+++++ +.+++++++++||||...+ +++|+
T Consensus 75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~~G~~~~---~~~i~ 148 (355)
T TIGR03301 75 GKLLVLINGAYGERLAKICEYLGIPHTDLNFS--EYEPPDLNRIEEALAADP-DITHVATVHHETTTGILNP---LEAIA 148 (355)
T ss_pred CeEEEECCCchhhHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHHhCC-CceEEEEEecCCcccchhH---HHHHH
Confidence 887766655 443 456778899999999873 457899999999998643 3556777889999999876 67788
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc-ccccccceEEEEeeCChhHHHH
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAAR 328 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~~~ 328 (363)
++|+++++++|+|+++. +... ...+ ...+..+++.|++|.+ |.+| +||+ +++ ++.+++
T Consensus 149 ~l~~~~~~~livD~~~s-~g~~-----~~~~----~~~~~d~~~~s~~K~l~~~~G--~g~~--~~~-~~~~~~ 207 (355)
T TIGR03301 149 KVARSHGAVLIVDAMSS-FGAI-----PIDI----EELDVDALIASANKCLEGVPG--FGFV--IAR-RDLLEA 207 (355)
T ss_pred HHHHHcCCEEEEEeccc-cCCc-----ccch----hhcCccEEEecCCcccccCCc--eeEE--EEC-HHHHHH
Confidence 88999999999998643 3211 1122 1224457789999986 5555 6999 665 664443
No 181
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.73 E-value=9.1e-17 Score=155.25 Aligned_cols=199 Identities=12% Similarity=0.067 Sum_probs=139.0
Q ss_pred cCCCCCCccccHHHHHHHHHHHcc-----CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHH
Q 017967 93 YRTEELQPYVLDVVKKAENLMLER-----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 167 (363)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~-----~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~ 167 (363)
|.|..+.+++++.+.+++.+.... ...+.| +..+...+++++++++.... . .++++|++ |+|+++++.++
T Consensus 2 yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~~-~-~~~~~i~~--t~g~teal~~~ 76 (382)
T TIGR03403 2 YLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGIN-A-RDLDDIII--TSCATESNNWV 76 (382)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHcC-c-CCCCeEEE--eCCHHHHHHHH
Confidence 345556667778888888776632 111223 24567788888888864332 1 24689988 99999999988
Q ss_pred HHHHHH---hCC-CCEEEEcCCCCcchHH---HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 168 AALIER---YFP-GAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 168 ~~l~~~---~~~-gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
...+.. ..+ +++|+++.+.|+.+.. .++..|++++.+|++ +++.+|++.+++.+++ +++++++++|||
T Consensus 77 ~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~l~~~i~~---~t~lv~~~~~~n 151 (382)
T TIGR03403 77 LKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQVREAITE---KTALVSVMWANN 151 (382)
T ss_pred HHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHHHHHhccc---CCeEEEEEcccC
Confidence 443211 145 4789999866655544 456789999999984 3467899999998873 467888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
|||..++.+ +|.++|+++|+++++|+++..-... . .+ .+.+.+ +++.|++|.+|.+|+ |++
T Consensus 152 ~tG~~~~~~---~I~~la~~~g~~~ivD~a~~~g~~~-~-----~~---~~~~~D-~~~~s~~K~~gp~G~--g~l 212 (382)
T TIGR03403 152 ETGMIFPIK---EIGEICKERGVLFHTDAVQAIGKIP-V-----DV---QKAGVD-FLSFSAHKFHGPKGV--GGL 212 (382)
T ss_pred CCccccCHH---HHHHHHHHcCCEEEEechhhcCCCc-c-----Cc---cccCCC-EEEEcchhhCCCCce--EEE
Confidence 999999865 6677799999999999995522110 0 11 122233 788999999887784 777
No 182
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.73 E-value=3.6e-16 Score=150.85 Aligned_cols=190 Identities=18% Similarity=0.125 Sum_probs=135.8
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEE
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVL 181 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vl 181 (363)
.+.-.+++.+.+..+. . | ......+|++++|+++.. ++++. +.|||+|+.++ +..+ +.+||+|+
T Consensus 13 ~~~e~~~~~~~l~~~~-~-~-~g~~~~~le~~la~~~g~--------~~~v~--~~sgt~al~la--l~al~~~~Gd~Vi 77 (379)
T PRK11658 13 GDEELAAVKEVLRSGW-I-T-TGPKNQALEQAFCQLTGN--------QHAIA--VSSATAGMHIT--LMALGIGPGDEVI 77 (379)
T ss_pred CHHHHHHHHHHHHcCC-c-c-CCHhHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEEE
Confidence 3444555555554432 2 2 344678999999999743 34555 89999999988 4444 57999999
Q ss_pred EcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 182 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
+++|+|..+...+...|++++.++++ .+++.+|++.+++.+++ ++++++ |+||+|...+ +++|.++|+++
T Consensus 78 v~~~~~~~~~~~~~~~G~~~v~vd~~-~~~~~~d~~~l~~~i~~---~tkav~---~~~~~G~~~d---~~~i~~~a~~~ 147 (379)
T PRK11658 78 TPSLTWVSTLNMIVLLGATPVMVDVD-RDTLMVTPEAIEAAITP---RTKAII---PVHYAGAPAD---LDAIRAIGERY 147 (379)
T ss_pred ECCCcHHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhccc---CCeEEE---EeCCCCCcCC---HHHHHHHHHHc
Confidence 99999999999999999999999985 34577999999998873 455555 5678998765 56677889999
Q ss_pred CCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHH
Q 017967 262 NHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 262 ~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~ 330 (363)
|+++|+|+++. +..+.+. .+ ...+. .+.||++.-.+++.+.|++ ++.+++..+++.
T Consensus 148 gi~vi~D~a~a~g~~~~~~-----~~---g~~g~---~~~Sf~~~K~l~~g~GG~v--~~~~~~~~~~~~ 204 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGR-----HI---GARGT---AIFSFHAIKNITCAEGGLV--VTDDDELADRLR 204 (379)
T ss_pred CCeEEEECCCccCCeECCe-----ec---CCCCC---EEEeCCCCCcCcccCceEE--EECCHHHHHHHH
Confidence 99999999986 3333321 11 11122 4566665555567789988 777787555544
No 183
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=4.3e-16 Score=152.16 Aligned_cols=157 Identities=18% Similarity=0.140 Sum_probs=120.7
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~ 200 (363)
......|.+.+|++... +..++ +.+|++|+.++ +..++.+||+|+++.+.|+... ..++..|++
T Consensus 63 ~p~~~~Le~~lA~leg~--------~~al~--~~sG~~Ai~~a--l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 63 NPTTDVFEKRIAALEGG--------IGALA--VSSGQAAITYS--ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 44567899999999532 34555 79999998877 5666789999999999886543 445678999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
++.++. .|++.+++++++ +++++++++|+||||.+++. ++|.++|+++|+++|+|++|..-. .
T Consensus 131 v~~vd~-------~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~di---~~I~~la~~~gi~vIvD~t~a~~~-~--- 193 (431)
T PRK08248 131 VKFVDP-------SDPENFEAAITD---KTKALFAETIGNPKGDVLDI---EAVAAIAHEHGIPLIVDNTFASPY-L--- 193 (431)
T ss_pred EEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEeCCCCccc-c---
Confidence 999875 378999998863 46677778999999999975 467777999999999999976311 1
Q ss_pred CchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
..++ +. ...+++.|++|.+|.+|.++|+++
T Consensus 194 --~~pl----~~-gaDivv~S~tK~lgg~g~~~Gg~v 223 (431)
T PRK08248 194 --LRPI----EH-GADIVVHSATKFIGGHGTSIGGVI 223 (431)
T ss_pred --CChh----Hc-CCCEEEEcCccccCCCCCceEEEE
Confidence 1111 22 345788999999999999999983
No 184
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=8.1e-16 Score=148.04 Aligned_cols=190 Identities=17% Similarity=0.150 Sum_probs=130.8
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~ 199 (363)
......+|++.+|++... +..+ + +.+|++++.++ +..+.|||+|+++.|.|++... .+...|+
T Consensus 48 ~~p~~~~Le~~lA~l~g~-------~~~~-~--~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~ 114 (377)
T PRK07671 48 GNPTRAALEELIAVLEGG-------HAGF-A--FGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGI 114 (377)
T ss_pred CChHHHHHHHHHHHHhCC-------CceE-E--eCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCe
Confidence 344578899999999533 2333 3 56677787655 3457899999999999984433 3456799
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++++++ +++++++++|+||||.+. ++++|.++|+++|+++|+|++|.......
T Consensus 115 ~v~~v~~-------~d~~~l~~ai~~---~tklV~le~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~~- 180 (377)
T PRK07671 115 EHTFVDT-------SNLEEVEEAIRP---NTKAIYVETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQS- 180 (377)
T ss_pred EEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 9888864 378999998863 567888899999999876 46667777999999999999997543321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
++ +. ...+++.|+||.++-++ .-.|++ ++.+++ +.+.+...........+++...++.+.|
T Consensus 181 -----p~----~~-g~Divv~S~sK~l~G~~~~~~G~~--v~~~~~----l~~~~~~~~~~~g~~~~~~~a~l~~~~l 242 (377)
T PRK07671 181 -----PI----SL-GADIVLHSATKYLGGHSDVVAGLV--VVNSPE----LAEDLHFVQNSTGGILGPQDSWLLLRGL 242 (377)
T ss_pred -----hh----hh-CCeEEEecCcccccCCccceeEEE--EeCcHH----HHHHHHHHHHhhcCCCCHHHHHHHHcCc
Confidence 11 11 23588999999997444 235666 666666 4444444444334456666666655543
No 185
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.72 E-value=1.1e-16 Score=152.18 Aligned_cols=201 Identities=12% Similarity=-0.052 Sum_probs=143.7
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--C-----
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--F----- 175 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~----- 175 (363)
+..+.+.+........ ..|....+..++++++++++.+..+.+..+.++++ |.|||+|+.++...+... .
T Consensus 12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~ 88 (345)
T cd06450 12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLALLAARDRARKRLKAG 88 (345)
T ss_pred HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHHHHHHHHHhhhhhhcc
Confidence 4455555555554433 44888889999999999998766665434567877 999999998885443221 1
Q ss_pred ---C--CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEEEcCCCCCCCCCCC
Q 017967 176 ---P--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPT 247 (363)
Q Consensus 176 ---~--gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~i~~p~NPTG~~~s 247 (363)
+ ++.|+++.++|..+...++..|.+++.+++++ ++.+|++.|++.+.+ ...+++++++++|+||||...
T Consensus 89 ~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~- 165 (345)
T cd06450 89 GGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID- 165 (345)
T ss_pred cccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-
Confidence 2 34788899999999888888899999999843 458999999999974 112466778899999999974
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
++++|+++|+++|+++++|++|..+..... ..... ......-..+..|++|.++ ++.|+|++
T Consensus 166 --~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~---~~~~~-~~~~~~~d~~~~s~~K~l~-~p~g~g~~ 227 (345)
T cd06450 166 --PLEEIADLAEKYDLWLHVDAAYGGFLLPFP---EPRHL-DFGIERVDSISVDPHKYGL-VPLGCSAV 227 (345)
T ss_pred --CHHHHHHHHHHhCCeEEEechhhHHHhhCh---hhHHH-hcCccccCEEEEchhHhhC-CCcchHHH
Confidence 567788889999999999999987764311 00100 1111122345679999775 67888987
No 186
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=4.4e-16 Score=151.30 Aligned_cols=197 Identities=17% Similarity=0.124 Sum_probs=140.5
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~ 200 (363)
.....+|.+.+|++... ...+. +++|++|+.++ ++.++.+||+|+++.++|.+.... +...|++
T Consensus 60 nPtv~~lE~~la~leg~--------~~av~--~~SG~aAi~~a--l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~ 127 (432)
T PRK06702 60 NPTLAAFEQKLAELEGG--------VGAVA--TASGQAAIMLA--VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGID 127 (432)
T ss_pred CcHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCE
Confidence 34577899999999543 24555 89999999888 556688999999999999866665 6788999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
+..++. .+|++.+++++++ +++++++.+|+|||+.+.+ +++|+++|+++|+++|+|++|..-..-
T Consensus 128 v~~vd~------~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~~--- 192 (432)
T PRK06702 128 VTFFNP------NLTADEIVALAND---KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYLC--- 192 (432)
T ss_pred EEEECC------CCCHHHHHHhCCc---CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhhC---
Confidence 888854 4789999999973 4567777899999999887 677777899999999999998421110
Q ss_pred CchhHHHHHHhcCCeEEEEEcCcc-----ccccccccc-----eEEEEeeCChhHHH-----------------H-HHHH
Q 017967 281 NDASSVRLFATRGMELLVAQSYSK-----NLGLYAERI-----GAMNVVCSSSDLAA-----------------R-VKSQ 332 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK-----~~~l~G~Rv-----G~i~~v~~~~~~~~-----------------~-~~~~ 332 (363)
.+ ++. .-.|+++|+|| ..+++|.++ +|. .+++.+.++ . +.+.
T Consensus 193 ---~p----l~~-GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
T PRK06702 193 ---QA----FEH-GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWT--NGKYPELVEPDPSYHGVSYVQNFGAAAYIVKA 262 (432)
T ss_pred ---Ch----hhc-CCCEEEEccccccCCCcceeceEEEeCCCcccc--cccccccccccccccccchhhccchhhHHHHH
Confidence 01 122 23488999999 888888887 676 443333211 0 1111
Q ss_pred HHhhhccccCCCchHHHHHHhccccc
Q 017967 333 LKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 333 l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.....+....+.+++...++.+.|+.
T Consensus 263 ~~~~~~~~g~~~sp~~a~l~~rgL~T 288 (432)
T PRK06702 263 RVQLLRDYGNCMSPFNAYISNIGLET 288 (432)
T ss_pred HHHHHHHccCCCCHHHHHHHHhccCc
Confidence 11222344568889988888877764
No 187
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.71 E-value=1.8e-15 Score=147.45 Aligned_cols=241 Identities=14% Similarity=0.096 Sum_probs=146.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CC-----CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
...++|+...|..... .+.+.+++.+.+.. +. ...|.+.....+|++.+|+++. . ++.+++
T Consensus 46 ~~~~~~~s~dylgl~~----~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~------~~~~~~-- 112 (407)
T PRK09064 46 REVTVWCSNDYLGMGQ----HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-K------EAALVF-- 112 (407)
T ss_pred ceEEEEECCCCcCCCC----CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-C------CcEEEE--
Confidence 3688999887753322 34566665544422 11 0123345567889999999863 2 344443
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH 235 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i 235 (363)
.+|+++...+..++....+++.|+.....+......++..|+++..++. .|++.+++.++... ++++++++
T Consensus 113 -~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 184 (407)
T PRK09064 113 -TSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAF 184 (407)
T ss_pred -CcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 5566665554222222237777776666666665566667777655542 37788888886432 34678888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccce
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG 314 (363)
++++||+|...+ +++|.++|+++|+++|+||+|..-.++.. ...+....+. ....++++||||.||++| |
T Consensus 185 ~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~---g~g~~~~~~~~~~~div~~t~sKa~g~~G---G 255 (407)
T PRK09064 185 ESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR---GGGIAERDGLMDRIDIIEGTLAKAFGVMG---G 255 (407)
T ss_pred eCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC---CCChHHhcCCCCCCeEEEEecchhhhccC---c
Confidence 999999999887 56667779999999999999973222211 1111111121 234788999999999888 9
Q ss_pred EEEEeeCChhHHHHHHHHHHhhhccc--cCCCchHHHHHHhccccccc
Q 017967 315 AMNVVCSSSDLAARVKSQLKRLARPM--YSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 315 ~i~~v~~~~~~~~~~~~~l~~~~~~~--~~~~s~~~q~~~~~~l~~~~ 360 (363)
|+ +++ ++ +++.+....... ..+.++..+.++...|+..+
T Consensus 256 ~~--~~~-~~----~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~ 296 (407)
T PRK09064 256 YI--AGS-AA----LVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLK 296 (407)
T ss_pred eE--ecC-HH----HHHHHHHhCccccccCcCCHHHHHHHHHHHHHHh
Confidence 98 554 66 455554443322 22455566666655554433
No 188
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.71 E-value=1.1e-15 Score=147.20 Aligned_cols=195 Identities=15% Similarity=0.126 Sum_probs=135.6
Q ss_pred CCCCCC--cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----
Q 017967 120 KEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---- 193 (363)
Q Consensus 120 ~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---- 193 (363)
+.|... ....+|++.+++++.. +++++ +.+|+.++.++ +..+.+||+|+++.+.|..+...
T Consensus 39 ~~Y~r~~~p~~~~le~~la~l~g~--------~~~l~--~~sG~~al~~~---l~ll~~Gd~Vl~~~~~y~~~~~~~~~~ 105 (378)
T TIGR01329 39 YDYTRSGNPTRTALESLLAKLDKA--------DRAFA--FSSGMAALDVI---TRLLNNGDEIIAGDDLYGGTDRLLTQV 105 (378)
T ss_pred CccCCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHhCCCCEEEEcCCCchHHHHHHHHH
Confidence 445432 2356788888887532 35544 67788888766 33578999999999999877653
Q ss_pred HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 194 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
+...|++++.++. .|++.++++++ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 106 ~~~~G~~v~~vd~-------~d~~~le~~i~---~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 106 VPRSGVVVVHVDT-------TDLDKVKAALG---PKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred HHHcCcEEEEeCC-------CCHHHHHHhcC---cCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 4568999999875 27899998886 35778888999999999875 77788889999999999999743
Q ss_pred CcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHH
Q 017967 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQ 352 (363)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~ 352 (363)
.... .++ +. .-.+++.|++|.++- .|.+.|++ ++.++. +.+++..+......+.+++...++
T Consensus 173 ~~~~------~~l----~~-g~Di~v~S~tK~l~G~~~~~~G~v--~~~~~~----~~~~~~~~~~~~G~~~~~~~a~l~ 235 (378)
T TIGR01329 173 PLLC------NPL----EL-GADIVYHSATKFLAGHSDVMAGVL--AVKGEE----IAKKVYFLQNSTGSGLAPFDCWLL 235 (378)
T ss_pred cccC------Chh----hc-CCcEEEEecceeccCCccceeEEE--EeCcHH----HHHHHHHHHHhcCCcCCHHHHHHH
Confidence 3211 111 11 224889999998863 34789999 676565 334444333333445666666665
Q ss_pred hcccc
Q 017967 353 LSSMN 357 (363)
Q Consensus 353 ~~~l~ 357 (363)
...|+
T Consensus 236 ~~~l~ 240 (378)
T TIGR01329 236 LRGIK 240 (378)
T ss_pred HccCC
Confidence 55443
No 189
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=5.6e-16 Score=148.32 Aligned_cols=194 Identities=17% Similarity=0.150 Sum_probs=134.4
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
+.....+|++++|++.. .+++++ ++||++|+.++ + ..+.+||+|+++.+.|......+....-+. .
T Consensus 52 ~~p~~~~le~~lA~leg--------~~~~v~--~~sG~aAi~~~--l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 52 KNPTRAKLEETLAAIES--------ADYALA--TSSGMSAIVLA--F-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred CCccHHHHHHHHHHHhC--------CCeEEE--eCCHHHHHHHH--H-HHhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence 55668899999999962 257777 99999998887 3 456899999999999977665443211010 1
Q ss_pred EecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
+.. ++..|++.++++++ ++++++++++|+||||.+. ++++|+++|+++|+++|+|++|.......
T Consensus 118 ~~~----~~~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~~----- 182 (364)
T PRK07269 118 FHF----TYANTEEELIAAIE---EDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQR----- 182 (364)
T ss_pred EEE----EecCCHHHHHHhcC---cCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 111 23468899999887 3567888999999999876 67778888999999999999975433221
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+. +. .-.++++|++|.++-.|- =.||+ ++.+++..+++. ........+.+++...++...|+.
T Consensus 183 -pl----~~-gaDivv~S~tK~l~g~~d~~gG~v--~~~~~~l~~~~~----~~~~~~G~~~s~~~a~l~~~~L~t 246 (364)
T PRK07269 183 -PI----EL-GADIVLHSATKYLSGHNDVLAGVV--VTNDLELYEKLF----YNLNTTGAVLSPFDSYLLMRGLKT 246 (364)
T ss_pred -ch----hh-CCcEEEecCceeccCCCcccceEE--EeCcHHHHHHHH----HHHHHhCCCCCHHHHHHHHcCCCc
Confidence 11 11 223889999999974342 25777 666677444443 222233456788888888776653
No 190
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.1e-15 Score=147.88 Aligned_cols=189 Identities=16% Similarity=0.129 Sum_probs=131.4
Q ss_pred cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCCe
Q 017967 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW 201 (363)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~ 201 (363)
....+|++.+|++... +..++ +.+|+.++.++ + ..+.+||+|+++.|.|+... ..++..|+++
T Consensus 54 p~~~~le~~lA~l~g~-------~~~v~---~~sG~~ai~~~--l-~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v 120 (390)
T PRK08064 54 PTREALEDIIAELEGG-------TKGFA---FASGMAAISTA--F-LLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEH 120 (390)
T ss_pred hhHHHHHHHHHHHhCC-------CCeEE---ECCHHHHHHHH--H-HHhCCCCEEEEccCccchHHHHHHHHHHHcCCEE
Confidence 3467899999999633 23343 47778887766 3 35679999999999997443 4456789999
Q ss_pred EEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCC
Q 017967 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 281 (363)
+.++. .|++.+++.++ ++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|..+....
T Consensus 121 ~~v~~-------~d~~~l~~~l~---~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~--- 184 (390)
T PRK08064 121 TFVDM-------TNLEEVAQNIK---PNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK--- 184 (390)
T ss_pred EEECC-------CCHHHHHHhcC---CCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC---
Confidence 99876 26888988886 35678888999999999875 5566777999999999999987754321
Q ss_pred chhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 282 DASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 282 ~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. +. ...+++.|+||.++ -.|...|++ ++.+++ +.+.++..........++.....+...++
T Consensus 185 ---~~----~~-g~Divv~S~tK~~~G~~~~laG~~--v~~~~~----~~~~l~~~~~~~g~~~~~~~a~l~~~gl~ 247 (390)
T PRK08064 185 ---PL----DL-GADVVLHSATKFLAGHSDVLAGLA--VVKDEE----LAQKLYFLQNSFGAVLGVQDCWLVLRGLK 247 (390)
T ss_pred ---ch----hh-CCcEEEeecceeccCCccceeEEE--EeCCHH----HHHHHHHHHHhcCCCCCHHHHHHHHcccC
Confidence 11 11 23578999999985 234567877 566666 45555555444444555555555544443
No 191
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.71 E-value=1.4e-15 Score=148.01 Aligned_cols=238 Identities=12% Similarity=0.068 Sum_probs=145.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CC-----CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
..++|+...|..... .+.+.++..+..+. +. ...|.......+|++++|+++. . +..++ +
T Consensus 46 ~~~~~~sn~ylgl~~----~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g-~-------~~~l~--~ 111 (402)
T TIGR01821 46 DVTVWCSNDYLGMGQ----HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG-K-------ESALV--F 111 (402)
T ss_pred eEEEeEccCcCCCCC----CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC-C-------CeEEE--E
Confidence 588999888754333 34455555444422 11 0112233446789999999863 2 23444 5
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEc
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHG 236 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~ 236 (363)
.+|+++...+..++....+|+.|+.....+......++..|+++..++. .|++.+++.++... +++++++++
T Consensus 112 ~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e 184 (402)
T TIGR01821 112 TSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFE 184 (402)
T ss_pred CchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEc
Confidence 6678887766333222226777776666666555666777877655432 37788888776432 246788889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccceE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
+|+||||.+.+ +++|.++|+++|+++|+||+|..-.++.. ........+. ....+++++|||.||++| ||
T Consensus 185 ~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~---g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~ 255 (402)
T TIGR01821 185 SVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPR---GGGIAERDGLMHRIDIIEGTLAKAFGVVG---GY 255 (402)
T ss_pred CCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCC---CCccchhccCCCCCeEEEEechhhhccCC---ce
Confidence 99999999987 56677779999999999999873222211 0011111111 123688899999999888 88
Q ss_pred EEEeeCChhHHHHHHHHHHhhhccc--cCCCchHHHHHHhccccc
Q 017967 316 MNVVCSSSDLAARVKSQLKRLARPM--YSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 316 i~~v~~~~~~~~~~~~~l~~~~~~~--~~~~s~~~q~~~~~~l~~ 358 (363)
+ +++ ++ +++.+....... ..+.++..+.++...|+.
T Consensus 256 i--~~~-~~----~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~ 293 (402)
T TIGR01821 256 I--AAS-RK----LIDAIRSYAPGFIFTTSLPPAIAAGATASIRH 293 (402)
T ss_pred e--ecC-HH----HHHHHHHhCcCceecCcCCHHHHHHHHHHHHH
Confidence 8 554 66 455555443321 224566666666555544
No 192
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.70 E-value=6.1e-16 Score=131.16 Aligned_cols=164 Identities=21% Similarity=0.145 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCCCeEEEecc
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVPWSEYRYY 207 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~~ 207 (363)
.++++.+++++. .+.+++++ +.||++|+.++. ..+..+|++|+++.++|..+. ..++..|++++.++.+
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~--~~~~t~a~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVF--VPSGTGANEAAL--LALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEE--eCCcHHHHHHHH--HHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 578999999974 22567777 889999999983 444567999999999999998 7888999999999875
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHH
Q 017967 208 DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (363)
Q Consensus 208 ~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (363)
+......+.+.+++... .+++.++++++++||+|...+. ++|.++|+++|+++|+|++|..+...... .
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~ 141 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG------V 141 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc------c
Confidence 33222233335544332 3467788889999999998876 66777799999999999999988765310 0
Q ss_pred HHHhcCCeEEEEEcCccccccccccceEE
Q 017967 288 LFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 288 ~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
. .......+++.|++|.++. .|+|++
T Consensus 142 ~-~~~~~~d~~~~s~~K~~~~--~~~G~l 167 (170)
T cd01494 142 L-IPEGGADVVTFSLHKNLGG--EGGGVV 167 (170)
T ss_pred c-cccccCCEEEEEcccccCC--CceEEE
Confidence 0 1122456788999999984 789999
No 193
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=1.5e-15 Score=148.14 Aligned_cols=156 Identities=15% Similarity=0.098 Sum_probs=117.5
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~ 200 (363)
.....+|++++|++... +..++ +.+|++|+.++ +..++.+||+|+++.+.|.+....+. ..|++
T Consensus 57 ~pt~~~Le~~lA~l~g~--------~~~l~--~ssG~~Ai~~a--l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 57 NPTNDVLEQRVAALEGG--------VGALA--VASGMAAITYA--IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred CchHHHHHHHHHHHhCC--------CceeE--ehhHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 44567899999999532 23444 78999998888 45557899999999999986555543 24655
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
+..++. .|++.+++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 125 v~~~d~-------~d~e~le~ai~~---~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~~-- 189 (425)
T PRK06084 125 TRFAAH-------DDIAALEALIDE---RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLCR-- 189 (425)
T ss_pred EEEECC-------CCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 555542 489999998873 4567777999999999987 5677778999999999999987433211
Q ss_pred CchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
+. +. .-.+++.|++|.++.+|.++|.+
T Consensus 190 ----p~----~~-gaDivv~S~tK~l~G~g~~~gG~ 216 (425)
T PRK06084 190 ----PF----EH-GADIVVHSLTKYIGGHGTSIGGI 216 (425)
T ss_pred ----hh----hc-CCCEEEECchhcccccccceeEE
Confidence 11 11 23488999999999899999998
No 194
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=2.1e-15 Score=145.50 Aligned_cols=246 Identities=12% Similarity=0.046 Sum_probs=155.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-|. -.+.+.+++.+.++... +....+..++++++++++....+ .+++++ +.+|++|
T Consensus 30 ~~lD~~s~~~~~~lG~--~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~~~~--~~sG~~a 98 (377)
T PRK02936 30 TYLDFTSGIAVCNLGH--CHPTVTKAVQEQLDDIW---HVSNLFTNSLQEEVASLLAENSA----GDLVFF--CNSGAEA 98 (377)
T ss_pred EEEECCcchhhccCCC--CCHHHHHHHHHHHHhcc---ccccccCCHHHHHHHHHHHhcCC----CCEEEE--eCCcHHH
Confidence 6889887762111232 34556666655553311 11223456888999999866432 246767 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCCCCeE---EEecccCCCC--CCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS---EYRYYDPKTV--GLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~~~---~v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
.+.+..+.......++|++.++.|.+.... ....|.... ..|..+...+ ..|++.+++.+. ++..++++..
T Consensus 99 ~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~ii~e~ 175 (377)
T PRK02936 99 NEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN---EEVAAVMLEV 175 (377)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc---CCeEEEEEec
Confidence 998855432232336799999988755322 222221110 0111100000 127889998886 3466788888
Q ss_pred CCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 238 AHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 238 p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
+++++|.. .+.+.+++|.++|++||+++|+||+|.+|...+ .......+ ...+++ .+|||.++ +|+|+||+
T Consensus 176 i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~di---~t~sK~l~-~G~~ig~v 247 (377)
T PRK02936 176 VQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPDI---VTVAKGLG-NGIPVGAM 247 (377)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCcE---EEEccccc-CCCccEEE
Confidence 89999987 578999999999999999999999999886543 12222222 222333 36999999 99999999
Q ss_pred EEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 317 NVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 317 ~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++ ++ +.+.+........++.++++|.++...|+.
T Consensus 248 --~~~-~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 282 (377)
T PRK02936 248 --IGK-KE----LGTAFGPGSHGSTFGGNPLAMAAAKEVLQV 282 (377)
T ss_pred --EEc-HH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 665 66 555554433344457899999998877765
No 195
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.70 E-value=2.1e-15 Score=145.26 Aligned_cols=187 Identities=18% Similarity=0.096 Sum_probs=131.9
Q ss_pred ccHHHHHHHHHHHccCC-CC---CCCC----CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH
Q 017967 102 VLDVVKKAENLMLERGE-NK---EYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER 173 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~-~~---~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~ 173 (363)
+++.+.++..+...... .. .|.. ..+..++|+.+++++... ..++|++ |.|+++++.++ +...
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~al~~~--~~~~ 82 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAP-----SSAHVVF--TNNATTALNIA--LKGL 82 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE--eCCHHHHHHHH--HHhc
Confidence 45677777766553211 11 2322 256778999999997432 1357877 99999999887 4455
Q ss_pred hCCCCEEEEcCCCCcchHH----HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHH
Q 017967 174 YFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE 249 (363)
Q Consensus 174 ~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~ 249 (363)
+.+||+|++..+.|..+.. .++..|++++.++.+ .++.+|++.+++.+++ +++++++++||||||..++.+
T Consensus 83 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~---~~~~v~~~~~~n~tG~~~~~~ 157 (376)
T TIGR01977 83 LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKT---NTKLIVVSHASNVTGTILPIE 157 (376)
T ss_pred cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCC---CCeEEEEECCCCCccccCCHH
Confidence 6799999999999877643 445669999999874 3567899999998863 466788899999999999865
Q ss_pred HHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 250 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 250 ~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
+|.++|+++|+++|+|+++..-... . + + ....-.+++.|+.|.++.|. ..|.+
T Consensus 158 ---~i~~l~~~~~~~livD~a~~~g~~~-~--~---~----~~~~~D~~~~s~~K~l~~p~-g~g~l 210 (376)
T TIGR01977 158 ---EIGELAQENGIFFILDAAQTAGVIP-I--D---M----TELAIDMLAFTGHKGLLGPQ-GTGGL 210 (376)
T ss_pred ---HHHHHHHHcCCEEEEEhhhccCccC-C--C---c----hhcCCCEEEecccccccCCC-CceEE
Confidence 5677799999999999996432211 1 0 1 11233477889999876432 25666
No 196
>PRK14012 cysteine desulfurase; Provisional
Probab=99.69 E-value=1.5e-15 Score=147.96 Aligned_cols=201 Identities=15% Similarity=0.083 Sum_probs=138.5
Q ss_pred cCCCCCCccccHHHHHHHHHHHc--cCC-C-CC------CCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 93 YRTEELQPYVLDVVKKAENLMLE--RGE-N-KE------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~--~~~-~-~~------Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
|.|..+..++++.+.+++.+... ... + .. +.......++|+.+++++... ++++++ +.|+|+
T Consensus 6 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~------~~~v~~--~~g~t~ 77 (404)
T PRK14012 6 YLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD------PREIVF--TSGATE 77 (404)
T ss_pred EecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC------cCeEEE--eCCHHH
Confidence 44555556677888888766553 110 0 00 001123567788888886432 567877 999999
Q ss_pred HHHHHHHHHHH--hCCCCEEEEcCCCCcchHHHH---hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 163 SLRLAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 163 al~l~~~l~~~--~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
+++++...+.. ..+||.|++++++|+.+...+ +..|++++.++.+ +++.+|++.+++++++ +++++++++
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~~---~t~lv~~~~ 152 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMRD---DTILVSIMH 152 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcCC---CCEEEEEEC
Confidence 99988443321 368999999999998775544 3469999999874 4577899999999873 467888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
++||||..++ +++|.++|+++|+++|+|+++.. ..... .+ ....-.+++.|+.|.+| |+ ++|++
T Consensus 153 ~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~-g~~~~-----~~----~~~~~D~~~~s~~K~~g-p~-g~G~l- 216 (404)
T PRK14012 153 VNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV-GKVPI-----DL----SKLKVDLMSFSAHKIYG-PK-GIGAL- 216 (404)
T ss_pred cCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc-CCccc-----Cc----ccCCCCEEEEehhhccC-CC-ceEEE-
Confidence 9999999886 56677789999999999999643 21110 11 11123456779999887 54 68998
Q ss_pred EeeCCh
Q 017967 318 VVCSSS 323 (363)
Q Consensus 318 ~v~~~~ 323 (363)
+..++
T Consensus 217 -~~~~~ 221 (404)
T PRK14012 217 -YVRRK 221 (404)
T ss_pred -EEecC
Confidence 55533
No 197
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.69 E-value=2.5e-15 Score=144.79 Aligned_cols=189 Identities=14% Similarity=0.117 Sum_probs=127.8
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~ 200 (363)
......|+++++++.... .. ++ +.+|+.|+.++ +..+.|||+|++++|.|++... .+...|++
T Consensus 49 ~p~~~~Le~~la~l~g~~-------~a-l~--~~SG~~Al~~~---l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~ 115 (380)
T PRK06176 49 NPTRFALEELIADLEGGV-------KG-FA--FASGLAGIHAV---FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLS 115 (380)
T ss_pred ChhHHHHHHHHHHHhCCC-------CE-EE--ECCHHHHHHHH---HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeE
Confidence 334778999999985332 33 33 57778888765 3457899999999999976643 34567888
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
++.++. .|++.++++++ ++++++++.+|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 116 v~~vd~-------~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~-- 180 (380)
T PRK06176 116 CTIIDT-------SDLSQIKKAIK---PNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN-- 180 (380)
T ss_pred EEEcCC-------CCHHHHHHhcC---cCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC--
Confidence 877764 37899998886 35678888999999999876 5577778999999999999998654321
Q ss_pred CchhHHHHHHhcCCeEEEEEcCcccccccccc-ceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R-vG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+. +. .-.+++.|++|.++.+|-. .|++ ++.+++ +.++++..........++.....+...|
T Consensus 181 ----p~----~~-gaDivv~S~tK~l~g~~d~~gG~v--v~~~~~----~~~~~~~~~~~~G~~~~~~~~~l~~~gl 242 (380)
T PRK06176 181 ----PL----LL-GADIVVHSGTKYLGGHSDVVAGLV--TTNNEA----LAQEIAFFQNAIGGVLGPQDSWLLQRGI 242 (380)
T ss_pred ----cc----cc-CCCEEEecCceeccCCccceeeEE--EecHHH----HHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 11 11 2348899999999766643 4555 555555 3333333333223334455445544433
No 198
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.68 E-value=5.6e-15 Score=143.46 Aligned_cols=239 Identities=13% Similarity=0.132 Sum_probs=146.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-...-|+ -.|.+.+++.+.++... ...+.......+|.+.++++. + .+++.+ +.+|++
T Consensus 41 ~~lD~~~g~~~~~lGh--~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~SGse 108 (396)
T PRK04073 41 RYMDMLSAYSAVNQGH--RHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLP--MNTGAE 108 (396)
T ss_pred EEEEcCCCHHhccCCC--CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEE--cCChHH
Confidence 6888866642111222 23455555554443211 011112223345555555542 1 257777 999999
Q ss_pred HHHHHHHHHHHh-------CCC-CEEEEcCCCCcchH-HHHhhCCCC------------eEEEecccCCCCCCCHHHHHH
Q 017967 163 SLRLAAALIERY-------FPG-AKVLISSPTWGNHK-NIFNDARVP------------WSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 163 al~l~~~l~~~~-------~~g-d~Vlv~~P~y~~~~-~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~ 221 (363)
|++.+..+...+ .+| ++|+...-+|.+.. ..+...+-. +..++. .|++.+++
T Consensus 109 A~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 181 (396)
T PRK04073 109 AVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKA 181 (396)
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHH
Confidence 999886655443 134 67888777676543 222222211 122221 27888988
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHH-HHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~-~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
.+. ++++++++.+++||||..++.+ .+++|.++|+++|+++|+||+|.+|...+ ..... ...+..+++ .
T Consensus 182 ~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g---~~~~~-~~~~~~pdi---~ 251 (396)
T PRK04073 182 AIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG---KLFAC-DWDNVTPDM---Y 251 (396)
T ss_pred hcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc---HHHHh-hhcCCCCCE---E
Confidence 885 3467888888999999998765 59999999999999999999999886542 11111 111222333 3
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+|||.+|.+|+|+||+ +++ ++ +.+.+........++.++++|.++...|+.
T Consensus 252 ~~sK~lg~gg~~ig~~--~~~-~~----i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~ 302 (396)
T PRK04073 252 ILGKALGGGVFPISCV--AAN-RD----ILGVFTPGSHGSTFGGNPLACAVSIAALEV 302 (396)
T ss_pred EecccccCCCCcceEE--EEc-HH----HHhhhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 5799999888999999 665 66 555554433344456788888888777653
No 199
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.67 E-value=3.2e-15 Score=146.36 Aligned_cols=251 Identities=9% Similarity=0.023 Sum_probs=155.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-|+ -.+.+.+++.+.+.... +.+.+..+.+.. .++|+++....+.... +++.+ +.+|++|
T Consensus 42 ~~lD~~~g~~~~~lGh--~~~~i~~a~~~~~~~~~-~~~~~~~~~~~~-~~la~~l~~~~~~~~~-~~~~f--~~sGsea 114 (425)
T PRK08088 42 EYLDFAGGIAVLNTGH--LHPKVVAAVEAQLKKLS-HTCFQVLAYEPY-LELCEKMNQKVPGDFA-KKTLL--VTTGSEA 114 (425)
T ss_pred EEEEcCCchhhcCCCC--CCHHHHHHHHHHHhhCC-CccccccCCHHH-HHHHHHHHHhCCCCCC-CEEEE--eCCcHHH
Confidence 6888877643221222 24555566555553321 122222223333 3666666554332221 36666 7888898
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCe--------------EE--EecccCCCCCCC----HHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW--------------SE--YRYYDPKTVGLD----FEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~--------------~~--v~~~~~~~~~~d----~~~l~~~l 223 (363)
.+.+..+...+....+|+..+++|.+....+...+... .. +|.. . .+.+ ++.+++.+
T Consensus 115 ~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~--~~~~~~~~~~~l~~~l 191 (425)
T PRK08088 115 VENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCP-L--HGVSEDDAIASIERIF 191 (425)
T ss_pred HHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcc-c--cCccHHHHHHHHHHHH
Confidence 88886665555444567777999988865544332211 11 1211 0 1122 45688877
Q ss_pred Hc--C-CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 224 KA--A-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 224 ~~--~-~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
.. . .+...+++-+..+|+.....+.+.+++|.++|+++|+++|+||+|.++...+ ...++. ....+..+.
T Consensus 192 ~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g---~~~~~~----~~~~~pdi~ 264 (425)
T PRK08088 192 KNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG---TLFAME----QMGVAADLT 264 (425)
T ss_pred HhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhHHh----hcCCCCCEE
Confidence 52 1 2234455556678898889999999999999999999999999999876542 122221 112344579
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
||||.++ +|+|+||+ +++ ++ +++.+.........+.+++.|.++...|+..
T Consensus 265 s~sK~l~-~G~rig~v--~~~-~~----~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~ 315 (425)
T PRK08088 265 TFAKSIA-GGFPLAGV--TGR-AE----VMDAIAPGGLGGTYAGNPIACAAALAVLKVF 315 (425)
T ss_pred EEecccc-CCCcceee--Eec-HH----HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999998 99999999 765 55 5555555555566678999999998887754
No 200
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.67 E-value=6.7e-15 Score=141.22 Aligned_cols=195 Identities=14% Similarity=0.014 Sum_probs=132.5
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~ 175 (363)
|+..+.+.|.+++.... .++.+ ..-..++|+.+++++.... +++.|++ |.|||++++.+ +..++.
T Consensus 10 gp~~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~r~~la~l~~~~~----~~~~i~~--t~~~t~al~~~--~~~l~~ 76 (363)
T TIGR02326 10 GPLTTSRTVKEAMLFDW-----CTWDSDYNIVVEQIRQQLLALATAEE----GYTSVLL--QGSGTFAVEAV--IGSAVP 76 (363)
T ss_pred CCCCCCHHHHHHhCCCC-----CCCChHHHHHHHHHHHHHHHHhCCCC----CceEEEE--cCCCHHHHHHH--HHhcCC
Confidence 44556677777643321 11211 1124567888888864421 1236777 99999999988 455567
Q ss_pred CCCEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHH
Q 017967 176 PGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~ 253 (363)
+||.+++..+++.+. ...++..|++++.++++ +++.+|++.+++.++..+ +.+++.+++++||||..++. ++
T Consensus 77 ~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~i---~~ 150 (363)
T TIGR02326 77 KDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG--EVEPPDVVEVEAILAADP-AITHIALVHCETTTGILNPI---EA 150 (363)
T ss_pred CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHhhCC-CccEEEEEeecCCccccCcH---HH
Confidence 888888877766555 36678899999999983 467899999999988543 34567778899999999875 67
Q ss_pred HHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc-ccccccceEEEEeeCChhHH
Q 017967 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLA 326 (363)
Q Consensus 254 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~ 326 (363)
|.++|+++|+++|+|+++ .+... ...+.. .+..+++.|++|.+ |.+| +||+ +++ ++.+
T Consensus 151 I~~l~~~~g~~livD~~~-~~g~~-----~~~~~~----~~~D~~~~s~~K~l~~p~G--~G~l--~~~-~~~~ 209 (363)
T TIGR02326 151 VAKLAHRHGKVTIVDAMS-SFGGI-----PIDIAE----LHIDYLISSANKCIQGVPG--FGFV--IAR-QAEL 209 (363)
T ss_pred HHHHHHHcCCEEEEEccc-cccCc-----ccchhh----cCccEEEecCccccccCCc--ceEE--EEC-HHHH
Confidence 788899999999999764 33321 112211 12347789999987 4455 6999 665 5433
No 201
>PRK07505 hypothetical protein; Provisional
Probab=99.67 E-value=8.6e-15 Score=142.46 Aligned_cols=236 Identities=13% Similarity=0.065 Sum_probs=134.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-CCCCC----CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
..+|+....+.... -.+.+.+++.+.+.. + ..... .......++++.+++++.. +.++ +
T Consensus 47 ~~ld~~s~~~lgl~----~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--------~~~~---~ 111 (402)
T PRK07505 47 TFVNFVSCSYLGLD----THPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--------SVLT---F 111 (402)
T ss_pred eEEEeecCCccCCC----CCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--------CEEE---E
Confidence 68999765443112 234555555544422 1 00000 1223456777777777411 3333 3
Q ss_pred cchhHHHHHHHHHHHH-h-CCCC-EEEEcCCCCcchH---HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 158 LSGTGSLRLAAALIER-Y-FPGA-KVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~-~-~~gd-~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
.+|+.|.+.+..+... . .+|+ .|++.+..|.+.. ......+.+++.+|. .|++.+++.+.+ +++
T Consensus 112 ~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~---~~~ 181 (402)
T PRK07505 112 TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT---NKT 181 (402)
T ss_pred CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc---CCC
Confidence 5566676655333221 1 2233 3666665553321 112223456666664 478999998863 345
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-cCCeEEEEEcCcccccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~l~G 310 (363)
++++++|+||||.+++. ++|.++|+++++++|+||+|....++.. ........+.. ..+++++++||||.||.+|
T Consensus 182 ~~vl~~p~~~~G~~~~~---~~i~~l~~~~~~~li~DEa~~~~~~g~~-g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G 257 (402)
T PRK07505 182 VAYVADGVYSMGGIAPV---KELLRLQEKYGLFLYIDDAHGLSIYGKN-GEGYVRSELDYRLNERTIIAASLGKAFGASG 257 (402)
T ss_pred EEEEEecccccCCcCCH---HHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHHHcCCCCCCCeEEEEechhhhhccC
Confidence 77778999999999984 5666779999999999999854433311 11112222212 4578999999999999776
Q ss_pred ccceEEEEeeCChhHHHHHHHHHHhhhccc-cC-CCchHHHHHHhcccc
Q 017967 311 ERIGAMNVVCSSSDLAARVKSQLKRLARPM-YS-NPPPMLLGIQLSSMN 357 (363)
Q Consensus 311 ~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~-~~-~~s~~~q~~~~~~l~ 357 (363)
||+ ++++++ +++.+....... ++ +++.++..++...++
T Consensus 258 ---g~~--~~~~~~----~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 258 ---GVI--MLGDAE----QIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred ---eEE--EeCCHH----HHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 887 666677 455554443322 22 344556665555444
No 202
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.67 E-value=2.9e-15 Score=144.42 Aligned_cols=169 Identities=19% Similarity=0.171 Sum_probs=118.3
Q ss_pred HHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccC
Q 017967 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP 209 (363)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~ 209 (363)
.+++++.+++....+ .+++++ ++||++|+.++...+ .+.+||+|+++.|+|..+...+...|++++.++++ +
T Consensus 31 ~~~~~~e~~la~~~g----~~~~v~--~~sgt~al~~~l~~~-~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d-~ 102 (375)
T PRK11706 31 GFTRRCQQWLEQRFG----SAKVLL--TPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIR-P 102 (375)
T ss_pred HHHHHHHHHHHHHhC----CCeEEE--ECCHHHHHHHHHHHh-CCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC-C
Confidence 444555444433322 268877 999999988873221 25699999999999999999999999999999985 3
Q ss_pred CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcC-CCCCCchhHHHH
Q 017967 210 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS-GSLDNDASSVRL 288 (363)
Q Consensus 210 ~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~ 288 (363)
+++.+|++.+++.+++ ++++++++ ||||... ++++|.++|+++|+++|+|++|..... ++. ....
T Consensus 103 ~~~~~d~~~le~~i~~---~tk~i~~~---~~~G~~~---~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~-----~~g~ 168 (375)
T PRK11706 103 DTMNIDETLIEAAITP---KTRAIVPV---HYAGVAC---EMDTIMALAKKHNLFVVEDAAQGVMSTYKGR-----ALGT 168 (375)
T ss_pred CcCCcCHHHHHHhcCC---CCeEEEEe---CCCCCcc---CHHHHHHHHHHcCCEEEEECccccccccCCe-----eeec
Confidence 4578999999998873 34555543 5799775 456788889999999999999876652 211 1111
Q ss_pred HHhcCCeEEEEEcCc--cccccccccceEEEEeeCChhHHHHH
Q 017967 289 FATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 289 ~~~~~~~vi~~~S~S--K~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
+ ..+.+.||. |.++ +|.+.+++ +.+++..+++
T Consensus 169 ~-----~~~~~~Sf~~~K~l~-~g~gG~~~---~~~~~~~~~~ 202 (375)
T PRK11706 169 I-----GHIGCFSFHETKNYT-AGEGGALL---INDPALIERA 202 (375)
T ss_pred C-----cCEEEEeCCCCcccc-ccCCeEEE---ECCHHHHHHH
Confidence 1 122334443 9997 69887777 5567744433
No 203
>PLN02509 cystathionine beta-lyase
Probab=99.67 E-value=5.5e-15 Score=144.87 Aligned_cols=197 Identities=14% Similarity=0.140 Sum_probs=129.2
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----Hh
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FN 195 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~ 195 (363)
+.|... |.+ .++++.+++....+ .++.++ +++|++++.++ +.++.+||+|+++.|.|..+... +.
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l~ 193 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP 193 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHHH
Confidence 567544 543 34444444433322 245555 68888887655 34578999999999999988644 45
Q ss_pred hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 196 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
..|++++.++. .|++.++++++ ++++++++++|+||||.. .++++|+++|+++|+++|+|++|....
T Consensus 194 ~~G~~v~~vd~-------~d~e~l~~ai~---~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 194 RSGVVVKRVNT-------TNLDEVAAAIG---PQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HCCeEEEEeCC-------CCHHHHHHhCC---cCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccc
Confidence 78998887753 36888988886 356788889999999975 788899999999999999999975443
Q ss_pred CCCCCCchhHHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhc
Q 017967 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLS 354 (363)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~ 354 (363)
... +. .. .-.++++|++|.++-+|- =.|.+ ++.++. +.+.+..+........+++...++..
T Consensus 261 ~~~------pl----~~-gaDivv~S~tK~l~G~gdv~gG~v--~~~~~~----l~~~~~~~~~~~g~~l~p~~A~l~lr 323 (464)
T PLN02509 261 LSR------PL----EL-GADIVMHSATKFIAGHSDVMAGVL--AVKGEK----LAKEVYFLQNSEGSGLAPFDCWLCLR 323 (464)
T ss_pred cCC------hh----hc-CCcEEEecCcccccCCCccceeEE--EeccHH----HHHHHHHHHHhcCCCcCHHHHHHHHh
Confidence 221 11 11 235889999999875443 24555 444444 22332222222233456666666655
Q ss_pred ccc
Q 017967 355 SMN 357 (363)
Q Consensus 355 ~l~ 357 (363)
.|+
T Consensus 324 ~L~ 326 (464)
T PLN02509 324 GIK 326 (464)
T ss_pred hhh
Confidence 544
No 204
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.67 E-value=7.3e-15 Score=141.25 Aligned_cols=187 Identities=14% Similarity=0.027 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCCeEE
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSE 203 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~ 203 (363)
...|++++|++... +++++ +.||++|+.++ +..++.+||+|++++|.|...... ++..|+++..
T Consensus 52 ~~~lE~~lA~l~g~--------~~~~~--~~sG~~Ai~~a--l~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~ 119 (377)
T TIGR01324 52 HFALQDAMCELEGG--------AGCYL--YPSGLAAVTNS--ILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITY 119 (377)
T ss_pred HHHHHHHHHHHhCC--------CcEEE--ECcHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEE
Confidence 36899999998532 46766 89999998887 556688999999999999877653 3567888776
Q ss_pred EecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
++.. +.+.+++.++ ++++++++.+|+||||.. .++++|+++|+++|+++|+|++|..-....
T Consensus 120 ~d~~-------~~e~l~~~i~---~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~~----- 181 (377)
T TIGR01324 120 YDPL-------IGEDIATLIQ---PNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLFK----- 181 (377)
T ss_pred ECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC-----
Confidence 6431 2277888776 357788889999999765 678889999999999999999986533221
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccc-cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~-G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ .+. .-.++++|++|.++-. +...|++ ++ +++..+++.. .........++.....+.+.|+
T Consensus 182 -p----l~~-gaDivv~S~tK~l~G~~d~~gG~v--~~-~~~~~~~l~~----~~~~~G~~l~p~~a~~~~rgl~ 243 (377)
T TIGR01324 182 -P----LEH-GVDISIQAGTKYLVGHSDIMIGTV--VA-NARTWDQLRE----HSYLMGQMVDADDAYTTLRGLR 243 (377)
T ss_pred -c----ccc-CceEEEecCceeccCCCCceEEEE--Ee-CHHHHHHHHH----HHHHhCCCCCHHHHHHHHhhhh
Confidence 1 122 3347899999999633 4667877 44 4664444432 2223334556666555555443
No 205
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.67 E-value=4e-15 Score=142.26 Aligned_cols=197 Identities=17% Similarity=0.077 Sum_probs=132.7
Q ss_pred CCCCCccccHHHHHHHHHHHccCC--CCCCCCC------cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHH
Q 017967 95 TEELQPYVLDVVKKAENLMLERGE--NKEYLPI------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL 166 (363)
Q Consensus 95 ~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~------~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l 166 (363)
|..+..++++.+.++..+...... ...+... .-..++|+.+++++.. ++++|++ |.|+++++++
T Consensus 3 d~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~v~~--~~g~t~a~~~ 74 (353)
T TIGR03235 3 DHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGA------DTEEVIF--TSGATESNNL 74 (353)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCCHHHHHHH
Confidence 444555677888888876653211 0111111 1146788888888643 2578877 9999999988
Q ss_pred HHHHHHHh--CCC-CEEEEcCCCCcchH---HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 167 AAALIERY--FPG-AKVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 167 ~~~l~~~~--~~g-d~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+...+... .+| +.|++....|+.+. ..++..|++++.++.+ .++.+|++.+++.+++ +++++++++++|
T Consensus 75 ~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~lv~~~~~~n 149 (353)
T TIGR03235 75 AILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ESGRIDVDELADAIRP---DTLLVSIMHVNN 149 (353)
T ss_pred HHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhCCC---CCEEEEEEcccC
Confidence 74333221 356 77888876665543 3455679999999984 3577999999998863 467888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||..++ +++|.++|+++|+++++|+++.--... . .+ +...-.+++.|..|.+|.+| +|++ +.
T Consensus 150 ~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~~-~-----~~----~~~~~D~~~~s~~K~~gp~g--~g~l--~~ 212 (353)
T TIGR03235 150 ETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKIT-V-----DL----SADRIDLISCSGHKIYGPKG--IGAL--VI 212 (353)
T ss_pred CceeccC---HHHHHHHHHHcCCEEEEEchhhcCCcc-c-----cc----cccCCCEEEeehhhcCCCCc--eEEE--EE
Confidence 9999987 466777799999999999994422111 0 01 11123466678899887666 6888 55
Q ss_pred C
Q 017967 321 S 321 (363)
Q Consensus 321 ~ 321 (363)
.
T Consensus 213 ~ 213 (353)
T TIGR03235 213 R 213 (353)
T ss_pred c
Confidence 5
No 206
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.66 E-value=7e-15 Score=143.11 Aligned_cols=236 Identities=16% Similarity=0.121 Sum_probs=143.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-...-|. -.+.+.+++.+.++... ...+....-..+|.+.++++. + .+++.+ +.+|++
T Consensus 41 ~~iD~~~~~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~sGse 108 (403)
T PRK05093 41 EYIDFAGGIAVTALGH--CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT----F----AERVFF--ANSGAE 108 (403)
T ss_pred EEEEcCcCHHhccCCC--CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC----C----CCEEEE--eCchHH
Confidence 6889876621111222 24455555555443211 011111111234555555542 1 257777 899999
Q ss_pred HHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCC------------CCeEEEecccCCCCCCCHHHHHHHH
Q 017967 163 SLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 163 al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
|.+.+..+..... .+ ++|+..+-+|.+... .....| .+++.++. .|++.+++.+
T Consensus 109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 181 (403)
T PRK05093 109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVI 181 (403)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHh
Confidence 9998866544331 23 567777777766432 211111 11222221 2788998888
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCC--CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~--s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
. ++++++++ +|.||+|.++ +.+.+++|.++|++||+++|+||+|.++.+.+. ..+...+ +..++ +.|
T Consensus 182 ~---~~~aaiii-ep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~-~~~pd---i~s 250 (403)
T PRK05093 182 D---DHTCAVVV-EPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD---LFAYMHY-GVTPD---ILT 250 (403)
T ss_pred c---CCeEEEEE-ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc---chhhhhc-CCCCC---EEE
Confidence 5 23555554 4899998876 899999999999999999999999999866531 2221111 11122 568
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|||.++ +|+|+||+ +++ ++ +++.+........++.+++.|.++...|+
T Consensus 251 ~sK~l~-~G~rig~v--v~~-~~----i~~~l~~~~~~~t~~~~~~~~~aa~a~L~ 298 (403)
T PRK05093 251 SAKALG-GGFPIGAM--LTT-AE----IASHFKVGTHGSTYGGNPLACAVAEAVFD 298 (403)
T ss_pred eccccc-CCcceEEE--EEc-HH----HHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999 99999999 776 55 55655543344455788888988877543
No 207
>PRK05968 hypothetical protein; Provisional
Probab=99.66 E-value=1e-14 Score=141.10 Aligned_cols=191 Identities=17% Similarity=0.170 Sum_probs=131.8
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~ 200 (363)
.....+|++++|++.... ..++ +.+|+.|+.++ +..++.|||+|+++.+.|... ...+...|++
T Consensus 62 ~p~~~~le~~lA~l~g~~--------~av~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 129 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAE--------DARG--FASGMAAISST--VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVE 129 (389)
T ss_pred ChhHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCce
Confidence 344679999999996432 3333 57788898777 455678999999999999864 3456678999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
++.++. .|++.+++.+. +++++++++ |||.+++..++++|+++|+++|+++|+|++|....+..
T Consensus 130 v~~vd~-------~d~~~l~~~i~----~tklV~ie~---pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-- 193 (389)
T PRK05968 130 VDYVDG-------RDEEAVAKALP----GAKLLYLES---PTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR-- 193 (389)
T ss_pred EEEeCC-------CCHHHHHHhcc----cCCEEEEEC---CCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC--
Confidence 988864 27888988773 244666654 55556677999999999999999999999997665331
Q ss_pred CchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+. ..+ -.+++.|+||.++.+| .+.|++ +. +++.++++..... .......+++.+.++...|+.
T Consensus 194 ----p~----~~g-~Divv~S~tK~l~g~~~~~gG~i--~~-~~~~~~~l~~~~~---~~~g~~~~~~~A~~~l~~L~t 257 (389)
T PRK05968 194 ----PI----TLG-VDLVIHSASKYLGGHSDTVAGVV--AG-SKEHIARINAEAY---PYLGAKLSPFEAWLLLRGLRT 257 (389)
T ss_pred ----ch----hcC-CcEEEeeccccccCCCCeEEEEE--EE-CHHHHHHHHHHHH---HhCCCCCChHHHHHHHcccCc
Confidence 11 111 2477889999998655 578887 54 4664444432211 122346677777777766653
No 208
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.66 E-value=2.3e-14 Score=139.59 Aligned_cols=238 Identities=14% Similarity=0.089 Sum_probs=144.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CC-----CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
..++|+...|.....+ +.|.++..+..+. +. ...+....-..+|.+.+|+++.. +..++ +
T Consensus 46 ~~~~~~sn~ylgl~~~----p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~--~ 111 (406)
T PRK13393 46 EVTVWCSNDYLGMGQH----PAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--------EAALL--F 111 (406)
T ss_pred cEEEeecccccCCCCC----HHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--------CcEEE--e
Confidence 6889998887644333 3445554444322 10 01111222357788888888632 34444 5
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC-CCCcEEEEEc
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHG 236 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~~~i~ 236 (363)
.+|+.|...+...+....+||.|++....|......++..|.+++.++. .|++.+++.++.. ++++++++++
T Consensus 112 ~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~ 184 (406)
T PRK13393 112 TSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFE 184 (406)
T ss_pred CCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEc
Confidence 6666777666332222227887777777777777777777877766653 3677888777642 2346788889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC-CeEEEEEcCccccccccccceE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG-MELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
+++||+|.+.+ +++|.++|+++++++|+||+|..-.++.. . .......+.. ...++++||||.||++| ||
T Consensus 185 ~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~-G--~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~ 255 (406)
T PRK13393 185 SVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPR-G--GGIAEREGLADRLTIIEGTLAKAFGVMG---GY 255 (406)
T ss_pred CCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCC-C--CchhhhcCCCCCCeEEEEeCchhhcccC---ce
Confidence 99999999988 56667779999999999999862222211 0 1111111111 23677899999999888 99
Q ss_pred EEEeeCChhHHHHHHHHHHhhhccc--cCCCchHHHHHHhccccc
Q 017967 316 MNVVCSSSDLAARVKSQLKRLARPM--YSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 316 i~~v~~~~~~~~~~~~~l~~~~~~~--~~~~s~~~q~~~~~~l~~ 358 (363)
+ ++ +++ +++.+....... ..+.++..+.++...|+.
T Consensus 256 ~--~~-~~~----~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~ 293 (406)
T PRK13393 256 I--TG-SAA----LCDFIRSFASGFIFTTSLPPAVAAGALASVRH 293 (406)
T ss_pred e--eC-CHH----HHHHHHHhCcCceecCccCHHHHHHHHHHHHH
Confidence 8 55 466 455555444332 234455556655555543
No 209
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.65 E-value=3.2e-15 Score=145.48 Aligned_cols=197 Identities=17% Similarity=0.070 Sum_probs=136.0
Q ss_pred CCCCCccccHHHHHHHHHHHccCC-CCC-CC------CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHH
Q 017967 95 TEELQPYVLDVVKKAENLMLERGE-NKE-YL------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL 166 (363)
Q Consensus 95 ~~~~~~~~~~~v~~a~~~~~~~~~-~~~-Y~------~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l 166 (363)
|..+..++++.+.+++.+...... +.. .. ......++|+.+++++.. ++++|++ |.|+|+++++
T Consensus 8 d~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~v~~--~~g~t~a~~~ 79 (402)
T TIGR02006 8 DYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGA------DSREIVF--TSGATESNNL 79 (402)
T ss_pred eCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCCHHHHHHH
Confidence 334445667788888766552211 000 00 112456778888888643 2578888 9999999998
Q ss_pred HHHHHHH--hCCCCEEEEcCCCCcchHHHH---hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 167 AAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 167 ~~~l~~~--~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+...+.. ..+||+|+++.+.|+.+...+ +..|++++.++++ .++.+|++.+++.+++ ++.++++++++||
T Consensus 80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~lv~v~~~~n~ 154 (402)
T TIGR02006 80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRD---DTILVSIMHVNNE 154 (402)
T ss_pred HHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCC---CCEEEEEECCCcC
Confidence 8543332 258999999999998765544 4579999999874 4567899999998863 4678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||..++ +++|.++|+++|+++++|+++..-.. .. .+ ....-.+++.|..|.+|.+| +|++ +..
T Consensus 155 tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~-~~-----~~----~~~~~D~~~~s~~K~~gp~G--~G~l--~~~ 217 (402)
T TIGR02006 155 IGVIQD---IAAIGEICRERKVFFHVDAAQSVGKI-PI-----NV----NELKVDLMSISGHKIYGPKG--IGAL--YVR 217 (402)
T ss_pred ceeccc---HHHHHHHHHHcCCEEEEEcchhcCCc-cc-----Cc----cccCCCEEEEehhhhcCCCc--eEEE--EEc
Confidence 999986 55677779999999999999643211 10 11 11123467788889887556 6888 544
No 210
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.65 E-value=3.1e-14 Score=136.81 Aligned_cols=202 Identities=13% Similarity=0.092 Sum_probs=130.7
Q ss_pred cccHHHHHHHHHHHccC-CCCC-CCC-CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--C
Q 017967 101 YVLDVVKKAENLMLERG-ENKE-YLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--F 175 (363)
Q Consensus 101 ~~~~~v~~a~~~~~~~~-~~~~-Y~~-~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~ 175 (363)
++.+.+.+++.+..... .... |.. ..-..++++.+++++.. ++.++++ +.||++++.++...+... .
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~------~~~~~~~--~~ggt~a~~~a~~~~~~~~~~ 102 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL------PDAYGYI--TSGGTEANIQAVRAARNLAKA 102 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC------CCCCeEE--ecCcHHHHHHHHHHHHhhccC
Confidence 34566666665555321 1111 211 11124566777776532 1346666 899999987774333222 2
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
+||+|++.++.|..+...++..|++++.+|.+ +++.+|++.|++.+.+ ++..++++.++||||...+ +++|.
T Consensus 103 ~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~---l~~I~ 174 (371)
T PRK13520 103 EKPNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDD---NTIGIVGIAGTTELGQVDP---IPELS 174 (371)
T ss_pred CCceEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhh---CCEEEEEEcCCcCCcccCC---HHHHH
Confidence 57999999999999998889999999999873 4567899999999974 3445556678899999987 55667
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
++|+++|+++++|++|.++...-. .....+ .+ ....-..+..|..| |+++|.++|++ +..+++
T Consensus 175 ~l~~~~g~~livD~a~~~~~~~~~-~~~~~~-~~-~~~~vd~~~~s~~K-~~~a~~~~G~~--~~~~~~ 237 (371)
T PRK13520 175 KIALENGIFLHVDAAFGGFVIPFL-DDPPNF-DF-SLPGVDSITIDPHK-MGLAPIPAGGI--LFRDES 237 (371)
T ss_pred HHHHHcCCCEEEEecchhHHHHhh-cCCCCc-cc-cCCCCceEEECCcc-ccCccCCceEE--EEcCHH
Confidence 779999999999999986642100 000000 00 01111234456778 56688999998 665565
No 211
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.64 E-value=1.7e-14 Score=140.99 Aligned_cols=213 Identities=15% Similarity=0.170 Sum_probs=130.3
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC------CCcchHHH----HHHHHHHHhcCCCCcccCCcE
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAF----NKVTAELLFGADNSVLKEQRV 152 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~l----r~aia~~l~~~~~~~~~~~~i 152 (363)
.+.++|..+++ + +++.+.+++..........++. ...-...+ |+.+++++... ..+|
T Consensus 25 ~~~~~l~~~~n------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~------~~~i 91 (416)
T PRK00011 25 EEHIELIASEN------F-VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAE------YANV 91 (416)
T ss_pred hcCeeeecccC------c-CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceee
Confidence 36799987663 2 4677777765433110000110 11112222 33556654322 3345
Q ss_pred EEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-----HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 153 ~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
++ .+|+.++.++ +..++.|||+|+++.|+|..+.. .+...|++++.++++ .+++.+|++.+++.+++.
T Consensus 92 ~~---~sgt~al~~~--l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~~- 164 (416)
T PRK00011 92 QP---HSGSQANAAV--YFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD-EETGLIDYDEVEKLALEH- 164 (416)
T ss_pred ec---CCchHHHHHH--HHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcC-cccCCcCHHHHHHHHHhc-
Confidence 43 4568888776 44557899999999999976532 123456788888774 235789999999999742
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
+++++++++++|| .. .++++|.++|+++|+++|+|++|. ++.+.+.. ... +. ...+++.||||.+
T Consensus 165 -~~k~v~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~--~~~----~~--~~di~~~S~~K~l 230 (416)
T PRK00011 165 -KPKLIIAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVH--PSP----VP--HADVVTTTTHKTL 230 (416)
T ss_pred -CCCEEEECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCcc--CCC----CC--CCcEEEecCCcCC
Confidence 3456666665555 33 346788888999999999999964 33322110 001 11 1247799999976
Q ss_pred ccccccceEEEEeeCChhHHHHHHHHHHhhh
Q 017967 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLA 337 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~ 337 (363)
+|.|.||+ ++++++ ++++++...
T Consensus 231 --~g~~gg~i--~~~~~~----~~~~l~~~~ 253 (416)
T PRK00011 231 --RGPRGGLI--LTNDEE----LAKKINSAV 253 (416)
T ss_pred --CCCCceEE--EeCCHH----HHHHHHHHh
Confidence 69999999 776666 445554443
No 212
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.64 E-value=1.1e-14 Score=143.71 Aligned_cols=200 Identities=18% Similarity=0.197 Sum_probs=130.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC-----CcchHHHHHHHHHH---HhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAEL---LFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~---l~~~~~~~~~~~~i~~~ 155 (363)
+.++|+.|.+. ...+..+....... . ....|.+ ..| .+++++++ +....+.+ .+++.+
T Consensus 69 ~~~~lg~g~~~-----~~~p~~~~~~~~~~--~-~~~~y~~~~~~~~~g---~~~~~~e~~~~la~l~g~~--~~~v~~- 134 (447)
T PRK00451 69 YPSFLGAGAYD-----HYIPAVVDHIISRS--E-FYTAYTPYQPEISQG---TLQAIFEYQTMICELTGMD--VANASM- 134 (447)
T ss_pred CcccCcccccC-----CcCcHHHHHHHhch--h-HHHhcCCCCCccchH---HHHHHHHHHHHHHHHhCCC--cceEEe-
Confidence 67788888862 22334444433211 1 1123544 444 44444322 23333332 457777
Q ss_pred eccchhHHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhh----CCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCc
Q 017967 156 QGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (363)
|.||+++++.+ +..+ ..+||+|+++++.|+.+...++. .|++++.++++ ++ .+|++++++.++ +++
T Consensus 135 -~~g~t~~~~~~--~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~-~~d~~~l~~~i~---~~t 205 (447)
T PRK00451 135 -YDGATALAEAA--LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE--DG-VTDLEALEAAVD---DDT 205 (447)
T ss_pred -cCcHHHHHHHH--HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC--CC-CCCHHHHHHhcC---CCe
Confidence 99999998777 3343 36899999999999988877654 79999999984 24 899999999886 346
Q ss_pred EEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE--ecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE--EcCcccc
Q 017967 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF--DVAYQGFASGSLDNDASSVRLFATRGMELLVA--QSYSKNL 306 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~--De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~--~S~SK~~ 306 (363)
+++++++| ||||.+.+ +++|.++|+++|+++++ |....++... + .+.+.++++. ++|||.+
T Consensus 206 ~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~~------~-----~~~~~D~~~~s~~k~~~~~ 270 (447)
T PRK00451 206 AAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLKP------P-----GEYGADIVVGEGQPLGIPL 270 (447)
T ss_pred EEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCCC------c-----ccCCCCEEEECCCcCCCCC
Confidence 77788889 99999864 67778889999999888 4443221110 0 0112233332 3789999
Q ss_pred ccccccceEEEEeeCChh
Q 017967 307 GLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~ 324 (363)
++.|+|+||+ +++ ++
T Consensus 271 ~~~Gpg~G~l--~~~-~~ 285 (447)
T PRK00451 271 SFGGPYLGFF--ATR-KK 285 (447)
T ss_pred CCCCCCchHH--Hhh-HH
Confidence 8899999999 554 55
No 213
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=3e-14 Score=137.04 Aligned_cols=186 Identities=12% Similarity=0.037 Sum_probs=132.0
Q ss_pred HHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCCeEEEe
Q 017967 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYR 205 (363)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~ 205 (363)
.|++.++....+ ++.++ +.+|++|+..+ ++.++.+||+|+++.|.|+++.. .++..|+++..++
T Consensus 68 ~Le~~la~le~~-------~~~v~---~sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 68 ALCKAIDALEGS-------AGTIL---VPSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred HHHHHHHHHhCC-------CCEEE---ECcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 566666665321 34443 57789998887 56678899999999999999875 4578899888875
Q ss_pred cccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhH
Q 017967 206 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 285 (363)
Q Consensus 206 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (363)
.. +.+.++++++ ++++++++.+|+||++ ...++++|+++|+++|+++|+|++|....+-. +
T Consensus 136 ~~-------~~e~l~~al~---~~TklV~lesPsNP~l---~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~------p 196 (395)
T PRK05967 136 PE-------IGAGIAKLMR---PNTKVVHTEAPGSNTF---EMQDIPAIAEAAHRHGAIVMMDNTWATPLYFR------P 196 (395)
T ss_pred CC-------CHHHHHHhcC---cCceEEEEECCCCCCC---cHHHHHHHHHHHHHhCCEEEEECCccCceecC------h
Confidence 41 3477888886 3577888899999975 67889999999999999999999997654321 1
Q ss_pred HHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 286 VRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 286 ~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++. .-.+++.|.+|.++ -.+...|++ +.+++..++ +.........+.+++....+.+.|+.
T Consensus 197 ----l~~-GaDivv~S~tKy~~Gh~d~~~G~v---~~~~~~~~~----l~~~~~~~G~~~~p~da~l~~rgl~T 258 (395)
T PRK05967 197 ----LDF-GVDISIHAATKYPSGHSDILLGTV---SANEKCWPQ----LLEAHGTLGLCAGPDDTYQILRGLRT 258 (395)
T ss_pred ----hHc-CCCEEEEecccccCCCCCeeEEEE---EcCHHHHHH----HHHHHHHcCCCCCHHHHHHHHcCccc
Confidence 122 23488999999864 234667766 445653333 33333345567888888888776653
No 214
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.64 E-value=2.7e-14 Score=138.35 Aligned_cols=235 Identities=14% Similarity=0.095 Sum_probs=139.9
Q ss_pred EeeccccCCCCCCccccHHHHHHHHHHHc---cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 87 NLGVGAYRTEELQPYVLDVVKKAENLMLE---RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~---~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
||+...|..-..+|.+.+.+.+++.+... .+. ..|+...+..+|++++|+++.. ++.+++ +.|.+..
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr-~~yg~~~~~~~LE~~lA~~~g~-------e~al~~--~sG~~a~ 71 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPR-GFYGTIDAHLELEQCMAEFLGT-------ESAILY--SDGASTT 71 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccc-cccCChHHHHHHHHHHHHHhCC-------CcEEEe--cCcHHHH
Confidence 45555554333334334444444433210 022 3377777899999999999744 355555 4444444
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC--------CCCcEEEEE
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--------PGGSFILLH 235 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--------~~~~~~~~i 235 (363)
. .+ +..++.+||.|++.++.|..+...+...+.+++.++..+ --+++.+.+.+... .++++++++
T Consensus 72 ~-~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 72 S-ST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred H-HH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC----HHHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence 3 33 455678999999999999999887777777777665421 11234433344321 124678888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH-H-hcCCeEEEEEcCccccccccccc
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-A-TRGMELLVAQSYSKNLGLYAERI 313 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~-~~~~~vi~~~S~SK~~~l~G~Rv 313 (363)
.+++||+|.+.+ +++|.++|+++|+++|+||+|. +..-+... ......+ . ......+++.|+||.+| .+.
T Consensus 145 E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G-~g~~~~~g~~p~~~~Div~~slsk~~g---~~g 216 (392)
T PLN03227 145 EGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSG-RGSLEHAGLKPMVHAEIVTFSLENAFG---SVG 216 (392)
T ss_pred cCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCC-CcHHHHcCCCCCCCceEEEeechhhhh---ccC
Confidence 999999999998 5567888999999999999986 44221110 1111111 0 11234688889999765 556
Q ss_pred eEEEEeeCChhHHHHHHHHHHhhhcc-ccCC-CchHHHHHHh
Q 017967 314 GAMNVVCSSSDLAARVKSQLKRLARP-MYSN-PPPMLLGIQL 353 (363)
Q Consensus 314 G~i~~v~~~~~~~~~~~~~l~~~~~~-~~~~-~s~~~q~~~~ 353 (363)
|++ +++ ++ +++.++..... .+.+ .+++.+.++.
T Consensus 217 g~v--~~~-~~----~~~~~~~~~~~~~~~~~~~p~~~~aa~ 251 (392)
T PLN03227 217 GMT--VGS-EE----VVDHQRLSGSGYCFSASAPPFLAKADA 251 (392)
T ss_pred cEE--ecC-HH----HHHHHHHhCcCccccCCCCHHHHHHHH
Confidence 888 544 65 44444433222 2332 2354555443
No 215
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.62 E-value=2.9e-14 Score=137.65 Aligned_cols=194 Identities=15% Similarity=0.042 Sum_probs=133.6
Q ss_pred cCCCCCCccccHHHHHHHHHHHccCCCCCCCC---------CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 93 YRTEELQPYVLDVVKKAENLMLERGENKEYLP---------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---------~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
|.|..+..++++.+.+++.+..... ..++. ..-..++|+.+++++.. ++++|++ |.|+|++
T Consensus 2 yld~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~i~~--t~~~t~a 71 (379)
T TIGR03402 2 YLDNNATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLLGA------EPDEIIF--TSGGTES 71 (379)
T ss_pred cCCCcCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCcHHHH
Confidence 3445555667788888887765321 12211 11245677888887643 2678888 9999999
Q ss_pred HHHHHHHHHHh-CCCCEEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 164 LRLAAALIERY-FPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 164 l~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
++++...+... .+||.|++....|+.+... ++..|++++.++.+ +++.+|++.+++.+++ ++.++++++++
T Consensus 72 ~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~g~~~~~~l~~~i~~---~~~lv~i~~~~ 146 (379)
T TIGR03402 72 DNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVD--EEGRLDLEELRAAITD---DTALVSVMWAN 146 (379)
T ss_pred HHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccC--CCCcCCHHHHHHhcCC---CcEEEEEEccc
Confidence 98884433212 3568899998888766543 44579999999874 3467999999999863 56788889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
||||..++.+ +|.++|+++|+++++|+++.. ...+. .+ ....-.+++.|..|.+|.+| +|++
T Consensus 147 n~tG~~~~~~---~I~~l~~~~g~~vivD~~~~~-g~~~~-----~~----~~~~~D~~~~s~~K~~gp~G--~g~l 208 (379)
T TIGR03402 147 NETGTIFPIE---EIGEIAKERGALFHTDAVQAV-GKIPI-----DL----KEMNIDMLSLSGHKLHGPKG--VGAL 208 (379)
T ss_pred CCeeecccHH---HHHHHHHHcCCEEEEECcccc-ccccc-----Cc----ccCCCCEEEEcHHHcCCCCc--eEEE
Confidence 9999999865 577779999999999999753 21110 11 11123366778889777666 6777
No 216
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.62 E-value=2.8e-14 Score=138.65 Aligned_cols=189 Identities=13% Similarity=0.061 Sum_probs=130.3
Q ss_pred cEEEEeccchhH-HHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHhhCCCCeEEEec-ccCCCCCCCHHHHHHHHHcCC
Q 017967 151 RVATVQGLSGTG-SLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 151 ~i~~~~t~ggt~-al~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~l~~~~ 227 (363)
..++ ++|+|+ ++.++...+.... +||.|+++.-++......+...|++++.++. .+++++.+|++.+++++++..
T Consensus 125 ~a~~--v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~ 202 (444)
T TIGR03531 125 SAFV--VPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIG 202 (444)
T ss_pred EEEE--ECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhcc
Confidence 4555 789995 6665522211112 5899999999999999999999999999995 345679999999999998533
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH----hcCCeEEEEEcCc
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA----TRGMELLVAQSYS 303 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~----~~~~~vi~~~S~S 303 (363)
.+.+++++.+|+ |+.....+++++|+++|++||+++|+|++|..... ....+. ..+.-.+++.|++
T Consensus 203 ~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--------~~~~~~~~g~~~Grad~vv~s~h 272 (444)
T TIGR03531 203 PDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--------KYMELINKAIKVGRVDAVVSSTD 272 (444)
T ss_pred CCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--------hhhhhhhccccccCCCeEEEeCc
Confidence 245666666665 66666789999999999999999999999985321 111111 1111256688999
Q ss_pred cccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 304 K~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
|.+.++|+ |+++ ++.+++. .+++..... ....+.+.|.+.+.++....
T Consensus 273 K~l~~pg~--Gg~I-~~~d~el----~~~i~~~y~--g~~~~s~~~~~~~~ll~~G~ 320 (444)
T TIGR03531 273 KNFMVPVG--GAII-YSFDENF----IQEISKSYP--GRASASPSLDVLITLLSLGS 320 (444)
T ss_pred cCCCCCCC--EEEE-EECCHHH----HHHHHHhcc--CCCCChHHHHHHHHHHHhCH
Confidence 99998887 7762 3556773 444443311 12344567877777665443
No 217
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.62 E-value=6.1e-14 Score=137.42 Aligned_cols=169 Identities=15% Similarity=0.025 Sum_probs=120.1
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHH-------HhCCCCEEEEcCCCCcchHHHHhhCCCC
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-------RYFPGAKVLISSPTWGNHKNIFNDARVP 200 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~-------~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 200 (363)
..+|++++|+++.. +++++ +++|++++.++...+. .+.|||+|+++.|+|..+...+...|++
T Consensus 65 ~~~fe~~lA~~~g~--------~~~v~--~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~ 134 (438)
T PRK15407 65 NDAFEKKLAEFLGV--------RYALL--VNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLV 134 (438)
T ss_pred HHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCE
Confidence 57899999999643 35766 8999999888743332 2469999999999999999999999999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcC-CCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS-GSL 279 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~-~~~ 279 (363)
++.++++ ..++.+|++.+++.++. +++++++++ ++|.. .++++|.++|+++|+++|+|+++.--.. .+.
T Consensus 135 pv~vdvd-~~~~~id~~~le~~i~~---~tkaVi~~~---~~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~ 204 (438)
T PRK15407 135 PVFVDVE-LPTYNIDASLLEAAVSP---KTKAIMIAH---TLGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR 204 (438)
T ss_pred EEEEecC-CCcCCcCHHHHHHHcCc---CCeEEEEeC---CCCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCe
Confidence 9999985 35788999999998863 355555443 34532 4678888999999999999999754332 210
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHH
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~ 328 (363)
.+- ..++-.++...-+|.+. .|. -|++ ++.+++..++
T Consensus 205 -----~~G---~~gd~~~fSf~~~k~~~-~ge-GG~l--~t~d~~l~~~ 241 (438)
T PRK15407 205 -----MTG---TFGDIATLSFYPAHHIT-MGE-GGAV--FTNDPLLKKI 241 (438)
T ss_pred -----eee---ccCceEEEeCCCCCCcc-ccC-ceEE--EECCHHHHHH
Confidence 111 12232333333467785 566 4888 8877774443
No 218
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.62 E-value=7.5e-14 Score=134.87 Aligned_cols=193 Identities=18% Similarity=0.066 Sum_probs=131.2
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEE
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVL 181 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vl 181 (363)
.+...+++.+.+... .|....+..+|++++++++... +.++ +.||++|+.++ +..+ +.+||+|+
T Consensus 9 ~~~~~~~v~~~~~~~---~~~~g~~~~~le~~la~~~g~~--------~~v~--~~sgt~al~~~--l~al~~~~Gd~Vi 73 (380)
T TIGR03588 9 DQDDIDAVVEVLKSD---FLTQGPTVPAFEEALAEYVGAK--------YAVA--FNSATSALHIA--CLALGVGPGDRVW 73 (380)
T ss_pred CHHHHHHHHHHHhcC---CccCChhHHHHHHHHHHHHCCC--------eEEE--EcCHHHHHHHH--HHHcCCCCCCEEE
Confidence 334445555544332 2434556789999999997442 3334 56899998888 3333 56999999
Q ss_pred EcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Q 017967 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (363)
Q Consensus 182 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~ 260 (363)
++.|+|..+...++..|++++.++++ ++++.+|++.+++.+++.+ ++++++++ .|++|...+ +++|.++|++
T Consensus 74 v~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~---~~~i~~l~~~ 146 (380)
T TIGR03588 74 TTPITFVATANCALYCGAKVDFVDID-PDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD---MQAIAALAKK 146 (380)
T ss_pred eCCcchHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---HHHHHHHHHH
Confidence 99999999999999999999999985 3467899999999997321 13455553 467897754 6777888999
Q ss_pred cCCeEEEecCCCCCc-CCCCCCchhHHHHHHhcCCeEEEEEcC--ccccccccccceEEEEeeCChhHHHHH
Q 017967 261 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 261 ~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
+|+++|+|+++.... +++. .+..+ +.+ .+.+.|| +|.++. | .-|++ ++.+++..+++
T Consensus 147 ~~~~lI~D~a~a~g~~~~~~-----~~g~~-~~~--d~~~~S~~~~K~~~~-~-~GG~v--~~~~~~~~~~~ 206 (380)
T TIGR03588 147 HGLKIIEDASHALGAEYGGK-----PVGNC-RYA--DATVFSFHPVKIITT-A-EGGAV--TTNDEELAERM 206 (380)
T ss_pred cCCEEEEECCCcccCccCCE-----eCCCc-ccc--ceEEEecCCCCcccc-c-CceEE--EECCHHHHHHH
Confidence 999999999976532 2211 11000 122 3455555 588863 4 46777 77777754444
No 219
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.61 E-value=5.7e-14 Score=136.82 Aligned_cols=242 Identities=13% Similarity=0.070 Sum_probs=148.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|.. .+.+.+++.+.+... ....| ......+|.+.++++. . .+++.+ +.+|+
T Consensus 40 ~~lD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~-~-------~~~v~~--~~sGs 106 (406)
T PRK12381 40 EYIDFAGGIAVNALGHA--HPALREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT-F-------ADRVFF--CNSGA 106 (406)
T ss_pred EEEEcCcCHhhccCCCC--CHHHHHHHHHHHhhcccccCcc-CCHHHHHHHHHHHhhC-C-------CCeEEE--cCCcH
Confidence 68888765321222332 445565555544321 11122 1222345666666552 1 268877 99999
Q ss_pred HHHHHHHHHHHHhC------CCCEEEEcCCCCcchHHHHhh-CCCCeEE---Eeccc--CCCCCCCHHHHHHHHHcCCCC
Q 017967 162 GSLRLAAALIERYF------PGAKVLISSPTWGNHKNIFND-ARVPWSE---YRYYD--PKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 162 ~al~l~~~l~~~~~------~gd~Vlv~~P~y~~~~~~~~~-~G~~~~~---v~~~~--~~~~~~d~~~l~~~l~~~~~~ 229 (363)
+|++.+..+..... ...+|+..+.+|.+....... .|..... .++.. ......|++.+++.+. ++
T Consensus 107 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~ 183 (406)
T PRK12381 107 EANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID---DQ 183 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc---CC
Confidence 99999976654442 346899999999777543322 2211000 00000 0001247889988885 23
Q ss_pred cEEEEEcCCCCCCCCCC--CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 230 SFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~--s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
..++++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|.++...+ .......+ ...++ +.+|||.++
T Consensus 184 ~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~~~~-~v~pD---i~t~sK~l~ 255 (406)
T PRK12381 184 TCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHY-GVTPD---VLTTAKALG 255 (406)
T ss_pred eeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhhHhh-CCCCC---EEEehhhhh
Confidence 445554 7999998765 68999999999999999999999998886543 12221111 21223 359999998
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+|+|+||+ +++ ++ +++.+........++.+++.|.++...|+
T Consensus 256 -gG~~ig~~--~~~-~~----~~~~~~~~~~~~t~~~~pl~~aaa~a~l~ 297 (406)
T PRK12381 256 -GGFPIGAM--LTT-EK----CASVMTVGTHGTTYGGNPLASAVAGKVLE 297 (406)
T ss_pred -CCCceEEE--EEc-HH----HHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 89999999 665 55 55555543344455778888888766443
No 220
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.61 E-value=9.8e-14 Score=133.80 Aligned_cols=240 Identities=13% Similarity=0.108 Sum_probs=152.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-+ + .+.+.+++.+.+... ..+ +..-..++++.+++.+.... ...+.+ +.+|++|
T Consensus 30 ~~lD~~s~~~~~~lG--~-~p~v~~a~~~~~~~~--~~~-~~~~~~~~~~~la~~l~~~~-----~~~~~~--~~SGseA 96 (375)
T PRK04260 30 KYLDFSSGIGVTNLG--F-HPQVQQALQKQAGLI--WHS-PNLYLNSLQEEVAQKLIGDK-----DYLAFF--CNSGAEA 96 (375)
T ss_pred EEEECCCCcccccCC--C-CHHHHHHHHHHHHhc--Ccc-cCccCCHHHHHHHHHHhcCc-----CCEEEE--cCccHHH
Confidence 688987664211122 2 355777766655431 112 22234678889998764421 123455 8999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCC---------CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEE
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARV---------PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL 233 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~---------~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 233 (363)
.+.+..+......+++|++.+.+|.+.. ..+...|. .+..++.. ...|++.+++.+. ++..++
T Consensus 97 ~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~dl~~l~~~l~---~~~a~v 169 (375)
T PRK04260 97 NEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA----IFNDLNSVKALVN---KNTAAV 169 (375)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe----CCCCHHHHHHhcC---CCeEEE
Confidence 9988655544456688999999887542 22221111 11111110 0237889988775 345688
Q ss_pred EEcCCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc
Q 017967 234 LHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (363)
Q Consensus 234 ~i~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R 312 (363)
++.+++|++|...+ .+.+++|.++|+++|+++|+||+|.++...+ ..+..... ...++ +.||||.++ +|+|
T Consensus 170 i~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~l~-~G~~ 241 (375)
T PRK04260 170 MLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG---KLYAFEHY-GIEPD---IFTLAKGLA-NGVP 241 (375)
T ss_pred EECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhHhh-CCCCC---EEEeccccc-CCcc
Confidence 88999999999754 5779999999999999999999998875442 12221111 22234 338999998 8999
Q ss_pred ceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 313 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 313 vG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+||+ +++ ++ +.+.+.........+.++++|.++...|+.
T Consensus 242 ig~~--~~~-~~----~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~ 280 (375)
T PRK04260 242 VGAM--LAK-SS----LGGAFGYGSHGSTFGGNKLSMAAASATLDI 280 (375)
T ss_pred eEEE--EEc-HH----HHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9999 776 55 455554333344556788889988877754
No 221
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.61 E-value=1.1e-13 Score=134.77 Aligned_cols=239 Identities=13% Similarity=0.095 Sum_probs=145.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|......|+ -.+.+.+++.+.++.. ....+.......+|.+.++++. . .+++++ +++|++
T Consensus 42 ~~lD~~~~~~~~~~Gh--~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~SGs~ 109 (401)
T PRK00854 42 RYLDCLSAYSAVNQGH--CHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT-G-------SHKVLP--MNSGAE 109 (401)
T ss_pred EEEEcCcchhhccCCC--CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-C-------CCEEEE--eCCcHH
Confidence 6788766532111111 1345555555544321 1111122334556777777663 1 247777 899999
Q ss_pred HHHHHHHHHHHh-----C--CC-CEEEEcCCCCcchHHHHhhCCC-------------CeEEEecccCCCCCCCHHHHHH
Q 017967 163 SLRLAAALIERY-----F--PG-AKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 163 al~l~~~l~~~~-----~--~g-d~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
|++.+..++... . +| ++|++..-+|.+....+...+. .+..++ ..|++.+++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence 999986655433 1 24 6788888777664332222111 222222 247899999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
.+. ++++++++.+|+||||.+++. +.+++|.++|++||+++|+||+|.++...+ ..... .......++++
T Consensus 183 ~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g---~~~~~-~~~g~~~D~~~-- 253 (401)
T PRK00854 183 AIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTG---KLLAE-EHEGIEADVTL-- 253 (401)
T ss_pred HhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---hHhHH-hhcCCCCCEEE--
Confidence 886 357788889999999999985 459999999999999999999998876542 11111 11121223333
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++|.++-..+|+||+ +++ ++ +.+.+........++.+++.|.++...|+.
T Consensus 254 -~~K~l~gg~~~ig~v--~~~-~~----~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~ 303 (401)
T PRK00854 254 -IGKALSGGFYPVSAV--LSN-SE----VLGVLKPGQHGSTFGGNPLACAVARAALKV 303 (401)
T ss_pred -ecccccCCccCeEEE--EEc-HH----HHhcccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 369987433799999 665 55 444444333344456788888888776654
No 222
>PLN02651 cysteine desulfurase
Probab=99.59 E-value=9.1e-14 Score=133.48 Aligned_cols=199 Identities=15% Similarity=0.034 Sum_probs=133.3
Q ss_pred cCCCCCCccccHHHHHHHHHHHccCCCC------CCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHH
Q 017967 93 YRTEELQPYVLDVVKKAENLMLERGENK------EYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (363)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al 164 (363)
|.|..+..++++.+.+++.+........ .+.. ..-..++|+.+++++.. ++++|++ |.|+|+++
T Consensus 2 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~v~~--t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGA------DPKEIIF--TSGATESN 73 (364)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--eCCHHHHH
Confidence 3455566677888888887665321100 0000 11145677788887643 2578877 99999998
Q ss_pred HHHHHHH-H-HhCCCCEEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 165 RLAAALI-E-RYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 165 ~l~~~l~-~-~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
+++...+ . ...+||+|++....|+.+... ++..|++++.++.+ +++.+|++.+++++++ ++.++++++++
T Consensus 74 ~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~---~t~lv~v~~~~ 148 (364)
T PLN02651 74 NLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRP---DTALVSVMAVN 148 (364)
T ss_pred HHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCC---CcEEEEEECCC
Confidence 8774332 1 135899999999777665443 34679999999883 4567899999999973 46788889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEe
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||||..++. ++|.++|+++|+++++|.++..-... . . ++..+-.+++.|..|.+|. ..+|++ +
T Consensus 149 n~tG~~~~l---~~I~~~~~~~g~~~~vD~a~~~g~~~-~-----~----~~~~~~D~~~~s~hK~~gp--~G~g~l--~ 211 (364)
T PLN02651 149 NEIGVIQPV---EEIGELCREKKVLFHTDAAQAVGKIP-V-----D----VDDLGVDLMSISGHKIYGP--KGVGAL--Y 211 (364)
T ss_pred CCceecccH---HHHHHHHHHcCCEEEEEcchhhCCcc-c-----C----cccCCCCEEEechhhhCCC--CceEEE--E
Confidence 999999875 56677799999999999996532211 1 1 1122345777888996543 346888 5
Q ss_pred eC
Q 017967 320 CS 321 (363)
Q Consensus 320 ~~ 321 (363)
..
T Consensus 212 v~ 213 (364)
T PLN02651 212 VR 213 (364)
T ss_pred Ec
Confidence 44
No 223
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.59 E-value=2.3e-13 Score=132.32 Aligned_cols=246 Identities=11% Similarity=0.014 Sum_probs=141.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-...-| +-.+.+.+++.+.++.. ............++++.++++. + .+.+.+ +.+|++
T Consensus 32 ~~lD~~~~~~~~~~G--h~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~----~~~~~~--~~SGs~ 99 (400)
T PTZ00125 32 KYYDFLSAYSAVNQG--HCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF----G----YDKVLP--MNSGAE 99 (400)
T ss_pred EEEEcccCHhhccCC--cCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC----C----CCEEEE--eCCcHH
Confidence 688887663211111 12455666665554321 1011101223334444554442 1 257766 899999
Q ss_pred HHHHHHHHHHHh--------CCCCEEEEcCCCCcchHHHHh-hCCCCeE---EEecccC--CCCCCCHHHHHHHHHcCCC
Q 017967 163 SLRLAAALIERY--------FPGAKVLISSPTWGNHKNIFN-DARVPWS---EYRYYDP--KTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 163 al~l~~~l~~~~--------~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~---~v~~~~~--~~~~~d~~~l~~~l~~~~~ 228 (363)
|.+.+..+.... ..+++|++.+-+|.+...... ..+.... ..+.... .-...|++.+++.++. +
T Consensus 100 A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~ 177 (400)
T PTZ00125 100 AGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD--P 177 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC--C
Confidence 999885544321 134778888888766543332 2221100 0010000 0012389999998862 3
Q ss_pred CcEEEEEcCCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 229 GSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
+..++++.+++||||.+++ .+.+++|.++|++||+++|+||+|.++...+. .... ......++++ +|||.++
T Consensus 178 ~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~---~~~~-~~~~~~pd~~---~~sK~l~ 250 (400)
T PTZ00125 178 NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK---LLAH-DHEGVKPDIV---LLGKALS 250 (400)
T ss_pred CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch---hhHH-HhcCCCCCEE---EEccccc
Confidence 5667777888999999996 45599999999999999999999988765421 1111 1111122333 4789998
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
..++|+||+ +++ ++ +++.+........++.+++.|.++...|+
T Consensus 251 ~g~~~ig~v--~~~-~~----~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 293 (400)
T PTZ00125 251 GGLYPISAV--LAN-DD----VMLVIKPGEHGSTYGGNPLACAVAVEALE 293 (400)
T ss_pred CCCcCcEEE--EEc-HH----HHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 444599999 665 55 45554433334445677888887765554
No 224
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.59 E-value=2.3e-13 Score=130.95 Aligned_cols=175 Identities=13% Similarity=0.089 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh----CCCCEEEEcCCCCcchHHHHhhCCCCeEEE
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY----FPGAKVLISSPTWGNHKNIFNDARVPWSEY 204 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~----~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 204 (363)
.++++.+++++.. ++.++++ +.|+++++.++...+..+ .+||.|++++++|..+...++..|++++.+
T Consensus 62 ~~~~~~la~~~g~------~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v 133 (373)
T TIGR03812 62 EEVVGSLGNLLHL------PDAYGYI--VSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHhCC------CCCCeEE--eccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEE
Confidence 5677777777533 2456666 899999977764332221 367999999999999999999999999999
Q ss_pred ecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC--Cc
Q 017967 205 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD--ND 282 (363)
Q Consensus 205 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~--~~ 282 (363)
+.+ .++.+|++.+++.+.+ +...++++ +|+||||...+ +++|.++|+++|+++++|++|..+...-.. ..
T Consensus 134 ~~~--~~~~~d~~~l~~~l~~--~~~~vv~~-~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 134 PLD--EDYTVDVKDVEDLIDD--NTIGIVGI-AGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred eeC--CCCCcCHHHHHHHHhh--CcEEEEEE-CCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCC
Confidence 984 4678999999999874 22234444 47999999876 455667799999999999999765321000 00
Q ss_pred hhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
...+. +...+-+ .+..|..| |++++.|.|++ +..+++
T Consensus 206 ~~~~d-~~~~~~d-~~~~s~~K-~~~~~~~~G~~--~~~~~~ 242 (373)
T TIGR03812 206 PPPFD-FSLPGVQ-SITIDPHK-MGLSPIPAGGI--LFRSKS 242 (373)
T ss_pred CCCcc-ccCCCCC-EEEECccc-cCCCcCCceEE--EEeCHH
Confidence 00000 0000112 23456779 77788999987 544566
No 225
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=8.8e-14 Score=135.99 Aligned_cols=155 Identities=17% Similarity=0.103 Sum_probs=117.2
Q ss_pred chHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCCeE
Q 017967 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWS 202 (363)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~ 202 (363)
...+|.+.+|++... +..++ +.+|++|+.++ +..++.|||+|+++.+.|..... .+...|++++
T Consensus 64 ~~~~le~~lA~l~g~--------~~al~--~~SG~~Ai~~a--l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~ 131 (427)
T PRK05994 64 TNAVLEERVAALEGG--------TAALA--VASGHAAQFLV--FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVR 131 (427)
T ss_pred cHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEE
Confidence 457788999998533 23444 79999998877 45567899999999999986443 4567899988
Q ss_pred EEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 203 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
.++. .|++.+++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|+++.......
T Consensus 132 ~vd~-------~d~~~l~~ai~~---~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~---- 194 (427)
T PRK05994 132 WADA-------DDPASFERAITP---RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLIR---- 194 (427)
T ss_pred EECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 8865 278899988863 4678888999999999986 5677788999999999999986322110
Q ss_pred hhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
+ .+. .-.+++.|++|.+|-+|-.+|.++
T Consensus 195 --p----l~~-gaDivv~S~tK~lgg~~~~~gG~v 222 (427)
T PRK05994 195 --P----IEH-GADIVVHSLTKFLGGHGNSMGGII 222 (427)
T ss_pred --c----ccc-CCcEEEEcCccccCCCCCcEEEEE
Confidence 1 111 233888999999987777788773
No 226
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.54 E-value=9.2e-13 Score=125.61 Aligned_cols=173 Identities=24% Similarity=0.125 Sum_probs=122.8
Q ss_pred CCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCC
Q 017967 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVP 200 (363)
Q Consensus 122 Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 200 (363)
|.......++++++++++.. +++++ +.+|++|+.++ +..+ +.+||+|+++.++|..+...+...|++
T Consensus 14 ~~~~~~~~~~~~~la~~~~~--------~~~~~--~~sgt~al~~~--l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~ 81 (352)
T cd00616 14 LTLGPKVREFEKAFAEYLGV--------KYAVA--VSSGTAALHLA--LRALGIGPGDEVIVPSFTFVATANAILLLGAT 81 (352)
T ss_pred ccCCHHHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEEEeCCcchHHHHHHHHHcCCe
Confidence 33445688999999999632 35655 78999998888 3333 469999999999999999999999999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
++.++++ ++++.+|++.+++.+++ ++++++++ ||+|...+ +++|.++|+++|+++|+|+++........
T Consensus 82 ~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~- 150 (352)
T cd00616 82 PVFVDID-PDTYNIDPELIEAAITP---RTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKG- 150 (352)
T ss_pred EEEEecC-CCcCCcCHHHHHHhcCc---CCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECC-
Confidence 9999984 23688999999998852 35555543 58998765 55667779999999999999763321110
Q ss_pred CchhHHHHHHhcCCeEEEEEcCc--cccccccccceEEEEeeCChhHHHHH
Q 017967 281 NDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~S--K~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
. .. .. ...+.+.||+ |.++ +-+.|++ ++.+++..+++
T Consensus 151 --~-~~----~~-~~d~~~~S~~~~K~~~--~~~gg~~--~~~~~~~~~~~ 189 (352)
T cd00616 151 --R-KV----GT-FGDAGAFSFHPTKNLT--TGEGGAV--VTNDEELAERA 189 (352)
T ss_pred --E-Ec----cc-CcceeEEcCCCCCCCc--ccCceEE--EECCHHHHHHH
Confidence 0 00 11 1234566665 8774 4457888 77777744443
No 227
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.54 E-value=5.5e-13 Score=130.65 Aligned_cols=246 Identities=16% Similarity=0.124 Sum_probs=153.0
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
..++|+..|.....-|. -.+.+.+++.+.++... ..|.+..+..+|.+.+++.+- ..+++.+ +.+|++
T Consensus 50 ~~~lD~~~g~~~~~lGh--~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~~-------~~~~v~~--~~sGse 117 (426)
T PRK00062 50 NEYIDYVGSWGPMILGH--AHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELVP-------SIEMVRM--VNSGTE 117 (426)
T ss_pred CEEEEcccchhhhhcCC--CCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCC-------CCCEEEE--ecCHHH
Confidence 37899988754222232 24566666665554433 335566677788888877641 1367877 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC--------CCC-----eEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA--------RVP-----WSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~--------G~~-----~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|++.+..+......+++|+..+++|.++...+... +.. ...++.....-...|++.+++.+...+++
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 197 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDE 197 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCc
Confidence 99999665544445689999999999876333211 100 00000000000113788998888653344
Q ss_pred cEEEEEc-CCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 230 SFILLHG-CAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 230 ~~~~~i~-~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
...+++. .++| +|...+ .+.+++|.++|++||+++|+||+|.++..+. ......+ ...++ +.+|||.++
T Consensus 198 ~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~~~~-~~~pD---i~~~gK~l~ 268 (426)
T PRK00062 198 IAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQGYY-GVTPD---LTTLGKIIG 268 (426)
T ss_pred EEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHHHHh-CCCcc---hHhhhhHhh
Confidence 4455544 4455 787776 7889999999999999999999999885542 1122212 22122 368899998
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhh---hccccCCCchHHHHHHhcccc
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRL---ARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~---~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.|+++|++ +++ ++ +.+.+... ......+.+++.+.++...|+
T Consensus 269 -~G~p~ga~--~~~-~~----i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 313 (426)
T PRK00062 269 -GGLPVGAF--GGR-RE----IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK 313 (426)
T ss_pred -CCCcceee--eEH-HH----HHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence 89999999 665 55 45544311 122334677777877766555
No 228
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=1.1e-12 Score=126.69 Aligned_cols=196 Identities=18% Similarity=0.133 Sum_probs=141.0
Q ss_pred CccccHHHHHHHHHHHcc-CCCC---CCCC----CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHH
Q 017967 99 QPYVLDVVKKAENLMLER-GENK---EYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAAL 170 (363)
Q Consensus 99 ~~~~~~~v~~a~~~~~~~-~~~~---~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l 170 (363)
....+..|.+++.+.... ..+. .|.. ..-..+.|+.+|++++... .++|++ |.|+|.++++++..
T Consensus 31 ~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~-----~~eIvf--t~~tT~aln~va~~ 103 (405)
T COG0520 31 TSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADS-----SDEIVF--TRGTTEALNLVARG 103 (405)
T ss_pred cccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE--eCChhHHHHHHHHH
Confidence 344677777777665421 1111 1211 1245678999999975541 378988 99999999999765
Q ss_pred HHH-hCCCCEEEEcCCCCcch----HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC
Q 017967 171 IER-YFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (363)
Q Consensus 171 ~~~-~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~ 245 (363)
+.. +.+||.|++..--|... ....++.|++++.+|++ +++.++.+.+++.++ ++++++.++.-+|-||.+
T Consensus 104 l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~ 178 (405)
T COG0520 104 LGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTV 178 (405)
T ss_pred hhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcC---CCceEEEEECcccccccc
Confidence 543 57999999999877544 44556789999999985 567899999999776 468899999999999998
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc-ccccccccceEEEEeeCChh
Q 017967 246 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK-NLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 246 ~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~l~G~RvG~i~~v~~~~~ 324 (363)
.+ +++|+++|+++|.++++|.+ +....... .+ +..+-.+++.|--| .+|..| +|.+ ... ++
T Consensus 179 ~p---v~~I~~la~~~ga~v~VDaa-q~~~h~~i-----dv----~~l~~Df~afsgHKwl~gP~G--iGvL--y~r-~~ 240 (405)
T COG0520 179 NP---VKEIAELAHEHGALVLVDAA-QAAGHLPI-----DV----QELGCDFLAFSGHKWLLGPTG--IGVL--YVR-KE 240 (405)
T ss_pred ch---HHHHHHHHHHcCCEEEEECc-cccCccCC-----Cc----hhcCCCEEEEcccccccCCCc--eEEE--EEc-hH
Confidence 76 56677789999999999999 33332211 11 23356688999999 666446 6888 665 55
No 229
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.53 E-value=9.6e-13 Score=130.69 Aligned_cols=204 Identities=13% Similarity=0.069 Sum_probs=136.2
Q ss_pred EeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC---CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY---LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y---~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
-++.|.+. ...++.+.+++.........+.| ...+|..+++.++.+++....|.+ ++.+..+.|+++.
T Consensus 72 ~~g~G~~~-----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~----~~~l~~~~GA~a~ 142 (481)
T PRK04366 72 FYPLGSCT-----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD----AVTLQPAAGAHGE 142 (481)
T ss_pred eecCcccC-----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC----ceEEEeCcHHHHH
Confidence 46667652 22344555555443211223567 346789999999998887776653 3333224555555
Q ss_pred HHHHHHHH-HHhCCCC----EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 164 LRLAAALI-ERYFPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 164 l~l~~~l~-~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
+..+..+. ....+|| +|+++.|.|+.+...++..|++++.++++ .++.+|++.|++.+.+ +++++++++|
T Consensus 143 ~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~---~t~~V~v~~P 217 (481)
T PRK04366 143 LTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGE---DTAALMLTNP 217 (481)
T ss_pred HHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhccc---CCeEEEEeCC
Confidence 43332111 2245776 99999999999999999999999999983 4578999999998863 4667777898
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc----cccce
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIG 314 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~----G~RvG 314 (363)
| |||.. ..++++|+++|+++|.++++|.++..-..+.. .. .+. .-.+++++..|.|+.| |-.+|
T Consensus 218 n-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-----~~---~~~-GaD~~~~~~hK~l~~P~g~Ggp~~G 285 (481)
T PRK04366 218 N-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGKA-----RP---GDM-GFDVVHLNLHKTFSTPHGGGGPGSG 285 (481)
T ss_pred C-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhcccC-----Cc---ccc-CCCEEEEechhhcCCCCCCCCCCee
Confidence 7 99954 45799999999999999999999642111110 00 011 2356778888988744 45578
Q ss_pred EE
Q 017967 315 AM 316 (363)
Q Consensus 315 ~i 316 (363)
++
T Consensus 286 ~l 287 (481)
T PRK04366 286 PV 287 (481)
T ss_pred ee
Confidence 87
No 230
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=2e-12 Score=126.99 Aligned_cols=256 Identities=16% Similarity=0.163 Sum_probs=146.4
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+++ .++|+..|.-...-|+ -.+.+.+++.+.+.... .+.......+.+..+|+.+...... .-+++.+ ++
T Consensus 38 ~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~ 108 (443)
T PRK08360 38 IEGN-EYIDFLSDAAVQNVGH--NNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAPG--DNPKVSF--GL 108 (443)
T ss_pred CCCC-EEEEccccHhhcccCC--CCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCCC--CCCEEEE--cC
Confidence 3443 7888877742222222 24556666655553311 1111111123334444444332211 1257877 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhCCC------------CeEEEecccCCC--CC--------CC
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKT--VG--------LD 215 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~~--~~--------~d 215 (363)
+|++|.+.+..+...+....+|+...-+|.+... .+...|. .+..+|+.+... ++ -+
T Consensus 109 sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (443)
T PRK08360 109 SGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMEC 188 (443)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHH
Confidence 9999999997765555444678777777755431 1111111 123333311100 11 12
Q ss_pred HHHHHHHHHc--CCCCcEEEEEcCCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc
Q 017967 216 FEGMIADIKA--APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (363)
Q Consensus 216 ~~~l~~~l~~--~~~~~~~~~i~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (363)
++.+++.+.. .+++...+++..-+||+|.+++ .+.+++|.++|+++|+++|+||+|.+|...+ .......+ +.
T Consensus 189 ~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~~-~~ 264 (443)
T PRK08360 189 VEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEHF-GV 264 (443)
T ss_pred HHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhhc-CC
Confidence 4456666653 1234566665556799999888 5579999999999999999999999986543 12222222 22
Q ss_pred CCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 293 ~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.++++ +|||.++ +|+|+||+ +++ ++ +++.+.........+.++++|.++...|+.
T Consensus 265 ~pDii---tlsK~l~-~G~pigav--~~~-~~----i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 319 (443)
T PRK08360 265 EPDII---TLGKPLG-GGLPISAT--IGR-AE----IMDSLPPLAHAFTLSGNPVASAAALAVIEE 319 (443)
T ss_pred CCCEE---Eeccccc-CCceeEEE--EEc-HH----HHhhhcCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 34443 6799999 99999999 665 66 455554333334456677778877666554
No 231
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=2.6e-12 Score=125.61 Aligned_cols=156 Identities=21% Similarity=0.179 Sum_probs=118.7
Q ss_pred cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCCe
Q 017967 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPW 201 (363)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~ 201 (363)
.-..+|++.+|++.... ..++ |.+|++|+.++ +..++.+||+|+++...|......+ ...|+++
T Consensus 64 p~~~~le~~lA~l~g~~--------~av~--~sSGt~Al~~a--l~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v 131 (433)
T PRK08134 64 PTVAVLEERVAALEGGV--------GAIA--TASGQAALHLA--IATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIET 131 (433)
T ss_pred hHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEE
Confidence 34688999999996432 3455 89999999988 4455789999999999998665444 5689999
Q ss_pred EEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCC
Q 017967 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 281 (363)
+.++.+ |++.+++++++ +++++++.+|+||||.+.+ +++|.++|+++|+++|+|.++..-....
T Consensus 132 ~~vd~~-------d~~~l~~~i~~---~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~~--- 195 (433)
T PRK08134 132 TFVKPG-------DIDGWRAAIRP---NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLLR--- 195 (433)
T ss_pred EEECCC-------CHHHHHHhcCC---CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 888762 78999999873 5667788899999999987 5666777999999999999975322211
Q ss_pred chhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 282 ~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
+. +. .-.+++.|.+|.+|-+|-.+|.++
T Consensus 196 ---pl----~~-GaD~vv~S~tK~l~g~g~~~gG~v 223 (433)
T PRK08134 196 ---PF----EH-GADLVYHSATKFLGGHGTAIGGVL 223 (433)
T ss_pred ---ch----hc-CCCEEEeccccccCCCCCceEEEE
Confidence 11 11 234888999999987887788873
No 232
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.50 E-value=2.8e-12 Score=125.35 Aligned_cols=188 Identities=11% Similarity=0.082 Sum_probs=120.6
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCC-------------CeEEEecccCCCCCC-
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPKTVGL- 214 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~~~~~~- 214 (363)
+++.+ +.+|++|.+.+..+...+....+|+...-+|.+..... ...|. .+..+|+... ..++
T Consensus 102 ~~~~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~-~~~~~ 178 (421)
T PRK09792 102 AKTAF--FTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSD-LHGIS 178 (421)
T ss_pred ceEEE--eCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccccc
Confidence 47766 88999999999776554433367888888886653211 11111 1233333111 1122
Q ss_pred ---CHHHHHHHHHc--CCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH
Q 017967 215 ---DFEGMIADIKA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (363)
Q Consensus 215 ---d~~~l~~~l~~--~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (363)
+++.+++.+.+ .+++...+++..-++|+|..+ +.+.+++|.++|+++|+++|+||+|.+|...+ ..+....
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~ 255 (421)
T PRK09792 179 TQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG---KLFAMDH 255 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHh
Confidence 24777777763 123445555555699999876 89999999999999999999999999996643 2233333
Q ss_pred HHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcc
Q 017967 289 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSS 355 (363)
Q Consensus 289 ~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~ 355 (363)
+... ++ +.+|||.++ +|+|+||+ +++ ++ +.+.+........++.++++|.++...
T Consensus 256 ~~~~-pD---i~t~gK~l~-~G~pigav--~~~-~~----i~~~~~~~~~~~T~~gnpl~~aaa~a~ 310 (421)
T PRK09792 256 YADK-PD---LMTMAKSLA-GGMPLSGV--VGN-AN----IMDAPAPGGLGGTYAGNPLAVAAAHAV 310 (421)
T ss_pred cCCC-Cc---EEEeehhhc-CCCceEEE--EEc-HH----HHhccCCCCcCCCCCCCHHHHHHHHHH
Confidence 3112 22 578999998 99999999 665 55 444443223334456778888854433
No 233
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.50 E-value=7.2e-13 Score=124.43 Aligned_cols=195 Identities=16% Similarity=0.086 Sum_probs=144.0
Q ss_pred cCCCCCCccccHHHHHHHHHHHcc-----CCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 93 YRTEELQPYVLDVVKKAENLMLER-----GENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~-----~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
|.|.+..+++.+.+.+++...+.. ...+.|+. ...+.+.|+.+|+.+... +++|++ |.|||++.+
T Consensus 4 YlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~------~~eIiF--TSG~TEsnN 75 (386)
T COG1104 4 YLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD------PEEIIF--TSGATESNN 75 (386)
T ss_pred cccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--ecCCcHHHH
Confidence 556677777888888887766532 22344432 344678889999997554 689988 999999999
Q ss_pred HHHHHHH--HhC----CCCEEEEcCCCCcchHHHHhhC---CCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEc
Q 017967 166 LAAALIE--RYF----PGAKVLISSPTWGNHKNIFNDA---RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (363)
Q Consensus 166 l~~~l~~--~~~----~gd~Vlv~~P~y~~~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~ 236 (363)
++ +.. ... .|.+|+++.--++...+.++.. |++|.++|++ .++.+|+++|+++++ +++.++.+.
T Consensus 76 la--I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~--~~G~v~~e~L~~al~---~~T~LVSim 148 (386)
T COG1104 76 LA--IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVD--SNGLVDLEQLEEALR---PDTILVSIM 148 (386)
T ss_pred HH--HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCC--CCCeEcHHHHHHhcC---CCceEEEEE
Confidence 88 443 221 4689999998888887777644 9999999994 467899999999998 468899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
..||-||++++.++ |.++|+++++++.+|.+ +.+..-+. .+ +...-.+...|-.|.+|..| +|.+
T Consensus 149 ~aNnE~G~IQpI~e---i~~i~k~~~i~fHvDAv-Qa~Gkipi-----~~----~~~~vD~ls~SaHK~~GpkG--iGaL 213 (386)
T COG1104 149 HANNETGTIQPIAE---IGEICKERGILFHVDAV-QAVGKIPI-----DL----EELGVDLLSFSAHKFGGPKG--IGAL 213 (386)
T ss_pred ecccCeeecccHHH---HHHHHHHcCCeEEEehh-hhcCceec-----cc----cccCcceEEeehhhccCCCc--eEEE
Confidence 99999999988665 55569999999999999 55543211 11 11113455667789999888 6888
Q ss_pred E
Q 017967 317 N 317 (363)
Q Consensus 317 ~ 317 (363)
+
T Consensus 214 y 214 (386)
T COG1104 214 Y 214 (386)
T ss_pred E
Confidence 4
No 234
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.50 E-value=3e-12 Score=124.47 Aligned_cols=252 Identities=13% Similarity=0.022 Sum_probs=149.2
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+.+++ .++|+..|.-...-|+ -.+.+.+++.+.++... + +.... ..+....+++.+...... .+++.+ +
T Consensus 36 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~-~-~~~~~-~~~~~~~la~~L~~~~~~---~~~v~f--~ 104 (408)
T PRK04612 36 DDQGR-EYLDLAAGIAVCGLGH--NDPDLVAALTEQAGKLW-H-TSNVF-YSAPPLKLAEELVTASRF---AEKVFL--C 104 (408)
T ss_pred ECCCC-EEEEcCccHhhccCCC--CCHHHHHHHHHHHHhcc-c-ccccc-CCHHHHHHHHHHHhhCCC---CCEEEE--c
Confidence 33443 7888876642222222 24455555555443211 1 11111 122334455554432211 268877 9
Q ss_pred cchhHHHHHHHHHHHHhC------CC-CEEEEcCCCCcchHHHHh-hCCCCeEE---EecccC--CCCCCCHHHHHHHHH
Q 017967 158 LSGTGSLRLAAALIERYF------PG-AKVLISSPTWGNHKNIFN-DARVPWSE---YRYYDP--KTVGLDFEGMIADIK 224 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~------~g-d~Vlv~~P~y~~~~~~~~-~~G~~~~~---v~~~~~--~~~~~d~~~l~~~l~ 224 (363)
.+|++|.+.+..+...+. ++ .+|+...-+|.+...... ..|..... .+..+. .-...|++.+++.+.
T Consensus 105 ~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 184 (408)
T PRK04612 105 NSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA 184 (408)
T ss_pred CchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC
Confidence 999999999977655541 22 368888888866643222 22211000 000000 001237888888885
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCC--HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s--~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
. ..+..++..|.+++|.+++ .+.+++|.++|+++|+++|+||+|.+|...+ ..... ...+.+..+.+|
T Consensus 185 ~---~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~a~----~~~~~~pdi~t~ 254 (408)
T PRK04612 185 G---GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TLFAH----WQEQVTPDIVTL 254 (408)
T ss_pred C---CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---chhhh----hhcCCCCCEEEE
Confidence 2 3455556788899987766 5689999999999999999999999886543 11111 122446678899
Q ss_pred ccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
||.++ +|+|+||+ +++ ++ +.+.+........++.+++++.++...|+.
T Consensus 255 ~K~l~-~G~piga~--~~~-~~----~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~ 302 (408)
T PRK04612 255 AKALG-GGFPIGAM--LAG-PK----VAETMQFGAHGTTFGGNPLAAAVARVALRK 302 (408)
T ss_pred cchhc-CCCceEEE--EEC-HH----HHhhhcCCCcCCCCCCCHHHHHHHHHHHHH
Confidence 99998 89999999 666 55 444444333344456778888888776654
No 235
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.50 E-value=2.9e-12 Score=123.35 Aligned_cols=203 Identities=12% Similarity=-0.014 Sum_probs=127.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc---------CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~---------~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
..++|+...|.+...++.+.+.+.+++.....+ +...-++...-+.++++.+|+++... ..+++
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-------~~l~~ 77 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-------EAFIV 77 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-------eEEEE
Confidence 689999999998888887888888887665311 00011112334678999999997442 33444
Q ss_pred EeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcE
Q 017967 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSF 231 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~ 231 (363)
+.|. .+...+ +.....+||.|++..-.+......++......+.++ ..|++.+++.++... ++++
T Consensus 78 --~sG~-~a~~~~--~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~ 145 (370)
T PRK05937 78 --PSGY-MANLGL--CAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGRI 145 (370)
T ss_pred --CChH-HHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCcE
Confidence 5554 443222 222234777777766666666665554433333332 368999999887421 2456
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~ 311 (363)
++++++++|+||...+. ++|.++|+++|+++++||++..-..+. +...........+..+.+.||||.+|..|.
T Consensus 146 ~v~v~~v~s~~G~i~pl---~eI~~l~~~~~~~livDea~~~G~~g~---~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~ 219 (370)
T PRK05937 146 FIFVCSVYSFKGTLAPL---EQIIALSKKYHAHLIVDEAHAMGIFGD---DGKGFCHSLGYENFYAVLVTYSKALGSMGA 219 (370)
T ss_pred EEEEecCCCCCCCccCH---HHHHHHHHHcCCEEEEECCccccccCC---CCCchHHhhCCCCCcEEEEechhhhhcCce
Confidence 77789999999999985 456667999999999999987533321 111111111111223568999999997773
No 236
>PLN00144 acetylornithine transaminase
Probab=99.49 E-value=1.8e-12 Score=125.18 Aligned_cols=236 Identities=13% Similarity=0.017 Sum_probs=138.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.-...-|+- .+.+.+++.+.+.... +.......+....+|+.+..... .+++.+ +.+|++|
T Consensus 16 ~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~f--~~sGseA 84 (382)
T PLN00144 16 EYLDMAAGIAVNALGHG--DPDWVKAVAEQAGTLA---HVSNVYHTIPQVELAKRLVASSF----ADRVFF--CNSGTEA 84 (382)
T ss_pred EEEECCcCHHhccCCCC--CHHHHHHHHHHHHhcC---CccccccCHHHHHHHHHHHhcCC----CCeEEE--eCCcHHH
Confidence 67888666421112222 3455555555443211 11111112233444444433211 358877 9999999
Q ss_pred HHHHHHHHHHhCC-------------CCEEEEcCCCCcchHHHHhh-CCCC------------eEEEecccCCCCCCCHH
Q 017967 164 LRLAAALIERYFP-------------GAKVLISSPTWGNHKNIFND-ARVP------------WSEYRYYDPKTVGLDFE 217 (363)
Q Consensus 164 l~l~~~l~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~-~G~~------------~~~v~~~~~~~~~~d~~ 217 (363)
.+.+..+...... ..+|+...-+|.+....... .+-. +..+|. .|++
T Consensus 85 ~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~ 157 (382)
T PLN00144 85 NEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-------GNLE 157 (382)
T ss_pred HHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-------CCHH
Confidence 9998766544321 24688888888666433221 1111 112221 2688
Q ss_pred HHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHH--HHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe
Q 017967 218 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ--WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (363)
Q Consensus 218 ~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~--~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 295 (363)
.+++.+.. .+...+++-+. +|| |.+++.+. +++|.++|++||+++|+||+|.+|...+. .++. ......++
T Consensus 158 ~l~~~~~~-~~~aavi~eP~-q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~---~~~~-~~~~~~PD 230 (382)
T PLN00144 158 AARKLIQK-GKTAAVFVEPV-QGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY---LWAH-EAYGVEPD 230 (382)
T ss_pred HHHHhcCC-CCeEEEEEccc-cCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch---Hhhh-hhcCCCCC
Confidence 89888753 22234455444 899 55555555 99999999999999999999999865431 2221 11122233
Q ss_pred EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcc
Q 017967 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSS 355 (363)
Q Consensus 296 vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~ 355 (363)
+.+|||.++ +|+|+||+ +++ ++ +.+.+........++.+++++.++...
T Consensus 231 ---i~t~sK~l~-~G~pig~v--~~~-~~----~~~~~~~~~~~~T~~~~pl~~aaa~a~ 279 (382)
T PLN00144 231 ---IMTLAKPLA-GGLPIGAV--LVT-EK----VASAINPGDHGSTFAGGPLVCNAALAV 279 (382)
T ss_pred ---EEEeccccc-CCcceEEE--EEc-HH----HHhccCCCCCCCCCCCCHHHHHHHHHH
Confidence 788999998 89999999 776 55 455444333444557888888888733
No 237
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.49 E-value=4.2e-12 Score=123.39 Aligned_cols=236 Identities=14% Similarity=0.124 Sum_probs=139.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-.+.-|. -.|.+.+++.+.++... ...| +..-..+|.+.++++. + .+++.+ +++|+
T Consensus 36 ~ylD~~~g~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~----~~~~~f--~~SGs 102 (397)
T TIGR03246 36 EYIDFAGGIAVNALGH--AHPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT----F----ADKVFF--CNSGA 102 (397)
T ss_pred EEEECCcCHhhccCCC--CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCCcH
Confidence 7889877632122333 24556666555443211 1112 1222345555555542 1 257877 99999
Q ss_pred HHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCCC------------CeEEEecccCCCCCCCHHHHHHH
Q 017967 162 GSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 162 ~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
+|.+.+..+...+. +| ++|+..+-+|.+... .+...|. .+..++ ..|++.+++.
T Consensus 103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~ 175 (397)
T TIGR03246 103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-------YNDLAAAKAL 175 (397)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-------CCCHHHHHHH
Confidence 99999976654442 33 567777777766532 2222221 111222 2378999988
Q ss_pred HHcCCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 223 IKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
+. ++..++++...+++.|... +.+.+++|.++|++||+++|.||+|.++...+ .......+ .-..++ -+
T Consensus 176 l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G---~~~a~~~~-gv~pDi---~t 245 (397)
T TIGR03246 176 IS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHY-GVTPDI---LT 245 (397)
T ss_pred hc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc---cchhhhhc-CCCCCE---EE
Confidence 86 2455666554444455443 89999999999999999999999998885432 12221111 112233 37
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|||.+| .|+++||+ +++ ++ +.+.+........++.+++++.++...|+
T Consensus 246 ~~K~lg-gG~pigav--~~~-~~----i~~~~~~~~~~~t~~~~p~~~aaa~a~l~ 293 (397)
T TIGR03246 246 SAKALG-GGFPIGAM--LTT-TE----IAAHLKVGTHGTTYGGNPLACAVAGKVLD 293 (397)
T ss_pred eehhhh-CCcceeEE--EEc-HH----HHHhccCCCcCCCCCCCHHHHHHHHHHHH
Confidence 899998 89999999 665 55 45545433233334566777777765554
No 238
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.48 E-value=7.9e-12 Score=121.65 Aligned_cols=243 Identities=11% Similarity=0.109 Sum_probs=146.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
..+|+..|......| +-.+.+.+++.+.++. ..........-..++.+.+++++ + .+++.+ +++|++
T Consensus 38 ~~lD~~s~~~~~~~G--h~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~SGs~ 105 (401)
T TIGR01885 38 RYLDFLSAYSAVNQG--HCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF-G-------YDKVLP--MNTGAE 105 (401)
T ss_pred EEEEcccCHhhccCC--CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc-C-------CCEEEE--eCccHH
Confidence 688887763211111 1245666666555432 11011112233456666776663 2 257777 999999
Q ss_pred HHHHHHHHHHHh-------CCC-CEEEEcCCCCcch-HHHHhhCC---------C---CeEEEecccCCCCCCCHHHHHH
Q 017967 163 SLRLAAALIERY-------FPG-AKVLISSPTWGNH-KNIFNDAR---------V---PWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 163 al~l~~~l~~~~-------~~g-d~Vlv~~P~y~~~-~~~~~~~G---------~---~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
|.+.+..+.... .+| +.|+...-.|.+. ...+...| . .+..++. .|++.+++
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 178 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE 178 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence 999886554333 133 5677777777643 33332221 1 1222322 26899999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHH-HHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~-~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
.+++.+++..++++...++++|...+.+ .+++|.++|++||+++|+||+|.++...+ ..... ......++++
T Consensus 179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~-~~~~~~~di~--- 251 (401)
T TIGR01885 179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCV-DHENVKPDIV--- 251 (401)
T ss_pred HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHH-hhcCCCCCEE---
Confidence 8875444566777778899999998654 69999999999999999999998876542 11121 2212233444
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.|||.++..|+|+||+ +++ ++ +++.+.........+.+++++.++...|+..
T Consensus 252 ~~gK~l~~g~~~ig~v--~~~-~~----i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i 303 (401)
T TIGR01885 252 LLGKALSGGVYPVSAV--LAD-DD----VMLTIKPGEHGSTYGGNPLACAVAVAALEVL 303 (401)
T ss_pred EeeccccCCCCCcEEE--EEc-HH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3679998666999999 665 66 4444443223334456788888877666543
No 239
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.48 E-value=9.6e-12 Score=121.58 Aligned_cols=162 Identities=18% Similarity=0.129 Sum_probs=116.2
Q ss_pred CCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----H
Q 017967 121 EYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----F 194 (363)
Q Consensus 121 ~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~ 194 (363)
.|.. ......|.+.+|++... +..++ +.+|++|+.++ +..++.+||+|++....|.+.... +
T Consensus 62 ~Ysr~~~p~~~~Le~~lA~l~g~--------~~av~--~sSG~aAi~~a--l~all~~Gd~Vv~~~~~y~~t~~~~~~~l 129 (436)
T PRK07812 62 IYTRIMNPTQDVVEQRIAALEGG--------VAALL--LASGQAAETFA--ILNLAGAGDHIVSSPRLYGGTYNLFHYTL 129 (436)
T ss_pred cccCCCCchHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEeCCcchHHHHHHHHHh
Confidence 3543 34457889999988533 23444 78999998877 566678999999999888776543 3
Q ss_pred hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCC
Q 017967 195 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF 274 (363)
Q Consensus 195 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~ 274 (363)
...|++++.++ +. .|++.++++++ ++++++++.+|+||+|.+.+. ++|.++|+++|+++|+|+++..-
T Consensus 130 ~~~Gi~v~~vd--d~----~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~Dl---~~I~~la~~~gi~liVD~t~a~~ 197 (436)
T PRK07812 130 PKLGIEVSFVE--DP----DDLDAWRAAVR---PNTKAFFAETISNPQIDVLDI---PGVAEVAHEAGVPLIVDNTIATP 197 (436)
T ss_pred hcCeEEEEEEC--CC----CCHHHHHHhCC---CCCeEEEEECCCCCCCeecCH---HHHHHHHHHcCCEEEEECCCccc
Confidence 45788777774 11 38899998886 346788889999999998865 55666799999999999986532
Q ss_pred cCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 275 ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
... .+ ++.+.+ +++.|++|.+|-.|--+|+++
T Consensus 198 ~~~------~p----l~~GaD-ivv~S~tK~lgg~G~~i~G~v 229 (436)
T PRK07812 198 YLI------RP----LEHGAD-IVVHSATKYLGGHGTAIAGVI 229 (436)
T ss_pred ccC------Cc----hhcCCC-EEEEecccccCCCCCeEEEEE
Confidence 211 01 122233 566999999987776688873
No 240
>PLN02624 ornithine-delta-aminotransferase
Probab=99.48 E-value=8e-12 Score=123.87 Aligned_cols=243 Identities=12% Similarity=0.099 Sum_probs=147.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-....|+ -.+.+.+++.+.++.. ....+.......+|.+.+++++ . .+++.+ +++|++
T Consensus 76 ~ylD~~sg~~~~~~Gh--~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~-------~~~~~f--~~SGse 143 (474)
T PLN02624 76 KYLDFLSAYSAVNQGH--CHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-G-------YDMVLP--MNTGAE 143 (474)
T ss_pred EEEEcccchhcccCCC--CCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-C-------CCeEEE--eCChHH
Confidence 7888876632111121 2455555655544321 1011112344566777777763 1 257777 899999
Q ss_pred HHHHHHHHHHHhC------C-CC-EEEEcCCCCcchHHHH-hhCCC------------CeEEEecccCCCCCCCHHHHHH
Q 017967 163 SLRLAAALIERYF------P-GA-KVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 163 al~l~~~l~~~~~------~-gd-~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
|.+.+..+..... + ++ .|+...-+|.+..... ...|- .+..++. .|++.+++
T Consensus 144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 216 (474)
T PLN02624 144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEK 216 (474)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHH
Confidence 9999866554431 1 33 4666666665542221 11110 1122222 26889999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHH-HHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
.++..+.+..++++..++|++|.+++.++ +++|.++|++||+++|+||+|.++...+ ..... ......+++++
T Consensus 217 ~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG---~~~a~-~~~~i~pDiv~-- 290 (474)
T PLN02624 217 IFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG---KMLAC-DWEEVRPDVVI-- 290 (474)
T ss_pred HHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc---chhhH-HhcCCCCCEEE--
Confidence 88765556778888999999999988775 9999999999999999999998875442 11111 11122233333
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
|||.+|..++++|++ +.+ ++ +...+........++.+++.+.++...|+..
T Consensus 291 -lsK~lggG~~pigav--~~~-~~----i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l 341 (474)
T PLN02624 291 -LGKALGGGVIPVSAV--LAD-KD----VMLCIKPGEHGSTFGGNPLASAVAMAALQVV 341 (474)
T ss_pred -ecccccCCCCcceee--eec-HH----HHhHhccCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 689999766999999 664 55 4444443333334467778888877666543
No 241
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.47 E-value=8e-12 Score=120.25 Aligned_cols=190 Identities=12% Similarity=0.021 Sum_probs=135.1
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~ 200 (363)
.+....|.+.+|++- +- +..++ +.+|++|+..+ ++.++.+||+|+++...|.+....+ ++.|++
T Consensus 61 nPt~~~le~~la~LE-g~-------~~a~~--~~SGmaAi~~~--~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~ 128 (395)
T PRK08114 61 TLTHFSLQEAMCELE-GG-------AGCAL--YPCGAAAVANA--ILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVT 128 (395)
T ss_pred ChhHHHHHHHHHHHh-CC-------CeEEE--EhHHHHHHHHH--HHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcE
Confidence 445677888898873 31 45555 78999999887 5666889999999999997776654 678999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc--CCeEEEecCCCCCcCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGS 278 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~De~y~~~~~~~ 278 (363)
+..++. .|.+.+++++++ +++++++-+|.||||.+.+ +++|+++|+++ |+++++|.++..-..-+
T Consensus 129 v~~vd~-------~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~ 195 (395)
T PRK08114 129 TTWFDP-------LIGADIAKLIQP---NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVLFK 195 (395)
T ss_pred EEEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccccC
Confidence 888763 367889998873 5678888999999998875 56677778887 49999999975432211
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ .+ ..-.++++|.+|.++-.| .-.|.+ +.+++.. +.+...........+++...++.+.|+
T Consensus 196 ------p----l~-~GaDivv~S~tKyl~Ghsdv~~G~v---~~~~~~~----~~l~~~~~~~G~~~~p~~a~l~~rgl~ 257 (395)
T PRK08114 196 ------A----LD-FGIDISIQAGTKYLVGHSDAMIGTA---VANARCW----EQLRENSYLMGQMVDADTAYMTSRGLR 257 (395)
T ss_pred ------H----HH-cCCcEEEEcCcccccCCCcceeEEE---EcCHHHH----HHHHHHHHhccCCCCHHHHHHHHcCCC
Confidence 1 11 134588999999886555 456644 4445533 333333334566888888888877665
No 242
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.46 E-value=3.1e-12 Score=120.74 Aligned_cols=202 Identities=15% Similarity=0.082 Sum_probs=146.0
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHH----ccCC-C-CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLML----ERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~----~~~~-~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
.+.+.|..+.. .+..+.|.+++.... ...+ . +.+.+..+..+.|+.+|++++.. +.+|++
T Consensus 42 ~~~vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~dIiF-- 107 (428)
T KOG1549|consen 42 TRPVYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSDIVF-- 107 (428)
T ss_pred CccEEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCcEEE--
Confidence 36777776653 334455555554433 2222 1 23334556889999999998765 567988
Q ss_pred ccchhHHHHHHHHHHHHhCCCC----EEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 157 GLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd----~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.|+|++++++..-.. ...+| .|++..-.|+..... ++..|++++.+|+. +++-.|++.|++.++ ++
T Consensus 108 ts~ATEs~Nlvl~~v~-~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~---~~ 181 (428)
T KOG1549|consen 108 TSGATESNNLVLKGVA-RFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIR---SK 181 (428)
T ss_pred eCCchHHHHHHHHHhh-ccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcC---CC
Confidence 9999999999943221 23666 899998888776554 45789999999994 567889999999998 46
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++.+..-+|-+|+.++.+| |.++|+++++++++|.+ +....-. ..+..+ .-.++..|..|.||.+
T Consensus 182 T~lv~I~~Vnn~~gv~~Pv~E---I~~icr~~~v~v~~DaA-QavG~i~-----vDV~el----n~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVLQPVKE---IVKICREEGVQVHVDAA-QAVGKIP-----VDVQEL----NADFLSISAHKIYGPP 248 (428)
T ss_pred ceEEEEEecccCccccccHHH---HHHHhCcCCcEEEeehh-hhcCCcc-----ccHHHc----CchheeeecccccCCC
Confidence 889999999999999998665 55579999999999999 4444321 122222 4457788889999999
Q ss_pred cccceEEEEe
Q 017967 310 AERIGAMNVV 319 (363)
Q Consensus 310 G~RvG~i~~v 319 (363)
| +|++++-
T Consensus 249 ~--iGaLYvr 256 (428)
T KOG1549|consen 249 G--IGALYVR 256 (428)
T ss_pred c--ceEEEEc
Confidence 9 8999544
No 243
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.46 E-value=4.8e-12 Score=119.70 Aligned_cols=191 Identities=21% Similarity=0.135 Sum_probs=134.5
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEE
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vl 181 (363)
+-+...+++.+.+..+. +....-..+|.+++++|+.. .+.+. +++||.|++++...+. +.|||.|+
T Consensus 13 i~~~e~~~v~~vl~sg~---i~~G~~v~~FE~~~ae~~G~--------k~ava--~~sgT~AL~laL~al~-ig~GDeVI 78 (374)
T COG0399 13 IGEEELAAVQEVLKSGW---LTGGPFVRRFEQAFAEYLGV--------KYAVA--VSSGTAALHLALLALA-IGPGDEVI 78 (374)
T ss_pred cchHHHHHHHHHHHcCC---eecChHHHHHHHHHHHHhCC--------CeEEE--ecChHHHHHHHHHhcC-CCCCCEEE
Confidence 34555666666665543 22233457899999999644 45555 8999999999944333 67999999
Q ss_pred EcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 182 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
+++-+|....+.+...|.+++.++++ ++++.+|++.+|++++++ .+.++.+.-..||. ++++|.++|++|
T Consensus 79 ~ps~TfvATan~i~~~Ga~PVFvDid-~~T~nid~~~ie~aIt~~--tKAIipVhl~G~~~-------dm~~i~~la~~~ 148 (374)
T COG0399 79 VPSFTFVATANAVLLVGAKPVFVDID-PDTLNIDPDLIEAAITPR--TKAIIPVHLAGQPC-------DMDAIMALAKRH 148 (374)
T ss_pred ecCCchHHHHHHHHHcCCeEEEEecC-CcccCCCHHHHHHHcccC--CeEEEEehhccCCC-------CHHHHHHHHHHc
Confidence 99999999999999999999999995 568999999999999952 33344444456653 678888889999
Q ss_pred CCeEEEecCCCCCc--CCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHH
Q 017967 262 NHIPFFDVAYQGFA--SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 262 ~~~ii~De~y~~~~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
|++||+|.+ +.+. +.+ ..+ ...++-..+.+=-+|.++ +| --|.+ ++.|++.++++
T Consensus 149 ~l~vIEDaA-qa~Ga~y~g-----k~v---Gt~Gd~~~fSF~~~K~it-tg-EGGav--~tnd~ela~k~ 205 (374)
T COG0399 149 GLPVIEDAA-QAHGATYKG-----KKV---GSFGDIGAFSFHATKNLT-TG-EGGAV--VTNDEELAEKA 205 (374)
T ss_pred CCeEEEEcc-hhccCeecC-----ccc---ccccceEEEEecCCCCcc-cc-CceEE--EeCCHHHHHHH
Confidence 999999999 3332 221 011 122233333334489998 67 46888 77777754444
No 244
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.46 E-value=8.1e-12 Score=122.21 Aligned_cols=255 Identities=11% Similarity=0.044 Sum_probs=144.2
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+++ .++|+..|.-...-|+ -.+.+.+++.+.+.......+ .+..-..+|-+.+++..-. -..+++.+
T Consensus 29 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~-----~~~~~v~f- 99 (420)
T TIGR00700 29 DVDGN-RLIDFASGIAVLNIGH--SHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPG-----SGPKKSVF- 99 (420)
T ss_pred eCCCC-EEEECccCHHhccCCC--CCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCC-----CCCCEEEE-
Confidence 34443 7888876642221222 234555565555433111111 1222223444444443211 01257777
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC--------C-----CeEEEecccCCC---------C
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDPKT---------V 212 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G--------~-----~~~~v~~~~~~~---------~ 212 (363)
+.+|++|.+.+..+........+|+...-+|.+....... .| . .+..++..+... +
T Consensus 100 -~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (420)
T TIGR00700 100 -FNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLST 178 (420)
T ss_pred -eCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhH
Confidence 8999999999977655554446788888888665332211 11 1 122232210000 0
Q ss_pred CCCHHHHHHHHH--cCCCCcEEEEEcCCCCCCCCCCCHHH-HHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 213 GLDFEGMIADIK--AAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 213 ~~d~~~l~~~l~--~~~~~~~~~~i~~p~NPTG~~~s~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
.-+++.+++.+. ..++....+++-.-+.-+|..++.++ +++|.++|++||+++|+||+|.+|...+ ...+...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~~ 255 (420)
T TIGR00700 179 DGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEHE 255 (420)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhhc
Confidence 012456666653 22344555555444556788775555 9999999999999999999999997643 12222221
Q ss_pred HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
...++ +.+|||.++ +|+|+||+ +++ ++ +.+.+........++.++++|.++...|+
T Consensus 256 -~~~pD---i~~lsK~l~-~G~pig~v--~~~-~~----i~~~~~~~~~~~T~~~~pl~~aaa~a~l~ 311 (420)
T TIGR00700 256 -GPEPD---LITTAKSLA-DGLPLSGV--TGR-AE----IMDAPAPGGLGGTYAGNPLACAAALAVLA 311 (420)
T ss_pred -CCCCC---EEEeecccc-CCcceEEE--Eec-HH----HHhhcCCCCcCCCCCcCHHHHHHHHHHHH
Confidence 11223 445999999 99999999 665 65 55555433344555788899988855543
No 245
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.46 E-value=6.9e-12 Score=120.43 Aligned_cols=196 Identities=19% Similarity=0.193 Sum_probs=132.9
Q ss_pred CCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh--
Q 017967 120 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-- 195 (363)
Q Consensus 120 ~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-- 195 (363)
+.|+. ......|.+.+++...+ +.+++ +++|.+|+..+ ++.++.+||+|+++...|.+....++
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g--------~~a~~--~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~ 114 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGG--------EDALL--FSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEEL 114 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT---------SEEEE--ESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHHC
T ss_pred cceeccccccHHHHHHHHHHhhcc--------cceee--ccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhhh
Confidence 44533 44556788899888533 46666 89999998777 67778899999999999988877665
Q ss_pred --hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC-CeEEEecCCC
Q 017967 196 --DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQ 272 (363)
Q Consensus 196 --~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~-~~ii~De~y~ 272 (363)
..|+++..++. -|++++++++++ +++++++-+|.||+..+ .++++|+++|+++| +++|+|+.|.
T Consensus 115 l~~~gv~v~~~d~-------~d~~~l~~~l~~---~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~a 181 (386)
T PF01053_consen 115 LPRFGVEVTFVDP-------TDLEALEAALRP---NTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFA 181 (386)
T ss_dssp HHHTTSEEEEEST-------TSHHHHHHHHCT---TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTT
T ss_pred hcccCcEEEEeCc-------hhHHHHHhhccc---cceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeecccc
Confidence 57999888754 478999999983 67888889999999655 56778888899998 9999999986
Q ss_pred CCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc-ceEEEEeeCC-hhHHHHHHHHHHhhhccccCCCchHHHH
Q 017967 273 GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSS-SDLAARVKSQLKRLARPMYSNPPPMLLG 350 (363)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R-vG~i~~v~~~-~~~~~~~~~~l~~~~~~~~~~~s~~~q~ 350 (363)
....-. + ++. .-.+++.|.+|.++-.|-- .|.+ ++.+ ++ +.+.++..........++....
T Consensus 182 tp~~~~------p----L~~-GaDivv~S~TKyl~Ghsdv~~G~v--v~~~~~~----~~~~l~~~~~~~G~~~~p~da~ 244 (386)
T PF01053_consen 182 TPYNQN------P----LEL-GADIVVHSATKYLSGHSDVMGGAV--VVNGSSE----LYDRLREFRRLLGATLSPFDAW 244 (386)
T ss_dssp HTTTC-------G----GGG-T-SEEEEETTTTTTTSSSE-EEEE--EESSHHH----HHHHHHHHHHHHT-B--HHHHH
T ss_pred ceeeec------c----CcC-CceEEEeeccccccCCcceeeEEE--EECchhh----hhhhhcchhhhcCccchHHHHH
Confidence 543221 1 122 2458899999998633333 4555 4444 45 3444444444445577777777
Q ss_pred HHhcccc
Q 017967 351 IQLSSMN 357 (363)
Q Consensus 351 ~~~~~l~ 357 (363)
++.+.|+
T Consensus 245 ll~rgl~ 251 (386)
T PF01053_consen 245 LLLRGLR 251 (386)
T ss_dssp HHHHHHT
T ss_pred HHhcCCC
Confidence 7766554
No 246
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.45 E-value=1.3e-11 Score=120.69 Aligned_cols=253 Identities=15% Similarity=0.120 Sum_probs=148.1
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
.+++ .++|+..|.-...-|+ -.+.+.+++.+.++......+ .+.....+|-+.+++..-. -..+++.+
T Consensus 37 ~dG~-~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~-----~~~~~~~f-- 106 (421)
T PRK06777 37 VEGR-EYIDFAAGIAVLNTGH--RHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPI-----DGPAKTAF-- 106 (421)
T ss_pred CCCC-EEEEcccCHHhhccCC--CCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCC-----CCCceEEE--
Confidence 3443 7888876642111122 234555555554433111111 1222233444444444210 01257777
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCC-------------CeEEEecccCCCCC----CCHHH
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV-------------PWSEYRYYDPKTVG----LDFEG 218 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~-------------~~~~v~~~~~~~~~----~d~~~ 218 (363)
+.+|++|.+.+..+........+|+...-+|.+...... ..|. .+..++..+. ..+ -+++.
T Consensus 107 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~ 185 (421)
T PRK06777 107 FTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSS 185 (421)
T ss_pred eCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHH
Confidence 889999999997765554434678888888866643322 1121 0112222110 111 13566
Q ss_pred HHHHHHc--CCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe
Q 017967 219 MIADIKA--APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (363)
Q Consensus 219 l~~~l~~--~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 295 (363)
+++.+.. .+++...+++-..++..|. .++.+.+++|.++|+++|+++|+||+|.+|...+ ..+....+ +..++
T Consensus 186 l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g---~~~~~~~~-~~~pD 261 (421)
T PRK06777 186 VERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG---KLFAMEYY-DVKPD 261 (421)
T ss_pred HHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC---chhhhhhc-CCCCC
Confidence 7777753 2344556665556778885 5789999999999999999999999999986543 12232222 22234
Q ss_pred EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 296 vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++ +|||.++ +|+|+||+ +++ ++ +++.+........++.++++|.++...|+
T Consensus 262 iv---~~sK~l~-~G~pigav--~~~-~~----i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 262 LI---TMAKSLG-GGMPISAV--VGR-AE----VMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred EE---eeehhhc-CCCceEEE--EEc-HH----HHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 33 6999999 99999999 665 66 55555433344455778899998877775
No 247
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.44 E-value=6.2e-12 Score=120.75 Aligned_cols=189 Identities=21% Similarity=0.110 Sum_probs=122.0
Q ss_pred HHHHHHHHHHccCCCCCCCC-CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEc
Q 017967 105 VVKKAENLMLERGENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLIS 183 (363)
Q Consensus 105 ~v~~a~~~~~~~~~~~~Y~~-~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~ 183 (363)
...+++.+.+..+. +.. ..-..+|.+++++++.. ++++. +.+||.|+.++...+ -+.+||+|+++
T Consensus 6 e~~~~v~~~l~s~~---~~~~g~~~~~fE~~~a~~~g~--------~~~~~--~~sgt~Al~~al~~l-~~~~gdeVi~p 71 (363)
T PF01041_consen 6 EEIDAVLEVLRSGW---LSTYGPYVEEFEKEFAEYFGV--------KYAVA--VSSGTSALHLALRAL-GLGPGDEVIVP 71 (363)
T ss_dssp HHHHHHHHHHHHTC---CSSSSHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHHT-TGGTTSEEEEE
T ss_pred HHHHHHHHHHHhCC---ccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCChhHHHHHHHHhc-CCCcCceEecC
Confidence 33445555554433 222 44568999999999743 57766 899999999984332 13499999999
Q ss_pred CCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 017967 184 SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (363)
Q Consensus 184 ~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~ 263 (363)
..+|......+...|++++.++++ ++++.+|++.+++.+++ +++++++.+ .-|.. .++.+|.++|+++|+
T Consensus 72 ~~t~~~~~~ai~~~G~~pv~~Di~-~~~~~id~~~~~~~i~~---~t~ai~~~h---~~G~~---~d~~~i~~~~~~~~i 141 (363)
T PF01041_consen 72 AYTFPATASAILWAGAEPVFVDID-PETLNIDPEALEKAITP---KTKAILVVH---LFGNP---ADMDAIRAIARKHGI 141 (363)
T ss_dssp SSS-THHHHHHHHTT-EEEEE-BE-TTTSSB-HHHHHHHHHT---TEEEEEEE----GGGB------HHHHHHHHHHTT-
T ss_pred CCcchHHHHHHHHhccEEEEEecc-CCcCCcCHHHHHHHhcc---CccEEEEec---CCCCc---ccHHHHHHHHHHcCC
Confidence 999999999999999999999996 57899999999999984 344444333 22332 378889999999999
Q ss_pred eEEEecCCCCCcC-CCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHH
Q 017967 264 IPFFDVAYQGFAS-GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 264 ~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
++|+|.+-.-... .+ ..+ ...++-.++...-+|.+. .|. -|.+ ++.+++..+++
T Consensus 142 ~lIeD~a~a~g~~~~g-----~~~---G~~gd~~~fSf~~~K~i~-~ge-GG~v--~~~~~~~~~~~ 196 (363)
T PF01041_consen 142 PLIEDAAQAFGARYKG-----RPV---GSFGDIAIFSFHPTKIIT-TGE-GGAV--VTNDPELAERA 196 (363)
T ss_dssp EEEEE-TTTTT-EETT-----EET---TSSSSEEEEESSTTSSS--SSS--EEE--EESTHHHHHHH
T ss_pred cEEEccccccCceeCC-----Eec---cCCCCceEecCCCCCCCc-CCC-CeeE--EecHHHHHHHh
Confidence 9999999443221 11 010 122333333334489985 565 5888 78888744444
No 248
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.44 E-value=1.7e-11 Score=118.18 Aligned_cols=207 Identities=11% Similarity=0.084 Sum_probs=138.2
Q ss_pred HHHHHH-HHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEE
Q 017967 104 DVVKKA-ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (363)
Q Consensus 104 ~~v~~a-~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv 182 (363)
..++++ +..+... . ..|.......+|.+++++++.. ++++. +.+|+.|+++++ ...+.|||.|
T Consensus 50 ~aMs~~q~a~~~~G-D-e~yag~~s~~~lE~~va~~~G~--------~~av~--v~sGT~Al~ll~--~l~l~pGDeV-- 113 (450)
T TIGR02618 50 NAMSDKQWAGLMMG-D-EAYAGSRNFYHLERTVRELYGF--------KYVVP--THQGRGAENLLS--QIAIKPGDYV-- 113 (450)
T ss_pred HHHHHHHHHHhhhc-c-hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--cCCHHHHHHHHH--HhCCCCcCEE--
Confidence 566666 5544422 2 3598888899999999999633 56767 999999999873 3346799977
Q ss_pred cCCCCcc-hHHHHhhCCCCeEEEecc--------cCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCCC-CCCCCCCHHHH
Q 017967 183 SSPTWGN-HKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHN-PTGIDPTPEQW 251 (363)
Q Consensus 183 ~~P~y~~-~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~N-PTG~~~s~~~~ 251 (363)
+.++|.. ....++..|..++.++.+ ++.++.+|++.+++.+++.. ....++.+.+++| ..|..++.+++
T Consensus 114 psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l 193 (450)
T TIGR02618 114 PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANM 193 (450)
T ss_pred CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHH
Confidence 6677744 444478889877776543 24468899999999998522 1233555566777 55899999999
Q ss_pred HHHHHHHHhcCCeEEEecCCCC----CcCC-CCCCchhHH----HHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 252 EKIADVIQEKNHIPFFDVAYQG----FASG-SLDNDASSV----RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 252 ~~i~~~~~~~~~~ii~De~y~~----~~~~-~~~~~~~~~----~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
++|.++|+++|+.+++|.+-.- |... +......++ +.+.+..+- +..|..|.++.+- -|++ .+.+
T Consensus 194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~--~~~S~~Kd~~~~~--GG~l--~~~d 267 (450)
T TIGR02618 194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADG--CTMSGKKDCLVNI--GGFL--CMND 267 (450)
T ss_pred HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcE--EEEeeccCCCCCC--ceEE--EeCC
Confidence 9999999999999999998432 1100 000011123 333333333 7889999887661 2444 4467
Q ss_pred hhHHHHHHHH
Q 017967 323 SDLAARVKSQ 332 (363)
Q Consensus 323 ~~~~~~~~~~ 332 (363)
++.++++.+.
T Consensus 268 ~~l~~k~r~~ 277 (450)
T TIGR02618 268 DEMFQSAKEL 277 (450)
T ss_pred HHHHHHHHHH
Confidence 8855554443
No 249
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.43 E-value=1.4e-11 Score=121.52 Aligned_cols=255 Identities=13% Similarity=0.056 Sum_probs=141.2
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+++ .+||+..|.-...-|+ -.+.+.+++.+.++...... ......+....+|+.+........ .+++.+ +.
T Consensus 51 ~dG~-~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~-~~~v~f--~~ 122 (451)
T PRK06918 51 VDGN-QYIDFAGAIGTINVGH--SHPKVKEALHKQVDQYIHTG--FNVMMYEPYIELAEKLAALAPGSF-DKKVLF--LN 122 (451)
T ss_pred CCCC-EEEEcCCchhhcCCCC--CCHHHHHHHHHHHHhccCcc--ccccccHHHHHHHHHHHHhCCCCC-CCEEEE--cC
Confidence 3443 6888876642222222 24456666655553311011 100112333444444433221100 157877 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CCC-------------CeEEEecccC--CCCCCC-------
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV-------------PWSEYRYYDP--KTVGLD------- 215 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~-------------~~~~v~~~~~--~~~~~d------- 215 (363)
+|++|.+.+..+.+.+....+|+...-+|.+....... .|- .+..+|..+. ...+..
T Consensus 123 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (451)
T PRK06918 123 SGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDF 202 (451)
T ss_pred CcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHH
Confidence 99999999977665554346788888888666432221 110 1222222100 001111
Q ss_pred -HHHHHHHHHc--CCCCcEEEEEcCCCCCC-CCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH
Q 017967 216 -FEGMIADIKA--APGGSFILLHGCAHNPT-GIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (363)
Q Consensus 216 -~~~l~~~l~~--~~~~~~~~~i~~p~NPT-G~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (363)
.+.+++.+.. .++ .+.-++..|-+.. |.+++ .+.+++|.++|+++|+++|+||+|.+|...+ ...+...+
T Consensus 203 ~~~~~~~~~~~~~~~~-~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~~~- 277 (451)
T PRK06918 203 MIEEFKNFFISEVAPE-TIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIEHF- 277 (451)
T ss_pred HHHHHHHHHHhhcCCC-ceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhHhc-
Confidence 1233433321 223 3444456776666 65454 4559999999999999999999999997643 12333333
Q ss_pred hcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 291 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 291 ~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+..++ +.+|||.++ +|+|+||+ +++ ++ +.+.+.........+.++++|.++...|+
T Consensus 278 ~v~pD---i~t~sK~l~-~G~pig~v--~~~-~~----i~~~~~~~~~~~T~~g~~l~~aaa~a~l~ 333 (451)
T PRK06918 278 DVVPD---LITVSKSLG-AGVPISGV--IGR-KE----IMDESAPGELGGTYAGSPLGCAAALAVLD 333 (451)
T ss_pred CCCCC---EEeeehhhc-CCCccEEE--EEc-HH----HHhccCCCCcCcCCCcCHHHHHHHHHHHH
Confidence 21123 448999999 99999999 776 55 55555433344556788899998655554
No 250
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=2.4e-11 Score=118.89 Aligned_cols=162 Identities=17% Similarity=0.103 Sum_probs=114.4
Q ss_pred CCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HH
Q 017967 120 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NI 193 (363)
Q Consensus 120 ~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~ 193 (363)
..|.. ......|++.++++... +..++ +.+|+.|+.++ ++.++.+||+|+++...|.... ..
T Consensus 61 ~~Y~r~~~pt~~~le~~la~l~g~-------~~~v~---fsSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~ 128 (437)
T PRK05613 61 PIYSRLTNPTVEALENRIASLEGG-------VHAVA---FASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVT 128 (437)
T ss_pred ceeeCccChHHHHHHHHHHHHhCC-------CeEEE---eCCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHH
Confidence 34543 33457888899888533 23443 57777887765 5556789999999999998774 34
Q ss_pred HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 194 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
++..|++++.++. . .|++.+++++++ +++++++..+.||+|.+.+ +++|.++|+++|+++|+|.++..
T Consensus 129 l~~~Gi~v~~vd~--~----~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~ 196 (437)
T PRK05613 129 LNRLGIEVTFVEN--P----DDPESWQAAVQP---NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIAT 196 (437)
T ss_pred HHhcCeEEEEECC--C----CCHHHHHHhCCc---cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcc
Confidence 5788999988872 2 278999998873 4556667789999997776 55666679999999999999643
Q ss_pred CcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
...- .+. +. .-.+++.|++|.++-.|--+|-+
T Consensus 197 g~~~------~p~----~~-GaDivv~S~~K~l~G~gd~~gG~ 228 (437)
T PRK05613 197 AALV------RPL----EL-GADVVVASLTKFYTGNGSGLGGV 228 (437)
T ss_pred cccc------ChH----Hh-CCCEEEeeccceecCCCcceeEE
Confidence 2211 111 12 23688899999998666666776
No 251
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.42 E-value=5.5e-11 Score=115.96 Aligned_cols=223 Identities=14% Similarity=0.066 Sum_probs=133.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
..++|+...|..-..+|.+.+.+.+++.+.... +...-++...-+.+|.+++|+|+.. +..++ .++|.
T Consensus 103 ~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--------e~all--~sSGy 172 (476)
T PLN02955 103 KLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--------EDCLV--CPTGF 172 (476)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--------CcEEE--ECChH
Confidence 679999988865444443334444443332110 0001111122347899999999633 45555 67777
Q ss_pred HHHHHHHHHHHH------------hCCCCEEEEcCCCCcchHHHHhhC----CCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 162 GSLRLAAALIER------------YFPGAKVLISSPTWGNHKNIFNDA----RVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 162 ~al~l~~~l~~~------------~~~gd~Vlv~~P~y~~~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
.|...+...+.. ...+|.|++-.-.+.....-++.. +++++.++ .-|++.|++.++.
T Consensus 173 ~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~-------HND~~~Le~~L~~ 245 (476)
T PLN02955 173 AANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR-------HCDMYHLNSLLSS 245 (476)
T ss_pred HHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC-------CCCHHHHHHHHHh
Confidence 765444222210 124456666666666666555544 45666554 3588999999976
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
.+....++++-.--++.|...+ +++|.++|++||.++|+||++..+..+..-. -....+--..+..|+++||||.
T Consensus 246 ~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~--G~~e~~g~~~di~ii~~TLsKA 320 (476)
T PLN02955 246 CKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGG--GVAEEFNCEADVDLCVGTLSKA 320 (476)
T ss_pred CCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCC--cHHHHhCCCCCCcEEEEeCccc
Confidence 5444556665556889999888 5556666899999999999998777653111 1122221124678999999999
Q ss_pred cccccccceEEEEeeCChhHHHHHHHHHHhhhc
Q 017967 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLAR 338 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~ 338 (363)
+|+.| |++ +++ ++ +++.++...+
T Consensus 321 ~G~~G---Gfi--~gs-~~----~~~~l~~~~~ 343 (476)
T PLN02955 321 AGCHG---GFI--ACS-KK----WKQLIQSRGR 343 (476)
T ss_pred hhccC---cee--ecH-HH----HHHHHHHhCC
Confidence 87654 888 554 66 4455554433
No 252
>PRK04311 selenocysteine synthase; Provisional
Probab=99.40 E-value=5.9e-11 Score=116.61 Aligned_cols=231 Identities=18% Similarity=0.151 Sum_probs=146.2
Q ss_pred hhHHHHHhcCCC---CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCC---cc--hHHHHHHHHHHHhcC
Q 017967 71 LGVSEAFKADTD---EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI---EG--LAAFNKVTAELLFGA 142 (363)
Q Consensus 71 ~~~~~~~~~~~~---~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---~G--~~~lr~aia~~l~~~ 142 (363)
..+.+.+..... ..+||.+--.+.++.+.+.+++.+.+++.+......+.+|.-. .| ...+++.+++++..
T Consensus 64 ~~~~~~~~~~~~~~lr~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga- 142 (464)
T PRK04311 64 AEVEARLAARARPSLRPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA- 142 (464)
T ss_pred HHHHHHHHhhccCCCcceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC-
Confidence 344444444333 2678876444555566677888888888777643222222111 12 35788888888533
Q ss_pred CCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcc------hHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 143 DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN------HKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 143 ~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~------~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
+..++ +++|+.|+.++ +..+.+||+|+++...+.. ....++..|++++.++.. ...++
T Consensus 143 -------e~a~v--v~sgtaAl~l~---l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~----~~t~~ 206 (464)
T PRK04311 143 -------EDALV--VNNNAAAVLLA---LNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT----NRTHL 206 (464)
T ss_pred -------CeEEE--ECCHHHHHHHH---HHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC----CCCCH
Confidence 34555 78899998777 3446799999998763321 234567889999998753 23578
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCC--CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc----CCCCCCchhHHHHHH
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA----SGSLDNDASSVRLFA 290 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPT--G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~----~~~~~~~~~~~~~~~ 290 (363)
+++++++++ +++++++.+++||+ |.. ...++++|+++|+++|+++|+|.....+. ++ . ...+.+....
T Consensus 207 ~dle~aI~~---~TklV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~g-l-~~~p~~~~~l 280 (464)
T PRK04311 207 RDYEQAINE---NTALLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYG-L-PDEPTVQELL 280 (464)
T ss_pred HHHHHhcCc---cCeEEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhcc-C-CCCCchhhHH
Confidence 999999873 46788889999994 532 22467888888999999999999632221 11 0 0011222222
Q ss_pred hcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHH
Q 017967 291 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 291 ~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~ 330 (363)
+. .-.++++|..|.+| |-..|++ ++. ++.++++.
T Consensus 281 ~~-GaDiv~fSg~K~Lg--Gp~~G~i--~g~-~~li~~l~ 314 (464)
T PRK04311 281 AA-GVDLVTFSGDKLLG--GPQAGII--VGK-KELIARLK 314 (464)
T ss_pred hc-CCcEEEecCccccc--CCceEEE--EEc-HHHHHHHh
Confidence 23 34488999999887 3358888 554 66554443
No 253
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.37 E-value=1.5e-11 Score=113.73 Aligned_cols=208 Identities=20% Similarity=0.120 Sum_probs=139.1
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEE
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv 182 (363)
.+.+.+++.... .+. ..|+......+|.+.+++++.. +..++ +.+||.|..++. ...+.|++.|++
T Consensus 8 ~~~m~~a~~~a~-~gd-~~Yg~D~~~~~l~~~i~~l~g~--------e~a~f--~~sGT~An~~al--~~~~~~~~~vi~ 73 (290)
T PF01212_consen 8 TPAMLEAMAAAN-VGD-DAYGEDPTTARLEERIAELFGK--------EAALF--VPSGTMANQLAL--RAHLRPGESVIC 73 (290)
T ss_dssp -HHEEHHHHHTT-SB--CCTTSSHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHH--HHHHHTTEEEEE
T ss_pred CHHHHHHHHccc-cCC-cccCCChhHHHHHHHHHHHcCC--------CEEEE--eCCCChHHHHHH--HHHHhcCCceec
Confidence 445566654433 233 3699999999999999999643 34445 789999998884 344579999999
Q ss_pred cCCCCcch---HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEEEcCCCCCC-CCCCCHHHHHHHH
Q 017967 183 SSPTWGNH---KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPT-GIDPTPEQWEKIA 255 (363)
Q Consensus 183 ~~P~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~i~~p~NPT-G~~~s~~~~~~i~ 255 (363)
..+++... .......|++++.++.. +++.++++++++.+.. +...+.++.+.+++|-. |.+++.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 99866422 22335689999999873 2378999999999987 22457788889999975 8899999999999
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHh
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 335 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~ 335 (363)
++|+++|+.++.|.+-..-.-. ....++..+. .+-+ .+..|++|.+|+++ |.+ ++.+++.+++.....+.
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~-~~~D-~v~~~~tK~~g~~~---Gav--l~~~~~~i~~~~~~~k~ 221 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAA---ALGVSLAEIA-AGAD-SVSFGGTKNGGAPG---GAV--LAGNKEFIAKARRQRKR 221 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHH-TTSS-EEEEETTSTT-SSS---EEE--EEESHHHHHHHHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhhh---cccccHHHHh-hhCC-EEEEEEEccccccc---ceE--EEechHHHHHHHHHHHH
Confidence 9999999999999993211110 0112334443 2233 45668899998764 777 55567755555444444
Q ss_pred h
Q 017967 336 L 336 (363)
Q Consensus 336 ~ 336 (363)
+
T Consensus 222 ~ 222 (290)
T PF01212_consen 222 L 222 (290)
T ss_dssp H
T ss_pred h
Confidence 3
No 254
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.36 E-value=4.9e-11 Score=109.98 Aligned_cols=183 Identities=21% Similarity=0.278 Sum_probs=120.0
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEE-EcCCCCcchHHHH---------
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL-ISSPTWGNHKNIF--------- 194 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vl-v~~P~y~~~~~~~--------- 194 (363)
..|-..|.+-.|+.+.. ++-++-.|..+||+|+.++ ++..++|||+.+ +...-|.....++
T Consensus 53 D~GRd~le~iyA~vfga-------E~ALVRpq~vSGTHAi~~~--Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GS 123 (403)
T PF06838_consen 53 DIGRDKLERIYADVFGA-------EDALVRPQFVSGTHAIALA--LFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGS 123 (403)
T ss_dssp -HHHHHHHHHHHHHCT--------SEEEEETTS-SHHHHHHHH--HHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSS
T ss_pred CccHHHHHHHHHHHhCc-------hhhhhcccccchHHHHHHH--HHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCC
Confidence 44666666666666433 3555556689999998888 888899999977 4567788777766
Q ss_pred -hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc--CCeEEEecCC
Q 017967 195 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAY 271 (363)
Q Consensus 195 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~De~y 271 (363)
+..|+++..+++. +++.+|.+.++++++. +.+++++.-+...-+-..++.++++++++++++. ++++++|++|
T Consensus 124 L~e~Gi~Y~~v~L~--~dg~~D~~~i~~~~~~--~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCY 199 (403)
T PF06838_consen 124 LKEFGIKYREVPLT--EDGTIDWEAIKKALKP--NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCY 199 (403)
T ss_dssp TGGGT-EEEE--B---TTSSB-HHHHHHHHHT--TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TT
T ss_pred hHHhCceeEEEeec--CCCCcCHHHHHHhhcc--CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 5678999999984 4689999999999993 4566777666777777789999999999999874 7999999999
Q ss_pred CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc--ceEEEEeeCChhHHHHHHHHHH
Q 017967 272 QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER--IGAMNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R--vG~i~~v~~~~~~~~~~~~~l~ 334 (363)
.+|.... |+ .. - .-.++.+|+-|+.| .|+- -||+ +. .++.+++...+|.
T Consensus 200 GEFvE~~-EP--~~------v-GADl~aGSLIKNpG-GgiAptGGYI--aG-r~~lVe~~a~RLT 250 (403)
T PF06838_consen 200 GEFVETQ-EP--TE------V-GADLMAGSLIKNPG-GGIAPTGGYI--AG-RKDLVERAAYRLT 250 (403)
T ss_dssp TTTTSSS--G--GG------G-T-SEEEEETTSGGG-TTT-SS-EEE--EE-SHHHHHHHHHHHS
T ss_pred ceecccc-Cc--cc------c-chhheeccceeCCC-CCccCcCCEE--ec-hHHHHHHHHhhhc
Confidence 9998752 21 11 1 23478999999998 5653 3677 55 4886666655553
No 255
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.36 E-value=4.6e-11 Score=114.97 Aligned_cols=189 Identities=14% Similarity=0.164 Sum_probs=123.2
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~ 200 (363)
.....+|.+.++++... +..+. +++|+.|+.++ ++.++.+||+|+++.+.|.+.. ..+...|++
T Consensus 63 ~P~~~~lE~~la~leg~--------~~av~--~sSG~aAi~~a--l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~ 130 (384)
T PRK06434 63 NPTVQAFEEKYAVLENA--------EHALS--FSSGMGAITSA--ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIH 130 (384)
T ss_pred ChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcE
Confidence 44567888899988533 34545 89999999988 5566889999999987665554 556688999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
++.++.++.+++.+ . +++++++++..|.|||+.+ .++++|.++|++++ +++|.++......
T Consensus 131 v~fvd~~~~~~~~l---------~--~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~~~--- 191 (384)
T PRK06434 131 VDYIDTDRLNSLDF---------D--PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPYNQ--- 191 (384)
T ss_pred EEEECCCChhheee---------c--CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcccC---
Confidence 99998743222221 1 2346688889999999976 46777788899988 4669996432211
Q ss_pred CchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.++ +. .-.+++.|.+|.++-+| .=.|.+ ++.+++..+++ +..........+++...++..-|+.
T Consensus 192 ---~pl----~~-gaDivv~S~tK~i~G~~d~~gG~v--v~~~~~~~~~~----~~~~~~~G~~~~~~~A~l~~~gL~t 256 (384)
T PRK06434 192 ---NPL----DL-GADVVIHSATKYISGHSDVVMGVA--GTNNKSIFNNL----VERRKTLGSNPDPIQAYLALRGLKT 256 (384)
T ss_pred ---Cch----hc-CCCEEEeecccccCCCCCceEEEE--ecCcHHHHHHH----HHHHHhcCCCCCHHHHHHHHhCCCc
Confidence 122 11 24577888999997544 324555 55556633333 3222233445677766666665543
No 256
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.36 E-value=1e-10 Score=111.38 Aligned_cols=193 Identities=19% Similarity=0.150 Sum_probs=137.6
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~ 200 (363)
......|.++++++- + .++.+. +++|.+|+..+ ++.++.+||+|+++...|.+....+ ++.|++
T Consensus 62 nPT~~~lE~~~a~LE-g-------~~~~~a--fsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~ 129 (396)
T COG0626 62 NPTRDALEEALAELE-G-------GEDAFA--FSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE 129 (396)
T ss_pred CccHHHHHHHHHHhh-C-------CCcEEE--ecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence 556678888998884 2 245555 89999998887 6777889999999999998876655 478888
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
+..++. .+.+.+++++.+ ++++++++=.|.|||-.+ .++.+|+++|+++|+++|+|+.|....+..
T Consensus 130 ~~~~d~-------~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-- 195 (396)
T COG0626 130 VTFVDP-------GDDEALEAAIKE--PNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQR-- 195 (396)
T ss_pred EEEECC-------CChHHHHHHhcc--cCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccC--
Confidence 887753 245566666652 357788889999999765 467778888999999999999998765532
Q ss_pred CchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhc-cccCCCchHHHHHHhcccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLAR-PMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~-~~~~~~s~~~q~~~~~~l~ 357 (363)
+ ++. .-.|+++|.+|.++--+==+|-+ +++++++ +.+.+....+ ......+++...++.+.|+
T Consensus 196 ----P----L~~-GaDIVvhSaTKyl~GHsDvl~G~-v~~~~~~----~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk 259 (396)
T COG0626 196 ----P----LEL-GADIVVHSATKYLGGHSDVLGGV-VLTPNEE----LYELLFFAQRANTGAVLSPFDAWLLLRGLR 259 (396)
T ss_pred ----h----hhc-CCCEEEEeccccccCCcceeeeE-EecChHH----HHHHHHHHHHhhcCCCCCHHHHHHHHhccc
Confidence 1 122 24588999999997433333433 2556666 4444333333 3566788888888877665
No 257
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.35 E-value=5.8e-11 Score=114.32 Aligned_cols=199 Identities=18% Similarity=0.106 Sum_probs=136.9
Q ss_pred CCCCCccccHHHHHHHHHHHccCCC------CCCCC--CcchHHHHHHHHHHHhcCCCCcccC-CcEEEEeccchhHHHH
Q 017967 95 TEELQPYVLDVVKKAENLMLERGEN------KEYLP--IEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGSLR 165 (363)
Q Consensus 95 ~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt~al~ 165 (363)
|..+..+.++.+.+++.+....... ..+.. ..-..++|+.+++++... + ++|++ +.|+|.+++
T Consensus 4 d~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~------~~~~v~~--~~~~t~a~~ 75 (371)
T PF00266_consen 4 DNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAP------PDEEVVF--TSNGTEALN 75 (371)
T ss_dssp BTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSS------TTEEEEE--ESSHHHHHH
T ss_pred eCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCc------ccccccc--ccccchhhh
Confidence 4455667788888888776532110 11111 123457888899997543 3 68877 999999999
Q ss_pred HHHHHHHH-hCCCCEEEEcCCCCcchH----HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 166 LAAALIER-YFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 166 l~~~l~~~-~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
++...+.. +.+||+|++.+-.|+... .+.+..|+++..++.+ .+..+|++.+++.+. +++.+++++..+|
T Consensus 76 ~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~--~~~~~~~~~~~~~l~---~~~~lv~~~~~~~ 150 (371)
T PF00266_consen 76 AVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD--PGGSLDLEDLEEALN---PDTRLVSISHVEN 150 (371)
T ss_dssp HHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG--TTSSCSHHHHHHHHH---TTESEEEEESBET
T ss_pred hhhhccccccccccccccccccccccccccccccccchhhhcccccc--ccchhhhhhhhhhhc---cccceEEeecccc
Confidence 98443321 679999999999987766 3344789999999884 356889999999997 3577888889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
-||..++.+ +|.++|+++++++++|.+.+ +...+. . ++...-.+++.|.-|.+|.+| +|++ +.
T Consensus 151 ~tG~~~pi~---~I~~~~~~~~~~~~vD~~~~-~g~~~i-----d----~~~~~~D~~~~s~~Kl~gp~G--~g~l--~v 213 (371)
T PF00266_consen 151 STGVRNPIE---EIAKLAHEYGALLVVDAAQS-AGCVPI-----D----LDELGADFLVFSSHKLGGPPG--LGFL--YV 213 (371)
T ss_dssp TTTBBSSHH---HHHHHHHHTTSEEEEE-TTT-TTTSS-----------TTTTTESEEEEESTSTTSSST--EEEE--EE
T ss_pred cccEEeeec---eehhhhhccCCceeEechhc-cccccc-----c----ccccccceeeecccccCCCCc--hhhh--ee
Confidence 999998755 56677999999999999954 332211 1 122234578889999555555 6888 55
Q ss_pred CChh
Q 017967 321 SSSD 324 (363)
Q Consensus 321 ~~~~ 324 (363)
. ++
T Consensus 214 ~-~~ 216 (371)
T PF00266_consen 214 R-PE 216 (371)
T ss_dssp E-HH
T ss_pred h-hh
Confidence 4 55
No 258
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=5.1e-11 Score=116.54 Aligned_cols=252 Identities=10% Similarity=0.052 Sum_probs=143.5
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+++ .++|+..|.-...-|+ -.+.+.+++.+.++... ...+.+.....+|-+.+++..-.. ..+++.+
T Consensus 36 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f- 106 (425)
T PRK07495 36 DKEGR-RYIDFAAGIAVVNTGH--RHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGD-----FAKKTIF- 106 (425)
T ss_pred eCCCC-EEEEccccHHhhccCC--CCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCC-----CCCEEEE-
Confidence 34444 7888876642211222 23455555555443211 011222233334444444442110 0257877
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCC-------------CCeEEEecccCCCCCCC----HH
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR-------------VPWSEYRYYDPKTVGLD----FE 217 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G-------------~~~~~v~~~~~~~~~~d----~~ 217 (363)
+++|++|.+.+..+........+|+...-+|.+...... ..| ..+..+|..+. ..+.+ ++
T Consensus 107 -~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 184 (425)
T PRK07495 107 -VTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLA 184 (425)
T ss_pred -CCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHH
Confidence 999999999997665555434678888888866532211 111 02233443211 12233 44
Q ss_pred HHHHHHHc--CC-CCcEEEEEcCCCCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC
Q 017967 218 GMIADIKA--AP-GGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (363)
Q Consensus 218 ~l~~~l~~--~~-~~~~~~~i~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (363)
.+++.+.. .+ +...+++-+..+| +| ..++.+.+++|.++|+++|+++|+||+|.+|...+. .+.. +..
T Consensus 185 ~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~---~~a~----~~~ 256 (425)
T PRK07495 185 ALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK---LFAM----EHH 256 (425)
T ss_pred HHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC---ceee----ccc
Confidence 55666642 12 2334555455666 78 457999999999999999999999999998854431 1111 112
Q ss_pred CeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+.+.-+.+|||.++ .|+++|++ +++ ++ +.+.+........++.+++++.++...|
T Consensus 257 gv~pDi~tlsK~l~-~G~pigav--~~~-~~----i~~~~~~~~~~~T~~~~pl~~aaa~a~l 311 (425)
T PRK07495 257 EVAADLTTMAKGLA-GGFPLAAV--TGR-AE----IMDAPGPGGLGGTYGGNPLGIAAAHAVL 311 (425)
T ss_pred CCCCCEEeehhhhc-CCccceEE--EEc-HH----HHhccCCCCcCCCCCCCHHHHHHHHHHH
Confidence 23445789999998 89999999 665 55 4444443333445577888888554443
No 259
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.33 E-value=1.9e-10 Score=112.70 Aligned_cols=215 Identities=16% Similarity=0.102 Sum_probs=135.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC---Ccc--hHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEG--LAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~G--~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
..||.+--.+.++.+..++++.+.+++.+......+.+|.- ..| ...+++.+++++... ..++ ++
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--------~alv--v~ 144 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--------DALV--VN 144 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--------cEEE--EC
Confidence 46665533344555666678888888877664321122311 112 367888999886432 3334 67
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCc---c---hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWG---N---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~---~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
+|+.|+.++ +..+.+||+|+++...+. + +...++..|++++.++.. ...++++++++++ +++++
T Consensus 145 sg~aAi~l~---l~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~----~~~~l~dle~aI~---~~T~l 214 (454)
T TIGR00474 145 NNAAAVLLA---LNTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT----NRTHLKDYEDAIT---ENTAL 214 (454)
T ss_pred CHHHHHHHH---HHHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC----CCCCHHHHHHhcC---cCCEE
Confidence 888888776 345689999999986532 2 234567889999998752 2357899999887 35677
Q ss_pred EEEcCCCCCC--CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC---CCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 233 LLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG---SLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 233 ~~i~~p~NPT--G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
+++.+++||+ |.. ...++++|+++|+++|+++++|....-+... +. ...+.+....+.+ -.++++|.+|.+|
T Consensus 215 v~~~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl-~~~p~~~~~~~~G-aDiv~fSg~K~Lg 291 (454)
T TIGR00474 215 LLKVHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGL-PDEPTVQEVIAAG-VDLVTFSGDKLLG 291 (454)
T ss_pred EEEEccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhccC-CCCcccccHhHcC-CCEEEecCccccC
Confidence 7788999996 531 1235777888899999999999863322110 00 0011111222232 2388899999886
Q ss_pred cccccceEEEEeeCChhHH
Q 017967 308 LYAERIGAMNVVCSSSDLA 326 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~ 326 (363)
-+ ..|++ ++. ++.+
T Consensus 292 Gp--~~G~i--~g~-~~~i 305 (454)
T TIGR00474 292 GP--QAGII--VGK-KELI 305 (454)
T ss_pred CC--eEEEE--EEC-HHHH
Confidence 34 57888 665 5544
No 260
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.28 E-value=5.7e-10 Score=106.43 Aligned_cols=221 Identities=13% Similarity=0.078 Sum_probs=144.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHc--cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE--RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
..++||..+.|.....++.+.+.+.+++.+... .+...-++...-+.+|.+.+|+|+.. +..++ ..+|
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~--------e~al~--f~SG 108 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA--------EAALL--FSSG 108 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--------CcEEE--Eccc
Confidence 478999999886555444444444444444221 11112344555678899999999633 34444 4666
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-C--CcEEEEEcC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-G--GSFILLHGC 237 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~--~~~~~~i~~ 237 (363)
-.|..-+ +-.++.++|.|+.-.-.+-....-++..+.+++.+. ..|++.||+.+++.+ . +.++++.-.
T Consensus 109 y~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~-------HnD~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 109 FVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFK-------HNDLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred chhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEec-------CCCHHHHHHHHHhhhccCCCceEEEEec
Confidence 6664333 455567899999999888888888888888988885 368899999997622 1 234555444
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHH-HH-HhcCCeEEEEEcCccccccccccceE
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LF-ATRGMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~-~~~~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
--.=.|.+ .++.+|++++++|+.++++||++.--.+++. ...+. .+ +...+..|++++|||.||..| ||
T Consensus 180 VfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~---GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~ 250 (388)
T COG0156 180 VFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPN---GRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GY 250 (388)
T ss_pred cccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCC---CccHHHHhCCCCccceEEEEEchhhhcccC---ce
Confidence 44445655 4567788889999999999999876666531 11222 22 222455899999999999766 77
Q ss_pred EEEeeCChhHHHHHHHHHH
Q 017967 316 MNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 316 i~~v~~~~~~~~~~~~~l~ 334 (363)
+ +.+...++.++...+
T Consensus 251 v---~g~~~~~d~L~~~ar 266 (388)
T COG0156 251 I---AGSAALIDYLRNRAR 266 (388)
T ss_pred e---eCcHHHHHHHHHhCC
Confidence 7 555775555544433
No 261
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=5.9e-10 Score=109.57 Aligned_cols=249 Identities=12% Similarity=0.055 Sum_probs=139.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCC--CCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+||+..|.-...-|+ -.+.|.+++.+.++..... .........+|.+.++++... ..+.+.+ +++|+
T Consensus 44 ~ylD~~~g~~~~~lGh--~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~------~~~~v~f--~~SGs 113 (433)
T PRK08117 44 EYLDFTSGIAVANVGH--RHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPG------GLDCFFF--SNSGA 113 (433)
T ss_pred EEEECCcchhhccCCC--CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCC------CCCEEEE--eCcHH
Confidence 7888877642122222 2445666665554321101 111223344555666555311 1357766 89999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCC--------C-----CeEEEecccCCC--CC--------CCHH
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR--------V-----PWSEYRYYDPKT--VG--------LDFE 217 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G--------~-----~~~~v~~~~~~~--~~--------~d~~ 217 (363)
+|.+.+..+...+....+|+...-+|.+...... ..+ . .+..+|..+... .+ -+++
T Consensus 114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (433)
T PRK08117 114 EAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLR 193 (433)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHH
Confidence 9999986654444333678888777766432211 111 0 122333211000 00 1456
Q ss_pred HHHHHHHc--CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 218 GMIADIKA--APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 218 ~l~~~l~~--~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
.+++.+.. .++....+++-.-..-.|.. .+.+.+++|.++|++||+++|+||+|.+|...+. ......+ +-.+
T Consensus 194 ~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~---~~~~~~~-gv~p 269 (433)
T PRK08117 194 DLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE---WFAAQTF-GVVP 269 (433)
T ss_pred HHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc---chhHhhc-CCCC
Confidence 67776653 22334444443334444654 5789999999999999999999999998855431 1111111 1112
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ +.+|||.+| +|+++|++ ++. ++ +.+.+........++.+++++.++...|+
T Consensus 270 D---i~t~sK~lg-~G~pigav--~~~-~~----i~~~~~~~~~~~T~~~np~~~aaa~a~L~ 321 (433)
T PRK08117 270 D---IMTIAKGIA-SGLPLSAV--VAS-KE----LMEQWPLGSHGTTFGGNPVACAAALATLE 321 (433)
T ss_pred C---Eeehhhhcc-CCCcceeE--EEc-HH----HHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 2 469999999 89999999 654 66 44444333333344667888887766655
No 262
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.28 E-value=1.4e-11 Score=102.92 Aligned_cols=118 Identities=14% Similarity=0.216 Sum_probs=81.2
Q ss_pred CCCCCCCchhhHHHHHhc-----CCCC-CcEEeeccccCCCCCCccccHHHHHHHHHH-----------Hc-cCCCCCCC
Q 017967 62 VTMAPPDPILGVSEAFKA-----DTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLM-----------LE-RGENKEYL 123 (363)
Q Consensus 62 v~~~~~~~~~~~~~~~~~-----~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~-----------~~-~~~~~~Y~ 123 (363)
....+.++.+..-+.|+. ..+| ++|+|+++++. ...+.+...+.+. .+ ......|.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~------l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~a~Y~ 89 (153)
T PLN02994 16 DKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQ------LCSDLIEEWIEENPHADICTAEGTIDSFKDIALFQ 89 (153)
T ss_pred ccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhH------hHHHHHHHHHhCCCccccCCcHHHHHHHHHHhcCC
Confidence 333445555554455544 3566 79999998861 1222222222110 00 00013488
Q ss_pred CCcchHHHHHHHHHHHhcCCC--CcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcc
Q 017967 124 PIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN 189 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~--~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~ 189 (363)
+..|.++||+++|+|+.+.++ ..+++++|++ |.|++++++++ +..++.|||.|+|++|+|+.
T Consensus 90 ~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l--~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 90 DYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEII--MFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHH--HHHHcCCCCEEEEeCCCCCC
Confidence 899999999999999988877 5688999988 99999999998 56668899999999999973
No 263
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.28 E-value=3.5e-10 Score=110.25 Aligned_cols=144 Identities=17% Similarity=0.102 Sum_probs=101.2
Q ss_pred cCCcEEEEeccchhHHHHHHHHHHHHhCCC---CEEEEcCCCCcchHH----HHhhCCCCe----EEEecccCCCCCCCH
Q 017967 148 KEQRVATVQGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNHKN----IFNDARVPW----SEYRYYDPKTVGLDF 216 (363)
Q Consensus 148 ~~~~i~~~~t~ggt~al~l~~~l~~~~~~g---d~Vlv~~P~y~~~~~----~~~~~G~~~----~~v~~~~~~~~~~d~ 216 (363)
++++|++ |.|+|++++++.. .++.+| +.|++....|+.... .++..|+++ +.++. .+++.+++
T Consensus 85 ~~~~v~~--~~~~t~~l~~~~~--~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~ 158 (406)
T TIGR01814 85 KEDEVVV--MNTLTINLHLLLA--SFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRL 158 (406)
T ss_pred CCCcEEE--eCCchHHHHHHHH--HhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCH
Confidence 4789988 9999999998833 334454 368888888876333 345778887 45554 33567799
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v 296 (363)
+.+++.++...++++++++++++|.||..++ +++|.++|+++|+++++|++ +.+..-+. .+ ....-.
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~a-q~~G~~~i-----d~----~~~gvD 225 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLA-HAVGNVPL-----DL----HDWGVD 225 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcc-cccCCccc-----cc----ccCCCC
Confidence 9999888643346788889999999999987 55566779999999999999 44332111 11 122345
Q ss_pred EEEEcCccccc-ccc
Q 017967 297 LVAQSYSKNLG-LYA 310 (363)
Q Consensus 297 i~~~S~SK~~~-l~G 310 (363)
+++.|..|.++ -+|
T Consensus 226 ~~~~s~hK~l~g~pG 240 (406)
T TIGR01814 226 FACWCTYKYLNAGPG 240 (406)
T ss_pred EEEEcCccccCCCCC
Confidence 78899999874 345
No 264
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.27 E-value=5.6e-10 Score=107.97 Aligned_cols=189 Identities=13% Similarity=0.069 Sum_probs=125.2
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCC-cchHHHHhhCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDAR 198 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G 198 (363)
..|.......+|.+++++++.. +.++. +.+||.|++++ +...+.|||.| +..+| ......+...|
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~--------e~aV~--v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G 137 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGF--------KHVVP--THQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNG 137 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--eCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence 4698888899999999999633 45666 89999999986 33346799965 44434 33344367788
Q ss_pred CCeEEEecc--------cCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCCCCC-CCCCCHHHHHHHHHHHHhcCCeEEEe
Q 017967 199 VPWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFD 268 (363)
Q Consensus 199 ~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~D 268 (363)
...+.+..+ ++.++.+|++.+++.+++.. .++.++.+.+++|-. |...+.+++++|.++|+++|+.+|+|
T Consensus 138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 865555311 24568899999999998532 233344455677888 78999999999999999999999999
Q ss_pred cCCC-C---CcCC-CCCCchhHH----HHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHH
Q 017967 269 VAYQ-G---FASG-SLDNDASSV----RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (363)
Q Consensus 269 e~y~-~---~~~~-~~~~~~~~~----~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~ 328 (363)
.+-. + |... .......++ +.+.. --..+..|++|.++.+ . -|++ ++.|++.+++
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~s--~aD~~t~S~~K~~~~~-~-GG~i--~t~D~eL~~~ 280 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMFS--YADGCTMSGKKDCLVN-I-GGFL--AMNDEELFDE 280 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhccC--cCcEEEEeCCCCCCCC-C-ceEE--EECCHHHHHH
Confidence 9842 2 1100 000001122 12211 2345567799999754 2 3777 7777774333
No 265
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.26 E-value=3.3e-10 Score=104.41 Aligned_cols=186 Identities=19% Similarity=0.126 Sum_probs=135.7
Q ss_pred ccccHHHHHHHHHHHccCCCCCCC--CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g 177 (363)
.+.++....+...+.-+...+-|. .......|.+.+|.+-. .+..+.+.+|+.|+.++ ++.+..+|
T Consensus 34 sy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEG----------G~aa~a~aSG~AA~~~a--i~~la~aG 101 (426)
T COG2873 34 SYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEG----------GVAALAVASGQAAITYA--ILNLAGAG 101 (426)
T ss_pred eeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhc----------chhhhhhccchHHHHHH--HHHhccCC
Confidence 455666666655543222223343 35567889999998832 33334479999998887 78888999
Q ss_pred CEEEEcCCCCcchHH----HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHH
Q 017967 178 AKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (363)
Q Consensus 178 d~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~ 253 (363)
|.|+-.+--|.+... .++++|+++..++- .|++.+++++++ +++++++-.-.||-+.+. ++++
T Consensus 102 D~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~-------~d~~~~~~aI~~---nTkavf~EtigNP~~~v~---Die~ 168 (426)
T COG2873 102 DNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-------DDPENFEAAIDE---NTKAVFAETIGNPGLDVL---DIEA 168 (426)
T ss_pred CeeEeeccccCchHHHHHHHHHhcCcEEEEeCC-------CCHHHHHHHhCc---ccceEEEEeccCCCcccc---CHHH
Confidence 999999887766544 55789999999864 468999999984 577888788999999876 5677
Q ss_pred HHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 254 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
|+++|+++++++|+|+.+..-..- .+ .+. .--|+++|.||..|--|--+|-+++-+.
T Consensus 169 ia~iAh~~gvpliVDNT~atpyl~------rP----~~h-GADIVvHS~TK~igGhGt~iGG~iVD~G 225 (426)
T COG2873 169 IAEIAHRHGVPLIVDNTFATPYLC------RP----IEH-GADIVVHSATKYIGGHGTAIGGVIVDGG 225 (426)
T ss_pred HHHHHHHcCCcEEEecCCCcceec------ch----hhc-CCCEEEEeecccccCCccccceEEEeCC
Confidence 888899999999999997653211 01 122 3457799999999989999998855444
No 266
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.25 E-value=8e-10 Score=104.34 Aligned_cols=193 Identities=17% Similarity=0.142 Sum_probs=140.4
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCCC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 200 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~ 200 (363)
......+.+.+++.... .+.++ +++|..|+..+ ++.++.+|++|+..+..|.+...+++ .+|++
T Consensus 76 nPt~~~le~~iaal~ga--------~~~l~--fsSGmaA~~~a--l~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie 143 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGA--------AHALL--FSSGMAAITVA--LLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGE 143 (409)
T ss_pred CCchHHHHHHHHHHhCC--------ceEEE--ecccHHHHHHH--HHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCce
Confidence 44456777888877433 34655 89999898777 56667899999999999998877765 67888
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 280 (363)
...++++ +++.+++++.+ ++.++++=+|.||+..+. ++++|.++|+++|+++|+|+.+.....-+
T Consensus 144 ~~~vd~~-------~~~~~~~~i~~---~t~~V~~ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~~~-- 208 (409)
T KOG0053|consen 144 GDFVDVD-------DLKKILKAIKE---NTKAVFLESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYNQD-- 208 (409)
T ss_pred eeeechh-------hHHHHHHhhcc---CceEEEEECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCcccccC--
Confidence 8777652 57888888873 577888899999998876 45666667889999999999998875432
Q ss_pred CchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 281 ~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+ +.. .-.|++.|.+|.+|--+==+|-++ +..+++ +.+.+.........+.+++....+.+.|+.
T Consensus 209 ----p----L~l-GADIV~hSaTKyi~Ghsdvi~G~i-v~n~~~----~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt 272 (409)
T KOG0053|consen 209 ----P----LPL-GADIVVHSATKYIGGHSDVIGGSV-VLNSEE----LASRLKFLQEDLGWCEDPFDLFLLSRGLKT 272 (409)
T ss_pred ----h----hhc-CCCEEEEeeeeeecCCcceeeeEE-ecCcHH----HHHHHHHHHHHhcCCCCHHHHHHHhcCcch
Confidence 1 111 245889999999974333344441 333466 666666666677779999988888776653
No 267
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.25 E-value=1.1e-09 Score=107.75 Aligned_cols=255 Identities=13% Similarity=0.038 Sum_probs=141.6
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+.+++ .+||+..|.-...-|+ -.+.+.+++.+.++.. ..+....+..+.+..+|+.+....... ..+++.+ +
T Consensus 52 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~--~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~ 123 (443)
T PRK06058 52 DVDGN-RLIDLGSGIAVTSVGN--SAPRVVEAVREQVARF--THTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSAL--F 123 (443)
T ss_pred eCCCC-EEEEcCcchhhhccCC--CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCC-CCCEEEE--e
Confidence 34443 7888877642122222 2345555555554321 111111122344455555554332110 0146766 8
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC--------C-----CeEEEecccC--C--CCCCC----
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDP--K--TVGLD---- 215 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G--------~-----~~~~v~~~~~--~--~~~~d---- 215 (363)
.+|++|.+.+..+...+...++|+....+|.++...... .+ . .+..+|.... + ....+
T Consensus 124 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (443)
T PRK06058 124 NSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEA 203 (443)
T ss_pred CCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHH
Confidence 899999999977655554447899999999877543321 11 1 1222221000 0 00011
Q ss_pred ----HHHHHHHHHcCCCCcEEEEEcCCCCCCCCC--CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 216 ----FEGMIADIKAAPGGSFILLHGCAHNPTGID--PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 216 ----~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~--~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
++.+++.+. +++. ..++..|-+..|-+ .+.+-+++|.++|++||+++|.||++.+|...+ ..+.. ..
T Consensus 204 ~~~~~~~l~~~~~--~~~i-Aavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG---~~fa~-~~ 276 (443)
T PRK06058 204 AARAITVIEKQVG--ADNL-AAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG---AWFAC-EH 276 (443)
T ss_pred HHHHHHHHHHhhC--CCce-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh---hhhHH-Hh
Confidence 122222221 2333 44446777777533 458889999999999999999999999985432 12222 22
Q ss_pred HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.+-.+++++ ++|.++ .|+++|++ ++. ++ +.+.+........++.+++++.++...|+.
T Consensus 277 ~gv~PDiv~---~gK~l~-~G~Pi~av--~~~-~~----i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~ 334 (443)
T PRK06058 277 EGIVPDLIT---TAKGIA-GGLPLSAV--TGR-AE----IMDAPHPGGLGGTYGGNPVACAAALAAIET 334 (443)
T ss_pred cCCCCCEEE---Eccccc-CCCccEEE--EEc-HH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 222334443 379999 89999999 665 55 445444333344557788888888776654
No 268
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.25 E-value=2.8e-10 Score=104.94 Aligned_cols=207 Identities=17% Similarity=0.092 Sum_probs=135.8
Q ss_pred cccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEE
Q 017967 101 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV 180 (363)
Q Consensus 101 ~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~V 180 (363)
.+.+.+++++.+.... ....|+...-...+.+.+++.+.. ..+++ +.+||++..++ +...+.||+.|
T Consensus 11 g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~g~--------~a~~F--v~sGT~aN~la--l~~~~~~~~~v 77 (342)
T COG2008 11 GPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELFGK--------EAALF--VPSGTQANQLA--LAAHCQPGESV 77 (342)
T ss_pred CCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHhCC--------ceEEE--ecCccHHHHHH--HHHhcCCCCeE
Confidence 3567888888765422 236687777777777777777532 46666 89999999888 55667899999
Q ss_pred EEcCCCCcchHH--HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc----CCCCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 181 LISSPTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA----APGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 181 lv~~P~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
++..-.+....+ ..+.++ .+..++..+..++.+++|+++..+.. +...+.++++ |.+|--|+++|.+++++|
T Consensus 78 i~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e-~~~te~GtVy~l~el~~i 155 (342)
T COG2008 78 ICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE-NTATEGGTVYPLDELEAI 155 (342)
T ss_pred EEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe-eccCCCceecCHHHHHHH
Confidence 988766533222 112221 22334443456789999999998874 2233444443 444466999999999999
Q ss_pred HHHHHhcCCeEEEecCC--CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHH
Q 017967 255 ADVIQEKNHIPFFDVAY--QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ 332 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y--~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~ 332 (363)
.++|+++|+.+..|.+= ......+ ++.... ..+-+++ ..++||..+.+ +|.+ +..|.+.++++...
T Consensus 156 ~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~----~~~~D~v-~~~~tK~g~~~---~gAi--v~gn~~~~~~a~~~ 223 (342)
T COG2008 156 SAVCKEHGLPLHMDGARLANALVALG--VALKTI----KSYVDSV-SFCLTKGGGAP---VGAI--VFGNRDFAKRARRW 223 (342)
T ss_pred HHHHHHhCCceeechHHHHHHHHHcC--CCHHHH----HhhCCEE-EEecccCCcce---eeeE--EEcCHHHHHHHHHH
Confidence 99999999999999982 1112111 112222 2233444 55679999876 5888 78889855555443
Q ss_pred HH
Q 017967 333 LK 334 (363)
Q Consensus 333 l~ 334 (363)
.+
T Consensus 224 rK 225 (342)
T COG2008 224 RK 225 (342)
T ss_pred HH
Confidence 33
No 269
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.23 E-value=6.9e-11 Score=113.44 Aligned_cols=192 Identities=18% Similarity=0.098 Sum_probs=124.0
Q ss_pred Ccc-hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 125 IEG-LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 125 ~~G-~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
+.| +.+..+.+|+.+... +-.++ ++|+|.++..+ ++..+.|||+|+++.-++-.....+...|+++++
T Consensus 64 p~G~I~eAe~~aA~~fGAd-------~t~fl--vnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGAD-------KTFFL--VNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAIPVY 132 (417)
T ss_dssp TBTHHHHHHHHHHHHHTES-------EEEEE--SSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEE
T ss_pred CccHHHHHHHHHHHhcCCC-------eEEEE--ecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEE
Confidence 444 456666777775432 45555 89999998877 6777899999999999999999999999999999
Q ss_pred EecccCCC---CCCCH-----HHHHHHHHcCCCCcE--EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 204 YRYYDPKT---VGLDF-----EGMIADIKAAPGGSF--ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 204 v~~~~~~~---~~~d~-----~~l~~~l~~~~~~~~--~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
++..++.. .++++ +.+++++++.|.... ++++++|+ =-|+++. +++|+++|+++++.|++||+|..
T Consensus 133 i~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~d---i~~I~~~~h~~~~~llvDEAhGa 208 (417)
T PF01276_consen 133 IPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYD---IKEIAEICHKHGIPLLVDEAHGA 208 (417)
T ss_dssp EEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE----HHHHHHHHCCTECEEEEE-TT-T
T ss_pred ecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEEC---HHHHHHHhcccCCEEEEEccccc
Confidence 87642211 34566 999999998775433 24434432 2388864 66677789999999999999865
Q ss_pred C-cCCCCCCchhHHHHH-H--hcCCeEEEEEcCccccccccccceEEEEeeCCh-hHHHHHHHHHHhh
Q 017967 274 F-ASGSLDNDASSVRLF-A--TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRL 336 (363)
Q Consensus 274 ~-~~~~~~~~~~~~~~~-~--~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~-~~~~~~~~~l~~~ 336 (363)
. .|.+... +...+ + .....++++.|..|.+ +++.-+.++-+-.+. -..+++.+.+..+
T Consensus 209 h~~F~~lp~---~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~ 271 (417)
T PF01276_consen 209 HFGFHPLPR---SALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMH 271 (417)
T ss_dssp TGGCSGGGT---TCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHH
T ss_pred cccCCCCcc---chhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHH
Confidence 4 3321110 00000 1 1234789999999988 477777775555543 3456676666654
No 270
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19 E-value=1.8e-09 Score=105.87 Aligned_cols=253 Identities=12% Similarity=0.087 Sum_probs=138.6
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCC---CCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
.+++ .++|+..|.-...-|+. .+.+.+++.+.++..... .| +. +.+..+|+.+...... .-+++.+
T Consensus 39 ~dG~-~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~-~~----~~~~~la~~l~~~~p~--~~~~v~f- 107 (423)
T PRK05964 39 ADGR-ELIDAISSWWVATHGHN--HPYIDQAIREQLDRLDHVIFAGF-TH----EPAERLAQRLVALTPG--GLDHVFF- 107 (423)
T ss_pred CCCC-EEEEcchhHHhccCCCC--CHHHHHHHHHHHhhCCCcccccc-CC----HHHHHHHHHHHHhCCC--CCCEEEE-
Confidence 3443 78888776432222332 356666665555331101 12 22 2333444444332211 1257877
Q ss_pred eccchhHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHHHhh-CC------------CCeEEEecccCCCCCCCH
Q 017967 156 QGLSGTGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~~~~~~~~d~ 216 (363)
+.+|++|.+.+..+.+.+ . +| .+|+...-+|.+....... .+ ..+..++....+....++
T Consensus 108 -~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 186 (423)
T PRK05964 108 -SDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATL 186 (423)
T ss_pred -eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHH
Confidence 999999999987765554 1 33 5788888888665432211 11 012223321111011227
Q ss_pred HHHHHHHHcCCCCcEEEEEcC-CCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 217 EGMIADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~-p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
+.+++.+.+.++....+++-. .+...|... +.+.+++|.++|++||+++|+||++.++...+ ..... ......+
T Consensus 187 ~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~-~~~~v~p 262 (423)
T PRK05964 187 DALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG---TLFAC-EQAGVSP 262 (423)
T ss_pred HHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhHH-HhcCCCC
Confidence 788888865444444444332 367778766 89999999999999999999999998875432 11111 1112223
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhh------hccccCCCchHHHHHHhcccc
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL------ARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~------~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++ -+++|.++..++++|++ ++ +++ +.+.+... .....++.++++..++...|+
T Consensus 263 Di---~~~~K~l~gG~~p~~av--~~-~~~----i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~ 321 (423)
T PRK05964 263 DI---MCLSKGLTGGYLPLAAT--LC-TAE----IFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD 321 (423)
T ss_pred Ce---eeeehhhhcCcccceEE--EE-cHH----HHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 33 36789998433899998 55 466 44444311 011122455666655555444
No 271
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.16 E-value=4.2e-09 Score=99.84 Aligned_cols=198 Identities=16% Similarity=0.079 Sum_probs=128.4
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCC-Cc-chHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLP-IE-GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~~-G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~ 175 (363)
|+..+.+.|++++..-. . .++.+ .. -..+.++.+...+... ...++ ..+.+||.+++.+ +.+++.
T Consensus 12 GP~~v~~~V~~am~~~~---~-~h~s~~F~~~~~~~~~~L~~v~~t~------~~~~~-ll~gsGt~amEAa--v~sl~~ 78 (383)
T COG0075 12 GPVPVPPRVLLAMARPM---V-GHRSPDFVGIMKEVLEKLRKVFGTE------NGDVV-LLSGSGTLAMEAA--VASLVE 78 (383)
T ss_pred CCCCCCHHHHHHhcCCC---C-CCCCHHHHHHHHHHHHHHHHHhcCC------CCcEE-EEcCCcHHHHHHH--HHhccC
Confidence 45667788888764322 1 22322 11 1233333443333222 11332 3478899998888 677788
Q ss_pred CCCEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHH
Q 017967 176 PGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~ 253 (363)
|||+|++..-+..+. .++++++|.+++.+.. +++..+|+++++++|++.++ ..++.+++.-.+||...+ +++
T Consensus 79 pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~~~-~~~V~~vH~ETSTGvlnp---l~~ 152 (383)
T COG0075 79 PGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKDPD-IKAVAVVHNETSTGVLNP---LKE 152 (383)
T ss_pred CCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcCCC-ccEEEEEeccCcccccCc---HHH
Confidence 999999999887554 6688999999999987 56778999999999996544 445666677788998874 566
Q ss_pred HHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEEEeeCChhHHHHH
Q 017967 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 254 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~~v~~~~~~~~~~ 329 (363)
|.++|++||.++|+|.+ ..+.-.+...+. -+.+ +++.+-=|.++. ||+ |.+ ..+ ++..+++
T Consensus 153 I~~~~k~~g~l~iVDaV-sS~Gg~~~~vd~--------wgiD-v~itgSQK~l~~PPGl--a~v--~~S-~~a~e~~ 214 (383)
T COG0075 153 IAKAAKEHGALLIVDAV-SSLGGEPLKVDE--------WGID-VAITGSQKALGAPPGL--AFV--AVS-ERALEAI 214 (383)
T ss_pred HHHHHHHcCCEEEEEec-ccCCCcccchhh--------cCcc-EEEecCchhccCCCcc--cee--EEC-HHHHHHH
Confidence 77779999999999999 444332221111 2234 445555888865 675 666 444 5543333
No 272
>PRK02769 histidine decarboxylase; Provisional
Probab=99.16 E-value=1.9e-09 Score=103.79 Aligned_cols=175 Identities=17% Similarity=0.125 Sum_probs=118.9
Q ss_pred HHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccC
Q 017967 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP 209 (363)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~ 209 (363)
+.++.+|+++... ++++....|.|||++..++........+++.|++++-.+......++..|++.+.++.+
T Consensus 69 ~~~~~~a~l~g~~------~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~-- 140 (380)
T PRK02769 69 DVMNFFAELFKIP------FNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL-- 140 (380)
T ss_pred HHHHHHHHHhCCC------CCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC--
Confidence 4455556554321 23431223899999966552222224578999999999999999999999999889884
Q ss_pred CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC---CeEEEecCCCCCcCCCCCCchhHH
Q 017967 210 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN---HIPFFDVAYQGFASGSLDNDASSV 286 (363)
Q Consensus 210 ~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~---~~ii~De~y~~~~~~~~~~~~~~~ 286 (363)
.++.+|++.|++.+++...++++++.+.++|+||.+.+.++ |.++|+++| +++.+|.++..+...-.+ ....+
T Consensus 141 ~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~---I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~-~~~~~ 216 (380)
T PRK02769 141 PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKE---IQEILKKIGIDDYYIHADAALSGMILPFVN-NPPPF 216 (380)
T ss_pred CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHH---HHHHHHHhCCCceEEEEEecccceeecccC-ccccC
Confidence 36779999999999864345778888999999999977555 566689998 699999999876432110 00011
Q ss_pred HHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 287 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 287 ~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
.+ .. .-..+..|..|.++. -..+|.+ +..+
T Consensus 217 -d~-~~-~vDsis~s~HK~~~~-P~g~G~l--~~r~ 246 (380)
T PRK02769 217 -SF-AD-GIDSIAISGHKFIGS-PMPCGIV--LAKK 246 (380)
T ss_pred -Cc-cC-CCCEEEECCcccCCC-CCCcEEE--EEeh
Confidence 11 11 234557788998763 3447888 6653
No 273
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.14 E-value=1e-08 Score=100.98 Aligned_cols=255 Identities=14% Similarity=0.055 Sum_probs=138.8
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CC-CCCCCcchHHHHHHHHHHHhcCCCCcccCCc-EEEE
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATV 155 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~-i~~~ 155 (363)
.+++ .++|+..|.-...-|+ -.+.+.+++.+.+.... .. .|.+. +.+..+|+.+...........+ +++
T Consensus 36 ~dG~-~ylD~~~g~~~~~lGh--~~p~i~~ai~~q~~~~~~~~~~~~~~----~~~~~lae~L~~~~p~~~~~~~~~f~- 107 (442)
T TIGR00709 36 VEGK-EYLDFLAGAGTLALGH--NHPNMKQKILDYLQSGLPLHTLDLTT----PLKDAFIEALLNIIPKRKMDYKLQFP- 107 (442)
T ss_pred CCCC-EEEEccccHhhhcCCC--CCHHHHHHHHHHHHhccCccccccCc----HHHHHHHHHHHHhCCCcCCCccEEEe-
Confidence 3443 7888877753222222 23455666555443211 11 11222 3333444444332211000123 333
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCC-------C-----CeEEEecccCCC--CC----CCH
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR-------V-----PWSEYRYYDPKT--VG----LDF 216 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G-------~-----~~~~v~~~~~~~--~~----~d~ 216 (363)
+++|++|.+.+..+...+....+|+...-+|.+....+. ..| . .+..++..+... ++ .+.
T Consensus 108 -~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (442)
T TIGR00709 108 -GPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGS 186 (442)
T ss_pred -CCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHH
Confidence 689999999997765555434678888888877654332 111 0 122233211100 00 011
Q ss_pred ----HHHHHHHHc---C-CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH
Q 017967 217 ----EGMIADIKA---A-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (363)
Q Consensus 217 ----~~l~~~l~~---~-~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (363)
+.+++.+.. . .+...+++-+.++|+....++.+-+++|.++|+++|+++|.||++.+|...+ ..+....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~ 263 (442)
T TIGR00709 187 NASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG---TMFAFEH 263 (442)
T ss_pred HHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHH
Confidence 223333321 1 1334455555566665566899999999999999999999999999996543 2333333
Q ss_pred HHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 289 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 289 ~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+ .-.+++++ |+|.++ .|+++|++ ++. ++ ++.+ ........++.+++++.++...|+.
T Consensus 264 ~-gv~PDiv~---~gK~l~-~G~Pigav--~~~-~~-~~~~----~~~~~~~T~~gnpla~aaa~a~L~~ 320 (442)
T TIGR00709 264 A-GIEPDFVV---MSKAVG-GGLPLAVL--LIA-PE-FDAW----QPAGHTGTFRGNQLAMVTGTEALNY 320 (442)
T ss_pred c-CCCCcEEE---Eccccc-CCcccEEE--EEc-hH-Hhcc----CCCcCCCCCCcCHHHHHHHHHHHHH
Confidence 2 33344444 799999 59999999 665 44 2222 1111234456788888887776653
No 274
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.12 E-value=9.2e-09 Score=100.53 Aligned_cols=218 Identities=13% Similarity=0.090 Sum_probs=124.7
Q ss_pred chhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHH-cc-CCCCCC----CCCcchHHHHH----HHHHH
Q 017967 69 PILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ER-GENKEY----LPIEGLAAFNK----VTAEL 138 (363)
Q Consensus 69 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~-~~~~~Y----~~~~G~~~lr~----aia~~ 138 (363)
.++++.+.-...+ .+.++|-..++ ++.|.+++++.... .. +....+ .......+|.+ .++++
T Consensus 15 ~~~~~~~~~~~~~-~~~~~l~~sen-------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l 86 (416)
T PRK13034 15 EVFAAINKELERQ-QDHLELIASEN-------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQL 86 (416)
T ss_pred HHHHHHHHHHHHH-hcCeeeccccc-------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHH
Confidence 4566654333222 26777775543 34677887776653 21 110111 11234566776 88887
Q ss_pred HhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcch-HHHHhh--CCCCe--EEEecccCCCCC
Q 017967 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFND--ARVPW--SEYRYYDPKTVG 213 (363)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~-~~~~~~--~G~~~--~~v~~~~~~~~~ 213 (363)
+.. +...+ .+++|+.|+..+ +..++.|||+|++...+|... ..-++. .+... ..++.+ ..++.
T Consensus 87 ~g~--------~~alv-~~~SG~~A~~~~--l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 154 (416)
T PRK13034 87 FGC--------DYANV-QPHSGSQANGAV--YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVD-RLTGL 154 (416)
T ss_pred hCC--------CceEE-ecCCcHHHHHHH--HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccc-cccCC
Confidence 533 23322 257999998877 566688999999999988762 111111 11111 233332 23567
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC
Q 017967 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (363)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (363)
+|++.+++.+... +++++++..+.+ |... ++.+|.++|+++|+++|+|++..--..... . .. ....
T Consensus 155 ~d~~~le~~l~~~--~~klVi~~~~~~--g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~g-~---~~---~~~~ 220 (416)
T PRK13034 155 IDYDEVEELAKEH--KPKLIIAGFSAY--PREL---DFARFREIADEVGALLMVDMAHIAGLVAAG-E---HP---NPFP 220 (416)
T ss_pred cCHHHHHHHHhhc--CCeEEEECCCcc--cccc---CHHHHHHHHHHcCCEEEEeCcccccCcccC-C---CC---CCCC
Confidence 8999999988642 355666555443 4433 566777779999999999998432222110 0 00 0111
Q ss_pred CeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
.-.+++.|++|.++.+. -|++ ++.++.
T Consensus 221 ~~Di~~~s~~K~l~g~~--GG~v--~~~~~~ 247 (416)
T PRK13034 221 HAHVVTTTTHKTLRGPR--GGMI--LTNDEE 247 (416)
T ss_pred CceEEEEeCcccCCCCC--CeEE--EECcHH
Confidence 24588999999994232 3666 555554
No 275
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.11 E-value=6.5e-09 Score=101.56 Aligned_cols=203 Identities=12% Similarity=0.052 Sum_probs=128.0
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh------C
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------F 175 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~------~ 175 (363)
+.+.+.+.+...+.... .++.......++.+.+.+++.+..+.+-..+++....|.|||+|..++....... .
T Consensus 53 ~~p~~~~~~~~~l~~~~-~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~ 131 (431)
T TIGR01788 53 MEPEARKLMDETINKNM-IDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA 131 (431)
T ss_pred CCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence 45556666666553221 1222222233454444455444333321113565545899999998873222100 1
Q ss_pred CC-----CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHH
Q 017967 176 PG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 250 (363)
Q Consensus 176 ~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~ 250 (363)
.| ..|++++-.+..+...++..|++++.+|+++ +++.+|++.|++++.+ ++.++++...+|.||.+.+.++
T Consensus 132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~---~t~lV~~t~g~t~tG~idpi~~ 207 (431)
T TIGR01788 132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDE---NTIGVVCILGTTYTGEYEDVKA 207 (431)
T ss_pred cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhh---CCeEEEEEeCCCCCcccCCHHH
Confidence 12 3688888899999999999999999999853 3457899999999984 4678888889999999987655
Q ss_pred HHHHHHHHHhc------CCeEEEecCCCCCc----CCCCCCchhHHHHHHhcCCeEEEEEcCcccc-ccccccceEEEEe
Q 017967 251 WEKIADVIQEK------NHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVV 319 (363)
Q Consensus 251 ~~~i~~~~~~~------~~~ii~De~y~~~~----~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v 319 (363)
|.++|+++ ++++.+|.+|.++. .+.. ... + ....-..+..|..|.+ +..| +|.+ +
T Consensus 208 ---I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~---~~~---~-~~~~~DSis~s~HK~~~~P~g--~G~l--~ 273 (431)
T TIGR01788 208 ---LNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDL---EWD---F-RLPRVKSINVSGHKYGLVYPG--VGWV--I 273 (431)
T ss_pred ---HHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCc---hhh---c-CCCCceEEEECchhccCCCCC--cEEE--E
Confidence 55568888 89999999998643 2210 111 1 1111233577889976 5444 6888 5
Q ss_pred eCCh
Q 017967 320 CSSS 323 (363)
Q Consensus 320 ~~~~ 323 (363)
..++
T Consensus 274 ~r~~ 277 (431)
T TIGR01788 274 WRDE 277 (431)
T ss_pred EeCh
Confidence 5544
No 276
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.09 E-value=3e-09 Score=95.21 Aligned_cols=202 Identities=17% Similarity=0.155 Sum_probs=136.2
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC-C
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-P 176 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~-~ 176 (363)
+-+.+-+.+++++....... .-|+......+|.+.+|+.+.+ +..+++ .+||.+..++ ++..+. +
T Consensus 30 TvT~PTdeMr~am~eA~vgD--dVyGeD~tt~rLE~~vA~l~GK-------EAgLFv---~SGTmgNlla--Im~Hc~~r 95 (384)
T KOG1368|consen 30 TVTVPTDEMRRAMAEASVGD--DVYGEDPTTNRLEQRVAELFGK-------EAGLFV---PSGTMGNLLA--IMVHCHQR 95 (384)
T ss_pred cccCChHHHHHHHhhcccCc--ccccCCccHHHHHHHHHHHhCc-------cceeee---cccccccHHH--HHHHhcCC
Confidence 33556788998887765443 3466666778999999999644 244444 5566665555 455565 9
Q ss_pred CCEEEEcCCCC-cchHH--HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC-----CCCcEEEEEcCCCCCCC-CCCC
Q 017967 177 GAKVLISSPTW-GNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----PGGSFILLHGCAHNPTG-IDPT 247 (363)
Q Consensus 177 gd~Vlv~~P~y-~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~~~~~~i~~p~NPTG-~~~s 247 (363)
|..|++-+-.+ ..|++ +....|+.+..+.- ++++.+++++++.++... -+.++++.+-|-||-+| .+++
T Consensus 96 g~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlP 173 (384)
T KOG1368|consen 96 GSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLP 173 (384)
T ss_pred CceEEeccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEee
Confidence 99999887654 22222 33456677776654 667889999999999842 23578888889888777 9999
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhH
Q 017967 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~ 325 (363)
.+++.++.++|+++++-+-.|.+- -|.-. -....++..+....+.|=+ =|||.+|.| ||-+ +..+.+.
T Consensus 174 le~~~~v~~lak~~glkLH~DGAR-i~NAa--vasgV~vk~i~~~fDSVsi--CLSKglgAP---VGSV--iVG~k~F 241 (384)
T KOG1368|consen 174 LEELDRVKALAKRHGLKLHMDGAR-IFNAA--VASGVPVKKICSAFDSVSI--CLSKGLGAP---VGSV--IVGSKDF 241 (384)
T ss_pred HHHHHHHHHHHhccCCeeecchhh-hhhHH--HHcCCCHHHHHHhhhhhhh--hhhccCCCC---cccE--EEccHHH
Confidence 999999999999999999999982 22100 0011233333332233222 268999877 8998 6777773
No 277
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=3.5e-08 Score=97.21 Aligned_cols=249 Identities=16% Similarity=0.157 Sum_probs=134.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCC--CCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|+ -.+.+.+++.+.++..... .+.......+|-+.+++..-.. ..++|.+ +++|+
T Consensus 43 ~ylD~~~g~~~~~lGH--~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-----~~~~v~f--~~SGs 113 (445)
T PRK08593 43 TYIDLLASASSQNVGH--APPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGD-----FEKRVTF--GLSGS 113 (445)
T ss_pred EEEECCccHHhhcCCC--CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC-----CCCEEEE--CCchH
Confidence 6788865532112222 2345555555544321101 1112223344555555442110 0147877 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhCC-------------CCeEEEecccCCC--CC-CC-------HH
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDAR-------------VPWSEYRYYDPKT--VG-LD-------FE 217 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G-------------~~~~~v~~~~~~~--~~-~d-------~~ 217 (363)
+|.+.+..+.+.+....+|+...-+|.+... .+...+ -.+..+|..+... +. .+ ++
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA 193 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence 9999996655444333568888877766532 221111 0123333211100 00 11 23
Q ss_pred HHHHHHHcC--CCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 218 GMIADIKAA--PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 218 ~l~~~l~~~--~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
.+++.+... ++....+++-..+...|.. .+.+-+++|.++|+++|+++|.||++.+|...+ .......+ .-.+
T Consensus 194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG---~~~a~~~~-gv~p 269 (445)
T PRK08593 194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG---KWSSISHF-NITP 269 (445)
T ss_pred HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hHHHHHhc-CCCC
Confidence 444444321 2345566666667777876 788999999999999999999999998885432 12222222 2223
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+ +-+|+|.++ .|+++|++ ++. ++ +.+.+.........+.++++..++...|
T Consensus 270 D---i~t~gK~l~-~G~p~gav--~~~-~~----i~~~~~~~~~~~T~~~~pl~~aaa~a~l 320 (445)
T PRK08593 270 D---LMSFGKSLA-GGMPMSAI--VGR-KE----IMESLEAPAHLFTTGANPVSCAAALATI 320 (445)
T ss_pred C---Eeeeccccc-CCcccEEE--EEc-HH----HHhhhccCCCCCCCCCCHHHHHHHHHHH
Confidence 3 337899998 79999999 665 66 4444432212223345566666554444
No 278
>PLN03032 serine decarboxylase; Provisional
Probab=99.07 E-value=5.5e-09 Score=100.06 Aligned_cols=174 Identities=15% Similarity=0.065 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcE--EEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i--~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
.+.++.+++++. . +++++ ++ |.|||+|..++....+...++..|+++.-.+......++..|++++.+|+
T Consensus 69 ~~v~~~ia~llg----~--~~~~~~G~f--TsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~ 140 (374)
T PLN03032 69 VGVLDWFARLWE----L--EKDEYWGYI--TTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT 140 (374)
T ss_pred HHHHHHHHHHhC----C--CCccCCEEE--eCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee
Confidence 344455555542 2 24555 55 89999998776333222235668898888898899999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC-----CeEEEecCCCCCcCCCCCC
Q 017967 207 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-----HIPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 207 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~-----~~ii~De~y~~~~~~~~~~ 281 (363)
+ .++.+|++.|++.+++....+.+++++..+|+||.+-+.+ +|.++|+++| +++.+|.+|..+...-. .
T Consensus 141 d--~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~---eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~-~ 214 (374)
T PLN03032 141 L--PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLD---RILRILKELGYTEDRFYIHCDGALFGLMMPFV-S 214 (374)
T ss_pred C--CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHH---HHHHHHHHhCCCCCCeeEEEEccchhhhhhcc-C
Confidence 4 4678999999999986433567777788999999996655 5666688886 58999999876532100 0
Q ss_pred chhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 282 ~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
..+.+ .+. . .-..+..|..|.++. -.-+|.+ +..+
T Consensus 215 ~~~~~-~~~-~-~vDSis~s~HK~~g~-P~g~G~l--l~r~ 249 (374)
T PLN03032 215 RAPEV-TFR-K-PIGSVSVSGHKFLGC-PMPCGVA--LTRK 249 (374)
T ss_pred CCccc-CCC-c-CCcEEEECcccccCC-CcCeEEE--EEEc
Confidence 00000 111 1 123356788998873 3346888 5554
No 279
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.07 E-value=2.3e-08 Score=97.67 Aligned_cols=222 Identities=12% Similarity=0.006 Sum_probs=124.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCC-CC-cccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD-NS-VLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~-~~-~~~~~~i~~~~t~ggt 161 (363)
.+||+..|.-...-|+ -.+.+.+++.+.+.... ..+ ......+.+..+|+.+.... .+ .. .+++.+ .+++|+
T Consensus 36 ~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~~~-~~~-~~~~~~~~~~~lae~l~~~~~~~~~~-~~~~~f-~~~sGs 109 (412)
T TIGR02407 36 EYIDFFAGAGALNYGH--NNPKLKQALIDYLADDG-IIH-SLDMATEAKREFLETFNEIILKPRGL-DYKVQF-PGPTGT 109 (412)
T ss_pred EEEEcccchhhccCCC--CCHHHHHHHHHHHhhcc-cee-ccccCcHHHHHHHHHHHHhccCccCC-CceEEE-eCCCch
Confidence 7888876642221222 24566666655543210 101 11111233344444443321 00 01 123433 148999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hC---------CC---CeEEEecccCCCC-CCCHHHHHHHHHcCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA---------RV---PWSEYRYYDPKTV-GLDFEGMIADIKAAP 227 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~---------G~---~~~~v~~~~~~~~-~~d~~~l~~~l~~~~ 227 (363)
+|.+.+..+...+....+|+...-+|.+....+. .. |. .+..+|..+.... .-+++.+++.+.+..
T Consensus 110 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~ 189 (412)
T TIGR02407 110 NAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSS 189 (412)
T ss_pred HHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhcc
Confidence 9999997665544334678888888866643221 11 11 2233333110000 023667887776422
Q ss_pred ---CCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 228 ---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 228 ---~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
+....+++-.-+++.|. ..+.+-+++|.++|+++|+++|+||++.+|.-.+ ....... ..-.++++ +||
T Consensus 190 ~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~~~-~~v~PDi~---~~~ 262 (412)
T TIGR02407 190 SGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG---TFFSFEP-AGIEPDIV---CLS 262 (412)
T ss_pred CCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhHHhcc-cCCCCCEE---Eec
Confidence 23456666666888998 6789999999999999999999999998874322 1111111 12223333 578
Q ss_pred cccccc-cccceEEEEeeC
Q 017967 304 KNLGLY-AERIGAMNVVCS 321 (363)
Q Consensus 304 K~~~l~-G~RvG~i~~v~~ 321 (363)
|.++ + |+|+|++ +++
T Consensus 263 K~lg-~~G~pigav--~~~ 278 (412)
T TIGR02407 263 KSIS-GYGLPLALT--LIK 278 (412)
T ss_pred hhcc-CCccceeEE--EEc
Confidence 9998 6 9999999 665
No 280
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.05 E-value=1.2e-09 Score=100.18 Aligned_cols=193 Identities=12% Similarity=0.079 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--CCC--CEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG--AKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~~g--d~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
.++|.+.|.++-....+...+...|++ ..|+|+.++.+...+.-. ..+ -.|+...|.|+.|......+.-....
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~--GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~ 122 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVF--GTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYK 122 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEE--ECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEE--cCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcc
Confidence 478888887775444444444556655 888888877662222222 111 37999999999999776543322222
Q ss_pred EecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
..-+ ...+ . ........+=++++||||.|..- +.+ ++..+..+|.|-+|..-.|..
T Consensus 123 w~Gd-a~~~-------~---~~~~~~~~IElVTSPNNPDG~lr-----~~V---~~g~~~k~I~D~AYYWPhyTp----- 178 (363)
T PF04864_consen 123 WAGD-ASNF-------K---NSDNPSPYIELVTSPNNPDGQLR-----EAV---LNGSSGKVIHDLAYYWPHYTP----- 178 (363)
T ss_dssp EEEE-CCCG-------T---T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STTTS------
T ss_pred cccc-HHhh-------c---cCCCCCCeEEEEeCCCCCccccc-----chh---cCCCCcceeeeeeeecccccc-----
Confidence 2211 1112 1 11113577888899999999652 222 345567789999998877652
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+. ...+..|-++++||.-|-+|.|+||. +..|+++ .+.+......+..++|.=+|.=++++|+
T Consensus 179 --I~---~~aD~DiMLFT~SK~TGHAGSR~GWA--lVKD~~V----a~kM~~y~~lnTiGvS~dsQLRa~kiLk 241 (363)
T PF04864_consen 179 --IT---APADHDIMLFTLSKLTGHAGSRFGWA--LVKDEEV----AKKMTKYMELNTIGVSRDSQLRALKILK 241 (363)
T ss_dssp -------S-B--SEEEEEHHHHCS-GGG-EEEE--EES-HHH----HHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred --cC---CCCCCceEEEEEecccCcccccccee--eecCHHH----HHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 11 23366788999999999999999999 8999994 4444445556677999999998887765
No 281
>PRK06541 hypothetical protein; Provisional
Probab=99.04 E-value=4.1e-08 Score=97.03 Aligned_cols=223 Identities=14% Similarity=0.101 Sum_probs=123.7
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC-C--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
.+++ .+||+..|.-...-|+ -.+.+.+++.+.+... . ...| ......+|-+.+++.. .. .-+++.+
T Consensus 49 ~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Av~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~----p~--~~~~v~f- 117 (460)
T PRK06541 49 DRGK-RYLDGLAGLFVVQVGH--GRAELAEAAAKQAGTLAFFPLWSY-AHPPAIELAERLAALA----PG--DLNRVFF- 117 (460)
T ss_pred CCCC-EEEECCccHHhccCCC--CCHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhC----CC--CcCEEEE-
Confidence 3443 7888877642112222 2355565655554321 1 0112 1222233444444432 11 1257877
Q ss_pred eccchhHHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHHh-hCCC------------CeEEEecccCCC---CC
Q 017967 156 QGLSGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT---VG 213 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~-----~-gd~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~---~~ 213 (363)
+.+|++|.+.+..+..... + ..+|+...-+|.+...... ..|. .+..+|..+... ++
T Consensus 118 -~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 196 (460)
T PRK06541 118 -TTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELG 196 (460)
T ss_pred -cCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccC
Confidence 9999999999876655441 2 2578887777755533221 1111 122233211000 11
Q ss_pred CC--------HHHHHHHHHcCCCCcEEEEEcCC-CCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 214 LD--------FEGMIADIKAAPGGSFILLHGCA-HNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 214 ~d--------~~~l~~~l~~~~~~~~~~~i~~p-~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
-+ ++.+++.+.....+.+..++..| +++.|...+ .+-+++|.++|+++|+++|.||++.+|.-.+ ..
T Consensus 197 ~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G---~~ 273 (460)
T PRK06541 197 DDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG---EM 273 (460)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hh
Confidence 12 35677777642223344444555 999999865 8889999999999999999999998884221 11
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
.....+ +-.++++ .|+|.++ .|+ ++|++ ++. ++
T Consensus 274 ~a~~~~-gv~PDiv---t~gK~l~-~G~~pigav--~~~-~~ 307 (460)
T PRK06541 274 FGCERF-GYVPDII---TCAKGIT-SGYSPLGAM--IAS-DR 307 (460)
T ss_pred hhhhhc-CCCCCEE---Eeccccc-CCccceeEE--EEc-HH
Confidence 122111 2223443 4899998 897 99999 765 55
No 282
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.03 E-value=7.5e-08 Score=94.44 Aligned_cols=158 Identities=11% Similarity=0.073 Sum_probs=97.8
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hh---------CCC---CeEEEecccCCCCC-CCHHHHHHH
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-ND---------ARV---PWSEYRYYDPKTVG-LDFEGMIAD 222 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~---------~G~---~~~~v~~~~~~~~~-~d~~~l~~~ 222 (363)
+++|++|.+.+..+.+.+....+|+...-+|.+..... .. .|. .+..+|..+..... -|++.+++.
T Consensus 109 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 188 (425)
T PRK09264 109 GPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKL 188 (425)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHH
Confidence 47999999999776655543467888888886654321 11 111 23344431110001 267788888
Q ss_pred HHcCC---CCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 223 IKAAP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 223 l~~~~---~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
+.+.. +....+++-.-..-.|. .++.+.+++|.++|++||+++|+||++.+|...+ .......+ +-.+++
T Consensus 189 l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG---~~~~~~~~-~v~PDi-- 262 (425)
T PRK09264 189 LEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG---TFFSFERA-GITPDI-- 262 (425)
T ss_pred HHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc---HHHHHhhc-CCCCCE--
Confidence 86422 22344444333444565 5789999999999999999999999998875432 12222211 222343
Q ss_pred EEcCccccccccccceEEEEeeCChh
Q 017967 299 AQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
-+|||.++..|+++|++ +++ ++
T Consensus 263 -~t~~K~l~~~G~pigav--~~~-~~ 284 (425)
T PRK09264 263 -VTLSKSISGYGLPMALV--LIK-PE 284 (425)
T ss_pred -EEeccccCCCccceEEE--EEc-hh
Confidence 36689999559999999 766 44
No 283
>PRK15029 arginine decarboxylase; Provisional
Probab=99.01 E-value=1.4e-08 Score=104.57 Aligned_cols=194 Identities=14% Similarity=0.066 Sum_probs=125.6
Q ss_pred Ccc-hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 125 IEG-LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 125 ~~G-~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
..| +.+..+..|+.+ +. ..-.++ ++|+|.++..+ ++..+.+||+|+++.-++-.....+...|+++++
T Consensus 203 p~G~I~eAq~~aA~~f-gA------~~t~Fl--vNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvy 271 (755)
T PRK15029 203 HTGAFGESEKYAARVF-GA------DRSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVY 271 (755)
T ss_pred CCcHHHHHHHHHHHHh-CC------CcEEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 444 455666666664 43 244555 89999997766 6777889999999999999999999999999999
Q ss_pred EecccCCC----CCCC-----HHHHHHHHHcCCCCc-------EEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 204 YRYYDPKT----VGLD-----FEGMIADIKAAPGGS-------FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 204 v~~~~~~~----~~~d-----~~~l~~~l~~~~~~~-------~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
++-.- +. .+++ ++.+++++++.|... .++++++|+ =-|+++. +++|+++|+++++.+++
T Consensus 272 l~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~d---i~~I~~~~h~~~~~llv 346 (755)
T PRK15029 272 MVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYN---AKEAQDLLEKTSDRLHF 346 (755)
T ss_pred ecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeC---HHHHHHHHHhcCCeEEE
Confidence 85321 22 3344 899999998765322 245544442 2388875 56677889999999999
Q ss_pred ecCCCCC-cCCCCCCchhHHH-HHHh-cCCeEEEEEcCccccccccccceEEEEeeCCh--hHHHHHHHHHHhh
Q 017967 268 DVAYQGF-ASGSLDNDASSVR-LFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSSS--DLAARVKSQLKRL 336 (363)
Q Consensus 268 De~y~~~-~~~~~~~~~~~~~-~~~~-~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~--~~~~~~~~~l~~~ 336 (363)
||+|... .|.+.-+....+. .... .+..++++.|..|.+ +++.-|.+.-+-.+. -..+++.+.+...
T Consensus 347 DEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~~ 418 (755)
T PRK15029 347 DEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMH 418 (755)
T ss_pred ECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHHH
Confidence 9998654 3432111001110 0001 345679999999988 477777664443321 1234566655544
No 284
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.99 E-value=5.9e-08 Score=94.19 Aligned_cols=216 Identities=13% Similarity=0.025 Sum_probs=127.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.-...-|+. .|.+.+++.+.+.... ..+ .....+....+|+++....+ .+++.+ +++|++|
T Consensus 37 ~~lD~~sg~~~~~lGh~--~p~v~~a~~~q~~~~~-~~~--~~~~~~~~~~la~~l~~~~~----~~~v~f--~~SGseA 105 (395)
T PRK03715 37 RYLDFIQGWAVNCLGHC--NPGMVEALAAQAEKLI-NPS--PAFYNEPMAKLAGLLTQHSC----FDKVFF--ANSGAEA 105 (395)
T ss_pred EEEECCcChhhccCCCC--CHHHHHHHHHHHHhcc-ccc--ccccCHHHHHHHHHHhhccC----CCEEEE--eCCcHHH
Confidence 78898865432223333 3566666655543211 111 12234566778888754321 257877 9999999
Q ss_pred HHHHHHHHHHhC----CC-CEEEEcCCCCcchHH-HHhhCCCCeE---EEecccC--CCCCCCHHHHHHHHHcCCCCcEE
Q 017967 164 LRLAAALIERYF----PG-AKVLISSPTWGNHKN-IFNDARVPWS---EYRYYDP--KTVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 164 l~l~~~l~~~~~----~g-d~Vlv~~P~y~~~~~-~~~~~G~~~~---~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
.+.+..+...+. +| .+|+..+.+|.+... .+...|.... ..|.... .....|++.+++.+. +...+
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aa 182 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKTVA 182 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCceE
Confidence 999876655431 34 578888888866543 2333332211 1111000 001246888888875 23555
Q ss_pred EEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccc
Q 017967 233 LLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (363)
Q Consensus 233 ~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~ 311 (363)
+++...++..|... +.+.+++|.++|+++|+++|+||++.+|.-.+ ..+....+ .-.+++ .+|+|.+| .|+
T Consensus 183 vi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG---~~~a~~~~-gv~PDi---~t~gK~lg-~G~ 254 (395)
T PRK03715 183 VMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG---TLFAYELS-GIEPDI---MTLGKGIG-GGV 254 (395)
T ss_pred EEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc---chhhHhhc-CCCCce---eeehhhhh-CCc
Confidence 55554555556654 68889999999999999999999999874332 11122211 222333 47789998 688
Q ss_pred cceEEEEeeCChh
Q 017967 312 RIGAMNVVCSSSD 324 (363)
Q Consensus 312 RvG~i~~v~~~~~ 324 (363)
-+|.+ ++. ++
T Consensus 255 p~~av--~~~-~~ 264 (395)
T PRK03715 255 PLAAL--LAK-AE 264 (395)
T ss_pred ceEEE--EEc-cc
Confidence 89988 655 44
No 285
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.93 E-value=1.9e-07 Score=92.50 Aligned_cols=210 Identities=19% Similarity=0.155 Sum_probs=125.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|.-...-|+ -.+.+.+++.+.++......+ +. +....+|+.+..... . .+++.+ +++|++|
T Consensus 100 ~yiD~~~g~g~~~lGh--~~p~v~~av~~ql~~~~~~~~-~~----~~~~~lAe~l~~~~p-~--~~~v~f--~~SGsEA 167 (474)
T PLN02482 100 EYIDYVGSWGPAIIGH--ADDEVLAALAETMKKGTSFGA-PC----LLENVLAEMVIDAVP-S--VEMVRF--VNSGTEA 167 (474)
T ss_pred EEEEecccccccccCC--CCHHHHHHHHHHHhhCCCCCC-CC----HHHHHHHHHHHHhCC-C--CCEEEE--eCChHHH
Confidence 7888876642222222 245666666665543321211 22 233444555433221 1 368877 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-h--C-----------CCC------eEEEecccCCCCCCCHHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D--A-----------RVP------WSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~--~-----------G~~------~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
.+.+.++.+.+...++|+...-+|.++...+. . . |+. +..+|. -|++.+++.+
T Consensus 168 ~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l 240 (474)
T PLN02482 168 CMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLF 240 (474)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHH
Confidence 99997765555444678888888877543211 1 0 110 111111 1688899888
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
...++....+++-.-..-.|.+.+ .+-+++|.++|+++|+++|+||+..+|..+. ......+ .-.+++ ..|
T Consensus 241 ~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~----~ga~~~~-gv~PDi---~t~ 312 (474)
T PLN02482 241 EANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY----GGAQEYF-GITPDL---TTL 312 (474)
T ss_pred HhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc----chHhHHh-CCCCCE---EEe
Confidence 754444555554444444576554 6789999999999999999999988874431 1122112 222343 477
Q ss_pred ccccccccccceEEEEeeCChh
Q 017967 303 SKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+|.+| .|+-+|.+ ++. ++
T Consensus 313 gK~lg-gG~Pigav--~g~-~e 330 (474)
T PLN02482 313 GKVIG-GGLPVGAY--GGR-RE 330 (474)
T ss_pred cchhh-CCCceEEE--EEc-HH
Confidence 99998 89999999 554 66
No 286
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.93 E-value=1.3e-07 Score=92.93 Aligned_cols=210 Identities=13% Similarity=0.083 Sum_probs=140.6
Q ss_pred CccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hC--
Q 017967 99 QPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YF-- 175 (363)
Q Consensus 99 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~-- 175 (363)
++.+.+...+.+...+.... .......+..++.+.+..++....+.+ +......|.|||+|..++....+. ..
T Consensus 71 ~~~~~~~a~~~~~~~~~~nl-~d~~~~p~a~~~E~~~v~~l~~l~~~~---~~~~G~~t~GgTean~lal~aar~~~~~~ 146 (460)
T COG0076 71 PTRVPPVAAELLVSALNKNL-GDPDESPAAAELEERVVNMLSDLLGAP---EEASGTFTSGGTEANLLALLAARERWRKR 146 (460)
T ss_pred CCCCHHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCC---CCCceEEEcChHHHHHHHHHHHHHHHHHH
Confidence 35566677776666554322 111122366778888888876665554 233233489999998876433222 11
Q ss_pred C---CC------EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCC
Q 017967 176 P---GA------KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP 246 (363)
Q Consensus 176 ~---gd------~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~ 246 (363)
. +. .|+++.-.+..+...+...|+....+++... +..+|++++++++.+..... +++-.-+.-|||.+
T Consensus 147 ~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g-~vV~~aGtT~~G~i- 223 (460)
T COG0076 147 ALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGG-VVVGTAGTTDTGSI- 223 (460)
T ss_pred hhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCc-eEEEEecCCCCCcc-
Confidence 1 11 5888988999999999999999999998543 78999999999998633221 24445678889965
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE-EEcCccccccccccceEEEEeeCChh
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV-AQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~-~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+++++|.++|+++++++.+|.+|.++...-.+++.. +...-+.+.. .-++.|.+ +.=.-.||+ +..|++
T Consensus 224 --Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~----~~f~l~~vdSIt~d~HK~g-~aP~~~G~i--l~rd~e 293 (460)
T COG0076 224 --DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR----WDFGLEGVDSITVDGHKYG-LAPIGCGVV--LFRDEE 293 (460)
T ss_pred --CCHHHHHHHHHHcCCcEEEEccccceeecccCccch----hhcCCCCceEEEECccccc-CCCCCceEE--EEECHH
Confidence 788889999999999999999999886421111111 1122234433 45789965 466778999 888775
No 287
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.91 E-value=4.2e-08 Score=93.97 Aligned_cols=190 Identities=12% Similarity=-0.028 Sum_probs=114.3
Q ss_pred CCccccHHHHHHHHHHHccC---CCCCCCCC-------cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc-hhHHHHH
Q 017967 98 LQPYVLDVVKKAENLMLERG---ENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRL 166 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~---~~~~Y~~~-------~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g-gt~al~l 166 (363)
++..+++.|.+++.+..... ....|... .-..+.|+.+++++... ++++|++ |.| +|++++.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~-----~~~~vvf--~~gs~T~a~~~ 78 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIP-----DNYKVLF--LQGGATGQFAA 78 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHH
Confidence 55667888888887765210 00111111 23567888899887532 2567877 877 9999999
Q ss_pred HHHHHHHhC---CCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCC-C-HHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 167 AAALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL-D-FEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 167 ~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~-d-~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+ +..++. +||.|++ .|....+...+++.|++++.++.++ ++.. + ++..+..++ ++++++.+++..|.
T Consensus 79 ~--~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~--~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~ 150 (355)
T cd00611 79 V--PLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKE--EGKYTKIPDVETWDLA---PDAAYVHYCSNETI 150 (355)
T ss_pred H--HHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEeccc--ccCCCCCCCHhhcCCC---CCCCEEEEeCCccc
Confidence 9 444455 4444443 3333333447788999999998732 2122 3 222222233 34667788899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||..++ ++++.+|+++++|.+ +.+...+. .+..+ + +.+.|--|.+|.+| +|.+ +..
T Consensus 151 tG~~~~--------~i~~~~g~~~~VDa~-qs~g~~~i-----dv~~~-----~-~~~ss~~K~lGP~G--~g~l--~~~ 206 (355)
T cd00611 151 HGVEFD--------EVPDTGGVPLVADMS-SNILSRPI-----DVSKF-----G-VIYAGAQKNLGPAG--VTVV--IVR 206 (355)
T ss_pred ccEEcc--------eecccCCCeEEEEcc-ccccCCCC-----CHHHh-----C-EEEeecccccCCCc--eEEE--EEC
Confidence 999743 235569999999999 44433211 12111 2 35566799999777 5777 554
Q ss_pred ChhHHH
Q 017967 322 SSDLAA 327 (363)
Q Consensus 322 ~~~~~~ 327 (363)
++.++
T Consensus 207 -~~~~~ 211 (355)
T cd00611 207 -KDLLG 211 (355)
T ss_pred -HHHHh
Confidence 55433
No 288
>PLN02263 serine decarboxylase
Probab=98.91 E-value=3.3e-08 Score=96.51 Aligned_cols=182 Identities=13% Similarity=0.039 Sum_probs=124.8
Q ss_pred chHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
+..++.+.+.+|+.+..+.+ +++.....|.|||+|.-++....+...+...|++++-++..+..+++.+|++++.+|+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p--~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIE--KNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCC--CCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence 56788888888877666543 2221112389999997776333322335557888999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCC-----eEEEecCCCCCcCCCCCC
Q 017967 207 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH-----IPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 207 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~-----~ii~De~y~~~~~~~~~~ 281 (363)
+ +++.+|++.|++++.++..++.+++.+-+.-+||.+ +++++|.++|+++|+ ++-+|.+|.++.....+
T Consensus 208 d--~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~- 281 (470)
T PLN02263 208 L--VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK- 281 (470)
T ss_pred C--CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc-
Confidence 4 468999999999998654446677667788899986 667778888999986 99999999887542110
Q ss_pred chhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 282 ~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
..+.+ .+.. .-+. +.-+..|.++ .-+-.|.+ +..+
T Consensus 282 ~~~~~-df~~-~vDS-IsvD~HK~l~-~P~~cgvl--l~R~ 316 (470)
T PLN02263 282 RAPKV-TFKK-PIGS-VSVSGHKFVG-CPMPCGVQ--ITRM 316 (470)
T ss_pred ccccc-CCCc-CccE-EEECCccccC-CCcCEEEE--EEeh
Confidence 11011 1111 1111 2456789776 55667777 5553
No 289
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.90 E-value=1.2e-07 Score=93.78 Aligned_cols=212 Identities=14% Similarity=0.062 Sum_probs=120.5
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC---Ccc------hHH-HHHHHHHHH
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEG------LAA-FNKVTAELL 139 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~G------~~~-lr~aia~~l 139 (363)
+.++....+..+ .+.|+|-..++ .+.+.+++++...+......+++. ..| +.+ .|+.+++++
T Consensus 22 ~~~~~~~~~~~~-~~~l~l~~sen-------~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf 93 (452)
T PTZ00094 22 LYELIEKEKERQ-IEGLELIASEN-------FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF 93 (452)
T ss_pred HHHHHHHHHHHH-HcCeeEecccc-------cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 444444332222 36899987764 245677777655542211011111 112 221 455777776
Q ss_pred hcCCCCcccCCcEEE-EeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh----------CCCCeEEEeccc
Q 017967 140 FGADNSVLKEQRVAT-VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----------ARVPWSEYRYYD 208 (363)
Q Consensus 140 ~~~~~~~~~~~~i~~-~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----------~G~~~~~v~~~~ 208 (363)
... ++++.+ +++.+|+.+..++ +..++.+||+|++....+..+...... .++++..++.+
T Consensus 94 ~a~------~~~~~~~~~~~sgt~an~~v--~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~- 164 (452)
T PTZ00094 94 GLD------PEEWGVNVQPYSGSPANFAV--YTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN- 164 (452)
T ss_pred CCC------cccceeecCCCchHHHHHHH--HHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC-
Confidence 443 345433 2347889898776 455577999999987776655433211 11233444443
Q ss_pred CCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcC-CCCCCchhHHH
Q 017967 209 PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS-GSLDNDASSVR 287 (363)
Q Consensus 209 ~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~ 287 (363)
.++.+|++.+++.+++. ++.++++. ++.+|...+.+++ .++|+++|+++++|++..--.. .+.. ..+
T Consensus 165 -~~g~id~~~L~~~l~~~--~~~lvi~~--~s~~g~~~di~~I---~~i~~~~ga~l~vDaaq~~G~i~~~~~--~~~-- 232 (452)
T PTZ00094 165 -EKGLIDYDKLEELAKAF--RPKLIIAG--ASAYPRDIDYKRF---REICDSVGAYLMADIAHTSGLVAAGVL--PSP-- 232 (452)
T ss_pred -CCCCcCHHHHHHHHHHh--CCCEEEEe--CCCCCCccCHHHH---HHHHHHcCCEEEEeccchhccccCCCC--CCC--
Confidence 34789999999999642 23344433 3458988776655 5569999999999999432211 1100 001
Q ss_pred HHHhcCCeEEEEEcCccccccccccceEE
Q 017967 288 LFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 288 ~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
.. .-.+++.|..|.++ |-+-|++
T Consensus 233 --~~--~~D~l~~S~hK~l~--GP~Gg~l 255 (452)
T PTZ00094 233 --FP--YADVVTTTTHKSLR--GPRSGLI 255 (452)
T ss_pred --CC--CCcEEEcCCccCCC--CCCceEE
Confidence 01 23477999999774 3444777
No 290
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.90 E-value=1.3e-07 Score=100.10 Aligned_cols=162 Identities=11% Similarity=0.060 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchh----HHHHHHHHHHHHhC-CCC----EEEEcCCCCcchHHHHhhCCC
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGT----GSLRLAAALIERYF-PGA----KVLISSPTWGNHKNIFNDARV 199 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt----~al~l~~~l~~~~~-~gd----~Vlv~~P~y~~~~~~~~~~G~ 199 (363)
.++|+.+++++ + . ++|.+ +.+++ .++.++ +..... +|| .|+++...+......+...|+
T Consensus 571 ~~~r~~la~i~-g---~----~~v~f--~pnaga~ge~a~~~v--i~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~ 638 (993)
T PLN02414 571 EDLGDLLCEIT-G---F----DSFSL--QPNAGAAGEYAGLMV--IRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGM 638 (993)
T ss_pred HHHHHHHHHHh-C---C----CeEEE--cCCCcHHHHHHHHHH--HHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCC
Confidence 45667777764 2 1 78877 77777 676666 334454 488 899999999888888888999
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++++ .++.+|+++|++.++++.++++++++++|+|-+|...+ +++|.++|+++|.++++|.+..--... .
T Consensus 639 ~vv~v~~d--~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~~-l 712 (993)
T PLN02414 639 KIVVVGTD--AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQVG-L 712 (993)
T ss_pred EEEEeccC--CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHhccC-c
Confidence 99999984 46789999999999854445788888999999998754 667777899999999999995221101 0
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccc----cccccceEE
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAM 316 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~----l~G~RvG~i 316 (363)
. . .....-.++..|..|.|+ ..|-.+|.+
T Consensus 713 ~----~----p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l 745 (993)
T PLN02414 713 T----S----PGFIGADVCHLNLHKTFCIPHGGGGPGMGPI 745 (993)
T ss_pred C----C----ccccCCCEEEecCCccCCcCcccCCCCeeeE
Confidence 0 0 011133466777888665 234457888
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.88 E-value=3e-07 Score=90.50 Aligned_cols=256 Identities=13% Similarity=0.064 Sum_probs=133.4
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+++ .++|+..|.-...-|+ -.+.+.+++.+.+.... + +....-..+....+|+.+....... ..+++.+ +.
T Consensus 51 ~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~-~-~~~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f--~~ 122 (441)
T PRK05769 51 VDGN-VYLDFNAGIAVTNVGH--AHPKVVKAVKEQAEKFL-H-YSLTDFYYEPAVELAERLVEIAPGG-FEKKVFF--TN 122 (441)
T ss_pred CCCC-EEEECCCchhhcccCC--CCHHHHHHHHHHHHhcc-C-ccCcccCCHHHHHHHHHHHHhCCCC-CCCEEEE--CC
Confidence 3443 7888877643222222 23456556555543211 1 1000001123344444443321100 1257877 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCC-------------CeEEEecccCCC--CC-C-------
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPKT--VG-L------- 214 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~~~--~~-~------- 214 (363)
+|++|.+.+..+........+|+...-+|.+..... ...|. .+..++..+... ++ -
T Consensus 123 SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (441)
T PRK05769 123 SGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGN 202 (441)
T ss_pred chHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHH
Confidence 999999999766555544467888888886664322 11111 122333210000 01 0
Q ss_pred -CHHHHHH-HHHc--CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 215 -DFEGMIA-DIKA--APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 215 -d~~~l~~-~l~~--~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
+++.+++ .++. .++....+++-.-+.-.|.. .+.+.+++|.++|+++|+++|.||++.+|...+ .......+
T Consensus 203 ~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G---~~~a~~~~ 279 (441)
T PRK05769 203 AVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG---KMFAIEHF 279 (441)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---ceehhhcc
Confidence 1234555 2221 22334444443334445664 457889999999999999999999999875432 11122222
Q ss_pred HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.-.++++ .|||.++ .|+++|++ ++. ++ +...+......++ +.+++++.++...|+.
T Consensus 280 -gv~pDiv---t~~K~l~-~G~p~gav--~~~-~~----i~~~~~~~~~~T~-~g~p~~~aaa~a~L~~ 335 (441)
T PRK05769 280 -GVEPDII---TLAKAIA-GGLPLGAV--IGR-AE----LMFLPPGSHANTF-GGNPVAAAAALATLEE 335 (441)
T ss_pred -CCCCCEE---EEccccc-CCcccEEE--EEe-hh----hhhcCCCCCCCCC-CcCHHHHHHHHHHHHH
Confidence 2223444 4799999 89999998 665 44 3332222222333 3467777776655543
No 292
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.86 E-value=3.5e-07 Score=89.85 Aligned_cols=213 Identities=16% Similarity=0.070 Sum_probs=120.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-...-|+ -.|.|.+++.+.+.. .....|.......+|.+.+++..-. ..+++.+ +++|++
T Consensus 76 ~ylD~~~g~~~~~lGh--~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~------~~~~v~f--~~SGsE 145 (442)
T TIGR03372 76 EFIDCLGGFGIFNVGH--RNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPG------KLKYSFF--CNSGTE 145 (442)
T ss_pred EEEECCccHHhhhcCC--CCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCC------CcCEEEE--eCCchH
Confidence 6888866621111122 234555555544432 1112233333334455555544211 1256767 999999
Q ss_pred HHHHHHHHHHHhC--CC-CEEEEcCCCCcchHHHHh-hCCC------------CeEEEecccCCCCCCCHHHHHHHHHc-
Q 017967 163 SLRLAAALIERYF--PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKTVGLDFEGMIADIKA- 225 (363)
Q Consensus 163 al~l~~~l~~~~~--~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~~~~d~~~l~~~l~~- 225 (363)
|.+.+..+.+... .| .+|+...-+|.+...... ..|- .+..+|. .|.+.+++.+..
T Consensus 146 A~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~~l~~~ 218 (442)
T TIGR03372 146 SVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLKALNEC 218 (442)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHHHHHHH
Confidence 9999977665553 24 578888888866543222 1111 1122222 256777776642
Q ss_pred --CCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 226 --APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 226 --~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
.+.+...+++-.-+.--|... +++-++++.++|+++|+++|.||+..+|.-.+ ..+....+ .-.++++ .|
T Consensus 219 ~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~-gv~PDiv---t~ 291 (442)
T TIGR03372 219 KKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG---KMFACEHE-GVQPDIL---CL 291 (442)
T ss_pred hcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc---cchhhhhc-CCCCCee---ee
Confidence 233344555444444456654 57788999999999999999999988774322 12232222 2223443 38
Q ss_pred cccccccc-ccceEEEEeeCChh
Q 017967 303 SKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 303 SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
+|.+| .| +-+|.+ ++. ++
T Consensus 292 gK~lg-~G~~Pigav--v~~-~~ 310 (442)
T TIGR03372 292 AKALG-GGVMPIGAT--IAT-EA 310 (442)
T ss_pred hhhhc-CCcccceEE--Eec-HH
Confidence 99998 78 689998 665 55
No 293
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.85 E-value=6.7e-07 Score=87.78 Aligned_cols=217 Identities=17% Similarity=0.087 Sum_probs=124.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|.-...-|+ -.+.+.+++.+.+.......+ +.....+|-+.+++.+ . ..+++.+ +.+|++|
T Consensus 54 ~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~l~~~~----p---~~~~v~f--~~sGseA 121 (428)
T PRK12389 54 KYIDYLAAYGPIITGH--AHPHITKAITEAAENGVLYGT-PTELEIEFAKMLKEAI----P---SLEKVRF--VNSGTEA 121 (428)
T ss_pred EEEEccccccccccCC--CCHHHHHHHHHHHHhCCccCC-CCHHHHHHHHHHHHhC----C---CCcEEEE--eCCHHHH
Confidence 7888866642222222 235566666555543221222 2223334444444432 1 1357877 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCCCeE--------EEec-ccCCC---CCCCHHHHHHHHHcCCCCc
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWS--------EYRY-YDPKT---VGLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~~~~--------~v~~-~~~~~---~~~d~~~l~~~l~~~~~~~ 230 (363)
.+.+..+.+.+....+|+...-+|.+....+ ...|.... .++. ..++. ...|++.+++.+.+..+..
T Consensus 122 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 201 (428)
T PRK12389 122 VMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEV 201 (428)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcE
Confidence 9999776555544467888888887754322 22221110 0000 00000 0126889988887544444
Q ss_pred EEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 231 FILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
..+++-.-+.-.|... +.+-+++|.++|+++|+++|.||+..+|.... . .......-.+++ -+|+|.+| .
T Consensus 202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~----~-~a~~~~gv~PDi---vt~gK~lg-g 272 (428)
T PRK12389 202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY----G-GAQDLLGVEPDL---TALGKIIG-G 272 (428)
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc----c-hhhHHhCCCCCe---eeechhhc-C
Confidence 4555444455557554 67789999999999999999999998884321 1 111111222343 37799998 7
Q ss_pred cccceEEEEeeCChh
Q 017967 310 AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G~RvG~i~~v~~~~~ 324 (363)
|+-+|.+ ++. ++
T Consensus 273 G~Pi~av--~~~-~~ 284 (428)
T PRK12389 273 GLPIGAY--GGR-KD 284 (428)
T ss_pred CCceeEE--eEH-HH
Confidence 8999998 554 66
No 294
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.84 E-value=6.1e-07 Score=87.98 Aligned_cols=222 Identities=14% Similarity=0.068 Sum_probs=121.8
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+++ .+||+..|.-...-|+ -.+.+.+++.+.++......+ +.....+|-+.+.+.+ . ...+++.+ +.
T Consensus 50 ~dG~-~yiD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~L~~~~----~--~~~~~v~f--~~ 117 (433)
T PRK00615 50 SLGK-TFIDFCGSWGSLIHGH--SHPKICDAIQQGAERGTSYGL-TSEQEILFAEELFSYL----G--LEDHKIRF--VS 117 (433)
T ss_pred CCCC-EEEEcccchhccccCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhC----C--CCcCEEEE--eC
Confidence 3443 7888876642221222 245566665555533221222 2223344455554442 1 11257877 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCC---e-EEE--ecccCCC---CCCCHHHHHHHHHc
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVP---W-SEY--RYYDPKT---VGLDFEGMIADIKA 225 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~---~-~~v--~~~~~~~---~~~d~~~l~~~l~~ 225 (363)
+|++|.+.+..+.+.+....+|+...-+|.++... ....+-. . ... +...... ..-|++.+++.+..
T Consensus 118 SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 197 (433)
T PRK00615 118 SGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNS 197 (433)
T ss_pred chHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHh
Confidence 99999999976655443336788888788775311 1111100 0 000 0000000 01267889888875
Q ss_pred CCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc
Q 017967 226 APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 304 (363)
..++...+++-....-.|... +.+-+++|.++|++||+++|.||+..+|..+. .... ....-.++++ .|+|
T Consensus 198 ~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~----~ga~-~~~gv~PDi~---~~gK 269 (433)
T PRK00615 198 LGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQ----GGAA-AIYHVKPDIT---VYGK 269 (433)
T ss_pred cCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccH----hHHH-HhcCCCCCeE---EEcc
Confidence 433344444433333346544 46778899999999999999999998884331 1122 1112223443 3899
Q ss_pred ccccccccceEEEEeeCChh
Q 017967 305 NLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 305 ~~~l~G~RvG~i~~v~~~~~ 324 (363)
.+| .|+-+|++ ++. ++
T Consensus 270 ~lg-gG~p~~av--~~~-~~ 285 (433)
T PRK00615 270 ILG-GGLPAAAV--VAH-KS 285 (433)
T ss_pred ccc-CCcceeee--eec-HH
Confidence 998 67878888 554 66
No 295
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.84 E-value=2.5e-07 Score=90.77 Aligned_cols=229 Identities=16% Similarity=0.096 Sum_probs=127.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCC-----C-CCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-----E-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~-Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+.|+|-..++ ++.+.+++++...+...... + |.......++.....+.....++..+ -+ +|.
T Consensus 50 ~~l~LiasEN-------~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~--an---vqp 117 (493)
T PRK13580 50 SSLKLIASEN-------YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH--AY---VQP 117 (493)
T ss_pred cCceEecccc-------cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc--cc---ccC
Confidence 6788876654 34677777765544222112 2 22233334443333333322222221 23 456
Q ss_pred cchhHHHHHHHHHHHHhCC-------------------------------CCEEEEcCCCCcchHHH-----HhhCCCCe
Q 017967 158 LSGTGSLRLAAALIERYFP-------------------------------GAKVLISSPTWGNHKNI-----FNDARVPW 201 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~-------------------------------gd~Vlv~~P~y~~~~~~-----~~~~G~~~ 201 (363)
.+|+.|...+ +..++.| ||+|+..++..+++... +.....+.
T Consensus 118 ~Sg~~An~~v--~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~ 195 (493)
T PRK13580 118 HSGADANLVA--FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQ 195 (493)
T ss_pred CCcHHHHHHH--HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeee
Confidence 7888887666 5556655 79999998777655322 11122456
Q ss_pred EEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCC
Q 017967 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 281 (363)
+.++++ .+++.+|.+.+++.+++ .++++++ +..+|=++ ..+ +++|.++|+++|.++++|++..--..+..
T Consensus 196 ~~y~vd-~~~g~iD~d~l~~~~~~--~~plvii-~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~-- 265 (493)
T PRK13580 196 RSYGVD-PDTGLLDYDEIAALARE--FKPLILV-AGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAGK-- 265 (493)
T ss_pred EecccC-cccCccCHHHHHHHHhh--cCCEEEE-eCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceeccc--
Confidence 667774 34678999999999985 3344444 55555444 444 66667779999999999999543222210
Q ss_pred chhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchH
Q 017967 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPM 347 (363)
Q Consensus 282 ~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~ 347 (363)
... ..+-....-.++++|++|.+. |-+.|++ .+. ++ +++.+.......++++..+
T Consensus 266 -~~~-~~~~~~~~~D~vtgT~hKaL~--GP~GG~I--~~~-~~----l~~~L~~a~P~i~gg~l~p 320 (493)
T PRK13580 266 -VFT-GDEDPVPHADIVTTTTHKTLR--GPRGGLV--LAK-KE----YADAVDKGCPLVLGGPLPH 320 (493)
T ss_pred -cch-hhcCCCCCCcEEEeCChhhcc--CCCeEEE--Eec-HH----HHHHHhhCCCcccCCCccH
Confidence 000 000001123478999999883 4455777 554 66 4555543333344444444
No 296
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.83 E-value=1.4e-07 Score=85.28 Aligned_cols=150 Identities=14% Similarity=0.184 Sum_probs=104.3
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCC-Cc-chHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPT-WG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 234 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~-y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 234 (363)
...|+.+.+.+ +.+++.|||.|++..-+ |. .+....+++|++|..++. +.+....++.+.+.+.. .+.++++
T Consensus 74 sgsGh~g~E~a--l~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsq--h~p~~vf 147 (385)
T KOG2862|consen 74 SGSGHSGWEAA--LVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQ--HKPKAVF 147 (385)
T ss_pred ecCCcchHHHH--HHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHh--cCCceEE
Confidence 67789998888 77888899999887764 43 235567899999999976 45778899999999986 4566777
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc-ccccc
Q 017967 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERI 313 (363)
Q Consensus 235 i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~Rv 313 (363)
++....-||+..+. ++.+-++|++|+.++++|.+-+ +...+..- -+-+.++.+.+| =|.+|. +|+
T Consensus 148 v~hgdsSTgV~q~~--~~~~g~lc~k~~~lllVD~VaS-lggt~F~m--------DewgVDvaytgS-QKaL~aP~GL-- 213 (385)
T KOG2862|consen 148 VTHGDSSTGVLQDL--LAISGELCHKHEALLLVDTVAS-LGGTEFEM--------DEWGVDVAYTGS-QKALGAPAGL-- 213 (385)
T ss_pred EEecCccccccchH--HHHHHHHhhcCCeEEEEechhh-cCCcccee--------hhhcccEEEecc-hhhcCCCCCc--
Confidence 78888889998762 3334456999999999999943 22211111 123346666666 688876 454
Q ss_pred eEEEEeeCChhHHHHH
Q 017967 314 GAMNVVCSSSDLAARV 329 (363)
Q Consensus 314 G~i~~v~~~~~~~~~~ 329 (363)
+-+ +.++...+++
T Consensus 214 sii---sfS~ka~~~~ 226 (385)
T KOG2862|consen 214 SII---SFSDKALEAI 226 (385)
T ss_pred cee---ecCHHHHHHH
Confidence 334 5556533333
No 297
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.81 E-value=2.3e-07 Score=97.92 Aligned_cols=171 Identities=11% Similarity=0.092 Sum_probs=110.9
Q ss_pred hHHHHHHHHHHHhcCCCCcccCC--cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---HHhhCCCCeE
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWS 202 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~--~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~ 202 (363)
..+.|+.+|+++... ++ .|++ |.|+|+|+++++..+. +.+||.|++..-.|..... .++..|+++.
T Consensus 80 ~e~aR~~ia~~lga~------~~~~~VvF--tsnaT~alnlva~~l~-~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFNAP------PSDYACVF--TSGATAALKLVGETFP-WSSESHFCYTLENHNSVLGIREYALEKGAAAI 150 (805)
T ss_pred HHHHHHHHHHHhCCC------ccceEEEE--eCChHHHHHHHHHHCC-CCCCCeEEEeeccccchHHHHHHHHHcCCeEE
Confidence 568889999997543 33 4666 9999999999954432 5689999998766655443 3456799999
Q ss_pred EEecccC------CCCCCCH--HHHHHHHH----c---CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc-----C
Q 017967 203 EYRYYDP------KTVGLDF--EGMIADIK----A---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK-----N 262 (363)
Q Consensus 203 ~v~~~~~------~~~~~d~--~~l~~~l~----~---~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~-----~ 262 (363)
.++++.+ ....+++ +.+++.++ . ..++++++.++..+|-||..++.+++.++.+.+.++ +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 9887411 1122332 55665532 0 013456888899999999999998655444333222 3
Q ss_pred CeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeC
Q 017967 263 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCS 321 (363)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~ 321 (363)
+++++|.+ +....... .+ ...+-.+++.|+-|.+| -.| +|++ +..
T Consensus 231 ~~v~vDaa-Q~~g~~pi-----Dv----~~~~~Dfl~~S~HK~~GgP~G--~G~L--~vr 276 (805)
T PLN02724 231 WMVLLDAA-KGCGTSPP-----DL----SRYPADFVVVSFYKIFGYPTG--LGAL--LVR 276 (805)
T ss_pred eEEEeehh-hhcCCCCC-----Ch----hhcCCCEEEEecceeccCCCC--ceEE--EEe
Confidence 67999988 43332211 11 12245688899999988 345 6888 555
No 298
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.79 E-value=2.1e-07 Score=83.62 Aligned_cols=169 Identities=19% Similarity=0.216 Sum_probs=119.9
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEE-EcCCCCcchHHHH--------
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL-ISSPTWGNHKNIF-------- 194 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vl-v~~P~y~~~~~~~-------- 194 (363)
+.-|-..|.+-.|+.+... .-++-.|..+||+|+..+ ++..++|||..+ +..--|....+++
T Consensus 63 dD~GRdtLe~vyA~vf~aE-------~a~VRpq~isGTHAI~~a--Lfg~LRpgDell~i~G~PYDTLeevIG~rg~~~g 133 (416)
T COG4100 63 DDLGRDTLERVYAQVFGAE-------AALVRPQIISGTHAIACA--LFGILRPGDELLYITGSPYDTLEEVIGLRGEGQG 133 (416)
T ss_pred cccchhHHHHHHHHHhccc-------cceeeeeeecchhHHHHH--HHhccCCCCeEEEecCCcchhHHHHhccCCCCcc
Confidence 4556677777777776443 444556679999998777 888899999854 4445566666544
Q ss_pred --hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc--CCeEEEecC
Q 017967 195 --NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVA 270 (363)
Q Consensus 195 --~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~De~ 270 (363)
+.+|+.+..+|+. .++.+|.+.+++.+++ +.+++.+.-+...-.--.++.+|+++++++.++- |+++++|++
T Consensus 134 SL~dfgi~Y~~v~Lt--~~gkiD~~~v~~~i~~--~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNC 209 (416)
T COG4100 134 SLKDFGIKYKAVPLT--ADGKIDIQAVKTAISD--RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNC 209 (416)
T ss_pred cHHHhCcceeecccc--cCCcccHHHHHHhcCc--cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 5788899999884 4678999999999983 3344444444555445568899999999999974 699999999
Q ss_pred CCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc--ceEE
Q 017967 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER--IGAM 316 (363)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R--vG~i 316 (363)
|.+|...- ++... .-.+..+|+-|+-| .|+- -||+
T Consensus 210 YGEFvE~~-EPt~v---------GaDliAGSLIKNpG-GgiaktGGYi 246 (416)
T COG4100 210 YGEFVEEK-EPTHV---------GADLIAGSLIKNPG-GGIAKTGGYI 246 (416)
T ss_pred chhhhhcc-Ccccc---------chhhhccceeeCCC-Cceeecccee
Confidence 99998652 21111 22366899999887 4442 2666
No 299
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.76 E-value=4.3e-07 Score=80.61 Aligned_cols=176 Identities=16% Similarity=0.047 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecc
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY 207 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 207 (363)
+..|.+.+++|+.. +.+-+ |.|+.++-..+ +-.++.+||.|++....+....-+++++|.++..+|-.
T Consensus 63 I~~F~~dlaeFlg~--------D~~R~--t~GARe~Kfav--Mhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~t 130 (382)
T COG1103 63 IKDFLEDLAEFLGM--------DEVRV--TAGAREAKFAV--MHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNT 130 (382)
T ss_pred HHHHHHHHHHHhCC--------ceeee--cccchhhHHHH--HHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCC
Confidence 45788889999743 34444 99999998877 66778899999999987666666789999999999965
Q ss_pred cCCCCCCCHHHHHHHHHc----CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 208 DPKTVGLDFEGMIADIKA----APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 208 ~~~~~~~d~~~l~~~l~~----~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
...++.+++|...+.+.+ ..+.+++.+++++ .|..=+..+-++++++|+++++.++...+|.--.-.
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~---Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmp------ 201 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHV---DGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMP------ 201 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEecc---CCCcCCchhhHHHHHHHHHcCCceEeecceeecccc------
Confidence 566789999988877765 2133556666554 455556778899999999999999999998643211
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHH
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ 332 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~ 332 (363)
.+.+ .-...++++|-.|++.. .--+|.+ +-.++..+.+.+.
T Consensus 202 vs~k----e~g~DFiVgSGHKsmAA-s~PiGvl---~~~eE~ae~V~r~ 242 (382)
T COG1103 202 VSGK----EIGADFIVGSGHKSMAA-SAPIGVL---AMSEEWAEIVLRR 242 (382)
T ss_pred cccc----ccCCCEEEecCccchhc-cCCeeEE---eehhHHHHHHHhh
Confidence 1111 12345889999999974 4459988 4457766655443
No 300
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.76 E-value=1e-06 Score=84.51 Aligned_cols=204 Identities=12% Similarity=0.122 Sum_probs=121.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|+. .+.+.+++.+.++.. ....| ......+|.+.++++. . .+++.+ +++|+
T Consensus 25 ~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~la~~l~~~~-~-------~~~v~~--~~SGs 91 (364)
T PRK04013 25 RYLDLIAGIGVNVLGHN--HPEWVEEMSEQLEKLVVAGPMF-EHEEKEEMLEELSKWV-N-------YEYVYM--GNSGT 91 (364)
T ss_pred EEEEcccChhhccCCCC--CHHHHHHHHHHHHhcCCccCCc-CCHHHHHHHHHHHhhc-C-------CCEEEE--eCchH
Confidence 78888766422222222 234445554444321 11123 2334455666666653 1 257777 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh--------CCCC-----eEEEecccCCCCCCCHHHHHHHHHcCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND--------ARVP-----WSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~--------~G~~-----~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (363)
+|++.+..+.......++|+...-+|.+....... .+.. +..+|. .|++.+++.+. +
T Consensus 92 eA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~---~ 161 (364)
T PRK04013 92 EAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAIT---K 161 (364)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhc---C
Confidence 99999977655443338999999888776432221 1111 122221 26788888875 2
Q ss_pred CcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 229 GSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
+...+++-.-+.-.|. ..+.+-+++|.++|+++|+++|+||+..++..+. ......+ .-.+++++ |+|.+|
T Consensus 162 ~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~----~~a~~~~-gv~PDiv~---~gK~lg 233 (364)
T PRK04013 162 ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK----FLAIEHY-KVEPDIVT---MGKGIG 233 (364)
T ss_pred CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc----hhHHHhc-CCCCCEEE---eccccc
Confidence 3555555544444444 4466789999999999999999999999885442 2232222 33344443 499998
Q ss_pred cccccceEEEEeeC
Q 017967 308 LYAERIGAMNVVCS 321 (363)
Q Consensus 308 l~G~RvG~i~~v~~ 321 (363)
.|+-+|.+ +..
T Consensus 234 -gG~P~~a~--~~~ 244 (364)
T PRK04013 234 -NGVPVSLT--LTN 244 (364)
T ss_pred -CCceeEEE--Eec
Confidence 68889988 554
No 301
>PLN02590 probable tyrosine decarboxylase
Probab=98.72 E-value=2.5e-06 Score=85.43 Aligned_cols=208 Identities=11% Similarity=0.002 Sum_probs=134.7
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCccc-----CCcEEEEeccchhHHHHHHHHHHHHh---
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIERY--- 174 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-----~~~i~~~~t~ggt~al~l~~~l~~~~--- 174 (363)
...+.+.+....... ...|....+..++.+.+.+|+.+..+.+-. ...-++ +.||++|.-++....+..
T Consensus 144 ~~~lgd~l~sa~n~~-~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al~aAR~~~~~ 220 (539)
T PLN02590 144 AGFLGEMLNAGLSVV-GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVVLAARDRILK 220 (539)
T ss_pred HHHHHHHHHHhcccc-cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHHHHHHHHHHh
Confidence 334444444444322 245656677788888898988777665421 012233 799998875542221111
Q ss_pred ------CCCCEEEEcCCCCcchHHHHhhCCC---CeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCC
Q 017967 175 ------FPGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPT 242 (363)
Q Consensus 175 ------~~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPT 242 (363)
.|.-.|++++-++.....++...|+ +++.||+++.+++.+|++.|++++.+. ...+.+++-+-..-.|
T Consensus 221 ~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t 300 (539)
T PLN02590 221 KVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS 300 (539)
T ss_pred hhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence 0222566677788888999999998 588999864456899999999999752 2235566656677788
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe-EEEEEcCccccccccccceEEEEeeC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
|.+ +.+++|.++|+++|+++-+|.+|.++..-. +..+.+...-+. .=+...+.|.+. ..+-.|.+ ++.
T Consensus 301 Gai---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~-----~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~l--lvr 369 (539)
T PLN02590 301 AAV---DPLVPLGNIAKKYGIWLHVDAAYAGNACIC-----PEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPL--WVK 369 (539)
T ss_pred ccc---CCHHHHHHHHHHhCCeEEEecchhhhhhcC-----hhhHHHhcCCccCCEEEECchhhcC-cCcCEEEE--Eec
Confidence 875 677888888999999999999999986432 123333221111 223567899876 56667877 666
Q ss_pred Chh
Q 017967 322 SSD 324 (363)
Q Consensus 322 ~~~ 324 (363)
++.
T Consensus 370 ~~~ 372 (539)
T PLN02590 370 DRY 372 (539)
T ss_pred CHH
Confidence 554
No 302
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.72 E-value=3.3e-07 Score=93.55 Aligned_cols=173 Identities=14% Similarity=0.131 Sum_probs=113.1
Q ss_pred CCcch-HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeE
Q 017967 124 PIEGL-AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS 202 (363)
Q Consensus 124 ~~~G~-~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 202 (363)
...|. .+..+.+|+.+ +. ..-.++ ++|+|+++..+ +...+.+||.|++..-++-.....+...|++++
T Consensus 192 ~~~G~i~eAe~~AA~~f-gA------d~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PV 260 (714)
T PRK15400 192 DHSGPHKEAEEYIARVF-NA------DRSYMV--TNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPI 260 (714)
T ss_pred CCChHHHHHHHHHHHHh-CC------CcEEEE--eCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEE
Confidence 44454 45555666654 43 244444 89999998777 566788999999999999888888999999999
Q ss_pred EEecccCCCC----CCC-----HHHHHHHHHcCCCCc--EEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 203 EYRYYDPKTV----GLD-----FEGMIADIKAAPGGS--FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 203 ~v~~~~~~~~----~~d-----~~~l~~~l~~~~~~~--~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
+++..- +.+ +++ .+.+++.+.+.++.. +.+++.+| +=-|.++..++ |++.|..++ |++||+|
T Consensus 261 Yl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~---I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 261 YFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDF---IKKTLDVKS--IHFDSAW 333 (714)
T ss_pred Eecccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHH---HHHHhCCCC--EEEEccc
Confidence 986421 232 335 899999998766422 24444444 33499987655 555566666 7899998
Q ss_pred CCC-cCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 272 QGF-ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 272 ~~~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
.+. .|.+.-++..++....+.++.++++.|..|.++ |+.-+.+
T Consensus 334 gah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~--alTQaS~ 377 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASM 377 (714)
T ss_pred hhhhccCcccCCcChhhcCCCCCCceEEEEchhhccc--chhHHhH
Confidence 765 333211112222211222356799999999884 6655544
No 303
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.69 E-value=1.2e-06 Score=83.68 Aligned_cols=160 Identities=14% Similarity=0.016 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccc-hhHHHHHHHHHHHHhCCCCEEEEcCCCCcch--HHHHhhCCCCeEEEe
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRLAAALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYR 205 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g-gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~ 205 (363)
.+.|+.+++++... +..+|++ +.| ||+|++.+ +.+++.+||++++..-+..+. ..++++.|+ +..+.
T Consensus 40 ~~~~~~l~~l~~~~-----~~~~v~~--~~gsgT~a~ea~--~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 40 NEAESDLRELLNIP-----DNYEVLF--LQGGATGQFAAV--PLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEe
Confidence 34455555554321 1345666 655 99999999 666677999988887666443 557788898 77666
Q ss_pred cccC--CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 206 YYDP--KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 206 ~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
..+. +...++++.++. + ++..++.+++..|.||+..+ ++++.+++++++|.+ +.+...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~--~---~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDav-ss~g~~~i---- 171 (349)
T TIGR01364 110 SGKEGNYTKIPDPSTWEI--S---EDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMS-SNILSRPI---- 171 (349)
T ss_pred ccccCCCCCCCCHHhcCC--C---CCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEcc-ccccCccC----
Confidence 4311 233456665542 2 24567777888899999765 446668999999999 44443221
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHH
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~ 328 (363)
.+. .-+ +++.|--|.+|.+| +|.+ +.. ++.+++
T Consensus 172 -d~~----~~d--~~~~ssqK~lgP~G--lg~l--~~s-~~~~~~ 204 (349)
T TIGR01364 172 -DVS----KFG--LIYAGAQKNIGPAG--LTVV--IVR-KDLLGR 204 (349)
T ss_pred -CHH----Hcc--EEEEecccccCCCc--eEEE--EEC-HHHHhh
Confidence 121 112 88888899999888 5777 554 554443
No 304
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.68 E-value=1.8e-06 Score=85.26 Aligned_cols=220 Identities=16% Similarity=0.060 Sum_probs=119.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-...-|+ -.+.+.+++.+.+... ....|.......+|.+.+++..-. ..+++.+ +++|++
T Consensus 83 ~ylD~~~g~~~~~lGH--~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~~SGsE 152 (459)
T PRK11522 83 EFIDCLGGFGIFNVGH--RNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPG------KLKYSFF--CNSGTE 152 (459)
T ss_pred EEEECCcCHHhhhcCC--CCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCC------CCCEEEE--eCCchH
Confidence 6788766621111222 2345556655544321 112232333333444444444211 1257777 999999
Q ss_pred HHHHHHHHHHHhCC--C-CEEEEcCCCCcchHHHH-hhCCCCeEE---EecccCCC--CCCCHHHHHHHHHc---CCCCc
Q 017967 163 SLRLAAALIERYFP--G-AKVLISSPTWGNHKNIF-NDARVPWSE---YRYYDPKT--VGLDFEGMIADIKA---APGGS 230 (363)
Q Consensus 163 al~l~~~l~~~~~~--g-d~Vlv~~P~y~~~~~~~-~~~G~~~~~---v~~~~~~~--~~~d~~~l~~~l~~---~~~~~ 230 (363)
|.+.+..+.+.+.. | .+|+...-+|.+..... ...|-.... .|..+.-. .-.|.+.+++.+.. .+++.
T Consensus 153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i 232 (459)
T PRK11522 153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDV 232 (459)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcE
Confidence 99999776655542 3 36888887886664322 222211100 11100000 01267778877753 22334
Q ss_pred EEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 231 FILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
..+++-.-+.-.|.. .+.+-++++.++|+++|+++|.||+..+|.-.+ ..+....+ .-.++++ +|+|.+| .
T Consensus 233 AavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~-gv~PDiv---t~gK~lg-g 304 (459)
T PRK11522 233 AAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG---KMFACEHE-NVQPDIL---CLAKALG-G 304 (459)
T ss_pred EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc---hhhhhhcc-CCCCCEE---Eechhhh-C
Confidence 445544444445664 466788999999999999999999987774222 12222211 2223333 7899998 6
Q ss_pred c-ccceEEEEeeCChh
Q 017967 310 A-ERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G-~RvG~i~~v~~~~~ 324 (363)
| +-+|.+ ++. ++
T Consensus 305 G~~Pigav--~~~-~~ 317 (459)
T PRK11522 305 GVMPIGAT--IAT-EE 317 (459)
T ss_pred CCccceeE--EEc-HH
Confidence 7 588998 665 55
No 305
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.67 E-value=5e-06 Score=82.23 Aligned_cols=225 Identities=14% Similarity=0.126 Sum_probs=123.0
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+++ .++|+..|.-...-|+ -.+.+.+++.+.++... ...|.......+|-+.+++.+- ...+++.+
T Consensus 49 D~dG~-~ylD~~~g~~~~~lGh--~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p------~~~~~v~f- 118 (457)
T PRK05639 49 DVDGN-VFIDFLAGAAAASTGY--SHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISP------IENPKVLF- 118 (457)
T ss_pred eCCCC-EEEECCcCHHhhccCC--CCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCC------CCcCEEEE-
Confidence 33443 7888877642222222 23455555555443211 1123222233345555554421 11257877
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCC--------C-----CeEEEecccCCC--CC----CC
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR--------V-----PWSEYRYYDPKT--VG----LD 215 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G--------~-----~~~~v~~~~~~~--~~----~d 215 (363)
+.+|++|.+.+..+........+|+...-+|.+.... ....| . .+..+|..+... +. -+
T Consensus 119 -~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 197 (457)
T PRK05639 119 -GLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEE 197 (457)
T ss_pred -eCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCC
Confidence 9999999999977655554446788888888665332 11111 1 133344311100 00 02
Q ss_pred H--------HHHHHHHHc---CCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 216 F--------EGMIADIKA---APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 216 ~--------~~l~~~l~~---~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
. +.+++.+.. .++....+++-.-+--.|. ..+.+-+++|.++|+++|+++|.||+..+|.-.+ ..
T Consensus 198 ~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~ 274 (457)
T PRK05639 198 PDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG---KW 274 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc---hH
Confidence 2 234444321 1334555555444555566 4567889999999999999999999998874332 12
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+....+ .-.+++++ |+|.++ .|+-+|.+ ++. ++
T Consensus 275 ~a~~~~-gv~PDiv~---~gK~l~-gG~pi~av--~~~-~~ 307 (457)
T PRK05639 275 FASEWF-EVKPDLII---FGKGVA-SGMGLSGV--IGR-KE 307 (457)
T ss_pred HHHHhc-CCCCCEEE---echhhc-CCCcceeE--Eeh-HH
Confidence 222222 22345444 799998 78888988 654 55
No 306
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.67 E-value=2.8e-06 Score=80.34 Aligned_cols=237 Identities=16% Similarity=0.168 Sum_probs=139.4
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
..+|||..|.-...-|+. .|.+.+++.+..+. .....|. .+.+.++|+.+-...+ ..++|++ +++|
T Consensus 42 ~~YlDf~~Giav~~lGH~--hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff--~NSG 109 (404)
T COG4992 42 REYLDFAAGIAVNNLGHC--HPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFF--CNSG 109 (404)
T ss_pred CEeeeeccceeeeccCCC--CHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---cccEEEE--cCCc
Confidence 379998887643333432 45555555444321 1112232 2334444444433221 1589988 9999
Q ss_pred hHHHHHHHHHHHHhCC--C-CEEEEcCCCCcchHHHHhhCCC-------------CeEEEecccCCCCCCCHHHHHHHHH
Q 017967 161 TGSLRLAAALIERYFP--G-AKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 161 t~al~l~~~l~~~~~~--g-d~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
++|++.+..+.+.+.. + .+|+...-+|.+-....-..+. .+..+|+ -|++.+++++.
T Consensus 110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai~ 182 (404)
T COG4992 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAID 182 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHhc
Confidence 9999999776666553 2 3676666666432211111111 1233333 27899999998
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
+ .+..+++-.-+=-.|+..+. +-++++-++|++||+++|.||+-.++.-.+ ..+....+ .-.++++ .+.
T Consensus 183 ~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG---k~fA~e~~-gV~PDI~---tla 252 (404)
T COG4992 183 E---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG---KLFAYEHY-GVEPDIL---TLA 252 (404)
T ss_pred c---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc---hHHHHHHh-CCCCCEE---Eee
Confidence 4 56666665657777877665 556778899999999999999988886443 23333222 2223433 468
Q ss_pred cccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 304 K~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
|.+| .|+-||.+ ++. +. +.+.+....-...++-++++-.+....|
T Consensus 253 K~Lg-GG~PigA~--la~-~~----~~~~~~~G~HgSTfGGNpLacAv~~a~l 297 (404)
T COG4992 253 KALG-GGFPIGAM--LAT-EE----IASAFTPGDHGSTFGGNPLACAVALAVL 297 (404)
T ss_pred cccc-CCccceee--EEc-hh----hhhcCCCCcccCCCCcCHHHHHHHHHHH
Confidence 9998 89999999 665 43 3333443333344455666555554433
No 307
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.67 E-value=1.1e-06 Score=84.26 Aligned_cols=191 Identities=10% Similarity=-0.058 Sum_probs=116.6
Q ss_pred CCccccHHHHHHHHHHHcc------C--CCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHH
Q 017967 98 LQPYVLDVVKKAENLMLER------G--ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 167 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~------~--~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~ 167 (363)
|+..+++.|++++.+.... + ...++.+ ..-..+.++.+++++... ++.++++ .+.+|+++++.+
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-----~~~~v~~-~~gsgt~~~Ea~ 83 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-----DNYKVLF-LQGGASLQFAMV 83 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCcEEEE-EcCCchHHHHHH
Confidence 5567788999988765411 0 0011211 023355666666665421 1234433 368889999988
Q ss_pred HHHHHHhCCCCEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHH-HHHcCCCCcEEEEEcCCCCCCCC
Q 017967 168 AALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGGSFILLHGCAHNPTGI 244 (363)
Q Consensus 168 ~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~-~l~~~~~~~~~~~i~~p~NPTG~ 244 (363)
+.+++.+||++++..-+..+. .+++++.|.. ..+..... ....+..++++ .+++ +..++.+++..|.||+
T Consensus 84 --~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~-~g~~~~~~~~~~~l~~---~~~~V~~th~eTstGv 156 (360)
T PRK05355 84 --PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSED-DGFTYIPPLDEWQLSD---DAAYVHYTSNETIDGT 156 (360)
T ss_pred --HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccc-cCCCCCCChhhccCCC---CCCEEEEccCCCcceE
Confidence 778888999988887666444 4567788865 55554211 22344444444 5543 3557777888899999
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 245 ~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
..+ ++.+| +|+++|+|.+ +.+...+. .+. .-+ +++.|--|.+|.+|+ |.+ +.. ++
T Consensus 157 ~~~--~i~~i------~g~l~vVDav-ss~g~~~i-----dv~----~~d--~~~~ssqK~lgP~Gl--g~l--~~s-~~ 211 (360)
T PRK05355 157 EFH--ELPDT------GDVPLVADMS-SDILSRPI-----DVS----KFG--LIYAGAQKNIGPAGL--TIV--IVR-ED 211 (360)
T ss_pred ecC--ccccc------CCCcEEEEcC-ccccCccC-----CHH----Hcc--EEEEeccccccCCce--EEE--EEC-HH
Confidence 984 34444 8999999999 44443221 221 112 778888999997774 777 554 55
Q ss_pred HH
Q 017967 325 LA 326 (363)
Q Consensus 325 ~~ 326 (363)
.+
T Consensus 212 ~l 213 (360)
T PRK05355 212 LL 213 (360)
T ss_pred HH
Confidence 33
No 308
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.66 E-value=4.5e-06 Score=80.40 Aligned_cols=238 Identities=11% Similarity=0.055 Sum_probs=145.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
-.|||-. | .+...+.+.+++++.. ++ ..|.......+|.+.+++++ +. +.++. |..|+++
T Consensus 42 V~IDLrS----D-TgT~apS~~m~aAM~~----GD-D~Y~gdpSv~~Lee~vael~-G~-------E~alp--thqGRga 101 (467)
T TIGR02617 42 VFIDLLT----D-SGTGAVTQSMQAAMMR----GD-EAYSGSRSYYALAESVKNIF-GY-------QYTIP--THQGRGA 101 (467)
T ss_pred eEEECcc----C-CCCCCCCHHHHHHHHc----CC-cccccCchHHHHHHHHHHHh-CC-------ceEEE--CCCCchH
Confidence 4677752 2 2222356777777654 22 56888888999999999986 33 45555 8888999
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCC--------CCcchHHHHhhCCCCeEEEecc--------cCCCCCCCHHHHHHHHHcC
Q 017967 164 LRLAAALIERYF-PGAKVLISSP--------TWGNHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 164 l~l~~~l~~~~~-~gd~Vlv~~P--------~y~~~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~ 226 (363)
-.++.. ..+. |||.+.+..+ .|..........|+.++.++.. .+.++.+|++.+++.+++.
T Consensus 102 E~Il~~--~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~ 179 (467)
T TIGR02617 102 EQIYIP--VLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_pred HHHHHH--hhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhc
Confidence 878743 3355 6777765443 2333345667889888776432 2235789999999999852
Q ss_pred C-CC---cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC----CC------cCCCCCCchhHHHHH---
Q 017967 227 P-GG---SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ----GF------ASGSLDNDASSVRLF--- 289 (363)
Q Consensus 227 ~-~~---~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~----~~------~~~~~~~~~~~~~~~--- 289 (363)
. ++ ...=+.||- =-|..+|.+.++++.++|++||+.++.|.+=. -| .+. ..++..+
T Consensus 180 g~~~i~~v~~tlt~N~--~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~-----~~si~eI~rE 252 (467)
T TIGR02617 180 GPNNVPYIVATITCNS--AGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYK-----NWSIEQITRE 252 (467)
T ss_pred CCCCceeeeeeEEEec--CCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhc-----CCCHHHHHHH
Confidence 1 11 111222222 24889999999999999999999999998621 11 121 1233333
Q ss_pred -HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhh-----hccccCCCchHHHHHHhcccc
Q 017967 290 -ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL-----ARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 290 -~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~-----~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.+.. ..+.-|+||.+|.| +|-+. ++.+++..+ +.++++.. .-.++.+.+.--..+++..|.
T Consensus 253 ~~~~a--Dsvt~slsKglgAp---vGg~L-ag~d~~~~~-l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~ 319 (467)
T TIGR02617 253 TYKYA--DMLAMSAKKDAMVP---MGGLL-CFKDDSFFD-VYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY 319 (467)
T ss_pred hhccC--CEEEEEcCCCCCCc---ccceE-EecchhHHH-HHHHHHhhcccccCCcCcCchhHHHHHHHHhhhh
Confidence 2322 25577999999876 56552 344442111 22333222 134455677766777665544
No 309
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.66 E-value=4.1e-06 Score=83.84 Aligned_cols=192 Identities=11% Similarity=0.021 Sum_probs=120.6
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCC-Cc--------ccCCcEEEEeccchhHHHHHHHHHHHHh--C-------------
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADN-SV--------LKEQRVATVQGLSGTGSLRLAAALIERY--F------------- 175 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~-~~--------~~~~~i~~~~t~ggt~al~l~~~l~~~~--~------------- 175 (363)
..+.......++.+.+.+|+.+..+ .+ -.++.-..+.|.|||.|.-.+....+.. .
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 3344455566777777777644321 10 0111121223899999976653222211 0
Q ss_pred ---------CCCEEEEcCCCCcchHHHHhhCCC---CeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEEEcCCCC
Q 017967 176 ---------PGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHN 240 (363)
Q Consensus 176 ---------~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~i~~p~N 240 (363)
++..|++++-.+......++..|+ +++.+|++ +++.+|++.|++.+++ ...+.++++.+..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 134688888888888888888888 78999984 4679999999998863 222344455456677
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC-CeEEEEEcCccccccccccceEEEEe
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG-MELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
.||.+-+. ++|+++|+++|+++.+|.+|.+...-. ...+..+..- .-..+..+..|.++. -.-+|.+ +
T Consensus 277 ~tGaiDpl---~eIa~i~~~~g~~lHVDaA~gg~~~~~-----~~~r~~l~gle~aDSit~d~HK~l~~-P~g~G~l--l 345 (522)
T TIGR03799 277 ETGNIDPL---DEMADIAQELGCHFHVDAAWGGATLLS-----NTYRHLLKGIERADSVTIDAHKQLYV-PMGAGMV--L 345 (522)
T ss_pred CCCCcCCH---HHHHHHHHHcCCeEEEEchhhhHHHhC-----HHHHHHhcCchhCCEEEEChhhcCCc-CcccEEE--E
Confidence 99998765 556677999999999999988654321 1122222221 234567888996542 3447888 6
Q ss_pred eCChh
Q 017967 320 CSSSD 324 (363)
Q Consensus 320 ~~~~~ 324 (363)
..++.
T Consensus 346 vr~~~ 350 (522)
T TIGR03799 346 FKDPA 350 (522)
T ss_pred EeCHH
Confidence 66665
No 310
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.66 E-value=1.2e-06 Score=84.22 Aligned_cols=208 Identities=13% Similarity=0.057 Sum_probs=126.6
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC---CcEEEEeccchhHHHHHHHHHHHHh-----
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE---QRVATVQGLSGTGSLRLAAALIERY----- 174 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~---~~i~~~~t~ggt~al~l~~~l~~~~----- 174 (363)
...+.+.+...++... ..|.......++.+.+.+++.+..+.+-+. ..-..+.|.|||+++..+....+..
T Consensus 53 ~~i~~~~l~~~~n~n~-~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~ 131 (373)
T PF00282_consen 53 ASILADLLASALNQNG-FTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRS 131 (373)
T ss_dssp HHHHHHHHHHHHT-BT-TSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccc-cccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhh
Confidence 3445555555554432 445555667788888888887766654111 0112223899999987653221111
Q ss_pred -CCC-----C-EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcEEEEEcCCCCCCCC
Q 017967 175 -FPG-----A-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAHNPTGI 244 (363)
Q Consensus 175 -~~g-----d-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~i~~p~NPTG~ 244 (363)
..| + .|++++-++......+...|+.++.||+++ ++.+|++.|++.+.+.. ..+.+++.+.+...||.
T Consensus 132 ~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga 209 (373)
T PF00282_consen 132 KAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGA 209 (373)
T ss_dssp HHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSB
T ss_pred hhcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCccccc
Confidence 012 2 466666678888999999999999999953 67899999999886521 22445555567778887
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE-EEEEcCccccccccccceEEEEeeCCh
Q 017967 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL-LVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 245 ~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v-i~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
+ +++++|+++|+++++++-+|.+|.+...-..+ ... +...-+++ =+..++.|.++ .-+..|++ ...++
T Consensus 210 ~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~--~~~---~~~gi~~adSit~d~HK~l~-~P~~~~~~--l~r~~ 278 (373)
T PF00282_consen 210 I---DPLEEIADICEKYNIWLHVDAAYGGSALLSPE--YRH---LLFGIERADSITIDPHKWLG-VPYGCGVL--LVRDK 278 (373)
T ss_dssp B----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT--TGG---GGTTGGGESEEEEETTTTTS--SSS-EEE--EESSG
T ss_pred c---cCHHHHhhhccccceeeeeccccccccccccc--ccc---cccccccccccccchhhhhc-CCccceeE--Eeecc
Confidence 6 77888999999999999999999984321111 111 11111111 22457899887 45678888 77776
Q ss_pred h
Q 017967 324 D 324 (363)
Q Consensus 324 ~ 324 (363)
.
T Consensus 279 ~ 279 (373)
T PF00282_consen 279 S 279 (373)
T ss_dssp G
T ss_pred c
Confidence 6
No 311
>PLN02880 tyrosine decarboxylase
Probab=98.64 E-value=5.4e-06 Score=82.61 Aligned_cols=192 Identities=9% Similarity=-0.020 Sum_probs=125.8
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCccc-----CCcEEEEeccchhHHHHHHHHHHHH--hC-------CCCEEEEcCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIER--YF-------PGAKVLISSP 185 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-----~~~i~~~~t~ggt~al~l~~~l~~~--~~-------~gd~Vlv~~P 185 (363)
..|....+..++.+.+.+|+....+.+-. ...-++ |.|||.|..++....+. +. +.-.|++++-
T Consensus 112 ~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~ 189 (490)
T PLN02880 112 FSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ 189 (490)
T ss_pred cccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC
Confidence 33444556677888888887766554311 012334 78999987665322211 10 1124667777
Q ss_pred CCcchHHHHhhCCCC---eEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Q 017967 186 TWGNHKNIFNDARVP---WSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (363)
Q Consensus 186 ~y~~~~~~~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~ 259 (363)
++.....++...|+. ++.||+++..++.+|++.|++.+.+. ...+.+++-+-+.-.||.+-+ +++|.++|+
T Consensus 190 aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~ 266 (490)
T PLN02880 190 THSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAK 266 (490)
T ss_pred chHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHH
Confidence 888899999999984 78899864446789999999998742 233566666667888998765 556677799
Q ss_pred hcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 260 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
++|+++.+|.+|.++..-. +..+..+.. ..-.-+..++.|.++ .-.-.|.+ ...+.+
T Consensus 267 ~~~iwlHVDaA~gg~~~~~-----~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~l--lvr~~~ 324 (490)
T PLN02880 267 SNGMWFHVDAAYAGSACIC-----PEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLL--WVKDRN 324 (490)
T ss_pred HcCCEEEEehhhHHHHHhC-----HHHHHHhcCchhcCEEEECchhhcC-CCccEEEE--EEeCHH
Confidence 9999999999998875431 122222221 112356788899885 66777888 555443
No 312
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.64 E-value=6.6e-06 Score=81.61 Aligned_cols=203 Identities=14% Similarity=0.085 Sum_probs=110.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC------CCCcchHHHHHH----HHHHHhcCCCCcccCCcE-
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNKV----TAELLFGADNSVLKEQRV- 152 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~G~~~lr~a----ia~~l~~~~~~~~~~~~i- 152 (363)
+.|+|-..++ ++.+.+.++....+......+| +...-..++.+. ..+.+... +..+
T Consensus 35 ~~l~liasen-------~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~------~~~~~ 101 (475)
T PLN03226 35 KGLELIASEN-------FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD------PEKWG 101 (475)
T ss_pred cCeeEecCCc-------cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC------cceeE
Confidence 6788876664 3466788777666522111222 222223333321 22222221 2233
Q ss_pred EEEeccchhHHHHHHHHHHHHhCCCCEEEEcCC---CCcchHHHHh-----hCCCCeE--EEecccCCCCCCCHHHHHHH
Q 017967 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSP---TWGNHKNIFN-----DARVPWS--EYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 153 ~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P---~y~~~~~~~~-----~~G~~~~--~v~~~~~~~~~~d~~~l~~~ 222 (363)
+-++..+|+.|...+ +.+++.|||+|+..+. ++..+..... ..+..+. ++..+ .+++.+|++.+++.
T Consensus 102 ~nv~~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~-~~~g~iD~d~Le~~ 178 (475)
T PLN03226 102 VNVQPLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLD-ESTGLIDYDKLEKK 178 (475)
T ss_pred EecCcCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeec-CCCCCcCHHHHHHH
Confidence 334567888886666 6777889999998553 3333222221 1111111 33333 34678999999999
Q ss_pred HHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC-CcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
+.+. +++++++ ..++ +|...+. ++|.++|+++|.++++|++..- +...+..+ .+ .+ .-.+++.|
T Consensus 179 l~~~--~pklIv~-~~S~-~s~~~D~---a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--~p----~~--~~Div~~t 243 (475)
T PLN03226 179 AMLF--RPKLIIA-GASA-YPRDWDY---ARMRKIADKVGALLMCDMAHISGLVAAQEAA--SP----FE--YCDVVTTT 243 (475)
T ss_pred Hhhc--CCeEEEE-ecCc-CCCccCH---HHHHHHHHHcCCEEEEEchhhhCcccCCCCC--CC----CC--CCeEEEec
Confidence 8742 2444443 3333 5665554 4666779999999999998432 22111100 01 11 23377899
Q ss_pred CccccccccccceEEEEeeC
Q 017967 302 YSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~ 321 (363)
++|.++ |-+-|++ .+.
T Consensus 244 ~hK~L~--GP~Gg~I--~~~ 259 (475)
T PLN03226 244 THKSLR--GPRGGMI--FFR 259 (475)
T ss_pred Cccccc--CCCceEE--EEc
Confidence 999983 3343777 554
No 313
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.63 E-value=4.1e-07 Score=87.93 Aligned_cols=185 Identities=15% Similarity=0.030 Sum_probs=110.6
Q ss_pred ccccHH-HHHHHHHHHccCCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc-chhHHHHHHHHHHHHhC
Q 017967 100 PYVLDV-VKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL-SGTGSLRLAAALIERYF 175 (363)
Q Consensus 100 ~~~~~~-v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~-ggt~al~l~~~l~~~~~ 175 (363)
..+++. |.+++....... .++.+ ..-..+.|+.+++++... ++++|++ +. +||++++.+ +..++.
T Consensus 21 ~~~~~~~v~~a~~~~~~~~--~hr~~~f~~~~~~~r~~l~~l~~~~-----~~~~v~~--~~gs~T~~~~~~--~~~l~~ 89 (378)
T PRK03080 21 CKKRPGWQLEALADALLGR--SHRQKPVKALLKRVIEGTRELLSLP-----EGYEVGI--VPGSDTGAWEMA--LWSLLG 89 (378)
T ss_pred cCCChHHHHHHHHhhhccc--CcCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEE--ECCchHHHHHHH--HHhcCC
Confidence 444555 777776543211 11111 233467778888876432 1356766 64 899999998 444455
Q ss_pred C-CCEEEEcCCCCcc-hHH-HHhhCCC-CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHH
Q 017967 176 P-GAKVLISSPTWGN-HKN-IFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQW 251 (363)
Q Consensus 176 ~-gd~Vlv~~P~y~~-~~~-~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~ 251 (363)
+ ++.|++ .-.|+. +.. +.++.|+ +++.++.+ ++..+|+++++. ++++.+++.+|.||..++.+++
T Consensus 90 ~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~--------~~~V~~~h~~t~tG~~~pi~~I 158 (378)
T PRK03080 90 ARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF--------DRDVVFTWNGTTTGVRVPVARW 158 (378)
T ss_pred CCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC--------CCCEEEEecCCccceeccchhh
Confidence 4 344444 333433 222 2357899 88888763 445667666331 2245668889999999986655
Q ss_pred HHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEEEeeCChhHHHH
Q 017967 252 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAAR 328 (363)
Q Consensus 252 ~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~~v~~~~~~~~~ 328 (363)
++ +++|+++|+|.+ +.+...+. .+.. -.+++.|.-|.++. +| +|++ +.. ++.+++
T Consensus 159 ---~~--~~~g~~~vVDa~-qs~G~~pi-----dv~~------iD~~~~s~~K~l~~P~G--~g~l--~v~-~~~~~~ 214 (378)
T PRK03080 159 ---IG--ADREGLTICDAT-SAAFALPL-----DWSK------LDVYTFSWQKVLGGEGG--HGMA--ILS-PRAVER 214 (378)
T ss_pred ---cc--ccCCCeEEEecc-cccccCCC-----CHHH------CcEEEEehhhhCCCCCc--eEEE--EEC-HHHHHh
Confidence 44 678999999988 55543321 1211 14778888998864 56 5777 554 554443
No 314
>PLN02271 serine hydroxymethyltransferase
Probab=98.63 E-value=6.8e-06 Score=81.44 Aligned_cols=205 Identities=16% Similarity=0.145 Sum_probs=121.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC------CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
..|+|=..++ ++.+.+.+++...+......+|+ ....+.++.....+.....++.....+.+- +|.
T Consensus 149 ~~l~LIASEN-------~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaN-VQp 220 (586)
T PLN02271 149 KGIELIASEN-------FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVN-VQP 220 (586)
T ss_pred cCeeeccccc-------cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccc-eee
Confidence 6788876553 34677887765554322222232 222233333222222222222222122111 345
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH---------hhCCCCeEEEe--cccCCCCCCCHHHHHHHHHcC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---------NDARVPWSEYR--YYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---------~~~G~~~~~v~--~~~~~~~~~d~~~l~~~l~~~ 226 (363)
.+|+.|...+ +..++.|||+|+..+..+.++.... ...|+.+..++ ++ ++++.+|.+++++....
T Consensus 221 ~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d-~~~g~IDyd~lek~a~~- 296 (586)
T PLN02271 221 YSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVN-PQTGYIDYDKLEEKALD- 296 (586)
T ss_pred ccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccc-cccCccCHHHHHHHhhh-
Confidence 6888887777 6677889999999999888775532 34565555555 43 35678999999985443
Q ss_pred CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
.+++++++..-.|| ..++ +++|.++|+++|+++++|.+.. ++...+..+. ++ . .-.++..|..|.
T Consensus 297 -~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~s--P~----~--~aDvvt~TTHKt 362 (586)
T PLN02271 297 -FRPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVN--PF----D--YCDIVTSTTHKS 362 (586)
T ss_pred -cCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCC--CC----c--CCcEEEeCCccc
Confidence 45678877777788 4444 4455666899999999999953 3332221110 11 1 134788999998
Q ss_pred cccccccceEE
Q 017967 306 LGLYAERIGAM 316 (363)
Q Consensus 306 ~~l~G~RvG~i 316 (363)
+. |=|-|.+
T Consensus 363 Lr--GPrGG~I 371 (586)
T PLN02271 363 LR--GPRGGII 371 (586)
T ss_pred CC--CCCceEE
Confidence 84 6676888
No 315
>PRK07482 hypothetical protein; Provisional
Probab=98.63 E-value=9.2e-06 Score=80.48 Aligned_cols=227 Identities=14% Similarity=0.090 Sum_probs=122.8
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
+.+++ .+||+..|.-...-|+ -.+.+.+++.+.++... ...+ . .-..+.+..+|+.+...... .-+++.+
T Consensus 46 D~dG~-~ylD~~sg~~~~~lGh--~~p~v~~Av~~q~~~~~~~~~~-~-~~~~~~~~~lAe~L~~~~p~--~~~~v~f-- 116 (461)
T PRK07482 46 DAQGR-RYIDAFAGLYCVNVGY--GRTEVAEAIAEQAKELAYYHTY-V-GHGTEASITLSKRIIDRAPA--GMSKVYY-- 116 (461)
T ss_pred ECCCC-EEEEcccchhhhcCCC--CCHHHHHHHHHHHHhcCccccc-c-ccCCHHHHHHHHHHHHhCCC--CcCEEEE--
Confidence 34443 7888887753222232 24556666655553311 0111 0 01123334444444332111 1367877
Q ss_pred ccchhHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHHHh-h---------CC---CCeEEEecccCCC---CC-
Q 017967 157 GLSGTGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKNIFN-D---------AR---VPWSEYRYYDPKT---VG- 213 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~~~-~---------~G---~~~~~v~~~~~~~---~~- 213 (363)
+.+|++|.+.+..+...+ . +| .+|+...-+|.+...... . .+ -.+..++...... .+
T Consensus 117 ~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 196 (461)
T PRK07482 117 GLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGM 196 (461)
T ss_pred eCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCC
Confidence 999999999997665443 1 22 568888888866432111 1 11 0122222100000 00
Q ss_pred -------CCHHHHHHHHHc-CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchh
Q 017967 214 -------LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (363)
Q Consensus 214 -------~d~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 284 (363)
-+++.+++.+.. .++....+++-.-+.-.|.. .+.+-+++|.++|++||+++|.||+..+|.-.+ ..+
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~ 273 (461)
T PRK07482 197 SEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG---SMF 273 (461)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---chh
Confidence 135777777743 22334455544444445666 567899999999999999999999999994322 122
Q ss_pred HHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 285 SVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 285 ~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
....+ +-.+++++ |+|.++ .|+ -+|.+ ++. ++
T Consensus 274 a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av--~~~-~~ 306 (461)
T PRK07482 274 GSDHY-GIEPDLIT---VAKGLT-SAYAPLSGS--IVG-EK 306 (461)
T ss_pred hHHhc-CCCCCEEE---Eccccc-cCcccccee--eec-HH
Confidence 22222 33345554 489997 675 78887 554 55
No 316
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.62 E-value=4.9e-06 Score=80.70 Aligned_cols=254 Identities=15% Similarity=0.129 Sum_probs=143.5
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+++ .+|||..|.....-|+ -.|.|.+++.+.++.- ....|......-++-+.+.+.+-.. ....+++
T Consensus 52 DvdG~-~ylDf~sgi~v~~~GH--~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f- 122 (447)
T COG0160 52 DVDGN-EYLDFLSGIAVLNLGH--NHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF- 122 (447)
T ss_pred eCCCC-EEEEcccCcchhccCC--CCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe-
Confidence 34444 7889888654333333 2456666665544321 1133333233334444444443221 2466777
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-Hh--------h-----CCCCeEEEecccCC--CCCC-----
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FN--------D-----ARVPWSEYRYYDPK--TVGL----- 214 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~--------~-----~G~~~~~v~~~~~~--~~~~----- 214 (363)
+++|++|.+.+..+.........|+...-+|.+.... +. . ..-.+..+|+.+.- .++.
T Consensus 123 -~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~ 201 (447)
T COG0160 123 -GNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEEC 201 (447)
T ss_pred -cCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhh
Confidence 9999999999977766555557788888777554322 11 1 11125555542211 1111
Q ss_pred ---CHHHHHHHHHc---CCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHH
Q 017967 215 ---DFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (363)
Q Consensus 215 ---d~~~l~~~l~~---~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (363)
..+.++..+.. .+.....+++=.-+.-.|...++ +-++++.++|++||+++|+||+-.+|.-.+ ..+.+.
T Consensus 202 ~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG---~~fa~E 278 (447)
T COG0160 202 GDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG---KMFAFE 278 (447)
T ss_pred hHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---cchhhh
Confidence 23334443332 33445666666667777876655 556789999999999999999998887653 344544
Q ss_pred HHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 288 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 288 ~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.+ .--++++ .|||.+| .|+-+|.+ +.. ++ +.+ ...-.-...++-++++..++...|+
T Consensus 279 ~~-gv~PDiv---t~aK~ig-~G~Pl~av--v~r-~e----i~~-~~~g~~~~Tf~GNpva~Aaa~AvL~ 335 (447)
T COG0160 279 HF-GVEPDIV---TLAKSLG-GGLPLSAV--VGR-AE----IMD-WPPGGHGGTFGGNPVACAAALAVLD 335 (447)
T ss_pred hc-CCCCCEE---Eeccccc-CCCceeEE--ecc-HH----hcc-cCCcccCCCCCcCHHHHHHHHHHHH
Confidence 33 2123444 5799999 59999999 654 55 444 2222222234555555555544443
No 317
>PRK06062 hypothetical protein; Provisional
Probab=98.60 E-value=9e-06 Score=80.32 Aligned_cols=224 Identities=13% Similarity=0.052 Sum_probs=120.2
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+++ .+||+..|.-...-|+ -.|.+.+++.+.+.... ...| ......+|-+.+++..-. .-+++.+
T Consensus 49 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~~lae~L~~~~p~------~~~~v~f- 117 (451)
T PRK06062 49 DYEGR-RYLDFSSQLVNTNIGH--QHPKVVAAIQEQAARLCTVAPAH-ANDARSEAARLIAERAPG------DLSKVFF- 117 (451)
T ss_pred ECCCC-EEEEcccCHHhhcCCC--CCHHHHHHHHHHHHhcCCcCCcc-CCHHHHHHHHHHHHhCCC------CCCEEEE-
Confidence 33443 7888876642111222 23445555544443211 0112 222233444444443211 1258877
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCC-----------CeEEEecccCCC--CC--CC----
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV-----------PWSEYRYYDPKT--VG--LD---- 215 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~-----------~~~~v~~~~~~~--~~--~d---- 215 (363)
+.+|++|.+.+..+.+.+....+|+...-+|.+...... ..|. .+..++...... ++ -|
T Consensus 118 -~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 196 (451)
T PRK06062 118 -TNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEEC 196 (451)
T ss_pred -cCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHH
Confidence 999999999997665544333678888877866643221 1111 112222100000 10 12
Q ss_pred ---HHHHHHHHHcC-CCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH
Q 017967 216 ---FEGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (363)
Q Consensus 216 ---~~~l~~~l~~~-~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (363)
++.+++.+... +++...+++-.-+.--|.. .+.+-+++|.++|+++|+++|.||+..+|.-.+ ..+....+
T Consensus 197 ~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~~~~- 272 (451)
T PRK06062 197 ERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG---KWFAIEHF- 272 (451)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc---HHHHHHhc-
Confidence 56777777542 2333444443333334555 467889999999999999999999998874321 12222222
Q ss_pred hcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 291 TRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 291 ~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
.-.+++ -.|+|.+| .|+ -+|.+ ++. ++
T Consensus 273 gv~PDi---~t~gK~lg-gG~~Pigav--~~~-~~ 300 (451)
T PRK06062 273 GVVPDL---ITFAKGVN-SGYVPLGGV--AIS-EA 300 (451)
T ss_pred CCCCCe---eeechhhh-cCCcCcEEE--EEc-HH
Confidence 222343 36799998 674 78888 665 55
No 318
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.59 E-value=4.6e-06 Score=85.31 Aligned_cols=191 Identities=13% Similarity=0.048 Sum_probs=119.2
Q ss_pred CCcch-HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeE
Q 017967 124 PIEGL-AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS 202 (363)
Q Consensus 124 ~~~G~-~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 202 (363)
...|. .+..+.+|+.+ +. ..-.++ ++|+|+++..+ +...+.+||.|++..-++-.....+...|++++
T Consensus 192 ~~~G~i~eAe~~aA~~f-gA------d~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PV 260 (713)
T PRK15399 192 DHTGPHLEAEEYIARTF-GA------EQSYIV--TNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPI 260 (713)
T ss_pred CCChHHHHHHHHHHHHh-CC------CcEEEE--eCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeE
Confidence 34454 45555666664 33 244444 89999998777 667788999999999999888888999999999
Q ss_pred EEecccCCC----CCCCH-----HHHHHHHHcCCCC--cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE-EEecC
Q 017967 203 EYRYYDPKT----VGLDF-----EGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVA 270 (363)
Q Consensus 203 ~v~~~~~~~----~~~d~-----~~l~~~l~~~~~~--~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i-i~De~ 270 (363)
+++..- +. .+++. +.+++++.+.++. ++.+++.+| +=-|.++..+++.++ | |+.+ ++||+
T Consensus 261 Yl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~---~---g~~~ilvDEA 332 (713)
T PRK15399 261 WLKPTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQT---L---DVPSIHFDSA 332 (713)
T ss_pred Eecccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHH---h---CCCEEEEecc
Confidence 985321 22 34455 8899999876532 245555555 345999987665554 4 5555 69999
Q ss_pred CCCCc-CCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhh
Q 017967 271 YQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 336 (363)
Q Consensus 271 y~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~ 336 (363)
|.+.. |.+.-++..++......+.-++++.|..|.+ +|+.-+.++-+-. .-.-+++.+.+...
T Consensus 333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~-~vd~~~~n~a~~m~ 396 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKG-EYDEETFNEAFMMH 396 (713)
T ss_pred chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecC-CCCHHHHHHHHHHH
Confidence 87653 3321111222211001234456789999988 4776666543322 22234455555443
No 319
>PRK12403 putative aminotransferase; Provisional
Probab=98.58 E-value=9.5e-06 Score=80.35 Aligned_cols=225 Identities=14% Similarity=0.077 Sum_probs=116.1
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
..+++ .+||+..|.-...-|+ -.|.+.+++.+.++.-. ...+ .......+|-+.+++++.. .-+++.+
T Consensus 50 D~dG~-~ylD~~~g~~~~~lGh--~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f 120 (460)
T PRK12403 50 DNDGK-RYLDGMSGLWCTNLGY--GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPG------HYSHAIY 120 (460)
T ss_pred eCCCC-EEEECchhHHhhcCCC--CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCC------CcCEEEE
Confidence 33443 7888776642222233 23455555555543311 0011 1122233455555554311 1257877
Q ss_pred EeccchhHHHHHHHHHHHHh-----CCCCE-EEEcCCCCcchHH-HHhhCCCC-----------eEEEecccC--CCCCC
Q 017967 155 VQGLSGTGSLRLAAALIERY-----FPGAK-VLISSPTWGNHKN-IFNDARVP-----------WSEYRYYDP--KTVGL 214 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~-----~~gd~-Vlv~~P~y~~~~~-~~~~~G~~-----------~~~v~~~~~--~~~~~ 214 (363)
+.+|++|.+.+..+...+ .+++. |+...-+|.+... .+...|.+ +..+|.... ..+..
T Consensus 121 --~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 198 (460)
T PRK12403 121 --TNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGEL 198 (460)
T ss_pred --eCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCC
Confidence 999999999987766544 13333 4444556655422 22222211 222321000 00011
Q ss_pred --------CHHHHHHHHHc-CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchh
Q 017967 215 --------DFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (363)
Q Consensus 215 --------d~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 284 (363)
+.+.+++.+.+ .++....+++-.-+.--|.. .+.+-+++|.++|++||+++|.||+..+|.-.+ ..+
T Consensus 199 ~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~ 275 (460)
T PRK12403 199 TPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG---EWF 275 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhh
Confidence 12456555532 22333344443334444654 467789999999999999999999998874322 122
Q ss_pred HHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 285 SVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 285 ~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
....+ .-.+++++ |+|.+| .|+ -+|.+ ++. ++
T Consensus 276 a~e~~-gv~PDiv~---~gK~lg-gG~~Piga~--v~~-~~ 308 (460)
T PRK12403 276 AHEHF-GFEPDTLS---IAKGLT-SGYVPMGGL--VLS-KR 308 (460)
T ss_pred hhhhc-CCCCCeEE---Eccccc-ccccceEEE--EEC-HH
Confidence 22222 22244443 899998 684 78888 665 55
No 320
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.57 E-value=1.9e-05 Score=78.24 Aligned_cols=218 Identities=14% Similarity=0.092 Sum_probs=118.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.+||+. |.....-|+ -.|.|.+++.+.++.- ....+.......+|.+.+++++-. ..+++.+ +.+|++
T Consensus 73 ~ylD~~-g~~~~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~~sGse 141 (459)
T PRK06082 73 KYMDFH-GNNVHQLGY--GHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGG------ELNRVLF--APGGTS 141 (459)
T ss_pred EEEEcc-cHhhcccCC--CCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCC------CCCEEEE--CCCcHH
Confidence 688876 321111222 2345666655554321 101111223334455555544211 1257877 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhCCC------------CeEEEecccCCC--CC-C------CHHHHH
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKT--VG-L------DFEGMI 220 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~~--~~-~------d~~~l~ 220 (363)
|.+.+..+...+....+|+...-+|.+... .+...|. .+..+|...... +. . +++.++
T Consensus 142 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (459)
T PRK06082 142 AIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLE 221 (459)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHH
Confidence 999997665555434788888888866532 2221111 122232100000 10 0 135577
Q ss_pred HHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 221 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 221 ~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
+.+... .....+++-..++-.+...+.+-+++|.++|+++|+++|.||+..+|.-.+ ..+....+ .-.+++++
T Consensus 222 ~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~fa~e~~-gv~PDiv~-- 294 (459)
T PRK06082 222 YVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG---EWFTHQAY-GIEPDILC-- 294 (459)
T ss_pred HHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHhHhh-CCCCCEEE--
Confidence 777642 234444443334444556778889999999999999999999988874322 12222222 22344443
Q ss_pred cCcccccccc-ccceEEEEeeCChh
Q 017967 301 SYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 301 S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
|+|.+| .| +-+|.+ ++. ++
T Consensus 295 -~gKgl~-gG~~P~~av--~~~-~~ 314 (459)
T PRK06082 295 -IGKGLG-GGLVPIAAM--ITK-DK 314 (459)
T ss_pred -eccccc-CCCCcceEE--EEc-HH
Confidence 899998 67 478888 554 44
No 321
>PRK05965 hypothetical protein; Provisional
Probab=98.57 E-value=1.7e-05 Score=78.52 Aligned_cols=224 Identities=14% Similarity=0.101 Sum_probs=123.0
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CC---CCCCCcchHHHHHHHHHHHhcCCCCcccCCcEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~---~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (363)
+.+++ .+||+..|.....-|+- .+.+.+++.+.++... .. .| ......+|-+.+++.+ .. .-+++.
T Consensus 42 D~dG~-~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~-~~~~~~~lae~L~~~~----p~--~~~~v~ 111 (459)
T PRK05965 42 DASGH-QLLDAFAGLWCVNVGYG--QESIVEAAAEQMRELPYATGYFHF-GSEPAIRLAAKLAERA----PG--SLNHVY 111 (459)
T ss_pred ECCCC-EEEECcccHHhccCCCC--CHHHHHHHHHHHHhcCCccccccc-CCHHHHHHHHHHHhhC----CC--CcCEEE
Confidence 34443 78888766432222222 3455555555543211 01 11 1122223444444432 11 135787
Q ss_pred EEeccchhHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHHH-hh---------CCC---CeEEEecccC--CCC
Q 017967 154 TVQGLSGTGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKNIF-ND---------ARV---PWSEYRYYDP--KTV 212 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~~-~~---------~G~---~~~~v~~~~~--~~~ 212 (363)
+ +.+|++|.+.+..+.+.+ . ++ .+|+...-+|.+..... .. .|. .+..++.... ..+
T Consensus 112 f--~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (459)
T PRK05965 112 F--TLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPV 189 (459)
T ss_pred E--eCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCccccccc
Confidence 7 999999999997765554 1 33 57888888887664211 11 111 1122221100 001
Q ss_pred CCC--------HHHHHHHHHcCC-CCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 213 GLD--------FEGMIADIKAAP-GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 213 ~~d--------~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
+-| ++.+++.+.... +....+++-.-+.-.|.. .+.+-+++|.++|++||+++|.||+..+|.-.+ .
T Consensus 190 ~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG---~ 266 (459)
T PRK05965 190 GDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG---P 266 (459)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc---h
Confidence 123 256777776432 344455544445555664 577888999999999999999999999984332 1
Q ss_pred hhHHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
.+....+ .-.+++++ |+|.++ .|+ -+|.+ ++. ++
T Consensus 267 ~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av--~~~-~~ 301 (459)
T PRK05965 267 LFACEAE-GVVPDLMT---VAKGLT-SGYVPMGAV--LMS-DH 301 (459)
T ss_pred hhhHhhc-CCCCCeEE---echhhc-cCCcceeEE--EEc-HH
Confidence 2222222 22344444 489998 784 89999 665 55
No 322
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.56 E-value=4.8e-06 Score=81.66 Aligned_cols=221 Identities=10% Similarity=0.011 Sum_probs=117.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcc-hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEG-LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G-~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-...-|+ -.+.+.+++.+.++... |....+ ..+.+..+|+.+...... .-+++.+ +.+|++
T Consensus 44 ~ylD~~~g~~~~~lGh--~~p~i~~Ai~~q~~~~~---~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~SGsE 114 (428)
T PRK07986 44 RLVDGMSSWWAAIHGY--NHPQLNAAMKSQIDAMS---HVMFGGITHPPAIELCRKLVAMTPQ--PLECVFL--ADSGSV 114 (428)
T ss_pred EEEEcchhHHhhcCCC--CCHHHHHHHHHHHhhcC---CccccccCCHHHHHHHHHHHhhCCC--CcCEEEE--eCCcHH
Confidence 7888877642111222 23556666655543311 111100 112334444444332211 1257877 999999
Q ss_pred HHHHHHHHHHHh-----CCCCEEEEcCCCCcchHHH-HhhCCC-------------CeEEEecccCC---CC-CCCHHHH
Q 017967 163 SLRLAAALIERY-----FPGAKVLISSPTWGNHKNI-FNDARV-------------PWSEYRYYDPK---TV-GLDFEGM 219 (363)
Q Consensus 163 al~l~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~-~~~~G~-------------~~~~v~~~~~~---~~-~~d~~~l 219 (363)
|.+.+..+...+ ....+|+...-+|.+.... +...|- .+..++..... .+ .-|++.+
T Consensus 115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l 194 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF 194 (428)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHH
Confidence 999987765554 1236788888888664321 111110 11222210000 01 1256778
Q ss_pred HHHHHcCCCCcEEEEEcC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEE
Q 017967 220 IADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (363)
Q Consensus 220 ~~~l~~~~~~~~~~~i~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 297 (363)
++.+...+++...+++-. .+.-.|. ..+++-+++|.++|+++|+++|+||+..+|...+ ..+....+ .-.++++
T Consensus 195 ~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG---~~fa~~~~-gv~PDi~ 270 (428)
T PRK07986 195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG---KLFACEHA-GIAPDIL 270 (428)
T ss_pred HHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---Ceeeeccc-CCCCCEE
Confidence 887865444444444322 1344454 4467889999999999999999999987773221 11111111 2223444
Q ss_pred EEEcCcccccccc-ccceEEEEeeCChh
Q 017967 298 VAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 298 ~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
.|+|.++ .| +-+|.+ ++. ++
T Consensus 271 ---t~gK~l~-gG~~p~~av--~~~-~~ 291 (428)
T PRK07986 271 ---CLGKALT-GGTMTLSAT--LTT-RE 291 (428)
T ss_pred ---Eechhhh-CCcccCcch--hch-HH
Confidence 4899997 67 477777 554 55
No 323
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.53 E-value=3.5e-06 Score=83.07 Aligned_cols=187 Identities=18% Similarity=0.116 Sum_probs=123.4
Q ss_pred Ccc-hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 125 IEG-LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 125 ~~G-~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
..| ..+..+..|+.+ +. ....++ ++|.++|+..+ +...+.+||.|+++..+.......+-..|+..++
T Consensus 68 p~G~i~eAqe~aA~~f-gA------d~tyFv--vNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvy 136 (557)
T COG1982 68 PEGPIKEAQELAARVF-GA------DHTYFV--VNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVY 136 (557)
T ss_pred CCccHHHHHHHHHHHh-CC------CceEEE--ECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEE
Confidence 344 345555666664 43 245555 89999998777 6777889999999999999888888899999888
Q ss_pred EecccCC----CCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC--CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 204 YRYYDPK----TVGLDFEGMIADIKAAPGGSFILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 204 v~~~~~~----~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT--G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
+...-.. -.+++.+.|++++.+++...++.++ .||| |++++.++ |++.+...+.++.+|++.. ..++
T Consensus 137 l~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi---tnpTYdGv~~n~~~---i~~~~~~~~a~v~~deah~-~~~~ 209 (557)
T COG1982 137 LEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVI---TNPTYDGVCYNLRK---IVELLHHYGAWVLYDEAHP-AHFD 209 (557)
T ss_pred ecCCCCccccccCCCCHHHHHHHHHhChhhheeEEE---ecCccceEeecHHH---HHHHHhhcCceEEhhhcCc-cccc
Confidence 8532122 1578999999999887665244444 4676 98887655 5566888899999999943 3322
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC--hhHHHHHHHHHHhh
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS--SDLAARVKSQLKRL 336 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~--~~~~~~~~~~l~~~ 336 (363)
..+ ..+. .......+++..|..|.++ ++.-+-.+ -..+ .-..+++.+.+...
T Consensus 210 ~~~--~l~~--~~~~~~~~~~tqS~HK~l~--alSQaS~i-Hv~~~~~~~~~r~nea~~~h 263 (557)
T COG1982 210 FSP--MLPE--SALNGGADFVTQSTHKLLA--ALSQASMI-HVKDGRAVNHERFNEALMMH 263 (557)
T ss_pred ccc--cCcc--hhhhcCceEEEechhhhhh--hhhhhHHH-hhCCCccCCHHHHHHHHHHH
Confidence 111 1111 1234578999999999885 55555441 2222 11234566655544
No 324
>PRK07046 aminotransferase; Validated
Probab=98.53 E-value=2.5e-05 Score=77.16 Aligned_cols=211 Identities=15% Similarity=0.088 Sum_probs=120.8
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+.+++ .+||+..|.-...-|+ -.+.+.+++.+.+.......+ +.....+|-+.+++.. + .+++.+ +
T Consensus 71 D~DG~-~yiD~~~g~g~~~lGh--~~p~i~~Av~~q~~~~~~~~~-~~~~~~~lAe~l~~~~----~----~~~v~F--~ 136 (453)
T PRK07046 71 DVDGH-RYDDFCLGDTGAMFGH--SPAPVARALAEQARRGLTTML-PSEDAAWVGEELARRF----G----LPYWQV--A 136 (453)
T ss_pred eCCCC-EEEEecccccccccCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHh----C----CCEEEE--E
Confidence 34444 7888876642111222 235666666665544322222 3333344555555442 1 368877 9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-Hhh--C----------CC------CeEEEecccCCCCCCCHHH
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FND--A----------RV------PWSEYRYYDPKTVGLDFEG 218 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~--~----------G~------~~~~v~~~~~~~~~~d~~~ 218 (363)
++|++|.+.+.++.+.+...++|+...-+|.++... +.. . |. .+..+| + -|++.
T Consensus 137 nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-nd~~~ 209 (453)
T PRK07046 137 TTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------F-NDLAA 209 (453)
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------C-CCHHH
Confidence 999999999977665554447888888888776321 111 1 11 011111 1 27889
Q ss_pred HHHHHHcCCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEE
Q 017967 219 MIADIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (363)
Q Consensus 219 l~~~l~~~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 297 (363)
+++.+.. .....+++-.-+.-.|. ..+.+-++++-++|+++|+++|.||+.. |..+-. . .....+-.++++
T Consensus 210 l~~~l~~--~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~G---g--~~~~~gv~PDi~ 281 (453)
T PRK07046 210 LEAALAD--GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPG---G--YTRAHGLEPDFL 281 (453)
T ss_pred HHHHhCC--CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCc---c--hhHHhCCCccce
Confidence 9988852 33444443322222343 3455788999999999999999999975 433210 0 111112223444
Q ss_pred EEEcCccccccccccceEEEEeeCChh
Q 017967 298 VAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 298 ~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
.|+|.+| .|+-+|.+ ++. ++
T Consensus 282 ---t~gK~lg-gG~Pi~av--~g~-~~ 301 (453)
T PRK07046 282 ---VVGKPIA-GGVPCAVY--GFS-AE 301 (453)
T ss_pred ---eehhhhc-CCCcceee--eeh-HH
Confidence 4799998 79999988 554 55
No 325
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.53 E-value=6.9e-06 Score=80.75 Aligned_cols=213 Identities=17% Similarity=0.148 Sum_probs=115.9
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+++ .+||+..|.-...-|+ -.+.+.+++.+.++......+ +.....+|-+.+++.+-. .+++.+ +.
T Consensus 45 ~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~la~~l~~~~p~-------~~~v~f--~~ 111 (431)
T PRK06209 45 VDGN-EYIEYGMGLRAVGLGH--AYPPVVEAVREALQDGCNFTR-PSAIELDAAESFLELIDG-------ADMVKF--CK 111 (431)
T ss_pred CCCC-EEEEccccccchhcCC--CCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhCCc-------cceEEE--ec
Confidence 3443 7888876642222222 235566666555543221111 222223455566555311 257777 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEc-CCCCcchHHHH-----hhCCCC--e--EEEecccCCCCCCCHHHHHHHHHcCCC
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLIS-SPTWGNHKNIF-----NDARVP--W--SEYRYYDPKTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~-~P~y~~~~~~~-----~~~G~~--~--~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (363)
+|++|.+.+..+.+.+....+|+.. .=+|..+.... ...|.. . ..+.+ ..-|++.+++.+...++
T Consensus 112 sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~d~~~l~~~l~~~~~ 186 (431)
T PRK06209 112 NGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF-----RYNDIASLEALFEDHPG 186 (431)
T ss_pred CHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc-----CCCCHHHHHHHHHhCCC
Confidence 9999999997665444322345443 11221111000 001110 0 01111 01278999998875433
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l 308 (363)
+...++ ..|- .|...+.+.+++|.++|+++|+++|+||+..++.... ........-.+++ ..|+|.+|
T Consensus 187 ~~aavi-~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-----~g~~~~~gv~PDi---~t~gK~lg- 254 (431)
T PRK06209 187 RIACVI-LEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-----RGAQKLYGIVPDL---SCFGKALG- 254 (431)
T ss_pred CEEEEE-Eccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-----chhhHHhCCCcce---eeehhhhc-
Confidence 343444 3442 3556778899999999999999999999987774321 1122111222333 56799998
Q ss_pred ccccceEEEEeeCChh
Q 017967 309 YAERIGAMNVVCSSSD 324 (363)
Q Consensus 309 ~G~RvG~i~~v~~~~~ 324 (363)
.|+-+|++ ++. ++
T Consensus 255 gG~p~~av--~~~-~~ 267 (431)
T PRK06209 255 NGFAVSAL--AGK-RE 267 (431)
T ss_pred CCcccEEE--EEH-HH
Confidence 68888988 554 55
No 326
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.52 E-value=1.2e-05 Score=76.91 Aligned_cols=219 Identities=18% Similarity=0.164 Sum_probs=137.1
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCc-chHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-GLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
+.+.+ .+||+-.+.=..--| .-.+.|.+++.+.+..+ ..|+.+. ..-++-+.+.+.+-. -+.|-+
T Consensus 49 DvDGn-~YIDy~~~~Gp~ilG--H~~p~V~~Av~~~l~~G--~~fg~Pte~Ei~~Aell~~~~p~-------~e~vrf-- 114 (432)
T COG0001 49 DVDGN-EYIDYVLGWGPLILG--HAHPAVVEAVQEQLERG--LSFGAPTELEVELAELLIERVPS-------IEKVRF-- 114 (432)
T ss_pred eCCCC-EeeehhccCcccccC--CCCHHHHHHHHHHHHhc--CCCCCCCHHHHHHHHHHHHhcCc-------ccEEEE--
Confidence 44554 788877664221222 23567888888877665 4465433 333444444444311 267766
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCC--CC-----------------eEEEecccCCCCCCCH
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR--VP-----------------WSEYRYYDPKTVGLDF 216 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G--~~-----------------~~~v~~~~~~~~~~d~ 216 (363)
+++||+|...+.++.+-+..-|+|+..+=+|.++...+. ..| .. ++.+|+ =|+
T Consensus 115 vnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~ 187 (432)
T COG0001 115 VNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDL 187 (432)
T ss_pred ecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCH
Confidence 999999988887766666566999999999988766543 332 11 222222 279
Q ss_pred HHHHHHHHcCCCCcEEEEE-cCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 217 EGMIADIKAAPGGSFILLH-GCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i-~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
+.+++++++.++....+++ +-+.| -|. ...++-+++|-++|+++|.++|.||+--+|...-. .......-.+
T Consensus 188 ~al~~~~~~~g~~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g-----Gaq~~~gi~P 261 (432)
T COG0001 188 EALEEAFEEYGDDIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG-----GAQGYYGVEP 261 (432)
T ss_pred HHHHHHHHHcCCcEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCc-----ccccccCcCc
Confidence 9999999876544444443 33455 344 34556788899999999999999999888865410 0101111111
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHH
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~ 334 (363)
+ +..|.|..| .|+-+|.+ +...+ +.+++.
T Consensus 262 D---lttlGKiIG-GGlP~ga~---gGr~e----iM~~~~ 290 (432)
T COG0001 262 D---LTTLGKIIG-GGLPIGAF---GGRAE----IMEQLA 290 (432)
T ss_pred c---hhhhhhhhc-CCcceeee---ccHHH----HHhhhC
Confidence 2 456799999 89999999 55465 555444
No 327
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.52 E-value=1.1e-05 Score=84.96 Aligned_cols=177 Identities=11% Similarity=0.068 Sum_probs=114.5
Q ss_pred CCCCCC---cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh------CCCCEEEEcCCCCcch
Q 017967 120 KEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------FPGAKVLISSPTWGNH 190 (363)
Q Consensus 120 ~~Y~~~---~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~ 190 (363)
+-|.|. +|..++...+.+++....|.+ ++. ++..||..+-.......+.. ...++|+++.-.+...
T Consensus 517 hPyqPe~~sqG~lq~i~elq~~l~eltGmd----~~S-l~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 517 HPFQPSNQVEGYQELIAQLEKWLCSITGFD----AIS-LQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred CCCCchHHhHHHHHHHHHHHHHHHHHHCCC----Ccc-cCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC
Confidence 445543 455555555555554444443 332 23455555433232122221 1225799999888777
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
...++..|++++.++++ .++.+|+++|++.+.++..+++++++.+|+| +|...+ ++++|.++|+++|..+++|.+
T Consensus 592 Pasa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgA 666 (939)
T TIGR00461 592 PASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGA 666 (939)
T ss_pred HHHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEec
Confidence 77789999999999984 4678999999999985434678888899999 887743 378888889999999999999
Q ss_pred CCC-CcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc----cccccceEE
Q 017967 271 YQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAM 316 (363)
Q Consensus 271 y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~----l~G~RvG~i 316 (363)
+.. ...-. .+ ....-.++..|..|.|+ ..|--+|.+
T Consensus 667 q~~al~~l~----~P------g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i 707 (939)
T TIGR00461 667 NMNAQVGLT----SP------GDLGADVCHLNLHKTFCIPHGGGGPGMGPI 707 (939)
T ss_pred ChhhCCCCC----Cc------cccCCCEEEecCCccCCCCCCCCCCCeEEE
Confidence 743 22110 00 11133466777788554 345557888
No 328
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.51 E-value=6.2e-06 Score=84.48 Aligned_cols=174 Identities=16% Similarity=0.104 Sum_probs=111.4
Q ss_pred CCcch-HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCCCCe
Q 017967 124 PIEGL-AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPW 201 (363)
Q Consensus 124 ~~~G~-~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~~ 201 (363)
...|. .+..+..|+.+ +. ..-.++ ++|+|.++..+ +...+.+||.|++..-++-..... +...|+++
T Consensus 171 ~~eG~i~eAq~~AA~~f-gA------d~tyFl--vNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~P 239 (720)
T PRK13578 171 IHEGAAKDAQKHAAKVF-NA------DKTYFV--LNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATP 239 (720)
T ss_pred CCChHHHHHHHHHHHHh-CC------CceEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeE
Confidence 44454 45555555654 43 244545 89999998777 677788999999999999888774 88999999
Q ss_pred EEEecccCCC----CCCCHHH-----HHHHHHcC-CC------CcEEEEEcCCCCCCCCCCCHHHHHHHHHH-HHhcCCe
Q 017967 202 SEYRYYDPKT----VGLDFEG-----MIADIKAA-PG------GSFILLHGCAHNPTGIDPTPEQWEKIADV-IQEKNHI 264 (363)
Q Consensus 202 ~~v~~~~~~~----~~~d~~~-----l~~~l~~~-~~------~~~~~~i~~p~NPTG~~~s~~~~~~i~~~-~~~~~~~ 264 (363)
+++.-.- +. .+++.+. +++++.+. ++ +.+++++.+|+ =-|.++..+ +|+++ ++.++ .
T Consensus 240 VYl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~---~I~~~~~h~~~-~ 313 (720)
T PRK13578 240 VYLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNAR---QVVDKIGHLCD-Y 313 (720)
T ss_pred EEeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHH---HHHHHhhccCC-c
Confidence 9986321 22 3446544 88888775 22 13555554432 249998764 55555 56777 9
Q ss_pred EEEecCCCCCc-CCCCCCchhHH-HHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 265 PFFDVAYQGFA-SGSLDNDASSV-RLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 265 ii~De~y~~~~-~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
|++||+|.+.. |.+.-++.+.. ......+..++++.|..|.++ ++--+.+
T Consensus 314 llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS~ 365 (720)
T PRK13578 314 ILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTSQ 365 (720)
T ss_pred EEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHhh
Confidence 99999986553 33210112111 111112356899999999884 6666655
No 329
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.51 E-value=2e-05 Score=77.37 Aligned_cols=218 Identities=9% Similarity=-0.014 Sum_probs=117.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|+ -.+.+.+++.+.++... ...+.......++-+.+++.... .-+++.+ +.+|+
T Consensus 46 ~ylD~~~g~~~~~lGh--~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~------~~~~v~f--~~sGs 115 (427)
T TIGR00508 46 RLIDGMSSWWAAIHGY--NHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPN------ALDCVFL--ADSGS 115 (427)
T ss_pred EEEEccchHHHhcCCC--CCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCC------CCCEEEE--eCCcH
Confidence 6888877641111122 23455555555443211 01111222334455555554211 1257877 99999
Q ss_pred HHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHh-hCCCC-------------eEEEecccCCCCC-----CCH
Q 017967 162 GSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARVP-------------WSEYRYYDPKTVG-----LDF 216 (363)
Q Consensus 162 ~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~~~-~~G~~-------------~~~v~~~~~~~~~-----~d~ 216 (363)
+|.+.+..+..... +| .+|+...-+|.+....+. ..|-. +..++.. ...+. -|+
T Consensus 116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~ 194 (427)
T TIGR00508 116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAI 194 (427)
T ss_pred HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHH
Confidence 99998866544331 33 578888888876543222 11210 1111110 00011 145
Q ss_pred HHHHHHHHcCCCCcEEEEEcCC--CCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC
Q 017967 217 EGMIADIKAAPGGSFILLHGCA--HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p--~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (363)
+.+++.+....++...++ ..| ++--|. ..+.+.+++|.++|+++|+++|+||++.++...+ ..+.... .+-.
T Consensus 195 ~~l~~~l~~~~~~vaavi-vEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G---~~~~~~~-~~v~ 269 (427)
T TIGR00508 195 TPLAKLMELHSDEIAAVI-LEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG---KLFACEH-AGVV 269 (427)
T ss_pred HHHHHHHHhcCCcEEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---ccchhhh-cCCC
Confidence 677777764333343444 444 444455 4478999999999999999999999987774432 1112211 1222
Q ss_pred CeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 294 MELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
+++++ ++|.++ .|+ =++.+ +. +++
T Consensus 270 pDi~~---~gK~l~-gG~~p~~a~--~~-~~~ 294 (427)
T TIGR00508 270 PDILC---VGKALT-GGYMTLSAT--VT-TDK 294 (427)
T ss_pred CCEEE---echhhh-cCcccceEE--EE-cHH
Confidence 34443 799996 675 45655 44 466
No 330
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.51 E-value=2.2e-05 Score=77.59 Aligned_cols=219 Identities=9% Similarity=-0.050 Sum_probs=120.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-C--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
.+||+..|.-...-|+ -.+.+.+++.+.++.. . ...+ .. +....+|+.+....+. .-+++.+ +.+|
T Consensus 55 ~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~-~~----~~~~~lAe~L~~~~p~--~~~~v~f--~~sG 123 (453)
T PRK06943 55 RYLDAISSWWVNLFGH--ANPRINAALKDQLDTLEHAMLAGC-TH----EPAIELAERLAALTGG--TLGHAFF--ASDG 123 (453)
T ss_pred EEEEcchHHHHhcCCC--CCHHHHHHHHHHHHhcCCcccccc-CC----HHHHHHHHHHHHhCCC--CCCEEEE--eCCC
Confidence 7888876642111222 2345555555544321 1 0112 22 2333444444332211 1247877 9999
Q ss_pred hHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHH-HHhhCC------------CCeEEEecccCCC--CC------
Q 017967 161 TGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKT--VG------ 213 (363)
Q Consensus 161 t~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~~~~~--~~------ 213 (363)
++|.+.+..+.... . +| .+|+...-+|.+... .+...| ..+..++..+... .+
T Consensus 124 seAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (453)
T PRK06943 124 ASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADV 203 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHH
Confidence 99999986654332 1 23 578888888866532 111111 0122233211000 00
Q ss_pred --CCHHHHHHHHHcCCCCcEEEEEcC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 214 --LDFEGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 214 --~d~~~l~~~l~~~~~~~~~~~i~~-p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
-+++.+++.+...++....+++-. .+.-.|. ..+.+-++++-++|++||+++|.||+..+|.-.+ ..+....+
T Consensus 204 ~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG---~~fa~~~~ 280 (453)
T PRK06943 204 AARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG---TFFACEQA 280 (453)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc---chhHHHhC
Confidence 124677777764444444554433 2555566 4678899999999999999999999999884332 12232222
Q ss_pred HhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 290 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
.-.++++++ +|.++ .| +-+|.+ ++. ++
T Consensus 281 -gv~PDivt~---gKgl~-gG~~Pi~av--~~~-~e 308 (453)
T PRK06943 281 -GVWPDFLCL---SKGIS-GGYLPLSLV--LSR-DA 308 (453)
T ss_pred -CCCCCeEee---ehhhc-cCcccceEE--EEc-HH
Confidence 333455544 89998 78 489988 664 55
No 331
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.50 E-value=3e-05 Score=76.93 Aligned_cols=218 Identities=10% Similarity=0.043 Sum_probs=119.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
.++|+..|.-...-|+. .+.+.+++.+.+... .. ..| ......+|-+.+++.. . ...+++.+ +.+|
T Consensus 48 ~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~----p--~~~~~v~f--~~sG 116 (466)
T PRK07030 48 RYLDAVSSWWVNVFGHA--NPRINQRIKDQVDQLEHVILAGF-SHEPVIELSERLVKIT----P--PGLSRCFY--ADNG 116 (466)
T ss_pred EEEEcchhHHhhcCCCC--CHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhC----C--CCcCEEEE--eCCc
Confidence 78888766421112222 345555555544321 10 112 1222234444444432 1 11257877 9999
Q ss_pred hHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHH-HhhCCC------------CeEEEecccCC--CCCC-----
Q 017967 161 TGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPK--TVGL----- 214 (363)
Q Consensus 161 t~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~--~~~~----- 214 (363)
++|.+.+..+...+ . +| .+|+...-+|.+.... +...|. .+..+|..+.. ..+.
T Consensus 117 sEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~ 196 (466)
T PRK07030 117 SSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEH 196 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHH
Confidence 99999987665443 1 23 5688888888665322 211111 12223321000 0111
Q ss_pred ---CHHHHHHHHHcCCCCcEEEEEcCC--CCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH
Q 017967 215 ---DFEGMIADIKAAPGGSFILLHGCA--HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (363)
Q Consensus 215 ---d~~~l~~~l~~~~~~~~~~~i~~p--~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (363)
+++.+++.+...++....++ ..| +.-.|. ..+.+-+++|.++|+++|+++|.||+..+|.-.+ ..+....
T Consensus 197 ~~~~l~~le~~~~~~~~~iAAvi-~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG---~~~a~~~ 272 (466)
T PRK07030 197 SRRMFAHMEQTLAEHHDEIAAVI-VEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG---TMFACEQ 272 (466)
T ss_pred HHHHHHHHHHHHHhCCCceEEEE-EecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc---cchHHHh
Confidence 24566777764444444444 344 444465 4567889999999999999999999998885332 1222222
Q ss_pred HHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 289 ~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
+ .-.++++++ +|.++ .| +-+|.+ ++. ++
T Consensus 273 ~-gv~PDiv~~---gKgl~-gG~~Pi~av--~~~-~e 301 (466)
T PRK07030 273 A-GIRPDFLCL---SKALT-GGYLPLAAV--LTT-DT 301 (466)
T ss_pred c-CCCCCEEee---ehhcc-CCcccceEE--Eec-HH
Confidence 2 333455544 89998 78 489988 654 66
No 332
>PRK07678 aminotransferase; Validated
Probab=98.50 E-value=3.3e-05 Score=76.39 Aligned_cols=223 Identities=12% Similarity=0.046 Sum_probs=119.3
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+.+ .+||+..|.-...-|+ -.+.+.+++.+.++.... ..| ...-..+|-+.+++.+ .. .+++.+
T Consensus 43 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~~~-~~~~~~~lae~l~~~~----~~---~~~v~f- 110 (451)
T PRK07678 43 DIQGN-RYLDGMSGLWCVNVGY--GRKELAEAAYEQLKTLSYFPLTQ-SHEPAIKLAEKLNEWL----GG---EYVIFF- 110 (451)
T ss_pred eCCCC-EEEEccccHHhhcCCC--CCHHHHHHHHHHHHhcCcccccc-CCHHHHHHHHHHHHhC----CC---CCEEEE-
Confidence 33443 7888876642222222 234555555554432110 112 1122234444444442 11 247777
Q ss_pred eccchhHHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHh-hCCC------------CeEEEecccCCC--CC-
Q 017967 156 QGLSGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT--VG- 213 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~--~~- 213 (363)
+++|++|.+.+..+...+. +| .+|+...-+|.+....+. ..|. .+..+|..+... ++
T Consensus 111 -~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (451)
T PRK07678 111 -SNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIE 189 (451)
T ss_pred -eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccC
Confidence 9999999999877655442 23 578888877866543221 1111 122232211000 00
Q ss_pred ----CC---HHHHHHHHH-cCCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchh
Q 017967 214 ----LD---FEGMIADIK-AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (363)
Q Consensus 214 ----~d---~~~l~~~l~-~~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 284 (363)
.+ .+.+++.+. ..+++...+++-.-+.--|.. .+.+-++++.++|++||+++|.||+..+|.-.+ ..+
T Consensus 190 ~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~ 266 (451)
T PRK07678 190 SEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG---KAF 266 (451)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc---hhH
Confidence 01 223555564 223344455543333334555 567889999999999999999999998884322 122
Q ss_pred HHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 285 SVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 285 ~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
....+ .-.++++ .|+|.+| .| +-+|.+ ++. ++
T Consensus 267 ~~~~~-gv~PDiv---t~gK~lg-gG~~Pi~av--~~~-~~ 299 (451)
T PRK07678 267 GFMNY-GVKPDII---TMAKGIT-SAYLPLSAT--AVK-KE 299 (451)
T ss_pred HHHhc-CCCCCEE---Eeecccc-cCCcceeEE--EEc-HH
Confidence 22222 2224444 5699998 67 688988 665 66
No 333
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.49 E-value=2.7e-05 Score=76.47 Aligned_cols=218 Identities=11% Similarity=0.031 Sum_probs=118.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|+- .+.+.+++.+.++.... ..+.......+|-+.+++.+- ..-+++.+ +.+|+
T Consensus 45 ~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p------~~~~~v~f--~~sGs 114 (429)
T PRK06173 45 RLIDGMSSWWAALHGYN--HPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILP------PSLNKIFF--ADSGS 114 (429)
T ss_pred EEEEccchHHhccCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCC------CCcCEEEE--eCCch
Confidence 78888766421111222 34555555554432110 111122333445555554421 11358877 99999
Q ss_pred HHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCC------------C-CeEEEecccCCCCC-----CCH
Q 017967 162 GSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDAR------------V-PWSEYRYYDPKTVG-----LDF 216 (363)
Q Consensus 162 ~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G------------~-~~~~v~~~~~~~~~-----~d~ 216 (363)
+|.+.+..+...+. +| .+|+...-+|.+... .+...| . .+..+|.... .++ -++
T Consensus 115 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l 193 (429)
T PRK06173 115 VAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDEAI 193 (429)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHHHH
Confidence 99999876655441 33 568888888866421 111111 0 1122222100 010 135
Q ss_pred HHHHHHHHcCCCCcEEEEEcCC--CCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC
Q 017967 217 EGMIADIKAAPGGSFILLHGCA--HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p--~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (363)
+.+++.+...+++...+++ .| +.-.|.. .+++-+++|.++|++||+++|+||+..+|...+ ..+....+ +-.
T Consensus 194 ~~l~~~i~~~~~~iAAvi~-EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~~-gv~ 268 (429)
T PRK06173 194 EPLQDLLEQKGDEIAALIL-EPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG---KLFALEHA-GVV 268 (429)
T ss_pred HHHHHHHHhCCCcEEEEEE-cchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC---cchHHHhc-CCC
Confidence 6677777644444545554 44 5656665 688999999999999999999999987764322 12222222 222
Q ss_pred CeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 294 MELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
+++++ |+|.++ .|+ =+|.+ +.. ++
T Consensus 269 PDiv~---~gK~l~-gG~~p~~a~--~~~-~~ 293 (429)
T PRK06173 269 PDIMC---IGKALT-GGYLTLSAT--ITT-EA 293 (429)
T ss_pred CCEEE---eehhhh-CCccccceE--Eec-HH
Confidence 34443 899997 674 56666 544 55
No 334
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.49 E-value=2.6e-05 Score=76.83 Aligned_cols=162 Identities=13% Similarity=0.108 Sum_probs=94.8
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHH-HhhC---------C---CCeEEEeccc--
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDA---------R---VPWSEYRYYD-- 208 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~-~~~~---------G---~~~~~v~~~~-- 208 (363)
+++.+ +.+|++|.+.+..+...+. +| .+|+...-+|.+.... +... + ..+..+|...
T Consensus 107 ~~v~f--~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~ 184 (442)
T PRK13360 107 NHVFF--TNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDL 184 (442)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchh
Confidence 57877 9999999999876655442 22 5788888888665321 1111 1 1122233210
Q ss_pred -CCCCCC--------CHHHHHHHHHcC-CCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 209 -PKTVGL--------DFEGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 209 -~~~~~~--------d~~~l~~~l~~~-~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
...+.. ..+.+++.+... +++...+++-.-+--.|.. .+.+-+++|.++|+++|+++|+||+..+|.-.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt 264 (442)
T PRK13360 185 ARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL 264 (442)
T ss_pred hccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 000111 145777777643 2334444444334445655 46778899999999999999999998888432
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
+ .......+ .-.+++ -.|+|.++ .| +-+|.+ ++. ++
T Consensus 265 G---~~~a~~~~-gv~PDi---vt~gK~l~-gG~~P~gav--~~~-~~ 301 (442)
T PRK13360 265 G---APFAAQYF-GVTPDL---LTCAKGLT-NGAIPMGAV--FVS-SE 301 (442)
T ss_pred c---cchhhhhc-CCCCce---eeeeeccc-cCccceEEE--EEc-HH
Confidence 2 11222111 222333 37799997 56 678888 665 55
No 335
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.47 E-value=1.8e-06 Score=82.20 Aligned_cols=249 Identities=14% Similarity=0.080 Sum_probs=128.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC-CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.-...-|+ -.+.+.+++.+..... .|.. .....+...++++.+....+. .-+++.+ +.+|++
T Consensus 17 ~~lD~~~~~~~~~lGh--~~p~i~~ai~~~~~~~---~~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~sGse 87 (339)
T PF00202_consen 17 EYLDFMSGYGSVNLGH--NHPEIAEAIAEQANKL---NYVSFSGFTHPEAAELAEKLAELFPG--GLDRVFF--ANSGSE 87 (339)
T ss_dssp EEEESSHHHHTTTT-B--T-HHHHHHHHHHHHHC---SSCSTTTSEEHHHHHHHHHHHHHSST--TEEEEEE--ESSHHH
T ss_pred EEEECCCCccceecCC--CccccchhHHHHhhhc---ccccccceeccchhhhhhhhhhcccc--ccceeee--ccCchH
Confidence 6888876642222222 3456666666655432 1211 111223334444444332211 2468877 999999
Q ss_pred HHHHHHHHHH------HhCCCCEEEEcCCCCcchHH-HHh------------hCCCCeEEEecccCCC---CCCCHHHHH
Q 017967 163 SLRLAAALIE------RYFPGAKVLISSPTWGNHKN-IFN------------DARVPWSEYRYYDPKT---VGLDFEGMI 220 (363)
Q Consensus 163 al~l~~~l~~------~~~~gd~Vlv~~P~y~~~~~-~~~------------~~G~~~~~v~~~~~~~---~~~d~~~l~ 220 (363)
|++.+..+.. ....-.+|+...-+|.+... .+. .....+..+|..+... ..-..+.++
T Consensus 88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 167 (339)
T PF00202_consen 88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALE 167 (339)
T ss_dssp HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHH
Confidence 9999977655 22233789988888865432 111 1112345566521100 000111233
Q ss_pred HHHHc-CCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 221 ADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 221 ~~l~~-~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
+.+.+ ..+....+++-.-+.-.|... +.+-+++|.++|+++|+++|.||+..+|.-.+. ...... ..-.+++++
T Consensus 168 ~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~---~~a~~~-~gv~PDiv~ 243 (339)
T PF00202_consen 168 ELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK---FFASEH-YGVDPDIVT 243 (339)
T ss_dssp HHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS---SSGHHH-HTSSSSEEE
T ss_pred HHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC---ccceec-ccccCcccc
Confidence 33222 123333444333333345444 567789999999999999999999999943321 223332 344455554
Q ss_pred EEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+ +|.++ .|+-+|.+ ++. ++ +.+.+..........-++++..++...|
T Consensus 244 ~---gK~l~-gG~p~sav--~~~-~~----i~~~~~~~~~~~T~~g~p~~~aaa~~~l 290 (339)
T PF00202_consen 244 F---GKGLG-GGLPISAV--LGS-EE----IMEAFQPGSHGSTFGGNPLSCAAALATL 290 (339)
T ss_dssp E---EGGGG-TTSSEEEE--EEE-HH----HHTTSCTTSSTCTTTT-HHHHHHHHHHH
T ss_pred c---ccchh-hhhhcccc--ccc-ch----hhccccccccccccccchHhhhhhhhHH
Confidence 4 59998 78999999 665 55 4444432222233344555555554443
No 336
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.45 E-value=3.2e-05 Score=76.63 Aligned_cols=219 Identities=11% Similarity=0.035 Sum_probs=120.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCC-CCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~-Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+||+..|.-...-|+ -.+.+.+++.+.++.- .... +.......+|-+.+++.+ .. .-+++.+ +++|+
T Consensus 57 ~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~----p~--~~~~v~f--~~SGs 126 (460)
T PRK06916 57 EYYDGVSSIWLNVHGH--QVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVV----PE--GLKKVFY--SDSGA 126 (460)
T ss_pred EEEEcchhHHHhhcCC--CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhC----CC--CCCEEEE--eCCcH
Confidence 7888866542111122 2345555555444321 0011 112222334444554442 11 1257877 99999
Q ss_pred HHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchHHHH-hhCC------------CCeEEEecccCC--CCC-------
Q 017967 162 GSLRLAAALIERY-----FPG-AKVLISSPTWGNHKNIF-NDAR------------VPWSEYRYYDPK--TVG------- 213 (363)
Q Consensus 162 ~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~~~-~~~G------------~~~~~v~~~~~~--~~~------- 213 (363)
+|.+.+..+.+.+ .+| .+|+...-+|.+....+ ...| ..+..+|..+.. .++
T Consensus 127 eAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~ 206 (460)
T PRK06916 127 TAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIV 206 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence 9999987765543 233 57888888886653322 1111 112223221000 011
Q ss_pred -CCHHHHHHHHHcCCCCcEEEEEcCC--CCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 214 -LDFEGMIADIKAAPGGSFILLHGCA--HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 214 -~d~~~l~~~l~~~~~~~~~~~i~~p--~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
-+++.+++.+...++....+++ .| +.-.|.. .+.+-+++|.++|+++|+++|.||+..+|.-.+ ..+....+
T Consensus 207 ~~~~~~l~~~l~~~~~~iAAvi~-EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG---~~~a~~~~ 282 (460)
T PRK06916 207 KKHLEELEELLKEKHEEIAAIIV-EPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG---KMFACEHE 282 (460)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEE-eccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc---hhhHHHhc
Confidence 1356677777644444444443 44 5555665 588899999999999999999999998874322 12222222
Q ss_pred HhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 290 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
.-.++++ .|+|.++ .| +-+|.+ ++. ++
T Consensus 283 -gv~PDiv---~~gK~l~-gG~~Pi~av--~~~-~e 310 (460)
T PRK06916 283 -NVTPDIM---TAGKGLT-GGYLPIAIT--VTT-DE 310 (460)
T ss_pred -CCCCCee---eeehhhh-cCcccccee--eec-HH
Confidence 2224444 4699998 78 488988 665 55
No 337
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.42 E-value=6.3e-05 Score=74.66 Aligned_cols=161 Identities=14% Similarity=0.106 Sum_probs=98.6
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHh-hCCC------------CeEEEecccCC
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPK 210 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~ 210 (363)
+++.+ +.+|++|.+.+..+...+. +| .+|+...-+|.+...... ..|. .+..+|..+..
T Consensus 130 ~~v~f--~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~ 207 (472)
T PRK08742 130 SKVFY--ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAY 207 (472)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcc
Confidence 57877 9999999999977665541 33 578888888866543221 1111 12223321100
Q ss_pred --CCCC--------CHHHHHHHHHcCCCCcEEEEEcCC--CCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 211 --TVGL--------DFEGMIADIKAAPGGSFILLHGCA--HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 211 --~~~~--------d~~~l~~~l~~~~~~~~~~~i~~p--~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
..+. +++.+++.+...++....++ ..| +.-.|. ..+.+-++++.++|+++|+++|.||+..+|...
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI-~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRt 286 (472)
T PRK08742 208 LAEPGQSAEDYALQAADALQALFEQSPGEICALI-LEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRT 286 (472)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEE-EccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 0111 25667777754334444444 455 555676 567888999999999999999999999988543
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
+ ..+....+ +-.++++++ +|.++ .|+ -+|.+ ++. ++
T Consensus 287 G---~~~a~e~~-gv~PDiv~~---gKgl~-gG~~Plaav--~~~-~e 323 (472)
T PRK08742 287 G---TLFACEQA-GVMPDLLCL---SKGLT-GGFLPLSAV--LAT-QQ 323 (472)
T ss_pred c---cchHHHhc-CCCCCEEEE---ccccc-CCCCCccee--ecc-HH
Confidence 2 12222222 333455544 89997 684 78888 554 66
No 338
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.41 E-value=6.6e-05 Score=74.43 Aligned_cols=155 Identities=14% Similarity=0.065 Sum_probs=91.8
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCC----------C--CeEEEecccCCC--CC--------
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR----------V--PWSEYRYYDPKT--VG-------- 213 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G----------~--~~~~v~~~~~~~--~~-------- 213 (363)
+++|++|.+.+..+.+......+|+...-+|.+...... ..| . .+..+|...... ++
T Consensus 133 ~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 212 (464)
T PRK06938 133 GPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVR 212 (464)
T ss_pred CCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHH
Confidence 369999999997765544333678888877866543221 111 0 123333211100 11
Q ss_pred CCHHHHHHHHHcCC---CCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 214 LDFEGMIADIKAAP---GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 214 ~d~~~l~~~l~~~~---~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
.+++.+++.+.+.. +....+++-.-+---|.+ .+.+-++++-++|+++|+++|.||+..+|.-.+ ..+....
T Consensus 213 ~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~e~- 288 (464)
T PRK06938 213 ANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG---KMFAFEH- 288 (464)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---HHHHHHh-
Confidence 13567777776421 123444433223333554 568999999999999999999999999884322 1222222
Q ss_pred HhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
.+-.++++++ +|.+| .|+-+|.+ ++.
T Consensus 289 ~gv~PDiv~~---gKglg-gG~PlsAv--~~~ 314 (464)
T PRK06938 289 AGIIPDVVVL---SKAIG-GSLPLAVV--VYR 314 (464)
T ss_pred cCCCCCEEEe---ecccc-CCCceEEE--eeh
Confidence 2333455544 89998 78999999 654
No 339
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.40 E-value=8.5e-06 Score=78.30 Aligned_cols=205 Identities=22% Similarity=0.256 Sum_probs=109.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC-----CC-Ccc---hHHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY-----LP-IEG---LAAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y-----~~-~~G---~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
..|+|-..++ ++.+.+++++...+......+| .. ..- ++.+....+.-+++.. -+.+. +-
T Consensus 21 ~~l~LiaSEN-------~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~---~~~w~-an 89 (399)
T PF00464_consen 21 STLNLIASEN-------YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE---PKEWY-AN 89 (399)
T ss_dssp HSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S---TTTEE-EE
T ss_pred cCccccCccc-------ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC---cccce-EE
Confidence 5788876553 2466777776554432221222 11 111 2333333344444432 11122 33
Q ss_pred EeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---HH-------hhCCCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IF-------NDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~-------~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
++..+|+.|...+ +.+++.|||+|+..++...++.. .. .....+.+.|+++ ++++.+|.+++++.+.
T Consensus 90 vqp~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d-~~~~~ID~d~l~~~a~ 166 (399)
T PF00464_consen 90 VQPHSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD-PDTGLIDYDELEKLAK 166 (399)
T ss_dssp ---SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHHH
T ss_pred eecCCchHHHHHH--HHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee-cCCCeECHHHHHHHHh
Confidence 4678889887776 67778899999999988766642 11 1133567888885 3578999999999888
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
+. +++++++..-..|- .-+++++.++|.+.|.+++.|-+.. ++.-++.-++ ++ +. --++..|..
T Consensus 167 ~~--kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~--P~----~~--ADvvt~sTh 231 (399)
T PF00464_consen 167 EH--KPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPN--PF----PY--ADVVTGSTH 231 (399)
T ss_dssp HH----SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----GC----CT--SSEEEEESS
T ss_pred hc--CCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecC--cc----cc--ceEEEeecc
Confidence 63 34566655544442 3467777888999999999999962 3322221111 11 11 237788999
Q ss_pred cccccccccceEEEEeeC
Q 017967 304 KNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 304 K~~~l~G~RvG~i~~v~~ 321 (363)
|+| +|=|-|.| .+.
T Consensus 232 Ktl--~GPrggiI--~~~ 245 (399)
T PF00464_consen 232 KTL--RGPRGGII--LTN 245 (399)
T ss_dssp GGG---SSS-EEE--EES
T ss_pred ccc--cccCceEE--EEc
Confidence 998 58899998 665
No 340
>PRK07481 hypothetical protein; Provisional
Probab=98.40 E-value=7.3e-05 Score=73.90 Aligned_cols=221 Identities=15% Similarity=0.091 Sum_probs=115.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCC-CC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-EY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
.++|+..|.-...-|+ -.+.+.+++.+.++..... .+ ... +.+..+|+.+....++ -.-+++.+ +.+|
T Consensus 43 ~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~~~~----~~~~~lae~L~~~~~~-~~~~~v~f--~~sG 113 (449)
T PRK07481 43 KLLDGVGGLWNVNVGH--NREEVKEAIVRQLDELEYYSTFDGTTH----PRAIELSYELIDMFAP-EGMRRVFF--SSGG 113 (449)
T ss_pred EEEECchhHHhhcCCC--CCHHHHHHHHHHHHhccceecccccCC----HHHHHHHHHHHHhcCC-CCCCEEEE--cCch
Confidence 6888866532112222 2345556655554331101 01 122 2333344444332211 11257877 9999
Q ss_pred hHHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHH-HhhCC------------CCeEEEecccCC--CCC-CCHHH
Q 017967 161 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYDPK--TVG-LDFEG 218 (363)
Q Consensus 161 t~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~-~~~~G------------~~~~~v~~~~~~--~~~-~d~~~ 218 (363)
++|.+.+..+.+.+. +| .+|+...-+|.+.... +...| -.+..++..... .++ -|++.
T Consensus 114 sEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 193 (449)
T PRK07481 114 SDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEE 193 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHH
Confidence 999999877655442 33 5688888888665321 11111 012222211000 011 13333
Q ss_pred H--------HHHHH-cCCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH
Q 017967 219 M--------IADIK-AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (363)
Q Consensus 219 l--------~~~l~-~~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (363)
+ ++.+. ..++....+++-.-+.-.|.. .+.+-++++.++|+++|+++|.||+..+|.-.+ ..+....
T Consensus 194 ~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~ 270 (449)
T PRK07481 194 LARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG---SWFGSRG 270 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc---hhhHhhh
Confidence 3 33333 222334455444334444664 567779999999999999999999999884322 1222221
Q ss_pred HHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 289 ~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
.+-.+++++ ++|.++ .| +-+|.+ ++. ++
T Consensus 271 -~gv~PDiv~---~gKgl~-gG~~Pi~av--~~~-~~ 299 (449)
T PRK07481 271 -WGVKPDIMC---LAKGIT-SGYVPLGAT--MVN-AR 299 (449)
T ss_pred -cCCCCCEEE---Eeeccc-CCCcCceEE--EEc-HH
Confidence 222344443 489998 67 488988 665 55
No 341
>PRK06917 hypothetical protein; Provisional
Probab=98.40 E-value=6.9e-05 Score=73.98 Aligned_cols=226 Identities=12% Similarity=-0.010 Sum_probs=117.0
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+++ .+||+..|.-...-|+ -.+.|.+++.+.+.... +.+..... .+.+..+|+.+..... ...+++.+ +.
T Consensus 28 ~dG~-~ylD~~~g~~~~~lGh--~hp~v~~Ai~~ql~~~~-~~~~~~~~-~~~~~~lae~L~~~~p--~~~~~v~f--~~ 98 (447)
T PRK06917 28 QNGN-KYFDGSSGAVTAGIGH--GVKEIADAIKEQAEEVS-FVYRSQFT-SEPAEKLAKKLSDLSP--GDLNWSFF--VN 98 (447)
T ss_pred CCCC-EEEECchhHHhccCCC--CCHHHHHHHHHHHhhCc-CccccccC-CHHHHHHHHHHHHhCC--CCCCEEEE--eC
Confidence 3443 7888876642111222 23455555555443211 11111011 1233344444433211 11256777 99
Q ss_pred chhHHHHHHHHHHHHh---C--CC-CEEEEcCCCCcchHHHH-hhCCC------------CeEEEecccCCC--CCC---
Q 017967 159 SGTGSLRLAAALIERY---F--PG-AKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKT--VGL--- 214 (363)
Q Consensus 159 ggt~al~l~~~l~~~~---~--~g-d~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~~~~~--~~~--- 214 (363)
+|++|.+.+..+.... . +| .+|+...-+|.+..... ...|. .+..++...... ++-
T Consensus 99 sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 178 (447)
T PRK06917 99 SGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYP 178 (447)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChH
Confidence 9999999986654332 1 33 57888888886654322 21111 111222100000 000
Q ss_pred -----CHHHHHHHHHcCC-CCcEEEEEcCCC-CCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHH
Q 017967 215 -----DFEGMIADIKAAP-GGSFILLHGCAH-NPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (363)
Q Consensus 215 -----d~~~l~~~l~~~~-~~~~~~~i~~p~-NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (363)
+++.+++.+.... +....+++-.-+ |--|. ..+.+-+++|.++|+++|+++|.||+..+|.-.+ .....
T Consensus 179 ~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG---~~~a~ 255 (447)
T PRK06917 179 TCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG---AMFAM 255 (447)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc---chhhH
Confidence 2456677776432 233344432223 23344 4578889999999999999999999998873221 11222
Q ss_pred HHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 287 ~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
..+ +-.+++ -.|+|.++ .|+ -+|.+ ++. ++
T Consensus 256 ~~~-gv~PDi---~~~gK~l~-~G~~Pi~a~--~~~-~~ 286 (447)
T PRK06917 256 EHW-GVEPDI---MTLGKGLG-AGYTPIAAT--VVS-DR 286 (447)
T ss_pred Hhc-CCCCCE---EEeeehhc-cCCcceEEE--EEc-HH
Confidence 222 222344 35699998 785 78888 554 55
No 342
>PRK07483 hypothetical protein; Provisional
Probab=98.40 E-value=6.3e-05 Score=74.19 Aligned_cols=220 Identities=16% Similarity=0.168 Sum_probs=116.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|+ -.+.+.+++.+.++... ...+.. .+....+|+.+...... ..+++.+ +.+|+
T Consensus 31 ~ylD~~~g~~~~~lGh--~~p~v~~av~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p~--~~~~v~f--~~sGs 100 (443)
T PRK07483 31 RYLDASGGAAVSCLGH--SHPRVIAAIHAQIDRLAYAHTSFFT----TEPAEALADRLVAAAPA--GLEHVYF--VSGGS 100 (443)
T ss_pred EEEEcCccHhhhccCC--CCHHHHHHHHHHHHhccCccccccC----CHHHHHHHHHHHHhCCC--CCCEEEE--cCCcH
Confidence 7888876642222222 23556666655553311 011111 22333444444332111 1258877 99999
Q ss_pred HHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCCC------------CeEEEecccC-CCC--CC-----
Q 017967 162 GSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDP-KTV--GL----- 214 (363)
Q Consensus 162 ~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~-~~~--~~----- 214 (363)
+|.+.+..+...+. +| .+|+...-+|.+... .+...|- .+..++.... ... ..
T Consensus 101 EAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (443)
T PRK07483 101 EAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAY 180 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHH
Confidence 99999977665551 33 468887777765532 1211110 1122221000 000 00
Q ss_pred ---CHHHHHHHHHc-CCCCcEEEEEcCCCC-CCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH
Q 017967 215 ---DFEGMIADIKA-APGGSFILLHGCAHN-PTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (363)
Q Consensus 215 ---d~~~l~~~l~~-~~~~~~~~~i~~p~N-PTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (363)
.++.+++.+.. .++....+++-.-+- --| ...+.+-+++|.++|++||+++|.||+..+|.-.+ ..+....
T Consensus 181 ~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a~~~ 257 (443)
T PRK07483 181 GQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG---TLFACEE 257 (443)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc---HHHHHhh
Confidence 12566665542 223344444332221 124 45678889999999999999999999998884322 1222222
Q ss_pred HHhcCCeEEEEEcCccccccccc-cceEEEEeeCChh
Q 017967 289 FATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSD 324 (363)
Q Consensus 289 ~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~ 324 (363)
+ .-.+++++ |+|.++ .|+ -+|.+ ++. ++
T Consensus 258 ~-gv~PDiv~---~gK~l~-gG~~Pi~av--~~~-~~ 286 (443)
T PRK07483 258 D-GVAPDLVT---IAKGLG-AGYQPIGAV--LAS-DR 286 (443)
T ss_pred c-CCCCCeee---ehhhhc-cCccccEEE--EEc-HH
Confidence 2 22344443 499998 785 89988 665 55
No 343
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.40 E-value=5.6e-05 Score=74.06 Aligned_cols=214 Identities=12% Similarity=0.074 Sum_probs=114.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.-...-|+ -.+.+.+++.+.++......+ .......+|.+.+++.. .. .-+++.+ +.+|+
T Consensus 41 ~ylD~~~g~~~~~lGh--~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p~--~~~~v~f--~~SGs 110 (422)
T PRK05630 41 TVIDAMSSWWSAAHGH--GHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLT----DN--GLDHVFY--SDSGS 110 (422)
T ss_pred EEEEcchhHHHhcCCC--CCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhC----CC--CcCEEEE--eCCcH
Confidence 7888876643222222 234555555554432110111 11222334444444442 11 1257877 99999
Q ss_pred HHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHh-hCC-------------CCeEEEecccCCCCCCC------
Q 017967 162 GSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DAR-------------VPWSEYRYYDPKTVGLD------ 215 (363)
Q Consensus 162 ~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~~~-~~G-------------~~~~~v~~~~~~~~~~d------ 215 (363)
+|.+.+..+...+. +| .+|+...-+|.+....+. ..+ ..+..+|.. .....+
T Consensus 111 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~ 188 (422)
T PRK05630 111 VSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP--PVRGSSPQEISE 188 (422)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC--cccCCChHHHHH
Confidence 99999876655442 23 468888888876432221 111 012222221 001111
Q ss_pred -HHHHHHHHHcCCCCcEEEEEcCC--CCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh
Q 017967 216 -FEGMIADIKAAPGGSFILLHGCA--HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (363)
Q Consensus 216 -~~~l~~~l~~~~~~~~~~~i~~p--~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (363)
.+.+++.+. ++...+++ .| +.-.|.. .+.+-+++|.++|+++|+++|.||+..+|...+ ..+... ...
T Consensus 189 ~~~~~~~~~~---~~iAAvi~-EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~~-~~g 260 (422)
T PRK05630 189 YLRSLELLID---ETVAAIII-EPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG---ELFATL-AAG 260 (422)
T ss_pred HHHHHHHHHh---hceEEEEE-echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc---hhhHHH-hcC
Confidence 234444443 23444443 44 5556764 567889999999999999999999998774322 122221 112
Q ss_pred cCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 292 RGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
-.++++ .|+|.++ .| .-+|++ ++. ++
T Consensus 261 v~PDi~---t~gK~l~-gG~~p~~av--~~~-~~ 287 (422)
T PRK05630 261 VTPDIM---CVGKALT-GGFMSFAAT--LCT-DK 287 (422)
T ss_pred CCCCee---eeechhh-cCcccccee--ecc-HH
Confidence 223444 7799886 57 478888 554 65
No 344
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.36 E-value=9.1e-05 Score=73.11 Aligned_cols=163 Identities=11% Similarity=0.068 Sum_probs=94.3
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHh-hCC------------CCeEEEeccc--
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DAR------------VPWSEYRYYD-- 208 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~~~~-~~G------------~~~~~v~~~~-- 208 (363)
+++.+ +.+|++|.+.+..+...+. ++ .+|+...-+|.+...... ..| ..+..+|...
T Consensus 110 ~~v~f--~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (445)
T PRK09221 110 DHVFF--TNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDL 187 (445)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccc
Confidence 57877 9999999999876655442 22 478888888866532111 111 1122233210
Q ss_pred -CCCCCC--------CHHHHHHHHHcCC-CCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 209 -PKTVGL--------DFEGMIADIKAAP-GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 209 -~~~~~~--------d~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
...+.. ..+.+++.+.... ++...+++-.-+.-.|... +.+-+++|.++|+++|+++|+||+..+|.-.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 267 (445)
T PRK09221 188 PENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRL 267 (445)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcC
Confidence 000111 1356777776432 3344555444455556644 5677899999999999999999998887432
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhH
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDL 325 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~ 325 (363)
+ ..+....+ .-.++ +-.|+|.++ .| +-+|.+ ++. ++.
T Consensus 268 G---~~~~~~~~-gv~PD---i~~~gK~l~-gG~~Pi~av--~~~-~~i 305 (445)
T PRK09221 268 G---AAFAAERF-GVTPD---IITFAKGLT-NGAIPMGAV--IAS-DEI 305 (445)
T ss_pred c---hhhHHHhc-CCCCC---EEEeccccc-cCcccceee--EEc-HHH
Confidence 2 12222222 21223 347799997 56 568888 554 663
No 345
>PRK07036 hypothetical protein; Provisional
Probab=98.36 E-value=0.00015 Score=71.92 Aligned_cols=227 Identities=12% Similarity=0.103 Sum_probs=118.0
Q ss_pred cCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 79 ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 79 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.+++ .+||+..|.-...-|+ -.+.+.+++.+.+... ....+.. ...+.+..+|+.+...... .-+++.+ +
T Consensus 48 ~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~~lae~L~~~~p~--~~~~v~f--~ 118 (466)
T PRK07036 48 ADGR-RYLDGIGGMWCVNVGY--GREEMADAIADQARRLPYYTPFGD--MTNAPAAELAAKLAELAPG--DLNHVFL--T 118 (466)
T ss_pred CCCC-EEEECcccHHhhcCCC--CCHHHHHHHHHHHHhCcccccccc--cCCHHHHHHHHHHHHhCCC--CcCEEEE--e
Confidence 3443 6888876642111222 2345555555544321 1111110 1123334444444332111 1257877 9
Q ss_pred cchhHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHHHh-hCCC------------CeEEEecccC--CCCCCC-
Q 017967 158 LSGTGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDP--KTVGLD- 215 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~--~~~~~d- 215 (363)
.+|++|.+.+..+...+ . +| .+|+...-+|.+....+. ..|. .+..++..+. ...+..
T Consensus 119 ~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 198 (466)
T PRK07036 119 TGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSE 198 (466)
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCCh
Confidence 99999999987665444 1 22 578888877866543221 1111 1222322100 011211
Q ss_pred -------HHHHHHHHHc-CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHH
Q 017967 216 -------FEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (363)
Q Consensus 216 -------~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (363)
.+.+++.+.. .++....+++-..+.-.|.. .+.+-+++|.++|++||+++|.||+..+|.-.+ ..+..
T Consensus 199 ~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~ 275 (466)
T PRK07036 199 AAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG---HFFAS 275 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc---hhhhh
Confidence 2345555543 23334455444344444664 567888999999999999999999998884321 11222
Q ss_pred HHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 287 ~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
.....-.++++ .|+|.++ .| +-+|.+ ++. ++
T Consensus 276 ~~~~gv~PDiv---t~gK~l~-gG~~Pi~av--~~~-~~ 307 (466)
T PRK07036 276 EAVFGIQPDII---TFAKGLT-SGYQPLGAV--IIS-ER 307 (466)
T ss_pred hhhcCCCCCEE---EEccccc-cCccccEEE--EEc-HH
Confidence 21112223433 5699998 68 488998 665 66
No 346
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.36 E-value=0.00011 Score=73.54 Aligned_cols=223 Identities=17% Similarity=0.084 Sum_probs=118.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCC-cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.+||+..|.-...-|+ -.+.+.+++.+.++... + +... .+..+....+++.+.....+ ..-+++.+ +++|++
T Consensus 90 ~ylD~~sg~~~~~lGh--~hp~v~~Av~~ql~~~~-~-~~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~f--~~SGsE 162 (504)
T PLN02760 90 KYLDALAGLWCTALGG--SEPRLVAAATEQLNKLP-F-YHSFWNRTTKPSLDLAKELLEMFTA-RKMGKVFF--TNSGSE 162 (504)
T ss_pred EEEEcCcCHHhcccCC--CCHHHHHHHHHHHhhcc-c-eecccccCcHHHHHHHHHHHhhcCC-CCCCEEEE--eCChHH
Confidence 7889877642222232 24556666655553311 1 1111 12233444455554332111 11246777 999999
Q ss_pred HHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHHH-hhCCCC------------eEEEecccCCCCC----------
Q 017967 163 SLRLAAALIERY----F-PG-AKVLISSPTWGNHKNIF-NDARVP------------WSEYRYYDPKTVG---------- 213 (363)
Q Consensus 163 al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~~-~~~G~~------------~~~v~~~~~~~~~---------- 213 (363)
|.+.+..+...+ . +| .+|+..+-+|.+..... ...|.. +..++......+.
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 242 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFS 242 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHH
Confidence 999986655433 1 33 57888888886653322 212211 1122210000000
Q ss_pred -CCHHHHHHHHHc-CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH
Q 017967 214 -LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (363)
Q Consensus 214 -~d~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (363)
...+.+++.+.. .++....+++-.-+.-.|.. .+.+-+++|.++|+++|+++|.||+..+|.-.+ .......+
T Consensus 243 ~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG---~~~a~e~~- 318 (504)
T PLN02760 243 TRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG---TMFGCDKY- 318 (504)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc---hhhHHHhc-
Confidence 012456666643 22334445443334444654 467889999999999999999999988884322 12222222
Q ss_pred hcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 291 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 291 ~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
.-.++ +-.|+|.+| .| +-+|.+ ++. ++
T Consensus 319 gv~PD---ivtlgK~lg-gG~~PigAv--~~~-~~ 346 (504)
T PLN02760 319 NIKPD---LVSLAKALS-SAYMPIGAV--LVS-PE 346 (504)
T ss_pred CCCCc---EEEeccccc-CCccccceE--eec-HH
Confidence 22233 466799998 56 478888 665 66
No 347
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.35 E-value=4.4e-05 Score=71.66 Aligned_cols=213 Identities=18% Similarity=0.243 Sum_probs=132.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC-----CCCCC-Ccch---HHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-----KEYLP-IEGL---AAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~Y~~-~~G~---~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
..|+|=.-++ +..+.|.++.-..+..... .+|.. ..-. +.|....|+-+++... -+
T Consensus 27 ~~ieLIASEN-------~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~-----an--- 91 (413)
T COG0112 27 EHIELIASEN-------FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY-----AN--- 91 (413)
T ss_pred hceeeeeccc-------cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCc-----cc---
Confidence 6788875443 3567888887665532222 23322 2212 2333333444444321 23
Q ss_pred EeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH---hhCC--CCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---NDAR--VPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
+|-.+|++|...+ ++.++.|||+|+-.+-...++...- ...| .+.+.|+++ .++..+|.|++++...+. +
T Consensus 92 VQPhSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd-~et~~IDyD~~~k~a~e~--k 166 (413)
T COG0112 92 VQPHSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVD-PETGLIDYDEVEKLAKEV--K 166 (413)
T ss_pred cCCCCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccc-cccCccCHHHHHHHHHHh--C
Confidence 3457788886666 6778899999999998887775433 2223 356777774 457899999999988863 4
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC-CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l 308 (363)
+++++..--..|- .-+++++.++|.+-|.++++|.+. .++.-++..+++.+ .--++..|-.|+|
T Consensus 167 PK~ii~G~SaY~r-----~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--------~AdvVTtTTHKTl-- 231 (413)
T COG0112 167 PKLIIAGGSAYSR-----PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--------HADVVTTTTHKTL-- 231 (413)
T ss_pred CCEEEECcccccc-----ccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--------ccceEeCCcccCC--
Confidence 5566644333332 235667777789999999999995 34443332211111 1346788899998
Q ss_pred ccccceEEEEeeCChhHHHHHHHHHHhhh
Q 017967 309 YAERIGAMNVVCSSSDLAARVKSQLKRLA 337 (363)
Q Consensus 309 ~G~RvG~i~~v~~~~~~~~~~~~~l~~~~ 337 (363)
.|=|-|.| .+.+++ +.+.+.+..
T Consensus 232 rGPrGG~I--l~~~ee----l~kkin~aV 254 (413)
T COG0112 232 RGPRGGII--LTNDEE----LAKKINSAV 254 (413)
T ss_pred CCCCceEE--EeccHH----HHHHhhhhc
Confidence 59999998 666556 666666543
No 348
>PRK07480 putative aminotransferase; Validated
Probab=98.35 E-value=7.4e-05 Score=73.96 Aligned_cols=253 Identities=12% Similarity=0.079 Sum_probs=128.2
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-C---CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~---~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (363)
+.+++ .+||+..|.-...-|+ -.+.+.+++.+.++... . ..| ......+|-+.+++.+- . .-+++.
T Consensus 46 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~~~~~~-~~~~~~~lae~L~~~~p----~--~~~~v~ 115 (456)
T PRK07480 46 DSEGN-KILDGMAGLWCVNVGY--GRKELADAAARQMRELPYYNTFFKT-THPPAIELAAKLAEVAP----P--GFNHVF 115 (456)
T ss_pred eCCCC-EEEEccchHHHhcCCC--CCHHHHHHHHHHHHhcCCccccccc-CCHHHHHHHHHHHHhCC----C--CcCEEE
Confidence 33443 7888876642111222 23455555555443211 0 112 22223344444444421 1 125787
Q ss_pred EEeccchhHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHH-HhhCCC------------CeEEEeccc--CCCC
Q 017967 154 TVQGLSGTGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYD--PKTV 212 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~--~~~~ 212 (363)
+ +.+|++|.+.+..+.+.+ . +| .+|+...-+|.+.... +...|. .+..++... ...+
T Consensus 116 f--~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 193 (456)
T PRK07480 116 F--TNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGG 193 (456)
T ss_pred E--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccccc
Confidence 7 999999999997765554 1 33 4677777777654321 111111 111122100 0000
Q ss_pred CCC--------HHHHHHHHHc-CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 213 GLD--------FEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 213 ~~d--------~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
..+ .+.+++.+.+ .++....+++-.-+.-.|.. .+.+-+++|.++|++||+++|.||+..+|.-.+ .
T Consensus 194 ~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~ 270 (456)
T PRK07480 194 DMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG---E 270 (456)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---c
Confidence 011 2556554532 22334455544434445664 456679999999999999999999998884322 1
Q ss_pred hhHHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChhHHHHHHHHHH----hhhccccCCCchHHHHHHhcccc
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK----RLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~~~~~~~~~l~----~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.+....+ .-.+++ -.|+|.++ .|+ -+|.+ ++. ++ +.+.+. ...-...++-++++..++...|+
T Consensus 271 ~~a~~~~-gv~PDi---v~~gK~l~-gG~~Pi~av--~~~-~~----i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 338 (456)
T PRK07480 271 WFGSQHF-GIKPDL---MTIAKGLT-SGYIPMGAV--GVG-DR----VAEVLIEEGGEFNHGFTYSGHPVAAAVALANLR 338 (456)
T ss_pred hhhhhhc-CCCCCe---eeeehhhc-cCCccceEE--EEc-HH----HHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 2222222 222343 35699998 674 78888 664 66 333331 11112233455566555544443
No 349
>PRK06105 aminotransferase; Provisional
Probab=98.32 E-value=0.00015 Score=71.95 Aligned_cols=225 Identities=13% Similarity=0.091 Sum_probs=118.7
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
+.+++ .+||+..|.-...-|+ -.+.+.+++.+.++... ...+ .......+|-+.+++.+ .. .-+++.+
T Consensus 44 D~dG~-~ylD~~~g~~~~~lGh--~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~----p~--~~~~v~f 114 (460)
T PRK06105 44 DDAGK-RYIEGMAGLWSVALGF--SEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMA----PV--PMSKVFF 114 (460)
T ss_pred ECCCC-EEEEcchhHHhccCCC--CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhC----CC--CCCEEEE
Confidence 33443 7889877742222222 24556666655553311 0111 01122233444444432 11 1257877
Q ss_pred EeccchhHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHHHH-hhCCC------------CeEEEecccCCCCC--
Q 017967 155 VQGLSGTGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKTVG-- 213 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~~~~~~~-- 213 (363)
+++|++|.+.+..+.... . +| .+|+...-+|.+..... ...|. .+..++..+...+.
T Consensus 115 --~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 192 (460)
T PRK06105 115 --TNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLP 192 (460)
T ss_pred --eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccC
Confidence 999999999986664333 1 23 46887777775553221 11111 11222221000000
Q ss_pred ---------CCHHHHHHHHHc-CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 214 ---------LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 214 ---------~d~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
...+.+++.+.. .+++...+++-.-+.--|.. .+.+-+++|.++|+++|+++|.||+..+|.-.+ .
T Consensus 193 ~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG---~ 269 (460)
T PRK06105 193 GESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG---N 269 (460)
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc---h
Confidence 013567777643 22334444443334444655 578889999999999999999999998884322 1
Q ss_pred hhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChh
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSD 324 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~ 324 (363)
.+....+ +-.+++ -.|+|.++ .| +-+|.+ ++. ++
T Consensus 270 ~f~~~~~-~v~PDi---~~~gK~lg-gG~~P~~av--~~~-~~ 304 (460)
T PRK06105 270 MFGCETF-GIKPDI---LVMSKQLS-SSYQPLSAV--LMN-EK 304 (460)
T ss_pred hhhHHhc-CCCCCe---eeeecccc-cCcccceEE--EEc-HH
Confidence 2222222 222333 36799998 56 578888 664 66
No 350
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.28 E-value=0.00024 Score=70.41 Aligned_cols=257 Identities=14% Similarity=0.087 Sum_probs=128.2
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC-CcEEEEe
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQ 156 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~ 156 (363)
..+++ .+||+..|.-...-|+ -.|.+.+++.+.+........ ..-..+.+..+|+.+.......... ..+++
T Consensus 54 D~dG~-~ylD~~~g~~~~~lGH--~~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~-- 126 (459)
T PRK06931 54 DVEGN-QYLDCLAGAGTLALGH--NHPDVLQSIQDVLTSGLPLHT--LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFT-- 126 (459)
T ss_pred eCCCC-EEEEcccchhhccCCC--CCHHHHHHHHHHHhhhccccc--cccCCHHHHHHHHHHHHhCCCccccceEEEe--
Confidence 34443 7888877743222222 234566666555432110111 0011234444555543322100000 12233
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC------------CCeEEEecccCCC--CC----CCHH
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKT--VG----LDFE 217 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~~~~~--~~----~d~~ 217 (363)
+++|++|.+.+..+.+.+....+|+...-+|.+....... .| -.+..+|..+... ++ -+.+
T Consensus 127 ~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (459)
T PRK06931 127 GPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVK 206 (459)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 6899999999977665554446788888888666433321 11 1122333211100 11 0122
Q ss_pred HH----HHHHHc---CCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 218 GM----IADIKA---APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 218 ~l----~~~l~~---~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
.+ ++.+.. .+++...+++-.-+--.|. ..+.+-++++-++|+++|+++|.||+..+|.-.+ ..+....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG---~~~a~~~~ 283 (459)
T PRK06931 207 ALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG---KMFAFEHA 283 (459)
T ss_pred HHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc---hHHHhhhc
Confidence 22 333321 1223444444222333354 4578889999999999999999999998884322 12222222
Q ss_pred HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.-.+++++ ++|.++ .|+-+|.+ +.. ++ + +.+........++-++++..++...|+
T Consensus 284 -gv~PDivt---~gK~l~-gG~Pi~av--~~~-~~-~----~~~~~~~~~~T~~gnpla~aaala~L~ 338 (459)
T PRK06931 284 -GIEPDIIV---MSKAVG-GGLPLAVL--GIK-KE-F----DAWQPGGHTGTFRGNQLAMATGLTTLK 338 (459)
T ss_pred -CCCCCEEE---eccccc-CCcceeee--eeH-HH-H----hhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 22344443 499998 78999977 443 43 2 222211122233455666555544443
No 351
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.26 E-value=5.1e-05 Score=80.89 Aligned_cols=172 Identities=15% Similarity=0.147 Sum_probs=108.3
Q ss_pred cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--CCCC----EEEEcCCCCcchHHHHhhCCC
Q 017967 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPGA----KVLISSPTWGNHKNIFNDARV 199 (363)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~~gd----~Vlv~~P~y~~~~~~~~~~G~ 199 (363)
+|..++...+.+++....|. +++.+ +.+||+++........+.+ .+|| +|++++-.+......+...|+
T Consensus 538 qG~l~~i~e~q~~l~eltG~----d~~sl-~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~ 612 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGY----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM 612 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCC----CCEEE-CccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC
Confidence 45555555555555444443 35544 3445555543332122222 3665 599999999888888899999
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++++ .++.+|+++|++.+.++..+.+++++.+|++- |.. .+++++|+++|+++|+++++|.++..-... .
T Consensus 613 ~vv~v~~d--~~G~iD~~~L~~~i~~~~~~la~V~it~pst~-G~~--e~~I~eI~~i~h~~G~~v~VDgA~~~al~~-l 686 (954)
T PRK05367 613 KVVVVACD--ENGNIDLDDLRAKAEEHADNLAAIMITYPSTH-GVF--EETIREICEIVHEHGGQVYLDGANMNAQVG-L 686 (954)
T ss_pred EEEEECCC--CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCC-eee--cCCHHHHHHHHHHcCCEEEEECcChhhccC-C
Confidence 99999984 35789999999999754334666666676654 322 245788888899999999999997422111 0
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccc----ccccceEE
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGL----YAERIGAM 316 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l----~G~RvG~i 316 (363)
. .. .+.+- .++..|..|.|+. .|=-+|.+
T Consensus 687 ~----~p---g~~GA-Di~~~s~HK~f~~P~G~GGPg~G~l 719 (954)
T PRK05367 687 A----RP---GDIGA-DVSHLNLHKTFCIPHGGGGPGVGPI 719 (954)
T ss_pred C----Ch---hhcCC-CEEEecCcccCCCCcCCCCCceEEE
Confidence 0 00 12222 3667778898642 23446777
No 352
>PRK06149 hypothetical protein; Provisional
Probab=98.24 E-value=0.00016 Score=78.12 Aligned_cols=246 Identities=13% Similarity=0.073 Sum_probs=127.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.. .-|+ -.+.|.+++.+.+.... ...| ......+|.+.+++.+-. .-+.+.+ +++|++
T Consensus 586 ~ylD~~~~~~--~lGh--~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~p~------~~~~v~f--~~SGsE 652 (972)
T PRK06149 586 SYLDMVNNVT--VLGH--GHPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALAPD------GLDTVFL--VNSGSE 652 (972)
T ss_pred EEEECCCCcc--ccCC--CCHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhCCC------CcCEEEE--eCCchH
Confidence 6888876542 1222 23455555554443211 1112 122334555555555311 1257777 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-h-------CCC------CeEEEecccCC--CCC-CC-----HHHHH
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D-------ARV------PWSEYRYYDPK--TVG-LD-----FEGMI 220 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~-------~G~------~~~~v~~~~~~--~~~-~d-----~~~l~ 220 (363)
|.+.+..+...+....+|+...-+|.+...... . .+. .+..++..+.. .+. .+ .+.++
T Consensus 653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~ 732 (972)
T PRK06149 653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV 732 (972)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence 999997665555444678877777765431110 0 000 11222211000 011 11 23444
Q ss_pred HHHH---cCCCCcEEEEEcC-CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE
Q 017967 221 ADIK---AAPGGSFILLHGC-AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (363)
Q Consensus 221 ~~l~---~~~~~~~~~~i~~-p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v 296 (363)
+.++ ...++...+++-. .++--....+.+-+++|.++|+++|+++|.||+..+|.-.+ ...+.+..+ .-.+++
T Consensus 733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~~~a~e~~-gv~PDi 809 (972)
T PRK06149 733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HYFWGFEQQ-GVVPDI 809 (972)
T ss_pred HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--ccchhhhhc-CCCCCE
Confidence 4333 2223343444322 24433355677889999999999999999999987874332 112222222 222344
Q ss_pred EEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHh--hhccccCCCchHHHHHHhcccc
Q 017967 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR--LARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 297 i~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~--~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ +|+|.+| .|+-+|.+ ++. ++ +.+.+.. ....++ +-++++-.++...|+
T Consensus 810 v---t~gK~lg-~G~Pl~av--~~~-~~----i~~~~~~~~~~~sT~-~gnP~~~aaala~L~ 860 (972)
T PRK06149 810 I---TMAKGMG-NGHPLGAV--ITR-RE----IAEALEAEGYFFSST-GGSPVSCRIGMAVLD 860 (972)
T ss_pred E---Eeccccc-CCeeeEEE--EEc-HH----HHhhhccCCcccCCC-CCCHHHHHHHHHHHH
Confidence 4 7799998 78889999 665 56 4444432 111222 445555555544443
No 353
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.21 E-value=0.0001 Score=74.76 Aligned_cols=164 Identities=9% Similarity=0.015 Sum_probs=108.4
Q ss_pred HHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC--C------
Q 017967 105 VVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--P------ 176 (363)
Q Consensus 105 ~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~--~------ 176 (363)
.+...+..+..+. ...|....+...+.+.+.+++.+..|.+- .+.+ + |.|||.|...+..+.+... |
T Consensus 99 ila~~~a~~~N~n-~~~~e~SP~~t~lE~~vi~~la~l~G~~~-~~G~-~--TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 99 ILAYNYAMLWNGN-NVAYESSPATSQMEEEVGKEFATLMGYKN-GWGH-I--VADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred HHHHHHHHHhCCC-CCccccCchHHHHHHHHHHHHHHHhCCCC-CCeE-E--eCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 3334444444332 24454555667788888887766655432 2333 3 7999998765532221110 1
Q ss_pred ------------------------------------------C------CEEEEcCCCCcchHHHHhhCCC---CeEEEe
Q 017967 177 ------------------------------------------G------AKVLISSPTWGNHKNIFNDARV---PWSEYR 205 (363)
Q Consensus 177 ------------------------------------------g------d~Vlv~~P~y~~~~~~~~~~G~---~~~~v~ 205 (363)
| -+|+++.-.+..+...+...|+ +++.||
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vp 253 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVP 253 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEee
Confidence 0 0578888878888889998998 589999
Q ss_pred cccCCCCCCCHHHHHHHHHc---CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCC--eEEEecCCCCCc
Q 017967 206 YYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH--IPFFDVAYQGFA 275 (363)
Q Consensus 206 ~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~--~ii~De~y~~~~ 275 (363)
++ +++.+|++.|++.+.+ ....+..++-+-+.-.+|.+=+.+++.+|.+.++++|+ ++-+|.+|.++.
T Consensus 254 vD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 254 VD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred cC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence 84 4689999999998864 22234445556678889988666666666655588897 699999999863
No 354
>PRK06148 hypothetical protein; Provisional
Probab=98.20 E-value=0.0002 Score=77.44 Aligned_cols=246 Identities=13% Similarity=0.054 Sum_probs=127.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.. .-|+ -.+.|.+++.+.+... ....| ......+|-+.+++.+- . .-+.+.+ +++|++
T Consensus 625 ~ylD~~~g~~--~lGH--~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~~lAe~L~~~~p----~--~~~~v~f--~nSGsE 691 (1013)
T PRK06148 625 AYLDCFNNVC--HVGH--AHPRVVAAAARQAARLNTNTRY-LHDAIVAYAERLTATLP----D--GLTVAFF--VNSGSE 691 (1013)
T ss_pred EEEEcccChh--hcCC--CCHHHHHHHHHHHhhcCCcCCc-CCHHHHHHHHHHHHhCC----C--CcCEEEE--eCCcHH
Confidence 6777766542 1222 2455666655544321 11223 22233444444444421 1 1256777 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhC--------C----CCeEEEeccc--CCCCCC-C-------HHHH
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDA--------R----VPWSEYRYYD--PKTVGL-D-------FEGM 219 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~--------G----~~~~~v~~~~--~~~~~~-d-------~~~l 219 (363)
|.+.+..+.+.+....+|+...-+|.+..... ... + -.+..++..+ ...++. + .+.+
T Consensus 692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 771 (1013)
T PRK06148 692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV 771 (1013)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence 99999776655544467888888776553211 111 1 0111111100 001111 1 1345
Q ss_pred HHHHH---cCCCCcEEEEEcCCCCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe
Q 017967 220 IADIK---AAPGGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (363)
Q Consensus 220 ~~~l~---~~~~~~~~~~i~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 295 (363)
++.+. ..++....+++-.-+---| ...+.+-++++.++|+++|+++|.||+..+|.-.+. ..+....+ +-.++
T Consensus 772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~--~~~a~e~~-gv~PD 848 (1013)
T PRK06148 772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS--HWWAFETQ-GVVPD 848 (1013)
T ss_pred HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC--cchhhhhc-CCCcc
Confidence 55443 2223344444332222224 356788899999999999999999999988843221 12222222 22234
Q ss_pred EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhh-ccccCCCchHHHHHHhccc
Q 017967 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA-RPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 296 vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~-~~~~~~~s~~~q~~~~~~l 356 (363)
+ -.|+|.+| .|+-+|.+ ++. ++ +.+.+..-. -...++-++++-.++...|
T Consensus 849 i---vt~gK~lg-gG~Plgav--~~~-~e----i~~~~~~g~~~~~Tf~gnpla~aaa~a~L 899 (1013)
T PRK06148 849 I---VTMGKPIG-NGHPMGAV--VTT-RE----IADSFDNGMEYFNTFGGNPVSCAIGLAVL 899 (1013)
T ss_pred e---eeeccccc-CCcceEEE--EEc-HH----HHhhccCCCccccCCCCCHHHHHHHHHHH
Confidence 4 34599998 89999999 665 66 444433211 1123344555555444433
No 355
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.17 E-value=0.0004 Score=65.89 Aligned_cols=220 Identities=17% Similarity=0.095 Sum_probs=132.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHH-HHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK-VTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~-aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.+||++--.-.+..|-..+.+.+.++...+........|.-..|...-|- .+++.+.+-. ..+.+++ ++..+.
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~----~aea~~i--vnnn~a 94 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLT----GAEAAAI--VNNNAA 94 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhccc----chhheee--ECCcHH
Confidence 45555432222334445566777777777765544455644444433332 3344432321 1345555 677777
Q ss_pred HHHHHHHHHHHhCCCCEEEEcC-----CCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 163 SLRLAAALIERYFPGAKVLISS-----PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~-----P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
|+.++ +..+.++..|++.. ++-++...+++..|++++++-. .......+++.++.+ +...++-+.+
T Consensus 95 AVll~---~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~----tn~t~~~d~~~AIne--~ta~llkV~s 165 (395)
T COG1921 95 AVLLT---LNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT----TNRTHLKDYELAINE--NTALLLKVHS 165 (395)
T ss_pred HHHHH---HhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc----cCcCCHHHHHHHhcc--CCeeEEEEee
Confidence 76666 33444454444332 5778889999999999999964 234678899999985 3344444445
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
+|.+--..++. ++++++|+++|+++++|.+-...... .+..+.++..+. .++++|--|.+| |-|-|.+
T Consensus 166 ~~~~f~~~l~~---~~l~~ia~~~~lpvivD~aSg~~v~~-----e~~l~~~la~Ga-DLV~~SgdKllg--GPqaGii- 233 (395)
T COG1921 166 SNYGFTGMLSE---EELVEIAHEKGLPVIVDLASGALVDK-----EPDLREALALGA-DLVSFSGDKLLG--GPQAGII- 233 (395)
T ss_pred ccccccccccH---HHHHHHHHHcCCCEEEecCCcccccc-----ccchhHHHhcCC-CEEEEecchhcC--CCccceE-
Confidence 55433334444 45666799999999999995444321 224444444443 356778899987 8888988
Q ss_pred EeeCChhHHHHHHHH
Q 017967 318 VVCSSSDLAARVKSQ 332 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~ 332 (363)
++ .+++++++.++
T Consensus 234 -~G-kKelI~~lq~~ 246 (395)
T COG1921 234 -VG-KKELIEKLQSH 246 (395)
T ss_pred -ec-hHHHHHHHHhh
Confidence 55 58866665554
No 356
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=98.14 E-value=0.00024 Score=66.71 Aligned_cols=175 Identities=15% Similarity=0.213 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecc
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY 207 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 207 (363)
.-+|.+.+|++ .++ +.-+++..+-.++.+ ....+....||-.|+-.+-.....+.-++..|++-..+.
T Consensus 218 hv~LE~eLA~L-HqK------~aALlFsSCfVANDs---tLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFr-- 285 (570)
T KOG1360|consen 218 HVRLEAELADL-HQK------EAALLFSSCFVANDS---TLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFR-- 285 (570)
T ss_pred hhhHHHHHHHH-hcC------cceeeeeeeeeccch---HHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeec--
Confidence 35788888887 343 233333112223333 211244455887777666555555655666666544443
Q ss_pred cCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC---Cch
Q 017967 208 DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD---NDA 283 (363)
Q Consensus 208 ~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~---~~~ 283 (363)
.-|++.|++.++..+ ..++++-.-..|.=+|.+-+. ++|.+++.+||.+.++||+..--.|++.- .+.
T Consensus 286 -----HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcpl---eelcDvah~yGAiTFlDEVHAVGlYG~rGaGvger 357 (570)
T KOG1360|consen 286 -----HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPL---EELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGER 357 (570)
T ss_pred -----cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCH---HHHHHHHHHhCceeeeehhhhhccccCCCCCcccc
Confidence 247899999888733 456777778889999988765 55778899999999999996533333210 001
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhh
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA 337 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~ 337 (363)
..+ ...-.|+.+++.|.||+-| ||| +.... +++.++.+.
T Consensus 358 dGv-----m~kvDiIsGTLgKafGcVG---GYI---Aat~~----LvDmiRSyA 396 (570)
T KOG1360|consen 358 DGV-----MHKVDIISGTLGKAFGCVG---GYI---AATRK----LVDMIRSYA 396 (570)
T ss_pred CCc-----chhhhhcccchhhhccccc---cee---hhhhh----HHHHHHHhc
Confidence 111 1123477899999999877 888 55566 555555444
No 357
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.13 E-value=5.5e-05 Score=72.63 Aligned_cols=175 Identities=10% Similarity=-0.074 Sum_probs=102.4
Q ss_pred CCccccHHHHHHHHHHHccCC-CCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEec-cchhHHHHHHHHHHHH
Q 017967 98 LQPYVLDVVKKAENLMLERGE-NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGTGSLRLAAALIER 173 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~-~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t-~ggt~al~l~~~l~~~ 173 (363)
|+..+++.+.+++.+....-. ..++.+ ..-..+.|+.+++++... ++.+|++ + .+||.+++.+ +..+
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~-----~~~~v~f--~~gs~T~a~~~~--~~~l 80 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLP-----DGYEVIL--GNGGATAFWDAA--TFGL 80 (361)
T ss_pred CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCC-----CCceEEE--ECCchhHHHHHH--HHhc
Confidence 556678888888654210000 012222 234567788888886542 1346655 5 5599999988 4444
Q ss_pred hCCCCEEEEcCCCCc-chHHHHhhC--CCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHH
Q 017967 174 YFPGAKVLISSPTWG-NHKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 250 (363)
Q Consensus 174 ~~~gd~Vlv~~P~y~-~~~~~~~~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~ 250 (363)
+.+ +.+.+..-.|. .+...++.. +.++..++.. ++..++. .+. ++++++.+++..|.||...+.++
T Consensus 81 ~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~pi~~ 149 (361)
T TIGR01366 81 IEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTAD--PGSAPEP-----QAD---PGVDVIAWAHNETSTGVAVPVRR 149 (361)
T ss_pred ccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecC--CCCCCCC-----ccC---CCCCEEEEcccCCccceeccccc
Confidence 432 33333333332 334444432 2266666652 2223332 122 35678888999999999999766
Q ss_pred HHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 251 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 251 ~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
+ ++++|+++|+|.+ +.+..... .+. . -.+++.|--|.+|.+|
T Consensus 150 I------~~~~g~~~iVDav-qs~g~~~i-----dv~----~--~D~~~~s~~K~lg~~~ 191 (361)
T TIGR01366 150 P------EGSDDALVVIDAT-SGAGGLPV-----DIA----E--TDVYYFAPQKNFASDG 191 (361)
T ss_pred c------cccCCCeEEEEcC-ccccCCCC-----CHH----H--CCEEEEEchhhcCCCC
Confidence 4 5789999999999 55443321 111 1 2357788899999875
No 358
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.11 E-value=0.00013 Score=76.71 Aligned_cols=178 Identities=17% Similarity=0.125 Sum_probs=109.9
Q ss_pred CCCCC---CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--CCC----CEEEEcCCCCcch
Q 017967 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG----AKVLISSPTWGNH 190 (363)
Q Consensus 120 ~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~~g----d~Vlv~~P~y~~~ 190 (363)
+-|.| .+|.-++...+.+++....|. +.+ .++-.+|+.+-......++.+ .+| ++|+|+.-.+...
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~-Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN 604 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAI-CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN 604 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeE-eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC
Confidence 45666 677766666655555443333 222 233445555543332223322 122 5788888777554
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
...+...|++++.++++ .++.+|+++|++.+.+...+.+.+.+.+|++=. ++ .+++++|.++++++|..+++|.+
T Consensus 605 pasa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~G--v~-e~~V~eI~~iah~~Galv~vDgA 679 (954)
T PRK12566 605 PASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHG--VY-EEGIREICEVVHQHGGQVYMDGA 679 (954)
T ss_pred HHHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCc--ee-cchHHHHHHHHHHcCCEEEEEee
Confidence 55678899999999985 357899999999997544556667666665443 33 56789999999999999999999
Q ss_pred CCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc----ccccceEE
Q 017967 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL----YAERIGAM 316 (363)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l----~G~RvG~i 316 (363)
.. ....... .. ....-.++..++.|.|+. .|.-+|.+
T Consensus 680 ~~-~a~~~l~----~P----g~~GADi~~~s~HKtf~~P~G~GGP~vG~i 720 (954)
T PRK12566 680 NL-NAQVGLA----RP----ADIGADVSHMNLHKTFCIPHGGGGPGMGPI 720 (954)
T ss_pred Ch-hhccCCC----Ch----hhcCCCEEEecCCcccCcCccCCCCccchh
Confidence 53 2211110 11 112345778888887752 24445655
No 359
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.05 E-value=0.00046 Score=68.12 Aligned_cols=149 Identities=12% Similarity=0.087 Sum_probs=85.8
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhC------CC------CEEEEcCCCCcchHHHHh-hCCCCe-----------EEEe
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYF------PG------AKVLISSPTWGNHKNIFN-DARVPW-----------SEYR 205 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~------~g------d~Vlv~~P~y~~~~~~~~-~~G~~~-----------~~v~ 205 (363)
+++.+ +++|++|.+.+..+...+. .| .+|+...-+|.+....+. ..|... ..++
T Consensus 111 ~~v~f--~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 188 (443)
T PRK08297 111 PHLFF--VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 188 (443)
T ss_pred CEEEE--eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccC
Confidence 68877 9999999999976654331 12 568888888866543222 211100 0011
Q ss_pred ccc---C-CCCC---------CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 206 YYD---P-KTVG---------LDFEGMIADIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 206 ~~~---~-~~~~---------~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
... + .... -+++.+++.+.+.++....+++-.-+---|. ..+.+-+++|.++|++||+++|.||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 268 (443)
T PRK08297 189 NPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQ 268 (443)
T ss_pred CCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 000 0 0000 0245566667654444555554333333354 477899999999999999999999999
Q ss_pred CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 272 QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
.+|...+ ..+....+ +-.++++ .|+|.++
T Consensus 269 tGfGRtG---~~~a~~~~-gv~PDiv---~~gK~l~ 297 (443)
T PRK08297 269 TGVGLTG---TAWAYQQL-GVRPDIV---AFGKKTQ 297 (443)
T ss_pred hccCccc---hHHHHHhc-CCCCCEE---Eeccccc
Confidence 9885432 12222222 2234444 3689874
No 360
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.00 E-value=0.00019 Score=69.06 Aligned_cols=141 Identities=17% Similarity=0.200 Sum_probs=92.2
Q ss_pred EeccchhHHHHHHHHHHHHh-CCCCEEEEcCCCCcch-H-HHHhhCCC-CeEEEecccCCCCCCCHHHHHHHHHcCCCCc
Q 017967 155 VQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNH-K-NIFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~-~-~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (363)
..+.+||++++.+ +.+++ .+||+|++.. .|+.- . ++++..|+ ++..+.. +.+..+++++++. . +.
T Consensus 62 ~l~GsGT~a~Eaa--~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~--~----~~ 130 (374)
T TIGR01365 62 IVPASDTGAVEMA--LWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF--K----ND 130 (374)
T ss_pred EECCchHHHHHHH--HHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC--C----CC
Confidence 3489999999988 67777 4899999876 55433 4 78889999 4777764 4567889998873 1 22
Q ss_pred EEEEEcCCCCCCCCCCCHHHHHHHHHHHHh-cCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
+ ++++....||+..+.+ ++ +++ ++.++|+|.+ +.+...+. .+ + .-.+++.|--|.+++|
T Consensus 131 -v-~~vhnETSTGv~npv~---~i---~~~~~~~lliVDav-Ss~g~~~l-----~~----d--~iDv~~tgsQK~L~~p 190 (374)
T TIGR01365 131 -V-VFTWNGTTSGVRVPNG---DF---IPADREGLTICDAT-SAAFAQDL-----DY----H--KLDVVTFSWQKVLGGE 190 (374)
T ss_pred -E-EEecCCCchheecccc---cc---ccccCCCcEEEEcc-chhcCCCC-----Ch----h--HCcEEEEechhccCCC
Confidence 2 3455556789988764 33 333 5899999999 44443321 11 1 1335566669999886
Q ss_pred cccceEEEEeeCChhHHHHHH
Q 017967 310 AERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~ 330 (363)
+- ++++ +.+ ++.+++..
T Consensus 191 pG-ls~v--~vs-~~Al~~~~ 207 (374)
T TIGR01365 191 GA-HGML--ILS-PRAVARLE 207 (374)
T ss_pred Cc-eEEE--EEC-HHHHHHHh
Confidence 53 4555 554 66555443
No 361
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.97 E-value=0.00052 Score=73.37 Aligned_cols=186 Identities=10% Similarity=0.060 Sum_probs=113.8
Q ss_pred EeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCc-----ch----HHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----GL----AAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-----G~----~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
-++.|.|. .+.+..+.+.+.. .++....|.|.+ |. .+++..++++..- +..++.+ +
T Consensus 80 ~ig~G~y~-----~~~P~vi~~~i~~--~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~------~~anaSl--~ 144 (954)
T PRK05367 80 YIGQGYYG-----THTPPVILRNILE--NPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGL------EIANASL--L 144 (954)
T ss_pred ccCCCCCC-----CcCcHHHHHHHHh--CcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCC------Chhhccc--c
Confidence 46777773 2445555443322 234446677643 43 3456666776422 2577766 8
Q ss_pred cchhHHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHH----hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
.++|.+.+.+...+. ..+ +++|+|++-.|+.....+ +..|++++.++..+ |.+ . ++..
T Consensus 145 d~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~------~---~~~~ 208 (954)
T PRK05367 145 DEATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD------H---DDVF 208 (954)
T ss_pred ccHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC------c---ccEE
Confidence 899999887743332 345 489999999998887654 56899999998732 111 1 2344
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc-----c
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-----L 306 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~-----~ 306 (363)
.+++.+| |-+|... ++++|++.|+++|.++++|-.-..+.-.. +. .+.+ -.|++++.-|. |
T Consensus 209 ~vlvq~p-~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l~------~p---ge~G-aDi~vgs~qkfg~P~g~ 274 (954)
T PRK05367 209 GVLLQYP-GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLLT------PP---GEMG-ADIAVGSAQRFGVPMGF 274 (954)
T ss_pred EEEEecC-CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCCC------Ch---hhcC-CCEEEeeCcccCCCCCC
Confidence 5555565 7899987 47788888999999999986432222210 11 1222 23555555675 5
Q ss_pred ccccccceEEEEeeC
Q 017967 307 GLYAERIGAMNVVCS 321 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~ 321 (363)
|-|| .|++ .+.
T Consensus 275 GGP~--aGfl--avr 285 (954)
T PRK05367 275 GGPH--AAYF--AVR 285 (954)
T ss_pred CCCC--EEEE--EEC
Confidence 5454 7888 554
No 362
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=97.88 E-value=0.00027 Score=63.85 Aligned_cols=212 Identities=14% Similarity=0.034 Sum_probs=116.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHcc--------CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--------~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
..++||..+.|.....+ |.+.++....++. ....+| ..-+..|...+|+| .++ ++.++
T Consensus 67 k~ilnFcaNnYLGLssh----Peii~a~~~aleeyGaGlssvrfIcGt--q~iHk~LE~kiAqf-h~r-------ED~il 132 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSH----PEIINAGQKALEEYGAGLSSVRFICGT--QDIHKLLESKIAQF-HGR-------EDTIL 132 (417)
T ss_pred cceeeecccccccccCC----hHHHHHHHHHHHHhCCCccceeEEecc--hHHHHHHHHHHHHH-hCC-------CceEE
Confidence 37889998887544333 3444444444421 011122 12346677788888 343 33333
Q ss_pred EeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC-CcEEE
Q 017967 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG-GSFIL 233 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~~~~~ 233 (363)
.+.+-.|..-+ +-.++.|.|.|+-.+........-++.. . . -...|+-.++..+.++.+ +-+++
T Consensus 133 --ypscfdANag~--feail~pedAvfSDeLNhASIIdGirLc-----k-r-----y~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 133 --YPSCFDANAGA--FEAILTPEDAVFSDELNHASIIDGIRLC-----K-R-----YRHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred --eccccccchHH--HHHhcChhhhhhccccccchhhhhhHHH-----h-h-----hccchhHHHHHHHHHhhhheEEEE
Confidence 46555553223 4445667777776554443333222211 1 1 124566667766554332 33344
Q ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCcccccccccc
Q 017967 234 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAER 312 (363)
Q Consensus 234 ~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~R 312 (363)
+.-..-.=.|-..+ +++|.+++++||.++++||+..-+.++.. .....+.. -.++-.++.++++|.+| |.-
T Consensus 198 ~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~t---GrGt~E~~~vm~~vdiinsTLgKAlG--ga~ 269 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGET---GRGTAEEFGVMGDVDIINSTLGKALG--GAS 269 (417)
T ss_pred EecceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCC---CCChHHHhCCCCcceehhhhhhhhhc--CCC
Confidence 43333344566655 55566779999999999999877766531 11222222 24566777889999997 555
Q ss_pred ceEEEEeeCChhHHHHHHHHHHhhhc
Q 017967 313 IGAMNVVCSSSDLAARVKSQLKRLAR 338 (363)
Q Consensus 313 vG~i~~v~~~~~~~~~~~~~l~~~~~ 338 (363)
-||. .+| +. +++-++.-.+
T Consensus 270 GGyt--tgp-~~----li~llrqr~R 288 (417)
T KOG1359|consen 270 GGYT--TGP-KP----LISLLRQRSR 288 (417)
T ss_pred CCCc--cCC-hh----HHHHHHhcCC
Confidence 6999 565 55 4554544443
No 363
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.83 E-value=0.00039 Score=66.07 Aligned_cols=139 Identities=16% Similarity=0.175 Sum_probs=100.7
Q ss_pred CCCCC---CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC--CC----CEEEEcCCCCcch
Q 017967 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PG----AKVLISSPTWGNH 190 (363)
Q Consensus 120 ~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~--~g----d~Vlv~~P~y~~~ 190 (363)
+-|.| .+|..++...+.+||....|. +.|.+ |-+.|.++-.....++..+. .| +.|+||+-.+...
T Consensus 96 HP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsL-QP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 96 HPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeec-cCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 44544 568888888899998665544 34433 44444444333322333332 34 5799999999999
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
...+...|.+|+.|+++ +++.+|+++|++++. ++...+.++||| ..-+=++.+++|+++..++|-.+..|.+
T Consensus 171 PASAam~G~~VV~V~~~--~~G~VDlddLk~k~~---~~~AalMiTnPs---T~GvFE~~I~ei~~ivH~~Gg~vY~DGA 242 (496)
T COG1003 171 PASAAMAGFKVVVVKCD--ENGNVDLDDLRAKAE---DNLAALMITNPS---TLGVFEEDIREICEIVHEAGGQVYYDGA 242 (496)
T ss_pred hhhHhhcCceEEEEecC--CCCCccHHHHHHHhc---cceeEEEeccCc---ccccchhhHHHHHHHHHHcCCEEEecCc
Confidence 99999999999999994 568899999999988 345555556553 3334478999999999999999999988
Q ss_pred C
Q 017967 271 Y 271 (363)
Q Consensus 271 y 271 (363)
-
T Consensus 243 N 243 (496)
T COG1003 243 N 243 (496)
T ss_pred c
Confidence 4
No 364
>PLN02452 phosphoserine transaminase
Probab=97.79 E-value=0.0011 Score=63.69 Aligned_cols=199 Identities=12% Similarity=0.027 Sum_probs=108.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHH-ccC-------CCCCCCCC--cchHHHHHHHHHHHhcCCCCcccCCcEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERG-------ENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~~-------~~~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (363)
.+++|+. |+..+++.|.+++.+.+ +-. ...++.+. .-..+.++.+.+++ +.+ +..+|+
T Consensus 7 ~~~~f~p-------GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~----~~p-~~y~v~ 74 (365)
T PLN02452 7 RVFNFSA-------GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELL----DIP-DNYEVL 74 (365)
T ss_pred ceEeeeC-------CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHh----CCC-CCceEE
Confidence 4677774 44667778887776543 100 00112111 12233444444443 221 012343
Q ss_pred EEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcch--HHHHhhCCCCeEEEecc-cCCCCCCCHHHHHHHHHcCCCCc
Q 017967 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~ 230 (363)
+ ...|||++++.+ +.+++.+||++++..-+..+- ...+++.|...+..... .....-++++++ +..+ ..
T Consensus 75 ~-l~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~ 146 (365)
T PLN02452 75 F-LQGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTP-DA 146 (365)
T ss_pred E-EeCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCC-CC
Confidence 3 478899998888 677778999988887666443 44667888744444221 111124566654 2222 34
Q ss_pred EEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
..+.+++....||+.+. ++.++. ++++|+|.+ +.+...+. .+.. -.+++ .|--|.+|.+|
T Consensus 147 ~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~-Ss~g~~pi-----dv~~-----~~v~~-~saqK~lGP~G 206 (365)
T PLN02452 147 KFVHICANETIHGVEFK--DYPDVG------NVPLVADMS-SNFLSKPV-----DVSK-----YGVIY-AGAQKNVGPSG 206 (365)
T ss_pred cEEEECCCCCCCcEecC--cccccC------CCeEEEECC-ccccCccc-----CHHH-----cCEEE-EecccccCCCC
Confidence 45665666678898643 233332 379999999 55443321 2211 13444 58899999998
Q ss_pred ccceEEEEeeCChhHHH
Q 017967 311 ERIGAMNVVCSSSDLAA 327 (363)
Q Consensus 311 ~RvG~i~~v~~~~~~~~ 327 (363)
+|.+ +.. ++.++
T Consensus 207 --l~~v--~vr-~~~l~ 218 (365)
T PLN02452 207 --VTIV--IIR-KDLIG 218 (365)
T ss_pred --eEEE--EEc-HHHHh
Confidence 4777 554 55433
No 365
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.79 E-value=0.0035 Score=61.72 Aligned_cols=126 Identities=12% Similarity=0.074 Sum_probs=77.9
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhC------C------CCEEEEcCCCCcchHHHHh-hCCCC-eE------------E
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYF------P------GAKVLISSPTWGNHKNIFN-DARVP-WS------------E 203 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~------~------gd~Vlv~~P~y~~~~~~~~-~~G~~-~~------------~ 203 (363)
+++.+ +++|++|.+.+..+...+. . +.+|+...-+|.+...... ..|.. .. .
T Consensus 104 ~~v~f--~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 181 (431)
T TIGR03251 104 PHLFF--IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 181 (431)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCC
Confidence 57777 9999999999876655441 1 3678888888866543221 11211 00 0
Q ss_pred Eecc----cCCCCC-------CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 204 YRYY----DPKTVG-------LDFEGMIADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 204 v~~~----~~~~~~-------~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
.|.. +..... -+++.+++.+...++....+++-.-+.-.|.. .+.+-+++|.++|++||+++|+||++
T Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 182 NPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred CCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 1100 000000 12445555665444555666655555556654 57899999999999999999999999
Q ss_pred CCCcCC
Q 017967 272 QGFASG 277 (363)
Q Consensus 272 ~~~~~~ 277 (363)
.+|...
T Consensus 262 tG~Grt 267 (431)
T TIGR03251 262 TGVGLT 267 (431)
T ss_pred hccCcc
Confidence 988654
No 366
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.70 E-value=0.0061 Score=60.36 Aligned_cols=125 Identities=19% Similarity=0.228 Sum_probs=77.7
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhC------------------------CC---CEEEEcCCCCcchHHHHh-hCCC--
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYF------------------------PG---AKVLISSPTWGNHKNIFN-DARV-- 199 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~------------------------~g---d~Vlv~~P~y~~~~~~~~-~~G~-- 199 (363)
+++.+ +++|++|.+.+..+...+. +| .+|+...-+|.+...... ..|-
T Consensus 123 ~~v~f--~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~ 200 (464)
T TIGR00699 123 DQVWT--GMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKP 200 (464)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcc
Confidence 57877 9999999999976654331 11 268888888866533221 1111
Q ss_pred ---------CeEEEecccCC-CC-----------CCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHH
Q 017967 200 ---------PWSEYRYYDPK-TV-----------GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADV 257 (363)
Q Consensus 200 ---------~~~~v~~~~~~-~~-----------~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~ 257 (363)
.+..+|..... .+ .-+++.+++.+...+.....+++-.-+.-.|... +.+-+++|.++
T Consensus 201 ~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l 280 (464)
T TIGR00699 201 IHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 280 (464)
T ss_pred ccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 11112211000 00 0135667777764434455555544455557766 67889999999
Q ss_pred HHhcCCeEEEecCCCCCcC
Q 017967 258 IQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 258 ~~~~~~~ii~De~y~~~~~ 276 (363)
|+++|+++|.||+..+|..
T Consensus 281 c~~~g~lLI~DEV~tGfGr 299 (464)
T TIGR00699 281 TKKHNVAFIVDEVQTGVGA 299 (464)
T ss_pred HHHcCCEEEEeeeeeCCCC
Confidence 9999999999999988854
No 367
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.65 E-value=0.00026 Score=67.49 Aligned_cols=234 Identities=14% Similarity=0.109 Sum_probs=127.3
Q ss_pred CcEEeeccccCCCCCCc-cccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc-
Q 017967 84 KKLNLGVGAYRTEELQP-YVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS- 159 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~-~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g- 159 (363)
..+||+.=.|....... +-.+.+.+++...... +...+-+...-+.++.+.+|+|+.. ++-+++ ..|
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-------e~a~vF--~mGf 207 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-------EDAIVF--SMGF 207 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-------cceEEE--eccc
Confidence 46677654442211111 1234555555443311 1112222333456777888888543 355555 222
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---------C-CCC
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---------A-PGG 229 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---------~-~~~ 229 (363)
+|.+ +. +-.+++||.-|+-.+-.......-++..|+.++.+.-+ |...||+.|++ + |-+
T Consensus 208 ~TNs--~~--~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~k 276 (519)
T KOG1357|consen 208 ATNS--MN--IPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWK 276 (519)
T ss_pred cccc--cC--cceeecCCcceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcch
Confidence 2323 22 23446677777766666666665667778887777642 56777777765 1 222
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH--HhcCCeEEEEEcCccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~~~vi~~~S~SK~~~ 307 (363)
+.++++-.--.=-|. ..++.+++.+++++..+++.||+..-=.-+. ....+-.+ .+..+..|-.+.|+|+||
T Consensus 277 ki~iivegiysmEg~---iv~Lp~vvalkkkykayl~lDEAHSiGA~g~---tGrgvce~~g~d~~dvDImMGtftKSfg 350 (519)
T KOG1357|consen 277 KILICVEGIYSMEGT---IVDLPEVVALKKKYKAYLYLDEAHSIGAMGA---TGRGVCEYFGVDPEDVDIMMGTFTKSFG 350 (519)
T ss_pred heeeeeccceeccCe---ecccHHHHHhhccccEEEEeeccccccccCC---CCcceeeccCCCchhheeecceehhhcc
Confidence 333332222212233 3467778888999999999999975433221 11122222 123355677899999999
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhhhcc---ccCCCchHHHHHHh
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARP---MYSNPPPMLLGIQL 353 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~---~~~~~s~~~q~~~~ 353 (363)
..| ||+ +.+++ +++.++..... ..+.+++..|.++.
T Consensus 351 a~G---Gyi---agsk~----lid~lrt~s~~~~yat~~sppvaqq~~s 389 (519)
T KOG1357|consen 351 AAG---GYI---AGSKE----LIDYLRTPSPSALYATSLSPPVAQQILT 389 (519)
T ss_pred ccc---cee---cCcHH----HHhhhccCCCceeecccCChHHHHHHHH
Confidence 776 888 55576 56655544322 23345666666654
No 368
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.61 E-value=8.4e-05 Score=69.86 Aligned_cols=156 Identities=19% Similarity=0.236 Sum_probs=36.9
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCC---Cc---chHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCc
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPT---WG---NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~---y~---~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (363)
+++...|+.++ +..+.+|..|+|..=- +. ...++++..|+++++|-.. ....++++++++++ ++
T Consensus 68 vNnnaAAv~L~---l~~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e---~T 137 (367)
T PF03841_consen 68 VNNNAAAVLLA---LNTLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITE---NT 137 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccc---ccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccc---cc
Confidence 56667776665 4445577777766522 22 2455777899999999752 24567888999984 45
Q ss_pred EEEEEcCCCCC--CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCC---cCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 231 FILLHGCAHNP--TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF---ASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 231 ~~~~i~~p~NP--TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~---~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
.+++-.+++|- .|.+-.. .++++++++++|++++++|-.-..+ ...+. ++.+.+..++..+-+ ++++|=-|.
T Consensus 138 a~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl-~~Ep~v~~~~~~GaD-lV~fSGdKl 214 (367)
T PF03841_consen 138 AALLKVHTSNFRIQGFTGEV-SLEELAELAKEHGLPVIVDLGSGLLVDLSPYGL-PDEPTVQEYLAAGAD-LVTFSGDKL 214 (367)
T ss_dssp ------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-S-EEEEETTSS
T ss_pred cccccccccccccccccccc-cHHHHHHHHhhcCCcEEEECCCCCCcCcccccC-ccccHHHHHhhcCCC-EEEEECCCc
Confidence 55555566665 3544333 6788888999999999999883111 10001 123345554444434 557777999
Q ss_pred cccccccceEEEEeeCChhHHHHHH
Q 017967 306 LGLYAERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~~~~~~~~ 330 (363)
+| |=..|.+ ++. ++.+++++
T Consensus 215 LG--GPQaGiI--~Gk-k~lI~~lk 234 (367)
T PF03841_consen 215 LG--GPQAGII--VGK-KELIEKLK 234 (367)
T ss_dssp SS--S-S-EEE--EEE-HHHHHHHH
T ss_pred CC--CCCeEEE--EeC-HHHHHHHh
Confidence 98 6667998 655 77555443
No 369
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.61 E-value=0.013 Score=55.68 Aligned_cols=228 Identities=14% Similarity=0.121 Sum_probs=126.1
Q ss_pred HHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcE
Q 017967 75 EAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV 152 (363)
Q Consensus 75 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i 152 (363)
..++.+.+ ..||+..+.-....++. -|.+.+++.+.... . ....|.... .-++.+.+.+.+ +.. ..++|
T Consensus 49 kl~D~~g~-EyiD~~ssw~~~~~Gha--npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~----~~~-~~~rv 119 (433)
T KOG1401|consen 49 KLFDPDGK-EYIDFTSSWAVTILGHA--NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVL----GKG-SAERV 119 (433)
T ss_pred eeecCCcc-eeeeeccceeccccCCC--CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcc----cCC-CccEE
Confidence 34444433 78888776533222322 45566655443322 1 112221111 223333333332 111 46899
Q ss_pred EEEeccchhHHHHHHHHHHHHhC-C---CC--EEEEcCCCCcch-HHHHhhCCCCeEEEeccc-CCC----CCCCHHHHH
Q 017967 153 ATVQGLSGTGSLRLAAALIERYF-P---GA--KVLISSPTWGNH-KNIFNDARVPWSEYRYYD-PKT----VGLDFEGMI 220 (363)
Q Consensus 153 ~~~~t~ggt~al~l~~~l~~~~~-~---gd--~Vlv~~P~y~~~-~~~~~~~G~~~~~v~~~~-~~~----~~~d~~~l~ 220 (363)
.+ .++||+|.+.+..+...+. . -+ +|+...-+|.+- ...+...+......|.++ ..+ .--|...++
T Consensus 120 ff--~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~ 197 (433)
T KOG1401|consen 120 FF--CNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALE 197 (433)
T ss_pred EE--ecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHH
Confidence 88 9999999999866654443 1 12 377777777443 333332232222222110 000 112689999
Q ss_pred HHHHcCCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE
Q 017967 221 ADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (363)
Q Consensus 221 ~~l~~~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 299 (363)
+.++.+......+++-.-+=--|.. .+++-+..|...|+++++++|.||+.-+|.--+ ..+....+ ...+++
T Consensus 198 k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e~~-~~~PDI--- 270 (433)
T KOG1401|consen 198 KLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQEYF-GVTPDI--- 270 (433)
T ss_pred HHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHHHh-CcCCcc---
Confidence 9998765444455543334344444 456778889999999999999999998875432 23333333 233333
Q ss_pred EcCccccccccccceEEEEeeCChh
Q 017967 300 QSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 300 ~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
..+.|.++ .|+-+|.. +.. ++
T Consensus 271 ~t~aK~L~-gGlPigA~--~v~-~k 291 (433)
T KOG1401|consen 271 TTVAKPLG-GGLPIGAT--GVR-DK 291 (433)
T ss_pred eeehhhcc-CCceeEEE--eeh-HH
Confidence 45689998 89999999 554 44
No 370
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.54 E-value=0.0019 Score=61.78 Aligned_cols=168 Identities=13% Similarity=0.072 Sum_probs=91.3
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEE-EcCCCCcc--hHHHHhhCCCCeEEEecccC--CCCCCCHHHHHHHHHcCCCCc
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVL-ISSPTWGN--HKNIFNDARVPWSEYRYYDP--KTVGLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vl-v~~P~y~~--~~~~~~~~G~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~ 230 (363)
...|||++.+.+ .++++.+||+++ +..-++.+ +...++.+| ++..+..... .+..++++.+ +..+ +.
T Consensus 73 l~GggT~~~ea~--~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~~~-d~ 144 (364)
T PRK12462 73 LQGGSSLQFSMI--PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DWDA-RA 144 (364)
T ss_pred EeccHHHHHHHH--HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----ccCC-CC
Confidence 467799998888 778888999655 44444422 344556777 5544432111 1234455554 2212 34
Q ss_pred EEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
..+.+|.-...||+.++ ++.+.++.++|+|.+ +.+...+. .+..+ -++..|-=|++|.||
T Consensus 145 ~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~s-S~~~s~pi-----d~~~~------dvi~agsQKnlgP~G 204 (364)
T PRK12462 145 PFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMS-SDFMSRPF-----DVEAY------GMVYAHAQKNLGPAG 204 (364)
T ss_pred cEEEEccCCCCceEecC--------cccccCCCeEEEEcC-chhhCCCC-----ChHHc------cEEEeeccccCCCCc
Confidence 45555555557788876 223346899999999 55443321 22211 355666699999888
Q ss_pred ccceEEEEeeCChhHHHHHHHH------HHhh--hccccCCCchHHHHHHhccc
Q 017967 311 ERIGAMNVVCSSSDLAARVKSQ------LKRL--ARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 311 ~RvG~i~~v~~~~~~~~~~~~~------l~~~--~~~~~~~~s~~~q~~~~~~l 356 (363)
+ +.+ +.. ++.+++..+. ++.. ...++..||.+.-+++...|
T Consensus 205 l--tvv--ivs-~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l 253 (364)
T PRK12462 205 V--TVA--IIR-RALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVL 253 (364)
T ss_pred e--EEE--EEC-HHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHH
Confidence 6 444 444 5544433221 1111 12344466666666654443
No 371
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.49 E-value=0.019 Score=60.64 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=62.8
Q ss_pred HHHHHHHHc-----CCCCcEEEEEcCC--CCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH
Q 017967 217 EGMIADIKA-----APGGSFILLHGCA--HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (363)
Q Consensus 217 ~~l~~~l~~-----~~~~~~~~~i~~p--~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (363)
+.+++.+.+ .+++...++ ..| +.--|..+ ++.-+++|.++|+++|+++|.||++.+|.-.+ ..+...
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI-~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG---~~fa~e- 641 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALI-IEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG---VESAWE- 641 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEE-EeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc---chhhHH-
Confidence 456666652 123333444 454 56667765 67888999999999999999999999995432 122222
Q ss_pred HHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhH
Q 017967 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDL 325 (363)
Q Consensus 289 ~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~ 325 (363)
...-.++++ .++|.++ .| +-+|.+ ++. +++
T Consensus 642 ~~gv~PDIi---~~gKgLt-gG~~Plaa~--l~~-~~I 672 (817)
T PLN02974 642 LLGCKPDIA---CYAKLLT-GGLVPLAAT--LAT-EEV 672 (817)
T ss_pred hcCCCCCEE---eeccccc-CCCCccEEE--EEc-HHH
Confidence 223334444 3589898 78 589988 665 663
No 372
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.45 E-value=0.0033 Score=58.60 Aligned_cols=141 Identities=13% Similarity=0.159 Sum_probs=101.2
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh---CCCCEEEEcCC-CCcchHHHHh
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPGAKVLISSP-TWGNHKNIFN 195 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~---~~gd~Vlv~~P-~y~~~~~~~~ 195 (363)
..|....+...|.+++.+.+ +. +.++. |.-|.+|-+++..++... .||.+..+++- .|.......+
T Consensus 73 EAYagsrs~~~L~~avkdif-Gf-------q~~iP--thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIF-GF-------QYTIP--THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHhc-Cc-------eeeee--ccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 56988999999999999986 32 45555 777777776664333222 26655555554 4455566778
Q ss_pred hCCCCeEEEecccCC--------CCCCCHHHHHHHHHcCCC--CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE
Q 017967 196 DARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (363)
Q Consensus 196 ~~G~~~~~v~~~~~~--------~~~~d~~~l~~~l~~~~~--~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 265 (363)
.+|..++-++.++.. .+.+|++.|++.+.+... -+.+++....|.-.|.-.|.+-++++.++|++|++.+
T Consensus 143 ~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipv 222 (471)
T COG3033 143 INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPV 222 (471)
T ss_pred hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcE
Confidence 899988888764322 257899999999987332 3444444444667799999999999999999999999
Q ss_pred EEecC
Q 017967 266 FFDVA 270 (363)
Q Consensus 266 i~De~ 270 (363)
+.|.+
T Consensus 223 v~Da~ 227 (471)
T COG3033 223 VMDAA 227 (471)
T ss_pred Eeehh
Confidence 99987
No 373
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0043 Score=58.39 Aligned_cols=186 Identities=14% Similarity=0.142 Sum_probs=105.6
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcch-HHHHhhCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDAR 198 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~-~~~~~~~G 198 (363)
..|.... .-+|-+++++.+-.. -..+++ +++|++|.+++..|...+...-.|+--.-+|.+. ...+-..|
T Consensus 87 ~~~~~~p-i~~~Ae~L~s~~P~~------l~~vfF--~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~ 157 (442)
T KOG1404|consen 87 SGYLNPP-IHDLAEALVSKLPGD------LKVVFF--VNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTG 157 (442)
T ss_pred ccccCCc-HHHHHHHHHHhCCCC------ceEEEE--ecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhccccc
Confidence 3453322 346667776665222 234656 9999999999977766555333455555566443 33333333
Q ss_pred CCeEEEecc----------cCC----CCCCC---------HHHHHHHHHc-CCCCcEEEEEcCCCCCCCCC-CCHHHHHH
Q 017967 199 VPWSEYRYY----------DPK----TVGLD---------FEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEK 253 (363)
Q Consensus 199 ~~~~~v~~~----------~~~----~~~~d---------~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~-~s~~~~~~ 253 (363)
......+.. .++ -++-+ .+++++.+.. .+.....++.-.-+---|++ +++--+++
T Consensus 158 ~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka 237 (442)
T KOG1404|consen 158 LSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKA 237 (442)
T ss_pred CCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHH
Confidence 322221110 000 01111 1334444433 33334444433333333443 45577899
Q ss_pred HHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhH
Q 017967 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 254 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~ 325 (363)
..++|+++|.++|.||+-.+|.-.+ .++.+ +..+-+==+-+++|.+| .|+-+|.+ ++. +++
T Consensus 238 ~~~~v~k~Ggl~IaDEVqtGfGRtG---~~wgf----e~h~v~PDIvTmAKgiG-nG~Pl~AV--vtt-~EI 298 (442)
T KOG1404|consen 238 AYKVVRKRGGLFIADEVQTGFGRTG---HMWGF----ESHGVVPDIVTMAKGIG-NGFPLGAV--VTT-PEI 298 (442)
T ss_pred HHHHHHHcCCEEEehhhhhcccccc---ccccc----cccCCCccHHHHHhhcc-CCCcceee--ecC-HHH
Confidence 9999999999999999988886543 23432 22222223568999999 89999999 775 773
No 374
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.38 E-value=0.0053 Score=59.72 Aligned_cols=143 Identities=12% Similarity=0.035 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHH---------
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKN--------- 192 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~----~-~g-d~Vlv~~P~y~~~~~--------- 192 (363)
..+|-+.+++..-.. .-++|++ +.||++|++.+..+...+ . |. .+++.-..+|.+-.-
T Consensus 89 a~~LA~~L~~~aP~~-----~l~~vFf--~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~ 161 (449)
T COG0161 89 AIELAEKLAELAPEG-----GLDHVFF--TDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPV 161 (449)
T ss_pred HHHHHHHHHHhCCCC-----CccEEEE--eCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCch
Confidence 456666666664211 1378988 999999999986654333 1 33 237777778833211
Q ss_pred -----HHhhCCCCeEEEeccc---CCC---CC----CCHHHHHHHHHcCC-CCcEEEEEcCC-CC-CCCCCC-CHHHHHH
Q 017967 193 -----IFNDARVPWSEYRYYD---PKT---VG----LDFEGMIADIKAAP-GGSFILLHGCA-HN-PTGIDP-TPEQWEK 253 (363)
Q Consensus 193 -----~~~~~G~~~~~v~~~~---~~~---~~----~d~~~l~~~l~~~~-~~~~~~~i~~p-~N-PTG~~~-s~~~~~~ 253 (363)
.+...-..+..+|.-. ... +. -..++|++.+.+.. ++...++ ..| .- -.|..+ ++.-|++
T Consensus 162 ~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI-~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 162 ALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFI-VEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEE-ecccccccCCcccCChHHHHH
Confidence 1111111122222100 001 11 23567777777654 4444444 444 22 356554 4567889
Q ss_pred HHHHHHhcCCeEEEecCCCCCcCCC
Q 017967 254 IADVIQEKNHIPFFDVAYQGFASGS 278 (363)
Q Consensus 254 i~~~~~~~~~~ii~De~y~~~~~~~ 278 (363)
+-++|++||+++|.||+--+|.-.+
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG 265 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTG 265 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCc
Confidence 9999999999999999999987553
No 375
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.35 E-value=0.0028 Score=60.82 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=98.5
Q ss_pred chHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC---CC---CEEEEcCCCCcchHHHHhhCCCC
Q 017967 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---PG---AKVLISSPTWGNHKNIFNDARVP 200 (363)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~---~g---d~Vlv~~P~y~~~~~~~~~~G~~ 200 (363)
+...+.+++.+++..-.+.+ +..+.+.|.||++++.+.-.-..... .| ..++++.-....+....+.++++
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~---~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAP---SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVE 193 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCC---ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEE
Confidence 44455555555543333322 22444558999999544422111111 12 34666666667777778889999
Q ss_pred eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh-cCCeEEEecCCCCCcC
Q 017967 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFAS 276 (363)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~De~y~~~~~ 276 (363)
+..+|++ +.++.+|+..+.+.+.+ ++..++..-|+-|+|.. +++++|.++..+ +++.+-+|.+-.+|.-
T Consensus 194 l~~V~~~-~~~~~~D~~k~~~~i~e---Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~ 263 (491)
T KOG1383|consen 194 LREVPLD-EGDYRVDPGKVVRMIDE---NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFIN 263 (491)
T ss_pred EEeeecc-ccceEecHHHHHHHhcc---ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccc
Confidence 9999995 47899999999999984 67777777899999965 778888888888 9999999999888865
No 376
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.33 E-value=0.0018 Score=61.48 Aligned_cols=141 Identities=14% Similarity=0.062 Sum_probs=85.0
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCCeEEEecc-cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCH-HHHHH
Q 017967 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEK 253 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~ 253 (363)
.++.|+.+.-........+..+|.+++.++.. +.+....|.+.+++.+++.....++.+++. +++..... +++++
T Consensus 100 ~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltt---tscfapr~~D~i~~ 176 (389)
T PF05889_consen 100 KAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTT---TSCFAPRLPDDIEE 176 (389)
T ss_dssp T--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEE---SSTTTTB----HHH
T ss_pred CCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEe---cCccCCCCCccHHH
Confidence 56889988876666667778899999999842 233345578889988876444444444433 22222233 45999
Q ss_pred HHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHH
Q 017967 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA 326 (363)
Q Consensus 254 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~ 326 (363)
|+++|+++|+..|+..+|.--... -...+......+---+++.|.-|+|= -+ +|-.++.++++..+
T Consensus 177 IakiC~~~~IPhlvNnAYgvQ~~~----~~~~i~~a~~~GRvda~vqS~dkNF~-VP--vGgai~As~~~~~i 242 (389)
T PF05889_consen 177 IAKICKEYDIPHLVNNAYGVQSSK----CMHLIQQAWRVGRVDAFVQSTDKNFM-VP--VGGAIMASFDPSGI 242 (389)
T ss_dssp HHHHHHHHT--EEEEGTTTTT-HH----HHHHHHHHHHHSTCSEEEEEHHHHHC-EE--SSHEEEEESSHHHH
T ss_pred HHHHHHHcCCceEEccchhhhHHH----HHHHHHHHHhcCCcceeeeecCCCEE-ec--CCCcEEEecCHHHH
Confidence 999999999999999998764321 01112222233344467899999995 44 45554577777733
No 377
>PLN02672 methionine S-methyltransferase
Probab=97.25 E-value=0.006 Score=65.67 Aligned_cols=210 Identities=14% Similarity=0.044 Sum_probs=137.1
Q ss_pred HccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHH----HHhCCCCEEEEcCCCCcc
Q 017967 114 LERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALI----ERYFPGAKVLISSPTWGN 189 (363)
Q Consensus 114 ~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~----~~~~~gd~Vlv~~P~y~~ 189 (363)
+......-|.++.|...||+.+|.|+...++.++++++|++ .++-..|++.+.+++ ++++.+.+..++ +.|
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 488 (1082)
T PLN02672 414 LKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKW-- 488 (1082)
T ss_pred HccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHH--
Confidence 33434477889999999999999999999999999999988 999999998874432 222233222222 122
Q ss_pred hHHHHhhCC--------CC--eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Q 017967 190 HKNIFNDAR--------VP--WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (363)
Q Consensus 190 ~~~~~~~~G--------~~--~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~ 259 (363)
...+...| .. |+.-|- .- +.+.+.+++- ++.+++..-.+ +-..+....+.|++.++
T Consensus 489 -~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 554 (1082)
T PLN02672 489 -LTSLAIENATSDSKSDDVITVIEAPR------QS--DLVIELIKKL--KPQVVVTGMAD---FEMRTSTAFEHLLNVTA 554 (1082)
T ss_pred -HhHhhhhcccccCccCCeEEEEeCCC------cc--hHHHHHHHhC--CCeEEEEeccc---hhhhhHHHHHHHHHHHH
Confidence 22222221 22 222221 11 2455555542 23344433322 44556778999999999
Q ss_pred hcCCeEEEecC-CCCCcCCCCCCchhHHHHHHh---cCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHh
Q 017967 260 EKNHIPFFDVA-YQGFASGSLDNDASSVRLFAT---RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 335 (363)
Q Consensus 260 ~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~---~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~ 335 (363)
+.|..++.|+. |.++... +....+..++. ...+..++.++-|+-=.+.+-+.++ +.-+.. +.+.+.+
T Consensus 555 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~ 625 (1082)
T PLN02672 555 EIGARLFLDISDHLELSSL---PGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFV--ISENEA----VLKALSK 625 (1082)
T ss_pred hhCcEEEEehhhheeeccC---CCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEE--ecCcHH----HHHHHHH
Confidence 99999999998 3444432 22334444432 3457778889999887789999999 665555 6777777
Q ss_pred hhccccCCCchHHHHH
Q 017967 336 LARPMYSNPPPMLLGI 351 (363)
Q Consensus 336 ~~~~~~~~~s~~~q~~ 351 (363)
.......+.+.++|.-
T Consensus 626 ~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 626 TGEVLEGRTAIISQFY 641 (1082)
T ss_pred HHHhhccchHHHHHHH
Confidence 7778888999999873
No 378
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.23 E-value=0.018 Score=61.82 Aligned_cols=189 Identities=16% Similarity=0.097 Sum_probs=110.3
Q ss_pred EeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCC-----cc----hHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-----EG----LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-----~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.++.|.|. .+++..+.+.+.... .....|+|. +| +.+++..+++++.- +++++.+ +
T Consensus 107 fiG~G~y~-----~~~P~~v~~~i~~~~--~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~------~~anaSL--~ 171 (993)
T PLN02414 107 YIGMGYYN-----THVPPVILRNILENP--GWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGL------PMSNASL--L 171 (993)
T ss_pred ccCCCCCC-----ccCCHHHHHHHHhCh--HHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCC------ChhhEee--c
Confidence 45666652 235566655544322 122445543 34 45677778887532 3688977 9
Q ss_pred cchhHHHHHHHHHHHHhCCC--CEEEEcCCCCcchHHHHh----hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPG--AKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~g--d~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
-++|.+.+.+.... .+.+| |+|+|++-.|+.+...++ ..|++++.++..+ .+ ... +...
T Consensus 172 d~aTAaaea~~~a~-~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-----~~------~~~---~~v~ 236 (993)
T PLN02414 172 DEGTAAAEAMAMCN-NILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD-----FD------YSS---GDVC 236 (993)
T ss_pred CChHHHHHHHHHHH-hcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh-----hc------ccc---CceE
Confidence 99999998774332 23444 789999999998876664 5799999998732 11 001 1232
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc---cc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL---GL 308 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~---~l 308 (363)
.+++.+| |-+|.+.+ +++|.++|+++|+++++ .+ ..+...... +.. +. .-.|++++--|.. |.
T Consensus 237 ~vlvq~P-~~~G~v~d---v~~I~~~ah~~GaL~iV-aa-d~lal~~l~----~pg---e~-GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 237 GVLVQYP-ATDGEVLD---YAEFVKNAHANGVKVVM-AT-DLLALTMLK----PPG---EW-GADIVVGSAQRFGVPMGY 302 (993)
T ss_pred EEEEecC-CCCeEEcC---HHHHHHHHHHcCCEEEE-EE-CHHHhcCCC----CHh---hc-cCcEEEECCCccccCCCC
Confidence 3333333 34899864 66788889999999998 33 222222110 111 12 2235567766654 22
Q ss_pred ccccceEEEEeeC
Q 017967 309 YAERIGAMNVVCS 321 (363)
Q Consensus 309 ~G~RvG~i~~v~~ 321 (363)
.|=+.|++ .+.
T Consensus 303 GGP~aGfl--avr 313 (993)
T PLN02414 303 GGPHAAFL--ATS 313 (993)
T ss_pred CCCCeeEE--EEC
Confidence 35558888 554
No 379
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.60 E-value=0.07 Score=51.10 Aligned_cols=153 Identities=13% Similarity=0.149 Sum_probs=92.5
Q ss_pred EeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCc-----ch----HHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----GL----AAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-----G~----~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
-++.|.|. .++|+.+.+.+.. ++.....|+|.+ |. .++..-++++ .|.++... .. .
T Consensus 79 fiG~GyY~-----~~~P~vI~rnile--~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL----TGm~VANA--Sm--~ 143 (450)
T COG0403 79 FIGAGYYD-----TYTPPVILRNILE--NPEWYTAYTPYQPEISQGRLEALFEFQTLVADL----TGLDVANA--SM--L 143 (450)
T ss_pred hccCcccC-----CcCcHHHHHHhhc--CccccccCCCCchhhhhHHHHHHHHHHHHHHHH----hCCCcccc--hh--h
Confidence 56788873 3345555433211 345667787743 32 2333344444 23333322 22 5
Q ss_pred cchhHHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHh----hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE
Q 017967 158 LSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
-++|.+-+.+....+.-+ +..+|+|+.-.|+.+...++ ..|++++.++.+ |++.+++. .. .....
T Consensus 144 DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~~--~~~~g 213 (450)
T COG0403 144 DEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-DD--GDVFG 213 (450)
T ss_pred hhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-cc--cCeEE
Confidence 677877776643333332 35899999999999999886 356777777652 67777776 32 24556
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
+++.+|+ -.| ....++++|.+.+++++.++++
T Consensus 214 v~vQyP~-~~G--~~~~d~~~l~~~~h~~~al~~v 245 (450)
T COG0403 214 VLVQYPN-TFG--IVEEDLRALIEAAHSAGALVIV 245 (450)
T ss_pred EEEecCC-CCC--ccchhHHHHHHHHhhcCCEEEE
Confidence 6655554 344 4567899999999999876664
No 380
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=96.37 E-value=0.0056 Score=58.79 Aligned_cols=94 Identities=16% Similarity=0.089 Sum_probs=71.7
Q ss_pred EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC---CcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 179 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 179 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
.+...+-+....+..+...|+++..++.++ +++++.+.|.+++.+... .+.+++ .+- =|..+-.-+++.+|.
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~-at~--GTT~~ca~D~l~elg 258 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVC-ATL--GTTSSCAFDELEELG 258 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEE-Eee--cCccccccccHHHhc
Confidence 356667788888888888999999999853 899999999999986221 233333 232 233334568999999
Q ss_pred HHHHhcCCeEEEecCCCCCcCC
Q 017967 256 DVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~ 277 (363)
.+|+++++++-+|.+|++..+.
T Consensus 259 ~Vc~~~glWLHVDAAYAGsa~i 280 (511)
T KOG0628|consen 259 PVCREEGLWLHVDAAYAGSAFI 280 (511)
T ss_pred chhhhcCEEEEeehhhcccccc
Confidence 9999999999999999987765
No 381
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=96.26 E-value=0.13 Score=50.15 Aligned_cols=151 Identities=15% Similarity=0.174 Sum_probs=80.2
Q ss_pred cEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC-----Ccch----HHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGL----AAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G~----~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
.--++.|.|. -++++.+.+.+.. .++....|.| .+|. .++...++++. |.++ -|.-+
T Consensus 67 ~~fiG~G~y~-----~~~P~~i~~~i~~--~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLT----Gmdv--aNaSl- 132 (429)
T PF02347_consen 67 TSFIGAGSYT-----HYVPAVIDRNILS--RPEFYTAYTPYQPEISQGRLQALFEYQSMICELT----GMDV--ANASL- 132 (429)
T ss_dssp TS---CTTT----------HHHHH-HHC--CHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHH----TSSE--E-SEB-
T ss_pred CccccccccC-----ceeChhhcCcccc--ChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhh----CCCc--cCCCC-
Confidence 3345677762 2344455441211 2233356666 4453 34555555553 2221 12222
Q ss_pred eccchhHHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHh----hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCc
Q 017967 156 QGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (363)
..|++.+-+.+....+..+ .+++|+++.-.++.+...++ ..|++++.++.++ +...| . +++
T Consensus 133 -yd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~--~~~~d--------~---~~~ 198 (429)
T PF02347_consen 133 -YDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDE--DGTTD--------D---DDT 198 (429)
T ss_dssp -SSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBT--TCSB---------S---TTE
T ss_pred -CChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccc--cCCcc--------c---cCe
Confidence 5677777776643333333 33699999999999988654 5788999998743 23333 2 457
Q ss_pred EEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
..+++.+|| =.|.. +++++|.++++++|.++++
T Consensus 199 a~v~vq~Pn-~~G~~---ed~~~i~~~~h~~gal~~~ 231 (429)
T PF02347_consen 199 AAVMVQNPN-TFGVF---EDIKEIADIAHAAGALVIV 231 (429)
T ss_dssp EEEEEESS--TTSB-----THHHHHHHHHHTT-EEEE
T ss_pred EEEEeecCC-CCceE---eeHHHHHHHHHHcCCEEEE
Confidence 777778885 45765 3488899999999988776
No 382
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.15 E-value=0.02 Score=51.31 Aligned_cols=178 Identities=15% Similarity=0.100 Sum_probs=98.2
Q ss_pred HHHHHHHHHHhCCCCE-EEEcCCCCcchHHHHhhCCCCeEEE-ecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 164 LRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEY-RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~-Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+.+.+.-++.-+|..+ |+-+.-.-.......-..|.+.+.+ ++.+.+....|++.++..+.+..+...+-++..-+
T Consensus 89 lslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~stts-- 166 (432)
T KOG3843|consen 89 LSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTS-- 166 (432)
T ss_pred HHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeeccc--
Confidence 3444323443445543 4433333333334445688887666 45555556668999999988765555444432210
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH---HhcCCeEEEEEcCccccccccccceEEEE
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF---ATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---~~~~~~vi~~~S~SK~~~l~G~RvG~i~~ 318 (363)
.=..-+++.+++|..+|..|++.-|+.++|.--... .++.. .+.+--.-++.|+-|+|-.| +|-.++
T Consensus 167 cfapr~pd~leaiaaica~~diphivnnayglqsee-------~i~~iaa~~~~grida~vqsldknf~vp---vggaii 236 (432)
T KOG3843|consen 167 CFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE-------CIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAII 236 (432)
T ss_pred ccCCCCCchHHHHHHHHHccCchhhhccccccchHH-------HHHHHHHHhhhccHHHHHHHhhhcceee---cchhHh
Confidence 011124688999999999999999999998764321 22222 22333345578999999776 454422
Q ss_pred eeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 319 VCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 319 v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.+-+.. +++.+.+.-. .-..+.++-.++..+|..+
T Consensus 237 a~fk~n----~iq~iak~yp--grasa~ps~dllitll~~g 271 (432)
T KOG3843|consen 237 AAFKDN----FIQEIAKMYP--GRASASPSLDLLITLLSLG 271 (432)
T ss_pred hHhHHH----HHHHHHHhCC--CccccCccHHHHHHHHHhc
Confidence 222333 4444433211 1233344555555555443
No 383
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=96.07 E-value=0.51 Score=50.55 Aligned_cols=150 Identities=13% Similarity=0.162 Sum_probs=91.4
Q ss_pred EeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCc-----ch----HHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----GL----AAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-----G~----~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
-++.|.|. ...++.+.+.+.. .++....|.|.+ |. .++...++++. |.+ ..|..+ .
T Consensus 68 fig~G~y~-----~~~p~~i~r~v~~--~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt----Gm~--~aNaSl--~ 132 (939)
T TIGR00461 68 YIGMGYYG-----TILPPVIQRNLLE--NPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT----GLP--VANASL--L 132 (939)
T ss_pred cCCCCcCC-----CcCChHHHHHHHh--CchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH----CCC--hhhhhc--c
Confidence 44677763 3345555544332 233346676643 43 34555566653 222 244444 6
Q ss_pred cchhHHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHh----hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE
Q 017967 158 LSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
.++|.+.+.+........ ++++|+|++-.++.+...++ ..|++++.+++ +.|++.+ +...
T Consensus 133 d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~----------~~l~~~~-----~~~~ 197 (939)
T TIGR00461 133 DEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC----------SDIKKAV-----DVFG 197 (939)
T ss_pred chhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH----------HHHhhcC-----CEEE
Confidence 788887776532222221 34799999999988887665 77888888754 3344433 2456
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
+++.+| |=+|... ++++|++.++++|.+++++--
T Consensus 198 v~~q~P-n~~G~ie---d~~~i~~~~h~~gal~~~~ad 231 (939)
T TIGR00461 198 CLLQYP-ATDGSIL---DYKQLIDALHSHKSLVSVAAD 231 (939)
T ss_pred EEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEec
Confidence 666676 4578774 688899999999998888443
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=95.90 E-value=0.063 Score=51.33 Aligned_cols=87 Identities=13% Similarity=0.044 Sum_probs=60.8
Q ss_pred EcCCCCcchHHHHhhCC---CCeEEEecccCCCCCCCHHHHHHHHHcCCCC---cEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 182 ISSPTWGNHKNIFNDAR---VPWSEYRYYDPKTVGLDFEGMIADIKAAPGG---SFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 182 v~~P~y~~~~~~~~~~G---~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
+++-++......+..+| -.++.|+.+ ..+.+++++||+.+.++..+ + +++.++ -=|.+.=.-+++..|+
T Consensus 202 tSeesHYSi~kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~P-f~vnaT--aGTTV~GAFDdL~~ia 276 (510)
T KOG0629|consen 202 TSEESHYSIKKAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVP-FFVNAT--AGTTVLGAFDDLNGIA 276 (510)
T ss_pred ecccchhhHHHHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCC-eEEEec--CCceeeeccCcHHHHH
Confidence 33445556677777777 367888874 46889999999998774433 3 333222 2233333447889999
Q ss_pred HHHHhcCCeEEEecCCCC
Q 017967 256 DVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~ 273 (363)
++|++|++++-+|.+|.+
T Consensus 277 diC~k~~lWmHvDAAwGG 294 (510)
T KOG0629|consen 277 DICEKHKLWMHVDAAWGG 294 (510)
T ss_pred HHHHhcCEEEEeeccccc
Confidence 999999999999999987
No 385
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=95.81 E-value=0.1 Score=48.42 Aligned_cols=120 Identities=13% Similarity=0.079 Sum_probs=74.6
Q ss_pred HHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC--CCCEEEEcCCCCcch-----HHHHhhCCCCeEE
Q 017967 131 FNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PGAKVLISSPTWGNH-----KNIFNDARVPWSE 203 (363)
Q Consensus 131 lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~--~gd~Vlv~~P~y~~~-----~~~~~~~G~~~~~ 203 (363)
+-..+|-++..+ +.++++ +.+.+- ++.-.+...++ +|++|++++-.-.+. ...+...|..
T Consensus 81 lgdklApLiGA~------~~Evvv--~dtts~--nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~--- 147 (407)
T COG3844 81 LGDKLAPLIGAR------AGEVVV--TDTTSI--NLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG--- 147 (407)
T ss_pred HHHHhhhhhcCC------CCceEE--eCCcch--HHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---
Confidence 344555555443 577766 443333 33333444444 689998888533222 2223333322
Q ss_pred EecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
+.+ ...+.++++++++. +...+++++..|.-||..+... +|-.++.+++++++.|-+.+.
T Consensus 148 ~~~----~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~dm~---aiT~~AH~~galv~wDLAHsa 207 (407)
T COG3844 148 YDL----EGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLLDMR---AITALAHQHGALVGWDLAHSA 207 (407)
T ss_pred ccc----eeeeChHHHHHhhc---cceEEEEeccccccccceeeHH---HHHHHHHhcCceEEeehhccc
Confidence 111 23456778988887 4677888899999999998654 555568999999999999753
No 386
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.81 E-value=0.13 Score=48.78 Aligned_cols=204 Identities=12% Similarity=-0.004 Sum_probs=116.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
+++||+...+....++..+.+.+...++...-. +-..-|+...-+..+.+.+|+|+.. ++.|+. .-|-
T Consensus 95 ~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-------E~aivY---s~gF 164 (467)
T KOG1358|consen 95 DVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-------EDAIVY---SYGF 164 (467)
T ss_pred eeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-------cceeee---cccc
Confidence 678888777654444444444444444443211 1112377766778899999999855 356655 3233
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC-------CC--CcEE
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-------PG--GSFI 232 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-------~~--~~~~ 232 (363)
.++.-+ +-+....||.|.+-.-.......-++...-.+++..- -|.+.++..+.+. ++ .+..
T Consensus 165 ~ti~S~--ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rr 235 (467)
T KOG1358|consen 165 STIESA--IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRR 235 (467)
T ss_pred chhhhc--chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceE
Confidence 332222 3445669999988876666666655555555555542 3556665554431 11 1233
Q ss_pred EEEcC-CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCC---CchhHHHHHHhcCCeEEEEEcCcccccc
Q 017967 233 LLHGC-AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD---NDASSVRLFATRGMELLVAQSYSKNLGL 308 (363)
Q Consensus 233 ~~i~~-p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~---~~~~~~~~~~~~~~~vi~~~S~SK~~~l 308 (363)
+++.. ---+||...+. .+|+++..|+...+|.||.|+--..+..- ..++. .+..+-.++++|++-.++.
T Consensus 236 fiv~EGl~~N~g~i~pl---~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~----v~~~~iDiv~~sm~~alas 308 (467)
T KOG1358|consen 236 FIVVEGLYANTGDICPL---PEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFG----VPITDIDIVTASMETALAS 308 (467)
T ss_pred EEEEEeeccCCCccccc---HHHHHHHhhheEEEEEecccccccccccCccccccCC----CCccceeeeeecccccccc
Confidence 44333 34578887765 55667788999999999998633322100 01111 1233556788888888764
Q ss_pred ccccceEE
Q 017967 309 YAERIGAM 316 (363)
Q Consensus 309 ~G~RvG~i 316 (363)
.| |+.
T Consensus 309 ~G---gFc 313 (467)
T KOG1358|consen 309 GG---GFC 313 (467)
T ss_pred cC---cee
Confidence 33 555
No 387
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=94.21 E-value=1.5 Score=41.00 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=46.4
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
|.++|+.+++. +....+++-.-+---|++.++ .-+++.-++|.+||+++|.||+-.++.-.
T Consensus 195 d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT 256 (427)
T KOG1402|consen 195 DAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLART 256 (427)
T ss_pred CHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhccccc
Confidence 78999999985 345555544446677776654 56788999999999999999998777644
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=93.43 E-value=0.55 Score=43.10 Aligned_cols=159 Identities=14% Similarity=0.138 Sum_probs=90.3
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH--------h-hCCC---CeEEE-ecccC-------------
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--------N-DARV---PWSEY-RYYDP------------- 209 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~--------~-~~G~---~~~~v-~~~~~------------- 209 (363)
.+++|++|..++.++.+.+.....|++.+-.|.++.... . --|+ .++.+ |+.+-
T Consensus 107 F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a 186 (452)
T KOG1403|consen 107 FVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDA 186 (452)
T ss_pred EecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcc
Confidence 389999999999887776765555666666665554322 1 1111 12222 22110
Q ss_pred CCCCCCHHHHHHHHHc---CCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhH
Q 017967 210 KTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 285 (363)
Q Consensus 210 ~~~~~d~~~l~~~l~~---~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (363)
+.+..-.+.+++.++. ...+...++--+-+.=-|.++++ .-.+++++..+.+|-+.|.||+--+|.--+ ...|.
T Consensus 187 ~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG--~hyWa 264 (452)
T KOG1403|consen 187 DMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG--SHYWA 264 (452)
T ss_pred cchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc--hhhhh
Confidence 0011112334444332 22333344322333334555555 456778888999999999999987876432 33555
Q ss_pred HHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 286 VRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 286 ~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+... +.-++ +-.+.|.+| .|.-++.+ ++. ++
T Consensus 265 fq~y-~fiPD---IVtmgKpmG-NGhPVa~V--att-ke 295 (452)
T KOG1403|consen 265 FQTY-NFIPD---IVTMGKPMG-NGHPVAAV--ATT-KE 295 (452)
T ss_pred hhhh-ccccc---hheecccCC-CCCeeeEE--ecc-HH
Confidence 4322 22222 346789999 99999999 554 76
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=91.32 E-value=2.9 Score=42.49 Aligned_cols=142 Identities=16% Similarity=0.130 Sum_probs=92.5
Q ss_pred CCCCC---CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--CCC----CEEEEcCCCCcch
Q 017967 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG----AKVLISSPTWGNH 190 (363)
Q Consensus 120 ~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~~g----d~Vlv~~P~y~~~ 190 (363)
+-|.| .+|..++-+.+-+++-...|. +++.+ |-++|.++-....+.++.+ ..| ...+||-......
T Consensus 569 HPF~P~eQaqGY~~lf~~Le~~Lc~iTG~----D~~s~-QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 569 HPFAPVEQAQGYQQLFTELEKDLCEITGF----DSFSL-QPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN 643 (1001)
T ss_pred CCCCchHHHhhHHHHHHHHHHHhheeecc----cceee-cCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC
Confidence 44555 457666666666665433222 44443 4444443333322222222 133 3478888888888
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
...+...|.++++|.++ .++.+|..+|.+...++.+.-..+.+..|+ ..-.=++.+.++.++..++|--+..|.+
T Consensus 644 PASA~MagmkvvpV~~~--~~G~id~~dLk~kaekh~~~Laa~MvTYPS---T~GvfE~~i~d~cd~iHehGGQVYlDGA 718 (1001)
T KOG2040|consen 644 PASAAMAGMKVVPVGCD--ANGNIDMVDLKAKAEKHKDNLAALMVTYPS---THGVFEEGIDDICDIIHEHGGQVYLDGA 718 (1001)
T ss_pred hhhHHhcCCEEEEeecc--CCCCccHHHHHHHHHHhhhhhheeEEeccc---ccccccccHHHHHHHHHhcCCEEEecCC
Confidence 88899999999999984 568899999998887655554455555553 2223357889999999999999999987
Q ss_pred C
Q 017967 271 Y 271 (363)
Q Consensus 271 y 271 (363)
-
T Consensus 719 N 719 (1001)
T KOG2040|consen 719 N 719 (1001)
T ss_pred C
Confidence 4
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=90.13 E-value=6.9 Score=42.12 Aligned_cols=148 Identities=11% Similarity=0.070 Sum_probs=82.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCc-----ch----HHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----GL----AAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-----G~----~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
-..-++.|.|. .+++..+.+.+.. +++....|.|.+ |. .++..-++++. |.++. |-.+
T Consensus 80 ~~~fiG~G~y~-----~~~P~vi~~~i~~--~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt----Gm~va--NASl 146 (954)
T PRK12566 80 WTSLIGMGYHG-----TVTPTVILRNVLE--NPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT----GLDLA--NASL 146 (954)
T ss_pred ccccccccccC-----CcCcHHHHHHHHh--CchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh----Cchhh--hhhh
Confidence 34567778773 3345555333222 234456777743 32 33444555552 33222 2212
Q ss_pred EeccchhHHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHh----hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 155 VQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
.-++|.+-+.+....+..+ ...+|+|++-.++.+..+++ ..|++++. +++++.+. ..
T Consensus 147 --~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~---~~ 208 (954)
T PRK12566 147 --LDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAA---HA 208 (954)
T ss_pred --ccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCC---CC
Confidence 4566666553321222222 24689999999999888775 45666553 22333232 23
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
...+++.+|| -.|.+ +++++|.++++++|.++|
T Consensus 209 ~~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~ 241 (954)
T PRK12566 209 VFGALLQYPD-THGEI---RDLRPLIDQLHGQQALAC 241 (954)
T ss_pred EEEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEE
Confidence 5666667774 56776 568889999999987755
No 391
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=87.67 E-value=17 Score=34.61 Aligned_cols=218 Identities=14% Similarity=0.111 Sum_probs=109.8
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC--CcchHHHHH---HHHHH-HhcCC
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNK---VTAEL-LFGAD 143 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~---aia~~-l~~~~ 143 (363)
+..+.+.=+..+. .-|.|=.-++ +...+|.+++-..+......+|+. ..|-.++.. .+++- -...+
T Consensus 28 v~~ii~~Ek~RQ~-~gieLIaSEN-------Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF 99 (477)
T KOG2467|consen 28 VHDIIEKEKERQK-RGIELIASEN-------FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAF 99 (477)
T ss_pred HHHHHHHHHHhhh-cceeEeeccc-------chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHh
Confidence 4555543333332 5567664443 235677777766654333233322 112223332 22211 11123
Q ss_pred CCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCC---------CCeEEEecccCCCCC
Q 017967 144 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR---------VPWSEYRYYDPKTVG 213 (363)
Q Consensus 144 ~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G---------~~~~~v~~~~~~~~~ 213 (363)
+.+-+.+.|- +|..+|+.|...+ ..+++.|+|+|.-.+.--.++... +..-+ .+-.+|.++ +.++-
T Consensus 100 ~ldp~kWGVN-VQp~SGSPANfav--Ytall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~-~~TG~ 175 (477)
T KOG2467|consen 100 GLDPEKWGVN-VQPYSGSPANFAV--YTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVD-PSTGY 175 (477)
T ss_pred CCCHHHCcee-eccCCCCchhhHH--HhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeC-CCCCc
Confidence 3333344443 3667888886666 556678999987666433333210 11111 122233443 45778
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC-CCCcCCCCCCchhHHHHHHhc
Q 017967 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATR 292 (363)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~ 292 (363)
+|.|.||+.-.. -++++++-..-..| ..+.-+++++| |.+.|.+++.|.+. +++.-.+.-++ ++ +
T Consensus 176 IDYD~Le~~A~~--frPk~iiaG~SaY~--R~~DYaR~R~I---ad~~gA~Lm~DMAHISgLVAA~vips--PF----e- 241 (477)
T KOG2467|consen 176 IDYDKLEKTATL--FRPKLIIAGTSAYS--RLIDYARFRKI---ADKVGAYLMADMAHISGLVAAGVIPS--PF----E- 241 (477)
T ss_pred eehHHHHHHHHh--cCCcEEEeccccch--hhccHHHHHHH---HHhcCceeehhhhhHHHHHhcccCCC--cc----c-
Confidence 899999987553 24556653222222 33444455554 77889999999996 23332221110 11 1
Q ss_pred CCeEEEEEcCccccccccccceEE
Q 017967 293 GMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 293 ~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
--.|+..+-.|.+ -|-|-|.|
T Consensus 242 -y~DiVTTTTHKsL--RGPRg~mI 262 (477)
T KOG2467|consen 242 -YCDIVTTTTHKSL--RGPRGAMI 262 (477)
T ss_pred -ccceeeccccccc--cCCcceeE
Confidence 1235566667766 47777766
No 392
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=79.68 E-value=44 Score=31.31 Aligned_cols=55 Identities=13% Similarity=0.298 Sum_probs=37.0
Q ss_pred CCCHHHHHHH---HHc-CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 213 GLDFEGMIAD---IKA-APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 213 ~~d~~~l~~~---l~~-~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
.++.+++++. +.. ..+...+++ +.+=|.| ++.+...+|+++|++++..++.|-.=
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~Vvl--sGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVL--SGSLPPG--VPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEE--eCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 4454555443 333 223333333 5666777 46889999999999999999999874
No 393
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=77.89 E-value=8.9 Score=26.97 Aligned_cols=61 Identities=16% Similarity=0.336 Sum_probs=36.0
Q ss_pred chHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEE
Q 017967 189 NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 189 ~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~ 267 (363)
.+...++..|+++..... ..+.++ . .+.+.+++ +|.+. ++ .+++++|.+++++=|.++|.
T Consensus 9 a~~~~L~~~g~~v~~~~~--------~~~~l~----~-~~~tll~i-----~~~~~-~~~~~~~~~l~~~v~~G~~lvl~ 69 (70)
T PF14258_consen 9 ALYQLLEEQGVKVERWRK--------PYEALE----A-DDGTLLVI-----GPDLR-LSEPEEAEALLEWVEAGNTLVLA 69 (70)
T ss_pred HHHHHHHHCCCeeEEecc--------cHHHhC----C-CCCEEEEE-----eCCCC-CCchHHHHHHHHHHHcCCEEEEe
Confidence 344556677888765532 123332 1 23344443 34333 44 59999999999987777776
Q ss_pred e
Q 017967 268 D 268 (363)
Q Consensus 268 D 268 (363)
|
T Consensus 70 a 70 (70)
T PF14258_consen 70 A 70 (70)
T ss_pred C
Confidence 4
No 394
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=76.30 E-value=9.2 Score=36.25 Aligned_cols=90 Identities=10% Similarity=0.079 Sum_probs=53.0
Q ss_pred CHHHHHHHHHcCC--CCcEEEEEcCC-CCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH-
Q 017967 215 DFEGMIADIKAAP--GGSFILLHGCA-HNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF- 289 (363)
Q Consensus 215 d~~~l~~~l~~~~--~~~~~~~i~~p-~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~- 289 (363)
.++++|+.+.+.. +.+++-+|..| +.--| ..-+++-.++|-+++++|++.+|+||+--+-...+ +.|....+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG---k~WaHehw~ 330 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG---KFWAHEHWN 330 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC---ceeeehhcC
Confidence 4566666665522 22444444454 44444 34578889999999999999999999965443322 23332222
Q ss_pred HhcCCeEEEEEcCcccccccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G 310 (363)
++...+++ +|||-|-..|
T Consensus 331 l~~PpD~v---TFSKK~q~gG 348 (484)
T KOG1405|consen 331 LDSPPDVV---TFSKKFQTGG 348 (484)
T ss_pred CCCCccce---ehhhhhhcCc
Confidence 22233333 6788885444
No 395
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=72.33 E-value=58 Score=30.88 Aligned_cols=77 Identities=16% Similarity=0.295 Sum_probs=50.6
Q ss_pred CCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 017967 185 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 264 (363)
Q Consensus 185 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ 264 (363)
-.|+.|.+.++...+.+++++...+ .-.+-..-++.. .+. +++ --|. +++.+|.++|++.|++++ +
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~~--~K~-VL~----EKPl--a~n~~e~~~iveaA~~rg-v 124 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALNK--GKH-VLC----EKPL--AMNVAEAEEIVEAAEARG-V 124 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHHc--CCc-EEe----cccc--cCCHHHHHHHHHHHHHcC-c
Confidence 3789999999999999999986321 123333334442 223 333 3454 467899999999999999 4
Q ss_pred EEEecCCCCCc
Q 017967 265 PFFDVAYQGFA 275 (363)
Q Consensus 265 ii~De~y~~~~ 275 (363)
.+.|..|.-+.
T Consensus 125 ~~meg~~~R~~ 135 (351)
T KOG2741|consen 125 FFMEGLWWRFF 135 (351)
T ss_pred EEEeeeeeecC
Confidence 55555554443
No 396
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=72.22 E-value=58 Score=28.56 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 160 GTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
|..+-.++..++. .+ ...++..+.-......++..|++++..+++ |.+.|.++++. -..++++..+
T Consensus 8 G~~G~~v~~~L~~---~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g---~d~v~~~~~~ 74 (233)
T PF05368_consen 8 GNQGRSVVRALLS---AGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG---VDAVFSVTPP 74 (233)
T ss_dssp SHHHHHHHHHHHH---TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT---CSEEEEESSC
T ss_pred cHHHHHHHHHHHh---CCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC---CceEEeecCc
Confidence 4555555544433 44 344444444223344567789998877652 78999999983 2334443333
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
.++ ...+.-..+++.|++.|+-.++
T Consensus 75 ~~~----~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 75 SHP----SELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp SCC----CHHHHHHHHHHHHHHHT-SEEE
T ss_pred chh----hhhhhhhhHHHhhhccccceEE
Confidence 332 3456778899999998865554
No 397
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=72.17 E-value=8.6 Score=36.41 Aligned_cols=69 Identities=10% Similarity=0.028 Sum_probs=46.0
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
...+...++++..+.+.|+..|.+.++.+.+.-. .+. . .....+.|-.+|.+|+++|++.|++++|-||
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~---~ga--~--~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTE---IGG--S--TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCcccccc---ccc--c--cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 3445567888888887665566666555543221 111 1 1223456778999999999999999998777
No 398
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=71.70 E-value=80 Score=29.20 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=19.9
Q ss_pred CCC--CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 239 HNP--TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 239 ~NP--TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
||| ||..++.+.+.+|++ ..++.-|=|.+
T Consensus 135 n~P~~tg~~l~~~~i~~L~~---~pnv~giK~s~ 165 (290)
T TIGR00683 135 SIPFLTGVNMGIEQFGELYK---NPKVLGVKFTA 165 (290)
T ss_pred eCccccccCcCHHHHHHHhc---CCCEEEEEeCC
Confidence 445 799999998888853 34666666643
No 399
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=71.20 E-value=11 Score=35.10 Aligned_cols=69 Identities=9% Similarity=-0.004 Sum_probs=46.5
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
...+...+.++..+.+.|...|.+..+.+.+.-.. +.. .++ .+.|-.+|++|+++|++.|+++||-||-
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~---g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK---GGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh---ccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 34455778888888886666676665555543331 111 112 2445689999999999999999987773
No 400
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=71.00 E-value=88 Score=28.91 Aligned_cols=26 Identities=19% Similarity=0.268 Sum_probs=18.5
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
||..++.+.+.+|+ +-.|+.-|=|..
T Consensus 142 tg~~l~~~~l~~L~---~~pnvvgiK~s~ 167 (293)
T PRK04147 142 TGVNLSLDQFNELF---TLPKVIGVKQTA 167 (293)
T ss_pred hccCCCHHHHHHHh---cCCCEEEEEeCC
Confidence 79999998888874 334666666653
No 401
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=66.20 E-value=70 Score=28.14 Aligned_cols=93 Identities=24% Similarity=0.341 Sum_probs=56.6
Q ss_pred CCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCC-cchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
...|++ ..||..|..=+ -.++..|..|.+.+|.. +......+..++..+. ...+.+.+.
T Consensus 12 ~k~Vlv--vGgG~va~rKa---~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~--------~~~~~~~~~------- 71 (210)
T COG1648 12 GKKVLV--VGGGSVALRKA---RLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE--------REFDAEDLD------- 71 (210)
T ss_pred CCEEEE--ECCCHHHHHHH---HHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh--------cccChhhhc-------
Confidence 456766 78888887655 33456899999999999 4444455555433322 123444332
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE-EecC
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii-~De~ 270 (363)
+..+++.+..+ .+.=++|++.|+++++++= +|+.
T Consensus 72 -~~~lviaAt~d--------~~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 72 -DAFLVIAATDD--------EELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred -CceEEEEeCCC--------HHHHHHHHHHHHHhCCceeccCCc
Confidence 24455544433 4566789999999886543 4444
No 402
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=65.78 E-value=12 Score=35.73 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=45.2
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
...+..+++++..+.+.|+..|.+.++.+.+.-. .+. ...|-.+|++|+++|++.|++++|-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~---~ga---------~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSK---KGA---------YSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhh---ccC---------cCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 3444567888888887666667776666654332 111 134667899999999999999998777
No 403
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=65.51 E-value=44 Score=31.13 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=33.3
Q ss_pred ccCCcEEEEeccchhHHHHHHHHHHHHhCCCC--EEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd--~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
+.+...++..|+|.| ++-++ +.+.. .|= .+++|+-.-......++.+|.+++.+|-
T Consensus 59 l~pG~tIVE~TSGNT-GI~LA--~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATSGNT-GIALA--MVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcCCChH-HHHHH--HHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 456666555555555 44444 33322 342 3444444445567788999999999985
No 404
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=64.22 E-value=84 Score=30.02 Aligned_cols=170 Identities=15% Similarity=0.177 Sum_probs=78.6
Q ss_pred cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCC--CeEEEecccC-CCCCCCHHHHHHHHHcC
Q 017967 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARV--PWSEYRYYDP-KTVGLDFEGMIADIKAA 226 (363)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~--~~~~v~~~~~-~~~~~d~~~l~~~l~~~ 226 (363)
+|++ .-.|+|+...++ .++++..+..-.+..-.|.... .-++..+. ++........ -+.-++++... +.
T Consensus 70 ~Vlf-lqGGat~qf~~~--p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-- 142 (365)
T COG1932 70 KVLF-LQGGATGQFAMA--PMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-- 142 (365)
T ss_pred eEEE-EcCccHHHHHHH--HHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cC--
Confidence 3433 356778887777 5677654332023334454332 22334443 2222222111 11223443332 22
Q ss_pred CCCcEEEEEcCCCC-CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc
Q 017967 227 PGGSFILLHGCAHN-PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (363)
Q Consensus 227 ~~~~~~~~i~~p~N-PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 305 (363)
++ ..|++-++|+ -+|+-++. ...+. .+.++|+|-. +.....+. .+ ..--++-.|.=|+
T Consensus 143 -~~-~ayv~~~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~S-S~ilsr~i-----Dv------sk~dviyagaQKn 201 (365)
T COG1932 143 -DN-DAYVHFCWNETISGVEVPE--LPDIG-----SDGLLVADAS-SAILSRPI-----DV------SKYDVIYAGAQKN 201 (365)
T ss_pred -CC-ccEEEEecCCcccceEccC--CCCCC-----CCceEEEecc-cHHhcCCC-----Ch------hHcceEEEehhhc
Confidence 22 2233223333 34665552 11110 1267888887 33322211 11 1234667788999
Q ss_pred cccccccceEEEEeeCChhHHHHHHHH-----H----HhhhccccCCCchHHHHHHh
Q 017967 306 LGLYAERIGAMNVVCSSSDLAARVKSQ-----L----KRLARPMYSNPPPMLLGIQL 353 (363)
Q Consensus 306 ~~l~G~RvG~i~~v~~~~~~~~~~~~~-----l----~~~~~~~~~~~s~~~q~~~~ 353 (363)
+|..| ++.+ |.. ++.++|.... + ......++-.||.++-+++.
T Consensus 202 lGpaG--ltvv--Ivr-~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~ 253 (365)
T COG1932 202 LGPAG--LTVV--IVR-PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLG 253 (365)
T ss_pred cCccc--eEEE--EEc-HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHH
Confidence 99888 6666 555 6655544332 0 11124556566666666553
No 405
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=61.69 E-value=15 Score=34.43 Aligned_cols=62 Identities=8% Similarity=0.083 Sum_probs=40.7
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
...+..++.++....+.|+..|.+....+-+.-. .+ ..|-.+|.+|+++|++.|+++||-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~---~g-----------~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQ---KA-----------SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCccccc---cC-----------CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 3344567778877777555556555444332111 11 13556999999999999999998777
No 406
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=60.49 E-value=1.5e+02 Score=27.68 Aligned_cols=104 Identities=18% Similarity=0.128 Sum_probs=58.1
Q ss_pred cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH---HHHhhCCCCeEEEecccCCCCCCCHHHHHHH
Q 017967 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
.+..+-+++ |.||.|-=..+ .+...+.|.++++-+-.=.+.. +-++..| ++..+.+|-.+ .=++..+.+.
T Consensus 35 ~v~g~~vLI--TGgg~GlGr~i--alefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~--~eei~~~a~~ 107 (300)
T KOG1201|consen 35 SVSGEIVLI--TGGGSGLGRLI--ALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISD--REEIYRLAKK 107 (300)
T ss_pred hccCCEEEE--eCCCchHHHHH--HHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCC--HHHHHHHHHH
Confidence 445566666 88888876666 3455567777766554333333 3344446 77777663221 1133444444
Q ss_pred HHcCCCCcEEEEEcCC---CCCCCCCCCHHHHHHHHHH
Q 017967 223 IKAAPGGSFILLHGCA---HNPTGIDPTPEQWEKIADV 257 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p---~NPTG~~~s~~~~~~i~~~ 257 (363)
+++. -+.+-++++|. +.-.....+.+++++..++
T Consensus 108 Vk~e-~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 108 VKKE-VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HHHh-cCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 5442 24555666663 2333455788999886653
No 407
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=60.12 E-value=1.3e+02 Score=28.16 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=69.7
Q ss_pred chHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcC--CCCcchHHHHhhCCCCeE-
Q 017967 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISS--PTWGNHKNIFNDARVPWS- 202 (363)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~--P~y~~~~~~~~~~G~~~~- 202 (363)
...+|.+++.+.... ..-...-|.+...-||.|...++..+-..+ ..|.+|++.+ |..+... ..+|.+..
T Consensus 74 ~~~~l~~~l~~~~~~---~~~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~~~~---~~lg~~~~~ 147 (322)
T TIGR03815 74 AEGWLVELLADLDQS---PPARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGGGLD---LLLGAEDVP 147 (322)
T ss_pred CHHHHHHHHHhhccC---CCCCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCCCee---eeecCCCCC
Confidence 356777777665211 111122333433567777666554443333 3676776654 4433221 12233211
Q ss_pred EEecc--cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 203 EYRYY--DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 203 ~v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.+... ......+|.+.+.+.+.. . ..+.+++.+..+ +..++.+.++++++..+++-=++|+|-.
T Consensus 148 ~~~~~~~~~~~~~~~~~~l~~~~~~-~--~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 148 GLRWPDLSQARGRLPAGALRDALPR-R--GGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLP 213 (322)
T ss_pred CcCHHHHhhcCCCcCHHHHHHhCCC-c--CCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCC
Confidence 01000 011234566667666543 2 235555665544 4557888899999988776568888887
No 408
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=59.02 E-value=1.2e+02 Score=26.38 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=55.8
Q ss_pred CCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC
Q 017967 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (363)
..+|++ ..||..|..-+. .++..|..|.+.+|....-...+...| ++..+.- ....+. +.
T Consensus 9 gk~vlV--vGgG~va~rk~~---~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~------~~~~~d----l~---- 68 (205)
T TIGR01470 9 GRAVLV--VGGGDVALRKAR---LLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR------CFDADI----LE---- 68 (205)
T ss_pred CCeEEE--ECcCHHHHHHHH---HHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC------CCCHHH----hC----
Confidence 456766 788888876663 334567788888887764444444444 4443321 122222 22
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE-EEecC-CCCCc
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVA-YQGFA 275 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i-i~De~-y~~~~ 275 (363)
+..+++ ..+++| +.-.+|+..|+++++++ ++|+. +.+|.
T Consensus 69 ~~~lVi-~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e~~~f~ 109 (205)
T TIGR01470 69 GAFLVI-AATDDE-------ELNRRVAHAARARGVPVNVVDDPELCSFI 109 (205)
T ss_pred CcEEEE-ECCCCH-------HHHHHHHHHHHHcCCEEEECCCcccCeEE
Confidence 233444 455554 33457888999999776 34544 34444
No 409
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=57.99 E-value=80 Score=28.07 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=59.7
Q ss_pred CCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 149 EQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
+.-|++ |.+++|++-.+ +... ...|-.|+-..=.-.+..+.....|+++..+++.++ -.+..++..++..+
T Consensus 7 ~k~VlI--tgcs~GGIG~a--la~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~----~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 7 PKKVLI--TGCSSGGIGYA--LAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKP----EEVVTVSGEVRANP 78 (289)
T ss_pred CCeEEE--eecCCcchhHH--HHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCCh----HHHHHHHHHHhhCC
Confidence 345666 88888887666 3333 348888888888888888888899988888877432 12344455555556
Q ss_pred CCcEEEEEcCCCCCCC
Q 017967 228 GGSFILLHGCAHNPTG 243 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG 243 (363)
.++.=++++|..-|+.
T Consensus 79 ~Gkld~L~NNAG~~C~ 94 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCT 94 (289)
T ss_pred CCceEEEEcCCCCCcc
Confidence 7777788788666653
No 410
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=57.31 E-value=25 Score=28.08 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=42.5
Q ss_pred CCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC---CCCCCCCCCCHHHHHHHHHHHHhcCC
Q 017967 198 RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC---AHNPTGIDPTPEQWEKIADVIQEKNH 263 (363)
Q Consensus 198 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~---p~NPTG~~~s~~~~~~i~~~~~~~~~ 263 (363)
+++++.+|+ .+.+|++.+.+++..- -+-++++=|. +|+..|......+++.+-++..+.|+
T Consensus 28 ~vriIrvpC----~Grv~~~~il~Af~~G-ADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 28 NVRIIRVPC----SGRVDPEFILRAFEKG-ADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CeEEEEccC----CCccCHHHHHHHHHcC-CCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 456777776 4689999999999852 2233333343 45689999888888888777776553
No 411
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=55.71 E-value=84 Score=29.37 Aligned_cols=25 Identities=16% Similarity=0.177 Sum_probs=16.8
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEec
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De 269 (363)
||..++.+.+.+|+ +-.++.=|=|.
T Consensus 147 tg~~l~~~~l~~L~---~~pnivgiKds 171 (309)
T cd00952 147 FKFDFPRAAWAELA---QIPQVVAAKYL 171 (309)
T ss_pred cCCCCCHHHHHHHh---cCCCEEEEEec
Confidence 78999988888774 22355555554
No 412
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=55.42 E-value=2.1e+02 Score=27.99 Aligned_cols=123 Identities=11% Similarity=0.075 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH--hCCCCEEEEcCCCCcchHHHHhhCC--CCeEEE
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER--YFPGAKVLISSPTWGNHKNIFNDAR--VPWSEY 204 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~--~~~gd~Vlv~~P~y~~~~~~~~~~G--~~~~~v 204 (363)
++.++.+.+.+.-.......+...+-++..+--+.+.+...+-.+ -.|+-.|+++..|-.+...+.+.+| +...++
T Consensus 28 ~~y~~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~Yl 107 (419)
T COG1519 28 PKYRKRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYL 107 (419)
T ss_pred hHHHHHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEec
Confidence 567777888764222222222334443433333332233222222 2378889998888888887777777 567777
Q ss_pred ecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 205 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 205 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
|+|. ..-+..+.+.++ + ..+++ +.-|-|--++.-|+++++.++.=++
T Consensus 108 P~D~----~~~v~rFl~~~~---P-~l~Ii-----------~EtElWPnli~e~~~~~~p~~LvNa 154 (419)
T COG1519 108 PLDL----PIAVRRFLRKWR---P-KLLII-----------METELWPNLINELKRRGIPLVLVNA 154 (419)
T ss_pred CcCc----hHHHHHHHHhcC---C-CEEEE-----------EeccccHHHHHHHHHcCCCEEEEee
Confidence 7742 233344443332 2 33333 2346677888889989887776554
No 413
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=53.88 E-value=33 Score=32.81 Aligned_cols=75 Identities=13% Similarity=0.063 Sum_probs=44.2
Q ss_pred HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc-CCCCcEEEE---EcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILL---HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~~~---i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
..+..+++++..+.+.|...|.+.+..+.+.-.. .......+- ...-+.|.|-.+|++|+++|++.|+++||-||
T Consensus 25 d~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 25 DLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 3445677777777775555666665555442211 000000000 00112345778999999999999999998776
No 414
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=53.67 E-value=33 Score=33.97 Aligned_cols=76 Identities=8% Similarity=-0.006 Sum_probs=45.2
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCc-----EEEEEc----CC--CCCCCCCCCHHHHHHHHHHHH
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS-----FILLHG----CA--HNPTGIDPTPEQWEKIADVIQ 259 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-----~~~~i~----~p--~NPTG~~~s~~~~~~i~~~~~ 259 (363)
...+...++++..+.+.|+..|.+.++.+-++-.....+. .-.+.+ .+ ..+.|-.+|.+|+++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 3344566778888877666667776665544322100000 000001 11 123466899999999999999
Q ss_pred hcCCeEE
Q 017967 260 EKNHIPF 266 (363)
Q Consensus 260 ~~~~~ii 266 (363)
+++|-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9998877
No 415
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=53.28 E-value=12 Score=35.37 Aligned_cols=67 Identities=10% Similarity=0.045 Sum_probs=42.8
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
...+...+.++..+.+.|...|.+....+.+.-.. +. . .++.+ |..+|++|+++|++.|+++||-||
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~---ga--~---~~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEK---GA--Y---RPSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHT---TT--E---STTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCcccccc---Cc--c---ccccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 33445788898888887666677666555443331 00 0 11113 449999999999999999998777
No 416
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=52.79 E-value=94 Score=28.87 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=29.1
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
-++.+++.... .-..++++.. |. +.++-++|.++++++|+.++==++.
T Consensus 78 v~~~l~e~~~~--gvk~avI~s~-----Gf--~~~~~~~l~~~a~~~girvlGPNc~ 125 (291)
T PRK05678 78 AADAILEAIDA--GIDLIVCITE-----GI--PVLDMLEVKAYLERKKTRLIGPNCP 125 (291)
T ss_pred HHHHHHHHHHC--CCCEEEEECC-----CC--CHHHHHHHHHHHHHcCCEEECCCCC
Confidence 45666666552 2233444333 22 3455568999999999988865553
No 417
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=51.16 E-value=2e+02 Score=26.36 Aligned_cols=112 Identities=17% Similarity=0.192 Sum_probs=54.5
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCC-CCcc-----hHHHHhhCCCCeEEEecccCCCCCCCHHH----
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSP-TWGN-----HKNIFNDARVPWSEYRYYDPKTVGLDFEG---- 218 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P-~y~~-----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~---- 218 (363)
.+++.+...+|.|=...++.+...+ ..|.+|++.+- .|.. ....++..|+.++.... +.|+..
T Consensus 72 ~~vi~l~G~~G~GKTTt~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~------~~dp~~~~~~ 145 (272)
T TIGR00064 72 PNVILFVGVNGVGKTTTIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKE------GADPAAVAFD 145 (272)
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCC------CCCHHHHHHH
Confidence 3555544555554444444333333 35667665553 2311 12234566644432221 234433
Q ss_pred -HHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHH------hcCCeEEEecC
Q 017967 219 -MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVA 270 (363)
Q Consensus 219 -l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~------~~~~~ii~De~ 270 (363)
++.... ..-..+++-+-+.+++ -..-.+|++++.+.+. ..+++++.|..
T Consensus 146 ~l~~~~~--~~~D~ViIDT~G~~~~-d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~ 201 (272)
T TIGR00064 146 AIQKAKA--RNIDVVLIDTAGRLQN-KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDAT 201 (272)
T ss_pred HHHHHHH--CCCCEEEEeCCCCCcc-hHHHHHHHHHHHHHHhcccCCCCceEEEEEECC
Confidence 222222 1234455544455553 2222356777777777 56788888876
No 418
>PLN02955 8-amino-7-oxononanoate synthase
Probab=51.00 E-value=2.7e+02 Score=27.89 Aligned_cols=158 Identities=11% Similarity=0.044 Sum_probs=85.5
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC--
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-- 197 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-- 197 (363)
..|......+++++++.+-+. ++|......+. ..|-+.....+...++.+...+..++.+-+|.....++...
T Consensus 110 ndYLGL~~~p~v~~a~~~ai~-~yG~g~~gSrl----~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~ 184 (476)
T PLN02955 110 NDYLGLSSHPTISNAAANAAK-EYGMGPKGSAL----ICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGS 184 (476)
T ss_pred cCccCCCCCHHHHHHHHHHHH-HcCCCCCCcCc----cccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhh
Confidence 668888889999999988864 45554333343 34444433334334444544467777777887666655432
Q ss_pred -------------CCC-eEEEecccCCCCCCCHHHHHHHHHcCC-C-CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 198 -------------RVP-WSEYRYYDPKTVGLDFEGMIADIKAAP-G-GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 198 -------------G~~-~~~v~~~~~~~~~~d~~~l~~~l~~~~-~-~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
|-. ++.++ . ..=..+..-++-.. + +..++. .+|| ..++++++++-+++.
T Consensus 185 ~~~~~~~~~~~~~~~~d~i~~D---~----~~HaSI~dG~~ls~~~~~a~~~~--f~HN------D~~~Le~~L~~~~~~ 249 (476)
T PLN02955 185 VASLLAASGKPLKNEKVAIFSD---A----LNHASIIDGVRLAERQGNVEVFV--YRHC------DMYHLNSLLSSCKMK 249 (476)
T ss_pred ccccccccccccCCCCcEEEEe---c----cchHHHHHHHHhccccCCceEEE--eCCC------CHHHHHHHHHhCCCC
Confidence 111 22222 1 11122222222111 1 122332 3565 357888887766666
Q ss_pred CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 262 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 262 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
..+||+|.+|.....- .+...+..+....+-++++.
T Consensus 250 ~~~Vv~EgV~SmdGdi---apL~eL~~L~~~~ga~LiVD 285 (476)
T PLN02955 250 RKVVVTDSLFSMDGDF---APMEELSQLRKKYGFLLVID 285 (476)
T ss_pred ceEEEEeCCCCCCCCc---CCHHHHHHHHHHcCcEEEEc
Confidence 7899999998765432 23344555555445555553
No 419
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=50.73 E-value=78 Score=25.65 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=41.5
Q ss_pred CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhc--CCe-EEEecCCC
Q 017967 210 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEK--NHI-PFFDVAYQ 272 (363)
Q Consensus 210 ~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~--~~~-ii~De~y~ 272 (363)
.+...+++.|.+.+++. ....+++..|-|..|..-+. ...+++++.+++. ++. .++||-|.
T Consensus 34 ~~~~~~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 34 RNREKDIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCCCHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CCCchHHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 34467899999999873 45577778888887765443 4556666655554 664 45899975
No 420
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=49.78 E-value=28 Score=35.88 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=31.2
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
||...=++++++++++-|.++||-+|.|=+|..|..+
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 4444447999999999999999999999999888653
No 421
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=48.46 E-value=64 Score=26.46 Aligned_cols=55 Identities=18% Similarity=0.269 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHH-HHHHHHHHHHhc-CC-eEEEecC
Q 017967 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEK-NH-IPFFDVA 270 (363)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~-~~~~i~~~~~~~-~~-~ii~De~ 270 (363)
.+++.+.+.+++. ....+++..|.|..|...+.. ..+++++..+++ ++ +++.||-
T Consensus 40 ~~~~~l~~li~~~--~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDFNALLKLVKEY--QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhHHHHHHHHHHh--CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 5899999998874 455777799999999888854 356677666643 54 4457776
No 422
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=48.09 E-value=1.8e+02 Score=24.94 Aligned_cols=103 Identities=11% Similarity=0.104 Sum_probs=42.6
Q ss_pred cEEEEeccchhHHHHHHHHHHHHhC---CCCEEEEcCCCCcchHHHHhhC--CCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 151 RVATVQGLSGTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
.++-++..+.-+...+.. ++..+. |+-.|+++..+-.++..+.+.+ ++.+.++|+| .-.....+.+.++
T Consensus 22 ~~iWiHa~SvGE~~a~~~-Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~D----~~~~~~rfl~~~~- 95 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARP-LIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPLD----FPWAVRRFLDHWR- 95 (186)
T ss_dssp T-EEEE-SSHHHHHHHHH-HHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE---S----SHHHHHHHHHHH--
T ss_pred CcEEEEECCHHHHHHHHH-HHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCcc----CHHHHHHHHHHhC-
Confidence 455545444333333332 333332 6788998888877777665543 5667777763 2233455555554
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE-EecCCCC
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVAYQG 273 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii-~De~y~~ 273 (363)
+ ..++++ .-|=|-.++..|+++|+.++ ++.-..+
T Consensus 96 --P-~~~i~~-----------EtElWPnll~~a~~~~ip~~LvNarls~ 130 (186)
T PF04413_consen 96 --P-DLLIWV-----------ETELWPNLLREAKRRGIPVVLVNARLSE 130 (186)
T ss_dssp ----SEEEEE-----------S----HHHHHH-----S-EEEEEE----
T ss_pred --C-CEEEEE-----------ccccCHHHHHHHhhcCCCEEEEeeeecc
Confidence 2 334442 34678889999999997665 4444333
No 423
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=47.69 E-value=2.7e+02 Score=27.79 Aligned_cols=130 Identities=12% Similarity=0.045 Sum_probs=78.8
Q ss_pred CcchHHHHHHHHHHHhcCCC-----------CcccCCcEEEEeccchhHHHHHHHHHHHHhCCC--CEEEEcC--CCCcc
Q 017967 125 IEGLAAFNKVTAELLFGADN-----------SVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGN 189 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~-----------~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g--d~Vlv~~--P~y~~ 189 (363)
..+-.+|+..|-+|+..+.. ..+....+++ |-|....++.+ ++....-| =+|+|.+ |.+.+
T Consensus 324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdvil--tyg~s~vV~~i--ll~A~~~~k~frVvVVDSRP~~EG 399 (556)
T KOG1467|consen 324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLL--TYGSSSVVNMI--LLEAKELGKKFRVVVVDSRPNLEG 399 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEE--EecchHHHHHH--HHHHHHhCcceEEEEEeCCCCcch
Confidence 34455666666666543211 1244567766 89999998888 44443333 3444433 66654
Q ss_pred h--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE-
Q 017967 190 H--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF- 266 (363)
Q Consensus 190 ~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii- 266 (363)
- ...+...|+++.++-+. .+ +.+. . +-+++++=++.---.|.+|++.--..++-++..+|+.+|
T Consensus 400 ~~~lr~Lv~~GinctYv~I~-----a~--syim---~---evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlV 466 (556)
T KOG1467|consen 400 RKLLRRLVDRGINCTYVLIN-----AA--SYIM---L---EVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLV 466 (556)
T ss_pred HHHHHHHHHcCCCeEEEEeh-----hH--HHHH---H---hcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEE
Confidence 3 33455789998888762 11 1221 2 235566645544456999998888888888899998766
Q ss_pred EecCC
Q 017967 267 FDVAY 271 (363)
Q Consensus 267 ~De~y 271 (363)
+-|.|
T Consensus 467 CCE~y 471 (556)
T KOG1467|consen 467 CCEAY 471 (556)
T ss_pred Eechh
Confidence 45665
No 424
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=45.46 E-value=1.4e+02 Score=27.50 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHhcCC-eEEEecCCC
Q 017967 247 TPEQWEKIADVIQEKNH-IPFFDVAYQ 272 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~-~ii~De~y~ 272 (363)
+-+..++.+++|.++|+ ++++|+=|.
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvlvD~GW~ 56 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVLVDAGWY 56 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEEEBTTCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccccc
Confidence 56677777777777774 556677765
No 425
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=45.38 E-value=1.3e+02 Score=22.56 Aligned_cols=70 Identities=7% Similarity=-0.060 Sum_probs=44.0
Q ss_pred CCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE
Q 017967 186 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (363)
Q Consensus 186 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 265 (363)
....|...++..|++.+.. .. .....-....|+..+.. ...++++++.. +-+-...+-+.|+++++.+
T Consensus 11 ~~~~~~~~~~~~G~~~~~h-g~-~~~~~~~~~~l~~~i~~---aD~VIv~t~~v-------sH~~~~~vk~~akk~~ip~ 78 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH-GR-DGGDEKKASRLPSKIKK---ADLVIVFTDYV-------SHNAMWKVKKAAKKYGIPI 78 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE-ec-CCCCccchhHHHHhcCC---CCEEEEEeCCc-------ChHHHHHHHHHHHHcCCcE
Confidence 4466788889999998887 21 22222233347777763 33444434332 3456777888899999887
Q ss_pred EE
Q 017967 266 FF 267 (363)
Q Consensus 266 i~ 267 (363)
+.
T Consensus 79 ~~ 80 (97)
T PF10087_consen 79 IY 80 (97)
T ss_pred EE
Confidence 75
No 426
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=44.55 E-value=2.4e+02 Score=27.76 Aligned_cols=107 Identities=11% Similarity=0.094 Sum_probs=51.6
Q ss_pred cEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCC-CCc-ch----HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 151 RVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSP-TWG-NH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P-~y~-~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
+++.+...+|.|=..+++.+...+ ..|.+|.+.+. +|. .. ....+..|+.+... .+++.+.+.+
T Consensus 242 ~vI~LVGptGvGKTTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL 312 (436)
T PRK11889 242 QTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRAL 312 (436)
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHH
Confidence 444444556655444444443333 36656654443 332 12 22233455554432 2456666666
Q ss_pred HcCC---CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh---cCCeEEEecC
Q 017967 224 KAAP---GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE---KNHIPFFDVA 270 (363)
Q Consensus 224 ~~~~---~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~---~~~~ii~De~ 270 (363)
.... +...+++-+-+.|+. +.+.+.++.++.++ +.++++.|..
T Consensus 313 ~~lk~~~~~DvVLIDTaGRs~k----d~~lm~EL~~~lk~~~PdevlLVLsAT 361 (436)
T PRK11889 313 TYFKEEARVDYILIDTAGKNYR----ASETVEEMIETMGQVEPDYICLTLSAS 361 (436)
T ss_pred HHHHhccCCCEEEEeCccccCc----CHHHHHHHHHHHhhcCCCeEEEEECCc
Confidence 4321 224555544455552 34445555555543 4567777765
No 427
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=43.91 E-value=2.2e+02 Score=25.22 Aligned_cols=49 Identities=12% Similarity=0.010 Sum_probs=29.2
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
..+|+.+..++... ..+.-.-.|+++.-.-..-...++.+|++++.++-
T Consensus 56 ~ssGN~g~alA~~a-~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 56 STGGNTGIALAAAA-ARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred eCCcHHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 55677776666322 22222234555555545556677899999988863
No 428
>smart00642 Aamy Alpha-amylase domain.
Probab=43.23 E-value=33 Score=28.92 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++.|+++|+-+|.|-++....
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 96 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHTS 96 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 46999999999999999999999965543
No 429
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=42.89 E-value=1.8e+02 Score=23.55 Aligned_cols=56 Identities=9% Similarity=-0.034 Sum_probs=28.7
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
.++..|++++.+-. ...++++.++..+. ++.++.++.-.. ......+++++.+++.
T Consensus 26 ~lr~~G~eVi~LG~------~vp~e~i~~~a~~~--~~d~V~lS~~~~-----~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 26 ALTEAGFEVINLGV------MTSQEEFIDAAIET--DADAILVSSLYG-----HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHCCCEEEECCC------CCCHHHHHHHHHHc--CCCEEEEcCccc-----cCHHHHHHHHHHHHhc
Confidence 44566777766643 34556666665542 233333333222 1345556666666655
No 430
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=42.70 E-value=73 Score=30.35 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=42.6
Q ss_pred CCCEEEEcCCCCc-chHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 176 PGAKVLISSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 176 ~gd~Vlv~~P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
++.+|++.+.+.- +..+.+...|+++..+|+ ..+++++.+ -+| ..+++-+-|.+|.-.....+.++++
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~------~t~~eeIl~---~~p--DGiflSNGPGDP~~~~~~i~~ik~l 246 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPA------DTSAEEILA---LNP--DGIFLSNGPGDPAPLDYAIETIKEL 246 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcC------CCCHHHHHh---hCC--CEEEEeCCCCChhHHHHHHHHHHHH
Confidence 4567888877764 566677789999999997 245666543 222 3456555599995444333333333
No 431
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=42.38 E-value=28 Score=27.23 Aligned_cols=59 Identities=12% Similarity=0.173 Sum_probs=29.0
Q ss_pred CCC-CEEEEcCCCC--------cchHHHHhhCCCCeEEEecccCCCCCCC---HHHHHHHHHcCCCCcEEEEEcCC
Q 017967 175 FPG-AKVLISSPTW--------GNHKNIFNDARVPWSEYRYYDPKTVGLD---FEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 175 ~~g-d~Vlv~~P~y--------~~~~~~~~~~G~~~~~v~~~~~~~~~~d---~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
..| ++|+.-.|.- ......++..|+.++.+|+... .++ ++.|.+++...++ + ++++|--
T Consensus 25 ~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~---~~~~~~v~~f~~~l~~~~~-P-vl~hC~s 95 (110)
T PF04273_consen 25 AQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGG---AITEEDVEAFADALESLPK-P-VLAHCRS 95 (110)
T ss_dssp HCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TT---T--HHHHHHHHHHHHTTTT-S-EEEE-SC
T ss_pred HCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCC---CCCHHHHHHHHHHHHhCCC-C-EEEECCC
Confidence 356 6677766553 2345678899999999998532 454 4555566666543 4 4554553
No 432
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=41.51 E-value=1.6e+02 Score=22.52 Aligned_cols=21 Identities=24% Similarity=0.257 Sum_probs=11.6
Q ss_pred CHHHHHHHHHHHHhcCCeEEE
Q 017967 247 TPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~ 267 (363)
+.++.++|.+.+++++..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 455566666666655555443
No 433
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=41.27 E-value=1.6e+02 Score=22.55 Aligned_cols=66 Identities=12% Similarity=0.129 Sum_probs=40.5
Q ss_pred HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc--CCeEEEec
Q 017967 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDV 269 (363)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~De 269 (363)
..++..|.++..++. ..+.+++.+.+.+...+ ++.++.. ...+.....++++..++. ++.+++=.
T Consensus 22 ~~l~~~G~~v~~~d~------~~~~~~l~~~~~~~~pd--~V~iS~~-----~~~~~~~~~~l~~~~k~~~p~~~iv~GG 88 (121)
T PF02310_consen 22 AYLRKAGHEVDILDA------NVPPEELVEALRAERPD--VVGISVS-----MTPNLPEAKRLARAIKERNPNIPIVVGG 88 (121)
T ss_dssp HHHHHTTBEEEEEES------SB-HHHHHHHHHHTTCS--EEEEEES-----SSTHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHCCCeEEEECC------CCCHHHHHHHHhcCCCc--EEEEEcc-----CcCcHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 345678998888865 24558888777664332 3333222 223467788888888776 67777744
Q ss_pred C
Q 017967 270 A 270 (363)
Q Consensus 270 ~ 270 (363)
.
T Consensus 89 ~ 89 (121)
T PF02310_consen 89 P 89 (121)
T ss_dssp S
T ss_pred C
Confidence 3
No 434
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=41.11 E-value=1.7e+02 Score=26.87 Aligned_cols=146 Identities=19% Similarity=0.229 Sum_probs=85.2
Q ss_pred cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCC--------CCEEEEcCCC---CcchHHHH
Q 017967 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP--------GAKVLISSPT---WGNHKNIF 194 (363)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~--------gd~Vlv~~P~---y~~~~~~~ 194 (363)
.|+...-+.+.+.+.+.. -.| ..|-=.+-++.++....-...- .|.|++-+-- .+....++
T Consensus 107 SGIAT~T~~~V~~~~~~~------~~i--~~TRKT~PglR~leKyAV~~GGG~nHR~gLsDavliKDNHia~~g~i~~Av 178 (280)
T COG0157 107 SGIATATARMVEALRGTN------VRI--ADTRKTTPGLRLLEKYAVRAGGGDNHRFGLSDAVLIKDNHIAAAGSITEAV 178 (280)
T ss_pred hhHHHHHHHHHHHhhccC------cEE--EeccCCCccHHHHHHHHHHhcCCccccCCCcceEEehhhHHHHhccHHHHH
Confidence 366655565555544431 233 3366666666665433222222 2678877631 12233333
Q ss_pred h----hCCCCe-EEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEec
Q 017967 195 N----DARVPW-SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (363)
Q Consensus 195 ~----~~G~~~-~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 269 (363)
+ ..+... ++|.++ +++++++++.. +.-++.+-| ++++++++.++++..++-.+++
T Consensus 179 ~~aR~~~~~~~kIEVEve-------sle~~~eAl~a---gaDiImLDN--------m~~e~~~~av~~l~~~~~~~lE-- 238 (280)
T COG0157 179 RRARAAAPFTKKIEVEVE-------SLEEAEEALEA---GADIIMLDN--------MSPEELKEAVKLLGLAGRALLE-- 238 (280)
T ss_pred HHHHHhCCCCceEEEEcC-------CHHHHHHHHHc---CCCEEEecC--------CCHHHHHHHHHHhccCCceEEE--
Confidence 2 234333 666652 68899999985 333555555 6789999999987555544443
Q ss_pred CCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 270 AYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 270 ~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
+-.+. ....++.+...+.++|.++.+++..
T Consensus 239 aSGgI-------t~~ni~~yA~tGVD~IS~galths~ 268 (280)
T COG0157 239 ASGGI-------TLENIREYAETGVDVISVGALTHSA 268 (280)
T ss_pred EeCCC-------CHHHHHHHhhcCCCEEEeCccccCC
Confidence 22232 2447778888889999998887754
No 435
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=40.82 E-value=3.2e+02 Score=25.89 Aligned_cols=94 Identities=15% Similarity=0.102 Sum_probs=54.1
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEE--EEcCCCCc------chHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKV--LISSPTWG------NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~V--lv~~P~y~------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
..+||-.+..++..+...+ |..+ +..++.|. +....++..|+....+.. +.+.+.+....
T Consensus 65 ~lSGGkDSs~la~ll~~~~--gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~~-- 132 (343)
T TIGR03573 65 GVSGGKDSTYQAHVLKKKL--GLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQRA-- 132 (343)
T ss_pred ECCCCHHHHHHHHHHHHHh--CCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHHH--
Confidence 3788888877764433333 3332 45566664 345566678998877764 44444443321
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEe
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 268 (363)
. +- +..+|...+. ......+.++|+++|+.+|..
T Consensus 133 --~-~~---~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~ 166 (343)
T TIGR03573 133 --Y-FK---KVGDPEWPQD-HAIFASVYQVALKFNIPLIIW 166 (343)
T ss_pred --H-Hh---ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEe
Confidence 0 01 2234443332 344667889999999987764
No 436
>PRK14723 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=40.32 E-value=3.5e+02 Score=28.90 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHHhcCC--CCcccCCcEEEEeccchhHHHHHHHHHHHHh--CCC-CEEEEcC-CCCc-chHH----HHhh
Q 017967 128 LAAFNKVTAELLFGAD--NSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG-AKVLISS-PTWG-NHKN----IFND 196 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~--~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~~g-d~Vlv~~-P~y~-~~~~----~~~~ 196 (363)
...+++.+.+.+.... ...+...+|+.+..+.|.|=..++..+...+ ..| ++|.+.. -+|. +..+ ..+.
T Consensus 161 ~~~l~~~L~~~l~il~~~~~~~~~g~Vi~lVGpnGvGKTTTiaKLA~~~~~~~G~kkV~lit~Dt~RigA~eQL~~~a~~ 240 (767)
T PRK14723 161 MAWIRNELATHLPVLRDEDALLAQGGVLALVGPTGVGKTTTTAKLAARCVAREGADQLALLTTDSFRIGALEQLRIYGRI 240 (767)
T ss_pred HHHHHHHHHHHhhhccCCCcccCCCeEEEEECCCCCcHHHHHHHHHhhHHHHcCCCeEEEecCcccchHHHHHHHHHHHh
Confidence 3345555555442211 1123335676655555555444444444333 344 4665443 3442 1222 2335
Q ss_pred CCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC
Q 017967 197 ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (363)
Q Consensus 197 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~ 272 (363)
.|+.+..+ .+++.+.+.+....+...++|-+-+-||.-.. -.+++..|.+......+++|.|..++
T Consensus 241 ~gvpv~~~---------~~~~~l~~al~~~~~~D~VLIDTAGRs~~d~~-l~eel~~l~~~~~p~e~~LVLsAt~~ 306 (767)
T PRK14723 241 LGVPVHAV---------KDAADLRFALAALGDKHLVLIDTVGMSQRDRN-VSEQIAMLCGVGRPVRRLLLLNAASH 306 (767)
T ss_pred CCCCcccc---------CCHHHHHHHHHHhcCCCEEEEeCCCCCccCHH-HHHHHHHHhccCCCCeEEEEECCCCc
Confidence 55544321 25677777777654445555544343443211 12333333333334568888888753
No 437
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=40.26 E-value=1.8e+02 Score=27.55 Aligned_cols=114 Identities=20% Similarity=0.281 Sum_probs=64.0
Q ss_pred cEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCC-CCcc-----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 151 RVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSP-TWGN-----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P-~y~~-----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
.|+++....|+|=...++.+...+ ..|.+|++..- ||-. .....++.|+.++.-+. ..+.-.+-++.++.+.
T Consensus 140 ~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~-G~DpAaVafDAi~~Ak 218 (340)
T COG0552 140 FVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKE-GADPAAVAFDAIQAAK 218 (340)
T ss_pred EEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCC-CCCcHHHHHHHHHHHH
Confidence 455545555666555555544444 37877776654 5522 12234588988877542 1111223456666665
Q ss_pred HcCCCCcEEEEEcC--CCCCCCCCCCHHHHHHHHHHHHhcC------CeEEEecC
Q 017967 224 KAAPGGSFILLHGC--AHNPTGIDPTPEQWEKIADVIQEKN------HIPFFDVA 270 (363)
Q Consensus 224 ~~~~~~~~~~~i~~--p~NPTG~~~s~~~~~~i~~~~~~~~------~~ii~De~ 270 (363)
.+ .-.++++-+- -||-+.. -+|+++|.+++++.. ++++.|..
T Consensus 219 ar--~~DvvliDTAGRLhnk~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 219 AR--GIDVVLIDTAGRLHNKKNL---MDELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred Hc--CCCEEEEeCcccccCchhH---HHHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 53 3344444322 2554443 378999999998865 55666776
No 438
>PRK04296 thymidine kinase; Provisional
Probab=39.64 E-value=2.4e+02 Score=24.04 Aligned_cols=113 Identities=12% Similarity=0.025 Sum_probs=62.0
Q ss_pred CCCCEEEEcCCCCcc---hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHH
Q 017967 175 FPGAKVLISSPTWGN---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQW 251 (363)
Q Consensus 175 ~~gd~Vlv~~P~y~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~ 251 (363)
..|.+|++..|.+.. ...++...|+++..+.. ...+.+.+.+.+......++++-..+ .++.+++
T Consensus 28 ~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEaq-----~l~~~~v 95 (190)
T PRK04296 28 ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEAQ-----FLDKEQV 95 (190)
T ss_pred HcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEccc-----cCCHHHH
Confidence 468888888774332 33345566655443322 12333333333211233455555654 3667778
Q ss_pred HHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 252 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 252 ~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
.++++.++..++.+|+=.--.+|... .+.....+....+.++.+...-
T Consensus 96 ~~l~~~l~~~g~~vi~tgl~~~~~~~----~f~~~~~L~~~aD~V~~l~~vC 143 (190)
T PRK04296 96 VQLAEVLDDLGIPVICYGLDTDFRGE----PFEGSPYLLALADKVTELKAIC 143 (190)
T ss_pred HHHHHHHHHcCCeEEEEecCcccccC----cCchHHHHHHhcCeEEEeeEEc
Confidence 89999988899888875554444322 1223334445556776665543
No 439
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=39.44 E-value=2e+02 Score=28.83 Aligned_cols=66 Identities=18% Similarity=0.084 Sum_probs=37.8
Q ss_pred HhhCC-CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc--CCeEEEecC
Q 017967 194 FNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVA 270 (363)
Q Consensus 194 ~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~De~ 270 (363)
++..| .++..++.. ...++.+.+.+.+.+...+ ++.++. .+.+.....++++.+++. ++.+|+=..
T Consensus 32 L~~~G~~~V~iiD~~---~~~~~~~~~~~~l~~~~pd--vVgis~------~t~~~~~a~~~~~~~k~~~P~~~iV~GG~ 100 (497)
T TIGR02026 32 LLDAGYHDVTFLDAM---TGPLTDEKLVERLRAHCPD--LVLITA------ITPAIYIACETLKFARERLPNAIIVLGGI 100 (497)
T ss_pred HHhcCCcceEEeccc---ccCCCHHHHHHHHHhcCcC--EEEEec------CcccHHHHHHHHHHHHHHCCCCEEEEcCC
Confidence 45677 567666542 3356667777777653222 333322 223456667777777765 777776444
No 440
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=39.29 E-value=97 Score=28.22 Aligned_cols=68 Identities=12% Similarity=0.027 Sum_probs=32.9
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
+++..+++...+..+.+.+.+.+++...- .+..++- .+-..++-.....+.+.+.++.+.++|+++|.
T Consensus 75 a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN-~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~ 143 (267)
T cd07476 75 CRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHIIN-ISGGRLTQTGEADPILANAVAMCQQNNVLIVA 143 (267)
T ss_pred CeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEE-ecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 34555554333333334444444443211 2333433 33232322223345677777778888888876
No 441
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=38.73 E-value=1.8e+02 Score=27.50 Aligned_cols=123 Identities=13% Similarity=0.120 Sum_probs=61.5
Q ss_pred CCcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 149 EQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
..+++.+....|+|=..++..++... ..|..|+..+.-.......++..|+.+..+-+..++...--++.++..++.
T Consensus 54 ~G~iteI~G~~GsGKTtLaL~~~~~~~~~g~~v~yId~E~~~~~~~a~~lGvd~~~l~v~~p~~~eq~l~~~~~li~~-- 131 (321)
T TIGR02012 54 RGRIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYARKLGVDIDNLLVSQPDTGEQALEIAETLVRS-- 131 (321)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEcccchhHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhc--
Confidence 55666555566666666654433332 467676666655555555677788764433332221111112333333332
Q ss_pred CCcEEEEEcCCCCCC---------CCCC--CH-----HHHHHHHHHHHhcCCeEE-EecCCCC
Q 017967 228 GGSFILLHGCAHNPT---------GIDP--TP-----EQWEKIADVIQEKNHIPF-FDVAYQG 273 (363)
Q Consensus 228 ~~~~~~~i~~p~NPT---------G~~~--s~-----~~~~~i~~~~~~~~~~ii-~De~y~~ 273 (363)
....++++-+-.+-. |... .. ..+.+|...++++|+.+| ..++|..
T Consensus 132 ~~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQvr~~ 194 (321)
T TIGR02012 132 GAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIFINQIREK 194 (321)
T ss_pred cCCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEEEecceec
Confidence 234455555533211 1110 01 245668888899997555 5565543
No 442
>PRK09354 recA recombinase A; Provisional
Probab=38.47 E-value=2.1e+02 Score=27.32 Aligned_cols=122 Identities=13% Similarity=0.112 Sum_probs=62.5
Q ss_pred CCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 149 EQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
..+|+.+....|+|=..++..++.. ...|..++..+.-.......++..|+.+..+-+..++...--++.++..+++
T Consensus 59 ~G~IteI~G~~GsGKTtLal~~~~~~~~~G~~~~yId~E~s~~~~~a~~lGvdld~lli~qp~~~Eq~l~i~~~li~s-- 136 (349)
T PRK09354 59 RGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADTLVRS-- 136 (349)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhc--
Confidence 5566654556666666565444332 2467777766666655566778888875444332221111112333333432
Q ss_pred CCcEEEEEcCCCCCC---------CCC-C-CHHH-----HHHHHHHHHhcCCeEE-EecCCC
Q 017967 228 GGSFILLHGCAHNPT---------GID-P-TPEQ-----WEKIADVIQEKNHIPF-FDVAYQ 272 (363)
Q Consensus 228 ~~~~~~~i~~p~NPT---------G~~-~-s~~~-----~~~i~~~~~~~~~~ii-~De~y~ 272 (363)
....++++-+-..-. |.. . ...+ +.+|...++++|+.+| ...++.
T Consensus 137 ~~~~lIVIDSvaaL~~~~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~tNQvr~ 198 (349)
T PRK09354 137 GAVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVIFINQIRE 198 (349)
T ss_pred CCCCEEEEeChhhhcchhhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEEEEEeeee
Confidence 234455555533211 100 0 1122 6678888899997655 455554
No 443
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=38.24 E-value=3.1e+02 Score=24.96 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=18.0
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
||..++.+.+++|++ ..++.-|=|..
T Consensus 138 ~g~~ls~~~~~~L~~---~p~v~giK~s~ 163 (284)
T cd00950 138 TGVNIEPETVLRLAE---HPNIVGIKEAT 163 (284)
T ss_pred hCCCCCHHHHHHHhc---CCCEEEEEECC
Confidence 799999888888754 34666665543
No 444
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=37.85 E-value=2e+02 Score=22.56 Aligned_cols=56 Identities=7% Similarity=-0.007 Sum_probs=31.0
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
.++..|.+++.... ...++++.+...+. ++.++.+|.-. + ...+..+++++.+++.
T Consensus 22 ~l~~~G~~vi~lG~------~vp~e~~~~~a~~~--~~d~V~iS~~~-~----~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 22 ALRDAGFEVIYTGL------RQTPEEIVEAAIQE--DVDVIGLSSLS-G----GHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHCCCEEEECCC------CCCHHHHHHHHHHc--CCCEEEEcccc-h----hhHHHHHHHHHHHHhc
Confidence 35677777776643 24556665555542 23344444432 1 2355667777777765
No 445
>PLN02417 dihydrodipicolinate synthase
Probab=37.78 E-value=3.2e+02 Score=24.99 Aligned_cols=35 Identities=29% Similarity=0.269 Sum_probs=21.9
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
+++.++|+ -||..++.+.+++|+ +-.++.-|=|..
T Consensus 128 i~lYn~P~-~tg~~l~~~~l~~l~---~~pni~giKdss 162 (280)
T PLN02417 128 TIIYNVPG-RTGQDIPPEVIFKIA---QHPNFAGVKECT 162 (280)
T ss_pred EEEEEChh-HhCcCCCHHHHHHHh---cCCCEEEEEeCC
Confidence 33333443 379999999888875 334566666654
No 446
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=37.61 E-value=37 Score=32.04 Aligned_cols=26 Identities=8% Similarity=0.059 Sum_probs=23.2
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
+.+-.+|++|+++|++.|+++||-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45778999999999999999998776
No 447
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=37.20 E-value=2.8e+02 Score=26.69 Aligned_cols=81 Identities=12% Similarity=-0.039 Sum_probs=42.7
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEc
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~ 236 (363)
..+|+.++.++... +.+.---.|+++.-.-..-...++.+|.+++.++- ..+.+-..+...+.+++. .-.++++
T Consensus 117 aSsGN~G~alA~~a-~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~--~~~~~~~~~~a~~l~~~~---~~~~~~~ 190 (368)
T PLN02556 117 PTSGNMGISLAFMA-AMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP--TKGMGGTVKKAYELLEST---PDAFMLQ 190 (368)
T ss_pred eCCchHHHHHHHHH-HHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CCCccHHHHHHHHHHHhc---CCCCccC
Confidence 67888887776321 22222134555554445556678899999988763 111122344444444432 2234434
Q ss_pred CCCCCCC
Q 017967 237 CAHNPTG 243 (363)
Q Consensus 237 ~p~NPTG 243 (363)
..+||-+
T Consensus 191 q~~np~~ 197 (368)
T PLN02556 191 QFSNPAN 197 (368)
T ss_pred CCCCHHH
Confidence 4457643
No 448
>PLN02565 cysteine synthase
Probab=37.05 E-value=3.2e+02 Score=25.63 Aligned_cols=82 Identities=9% Similarity=-0.084 Sum_probs=43.3
Q ss_pred CCCCCcchHHHHHHHHHHHhcCCCCcccCC--cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCC
Q 017967 121 EYLPIEGLAAFNKVTAELLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR 198 (363)
Q Consensus 121 ~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~--~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G 198 (363)
+|..+.|....|-+..-+........+.+. .|+. ..+|+.+..++.. -+.+.---.|+++.-.-..-...++.+|
T Consensus 37 E~~nPtGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~--aSsGN~g~alA~~-a~~~G~~~~ivvp~~~~~~k~~~i~~~G 113 (322)
T PLN02565 37 EMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIE--PTSGNTGIGLAFM-AAAKGYKLIITMPASMSLERRIILLAFG 113 (322)
T ss_pred cccCCccchHHHHHHHHHHHHHHcCCCCCCCcEEEE--ECCChHHHHHHHH-HHHcCCeEEEEeCCCCcHHHHHHHHHcC
Confidence 455566765666444332211111111122 2544 6788888777632 2222222345555545555577888999
Q ss_pred CCeEEEe
Q 017967 199 VPWSEYR 205 (363)
Q Consensus 199 ~~~~~v~ 205 (363)
.+++.++
T Consensus 114 A~V~~~~ 120 (322)
T PLN02565 114 AELVLTD 120 (322)
T ss_pred CEEEEeC
Confidence 9998875
No 449
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=36.76 E-value=2.2e+02 Score=26.08 Aligned_cols=124 Identities=15% Similarity=0.071 Sum_probs=56.9
Q ss_pred CCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEE---EcCCCCcchHHHHhhCC
Q 017967 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL---ISSPTWGNHKNIFNDAR 198 (363)
Q Consensus 122 Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vl---v~~P~y~~~~~~~~~~G 198 (363)
|....|..+..+.+++.+... .-++++ +.|...+..+. ......-.|+ +.+|...+.......-|
T Consensus 38 ~~~a~~d~~~~~~~~~~l~~~------~~DlIi--~~gt~aa~~~~----~~~~~~iPVVf~~V~dp~~~~l~~~~~~~~ 105 (294)
T PF04392_consen 38 YKNAEGDPEKLRQIARKLKAQ------KPDLII--AIGTPAAQALA----KHLKDDIPVVFCGVSDPVGAGLVDSLDRPG 105 (294)
T ss_dssp EEE-TT-HHHHHHHHHHHCCT------S-SEEE--EESHHHHHHHH----HH-SS-S-EEEECES-TTTTTS-S-SSS--
T ss_pred EecCCCCHHHHHHHHHHHhcC------CCCEEE--EeCcHHHHHHH----HhcCCCcEEEEEeccChhhhhccccccCCC
Confidence 334556666666666665443 235655 56665553333 2222212333 33455555544444445
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHc-CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
-++.++-. ..+++.-.+.+++ .|....+.++.+++.++ +....+.+.+.++++|+-++.
T Consensus 106 ~nvTGv~~------~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~----~~~~~~~~~~~a~~~g~~l~~ 165 (294)
T PF04392_consen 106 KNVTGVSE------RPPIEKQLELIKKLFPDAKRIGVLYDPSEPN----SVAQIEQLRKAAKKLGIELVE 165 (294)
T ss_dssp SSEEEEEE---------HHHHHHHHHHHSTT--EEEEEEETT-HH----HHHHHHHHHHHHHHTT-EEEE
T ss_pred CCEEEEEC------CcCHHHHHHHHHHhCCCCCEEEEEecCCCcc----HHHHHHHHHHHHHHcCCEEEE
Confidence 57777752 2344444444443 34434454445555543 256677788888888877654
No 450
>PRK04302 triosephosphate isomerase; Provisional
Probab=36.65 E-value=2.9e+02 Score=24.21 Aligned_cols=13 Identities=15% Similarity=-0.028 Sum_probs=7.9
Q ss_pred HHhhCCCCeEEEe
Q 017967 193 IFNDARVPWSEYR 205 (363)
Q Consensus 193 ~~~~~G~~~~~v~ 205 (363)
.++..|+..+-++
T Consensus 80 ~l~~~G~~~vii~ 92 (223)
T PRK04302 80 AVKDAGAVGTLIN 92 (223)
T ss_pred HHHHcCCCEEEEe
Confidence 4455677666665
No 451
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=36.65 E-value=28 Score=23.97 Aligned_cols=47 Identities=19% Similarity=0.386 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
+.+|.+-..++ ++ +..|.+...+.++++++.+-..+.+.+.+.+..|
T Consensus 12 l~l~RIh~mLk-------mf----~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 12 LPLDRIHSMLK-------MF----PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp EEHHHHHHHHH-------HH-----GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred CCHHHHHHHHH-------hc----cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 45566666665 12 3467888899999999999888888887777666
No 452
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=36.63 E-value=1.6e+02 Score=23.86 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=39.0
Q ss_pred CCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhc-C-CeEEEecCCCC
Q 017967 213 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEK-N-HIPFFDVAYQG 273 (363)
Q Consensus 213 ~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~-~-~~ii~De~y~~ 273 (363)
..+.+.|.+.+++. ....+++..|-|..|..-+. ...+++++.++++ + -+.++||-|.-
T Consensus 40 ~~~~~~l~~~i~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~TT 101 (138)
T PRK00109 40 TPDWDRLEKLIKEW--QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLST 101 (138)
T ss_pred chHHHHHHHHHHHh--CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 34678888888763 34567779999998886432 4455566555443 4 35668998643
No 453
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=36.56 E-value=3.4e+02 Score=24.84 Aligned_cols=29 Identities=34% Similarity=0.509 Sum_probs=18.5
Q ss_pred CCC--CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 239 HNP--TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 239 ~NP--TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
|+| ||..++.+.+.+|++ -.++.=|=|..
T Consensus 134 n~P~~tg~~ls~~~l~~L~~---~~nv~giK~s~ 164 (289)
T PF00701_consen 134 NNPARTGNDLSPETLARLAK---IPNVVGIKDSS 164 (289)
T ss_dssp EBHHHHSSTSHHHHHHHHHT---STTEEEEEESS
T ss_pred ECCCccccCCCHHHHHHHhc---CCcEEEEEcCc
Confidence 455 788888887777644 23566555544
No 454
>PLN02970 serine racemase
Probab=35.99 E-value=3.7e+02 Score=25.20 Aligned_cols=54 Identities=15% Similarity=-0.075 Sum_probs=34.9
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
..|+. ..+|+.++.++.. ...+.-.-.|+++.-+...-...++.+|.+++.++-
T Consensus 76 ~~vv~--aSsGN~g~alA~~-a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 76 KGVVT--HSSGNHAAALALA-AKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred CeEEE--ECCcHHHHHHHHH-HHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 34655 7788888777632 222322246777766655556778899999998863
No 455
>PRK08246 threonine dehydratase; Provisional
Probab=35.59 E-value=3.7e+02 Score=25.01 Aligned_cols=75 Identities=13% Similarity=-0.006 Sum_probs=45.3
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
.+.|....|-++........ ....|+. ..+|+.+..++.. -..+.-.-.|+++...-..-...++.+|.+++.
T Consensus 47 nptGS~K~R~a~~~~~~~~~----~~~~vv~--aSsGN~g~a~A~~-a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~ 119 (310)
T PRK08246 47 QHTGSFKARGAFNRLLAAPV----PAAGVVA--ASGGNAGLAVAYA-AAALGVPATVFVPETAPPAKVARLRALGAEVVV 119 (310)
T ss_pred CCCCCCHHHHHHHHHHhhcc----cCCeEEE--eCCCHHHHHHHHH-HHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEE
Confidence 44666666665554432221 2345655 7778888777632 222333346677666555566778899999988
Q ss_pred Ee
Q 017967 204 YR 205 (363)
Q Consensus 204 v~ 205 (363)
++
T Consensus 120 ~~ 121 (310)
T PRK08246 120 VG 121 (310)
T ss_pred eC
Confidence 75
No 456
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=35.34 E-value=2.5e+02 Score=22.96 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=38.7
Q ss_pred hHHHHhhC-CCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEe
Q 017967 190 HKNIFNDA-RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (363)
Q Consensus 190 ~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 268 (363)
....++.. |+++..+ ..++. +-+ ..+.+.+.+ +.+-++++.| .|+|......+-..|.+.|-++++.++..
T Consensus 41 Ta~~L~~~~Gi~v~~v-i~~~~--gg~-~~i~~~I~~---g~i~lVInt~-dp~~~~~~~~D~~~IRR~Av~~~IP~~T~ 112 (142)
T PRK05234 41 TGGLIQEATGLDVTRL-LSGPL--GGD-QQIGALIAE---GKIDMLIFFR-DPLTAQPHDPDVKALLRLADVWNIPVATN 112 (142)
T ss_pred HHHHHHhccCCeeEEE-EcCCC--CCc-hhHHHHHHc---CceeEEEEec-CCCCCCcccchHHHHHHHHHHcCCCEEcC
Confidence 34445555 8877666 32221 123 345555663 3444444443 12333322456667888899999988763
No 457
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=35.12 E-value=2.1e+02 Score=22.06 Aligned_cols=56 Identities=9% Similarity=0.032 Sum_probs=31.6
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
.++..|.+++.+.. ...++++.+.+.+.. +.++.++.- +. .......++++.+++.
T Consensus 22 ~l~~~G~~V~~lg~------~~~~~~l~~~~~~~~--pdvV~iS~~-~~----~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 22 ALRDAGFEVIDLGV------DVPPEEIVEAAKEED--ADAIGLSGL-LT----THMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHCCCEEEECCC------CCCHHHHHHHHHHcC--CCEEEEecc-cc----ccHHHHHHHHHHHHHc
Confidence 45677777755532 356777777666532 223333332 11 2346777777777765
No 458
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=34.92 E-value=2.4e+02 Score=23.23 Aligned_cols=53 Identities=13% Similarity=0.186 Sum_probs=32.8
Q ss_pred hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 017967 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (363)
Q Consensus 196 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~ 263 (363)
..+++++..++ .|.+.+.+++.. .-.++.+.+.++. .....+.+++.|++.++
T Consensus 38 ~~~~~~~~~d~-------~d~~~~~~al~~----~d~vi~~~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 38 SPGVEIIQGDL-------FDPDSVKAALKG----ADAVIHAAGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp CTTEEEEESCT-------TCHHHHHHHHTT----SSEEEECCHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred ccccccceeee-------hhhhhhhhhhhh----cchhhhhhhhhcc----ccccccccccccccccc
Confidence 44555554433 477899998873 2234434433333 26778889999998876
No 459
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=34.82 E-value=2e+02 Score=23.30 Aligned_cols=60 Identities=12% Similarity=0.018 Sum_probs=39.1
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~ 263 (363)
...++..|++++.+.. ...++++.++..+. ++-++.+++-. | -+.+.++++.+.++++++
T Consensus 22 ~~~l~~~GfeVi~LG~------~v~~e~~v~aa~~~--~adiVglS~l~---~--~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 22 DHAFTNAGFNVVNLGV------LSPQEEFIKAAIET--KADAILVSSLY---G--HGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHHc--CCCEEEEeccc---c--cCHHHHHHHHHHHHHCCC
Confidence 3456788999988865 35677777776653 33355544433 2 235678888888888764
No 460
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=34.80 E-value=35 Score=31.05 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++.|+++|+-||.|-++.....
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~~ 79 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTSD 79 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEET
T ss_pred hhhhhhhhhhccccccceEEEeeecccccc
Confidence 479999999999999999999999875554
No 461
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=34.57 E-value=3.5e+02 Score=25.01 Aligned_cols=47 Identities=13% Similarity=0.045 Sum_probs=28.2
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
-++.+++.... ....++++.. + ++..+-++|.++++++|+.++==++
T Consensus 76 v~~~l~e~~~~--Gvk~avIis~-G------f~e~~~~~l~~~a~~~girilGPNc 122 (286)
T TIGR01019 76 AADAIFEAIDA--GIELIVCITE-G------IPVHDMLKVKRYMEESGTRLIGPNC 122 (286)
T ss_pred HHHHHHHHHHC--CCCEEEEECC-C------CCHHHHHHHHHHHHHcCCEEECCCC
Confidence 35666666552 2233444333 2 2344557899999999998875555
No 462
>PLN03013 cysteine synthase
Probab=34.51 E-value=3.6e+02 Score=26.61 Aligned_cols=82 Identities=6% Similarity=-0.109 Sum_probs=44.3
Q ss_pred CCCCCcchHHHHHHHHHHHhcCCCCcccCC--cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCC
Q 017967 121 EYLPIEGLAAFNKVTAELLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR 198 (363)
Q Consensus 121 ~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~--~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G 198 (363)
+|..+.|....|-+..-.........+.+. .|+. ..+|+.++.++.. -..+.-.-.|++++-.-..-...++.+|
T Consensus 145 E~lNPtGSfKdR~A~~~l~~a~~~G~l~pG~~~VVe--aSSGN~G~ALA~~-a~~~G~~~~VvvP~~~s~~K~~~ira~G 221 (429)
T PLN03013 145 EIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVE--PTSGNTGIGLAFI-AASRGYRLILTMPASMSMERRVLLKAFG 221 (429)
T ss_pred ccCCCccccHHHHHHHHHHHHHHcCCcCCCCcEEEE--ECCcHHHHHHHHH-HHHcCCCEEEEECCCCcHHHHHHHHHcC
Confidence 344556765555444333221111112233 2433 6778888766632 1222222456666655566677889999
Q ss_pred CCeEEEe
Q 017967 199 VPWSEYR 205 (363)
Q Consensus 199 ~~~~~v~ 205 (363)
++++.++
T Consensus 222 AeVi~v~ 228 (429)
T PLN03013 222 AELVLTD 228 (429)
T ss_pred CEEEEEC
Confidence 9999885
No 463
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=34.43 E-value=51 Score=28.03 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=25.5
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF 274 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~ 274 (363)
|..++.+.++.|.+..++++++|+.|--|.+.
T Consensus 30 Gs~i~~~~i~~i~~~~~~rgVIIfTDpD~~Ge 61 (174)
T TIGR00334 30 GSALKDETINLIKKAQKKQGVIILTDPDFPGE 61 (174)
T ss_pred CCccCHHHHHHHHHHhhcCCEEEEeCCCCchH
Confidence 55568888888888888889999998876654
No 464
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=34.18 E-value=44 Score=26.98 Aligned_cols=49 Identities=18% Similarity=0.121 Sum_probs=31.3
Q ss_pred HHHhhCCCCeEEEecccCCCCCCC---HHHHHHHHHcCCCCcEEEEEcCCCCCCCCC
Q 017967 192 NIFNDARVPWSEYRYYDPKTVGLD---FEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (363)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d---~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~ 245 (363)
..+...|++++.+|+.. ..++ .+.|.+.+... +++ ++++|.-.+=||..
T Consensus 51 ~~a~~~gl~y~~iPv~~---~~~~~~~v~~f~~~~~~~-~~p-vL~HC~sG~Rt~~l 102 (135)
T TIGR01244 51 AAAEAAGVTYHHQPVTA---GDITPDDVETFRAAIGAA-EGP-VLAYCRSGTRSSLL 102 (135)
T ss_pred HHHHHCCCeEEEeecCC---CCCCHHHHHHHHHHHHhC-CCC-EEEEcCCChHHHHH
Confidence 45567899999999853 2344 45555566643 334 67778766666653
No 465
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=34.14 E-value=4.1e+02 Score=25.08 Aligned_cols=128 Identities=13% Similarity=0.051 Sum_probs=72.8
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcC---CCCcchHHHHhh
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS---PTWGNHKNIFND 196 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~---P~y~~~~~~~~~ 196 (363)
..|....|.....+.+++-+... ..++++ +.++..|--++ ... .+-.|++.. |--......++.
T Consensus 65 i~~~na~~~~~~a~~iarql~~~------~~dviv--~i~tp~Aq~~~----s~~-~~iPVV~aavtd~v~a~Lv~~~~~ 131 (322)
T COG2984 65 IDYQNAQGDLGTAAQIARQLVGD------KPDVIV--AIATPAAQALV----SAT-KTIPVVFAAVTDPVGAKLVKSLEQ 131 (322)
T ss_pred EEeecCCCChHHHHHHHHHhhcC------CCcEEE--ecCCHHHHHHH----Hhc-CCCCEEEEccCchhhccCCccccC
Confidence 45667778888888888887665 235655 56666553333 211 222333332 322223333445
Q ss_pred CCCCeEEEecccCCCCCCCHHHHHHHHHc-CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 197 ARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 197 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
-|.++.++. ...+.++-.++++. .|.-..+-++.+|+-+ -+...++++-+.+++.|+-+++=.+
T Consensus 132 pg~NvTGvs------D~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~----ns~~l~eelk~~A~~~Gl~vve~~v 196 (322)
T COG2984 132 PGGNVTGVS------DLLPVAQQIELIKALLPNAKSIGVLYNPGEA----NSVSLVEELKKEARKAGLEVVEAAV 196 (322)
T ss_pred CCCceeecC------CcchHHHHHHHHHHhCCCCeeEEEEeCCCCc----ccHHHHHHHHHHHHHCCCEEEEEec
Confidence 566777663 12345544444443 2333444455666544 3577889999999999999887444
No 466
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=33.77 E-value=3.4e+02 Score=24.11 Aligned_cols=137 Identities=14% Similarity=0.130 Sum_probs=82.0
Q ss_pred eccchhHHHHHHHHHHHHhCCCCE---EEEcCCC----C----cch---HHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAK---VLISSPT----W----GNH---KNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~---Vlv~~P~----y----~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
..+||..+...+ ......|-. +++.-|. | ++. ...++..|+.++..... ....-..+++.+
T Consensus 6 L~SGGKDS~~Al---~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~--g~~e~eve~L~~ 80 (223)
T COG2102 6 LYSGGKDSFYAL---YLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTS--GEEEREVEELKE 80 (223)
T ss_pred EEecCcHHHHHH---HHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecC--ccchhhHHHHHH
Confidence 378999886555 333445532 2222221 2 222 22446789998888763 223446788888
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
+++.-. .-.++ +|.+++..++..+=.+|++.|+.. |.++...+ +..-...++..+-+.+++..
T Consensus 81 ~l~~l~--~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~-----~~PLWg~d---~~ell~e~~~~Gf~~~Iv~V 143 (223)
T COG2102 81 ALRRLK--VDGIV-------AGAIASEYQKERVERLCEELGLKV-----YAPLWGRD---PEELLEEMVEAGFEAIIVAV 143 (223)
T ss_pred HHHhCc--ccEEE-------EchhhhHHHHHHHHHHHHHhCCEE-----eecccCCC---HHHHHHHHHHcCCeEEEEEE
Confidence 887421 22333 599999999999999999999864 45655432 23345556677667766654
Q ss_pred CccccccccccceEE
Q 017967 302 YSKNLGLYAERIGAM 316 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i 316 (363)
|| .|++..=+|.-
T Consensus 144 -sa-~gL~~~~lGr~ 156 (223)
T COG2102 144 -SA-EGLDESWLGRR 156 (223)
T ss_pred -ec-cCCChHHhCCc
Confidence 33 34444335555
No 467
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=33.75 E-value=3.7e+02 Score=24.48 Aligned_cols=106 Identities=15% Similarity=0.280 Sum_probs=59.0
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
++++|.+.+. .+..+.+.....+||. +-++++.....+-+ +|+|.=-+.|. + ...-...+.+.+.
T Consensus 49 sl~el~~~L~---~pr~vWlMvPag~it~-----~vi~~la~~L~~GD--ivIDGGNS~y~--D---s~rr~~~l~~kgi 113 (300)
T COG1023 49 SLDELVAKLS---APRIVWLMVPAGDITD-----AVIDDLAPLLSAGD--IVIDGGNSNYK--D---SLRRAKLLAEKGI 113 (300)
T ss_pred CHHHHHHhcC---CCcEEEEEccCCCchH-----HHHHHHHhhcCCCC--EEEECCccchH--H---HHHHHHHHHhcCC
Confidence 3455555544 3455555544455764 45666666665544 44554322221 1 0112222444444
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhc
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLAR 338 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~ 338 (363)
+.+=+++ +=|+.|.|-||...|..+++..+++..-++.+..
T Consensus 114 ~flD~GT---SGG~~G~~~G~~lMiGG~~~a~~~~~pif~~lA~ 154 (300)
T COG1023 114 HFLDVGT---SGGVWGAERGYCLMIGGDEEAVERLEPIFKALAP 154 (300)
T ss_pred eEEeccC---CCCchhhhcCceEEecCcHHHHHHHHHHHHhhCc
Confidence 4443333 3467789999988899988888887777776653
No 468
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=33.27 E-value=3.8e+02 Score=24.49 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=16.9
Q ss_pred CCCCCCHHHHHHHHHHHHhc-CCeEEEec
Q 017967 242 TGIDPTPEQWEKIADVIQEK-NHIPFFDV 269 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~-~~~ii~De 269 (363)
||..++.+.+.+|+ +.+ ++.=|=|.
T Consensus 133 tg~~l~~~~l~~L~---~~~p~vvgiK~s 158 (279)
T cd00953 133 TGYDINARMAKEIK---KAGGDIIGVKDT 158 (279)
T ss_pred cCCCCCHHHHHHHH---hcCCCEEEEEeC
Confidence 89999998877774 333 55555553
No 469
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=32.55 E-value=4.9e+02 Score=25.56 Aligned_cols=131 Identities=17% Similarity=0.202 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh---CCCCEEEEcC-CCCcc-----hHHHHhhCCC
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPGAKVLISS-PTWGN-----HKNIFNDARV 199 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~---~~gd~Vlv~~-P~y~~-----~~~~~~~~G~ 199 (363)
..+++.+++.+.......+...+++.+..++|.|=..+++.+...+ ..|.+|.+.+ -+|.. .....+..|+
T Consensus 200 ~~~~~~L~~~l~~~~~~~~~~~~~i~~vGptGvGKTTt~~kLA~~~~~~~~g~~V~li~~D~~r~~a~eqL~~~a~~~~v 279 (424)
T PRK05703 200 RYLLELLANMIPVRVEDILKQGGVVALVGPTGVGKTTTLAKLAARYALLYGKKKVALITLDTYRIGAVEQLKTYAKIMGI 279 (424)
T ss_pred HHHHHHHHHHhCccccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCccHHHHHHHHHHHHHHhCC
Confidence 3455555555533221112334566655666655554444433322 3455555443 23321 1122334554
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHH----hcCCeEEEecCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ----EKNHIPFFDVAYQ 272 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~----~~~~~ii~De~y~ 272 (363)
.+... .+.+.+.+.+........+++ -.|.... .....+.++.++.+ ....++|.+..+.
T Consensus 280 p~~~~---------~~~~~l~~~l~~~~~~DlVlI-Dt~G~~~---~d~~~~~~L~~ll~~~~~~~~~~LVl~a~~~ 343 (424)
T PRK05703 280 PVEVV---------YDPKELAKALEQLRDCDVILI-DTAGRSQ---RDKRLIEELKALIEFSGEPIDVYLVLSATTK 343 (424)
T ss_pred ceEcc---------CCHHhHHHHHHHhCCCCEEEE-eCCCCCC---CCHHHHHHHHHHHhccCCCCeEEEEEECCCC
Confidence 43222 234556666654333344444 4443321 23344444444444 2245777776543
No 470
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=31.86 E-value=6.3e+02 Score=26.57 Aligned_cols=92 Identities=10% Similarity=0.044 Sum_probs=50.4
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh----CCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
.--||.|-+.+..+ .....+.+++|..-+++.....++. +|++++. .|+++..... +....
T Consensus 186 LDEgTAaaEAm~l~-~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~----------~~~~~~~~s~----~~v~g 250 (1001)
T KOG2040|consen 186 LDEGTAAAEAMALC-NRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVV----------SDIKEADYSS----KDVSG 250 (1001)
T ss_pred hccchhHHHHHHHH-HhhcccceEEecCCCCcchhhhhhccccccceeEEe----------cCHHHhhccc----cceeE
Confidence 34456655555322 2334667899999999999888762 2333222 2333222211 22444
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
+++..|. --|.+.+ +.++++.+++.+.+++.
T Consensus 251 vlvQYP~-t~G~i~d---~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 251 VLVQYPD-TEGSVLD---FDELVELAHANGSLVVM 281 (1001)
T ss_pred EEEEcCC-CCCcccC---HHHHHHHhhccCceEEE
Confidence 5555554 3465554 55566678888766554
No 471
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=31.35 E-value=1.1e+02 Score=27.86 Aligned_cols=67 Identities=9% Similarity=0.007 Sum_probs=0.0
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc---CCeEEE
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK---NHIPFF 267 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~---~~~ii~ 267 (363)
+.....|+ .+++.+|.+.+++.++..-+.-+=-++.+.++==+..++.+|++++++.+.+. ++.+|+
T Consensus 2 ~~a~~TPf--~~dg~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~ 71 (281)
T cd00408 2 IPALVTPF--TADGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA 71 (281)
T ss_pred CCCeeCCc--CCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE
No 472
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=31.11 E-value=5.1e+02 Score=25.25 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=42.1
Q ss_pred CCCEEEEcCCCCcchHH---------HHhhCCCCeEE-EecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC
Q 017967 176 PGAKVLISSPTWGNHKN---------IFNDARVPWSE-YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~---------~~~~~G~~~~~-v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~ 245 (363)
+||.|+...+.++++.. .+.+.|+++.. +.+ ...-+-+++.+.++.-+++.++-+ + |
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~----SgHa~~~dl~~~i~~~~Pk~~ipv--H-----g-- 384 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV----SGHASQEDHKLLLRLLKPKYIIPV--H-----G-- 384 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe----cCCCCHHHHHHHHHHhCCCEEEec--C-----C--
Confidence 67899999988887661 12346666543 222 345667777776664322222222 1 1
Q ss_pred CCHHHHHHHHHHHHhcCC
Q 017967 246 PTPEQWEKIADVIQEKNH 263 (363)
Q Consensus 246 ~s~~~~~~i~~~~~~~~~ 263 (363)
....+.+.++++++.|+
T Consensus 385 -e~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 385 -EYRMLINHTKLAEEEGY 401 (422)
T ss_pred -cHHHHHHHHHHHHHcCC
Confidence 13466677777776653
No 473
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins.
Probab=30.84 E-value=1.4e+02 Score=29.12 Aligned_cols=44 Identities=14% Similarity=0.250 Sum_probs=31.7
Q ss_pred CCCHHHHHHHHHcC----CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 017967 213 GLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (363)
Q Consensus 213 ~~d~~~l~~~l~~~----~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~ 262 (363)
.++.+++++.+.+- ..+.-++.+.+|| +|.+|+++|+++++.++
T Consensus 269 ~i~~~dl~~~~~~l~~~~~~~~D~V~lGcPH------~S~~El~~ia~ll~gr~ 316 (400)
T PF04412_consen 269 TITDADLEEVYEELNTAGDEKVDLVALGCPH------LSLEELREIAELLEGRK 316 (400)
T ss_pred EeCHHHHHHHHHHhccCCCCCCCEEEECCCC------CCHHHHHHHHHHHhCCC
Confidence 34556666555442 2345688889999 78999999999998765
No 474
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=30.59 E-value=56 Score=33.77 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=29.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+|+.|++ ..++++++++-|+++|+-||.|-+|....
T Consensus 220 ~p~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 220 NPYDPAT---RIRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCCccch---HHHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 3455543 36899999999999999999999986553
No 475
>smart00857 Resolvase Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.
Probab=30.56 E-value=2.8e+02 Score=22.10 Aligned_cols=21 Identities=5% Similarity=0.044 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHHHhcCCeEEE
Q 017967 247 TPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~ 267 (363)
+..++.++++.++++|+.|++
T Consensus 80 ~~~~~~~~~~~l~~~gi~l~~ 100 (148)
T smart00857 80 SLRDLLALLELLEKKGVRLVS 100 (148)
T ss_pred cHHHHHHHHHHHHHCCCEEEE
Confidence 566778888888888876664
No 476
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=30.48 E-value=1.1e+02 Score=26.96 Aligned_cols=51 Identities=16% Similarity=0.003 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 216 ~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
.+.++++++ .+..++-+-.-+..+-.. .+..+++.++|++|++.+|+++-+
T Consensus 24 ~~~ve~al~---~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~ 74 (211)
T COG0352 24 LEWVEAALK---GGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRV 74 (211)
T ss_pred HHHHHHHHh---CCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcH
Confidence 678888887 344455444433333211 456688999999999999887763
No 477
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=30.40 E-value=3.1e+02 Score=26.23 Aligned_cols=74 Identities=11% Similarity=0.020 Sum_probs=43.4
Q ss_pred EEEEcCCCCcchHHHHhh-CCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHH
Q 017967 179 KVLISSPTWGNHKNIFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV 257 (363)
Q Consensus 179 ~Vlv~~P~y~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~ 257 (363)
.|++.+-.-......++. .+.++..+.++ -.|.+.+.+.++. ..+++.+.|.. .-..+++.
T Consensus 25 ~v~va~r~~~~~~~~~~~~~~~~~~~~~~d-----~~~~~~l~~~~~~----~dvVin~~gp~---------~~~~v~~~ 86 (386)
T PF03435_consen 25 EVTVADRNPEKAERLAEKLLGDRVEAVQVD-----VNDPESLAELLRG----CDVVINCAGPF---------FGEPVARA 86 (386)
T ss_dssp EEEEEESSHHHHHHHHT--TTTTEEEEE-------TTTHHHHHHHHTT----SSEEEE-SSGG---------GHHHHHHH
T ss_pred cEEEEECCHHHHHHHHhhccccceeEEEEe-----cCCHHHHHHHHhc----CCEEEECCccc---------hhHHHHHH
Confidence 788888777766666654 55566666553 2477888888873 34666444322 23467777
Q ss_pred HHhcCCeEEEecCC
Q 017967 258 IQEKNHIPFFDVAY 271 (363)
Q Consensus 258 ~~~~~~~ii~De~y 271 (363)
|.+.++.. +|-+|
T Consensus 87 ~i~~g~~y-vD~~~ 99 (386)
T PF03435_consen 87 CIEAGVHY-VDTSY 99 (386)
T ss_dssp HHHHT-EE-EESS-
T ss_pred HHHhCCCe-eccch
Confidence 88888764 44333
No 478
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=30.28 E-value=47 Score=25.52 Aligned_cols=48 Identities=15% Similarity=0.100 Sum_probs=25.5
Q ss_pred HHHHHHHcCCCCcEEEEEcCCCCCCCC------CCCHHHHHHHHHHHHhcCCeEEE
Q 017967 218 GMIADIKAAPGGSFILLHGCAHNPTGI------DPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 218 ~l~~~l~~~~~~~~~~~i~~p~NPTG~------~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
.|..++.+.+....+| +.|.||--. ..+..+.++|+++|+++++-+++
T Consensus 14 Aia~~l~~s~~v~~v~--~aPGN~G~~~~~~~~~~~~~d~~~l~~~a~~~~idlvv 67 (100)
T PF02844_consen 14 AIAWKLSQSPSVEEVY--VAPGNPGTAELGKNVPIDITDPEELADFAKENKIDLVV 67 (100)
T ss_dssp HHHHHHTTCTTEEEEE--EEE--TTGGGTSEEE-S-TT-HHHHHHHHHHTTESEEE
T ss_pred HHHHHHhcCCCCCEEE--EeCCCHHHHhhceecCCCCCCHHHHHHHHHHcCCCEEE
Confidence 4445555433323344 456677211 23577889999999998765554
No 479
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=30.17 E-value=3.4e+02 Score=22.94 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=44.2
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHH-HHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD-IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~-l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
...++..|.+++...++..+-...+.+.+.+. +....++.+++++.+- +...+.+.+..|++.++++|.-++
T Consensus 113 ~~~l~~~G~~~v~w~~~~~D~~~~~~~~i~~~~~~~~~~g~Iil~Hd~~----~~~~t~~~l~~~i~~l~~~Gy~~v 185 (191)
T TIGR02764 113 LKAAESLGYTVVHWSVDSRDWKNPGVESIVDRVVKNTKPGDIILLHASD----SAKQTVKALPTIIKKLKEKGYEFV 185 (191)
T ss_pred HHHHHHcCCeEEEecCCCCccCCCCHHHHHHHHHhcCCCCCEEEEeCCC----CcHhHHHHHHHHHHHHHHCCCEEE
Confidence 45667889988877764333234566665543 3333345666664321 223457889999999999886544
No 480
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=30.06 E-value=2.3e+02 Score=25.94 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=26.5
Q ss_pred HHHHHHHHHHh--CCCCE-EEEcCCCCcchHHHHhhCCCCeE
Q 017967 164 LRLAAALIERY--FPGAK-VLISSPTWGNHKNIFNDARVPWS 202 (363)
Q Consensus 164 l~l~~~l~~~~--~~gd~-Vlv~~P~y~~~~~~~~~~G~~~~ 202 (363)
-+++-.+++.+ .|+|. |-|.+..|++|...+.++|+-.+
T Consensus 212 ~eilE~LmN~l~~~p~DpYv~i~~~~WPpyie~LlR~GIa~r 253 (268)
T PF11802_consen 212 REILEILMNKLLDSPHDPYVKIDDSFWPPYIELLLRSGIALR 253 (268)
T ss_pred HHHHHHHHHHhcCCCCCCceecCcccChHHHHHHHHcCCeee
Confidence 34444445554 38886 55555569999999999998654
No 481
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=29.62 E-value=4.9e+02 Score=24.66 Aligned_cols=102 Identities=12% Similarity=0.057 Sum_probs=52.0
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH---Hc
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI---KA 225 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l---~~ 225 (363)
..+++.-|+=...+..++ ..+. +-=+|.-.+-.|.++...+...|-.+ -+.. +--+.+++++++ ++
T Consensus 102 ~Gi~~~SSPfd~~svd~l----~~~~~~ayKIaS~E~~~~plik~iA~~~kPi-IlST-----Gma~~~ei~~av~~~r~ 171 (347)
T COG2089 102 RGIIFFSSPFDLTAVDLL----ESLNPPAYKIASGEINDLPLIKYIAKKGKPI-ILST-----GMATIEEIEEAVAILRE 171 (347)
T ss_pred cCeEEEecCCCHHHHHHH----HhcCCCeEEecCccccChHHHHHHHhcCCCE-EEEc-----ccccHHHHHHHHHHHHh
Confidence 455554455555554443 2233 22344444456666666555555433 2221 223455555544 33
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~ 263 (363)
...+..+++.|.-..|+-.- .-.+..|.++..+.|+
T Consensus 172 ~g~~~i~LLhC~s~YPap~e--d~NL~~i~~l~~~Fn~ 207 (347)
T COG2089 172 NGNPDIALLHCTSAYPAPFE--DVNLKAIPKLAEAFNA 207 (347)
T ss_pred cCCCCeEEEEecCCCCCCHH--HhhHHHHHHHHHHhCC
Confidence 33445677777777776533 4456666666666654
No 482
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=29.13 E-value=3.7e+02 Score=25.58 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=37.8
Q ss_pred CCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 017967 185 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 264 (363)
Q Consensus 185 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ 264 (363)
|.|..+.+++..-.+.++.++..-+ .+.-.+...++++. ++-+++ --|-. .+|.+++++.|+++|+.
T Consensus 51 ~~y~~~eell~d~Di~~V~ipt~~P--~~~H~e~a~~aL~a---GkHVL~----EKPla----~~Ea~el~~~A~~~g~~ 117 (343)
T TIGR01761 51 PLYCEVEELPDDIDIACVVVRSAIV--GGQGSALARALLAR---GIHVLQ----EHPLH----PRDIQDLLRLAERQGRR 117 (343)
T ss_pred CccCCHHHHhcCCCEEEEEeCCCCC--CccHHHHHHHHHhC---CCeEEE----cCCCC----HHHHHHHHHHHHHcCCE
Confidence 3566677666544444555542101 12224444555552 333333 34443 47888888888888877
Q ss_pred EEE
Q 017967 265 PFF 267 (363)
Q Consensus 265 ii~ 267 (363)
+.+
T Consensus 118 l~v 120 (343)
T TIGR01761 118 YLV 120 (343)
T ss_pred EEE
Confidence 776
No 483
>PLN03244 alpha-amylase; Provisional
Probab=28.98 E-value=1e+02 Score=32.78 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=34.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
+.--|+...-++++++++++.|.++|+-+|.|-+|..+..+
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 44456666778999999999999999999999999766543
No 484
>PF12427 DUF3665: Branched-chain amino acid aminotransferase ; InterPro: IPR024614 This uncharacterised domain is found in the N-terminal region of branched-chain amino acid aminotransferase II proteins in Corynebacterium. It is typically between 23 and 35 amino acids in length and contains a conserved TRT sequence motif.
Probab=28.86 E-value=88 Score=16.77 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=13.3
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHH
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
+.+..-+||| +.+++.+|+
T Consensus 4 yTiTRT~nPT----s~~~L~eIL 22 (23)
T PF12427_consen 4 YTITRTENPT----SPERLKEIL 22 (23)
T ss_pred eeEeccCCCC----CHHHHHHHh
Confidence 4455668898 478888874
No 485
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=28.75 E-value=3.6e+02 Score=22.83 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=50.8
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
.+.-|+...|-+..+...++..|+....+-.-...+..-.+..+|++++...-..++.. -|+ .++.+++++|-
T Consensus 59 ~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~W--Lp~-----~l~~~~lRRLq 131 (168)
T TIGR00623 59 QSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGW--LTD-----ELTEEEHAKLV 131 (168)
T ss_pred cCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEec--CCc-----cCCHHHHHHHH
Confidence 56677777788888999999999976555321111222346889999986322222222 132 25678888876
Q ss_pred HHHHhcCCeEE
Q 017967 256 DVIQEKNHIPF 266 (363)
Q Consensus 256 ~~~~~~~~~ii 266 (363)
-.++.-+.+.|
T Consensus 132 lAA~~G~al~f 142 (168)
T TIGR00623 132 RAAEEGNAMGF 142 (168)
T ss_pred HHHHhCCCeEE
Confidence 66665554333
No 486
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=28.60 E-value=70 Score=26.33 Aligned_cols=63 Identities=16% Similarity=0.059 Sum_probs=45.3
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
..|+|-....+..++..+.++..+++..|+=+.+...+...|+..+.--. -.|.+.+.+.+.+
T Consensus 68 iTGsTlvN~Ti~~iL~~~~~~~~vil~GpS~~~~P~~l~~~Gv~~v~g~~------v~d~~~~~~~i~~ 130 (147)
T PF04016_consen 68 ITGSTLVNGTIDDILELARNAREVILYGPSAPLHPEALFDYGVTYVGGSR------VVDPEKVLRAISE 130 (147)
T ss_dssp EECHHCCTTTHHHHHHHTTTSSEEEEESCCGGS-GGGGCCTT-SEEEEEE------ES-HHHHHHHHCT
T ss_pred EEeeeeecCCHHHHHHhCccCCeEEEEecCchhhHHHHHhCCCCEEEEEE------EeCHHHHHHHHHc
Confidence 46666555566666777777899999999999888899999998765433 2478888887765
No 487
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed
Probab=28.38 E-value=3.1e+02 Score=26.34 Aligned_cols=75 Identities=13% Similarity=0.055 Sum_probs=42.3
Q ss_pred CCEEEEcCCCCc-chHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 177 GAKVLISSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 177 gd~Vlv~~P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
|.+|++.+.+.. ++.+.++..|+.++.+|.+ .+++++.+ + +...+++-+-|.+|... +...+++
T Consensus 177 ~~~I~viD~G~k~nivr~L~~~G~~v~vvp~~------~~~~~i~~-~----~~DGIvLSgGPgdp~~~----~~~~~~i 241 (360)
T PRK12564 177 KYKVVAIDFGVKRNILRELAERGCRVTVVPAT------TTAEEILA-L----NPDGVFLSNGPGDPAAL----DYAIEMI 241 (360)
T ss_pred CCEEEEEeCCcHHHHHHHHHHCCCEEEEEeCC------CCHHHHHh-c----CCCEEEEeCCCCChHHH----HHHHHHH
Confidence 357888887642 4566677889999999862 24555532 1 12334554447777431 2333455
Q ss_pred HHHHhcCCeEE
Q 017967 256 DVIQEKNHIPF 266 (363)
Q Consensus 256 ~~~~~~~~~ii 266 (363)
+.+.+.++.++
T Consensus 242 ~~~~~~~~Pil 252 (360)
T PRK12564 242 RELLEKKIPIF 252 (360)
T ss_pred HHHHHcCCeEE
Confidence 55545555543
No 488
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=28.36 E-value=2.7e+02 Score=23.46 Aligned_cols=29 Identities=28% Similarity=0.358 Sum_probs=17.1
Q ss_pred CCCCCHHHHHHHHHcCCC--CcEEEEEcCCCCCC
Q 017967 211 TVGLDFEGMIADIKAAPG--GSFILLHGCAHNPT 242 (363)
Q Consensus 211 ~~~~d~~~l~~~l~~~~~--~~~~~~i~~p~NPT 242 (363)
...-|+..+.+.++...+ ..++++ +|||+
T Consensus 82 ~p~~d~~~~l~~l~~~~d~v~~vllV---gH~P~ 112 (163)
T COG2062 82 LPNGDPGTVLDYLEALGDGVGSVLLV---GHNPL 112 (163)
T ss_pred CCCCCHHHHHHHHHHhcccCceEEEE---CCCcc
Confidence 345577777777765433 233333 78996
No 489
>PRK10595 SOS cell division inhibitor; Provisional
Probab=28.34 E-value=3.6e+02 Score=22.71 Aligned_cols=93 Identities=17% Similarity=0.225 Sum_probs=54.7
Q ss_pred HHHHHHHHhC-CCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC-CCCCCC
Q 017967 166 LAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC-AHNPTG 243 (363)
Q Consensus 166 l~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~-p~NPTG 243 (363)
++.-+++.+. .+.-|+...|-+..+...+...|+....+-.-...+..-.+..+|++++... ..+++ += |+
T Consensus 44 LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~--~~aVL-~Wlp~---- 116 (164)
T PRK10595 44 LLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGN--YSVVL-GWLPD---- 116 (164)
T ss_pred HHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCC--CcEEE-ECCcc----
Confidence 3333344333 5677888889999999999999997544432112122234578888888522 22222 22 22
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEE
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
.++.+++++|--.|++-+.+.|
T Consensus 117 -~l~~~~~RRLQlAAe~g~~l~f 138 (164)
T PRK10595 117 -ELTEEEHARLVDAAQEGNAMGF 138 (164)
T ss_pred -cCCHHHHHHHHHHHHhCCCEEE
Confidence 2457788887666666554433
No 490
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=28.34 E-value=1.2e+02 Score=28.09 Aligned_cols=49 Identities=14% Similarity=0.186 Sum_probs=23.4
Q ss_pred CCCCCHHHHHHHHHcC-CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Q 017967 211 TVGLDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (363)
Q Consensus 211 ~~~~d~~~l~~~l~~~-~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~ 260 (363)
++.+|.+.+++.++.. ..+...++ .+.++==+..+|.+|++++++.+.+
T Consensus 15 dg~iD~~~l~~l~~~l~~~Gv~gi~-v~GstGE~~~Ls~eEr~~l~~~~~~ 64 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSYGAAALF-AAGGTGEFFSLTPDEYAQVVRAAVE 64 (289)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEE-ECcCCcCcccCCHHHHHHHHHHHHH
Confidence 3456666666554431 01222222 2334444555666666666665544
No 491
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=28.30 E-value=1.1e+02 Score=31.14 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=27.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+..=+.++++++++.|+++|+-+|.|-+|..+.
T Consensus 154 ~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 154 NAYGGPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 333458999999999999999999999987653
No 492
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=28.16 E-value=3.2e+02 Score=21.98 Aligned_cols=59 Identities=10% Similarity=-0.002 Sum_probs=36.5
Q ss_pred HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 017967 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (363)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~ 263 (363)
..++..|++++.+.. ...++.+.++..+. ++-++.++.- +-| +...++++++.++++++
T Consensus 21 ~~L~~~GfeVidLG~------~v~~e~~v~aa~~~--~adiVglS~L-~t~----~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 21 HAFTEAGFNVVNLGV------LSPQEEFIDAAIET--DADAILVSSL-YGH----GEIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHHc--CCCEEEEecc-ccC----CHHHHHHHHHHHHHCCC
Confidence 356788889888765 34667777766542 3334444332 222 24677888888887754
No 493
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=28.13 E-value=1.8e+02 Score=26.88 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=28.2
Q ss_pred CCCCCCHHHHHHHHHHHHhc-----CCeEEEecCCCCCc
Q 017967 242 TGIDPTPEQWEKIADVIQEK-----NHIPFFDVAYQGFA 275 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~-----~~~ii~De~y~~~~ 275 (363)
||..-+.++.+.|+++.++. +.++++|-+..+-.
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 68888999999999888752 67899999987764
No 494
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=27.85 E-value=3.9e+02 Score=24.66 Aligned_cols=17 Identities=0% Similarity=-0.365 Sum_probs=13.3
Q ss_pred hHHHHhhCCCCeEEEec
Q 017967 190 HKNIFNDARVPWSEYRY 206 (363)
Q Consensus 190 ~~~~~~~~G~~~~~v~~ 206 (363)
-...++.+|.+++.++-
T Consensus 100 ~~~~~~~~Ga~v~~~~~ 116 (307)
T cd06449 100 NILLSRIMGADVRLVSA 116 (307)
T ss_pred cHHHHHHCCCEEEEECC
Confidence 35567899999998864
No 495
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=27.80 E-value=1.2e+02 Score=23.01 Aligned_cols=84 Identities=21% Similarity=0.223 Sum_probs=45.4
Q ss_pred CCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC
Q 017967 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (363)
..+|++ ..||..|..-+ ..++..|-.|.+.+|.. ...+ ..+++. . .. + ++.+.
T Consensus 7 ~~~vlV--vGgG~va~~k~---~~Ll~~gA~v~vis~~~----~~~~-~~i~~~--~----~~--~-----~~~l~---- 59 (103)
T PF13241_consen 7 GKRVLV--VGGGPVAARKA---RLLLEAGAKVTVISPEI----EFSE-GLIQLI--R----RE--F-----EEDLD---- 59 (103)
T ss_dssp T-EEEE--EEESHHHHHHH---HHHCCCTBEEEEEESSE----HHHH-TSCEEE--E----SS--------GGGCT----
T ss_pred CCEEEE--ECCCHHHHHHH---HHHHhCCCEEEEECCch----hhhh-hHHHHH--h----hh--H-----HHHHh----
Confidence 456766 77777776554 44567888888888886 1112 112221 1 11 1 11122
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
+..+++ ...+| .+.-++|.+.|+++++++-+
T Consensus 60 ~~~lV~-~at~d-------~~~n~~i~~~a~~~~i~vn~ 90 (103)
T PF13241_consen 60 GADLVF-AATDD-------PELNEAIYADARARGILVNV 90 (103)
T ss_dssp TESEEE-E-SS--------HHHHHHHHHHHHHTTSEEEE
T ss_pred hheEEE-ecCCC-------HHHHHHHHHHHhhCCEEEEE
Confidence 233444 34344 45567899999998876653
No 496
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=27.80 E-value=2.5e+02 Score=26.04 Aligned_cols=63 Identities=14% Similarity=0.129 Sum_probs=39.6
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC--CCCcCCCCCC---chhHHHHHHhcCCeEEEEEc
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY--QGFASGSLDN---DASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y--~~~~~~~~~~---~~~~~~~~~~~~~~vi~~~S 301 (363)
.||.-|-|-.|+.+|.+++ .+++|-.+..|.=. +-....+.+. +...++.+++.+.-||+.++
T Consensus 125 ~nPtKpIGpfY~~eea~~l---~~~~gw~~keD~~rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GG 192 (312)
T COG0549 125 LNPTKPIGPFYSEEEAEEL---AKEYGWVFKEDAGRGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGG 192 (312)
T ss_pred cCCCCCCCCCcCHHHHHHH---HhhcCcEEEecCCCCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCC
Confidence 3666677999999999998 66778777777653 2222221111 23455666677666666654
No 497
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=27.72 E-value=68 Score=32.01 Aligned_cols=29 Identities=24% Similarity=0.229 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++.|+++|+.||.|-++-...
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 68999999999999999999999986554
No 498
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=27.49 E-value=98 Score=29.56 Aligned_cols=41 Identities=12% Similarity=-0.005 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEec
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 269 (363)
+..-++...+++|.|.+++.+++.++.+.++++|+.+-+=|
T Consensus 25 Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~vIE 65 (351)
T PF03786_consen 25 GVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSVIE 65 (351)
T ss_dssp TEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEEEE
T ss_pred CCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 55566667789999999999999999999999997655433
No 499
>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C13 (legumain family, clan CD). A type example is legumain from Canavalia ensiformis (Jack bean, Horse bean). The blood fluke parasite Schistosoma mansoni has two cysteine proteases in its digestive tract, one a cathepsin B-like protease, the other termed hemoglobinase [, ]. The latter has been hard to purify, free of cathepsin B, and expressed forms in Escherichia coli prove to be inactive, suggesting that hemoglobinase may act in association with cathepsin B [, ]. Plant vacuolar processing enzyme and legumain from legumes [] have been shown to have sequence and functional similarity to hemoglobinase. The catalytic residues of the family are currently unknown, but sequence alignments reveal one totally conserved cysteine and two totally conserved histidines.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis
Probab=27.47 E-value=4.7e+02 Score=23.71 Aligned_cols=81 Identities=14% Similarity=0.223 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHc------------CCCCcEEEEEcCCCC------CCCCCCCHHHHHHHHHHHHhcCC----eEEEec
Q 017967 212 VGLDFEGMIADIKA------------APGGSFILLHGCAHN------PTGIDPTPEQWEKIADVIQEKNH----IPFFDV 269 (363)
Q Consensus 212 ~~~d~~~l~~~l~~------------~~~~~~~~~i~~p~N------PTG~~~s~~~~~~i~~~~~~~~~----~ii~De 269 (363)
..+.++.|...|+. .+...+++.+..... |.+..++..++.+.++...+.+. ++++|.
T Consensus 78 ~~v~~~~fl~vL~G~~~~~~~kvl~s~~~D~vfiy~~~HG~~~~l~~~~~~~l~~~~L~~~L~~m~~~~~y~~lv~~vea 157 (256)
T PF01650_consen 78 EDVTPENFLNVLTGDKSVPSGKVLNSTENDNVFIYFTGHGGPGFLKFPDGEELTADDLADALDKMHEKKRYKKLVFVVEA 157 (256)
T ss_pred cccCHHHHHHHhcCCCCCCccccccCCCCCeEEEEEeccCCCCcccCCCcccccHHHHHHHHHHHHhhCCcceEEEEEec
Confidence 46778888777662 223344444443333 55667788999998888877655 999999
Q ss_pred CCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 270 AYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 270 ~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
||++..++.. ....+++++.|-.
T Consensus 158 C~SGs~~~~L-----------~~~~nv~~iTAa~ 180 (256)
T PF01650_consen 158 CYSGSFFEGL-----------LKSPNVYVITAAN 180 (256)
T ss_pred ccccchhhcc-----------CCCCCEEEEecCC
Confidence 9998776531 2335677665543
No 500
>COG0313 Predicted methyltransferases [General function prediction only]
Probab=26.65 E-value=4.5e+02 Score=24.20 Aligned_cols=106 Identities=15% Similarity=0.186 Sum_probs=0.0
Q ss_pred EEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Q 017967 181 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (363)
Q Consensus 181 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~ 260 (363)
.|.+|+|. ....+...|++|+.+| |.+.--..=....-+....+|.==-|+.+ .++.+.+.+++.+
T Consensus 90 ~ISDPG~~-LV~~a~~~gi~V~~lP-------G~sA~~tAL~~SGl~~~~F~F~GFLP~k~------~~R~~~l~~l~~~ 155 (275)
T COG0313 90 LISDPGYE-LVRAAREAGIRVVPLP-------GPSALITALSASGLPSQRFLFEGFLPRKS------KERRKRLEALANE 155 (275)
T ss_pred cccCccHH-HHHHHHHcCCcEEecC-------CccHHHHHHHHcCCCCCCeeEeccCCCCc------cHHHHHHHHHHhc
Q ss_pred cCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 261 KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 261 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
....|+....|.-... ...+.......-.+++.+=++|.|
T Consensus 156 ~~t~IfyEsphRl~~t------L~d~~~~~g~~r~v~vaRELTK~~ 195 (275)
T COG0313 156 PRTLIFYESPHRLLAT------LEDIVEVLGSDREVVVARELTKLF 195 (275)
T ss_pred CCeEEEEecchhHHHH------HHHHHHHcCCCceEEEEeecccch
Done!