Query 017967
Match_columns 363
No_of_seqs 252 out of 2377
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:47:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h51_A Aspartate aminotransfer 100.0 2.1E-51 7E-56 398.7 27.5 300 56-359 18-320 (420)
2 3k7y_A Aspartate aminotransfer 100.0 6.4E-50 2.2E-54 387.4 32.3 301 57-359 3-304 (405)
3 3meb_A Aspartate aminotransfer 100.0 5E-46 1.7E-50 365.0 31.2 306 54-359 20-340 (448)
4 7aat_A Aspartate aminotransfer 100.0 5.6E-45 1.9E-49 351.7 29.4 303 56-358 1-304 (401)
5 4f4e_A Aromatic-amino-acid ami 100.0 3.2E-44 1.1E-48 349.0 32.5 300 56-358 22-323 (420)
6 4eu1_A Mitochondrial aspartate 100.0 1.3E-43 4.4E-48 343.3 25.2 299 56-359 14-313 (409)
7 3fsl_A Aromatic-amino-acid ami 100.0 6.8E-42 2.3E-46 329.3 32.1 297 59-358 2-301 (397)
8 1yaa_A Aspartate aminotransfer 100.0 5.4E-41 1.8E-45 325.1 30.5 304 56-359 2-313 (412)
9 2q7w_A Aspartate aminotransfer 100.0 4.5E-40 1.6E-44 316.4 29.4 298 59-359 2-301 (396)
10 1ajs_A Aspartate aminotransfer 100.0 1.3E-39 4.3E-44 315.3 32.4 301 57-359 4-313 (412)
11 2ay1_A Aroat, aromatic amino a 100.0 6.1E-39 2.1E-43 308.5 29.8 295 59-359 2-298 (394)
12 3dyd_A Tyrosine aminotransfera 100.0 1.5E-38 5.2E-43 309.8 22.5 285 59-358 28-316 (427)
13 1b5p_A Protein (aspartate amin 100.0 2.2E-38 7.4E-43 304.4 21.6 270 64-358 10-281 (385)
14 3rq1_A Aminotransferase class 100.0 2E-37 7E-42 300.5 21.1 287 61-359 12-317 (418)
15 3t18_A Aminotransferase class 100.0 2.4E-37 8.3E-42 299.5 21.2 289 60-359 10-316 (413)
16 3b46_A Aminotransferase BNA3; 100.0 1.8E-36 6E-41 297.0 19.8 279 59-359 28-323 (447)
17 3h14_A Aminotransferase, class 100.0 4.1E-35 1.4E-39 281.7 23.8 267 61-357 7-276 (391)
18 3fvs_A Kynurenine--oxoglutarat 100.0 1.3E-35 4.3E-40 287.9 19.5 276 59-358 7-294 (422)
19 3tcm_A Alanine aminotransferas 100.0 1.3E-34 4.6E-39 287.6 27.2 231 118-358 126-367 (500)
20 3ihj_A Alanine aminotransferas 100.0 4.4E-35 1.5E-39 290.9 23.5 287 61-358 34-366 (498)
21 1gd9_A Aspartate aminotransfer 100.0 2.3E-35 8E-40 283.0 20.3 273 65-361 10-283 (389)
22 3aow_A Putative uncharacterize 100.0 3.6E-35 1.2E-39 287.9 21.5 269 65-359 61-336 (448)
23 3e2y_A Kynurenine-oxoglutarate 100.0 2E-35 6.7E-40 285.3 17.8 272 63-358 6-287 (410)
24 3jtx_A Aminotransferase; NP_28 100.0 4.6E-35 1.6E-39 281.5 20.2 269 66-358 10-292 (396)
25 2x5d_A Probable aminotransfera 100.0 2.8E-35 9.5E-40 285.1 18.3 279 62-362 14-296 (412)
26 1j32_A Aspartate aminotransfer 100.0 5.7E-35 1.9E-39 280.2 20.3 273 66-361 11-287 (388)
27 3nra_A Aspartate aminotransfer 100.0 8.2E-35 2.8E-39 280.5 19.1 259 84-362 40-304 (407)
28 1u08_A Hypothetical aminotrans 100.0 4E-34 1.4E-38 274.3 23.6 257 83-362 30-287 (386)
29 2r2n_A Kynurenine/alpha-aminoa 100.0 2.5E-34 8.6E-39 279.8 22.2 271 62-358 11-309 (425)
30 3ele_A Amino transferase; RER0 100.0 4.7E-34 1.6E-38 274.8 23.1 256 83-359 35-303 (398)
31 1o4s_A Aspartate aminotransfer 100.0 1.2E-33 4.2E-38 271.6 25.5 272 64-358 20-293 (389)
32 3ezs_A Aminotransferase ASPB; 100.0 5.9E-34 2E-38 271.9 22.3 266 66-358 5-278 (376)
33 3g0t_A Putative aminotransfera 100.0 1.1E-34 3.9E-39 282.4 17.5 261 82-362 43-329 (437)
34 1bw0_A TAT, protein (tyrosine 100.0 5.9E-34 2E-38 275.8 22.3 278 69-358 18-305 (416)
35 2dou_A Probable N-succinyldiam 100.0 2.1E-34 7.2E-39 275.3 18.3 255 83-361 25-280 (376)
36 2o1b_A Aminotransferase, class 100.0 1.1E-34 3.7E-39 280.5 16.2 271 68-361 32-303 (404)
37 1xi9_A Putative transaminase; 100.0 9.9E-34 3.4E-38 273.6 22.6 274 62-360 19-299 (406)
38 2o0r_A RV0858C (N-succinyldiam 100.0 4.5E-34 1.5E-38 276.5 19.4 257 83-361 25-283 (411)
39 3fdb_A Beta C-S lyase, putativ 100.0 7.1E-34 2.4E-38 271.3 19.6 258 76-362 17-275 (377)
40 1yiz_A Kynurenine aminotransfe 100.0 2.4E-33 8.1E-38 272.8 22.6 254 84-358 38-302 (429)
41 2x5f_A Aspartate_tyrosine_phen 100.0 5.7E-34 2E-38 277.3 18.2 260 83-357 47-324 (430)
42 1iay_A ACC synthase 2, 1-amino 100.0 3E-33 1E-37 272.1 23.1 256 84-359 37-315 (428)
43 3piu_A 1-aminocyclopropane-1-c 100.0 4.4E-33 1.5E-37 271.6 23.0 264 76-359 30-320 (435)
44 1vp4_A Aminotransferase, putat 100.0 3.6E-33 1.2E-37 271.5 21.7 257 82-359 42-307 (425)
45 3kax_A Aminotransferase, class 100.0 2.6E-33 8.9E-38 267.7 19.3 260 80-362 21-283 (383)
46 2zc0_A Alanine glyoxylate tran 100.0 1.4E-32 4.7E-37 265.3 23.7 271 66-359 15-294 (407)
47 2gb3_A Aspartate aminotransfer 100.0 6E-33 2E-37 268.5 20.3 273 61-360 19-293 (409)
48 3qgu_A LL-diaminopimelate amin 100.0 5.1E-33 1.7E-37 272.1 18.8 253 81-358 67-337 (449)
49 1c7n_A Cystalysin; transferase 100.0 5.3E-33 1.8E-37 267.5 18.6 257 83-361 31-290 (399)
50 2z61_A Probable aspartate amin 100.0 1.9E-32 6.7E-37 261.1 22.2 258 66-358 10-269 (370)
51 3dzz_A Putative pyridoxal 5'-p 100.0 9.7E-33 3.3E-37 264.4 19.9 257 84-362 28-287 (391)
52 4dq6_A Putative pyridoxal phos 100.0 1.3E-32 4.4E-37 263.6 18.9 256 83-362 32-291 (391)
53 3ppl_A Aspartate aminotransfer 100.0 3.7E-33 1.3E-37 271.5 14.9 250 83-358 33-306 (427)
54 3ei9_A LL-diaminopimelate amin 100.0 2.4E-32 8.1E-37 266.1 20.0 250 83-357 56-324 (432)
55 1v2d_A Glutamine aminotransfer 100.0 5.2E-32 1.8E-36 259.1 21.0 259 66-359 11-270 (381)
56 1d2f_A MALY protein; aminotran 100.0 4.4E-32 1.5E-36 260.5 19.8 256 83-362 28-287 (390)
57 3ly1_A Putative histidinol-pho 100.0 2.2E-31 7.5E-36 252.0 23.6 244 82-359 15-259 (354)
58 3d6k_A Putative aminotransfera 100.0 3.6E-32 1.2E-36 264.3 18.2 260 70-358 21-304 (422)
59 3get_A Histidinol-phosphate am 100.0 1.6E-31 5.5E-36 254.1 22.0 255 66-358 16-272 (365)
60 3g7q_A Valine-pyruvate aminotr 100.0 1.7E-32 5.9E-37 265.3 15.2 267 67-359 14-297 (417)
61 2zyj_A Alpha-aminodipate amino 100.0 2.3E-31 7.9E-36 256.2 22.7 250 82-359 31-285 (397)
62 2zy4_A L-aspartate beta-decarb 100.0 2.1E-32 7.2E-37 274.2 15.1 222 85-329 106-338 (546)
63 3l8a_A METC, putative aminotra 100.0 1.3E-31 4.5E-36 260.2 18.9 258 83-362 61-321 (421)
64 3asa_A LL-diaminopimelate amin 100.0 2.3E-31 7.9E-36 256.6 20.3 250 81-359 31-292 (400)
65 3op7_A Aminotransferase class 100.0 3.2E-31 1.1E-35 253.0 20.1 216 120-361 57-272 (375)
66 3ez1_A Aminotransferase MOCR f 100.0 7.4E-32 2.5E-36 261.7 15.8 253 83-358 25-299 (423)
67 3euc_A Histidinol-phosphate am 100.0 6.6E-31 2.2E-35 250.1 20.9 241 82-358 29-271 (367)
68 3ffh_A Histidinol-phosphate am 100.0 6.3E-31 2.1E-35 249.9 20.6 240 82-358 31-270 (363)
69 3if2_A Aminotransferase; YP_26 100.0 6.9E-32 2.4E-36 263.6 13.6 273 67-359 14-323 (444)
70 1fg7_A Histidinol phosphate am 100.0 9.4E-31 3.2E-35 248.7 20.4 229 84-358 30-259 (356)
71 1lc5_A COBD, L-threonine-O-3-p 100.0 1.9E-30 6.5E-35 246.9 22.5 254 67-358 9-262 (364)
72 3f6t_A Aspartate aminotransfer 100.0 9.3E-32 3.2E-36 269.1 13.1 245 84-351 104-390 (533)
73 3b1d_A Betac-S lyase; HET: PLP 99.9 2.7E-33 9.3E-38 269.3 0.0 258 83-362 31-291 (392)
74 3ftb_A Histidinol-phosphate am 100.0 2.1E-30 7.1E-35 245.8 19.8 236 83-358 26-261 (361)
75 3p1t_A Putative histidinol-pho 100.0 6.9E-29 2.3E-33 233.1 22.5 230 83-360 16-245 (337)
76 3cq5_A Histidinol-phosphate am 100.0 4E-29 1.4E-33 238.3 21.0 242 85-358 32-276 (369)
77 3bwn_A AT1G70560, L-tryptophan 100.0 4.7E-30 1.6E-34 247.1 13.0 231 82-359 21-266 (391)
78 3fkd_A L-threonine-O-3-phospha 100.0 7E-29 2.4E-33 234.7 20.4 231 83-362 15-246 (350)
79 3hdo_A Histidinol-phosphate am 100.0 6.7E-29 2.3E-33 235.8 18.7 232 83-358 26-259 (360)
80 1uu1_A Histidinol-phosphate am 100.0 3.4E-29 1.2E-33 235.7 15.3 228 84-358 20-247 (335)
81 2hox_A ALLIIN lyase 1; cystein 100.0 3.1E-29 1E-33 244.3 7.7 231 84-360 57-301 (427)
82 1e5e_A MGL, methionine gamma-l 99.9 1.1E-25 3.7E-30 217.6 24.0 228 86-358 21-259 (404)
83 3a2b_A Serine palmitoyltransfe 99.9 5.6E-25 1.9E-29 211.4 19.5 239 84-357 44-288 (398)
84 2rfv_A Methionine gamma-lyase; 99.9 5E-24 1.7E-28 205.3 21.6 232 86-360 23-262 (398)
85 1bs0_A Protein (8-amino-7-oxon 99.9 3.1E-23 1.1E-27 198.2 22.2 235 84-358 40-282 (384)
86 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.2E-23 4.1E-28 199.7 16.8 205 83-322 7-224 (371)
87 1t3i_A Probable cysteine desul 99.9 1.8E-23 6.1E-28 201.7 17.8 212 84-335 28-253 (420)
88 1eg5_A Aminotransferase; PLP-d 99.9 5.9E-24 2E-28 202.5 13.4 226 100-358 11-253 (384)
89 2dr1_A PH1308 protein, 386AA l 99.9 5.6E-23 1.9E-27 196.0 19.4 232 97-359 26-273 (386)
90 3tqx_A 2-amino-3-ketobutyrate 99.9 5.3E-23 1.8E-27 197.2 19.2 236 84-357 44-291 (399)
91 1vjo_A Alanine--glyoxylate ami 99.9 1.6E-23 5.3E-28 200.8 15.4 222 100-358 43-287 (393)
92 1kmj_A Selenocysteine lyase; p 99.9 9.5E-23 3.2E-27 195.6 16.3 211 84-334 23-247 (406)
93 1sff_A 4-aminobutyrate aminotr 99.9 6.9E-23 2.4E-27 198.5 14.6 248 84-357 42-313 (426)
94 1jg8_A L-ALLO-threonine aldola 99.9 1E-22 3.4E-27 191.9 14.6 210 84-328 4-222 (347)
95 2ez2_A Beta-tyrosinase, tyrosi 99.9 2.1E-21 7.3E-26 189.9 24.4 220 84-329 34-278 (456)
96 1ibj_A CBL, cystathionine beta 99.9 6.4E-23 2.2E-27 201.5 13.0 231 84-357 90-326 (464)
97 1elu_A L-cysteine/L-cystine C- 99.9 9.3E-23 3.2E-27 194.7 13.1 205 84-324 16-236 (390)
98 2eh6_A Acoat, acetylornithine 99.9 2.2E-22 7.6E-27 191.5 15.3 238 84-358 29-287 (375)
99 4adb_A Succinylornithine trans 99.9 6.8E-22 2.3E-26 190.1 18.8 237 84-358 40-298 (406)
100 2bwn_A 5-aminolevulinate synth 99.9 1.9E-21 6.5E-26 187.0 21.3 239 84-359 47-295 (401)
101 1fc4_A 2-amino-3-ketobutyrate 99.9 5.5E-22 1.9E-26 190.6 16.8 236 83-358 45-294 (401)
102 2ord_A Acoat, acetylornithine 99.9 9.5E-22 3.3E-26 188.9 17.6 236 84-358 41-297 (397)
103 1svv_A Threonine aldolase; str 99.9 1E-22 3.6E-27 192.1 10.6 216 83-329 13-236 (359)
104 3lvm_A Cysteine desulfurase; s 99.9 1E-21 3.4E-26 190.0 17.0 203 83-321 21-238 (423)
105 2w8t_A SPT, serine palmitoyltr 99.9 2.9E-21 9.8E-26 187.7 19.7 235 84-357 65-309 (427)
106 2z9v_A Aspartate aminotransfer 99.9 7.7E-22 2.6E-26 188.8 14.7 194 98-324 16-212 (392)
107 3qhx_A Cystathionine gamma-syn 99.9 6.3E-21 2.1E-25 183.5 21.0 192 124-357 64-260 (392)
108 1gc0_A Methionine gamma-lyase; 99.9 2.5E-21 8.7E-26 186.4 18.1 227 88-357 26-260 (398)
109 3f9t_A TDC, L-tyrosine decarbo 99.9 2.1E-21 7.1E-26 185.3 16.8 203 102-324 42-263 (397)
110 1cs1_A CGS, protein (cystathio 99.9 1.2E-20 4E-25 180.8 21.9 191 124-356 50-245 (386)
111 3acz_A Methionine gamma-lyase; 99.9 7.5E-21 2.6E-25 182.7 20.4 192 124-357 57-253 (389)
112 2oga_A Transaminase; PLP-depen 99.9 2.1E-21 7.3E-26 186.8 16.5 200 84-327 31-233 (399)
113 3cog_A Cystathionine gamma-lya 99.9 3.9E-21 1.3E-25 185.6 17.9 192 124-358 65-262 (403)
114 3ndn_A O-succinylhomoserine su 99.9 5.3E-21 1.8E-25 185.3 18.8 217 98-356 51-274 (414)
115 2huf_A Alanine glyoxylate amin 99.9 1.5E-21 5.2E-26 186.8 14.8 211 78-335 13-229 (393)
116 3kki_A CAI-1 autoinducer synth 99.9 3.8E-21 1.3E-25 185.5 17.5 205 84-325 60-271 (409)
117 1n8p_A Cystathionine gamma-lya 99.9 3.2E-21 1.1E-25 185.6 16.7 189 124-356 53-250 (393)
118 3cai_A Possible aminotransfera 99.9 5.5E-21 1.9E-25 183.8 18.2 204 84-324 26-242 (406)
119 2ch1_A 3-hydroxykynurenine tra 99.9 7.9E-21 2.7E-25 182.0 19.0 190 100-324 27-221 (396)
120 1iug_A Putative aspartate amin 99.9 2.2E-21 7.5E-26 182.6 14.6 222 99-358 9-245 (352)
121 2aeu_A Hypothetical protein MJ 99.9 4.9E-21 1.7E-25 183.1 17.0 221 84-358 29-253 (374)
122 2po3_A 4-dehydrase; external a 99.9 1.1E-20 3.7E-25 183.4 19.5 200 87-329 20-221 (424)
123 4eb5_A Probable cysteine desul 99.9 1.2E-20 4.2E-25 179.5 19.4 198 95-323 5-214 (382)
124 3zrp_A Serine-pyruvate aminotr 99.9 2.9E-21 9.8E-26 183.8 14.6 199 99-329 10-210 (384)
125 3ruy_A Ornithine aminotransfer 99.9 3E-21 1E-25 185.0 14.6 238 84-358 37-298 (392)
126 1vef_A Acetylornithine/acetyl- 99.9 7.1E-21 2.4E-25 182.5 16.9 245 84-357 46-299 (395)
127 1m32_A 2-aminoethylphosphonate 99.9 1.8E-21 6.1E-26 183.9 12.4 202 84-324 4-209 (366)
128 1ax4_A Tryptophanase; tryptoph 99.9 2.4E-20 8E-25 183.0 20.0 220 84-329 35-288 (467)
129 1b9h_A AHBA synthase, protein 99.9 2E-20 6.7E-25 179.0 18.8 190 100-324 13-204 (388)
130 1pff_A Methionine gamma-lyase; 99.9 8.1E-21 2.8E-25 177.8 15.7 185 130-356 2-193 (331)
131 3a9z_A Selenocysteine lyase; P 99.8 8.9E-21 3E-25 184.0 15.3 202 84-323 18-261 (432)
132 3i4j_A Aminotransferase, class 99.8 1.2E-20 4.1E-25 183.3 16.0 252 84-357 30-311 (430)
133 3dxv_A Alpha-amino-epsilon-cap 99.8 9.1E-21 3.1E-25 184.6 15.1 249 84-357 44-314 (439)
134 3l44_A Glutamate-1-semialdehyd 99.8 2.3E-20 8E-25 181.5 17.6 239 84-357 56-318 (434)
135 2eo5_A 419AA long hypothetical 99.8 2.6E-20 8.8E-25 180.5 16.7 246 84-358 43-326 (419)
136 2pb2_A Acetylornithine/succiny 99.8 3.5E-20 1.2E-24 179.7 17.5 237 84-358 58-316 (420)
137 1s0a_A Adenosylmethionine-8-am 99.8 5.7E-20 1.9E-24 178.5 18.9 247 84-357 44-325 (429)
138 3kgw_A Alanine-glyoxylate amin 99.8 1.3E-20 4.3E-25 179.9 14.1 198 100-335 32-233 (393)
139 3isl_A Purine catabolism prote 99.8 2E-20 6.9E-25 180.2 15.3 192 100-326 20-216 (416)
140 3uwc_A Nucleotide-sugar aminot 99.8 3.3E-20 1.1E-24 176.4 16.5 195 84-324 7-204 (374)
141 1zod_A DGD, 2,2-dialkylglycine 99.8 2.5E-20 8.6E-25 181.1 16.0 247 84-357 44-319 (433)
142 3vax_A Putative uncharacterize 99.8 1.6E-21 5.5E-26 187.0 7.4 186 100-316 30-230 (400)
143 1v72_A Aldolase; PLP-dependent 99.8 3.4E-20 1.1E-24 174.8 16.0 214 82-329 6-232 (356)
144 3nnk_A Ureidoglycine-glyoxylat 99.8 1.5E-20 5.2E-25 180.7 13.9 197 100-335 22-223 (411)
145 4hvk_A Probable cysteine desul 99.8 7.9E-20 2.7E-24 173.4 18.3 188 98-316 8-209 (382)
146 1mdo_A ARNB aminotransferase; 99.8 1.3E-19 4.4E-24 173.4 18.6 189 103-329 19-209 (393)
147 2yrr_A Aminotransferase, class 99.8 2.2E-20 7.6E-25 175.5 12.8 192 100-326 9-204 (353)
148 3dr4_A Putative perosamine syn 99.8 1.3E-19 4.4E-24 173.7 17.7 199 83-327 22-225 (391)
149 1qgn_A Protein (cystathionine 99.8 9.4E-19 3.2E-23 170.8 23.9 225 88-356 75-307 (445)
150 3fq8_A Glutamate-1-semialdehyd 99.8 2.2E-19 7.5E-24 174.2 19.3 239 84-357 53-315 (427)
151 4a6r_A Omega transaminase; tra 99.8 9.5E-20 3.3E-24 178.7 16.4 251 84-357 51-337 (459)
152 3nx3_A Acoat, acetylornithine 99.8 1.3E-19 4.4E-24 173.9 16.8 236 84-357 37-294 (395)
153 1o69_A Aminotransferase; struc 99.8 2.7E-19 9.1E-24 171.9 18.9 192 100-327 8-203 (394)
154 3k28_A Glutamate-1-semialdehyd 99.8 2.1E-19 7.3E-24 174.5 18.4 247 84-358 54-317 (429)
155 3nyt_A Aminotransferase WBPE; 99.8 1.4E-19 4.9E-24 172.0 16.4 186 102-325 14-203 (367)
156 2cb1_A O-acetyl homoserine sul 99.8 7.5E-19 2.6E-23 169.9 21.7 165 120-322 48-218 (412)
157 3f0h_A Aminotransferase; RER07 99.8 1.7E-19 5.7E-24 171.5 16.8 190 100-324 28-222 (376)
158 3mad_A Sphingosine-1-phosphate 99.8 2.7E-19 9.3E-24 177.9 18.6 205 102-324 112-329 (514)
159 2bkw_A Alanine-glyoxylate amin 99.8 1.9E-19 6.4E-24 171.4 16.7 197 100-327 14-220 (385)
160 2c81_A Glutamine-2-deoxy-scyll 99.8 4.2E-19 1.4E-23 171.7 19.3 194 100-329 12-213 (418)
161 3n5m_A Adenosylmethionine-8-am 99.8 2E-19 6.8E-24 175.9 16.8 247 84-357 50-336 (452)
162 4ffc_A 4-aminobutyrate aminotr 99.8 7.3E-20 2.5E-24 179.3 13.7 249 84-357 65-339 (453)
163 2dkj_A Serine hydroxymethyltra 99.8 6.7E-20 2.3E-24 176.1 12.8 213 84-337 24-251 (407)
164 2cy8_A D-phgat, D-phenylglycin 99.8 2.6E-19 8.9E-24 175.1 16.4 239 84-358 58-320 (453)
165 3jzl_A Putative cystathionine 99.8 7E-19 2.4E-23 169.9 18.9 181 120-331 54-252 (409)
166 3nmy_A Xometc, cystathionine g 99.8 7.6E-19 2.6E-23 169.4 19.0 193 124-357 65-262 (400)
167 2epj_A Glutamate-1-semialdehyd 99.8 1.4E-18 4.7E-23 169.0 20.1 239 84-357 57-319 (434)
168 3a8u_X Omega-amino acid--pyruv 99.8 2.2E-18 7.5E-23 168.3 21.4 249 84-357 51-343 (449)
169 3gju_A Putative aminotransfera 99.8 1E-18 3.5E-23 171.4 19.1 252 84-357 52-343 (460)
170 3lws_A Aromatic amino acid bet 99.8 1.9E-19 6.3E-24 170.2 12.9 178 120-329 41-226 (357)
171 3ht4_A Aluminum resistance pro 99.8 5.3E-19 1.8E-23 172.0 16.2 179 125-330 64-257 (431)
172 3ffr_A Phosphoserine aminotran 99.8 5.8E-19 2E-23 166.5 16.0 192 100-329 13-212 (362)
173 2fq6_A Cystathionine beta-lyas 99.8 2E-18 6.8E-23 167.2 19.4 168 124-330 80-254 (415)
174 4e77_A Glutamate-1-semialdehyd 99.8 1.6E-18 5.4E-23 168.3 17.9 238 84-357 54-316 (429)
175 2e7u_A Glutamate-1-semialdehyd 99.8 2.6E-18 8.8E-23 166.6 19.0 237 84-357 53-314 (424)
176 3frk_A QDTB; aminotransferase, 99.8 1.2E-18 4.2E-23 165.8 16.1 188 101-325 14-204 (373)
177 3oks_A 4-aminobutyrate transam 99.8 3.3E-19 1.1E-23 174.6 12.3 252 84-357 62-341 (451)
178 3i16_A Aluminum resistance pro 99.8 1.1E-17 3.8E-22 162.1 22.4 182 120-330 68-268 (427)
179 1z7d_A Ornithine aminotransfer 99.8 1.8E-18 6E-23 168.5 16.5 237 84-357 66-327 (433)
180 3dod_A Adenosylmethionine-8-am 99.8 9.3E-19 3.2E-23 171.1 14.5 249 84-357 45-333 (448)
181 2oat_A Ornithine aminotransfer 99.8 6.9E-18 2.4E-22 164.6 20.5 237 84-357 77-338 (439)
182 3tfu_A Adenosylmethionine-8-am 99.8 2E-18 6.7E-23 169.3 16.3 249 84-357 76-354 (457)
183 3n0l_A Serine hydroxymethyltra 99.8 2.4E-18 8.1E-23 165.8 16.5 210 84-336 26-251 (417)
184 3mc6_A Sphingosine-1-phosphate 99.8 1.4E-18 4.7E-23 172.0 15.1 190 120-324 97-297 (497)
185 3pj0_A LMO0305 protein; struct 99.8 3.3E-19 1.1E-23 168.5 9.9 196 102-329 27-228 (359)
186 2fnu_A Aminotransferase; prote 99.8 5.4E-18 1.9E-22 160.8 18.3 186 100-325 9-200 (375)
187 3i5t_A Aminotransferase; pyrid 99.8 5.6E-18 1.9E-22 166.9 18.7 251 84-357 55-344 (476)
188 3ri6_A O-acetylhomoserine sulf 99.8 6.7E-18 2.3E-22 164.1 18.9 159 123-317 79-241 (430)
189 3hvy_A Cystathionine beta-lyas 99.8 1.6E-17 5.6E-22 161.0 20.5 181 120-330 69-268 (427)
190 1qz9_A Kynureninase; kynurenin 99.8 4.1E-18 1.4E-22 164.2 16.2 197 84-324 28-244 (416)
191 2oqx_A Tryptophanase; lyase, p 99.8 9.5E-18 3.2E-22 164.4 18.4 214 84-323 33-281 (467)
192 1wyu_B Glycine dehydrogenase s 99.8 5.8E-18 2E-22 166.7 16.8 174 125-322 102-286 (474)
193 2ctz_A O-acetyl-L-homoserine s 99.8 1.1E-17 3.8E-22 162.3 18.0 184 99-317 29-219 (421)
194 3hmu_A Aminotransferase, class 99.8 1E-17 3.6E-22 164.8 16.0 252 84-357 56-340 (472)
195 3ju7_A Putative PLP-dependent 99.8 1.5E-17 5E-22 159.1 16.3 191 103-326 15-209 (377)
196 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.9E-17 6.4E-22 161.2 17.2 185 103-324 42-236 (437)
197 2dgk_A GAD-beta, GADB, glutama 99.7 4.6E-17 1.6E-21 159.2 18.6 203 102-324 54-279 (452)
198 2c0r_A PSAT, phosphoserine ami 99.7 1.3E-18 4.3E-23 164.9 7.0 216 100-358 13-254 (362)
199 1w23_A Phosphoserine aminotran 99.7 2.7E-19 9.3E-24 169.0 2.1 193 85-324 4-211 (360)
200 3e9k_A Kynureninase; kynurenin 99.7 4.2E-17 1.4E-21 160.0 16.1 169 128-324 113-293 (465)
201 2cjg_A L-lysine-epsilon aminot 99.7 1.7E-17 5.7E-22 162.3 12.7 245 84-357 55-346 (449)
202 3ecd_A Serine hydroxymethyltra 99.7 7.7E-17 2.6E-21 155.4 16.5 146 157-324 100-251 (425)
203 2z67_A O-phosphoseryl-tRNA(SEC 99.7 1.3E-16 4.5E-21 156.3 15.0 181 128-324 131-315 (456)
204 3b8x_A WBDK, pyridoxamine 5-ph 99.7 3.6E-16 1.2E-20 149.6 16.8 150 100-274 11-167 (390)
205 1rv3_A Serine hydroxymethyltra 99.7 1.5E-16 5.1E-21 157.0 13.3 208 84-323 45-271 (483)
206 2qma_A Diaminobutyrate-pyruvat 99.7 5E-16 1.7E-20 153.8 16.9 238 70-324 80-342 (497)
207 3h7f_A Serine hydroxymethyltra 99.7 1.5E-16 5.3E-21 155.3 12.8 203 84-325 46-264 (447)
208 3vp6_A Glutamate decarboxylase 99.7 9.9E-16 3.4E-20 152.2 18.6 207 103-324 109-333 (511)
209 1js3_A DDC;, DOPA decarboxylas 99.7 4.5E-16 1.5E-20 153.6 15.2 208 102-324 86-320 (486)
210 2okj_A Glutamate decarboxylase 99.7 1.3E-15 4.5E-20 151.0 18.6 202 108-324 111-330 (504)
211 3gbx_A Serine hydroxymethyltra 99.7 5.4E-16 1.8E-20 149.3 15.1 189 102-322 42-246 (420)
212 2x3l_A ORN/Lys/Arg decarboxyla 99.7 1.9E-16 6.6E-21 154.7 9.6 170 122-323 53-227 (446)
213 2yky_A Beta-transaminase; tran 99.4 1.4E-17 4.7E-22 163.1 0.0 243 78-357 96-350 (465)
214 3hbx_A GAD 1, glutamate decarb 99.6 1.2E-14 4E-19 144.2 20.4 205 100-324 66-294 (502)
215 2jis_A Cysteine sulfinic acid 99.6 1.2E-14 4.2E-19 144.4 18.4 188 120-323 138-343 (515)
216 2vyc_A Biodegradative arginine 99.6 3.7E-15 1.2E-19 154.2 14.7 171 127-316 206-396 (755)
217 3ke3_A Putative serine-pyruvat 99.6 1.1E-14 3.6E-19 139.1 16.7 170 129-327 38-218 (379)
218 2vi8_A Serine hydroxymethyltra 99.6 3.8E-15 1.3E-19 142.7 12.1 197 103-336 36-249 (405)
219 2fyf_A PSAT, phosphoserine ami 99.6 3.7E-15 1.3E-19 143.0 10.4 199 83-329 39-243 (398)
220 1c4k_A Protein (ornithine deca 99.6 6.7E-15 2.3E-19 151.2 11.6 175 124-316 171-365 (730)
221 2a7v_A Serine hydroxymethyltra 99.6 2.3E-14 7.8E-19 141.1 13.4 204 84-322 55-280 (490)
222 4e1o_A HDC, histidine decarbox 99.5 1.3E-13 4.4E-18 135.9 14.4 206 103-324 92-326 (481)
223 3n75_A LDC, lysine decarboxyla 99.5 8.2E-14 2.8E-18 142.2 11.8 169 124-316 193-378 (715)
224 1wyu_A Glycine dehydrogenase ( 99.5 1.9E-13 6.4E-18 133.0 13.8 160 128-324 110-277 (438)
225 1ohv_A 4-aminobutyrate aminotr 99.5 7.9E-14 2.7E-18 137.1 10.2 249 84-357 64-369 (472)
226 3k40_A Aromatic-L-amino-acid d 99.4 1.1E-12 3.9E-17 128.9 15.8 206 103-325 87-320 (475)
227 3hl2_A O-phosphoseryl-tRNA(SEC 99.1 1.8E-09 6.1E-14 103.6 14.3 172 137-324 124-301 (501)
228 3bc8_A O-phosphoseryl-tRNA(SEC 99.0 2.7E-09 9.3E-14 103.1 12.5 183 129-326 97-285 (450)
229 4ao9_A Beta-phenylalanine amin 99.0 5.7E-09 2E-13 101.5 14.8 214 78-324 83-303 (454)
230 3qm2_A Phosphoserine aminotran 98.9 1.3E-09 4.5E-14 104.1 5.4 188 95-316 31-232 (386)
231 3m5u_A Phosphoserine aminotran 98.8 1.7E-08 5.9E-13 95.4 10.4 195 84-326 5-211 (361)
232 3e77_A Phosphoserine aminotran 98.7 9.4E-09 3.2E-13 97.7 6.2 185 97-316 19-217 (377)
233 4atq_A 4-aminobutyrate transam 98.5 1.6E-06 5.5E-11 84.4 14.7 255 78-357 60-340 (456)
234 4a0g_A Adenosylmethionine-8-am 98.4 6.8E-06 2.3E-10 85.7 18.7 125 217-357 577-716 (831)
235 4e3q_A Pyruvate transaminase; 98.2 0.00011 3.6E-09 71.8 19.4 253 84-357 68-358 (473)
236 3ou5_A Serine hydroxymethyltra 98.1 2.6E-05 8.8E-10 74.7 11.4 209 84-322 55-280 (490)
237 3gh5_A HEX1, beta-hexosaminida 66.9 55 0.0019 31.8 11.8 68 193-267 207-274 (525)
238 1ofu_X SULA, hypothetical prot 65.2 43 0.0015 25.4 10.0 98 158-266 11-114 (119)
239 4fgs_A Probable dehydrogenase 64.2 24 0.00082 31.1 8.1 95 157-257 34-133 (273)
240 3guy_A Short-chain dehydrogena 56.5 85 0.0029 26.0 10.2 93 158-256 7-101 (230)
241 1jak_A Beta-N-acetylhexosamini 55.5 28 0.00097 33.7 7.5 66 195-267 184-249 (512)
242 2ojp_A DHDPS, dihydrodipicolin 53.9 92 0.0032 27.4 10.3 14 242-255 139-152 (292)
243 2gjx_A Beta-hexosaminidase alp 53.1 18 0.00061 35.1 5.7 62 195-267 172-233 (507)
244 2vc6_A MOSA, dihydrodipicolina 51.3 74 0.0025 28.1 9.2 26 242-270 138-164 (292)
245 3qze_A DHDPS, dihydrodipicolin 50.6 1.4E+02 0.0047 26.7 11.3 25 242-269 161-185 (314)
246 2yl5_A Beta-N-acetylhexosamini 48.9 14 0.00048 35.1 4.1 28 239-266 85-112 (442)
247 1now_A Beta-hexosaminidase bet 48.1 27 0.00092 33.8 6.0 60 195-266 178-237 (507)
248 1bqc_A Protein (beta-mannanase 47.6 53 0.0018 28.9 7.6 19 189-207 36-54 (302)
249 4g81_D Putative hexonate dehyd 46.7 1.4E+02 0.0048 25.7 10.4 93 158-256 15-115 (255)
250 2r8w_A AGR_C_1641P; APC7498, d 45.6 78 0.0027 28.6 8.5 26 242-270 172-197 (332)
251 3rwb_A TPLDH, pyridoxal 4-dehy 44.8 80 0.0027 26.7 8.2 93 158-256 12-109 (247)
252 2yl6_A Beta-N-acetylhexosamini 44.7 14 0.00048 35.0 3.4 28 239-266 82-109 (434)
253 3rd5_A Mypaa.01249.C; ssgcid, 44.1 91 0.0031 27.0 8.6 90 158-254 22-111 (291)
254 2wkj_A N-acetylneuraminate lya 43.2 1.8E+02 0.006 25.8 12.2 27 241-270 149-175 (303)
255 1c7s_A Beta-N-acetylhexosamini 42.5 93 0.0032 32.2 9.2 117 145-266 264-417 (858)
256 1oft_A SULA, hypothetical prot 41.0 1.4E+02 0.0047 24.0 11.6 95 160-265 55-155 (161)
257 1f6k_A N-acetylneuraminate lya 40.7 1.9E+02 0.0064 25.4 11.9 26 242-270 142-167 (293)
258 3a5f_A Dihydrodipicolinate syn 40.2 97 0.0033 27.3 8.1 13 176-188 95-108 (291)
259 1xky_A Dihydrodipicolinate syn 39.7 2E+02 0.0068 25.4 13.5 26 242-270 150-175 (301)
260 3ozo_A N-acetylglucosaminidase 38.6 47 0.0016 32.7 6.1 60 195-266 214-273 (572)
261 3h5d_A DHDPS, dihydrodipicolin 38.5 2.1E+02 0.0072 25.4 11.5 26 242-270 146-171 (311)
262 3tpc_A Short chain alcohol deh 37.1 1.2E+02 0.0041 25.6 8.1 93 158-256 13-114 (257)
263 4gqr_A Pancreatic alpha-amylas 37.1 26 0.00088 33.1 4.0 28 247-274 75-102 (496)
264 3s5o_A 4-hydroxy-2-oxoglutarat 37.1 2.2E+02 0.0075 25.2 13.2 11 178-188 111-121 (307)
265 3gvc_A Oxidoreductase, probabl 36.8 1.2E+02 0.0041 26.2 8.1 93 158-256 35-132 (277)
266 1fob_A Beta-1,4-galactanase; B 36.7 45 0.0015 30.2 5.4 37 239-275 50-86 (334)
267 1hjs_A Beta-1,4-galactanase; 4 36.5 44 0.0015 30.2 5.3 38 238-275 49-86 (332)
268 3flu_A DHDPS, dihydrodipicolin 36.5 2.2E+02 0.0076 25.0 11.0 11 178-188 104-114 (297)
269 4dqx_A Probable oxidoreductase 35.4 1.6E+02 0.0055 25.3 8.7 93 158-256 33-130 (277)
270 2nuw_A 2-keto-3-deoxygluconate 35.4 2.1E+02 0.0072 25.0 9.5 50 129-189 51-104 (288)
271 3grp_A 3-oxoacyl-(acyl carrier 34.9 1.3E+02 0.0044 25.8 7.9 98 150-256 28-130 (266)
272 2rfg_A Dihydrodipicolinate syn 34.5 2.4E+02 0.0081 24.8 10.9 37 229-270 127-163 (297)
273 4eso_A Putative oxidoreductase 34.2 1.3E+02 0.0046 25.4 7.9 99 150-257 9-112 (255)
274 4fn4_A Short chain dehydrogena 34.2 1.7E+02 0.0058 25.1 8.5 93 158-257 13-115 (254)
275 1i4n_A Indole-3-glycerol phosp 33.5 49 0.0017 28.8 4.8 24 246-269 134-157 (251)
276 3ic5_A Putative saccharopine d 33.0 1.3E+02 0.0045 21.3 6.9 71 175-266 26-97 (118)
277 3ppi_A 3-hydroxyacyl-COA dehyd 32.4 2.3E+02 0.008 24.0 9.6 94 157-256 35-138 (281)
278 2yxb_A Coenzyme B12-dependent 32.1 1.5E+02 0.0051 23.4 7.3 57 193-262 41-97 (161)
279 4iin_A 3-ketoacyl-acyl carrier 31.9 1.5E+02 0.005 25.3 7.9 102 146-256 26-136 (271)
280 3zq4_A Ribonuclease J 1, RNAse 31.9 1E+02 0.0036 29.9 7.5 78 176-263 323-408 (555)
281 2ya0_A Putative alkaline amylo 30.9 30 0.001 35.0 3.4 28 247-274 253-280 (714)
282 1xp8_A RECA protein, recombina 30.3 1.6E+02 0.0056 26.8 8.1 135 125-270 56-210 (366)
283 3tzq_B Short-chain type dehydr 30.3 2.5E+02 0.0086 23.8 9.1 93 158-256 17-116 (271)
284 3m1a_A Putative dehydrogenase; 30.2 1.9E+02 0.0066 24.5 8.4 92 158-255 11-107 (281)
285 4e6p_A Probable sorbitol dehyd 30.2 2.4E+02 0.0082 23.7 8.9 93 158-256 14-111 (259)
286 2cc0_A Acetyl-xylan esterase; 30.0 68 0.0023 26.2 5.0 69 191-265 111-179 (195)
287 3bzy_B ESCU; auto cleavage pro 29.9 31 0.0011 24.4 2.4 22 249-270 27-48 (83)
288 2gm5_A Transposon gamma-delta 29.2 1.4E+02 0.0048 22.8 6.5 47 217-267 45-91 (139)
289 3rcn_A Beta-N-acetylhexosamini 28.8 33 0.0011 33.5 3.2 73 194-266 164-241 (543)
290 2yv1_A Succinyl-COA ligase [AD 28.6 3E+02 0.01 24.1 9.4 47 215-271 83-130 (294)
291 1g94_A Alpha-amylase; beta-alp 28.5 40 0.0014 31.8 3.7 30 247-276 63-92 (448)
292 1vhx_A Putative holliday junct 28.4 2.1E+02 0.0072 22.3 7.5 61 212-274 40-103 (150)
293 3pxx_A Carveol dehydrogenase; 28.4 1.5E+02 0.005 25.4 7.3 59 194-257 66-127 (287)
294 3bk2_A RNAse J, metal dependen 28.3 1.9E+02 0.0066 28.0 8.7 79 175-263 337-423 (562)
295 3kux_A Putative oxidoreductase 27.9 2E+02 0.0069 25.7 8.3 10 178-187 69-78 (352)
296 3h7a_A Short chain dehydrogena 27.9 2.7E+02 0.0092 23.3 9.8 92 158-256 13-112 (252)
297 4a29_A Engineered retro-aldol 27.7 85 0.0029 27.3 5.3 79 179-268 81-159 (258)
298 3n74_A 3-ketoacyl-(acyl-carrie 27.5 2.6E+02 0.0088 23.4 8.6 66 150-224 10-75 (261)
299 1yht_A DSPB; beta barrel, hydr 27.2 36 0.0012 31.4 3.0 69 193-266 41-112 (367)
300 1lwj_A 4-alpha-glucanotransfer 26.8 57 0.002 30.5 4.5 31 247-277 68-98 (441)
301 3ged_A Short-chain dehydrogena 26.3 2.8E+02 0.0095 23.6 8.5 97 151-257 4-105 (247)
302 2nu8_A Succinyl-COA ligase [AD 26.2 80 0.0027 27.8 5.0 71 187-270 53-123 (288)
303 4aie_A Glucan 1,6-alpha-glucos 25.9 51 0.0017 31.7 4.0 29 247-275 78-106 (549)
304 3l6e_A Oxidoreductase, short-c 25.9 1.8E+02 0.006 24.2 7.1 93 158-256 9-106 (235)
305 1ht6_A AMY1, alpha-amylase iso 25.6 62 0.0021 29.9 4.4 29 247-275 67-95 (405)
306 4dyv_A Short-chain dehydrogena 25.6 2.4E+02 0.008 24.1 8.0 94 157-256 33-132 (272)
307 3gem_A Short chain dehydrogena 25.6 3E+02 0.01 23.2 9.8 96 150-256 28-127 (260)
308 1ud2_A Amylase, alpha-amylase; 25.5 53 0.0018 31.2 4.0 29 247-275 79-107 (480)
309 3bh4_A Alpha-amylase; calcium, 25.1 55 0.0019 31.1 4.0 29 247-275 77-105 (483)
310 2vt1_B Surface presentation of 25.0 43 0.0015 24.3 2.4 22 249-270 27-48 (93)
311 1wpc_A Glucan 1,4-alpha-maltoh 24.9 55 0.0019 31.1 4.0 29 247-275 81-109 (485)
312 3zu3_A Putative reductase YPO4 24.6 4.2E+02 0.015 24.5 11.9 27 193-224 103-129 (405)
313 3db2_A Putative NADPH-dependen 24.6 2.4E+02 0.0082 25.1 8.2 72 186-270 54-125 (354)
314 2ya1_A Putative alkaline amylo 24.6 49 0.0017 35.0 3.8 28 248-275 561-588 (1014)
315 1hvx_A Alpha-amylase; hydrolas 24.4 57 0.002 31.4 4.0 29 247-275 80-108 (515)
316 2z1k_A (NEO)pullulanase; hydro 24.2 68 0.0023 30.3 4.4 30 247-276 95-124 (475)
317 4ibo_A Gluconate dehydrogenase 24.2 3.3E+02 0.011 23.1 9.1 93 158-256 32-132 (271)
318 2ffh_A Protein (FFH); SRP54, s 24.1 4.3E+02 0.015 24.6 9.9 133 131-270 78-221 (425)
319 2guy_A Alpha-amylase A; (beta- 24.0 59 0.002 30.8 4.0 29 247-275 96-124 (478)
320 4es6_A Uroporphyrinogen-III sy 23.9 2.1E+02 0.0073 24.1 7.4 74 175-260 131-206 (254)
321 3q9l_A Septum site-determining 23.8 1.8E+02 0.006 24.3 6.8 110 154-270 7-122 (260)
322 1jae_A Alpha-amylase; glycosid 23.6 52 0.0018 31.2 3.5 30 247-276 73-102 (471)
323 3oqb_A Oxidoreductase; structu 23.5 3.2E+02 0.011 24.5 8.9 41 178-223 85-127 (383)
324 1mxg_A Alpha amylase; hyperthe 23.4 73 0.0025 29.8 4.5 29 247-275 85-113 (435)
325 3t7y_A YOP proteins translocat 23.4 42 0.0014 24.5 2.1 22 249-270 42-63 (97)
326 1wza_A Alpha-amylase A; hydrol 23.4 72 0.0025 30.3 4.5 30 247-276 80-109 (488)
327 3ohs_X Trans-1,2-dihydrobenzen 23.4 2E+02 0.0069 25.4 7.4 10 178-187 68-77 (334)
328 3op4_A 3-oxoacyl-[acyl-carrier 23.4 2.6E+02 0.009 23.3 7.8 98 150-256 10-112 (248)
329 3e9m_A Oxidoreductase, GFO/IDH 23.3 2.5E+02 0.0087 24.7 8.0 21 247-267 103-123 (330)
330 1gcy_A Glucan 1,4-alpha-maltot 23.3 71 0.0024 30.8 4.4 30 247-276 91-120 (527)
331 2glx_A 1,5-anhydro-D-fructose 22.9 2.6E+02 0.0089 24.5 8.0 68 187-267 51-118 (332)
332 3e18_A Oxidoreductase; dehydro 22.8 2.2E+02 0.0076 25.5 7.6 20 248-267 102-121 (359)
333 3gaf_A 7-alpha-hydroxysteroid 22.8 3.2E+02 0.011 22.9 8.3 93 158-256 18-117 (256)
334 1y80_A Predicted cobalamin bin 22.7 1.6E+02 0.0053 24.3 6.0 62 193-267 111-176 (210)
335 3c01_E Surface presentation of 22.7 44 0.0015 24.5 2.1 22 249-270 27-48 (98)
336 3i23_A Oxidoreductase, GFO/IDH 22.5 2.3E+02 0.008 25.2 7.6 11 178-188 67-77 (349)
337 1pjq_A CYSG, siroheme synthase 22.4 2.1E+02 0.007 27.0 7.4 93 149-270 12-106 (457)
338 2aaa_A Alpha-amylase; glycosid 22.4 63 0.0021 30.7 3.8 30 247-276 96-125 (484)
339 2p2s_A Putative oxidoreductase 22.3 3.2E+02 0.011 24.0 8.5 19 248-266 103-121 (336)
340 2fp4_A Succinyl-COA ligase [GD 22.1 4E+02 0.014 23.4 9.4 110 147-272 11-133 (305)
341 3dhu_A Alpha-amylase; structur 22.1 68 0.0023 30.0 4.0 28 247-274 82-109 (449)
342 3moi_A Probable dehydrogenase; 22.1 2.5E+02 0.0084 25.5 7.8 11 178-188 66-76 (387)
343 1iv0_A Hypothetical protein; r 22.0 75 0.0026 23.1 3.3 59 212-272 36-96 (98)
344 1ua7_A Alpha-amylase; beta-alp 22.0 66 0.0023 29.9 3.8 31 247-277 73-103 (422)
345 4ew6_A D-galactose-1-dehydroge 21.7 1.5E+02 0.005 26.5 6.0 72 186-270 68-140 (330)
346 2dh2_A 4F2 cell-surface antige 21.5 85 0.0029 29.3 4.5 29 247-275 80-108 (424)
347 3evn_A Oxidoreductase, GFO/IDH 21.4 2.9E+02 0.0098 24.3 7.9 19 248-266 104-122 (329)
348 1ccw_A Protein (glutamate muta 21.3 1.5E+02 0.0052 22.6 5.3 58 192-262 25-82 (137)
349 4dmm_A 3-oxoacyl-[acyl-carrier 21.2 2.8E+02 0.0097 23.5 7.7 98 150-256 29-135 (269)
350 3l23_A Sugar phosphate isomera 21.1 3.3E+02 0.011 23.5 8.2 79 187-267 31-126 (303)
351 3vc3_A Beta-cyanoalnine syntha 20.8 1E+02 0.0036 27.8 4.8 53 151-206 89-141 (344)
352 4fb5_A Probable oxidoreductase 20.8 2.9E+02 0.0098 24.7 8.0 42 178-224 96-139 (393)
353 3is3_A 17BETA-hydroxysteroid d 20.7 2.5E+02 0.0086 23.7 7.2 93 158-256 24-125 (270)
354 2whl_A Beta-mannanase, baman5; 20.5 71 0.0024 27.9 3.6 24 247-270 62-85 (294)
355 2qlc_A DNA repair protein RADC 20.5 72 0.0024 24.4 3.1 55 217-275 58-121 (126)
356 1j0h_A Neopullulanase; beta-al 20.5 86 0.0029 30.7 4.4 30 247-276 221-250 (588)
357 1jr2_A Uroporphyrinogen-III sy 20.5 3.2E+02 0.011 23.5 7.9 75 175-260 155-231 (286)
358 3v5n_A Oxidoreductase; structu 20.5 2.9E+02 0.0097 25.4 7.9 12 178-189 112-123 (417)
359 3cpr_A Dihydrodipicolinate syn 20.3 1.3E+02 0.0043 26.7 5.2 61 205-267 27-90 (304)
360 1ea9_C Cyclomaltodextrinase; h 20.3 1.1E+02 0.0039 29.8 5.3 32 245-276 215-246 (583)
361 2wc7_A Alpha amylase, catalyti 20.3 71 0.0024 30.3 3.7 28 248-275 102-129 (488)
362 1pii_A N-(5'phosphoribosyl)ant 20.2 1.1E+02 0.0039 28.9 5.0 52 210-270 114-165 (452)
363 2fcj_A Small toprim domain pro 20.2 41 0.0014 25.6 1.6 30 243-273 34-63 (119)
364 3qp9_A Type I polyketide synth 20.1 5.7E+02 0.019 24.3 11.2 102 147-256 248-371 (525)
365 3uve_A Carveol dehydrogenase ( 20.1 2.8E+02 0.0095 23.7 7.4 57 195-256 72-134 (286)
366 1u94_A RECA protein, recombina 20.1 1.4E+02 0.0049 27.1 5.6 70 125-201 45-115 (356)
367 3tfo_A Putative 3-oxoacyl-(acy 20.0 3.8E+02 0.013 22.7 8.2 94 157-256 9-110 (264)
368 3b4u_A Dihydrodipicolinate syn 20.0 4.4E+02 0.015 23.0 12.7 14 176-189 97-111 (294)
No 1
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.1e-51 Score=398.67 Aligned_cols=300 Identities=44% Similarity=0.745 Sum_probs=266.4
Q ss_pred ccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHH
Q 017967 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (363)
Q Consensus 56 ~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 135 (363)
+++|++|+..|+|+|+++.+.++.++++ +|||++|.|+|++|.+++++.|+++...+.+....++|.|..|.++||+++
T Consensus 18 ~~~~~~v~~~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~ai 96 (420)
T 4h51_A 18 AERWQKIQAQAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEA 96 (420)
T ss_dssp HHHHHTCCCCCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred hHHHhCCCCCCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHH
Confidence 4578999999999999999999999886 999999999999999999999999998888776667899999999999999
Q ss_pred HHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--CCCCEEEEcCCCCcchHHHHhhCCCC-eEEEecccCCCC
Q 017967 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPGAKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTV 212 (363)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--~~gd~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~~~~~~ 212 (363)
++++++.. ...+++..++|.|||+|+.+++.++... .|||+|++++|+|++|..+++..|.+ +..+++++++++
T Consensus 97 a~~~~g~~---~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~ 173 (420)
T 4h51_A 97 VKIIYGNT---VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV 173 (420)
T ss_dssp HHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred HHHhcCCC---ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence 99987754 2356788888999999999886655432 49999999999999999999999997 556777777788
Q ss_pred CCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc
Q 017967 213 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (363)
Q Consensus 213 ~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (363)
++|++.+.+.+...+++++++++++||||||.+++.++|++|+++|+++++++|+||+|++|.+++.+.+....+.+.+.
T Consensus 174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~ 253 (420)
T 4h51_A 174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR 253 (420)
T ss_dssp EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence 99999999999887888999999999999999999999999999999999999999999999997644445566667788
Q ss_pred CCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 293 ~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.+++++++||||+|+++|+|+||+++++.+.+...++.+++..+.+.++++++.++|.+++.+|++.
T Consensus 254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~ 320 (420)
T 4h51_A 254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNN 320 (420)
T ss_dssp TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH
T ss_pred CceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCH
Confidence 8999999999999999999999998888888888889999999999999999999999999888764
No 2
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=6.4e-50 Score=387.44 Aligned_cols=301 Identities=26% Similarity=0.497 Sum_probs=255.6
Q ss_pred cccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHH-ccCCCCCCCCCcchHHHHHHH
Q 017967 57 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVT 135 (363)
Q Consensus 57 s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~~~~~~Y~~~~G~~~lr~ai 135 (363)
|+|++++..++++++++...++.+.++++|||++|.|.|.++.+++++.++++.. +. +....++|.+..|.++||+++
T Consensus 3 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~ai 81 (405)
T 3k7y_A 3 KLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLT 81 (405)
T ss_dssp CGGGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHH
T ss_pred chhhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHH
Confidence 5789999999999999999999988889999999998887887888999999987 54 334447899999999999999
Q ss_pred HHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCC
Q 017967 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (363)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (363)
++++.+.++..++++++.+++|.|+++|++++..++..+.| |+|++++|+|++|...++..|.+++.+|+.+++++++|
T Consensus 82 a~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 160 (405)
T 3k7y_A 82 QNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDIN 160 (405)
T ss_dssp HHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEEC
T ss_pred HHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcC
Confidence 99998887777777776444599999999999665544448 99999999999999999999999999998655679999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe
Q 017967 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (363)
Q Consensus 216 ~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 295 (363)
++.|++++++.+++.++++.++||||||.+++.+++++|+++|+++++++|+||+|.+|.+++.+.+..+++.+.+..++
T Consensus 161 ~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 240 (405)
T 3k7y_A 161 YDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIA 240 (405)
T ss_dssp HHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCC
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCc
Confidence 99999999864443445554556999999999999999999999999999999999999986433344566666666789
Q ss_pred EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 296 vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+|+++||||+|+++|||+||+++++++++.++++.+++....+..+++++.++|.+++.+|++.
T Consensus 241 ~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 304 (405)
T 3k7y_A 241 FSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQ 304 (405)
T ss_dssp EEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCH
T ss_pred EEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH
Confidence 9999999999999999999996666788888888888888777788899999999998887763
No 3
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=5e-46 Score=365.03 Aligned_cols=306 Identities=42% Similarity=0.723 Sum_probs=265.1
Q ss_pred hcccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHH--ccCCCCCCCCCcchHHH
Q 017967 54 VNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML--ERGENKEYLPIEGLAAF 131 (363)
Q Consensus 54 ~~~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~~~~~~Y~~~~G~~~l 131 (363)
..||+|++++..++++++++.+.++.++++.+|||++|.|.|..+++++.+.+++++..+. ......+|.+..|.+++
T Consensus 20 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~l 99 (448)
T 3meb_A 20 GSMSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLF 99 (448)
T ss_dssp --CCTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHH
T ss_pred chhhHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHH
Confidence 3467899999999999999999999999888999999999888889999999999987776 23344789999999999
Q ss_pred HHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCCCeEEEecc
Q 017967 132 NKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVPWSEYRYY 207 (363)
Q Consensus 132 r~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~ 207 (363)
|+++++++.+....++++++|+++||.||++|++++..++..+.+||+|++++|+|.++...++ ..|++++.+|++
T Consensus 100 r~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~ 179 (448)
T 3meb_A 100 LEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYL 179 (448)
T ss_dssp HHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCB
T ss_pred HHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecc
Confidence 9999999866544344578998888999999999976677778899999999999999999999 999999999986
Q ss_pred cCC-CCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHH
Q 017967 208 DPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (363)
Q Consensus 208 ~~~-~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (363)
+++ ++++|++.+++++++.+++++++++++||||||.+++.+++++|+++|+++|+++|+||+|++|.+++.+.+..++
T Consensus 180 ~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~ 259 (448)
T 3meb_A 180 RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAV 259 (448)
T ss_dssp CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHH
T ss_pred ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhH
Confidence 555 6899999999999865556889999999999999999999999999999999999999999999987422234566
Q ss_pred HHHHhcCCeEEEEEcCccccccccccceEEEEee--------CChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 287 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC--------SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 287 ~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~--------~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
..+.+..+++++++||||.||++|+|+||+.+++ ++++.++.+++++....+..+.+++.++|.+++.+|++
T Consensus 260 ~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 339 (448)
T 3meb_A 260 RMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD 339 (448)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred HHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcC
Confidence 6666778899999999999999999999986667 66666667888888877888889999999999988876
Q ss_pred c
Q 017967 359 K 359 (363)
Q Consensus 359 ~ 359 (363)
.
T Consensus 340 ~ 340 (448)
T 3meb_A 340 K 340 (448)
T ss_dssp H
T ss_pred h
Confidence 4
No 4
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=5.6e-45 Score=351.67 Aligned_cols=303 Identities=51% Similarity=0.914 Sum_probs=259.9
Q ss_pred ccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHH
Q 017967 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (363)
Q Consensus 56 ~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 135 (363)
+|+|+.++..++++++++.+.++.+.++++|+|++|.|.|..+++++.+.+.+++..........+|.+..|.+++|+++
T Consensus 1 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 80 (401)
T 7aat_A 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CChhhcCCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHH
Confidence 36889999999999999999999988888999999998778888888899999888776533447899999999999999
Q ss_pred HHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCC
Q 017967 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 214 (363)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 214 (363)
++++.+.++..+++++|++++|.||+++++++...+.. +.|||+|++++|+|..+...++..|.+++.+|+++++++++
T Consensus 81 a~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T 7aat_A 81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred HHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCcc
Confidence 99998888888889999776799999999988554432 36899999999999999999999999999999876667899
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
|++.+++.+++.+++++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++.+.+..++..+.+..+
T Consensus 161 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T 7aat_A 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCC
Confidence 99999998876445678999999999999999999999999999999999999999999998642112445555556778
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++++++||||.||++|+|+||++++..+++..+.+.++++...+..+.+++.++|.+++.+|++
T Consensus 241 ~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (401)
T 7aat_A 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNT 304 (401)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred cEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCC
Confidence 9999999999999999999999544466777777888888777777889999999999877654
No 5
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=3.2e-44 Score=348.99 Aligned_cols=300 Identities=42% Similarity=0.771 Sum_probs=260.2
Q ss_pred ccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHH
Q 017967 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (363)
Q Consensus 56 ~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 135 (363)
||.|.++...++++++++...++.+..+++|||++|.|.+.++.+++++.+.+++.+........+|.+..|.+++|+++
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 101 (420)
T 4f4e_A 22 MSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASV 101 (420)
T ss_dssp CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHH
T ss_pred cCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHH
Confidence 56788999999999999999998887789999999988777777778899999998877654447899999999999999
Q ss_pred HHHHhcCCCCcccCC--cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCC
Q 017967 136 AELLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 213 (363)
Q Consensus 136 a~~l~~~~~~~~~~~--~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 213 (363)
++++.+..+..++++ +|++ |+||+++++++..++..+.+||+|++++|+|.++...++..|++++.+|++++++++
T Consensus 102 a~~l~~~~~~~~~~~~~~i~~--t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 179 (420)
T 4f4e_A 102 QKLLLGDDSPLIAAGRVVTAQ--ALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNG 179 (420)
T ss_dssp HHHHHCTTCHHHHTTCEEEEE--EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTE
T ss_pred HHHhcCCCccccccCceEEEE--CCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCc
Confidence 999988766556678 7877 999999999997667778899999999999999999999999999999986556789
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC
Q 017967 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (363)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (363)
+|++.+++.+++.+++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++. +.+..++..+.+..
T Consensus 180 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~ 258 (420)
T 4f4e_A 180 VNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESI-EADAAAVRLFAAAN 258 (420)
T ss_dssp ECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCT-TGGGHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCc-chhhHHHHHHHhcC
Confidence 99999999998655567899999999999999999999999999999999999999999999863 12355666666677
Q ss_pred CeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 294 ~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++++++||||.||++|+|+||+++++++++.++++..+++...+..+.+++.++|.+++.+|++
T Consensus 259 ~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 323 (420)
T 4f4e_A 259 LNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLAS 323 (420)
T ss_dssp CCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHC
T ss_pred CCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcC
Confidence 89999999999999999999999655677777777777777766677888999999999877665
No 6
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.3e-43 Score=343.33 Aligned_cols=299 Identities=42% Similarity=0.759 Sum_probs=240.7
Q ss_pred ccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHH
Q 017967 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (363)
Q Consensus 56 ~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 135 (363)
.|+|++++..++++++++...++.+..+++|+|++|.|.+..+++.+.+.+.++ ......+|.+..|.++||+++
T Consensus 14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a-----~~~~~~~y~~~~g~~~lr~~i 88 (409)
T 4eu1_A 14 AQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA-----TLGTNMDYAPVTGIASFVEEA 88 (409)
T ss_dssp -------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC-----CCCSCCCCCCTTCCHHHHHHH
T ss_pred hhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc-----CccccccCCCCCCcHHHHHHH
Confidence 467889999999999999999999888899999999987777777777777766 233347899999999999999
Q ss_pred HHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCC
Q 017967 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 214 (363)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 214 (363)
++++.+....++++++|...+|.||+++++++..++..+ .+||+|++++|+|..+...++..|++++.+++++++++++
T Consensus 89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (409)
T 4eu1_A 89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL 168 (409)
T ss_dssp HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence 999877655555578886666999999999876544443 5899999999999999999999999999999865667899
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
|++.+++.+++.+++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++...+..++..+.+..+
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP 248 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence 99999999986545678888899999999999999999999999999999999999999998641112345555556678
Q ss_pred eEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++++++||||.||++|+|+||+.+++++++.+++++++++...+..+.+++.++|.++..+|++.
T Consensus 249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 313 (409)
T 4eu1_A 249 NLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDP 313 (409)
T ss_dssp CCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred cEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCH
Confidence 99999999999999999999975557778877778888887777778899999999998887753
No 7
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=6.8e-42 Score=329.28 Aligned_cols=297 Identities=40% Similarity=0.718 Sum_probs=253.7
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHH-HHccCCCCCCCCCcchHHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAE 137 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~G~~~lr~aia~ 137 (363)
|+.++..++++++.+...++.+..+++|+|++|.|.+.++++++++.+.+++.+ ........+|.+..|..++|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~ 81 (397)
T 3fsl_A 2 FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAP 81 (397)
T ss_dssp CTTCCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHH
Confidence 567899999999999999999888899999999877777777777999999988 7755344789888999999999999
Q ss_pred HHhcCCCCcccCC--cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCC
Q 017967 138 LLFGADNSVLKEQ--RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (363)
Q Consensus 138 ~l~~~~~~~~~~~--~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (363)
++....+..++++ +|++ |+||+++++++..++..+.+||+|+++.|+|..+...++..|.+++.+++.+++++++|
T Consensus 82 ~~~~~~~~~~~~~~~~i~~--t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 159 (397)
T 3fsl_A 82 LLFGADHPVLKQQRVATIQ--TLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR 159 (397)
T ss_dssp HHHCTTCHHHHTTCEEEEE--ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEEC
T ss_pred HHhcCCcccccccceEEEE--cCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCc
Confidence 9987766555788 8877 99999999998766677889999999999999999999999999999998555678999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe
Q 017967 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (363)
Q Consensus 216 ~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 295 (363)
++.+++.+++.+++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++. +.+..++..+.+..++
T Consensus 160 ~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (397)
T 3fsl_A 160 FNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGM-EEDAYAIRAIASAGLP 238 (397)
T ss_dssp HHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCT-TGGGHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCc-ccccHHHHHHHhcCCC
Confidence 999999998654567899999999999999999999999999999999999999999999862 1234566666567789
Q ss_pred EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 296 vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++++||||.+|++|+|+||+++.+++++.++++...++...+..+.+++.++|.+++.+|.+
T Consensus 239 ~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 301 (397)
T 3fsl_A 239 ALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLND 301 (397)
T ss_dssp EEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTS
T ss_pred EEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcC
Confidence 999999999999999999999444566776666766666665667778899999999877764
No 8
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=5.4e-41 Score=325.06 Aligned_cols=304 Identities=41% Similarity=0.752 Sum_probs=248.7
Q ss_pred ccccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHH-HHccCCCCCCCCCcchHHHHHH
Q 017967 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKV 134 (363)
Q Consensus 56 ~s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~G~~~lr~a 134 (363)
+|.|+++...+++++..+...++....+++|+|+.|.|.|.++++++++.+.+++.+ .......++|.+..|..++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 81 (412)
T 1yaa_A 2 ATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN 81 (412)
T ss_dssp TTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred cchhccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence 456788899999999999988887665689999999987777777788999999888 7654344679889999999999
Q ss_pred HHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCC
Q 017967 135 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 214 (363)
Q Consensus 135 ia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 214 (363)
+++++.+.++..+++++|++++|.||++|++++..++..+.+||+|+++.|+|..+...++..|++++.+++.+++++++
T Consensus 82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 161 (412)
T 1yaa_A 82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL 161 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCcc
Confidence 99999777776677889977779999999999866666678999999999999999999999999999999843446889
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
|++.+++.+++.+.+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++...+..++..+....+
T Consensus 162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (412)
T 1yaa_A 162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLS 241 (412)
T ss_dssp CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCC
Confidence 99999999986433467777799999999999999999999999999999999999999987531001234444444445
Q ss_pred ---eEEEEEcCccccccccccceEEEEee----CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 295 ---ELLVAQSYSKNLGLYAERIGAMNVVC----SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 295 ---~vi~~~S~SK~~~l~G~RvG~i~~v~----~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++++++||||.||++|+|+||+++++ .+++..+.+++++....+..+.+++.++|.++..+|+..
T Consensus 242 ~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 313 (412)
T 1yaa_A 242 TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETP 313 (412)
T ss_dssp TTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH
T ss_pred CCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCH
Confidence 89999999999998899999993226 246545556777776556667788999999998887654
No 9
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=4.5e-40 Score=316.43 Aligned_cols=298 Identities=44% Similarity=0.774 Sum_probs=229.3
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (363)
|+.++..++++++.+...+.....+++|||+.|.|.+.++..++++.+.+++.+.+.....++|.+..|..++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 81 (396)
T 2q7w_A 2 FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL 81 (396)
T ss_dssp CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHH
Confidence 56778888888888877776655568999999997666665567788988887765432346898899999999999999
Q ss_pred HhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHH
Q 017967 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (363)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 218 (363)
+.+..+..+++++|++++|.||++|++++..++..+.+||+|+++.|+|..+...++..|++++.++.++++++++|++.
T Consensus 82 ~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 161 (396)
T 2q7w_A 82 LFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDA 161 (396)
T ss_dssp HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHH
T ss_pred HhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHH
Confidence 87665544667888655699999999999665655679999999999999999999999999999998544578899999
Q ss_pred HHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 219 l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
+++.+++.+.+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ....++..+....+++++
T Consensus 162 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ 240 (396)
T 2q7w_A 162 LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLE-EDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHH-HHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc-chhHHHHHHHhcCCcEEE
Confidence 9999975433477888899999999999999999999999999999999999999987520 012345545445678999
Q ss_pred EEcCccccccccccceEEEEee--CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 299 AQSYSKNLGLYAERIGAMNVVC--SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~--~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++||||.+|++|+|+||+ ++ ++++.++.+++.+....+..+.+++.++|.++..+|+..
T Consensus 241 ~~s~sK~~~~~G~riG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 301 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGAC--TLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSND 301 (396)
T ss_dssp EEECTTTTTCGGGCCEEE--EEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSH
T ss_pred EEeccccccccccccceE--EEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcCh
Confidence 999999999999999999 54 567666667777766555667778999999998887654
No 10
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1.3e-39 Score=315.28 Aligned_cols=301 Identities=46% Similarity=0.821 Sum_probs=248.2
Q ss_pred cccCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHH-ccCCCCCCCCCcchHHHHHHH
Q 017967 57 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVT 135 (363)
Q Consensus 57 s~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~-~~~~~~~Y~~~~G~~~lr~ai 135 (363)
++|+++...+++++.++...++....+++|+|+.|.|.+.++++.+++.+.+++.+.. .....++|.+..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp CTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred chhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 3577888889999999998887765568999999998666666777889999988876 222346798899999999999
Q ss_pred HHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC-----CEEEEcCCCCcchHHHHhhCCCC-eEEEecccC
Q 017967 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDP 209 (363)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g-----d~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~~~ 209 (363)
++++.+.++..+++++|++++|.||++|++++..++..+.+| |+|+++.|+|..+...++..|++ ++.++++++
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence 999977767666788987667999999999997666667899 99999999999999999999999 999998544
Q ss_pred CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 210 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 210 ~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
+++++|++.+++.+.+.+.+++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++.+....++..+
T Consensus 164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 243 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243 (412)
T ss_dssp TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence 67889999999999864345678888999999999999999999999999999999999999999875200023345445
Q ss_pred HhcCCeEEEEEcCccccccccccceEEEEee--CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVC--SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~--~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
....++++++.||||.||++|+|+||+ ++ ++++.++.+++++.......+.+++.++|.++..+|+..
T Consensus 244 ~~~~~~~i~~~s~sK~~~~~G~riG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 313 (412)
T 1ajs_A 244 VSEGFELFCAQSFSKNFGLYNERVGNL--TVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDP 313 (412)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCEEEE--EEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSH
T ss_pred hccCCcEEEEEecccccCCCCcceEEE--EEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCc
Confidence 445688999999999999889999999 66 357766667777776555667778999999998887654
No 11
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=6.1e-39 Score=308.54 Aligned_cols=295 Identities=38% Similarity=0.651 Sum_probs=239.5
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (363)
|+.++..++++++++.+.++.+..+++|||+.|.|.+.++.+++++.+.+++.+.......++|.+..|..++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 81 (394)
T 2ay1_A 2 LGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGEL 81 (394)
T ss_dssp GGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHH
T ss_pred CccCccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHH
Confidence 56788889999999988888766668999999998666665567788999887766433346898889999999999999
Q ss_pred HhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHH
Q 017967 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (363)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 218 (363)
+.+. .+++++|++++|.||++|++++..++..+.+||+|+++.|+|..+...++..|.+++.+++++++++++|++.
T Consensus 82 ~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 158 (394)
T 2ay1_A 82 ILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEG 158 (394)
T ss_dssp HHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHH
T ss_pred HhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHH
Confidence 8543 1256788765699999999999665554569999999999999999999999999999998644568899999
Q ss_pred HHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 219 l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
+++.+++.+++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. .+..++..+....+++++
T Consensus 159 l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ 237 (394)
T 2ay1_A 159 MKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLE-EDAAGTRLIASRIPEVLI 237 (394)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHH-HHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcc-cchHHHHHHhhcCCCEEE
Confidence 9999986433467888899999999999999999999999999999999999999987520 012344444444678999
Q ss_pred EEcCccccccccccceEEEEee--CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 299 AQSYSKNLGLYAERIGAMNVVC--SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~--~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++||||.+|++|+|+||+ ++ ++++.++.+++.+....+..+.+++.++|.++..+|+..
T Consensus 238 ~~s~sK~~~~~G~riG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 298 (394)
T 2ay1_A 238 AASCSKNFGIYRERTGCL--LALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTP 298 (394)
T ss_dssp EEECTTTTTCGGGCEEEE--EEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSH
T ss_pred EEeccCCCcCcCCccceE--EEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcCh
Confidence 999999999999999999 55 567766667777765555667778999999988877654
No 12
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.5e-38 Score=309.82 Aligned_cols=285 Identities=16% Similarity=0.180 Sum_probs=217.5
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCC--CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDE--KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 136 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~--~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia 136 (363)
|+.+...++++|.++...++.++++ ++|+|++|.+ +..+..++++.+.+++.+.+......+|.+..|..++|++++
T Consensus 28 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~~-~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la 106 (427)
T 3dyd_A 28 PSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDP-TVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIA 106 (427)
T ss_dssp CCC----------------CCCCCTTSCCEECCCSCT-TTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHH
T ss_pred hhhHhhcccchHHHHHHHHhhcccCCCCEEeCCCcCC-CccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHH
Confidence 4577778888999999888877765 4599999996 444456678899999888775544468999999999999999
Q ss_pred HHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 137 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 137 ~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
+++.+. +..+++++|++ |.||++|++++.. .++.+||+|+++.|+|.++...++..|++++.++++++.++++|+
T Consensus 107 ~~~~~~-~~~~~~~~v~~--t~g~t~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 181 (427)
T 3dyd_A 107 SYYHCP-EAPLEAKDVIL--TSGCSQAIDLCLA--VLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDL 181 (427)
T ss_dssp HHHCBT-TBCCCGGGEEE--ESSHHHHHHHHHH--HHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECH
T ss_pred HHHhhc-CCCCChHHEEE--ecCcHHHHHHHHH--HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCH
Confidence 998766 67778899988 9999999999843 346799999999999999999999999999999987666788999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v 296 (363)
+.+++.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++. ...++..+ ....++
T Consensus 182 ~~l~~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~--~~~~~~~~-~~~~~v 255 (427)
T 3dyd_A 182 KQLEYLIDE---KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC--KYEPLATL-STDVPI 255 (427)
T ss_dssp HHHHSSCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC--CCCCGGGG-CSSCCE
T ss_pred HHHHHHhcc---CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC--cCccHHHh-CCCCcE
Confidence 999988863 467788899999999999999999999999999999999999999987642 12232222 344678
Q ss_pred EEEEcCccccccccccceEEEEeeCCh--hHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 297 LVAQSYSKNLGLYAERIGAMNVVCSSS--DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 297 i~~~S~SK~~~l~G~RvG~i~~v~~~~--~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++++||||.|+++|+|+||+ +++++ ...+.+++++...... .++++.++|.++..+|+.
T Consensus 256 i~~~S~sK~~~~~G~riG~~--~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~ 316 (427)
T 3dyd_A 256 LSCGGLAKRWLVPGWRLGWI--LIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCR 316 (427)
T ss_dssp EEEEESTTTSSCGGGCCEEE--EEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHH
T ss_pred EEEeeccccCCCcCcceEEE--EecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999 66642 1112256666555433 468999999999888773
No 13
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=2.2e-38 Score=304.37 Aligned_cols=270 Identities=18% Similarity=0.182 Sum_probs=215.3
Q ss_pred CCCCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhc
Q 017967 64 MAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (363)
Q Consensus 64 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~ 141 (363)
..+++++..+...++.. ..++.|+|+.|+|. ..+++.+.+++.+.+.... .+|.+..|..++|+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~ 83 (385)
T 1b5p_A 10 AMKPSATVAVNAKALELRRQGVDLVALTAGEPD-----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREALAEKFRR 83 (385)
T ss_dssp HCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCS-----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHH
T ss_pred hcCcchHHHHHHHHHHHHhcCCCEEEecCCCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence 34556666666554322 22478999999862 1234677777766654433 5798888999999999999988
Q ss_pred CCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
.++..+++++|++ |+||+++++++ +..++.+||+|+++.|+|..+...++..|++++.+++++++++.+|++.+++
T Consensus 84 ~~g~~~~~~~i~~--t~g~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (385)
T 1b5p_A 84 ENGLSVTPEETIV--TVGGSQALFNL--FQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRR 159 (385)
T ss_dssp TTCCCCCGGGEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHT
T ss_pred HhCCCCChHHEEE--cCChHHHHHHH--HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHH
Confidence 7887788899988 99999999998 4445789999999999999999999999999999998644567899999998
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
+++ ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ . ..++..+ +. +++++++|
T Consensus 160 ~l~---~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~--~~~~~~~-~~-~~~i~~~s 231 (385)
T 1b5p_A 160 AIT---PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-E--HFSPGRV-AP-EHTLTVNG 231 (385)
T ss_dssp TCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-C--CCCGGGT-CT-TTEEEEEE
T ss_pred hcC---CCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-C--CCCHHHc-CC-CCEEEEEe
Confidence 876 246778889999999999999999999999999999999999999998753 1 1222222 22 78999999
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|||.||++|+|+||+ +++ ++ +++.+.........+++.+.|.++..+|+.
T Consensus 232 ~SK~~~~~G~RiG~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 281 (385)
T 1b5p_A 232 AAKAFAMTGWRIGYA--CGP-KE----VIKAMASVSRQSTTSPDTIAQWATLEALTN 281 (385)
T ss_dssp STTTTTCGGGCCEEE--ECC-HH----HHHHHHHHHHTTTCSCCHHHHHHHHHHHHC
T ss_pred chhhcCCcccceEEE--EeC-HH----HHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence 999999999999999 665 66 555565555555668999999998887754
No 14
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=2e-37 Score=300.49 Aligned_cols=287 Identities=23% Similarity=0.311 Sum_probs=221.3
Q ss_pred CCCCCCCCchhhHHHHHhcCCC----CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHH
Q 017967 61 GVTMAPPDPILGVSEAFKADTD----EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 136 (363)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia 136 (363)
......+++++.+...++.... .++|+|++|.|.+.+++..+++.+.+++.+...... .+|.+..|.++||++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia 90 (418)
T 3rq1_A 12 AKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGYAPIAGIPDFLCAAE 90 (418)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSCCCTTCCHHHHHHHH
T ss_pred cCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCCCCCCChHHHHHHHH
Confidence 3445567788888776654332 378999999998877778888999888766443222 67999999999999999
Q ss_pred HHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCH
Q 017967 137 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (363)
Q Consensus 137 ~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (363)
+++.+.+++. .+++|++ |+||++++.++ +..++.+||+|+++.|+|..|...++..|++++.+|++++ ++++|+
T Consensus 91 ~~~~~~~~~~-~~~~i~~--t~g~~~al~~~--~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~ 164 (418)
T 3rq1_A 91 KECFGNFRPE-GHIRSIA--TAGGTGGIHHL--IHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDE-HNNFNH 164 (418)
T ss_dssp HHHHGGGCCS-SEEEEEE--ESHHHHHHHHH--HHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCT-TSSBCH
T ss_pred HHHhcccCcc-ccccEEE--CCchHHHHHHH--HHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCC-CCCcCH
Confidence 9987765432 1338877 99999999988 4455789999999999999999999999999999998543 479999
Q ss_pred HHHHHHHHcC--CCCcEEEEEcCC-CCCCCCCCCHHHHHHHHHHHH------hcCCeEEEecCCCCCcCCCCCCchhHHH
Q 017967 217 EGMIADIKAA--PGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVAYQGFASGSLDNDASSVR 287 (363)
Q Consensus 217 ~~l~~~l~~~--~~~~~~~~i~~p-~NPTG~~~s~~~~~~i~~~~~------~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (363)
+.|++.+++. ++.+.++++++| |||||.+++.+++++|+++|+ ++|+++|+||+|.+|.+++ ....
T Consensus 165 ~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~-----~~~~ 239 (418)
T 3rq1_A 165 EAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEK-----DEVR 239 (418)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCH-----HHHH
T ss_pred HHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCCh-----HHHH
Confidence 9999998741 123457888999 999999999999999999999 8999999999999998652 1122
Q ss_pred HHHh----cCCe--EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 288 LFAT----RGME--LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 288 ~~~~----~~~~--vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.+.. ..++ +++++||||.||++|+|+||+++++++++.++++.+.........+.+++.++|.++..+|++.
T Consensus 240 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 317 (418)
T 3rq1_A 240 AFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADP 317 (418)
T ss_dssp GGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCH
T ss_pred HHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCH
Confidence 2211 2334 6899999999999999999993332468755555444333333445689999999998887664
No 15
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=2.4e-37 Score=299.49 Aligned_cols=289 Identities=21% Similarity=0.295 Sum_probs=223.2
Q ss_pred CCCCCCCCCchhhHHHHHhcCC----CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHH
Q 017967 60 EGVTMAPPDPILGVSEAFKADT----DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (363)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 135 (363)
.++....+++++++...++... ..++|+|++|.|.+.++...+++.+.+++.+..... ..+|.+..|.+++|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~l 88 (413)
T 3t18_A 10 RATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSH-IASYAPIEGEKDYRKIV 88 (413)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHH-HHSCCCTTCCHHHHHHH
T ss_pred hcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCccc-ccCcCCCCCCHHHHHHH
Confidence 3566667888988887765433 237999999999777777778889988876643222 26798889999999999
Q ss_pred HHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCC
Q 017967 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (363)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (363)
++++.+..++. ++++|++ |+||++++.++ +..++.+||+|+++.|+|..|...++..|++++.+|+.++ ++++|
T Consensus 89 a~~~~~~~~~~-~~~~i~~--t~g~~~al~~~--~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d 162 (413)
T 3t18_A 89 IDTLFGPYKPE-GYISAIA--TPGGTGAIRSA--IFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTD-DFAFN 162 (413)
T ss_dssp HHHHHGGGCCS-SEEEEEE--ESHHHHHHHHH--HHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCT-TSSBC
T ss_pred HHHHhcccCcc-ccCcEEE--cCccHHHHHHH--HHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCC-CCCcC
Confidence 99987664432 3458888 99999999998 4455789999999999999999999999999999998543 47999
Q ss_pred HHHHHHHHHcC--CCCcEEEEEcCC-CCCCCCCCCHHHHHHHHHHHH------hcCCeEEEecCCCCCcCCCCCCchhHH
Q 017967 216 FEGMIADIKAA--PGGSFILLHGCA-HNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVAYQGFASGSLDNDASSV 286 (363)
Q Consensus 216 ~~~l~~~l~~~--~~~~~~~~i~~p-~NPTG~~~s~~~~~~i~~~~~------~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (363)
++.|++.+++. ++...++++++| |||||.+++.+++++|+++|+ ++|+++|+||+|.+|.+++. ...++
T Consensus 163 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~--~~~~~ 240 (413)
T 3t18_A 163 IDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGD--QQRKF 240 (413)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSS--TTTGG
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChh--hHHHH
Confidence 99999998741 123447888999 999999999999999999999 89999999999999987642 12222
Q ss_pred HH-HHhcCCe--EEEEEcCccccccccccceEEEEee--CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 287 RL-FATRGME--LLVAQSYSKNLGLYAERIGAMNVVC--SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 287 ~~-~~~~~~~--vi~~~S~SK~~~l~G~RvG~i~~v~--~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.. +.+..++ +++++||||.||++|+|+||+ ++ .+++.++.+.+.........+.+++.++|.++..+|++.
T Consensus 241 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 241 FEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAA--VGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAE 316 (413)
T ss_dssp GGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEE--EEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHH
T ss_pred HHHHhhcCCCeeEEEEEecCccCCCcCcCcEEE--EEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcCh
Confidence 11 1122334 588999999999999999999 55 357755555443332223345678999999998887654
No 16
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=296.99 Aligned_cols=279 Identities=17% Similarity=0.169 Sum_probs=216.4
Q ss_pred cCCCCCCCCCchhhHHHHHhc------CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKA------DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFN 132 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~------~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr 132 (363)
|..+. .+++.+..+.+.+.. ...+++|||+.|.+ +.. .++.+.+++.+.+......+|++..|.++||
T Consensus 28 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~----~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr 101 (447)
T 3b46_A 28 YFTSN-TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFF-SYS----PPQFAIKEAQKALDIPMVNQYSPTRGRPSLI 101 (447)
T ss_dssp HHHSC-CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSC-SSC----CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHH
T ss_pred ccccc-cCccHHHHHHHHHHhhccchhccCCCeEEccCCCC-CCC----CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHH
Confidence 34444 555666666655522 13358999999986 222 3567777777665431236798888999999
Q ss_pred HHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCC--
Q 017967 133 KVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-- 210 (363)
Q Consensus 133 ~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-- 210 (363)
+++++++...++..+++++|++ |.||+++++++ +..++.+||+|++++|+|..+...++..|.+++.+++++++
T Consensus 102 ~~ia~~l~~~~g~~~~~~~v~~--t~G~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 177 (447)
T 3b46_A 102 NSLIKLYSPIYNTELKAENVTV--TTGANEGILSC--LMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKEL 177 (447)
T ss_dssp HHHHHHHTTTTTSCCCGGGEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGG
T ss_pred HHHHHHHHHhcCCCCChhhEEE--eCCHHHHHHHH--HHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCcccc
Confidence 9999999877777778889988 99999999998 44457799999999999999999999999999999986432
Q ss_pred --------CCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 211 --------TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 211 --------~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
++++|++.|++.++ ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.
T Consensus 178 ~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~--- 251 (447)
T 3b46_A 178 DQRNTRGEEWTIDFEQFEKAIT---SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS--- 251 (447)
T ss_dssp GTSCBCSTTSEECHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC---
T ss_pred ccccccccCcccCHHHHHHhhc---cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC---
Confidence 57899999998886 3567788899999999999999999999999999999999999999987641
Q ss_pred hhHHHHH-HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 283 ASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 283 ~~~~~~~-~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
..++..+ .+..++++++.||||.||++|+|+||+ ++.+++ +++.+........++++.+.|.++...|+..
T Consensus 252 ~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~--~~~~~~----l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~ 323 (447)
T 3b46_A 252 FTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWV--LSLNAE----LLSYAAKAHTRICFASPSPLQEACANSINDA 323 (447)
T ss_dssp CCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEE--ECSCHH----HHHHHHHHHHHHTSSCCHHHHHHHHHHHHHH
T ss_pred CcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEE--EeCCHH----HHHHHHHHHhhccCCCChHHHHHHHHHHhCC
Confidence 1122212 123368999999999999999999999 773477 4555555444445678999999988877654
No 17
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=4.1e-35 Score=281.66 Aligned_cols=267 Identities=18% Similarity=0.161 Sum_probs=205.7
Q ss_pred CCCCCCCCchhhHHH---HHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHH
Q 017967 61 GVTMAPPDPILGVSE---AFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 137 (363)
Q Consensus 61 ~v~~~~~~~~~~~~~---~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 137 (363)
++....++++..+.. .++.+. +++|+|+.|.+. ..+++.+.+++.+.+.... .+|.+..|..++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~l~~g~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~ 79 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARRAEEAG-RRIIHMEVGQPG-----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIAR 79 (391)
T ss_dssp STTCCCCCTTHHHHHHHHHHHHTT-CCCEECCCSSCS-----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHH
T ss_pred hHhhcCcchHHHHHHHHHHHHhcC-CCeEEccCCCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHH
Confidence 444445555555443 444443 489999999852 2236678888877665433 679888899999999999
Q ss_pred HHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHH
Q 017967 138 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 217 (363)
Q Consensus 138 ~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 217 (363)
++...++..+++++|++ |+||+++++++ +..++.+||+|+++.|+|..+...++..|++++.++++++.++.+|++
T Consensus 80 ~~~~~~g~~~~~~~v~~--t~g~~~al~~~--~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 155 (391)
T 3h14_A 80 LYGEWYGVDLDPGRVVI--TPGSSGGFLLA--FTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPA 155 (391)
T ss_dssp HHHHHHCCCCCGGGEEE--ESSHHHHHHHH--HHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHH
T ss_pred HHHHHhCCCCCHHHEEE--ecChHHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHH
Confidence 99877777778899988 99999999998 444567999999999999999999999999999999865556788999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEE
Q 017967 218 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (363)
Q Consensus 218 ~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 297 (363)
.+++. +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. .+. ....++++
T Consensus 156 ~l~~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~---~~~---~~~~~~~i 223 (391)
T 3h14_A 156 DFAGL------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA---VTA---LELTDECY 223 (391)
T ss_dssp HHTTS------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC---CCG---GGTCSSSE
T ss_pred HHHhc------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC---cCh---hhcCCCEE
Confidence 98765 3456777899999999999999999999999999999999999999886421 121 23357899
Q ss_pred EEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 298 ~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+++||||.+|++|+|+||+ +++ ++ +++.+.........+++.++|.++...|.
T Consensus 224 ~~~s~sK~~g~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 224 VINSFSKYFSMTGWRVGWM--VVP-ED----QVRVVERIAQNMFICAPHASQVAALAALD 276 (391)
T ss_dssp EEEESSSTTCCTTSCCEEE--ECC-GG----GHHHHHHHHHHTTCCCCHHHHHHHHHHTT
T ss_pred EEEechhccCCccceeEEE--EeC-HH----HHHHHHHHHhhhccCCCHHHHHHHHHHhC
Confidence 9999999999999999999 665 55 45556555556667889999998877665
No 18
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.3e-35 Score=287.91 Aligned_cols=276 Identities=15% Similarity=0.094 Sum_probs=219.4
Q ss_pred cCCCCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHH
Q 017967 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAE 137 (363)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~ 137 (363)
+.++...+++.+..+...... ++.|+|+.|.+. ..+++.+.+++.+.+.... ..+|++..|..++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~---~~~i~l~~g~~~-----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~ 78 (422)
T 3fvs_A 7 ARRLDGIDYNPWVEFVKLASE---HDVVNLGQGFPD-----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILAS 78 (422)
T ss_dssp CGGGTTCCCCHHHHHHHHHHT---SCCEECCCSSCS-----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHH
T ss_pred HHHhhccCccHHHHHHHHhhc---CCceEeCCCCCC-----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHH
Confidence 345666667777777655543 479999999862 2346778888777664422 3689888899999999999
Q ss_pred HHhcCCCCcccC-CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc--------
Q 017967 138 LLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-------- 208 (363)
Q Consensus 138 ~l~~~~~~~~~~-~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-------- 208 (363)
++...++..+++ ++|++ |+||+++++++ +..++.+||+|+++.|+|..+...++..|.+++.++++.
T Consensus 79 ~~~~~~g~~~~~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~ 154 (422)
T 3fvs_A 79 FFGELLGQEIDPLRNVLV--TVGGYGALFTA--FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGEL 154 (422)
T ss_dssp HHHHHHTCCCCHHHHEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSC
T ss_pred HHHHhhCCCCCCCCcEEE--ECChHHHHHHH--HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccccc
Confidence 998777777777 69988 99999999988 444467999999999999999999999999999999864
Q ss_pred --CCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHH
Q 017967 209 --PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (363)
Q Consensus 209 --~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (363)
..++.+|++.+++.++ ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++
T Consensus 155 ~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~ 229 (422)
T 3fvs_A 155 GSSSNWQLDPMELAGKFT---SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QHISI 229 (422)
T ss_dssp CBGGGSBCCHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCG
T ss_pred ccccCCCCCHHHHHhhcC---CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CCCCh
Confidence 1245689999998876 3577888899999999999999999999999999999999999999987642 12233
Q ss_pred HHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 287 RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 287 ~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
..+....++++++.||||.||++|+|+||+ +++ ++ +++.+.........+++.+.|.++...|+.
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWV--LGP-DH----IMKHLRTVHQNSVFHCPTQSQAAVAESFER 294 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEE--ECC-HH----HHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred hhcccccCcEEEEecchhccCCccceEEEE--EeC-HH----HHHHHHHHHhhccCCCCcHHHHHHHHHHhh
Confidence 333223468999999999999999999999 665 66 555565555555668899999999887764
No 19
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.3e-34 Score=287.63 Aligned_cols=231 Identities=16% Similarity=0.101 Sum_probs=189.5
Q ss_pred CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhh
Q 017967 118 ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFND 196 (363)
Q Consensus 118 ~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~ 196 (363)
....|.+..|..++|+++++++.+.++..+++++|++ |.|+++++.++ +..++ .+||.|+++.|+|..+...++.
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~--~~~l~~~~gd~Vlv~~p~y~~~~~~~~~ 201 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFL--TDGASPGVHLM--MQLLIRNEKDGILVPIPQYPLYSASIAL 201 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEE--ESSSHHHHHHH--HHHHCCSTTEEEEEEESCCTHHHHHHHH
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEE--cCCHHHHHHHH--HHHHcCCCCCEEEEeCCCcHhHHHHHHH
Confidence 4478999999999999999999877777788999988 99999999988 34445 6999999999999999999999
Q ss_pred CCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 197 ARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 197 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
.|.+++.++++++.++++|++.|++++++. ..++++++++|||||||.+++.+++++|+++|+++|+++|+||+|++
T Consensus 202 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~ 281 (500)
T 3tcm_A 202 HGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQE 281 (500)
T ss_dssp TTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred cCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccc
Confidence 999999999987667899999999999852 11466777889999999999999999999999999999999999999
Q ss_pred CcCCCCCCchhHHHHHH------hcCCeEEEEEcCcccc-ccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCch
Q 017967 274 FASGSLDNDASSVRLFA------TRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPP 346 (363)
Q Consensus 274 ~~~~~~~~~~~~~~~~~------~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~ 346 (363)
+.+++. ....++..+. ....++++++||||.| |++|+|+||+++...+++ +++.+.+.. ....+++.
T Consensus 282 ~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~l~~~~-~~~~~~~~ 355 (500)
T 3tcm_A 282 NIYVDN-KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAP----VREQIYKIA-SVNLCSNI 355 (500)
T ss_dssp CBCCTT-CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTT----HHHHHHHHH-HTTCCCCH
T ss_pred cccCCC-CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHH----HHHHHHHHH-hcccCCCH
Confidence 988532 1233443332 1224689999999999 899999999944334577 445554443 35678999
Q ss_pred HHHHHHhccccc
Q 017967 347 MLLGIQLSSMNG 358 (363)
Q Consensus 347 ~~q~~~~~~l~~ 358 (363)
++|.++..+|+.
T Consensus 356 ~~q~~~~~~l~~ 367 (500)
T 3tcm_A 356 TGQILASLVMNP 367 (500)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHhcC
Confidence 999999888764
No 20
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=290.92 Aligned_cols=287 Identities=17% Similarity=0.158 Sum_probs=206.3
Q ss_pred CCCCCCCCchhhHHHHHhcC--CCC-----CcEEeeccccCCCCCCc---------------------cccHHHHHHHHH
Q 017967 61 GVTMAPPDPILGVSEAFKAD--TDE-----KKLNLGVGAYRTEELQP---------------------YVLDVVKKAENL 112 (363)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~--~~~-----~~i~l~~g~~~~~~~~~---------------------~~~~~v~~a~~~ 112 (363)
++..+-..++....++++++ +.. .+|++.+|.|......+ ++.+.+ ++..+
T Consensus 34 ~~~y~~rg~~~~~a~~~~~~~~~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~-~~~~~ 112 (498)
T 3ihj_A 34 AVEYAVRGPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAK-KRARR 112 (498)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHH-HHHHH
T ss_pred HhhhhhcCHHHHHHHHHHHHHhccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHH-HHHHH
Confidence 34444556666666665543 122 78999999873211101 122222 33333
Q ss_pred HHcc---CCCCCCCCCcchHHHHHHHHHHHhcCC-CCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCC----EEEEcC
Q 017967 113 MLER---GENKEYLPIEGLAAFNKVTAELLFGAD-NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA----KVLISS 184 (363)
Q Consensus 113 ~~~~---~~~~~Y~~~~G~~~lr~aia~~l~~~~-~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd----~Vlv~~ 184 (363)
.+.. .....|++..|.+++|+++++++...+ |.++++++|++ |.|+++++.++. ..++.+|| .|+++.
T Consensus 113 ~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~--t~G~~~ai~~~~--~~l~~~gd~~~d~Vlv~~ 188 (498)
T 3ihj_A 113 ILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYL--TTGASDGISTIL--KILVSGGGKSRTGVMIPI 188 (498)
T ss_dssp HHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEE--ESSHHHHHHHHH--HHHCCCCGGGSEEEEEEE
T ss_pred HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEE--cCCHHHHHHHHH--HHHcCCCCCCCCEEEEeC
Confidence 3322 123679999999999999999998776 47788999988 999999999884 34466765 999999
Q ss_pred CCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC--CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 017967 185 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (363)
Q Consensus 185 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~--~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~ 262 (363)
|+|+.|...++..|++++.++++++.+|++|++.|++.+++.+. ++++++++|||||||.+++.+++++|+++|+++|
T Consensus 189 p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~ 268 (498)
T 3ihj_A 189 PQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEK 268 (498)
T ss_dssp SCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999997766789999999999985321 3667777899999999999999999999999999
Q ss_pred CeEEEecCCCCCcCCCCCCchhHHHHHHh-------cCCeEEEEEcCcccc-ccccccceEEEEeeCChhHHHHHHHHHH
Q 017967 263 HIPFFDVAYQGFASGSLDNDASSVRLFAT-------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~-------~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~~~~~~~l~ 334 (363)
++||+||+|.++.+++. ....++..+.. ...++++++||||.| |++|+|+||+++++.+++ +++.+.
T Consensus 269 ~~li~De~y~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~----l~~~l~ 343 (498)
T 3ihj_A 269 LFLLADEVYQDNVYSPD-CRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPE----IKGQLV 343 (498)
T ss_dssp CEEEEECTTTTCBCCTT-CCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHH----HHHHHH
T ss_pred cEEEEEcCccccccCCC-CCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHH----HHHHHH
Confidence 99999999999998742 12334444322 234689999999999 899999999944446677 455555
Q ss_pred hhhccccCCCchHHHHHHhccccc
Q 017967 335 RLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 335 ~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.... .+.+++.++|.++..+++.
T Consensus 344 ~~~~-~~~~~~~~~q~a~~~~l~~ 366 (498)
T 3ihj_A 344 KLLS-VRLCPPVSGQAAMDIVVNP 366 (498)
T ss_dssp HHHH-HSCCCCHHHHHHHHHHTCC
T ss_pred HHHh-ccCCCCHHHHHHHHHHhcC
Confidence 4433 5678899999999888764
No 21
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=2.3e-35 Score=283.04 Aligned_cols=273 Identities=17% Similarity=0.192 Sum_probs=215.3
Q ss_pred CCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCC
Q 017967 65 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (363)
.+++++..+...++.. ++.|+|+.|.+. ...++.+.+++.+.+.... .+|++..|..++|+++++++...++
T Consensus 10 ~~~~~~~~~~~~~~~~--~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~~~~g 81 (389)
T 1gd9_A 10 VSASEIRKLFDIAAGM--KDVISLGIGEPD-----FDTPQHIKEYAKEALDKGL-THYGPNIGLLELREAIAEKLKKQNG 81 (389)
T ss_dssp SCCCHHHHHHHHHHTC--SSCEECCCCSCS-----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CChhHHHHHHHHHhhh--cCeEecCCCCCC-----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 4566777777776654 479999999852 1135677777776664433 5798888999999999999876556
Q ss_pred CcccCCc-EEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 145 SVLKEQR-VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 145 ~~~~~~~-i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
..+++++ |++ |.||+++++++ +..++.+||+|++++|+|..+...++..|++++.+|+++++++.+|++.+++.+
T Consensus 82 ~~~~~~~~v~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 157 (389)
T 1gd9_A 82 IEADPKTEIMV--LLGANQAFLMG--LSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYV 157 (389)
T ss_dssp CCCCTTTSEEE--ESSTTHHHHHH--HTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHC
T ss_pred CCCCCCCeEEE--cCChHHHHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhc
Confidence 5566788 988 99999999988 333467999999999999999999999999999999854345778999999988
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+....++++++.|||
T Consensus 158 ~~---~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~s 232 (389)
T 1gd9_A 158 TD---KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA--RHYSIASLDGMFERTITVNGFS 232 (389)
T ss_dssp CT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGEEEEEEST
T ss_pred Cc---CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CCCCHhhccCCCCCEEEEecCh
Confidence 63 466778899999999999999999999999999999999999999987532 1122222211235799999999
Q ss_pred cccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 304 K~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
|.+|++|+|+||+ +++ ++ +++.+.........+++.++|.++...|+..+.
T Consensus 233 K~~~~~G~r~G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 283 (389)
T 1gd9_A 233 KTFAMTGWRLGFV--AAP-SW----IIERMVKFQMYNATCPVTFIQYAAAKALKDERS 283 (389)
T ss_dssp TTTTCGGGCCEEE--ECC-HH----HHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH
T ss_pred hhcCCcccceEEE--EEC-HH----HHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc
Confidence 9999999999999 665 66 566666555555678899999999888876443
No 22
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=3.6e-35 Score=287.89 Aligned_cols=269 Identities=13% Similarity=0.161 Sum_probs=208.6
Q ss_pred CCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcC
Q 017967 65 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGA 142 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~ 142 (363)
..++++..+..... .+++|+|+.|.|. . ..++.+.+.+++.+.+... ...+|++..|.++||+++++++...
T Consensus 61 ~~~s~~~~~~~~~~---~~~~i~l~~g~p~-~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 134 (448)
T 3aow_A 61 MRASEVRELLKLVE---TSDIISLAGGLPN-P--KTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR 134 (448)
T ss_dssp CCCCHHHHHHHHHH---TSSSEECCCCCCC-G--GGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHhcc---CCCcEeCCCCCCC-c--hhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHh
Confidence 34555655554433 3579999999873 2 2345677777776665321 1257988899999999999998655
Q ss_pred CCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHH
Q 017967 143 DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 143 ~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
++.+ ++++|++ |.|++++++++.. .++.+||.|+++.|+|..+...++..|++++.+|+++ .++|++.|++.
T Consensus 135 ~g~~-~~~~v~~--t~G~~~al~~~~~--~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~---~g~d~~~L~~~ 206 (448)
T 3aow_A 135 YGIS-QDNDIMI--TSGSQQALDLIGR--VFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDD---EGMKVEILEEK 206 (448)
T ss_dssp HCCC-TTSEEEE--ESSHHHHHHHHHH--HHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET---TEECHHHHHHH
T ss_pred cCcC-ChhhEEE--eCcHHHHHHHHHH--HHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCC---CCCCHHHHHHH
Confidence 5655 6789988 9999999999843 3467999999999999999999999999999999853 25999999999
Q ss_pred HH----cCCCCcEE-EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEE
Q 017967 223 IK----AAPGGSFI-LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (363)
Q Consensus 223 l~----~~~~~~~~-~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 297 (363)
++ +.+ ++++ +++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ +..++++
T Consensus 207 l~~~~~~~~-~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~--~~~~~~~~-~~~~~vi 282 (448)
T 3aow_A 207 LKELKSQGK-KVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGN--PEKKIKAL-DNEGRVI 282 (448)
T ss_dssp HHHHHHTTC-CEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSC--CCCCTGGG-CTTSCEE
T ss_pred HhhhhccCC-CCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC--CCcCHHhc-CCCCCEE
Confidence 87 322 3445 57899999999999999999999999999999999999999987542 12222222 3446899
Q ss_pred EEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 298 ~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++.||||.++ +|+|+||+ +++ ++ +++.+.........+++.++|.++..+|+..
T Consensus 283 ~~~S~SK~~~-~GlriG~v--~~~-~~----l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~ 336 (448)
T 3aow_A 283 YLGTFSKILA-PGFRIGWM--VGD-PG----IIRKMEIAKQSTDLCTNVFGQVVAWRYVDGG 336 (448)
T ss_dssp EEEESTTTTC-GGGCCEEE--EEC-HH----HHHHHHHHHHHHHSSCCHHHHHHHHHHHHTT
T ss_pred EEccchhhcc-ccccEEEE--EeC-HH----HHHHHHHHHHHhcCCCCHHHHHHHHHHHHhC
Confidence 9999999999 99999999 776 66 4555554444445678999999998888653
No 23
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2e-35 Score=285.33 Aligned_cols=272 Identities=14% Similarity=0.086 Sum_probs=213.7
Q ss_pred CCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcC
Q 017967 63 TMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA 142 (363)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~ 142 (363)
...+++.+..+... ...+++|+|+.|.+. ..+++.+.+++.+.+......+|++..|..++|+++++++...
T Consensus 6 ~~~~~~~~~~~~~~---~~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~ 77 (410)
T 3e2y_A 6 EGLDSNVWVEFTKL---AADPSVVNLGQGFPD-----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKI 77 (410)
T ss_dssp TTCCCCHHHHTTTT---TTSTTSEECSSCCCC-----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred ccCCccHHHHHHHH---hcCCCeEEecCCCCC-----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHH
Confidence 33444444443322 233589999999862 2246788888877765433368988889999999999999876
Q ss_pred CCCcccC-CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc---------CCCC
Q 017967 143 DNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD---------PKTV 212 (363)
Q Consensus 143 ~~~~~~~-~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~---------~~~~ 212 (363)
++..+++ ++|++ |+|+++++.++ +..++.+||+|+++.|+|..+...++..|.+++.++++. +.++
T Consensus 78 ~~~~~~~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~ 153 (410)
T 3e2y_A 78 YQRQIDPNEEILV--AVGAYGSLFNS--IQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDW 153 (410)
T ss_dssp HTSCCCTTTSEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGE
T ss_pred hCCCCCCCCCEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCC
Confidence 7777777 79988 99999999988 444467999999999999999999999999999999852 2356
Q ss_pred CCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc
Q 017967 213 GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (363)
Q Consensus 213 ~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (363)
.+|++.++++++ ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+...
T Consensus 154 ~~d~~~l~~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~ 228 (410)
T 3e2y_A 154 TFDPRELESKFS---SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVKIATLPGM 228 (410)
T ss_dssp ECCHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTC
T ss_pred cCCHHHHHhhcC---CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCCHHHcCCc
Confidence 689999998875 3567788899999999999999999999999999999999999999987642 12233333233
Q ss_pred CCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 293 ~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.++++++.||||.||++|+|+||+ +++ ++ +++.+........++++.+.|.++...|+.
T Consensus 229 ~~~~i~~~S~sK~~g~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (410)
T 3e2y_A 229 WERTITIGSAGKTFSVTGWKLGWS--IGP-AH----LIKHLQTVQQNSFYTCATPLQAALAEAFWI 287 (410)
T ss_dssp GGGEEEEEEHHHHSSCGGGCCEEE--ECC-HH----HHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred cCeEEEEecchhhcCCCCceEEEE--EEC-HH----HHHHHHHHHHhhccCCChHHHHHHHHHHHh
Confidence 468999999999999999999999 665 66 556566555556678899999999887763
No 24
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=4.6e-35 Score=281.50 Aligned_cols=269 Identities=13% Similarity=0.118 Sum_probs=210.9
Q ss_pred CCCchhhHHHHHhc---CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcC
Q 017967 66 PPDPILGVSEAFKA---DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA 142 (363)
Q Consensus 66 ~~~~~~~~~~~~~~---~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~ 142 (363)
++.++..+...... +..+++|+|+.|.+. ...++.+.+++.+.... ..+|++..|..++|+++++++...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~ 82 (396)
T 3jtx_A 10 KPYPFARLHEAMQGISAPEGMEAVPLHIGEPK-----HPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLKRR 82 (396)
T ss_dssp CSCHHHHHHHHTTTCCCCTTCCCEECSCCSCC-----SCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHhhhhccCCCeEEeCCcCCC-----CCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHHHh
Confidence 34455555443332 334589999999852 12457788887776542 267988899999999999999877
Q ss_pred CCCc-ccCC-cEEEEeccchhHHHHHHHHHHHHhCCC-----CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCC
Q 017967 143 DNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (363)
Q Consensus 143 ~~~~-~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (363)
++.. ++++ +|++ |+|++++++++ +..++.+| |+|+++.|+|..+...++..|++++.+++ +++++.+|
T Consensus 83 ~g~~~~~~~~~i~~--t~g~~~al~~~--~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d 157 (396)
T 3jtx_A 83 YDGLTVDADNEILP--VLGSREALFSF--VQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPD 157 (396)
T ss_dssp TTTCCCCTTTSEEE--ESSHHHHHHHH--HHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCC
T ss_pred cCCCCCCCCCeEEE--cCCcHHHHHHH--HHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccC
Confidence 7766 6788 9988 99999999998 44446786 79999999999999999999999999998 45567789
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH-H---Hh
Q 017967 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL-F---AT 291 (363)
Q Consensus 216 ~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~---~~ 291 (363)
++.+++++++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...+... + ..
T Consensus 158 ~~~l~~~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~ 232 (396)
T 3jtx_A 158 WRSISEEVWK---RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN--KPLGCLQAAAQLGR 232 (396)
T ss_dssp GGGSCHHHHH---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC--CCCCHHHHHHHTTC
T ss_pred HHHHHHhhcc---CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCchHHhhhhhccc
Confidence 9999999984 567788889999999999999999999999999999999999999988642 1112211 1 11
Q ss_pred cCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
..++++++.||||.|+++|+|+||+ +++ ++ +++.+.........+++.++|.++...|+.
T Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 292 (396)
T 3jtx_A 233 SRQKLLMFTSLSKRSNVPGLRSGFV--AGD-AE----LLKNFLLYRTYHGSAMSIPVQRASIAAWDD 292 (396)
T ss_dssp CCTTEEEEEESTTTSSCGGGCCEEE--EEC-HH----HHHHHHHHHHHHTCCCCHHHHHHHHHHHHC
T ss_pred ccCcEEEEeccccccCCcccceEEE--EeC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHhCC
Confidence 3578999999999999999999999 664 66 555555554455568899999999887754
No 25
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.8e-35 Score=285.05 Aligned_cols=279 Identities=15% Similarity=0.149 Sum_probs=201.2
Q ss_pred CCCCCCCchhhHHH---HHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHH
Q 017967 62 VTMAPPDPILGVSE---AFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (363)
Q Consensus 62 v~~~~~~~~~~~~~---~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (363)
+...++..+..+.. .++.++ .++|+|+.|.+. . ..++.+.+++.+.+......+|++..|..++|++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~g-~~~idl~~g~~~-~----~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 87 (412)
T 2x5d_A 14 IDRLPPYVFNITAELKMAARRRG-EDIIDLSMGNPD-G----PTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW 87 (412)
T ss_dssp -------CHHHHHHHHHHHHHTT-CCCEECSSCCCC-S----CCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred HhhcCchHHHHHHHHHHHHhhcC-CCEEecCCCCCC-C----CCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence 33334444544433 333443 378999999852 1 14577888777665432235798888999999999999
Q ss_pred HhcCCCCcccC-CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHH
Q 017967 139 LFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 217 (363)
Q Consensus 139 l~~~~~~~~~~-~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 217 (363)
+...++..+++ ++|++ |+||+++++++. ..++.+||+|+++.|+|..+...++..|++++.++++++.++.+|++
T Consensus 88 ~~~~~g~~~~~~~~v~~--t~g~~~a~~~~~--~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 163 (412)
T 2x5d_A 88 YRDRYDVQIDPESEAIV--TIGSKEGLAHLM--LATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELE 163 (412)
T ss_dssp HHHHHCCCCCTTTSEEE--ESCHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHH
T ss_pred HHHHhCCCCCCCcCEEE--cCChHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHH
Confidence 86655655667 69988 999999999984 34467999999999999999999999999999999854324457889
Q ss_pred HHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEE
Q 017967 218 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (363)
Q Consensus 218 ~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 297 (363)
.++++++. +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+....++++
T Consensus 164 ~l~~~i~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~i 238 (412)
T 2x5d_A 164 RAIRESIP---KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGW--KAPSIMQVPGAKDIAV 238 (412)
T ss_dssp HHHHTEES---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTGGGTEE
T ss_pred HHHHhccc---CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCChhhccCccCcEE
Confidence 99988762 345666799999999999999999999999999999999999999987532 1222222211246799
Q ss_pred EEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 298 ~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++.||||.+|++|+|+||+ +++ ++ +++.+.........+++.++|.++..+|+..++|
T Consensus 239 ~~~s~sK~~~~~G~r~G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 296 (412)
T 2x5d_A 239 EFFTLSKSYNMAGWRIGFM--VGN-PE----LVSALARIKSYHDYGTFTPLQVAAIAALEGDQQC 296 (412)
T ss_dssp EEEECC-CCSCTTSCCEEE--EEC-HH----HHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHH
T ss_pred EEecCccccCCcccceEEE--EcC-HH----HHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999 664 66 4555554444445688999999998888765444
No 26
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=5.7e-35 Score=280.24 Aligned_cols=273 Identities=17% Similarity=0.169 Sum_probs=210.4
Q ss_pred CCCchhhHHHHH---hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcC
Q 017967 66 PPDPILGVSEAF---KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA 142 (363)
Q Consensus 66 ~~~~~~~~~~~~---~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~ 142 (363)
+++++..+...+ ..+ .+++|+|+.|.+. . ..++.+.+++.+.+.... .+|++..|..++|+++++++...
T Consensus 11 ~~~~~~~~~~~~~~~~~~-g~~~i~l~~~~~~-~----~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~~~ 83 (388)
T 1j32_A 11 SPSMTLIIDAKAKAMKAE-GIDVCSFSAGEPD-F----NTPKHIVEAAKAALEQGK-TRYGPAAGEPRLREAIAQKLQRD 83 (388)
T ss_dssp CCCSSTTTHHHHHHHHTT-TCCCEECCCSSCS-S----CCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhc-CCCEEECCCCCCC-C----CCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHh
Confidence 344454444433 333 2479999999862 1 135677777776664433 67988889999999999999766
Q ss_pred CCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHH
Q 017967 143 DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 143 ~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
++..+++++|++ |.||++++.++. ..++.+||+|++++|+|..+...++..|++++.++.++++++.+|++.+++.
T Consensus 84 ~g~~~~~~~v~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 159 (388)
T 1j32_A 84 NGLCYGADNILV--TNGGKQSIFNLM--LAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQA 159 (388)
T ss_dssp HCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHH
T ss_pred cCCCCChhhEEE--cCCHHHHHHHHH--HHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHh
Confidence 666667889988 999999999984 4446799999999999999999999999999999985434678999999998
Q ss_pred HHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-cCCeEEEEEc
Q 017967 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQS 301 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S 301 (363)
+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. ..++..+.. ..++++++.|
T Consensus 160 l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s 234 (388)
T 1j32_A 160 ITP---KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQ--HLSIGAASPEAYERSVVCSG 234 (388)
T ss_dssp CCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHHHTEEEEEE
T ss_pred cCc---CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCC--CCCHHHccccccCCEEEEee
Confidence 863 4677788999999999999999999999999999999999999999875421 112211111 1247899999
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
|||.+|++|+|+||+ +++ ++ +++.+.........+++.++|.++...|+..++
T Consensus 235 ~sK~~~~~G~r~G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 287 (388)
T 1j32_A 235 FAKTYAMTGWRVGFL--AGP-VP----LVKAATKIQGHSTSNVCTFAQYGAIAAYENSQD 287 (388)
T ss_dssp STTTTTCTTTCCEEE--ECC-HH----HHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSH
T ss_pred chhccCCcccceEEE--EeC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcH
Confidence 999999999999999 665 66 555565555555668889999988777764443
No 27
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=8.2e-35 Score=280.52 Aligned_cols=259 Identities=16% Similarity=0.177 Sum_probs=206.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC-CcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt~ 162 (363)
..|||+.|.|. + ..+++.+.+++.+.+.......|.+..|..++++++++++...++..+++ ++|++ |+||++
T Consensus 40 ~~id~~~g~~~---~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~--~~g~~~ 113 (407)
T 3nra_A 40 RPVDFSHGDVD---A-HEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLII--TPGTQG 113 (407)
T ss_dssp CCEETTSCCTT---T-SCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEE--ESHHHH
T ss_pred ceeeecCcCCC---C-CCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCcHH
Confidence 47999999863 1 22456777777666543222468888999999999999987766666656 79988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc----CCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD----PKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~----~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
++.++ +..++.+||+|+++.|+|..+...++..|++++.++++. ++++++|++.+++.+++ +++++++++|
T Consensus 114 a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~p 188 (407)
T 3nra_A 114 ALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA---GARVFLFSNP 188 (407)
T ss_dssp HHHHH--HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT---TCCEEEEESS
T ss_pred HHHHH--HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh---CCcEEEEcCC
Confidence 99988 344467999999999999999999999999999999832 35688999999999984 4557777999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCccccccccccceEEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
|||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+. ...++++++.||||.+|++|+|+||+
T Consensus 189 ~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~- 265 (407)
T 3nra_A 189 NNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGA--SYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVA- 265 (407)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTC--CCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEE-
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEE-
Confidence 99999999999999999999999999999999999987642 122332221 23568999999999999999999999
Q ss_pred EeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 318 VVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++ ++ +++.+.........+++.++|.++..+|+..++|
T Consensus 266 -~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 304 (407)
T 3nra_A 266 -FGS-RA----IIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGW 304 (407)
T ss_dssp -EEC-HH----HHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTH
T ss_pred -EcC-HH----HHHHHHHHHhhhccCCChHHHHHHHHHHhccchH
Confidence 664 66 5566665555666688899999998888765544
No 28
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=4e-34 Score=274.29 Aligned_cols=257 Identities=11% Similarity=0.116 Sum_probs=202.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++.|+|+.|.+. . ..++.+.+++.+...... .+|.+..|..++|+++++++...++..++++ +|++ |.|++
T Consensus 30 ~~~i~l~~~~~~-~----~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~--~~g~~ 101 (386)
T 1u08_A 30 HQAINLSQGFPD-F----DGPRYLQERLAHHVAQGA-NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITV--TAGAT 101 (386)
T ss_dssp TTCEECCCSSCS-S----CCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEE--ESSHH
T ss_pred CCeEEecCCCCC-C----CCCHHHHHHHHHHHHhhc-cCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--cCChH
Confidence 378999999862 1 135677888777664433 6798888999999999999866555556778 9988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++.++. ..++.+||+|+++.|+|..+...++..|++++.+++++ +++++|++.+++.++ ++++++++++||||
T Consensus 102 ~a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~---~~~~~v~l~~p~np 175 (386)
T 1u08_A 102 EALYAAI--TALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQP-PHFRVDWQEFAALLS---ERTRLVILNTPHNP 175 (386)
T ss_dssp HHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCT-TTCCCCHHHHHHHCC---TTEEEEEEESSCTT
T ss_pred HHHHHHH--HHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCc-ccCcCCHHHHHHhhc---ccCEEEEEeCCCCC
Confidence 9999884 33467999999999999999999999999999999853 257899999999885 35677788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|+++|+||+|.++.+++.. ..++..+....++++++.||||.+|++|+|+||+ +++
T Consensus 176 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~~ 251 (386)
T 1u08_A 176 SATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQG--HASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYC--VAP 251 (386)
T ss_dssp TCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSC--CCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEE--ECC
T ss_pred CCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCC--CcChhcccCccCcEEEEecchhhcCCcccceEEE--EcC
Confidence 999999999999999999999999999999999875421 1122212112468999999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++ +++.+.........+++.+.|.++..+|+..++|
T Consensus 252 -~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 287 (386)
T 1u08_A 252 -AP----ISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEH 287 (386)
T ss_dssp -HH----HHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHH
T ss_pred -HH----HHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHH
Confidence 66 4555554443344577888999888877654433
No 29
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.5e-34 Score=279.76 Aligned_cols=271 Identities=14% Similarity=0.146 Sum_probs=204.8
Q ss_pred CCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccc-c-HHH---------HHHHHHHHccCCCCCCCCCcchHH
Q 017967 62 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYV-L-DVV---------KKAENLMLERGENKEYLPIEGLAA 130 (363)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~-~-~~v---------~~a~~~~~~~~~~~~Y~~~~G~~~ 130 (363)
+....++++..+........ ++.|+|+.|.|. ....|.. . ..+ .+.... ..+|.+..|.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~~G~p~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~ 82 (425)
T 2r2n_A 11 SAARNPSPIRTMTDILSRGP-KSMISLAGGLPN-PNMFPFKTAVITVENGKTIQFGEEMMKR------ALQYSPSAGIPE 82 (425)
T ss_dssp HHTCCCCSGGGHHHHHHHSC-TTCEECCCCCCC-GGGCSEEEEEEEETTSCCEEECHHHHHH------HTSCCCTTCCHH
T ss_pred HhcCCCchHHHHHHHhhcCC-CCeEEcCCcCCC-chhCCHHHHHHHHhhcccccccccchhh------hcCCCCCCCCHH
Confidence 34455667777776665432 478999999973 2222210 0 000 111111 157999999999
Q ss_pred HHHHHHHHHhcCCCCccc-------CCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 131 FNKVTAELLFGADNSVLK-------EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 131 lr~aia~~l~~~~~~~~~-------~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
||+++++++.+.++...+ +++|++ |.|+++++.++. ..++.+||+|++++|+|..+...++..|++++.
T Consensus 83 lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~--t~G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 158 (425)
T 2r2n_A 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCV--TSGSQQGLCKVF--EMIINPGDNVLLDEPAYSGTLQSLHPLGCNIIN 158 (425)
T ss_dssp HHHHHHHHHHHHHCCTTTTSCGGGTCEEEEE--ESSHHHHHHHHH--HHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHhcCCCCccccccCCcCcEEE--eCcHHHHHHHHH--HHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEE
Confidence 999999998766666553 368988 999999999984 444679999999999999999999999999999
Q ss_pred EecccCCCCCCCHHHHHHHHHcC----------CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 204 YRYYDPKTVGLDFEGMIADIKAA----------PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~----------~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
+++++ .++|++.|++.++.. ++...++++++||||||.+++.+++++|+++|+++|++||+||+|.+
T Consensus 159 v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~ 235 (425)
T 2r2n_A 159 VASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYF 235 (425)
T ss_dssp ECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGG
T ss_pred eCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 99853 369999999998732 12334445689999999999999999999999999999999999999
Q ss_pred CcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHh
Q 017967 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQL 353 (363)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~ 353 (363)
+.+++. ...++..+ +..+++++++||||.|+ +|+|+||+ +++ ++ +++.+.........+++.++|.++.
T Consensus 236 ~~~~g~--~~~~~~~~-~~~~~~i~~~s~SK~~~-~GlRiG~~--~~~-~~----l~~~l~~~~~~~~~~~~~~~q~a~~ 304 (425)
T 2r2n_A 236 LQFNKF--RVPTFLSM-DVDGRVIRADSFSKIIS-SGLRIGFL--TGP-KP----LIERVILHIQVSTLHPSTFNQLMIS 304 (425)
T ss_dssp GBSSSS--CCCCTGGG-CTTSCEEEEEESTTTTC-STTCCEEE--EEE-HH----HHHHHHHHHHTTTCSSCHHHHHHHH
T ss_pred ccCCCC--CCCCcccc-CCCCCEEEEccchhhcc-CccceEEE--ecC-HH----HHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 887542 12222222 34568999999999999 99999999 776 55 5566665555556789999999998
Q ss_pred ccccc
Q 017967 354 SSMNG 358 (363)
Q Consensus 354 ~~l~~ 358 (363)
.+|+.
T Consensus 305 ~~l~~ 309 (425)
T 2r2n_A 305 QLLHE 309 (425)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88765
No 30
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=4.7e-34 Score=274.79 Aligned_cols=256 Identities=16% Similarity=0.222 Sum_probs=204.4
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCC---CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
+++|+|+.|.+. ..+++.+.+++.+.+.... ..+|++..|..++|+++++++...++..+++++|++ |+|
T Consensus 35 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~--~~g 107 (398)
T 3ele_A 35 ENVYDFSIGNPS-----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYM--TMG 107 (398)
T ss_dssp GGCEECCSCCCC-----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESS
T ss_pred CCeEEeecCCCC-----CCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEE--ccC
Confidence 478999999652 1245677777776654321 267988999999999999999877777778899988 999
Q ss_pred hhHHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 160 GTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
+++++.++ +..++.+| |+|+++.|+|..+...++..|++++.+|+++ +++++|++.++++++ ++++++++++|
T Consensus 108 ~~~al~~~--~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~---~~~~~v~~~~p 181 (398)
T 3ele_A 108 AAASLSIC--FRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQIDFDALEERIN---AHTRGVIINSP 181 (398)
T ss_dssp HHHHHHHH--HHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSSCCHHHHHHTCC---TTEEEEEECSS
T ss_pred HHHHHHHH--HHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHhC---cCCCEEEEcCC
Confidence 99999998 44447799 9999999999999999999999999999853 468999999999886 35778888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh------cCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc
Q 017967 239 HNPTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~------~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R 312 (363)
|||||.+++.+++++|+++|++ +|+++|+||+|.++.+++.. ... ..+..+++++++||||.+|++|+|
T Consensus 182 ~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~--~~~---~~~~~~~~i~~~s~sK~~~~~G~r 256 (398)
T 3ele_A 182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIK--VPF---VTKYYDNTLVCYSYSKSLSLPGER 256 (398)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCC--CCC---GGGTCSSEEEEEESTTTSSCTTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCC--cCC---hHhhcCCeEEEEehhhcCCCccce
Confidence 9999999999999999999999 99999999999999886421 111 123457899999999999999999
Q ss_pred ceEEEEeeCChhHHH--HHHHHHHhhhcc-ccCCCchHHHHHHhcccccc
Q 017967 313 IGAMNVVCSSSDLAA--RVKSQLKRLARP-MYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 313 vG~i~~v~~~~~~~~--~~~~~l~~~~~~-~~~~~s~~~q~~~~~~l~~~ 359 (363)
+||+ +++++ .++ .+.+.+...... ...+++.+.|.++...++..
T Consensus 257 ~G~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 303 (398)
T 3ele_A 257 IGYV--LVPDE-VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGAT 303 (398)
T ss_dssp CEEE--ECCTT-STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCC
T ss_pred eEEE--EEcch-hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCH
Confidence 9999 77644 211 234444433322 35688889999998887654
No 31
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-33 Score=271.56 Aligned_cols=272 Identities=17% Similarity=0.154 Sum_probs=211.9
Q ss_pred CCCCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhc
Q 017967 64 MAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (363)
Q Consensus 64 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~ 141 (363)
..+++++.++...++.. ..++.|+|+.|.+. ...++.+.+++.+.+.... .+|.+..|..++|+++++++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~ 93 (389)
T 1o4s_A 20 EIPISKTMELDAKAKALIKKGEDVINLTAGEPD-----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRIGE 93 (389)
T ss_dssp HSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCS-----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHHHH
T ss_pred hcCccHHHHHHHHHHHHHhcCCCEEEccCCCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHH
Confidence 34455566665544322 23478999999862 1135778888777664433 5788888999999999999876
Q ss_pred CCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
.++..+++++|++ |+||++++.++. ..++.+||+|++++|+|..+...++..|++++.+|.++++++.+|++.+++
T Consensus 94 ~~g~~~~~~~v~~--~~g~t~al~~~~--~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 169 (389)
T 1o4s_A 94 RYKKDISPDQVVV--TNGAKQALFNAF--MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG 169 (389)
T ss_dssp HHTCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHH
T ss_pred HhCCCCCHHHEEE--ecCHHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHH
Confidence 5566667889988 999999999984 344679999999999999999999999999999998543467899999999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++..+....+++++++|
T Consensus 170 ~l~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~---~~~~~~~~~~~~~~i~~~s 243 (389)
T 1o4s_A 170 LLVG---KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE---FTSILDVSEGFDRIVYING 243 (389)
T ss_dssp TCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC---CCCHHHHCSSSTTEEEEEE
T ss_pred hccc---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC---CCCHhhcCCCCCcEEEEee
Confidence 8863 466778899999999999999999999999999999999999999987531 2233333222468999999
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|||.+|++|+|+||+ +++ ++ +++.+.........+++.++|.++..+|+.
T Consensus 244 ~sK~~~~~G~r~G~l--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 293 (389)
T 1o4s_A 244 FSKSHSMTGWRVGYL--ISS-EK----VATAVSKIQSHTTSCINTVAQYAALKALEV 293 (389)
T ss_dssp STTTTTCGGGCCEEE--ECC-HH----HHHHHHHHHHHHTCSCCHHHHHHHHHHTTC
T ss_pred chhhcCCcccceEEE--EeC-HH----HHHHHHHHhhhcccCCCHHHHHHHHHHHhc
Confidence 999999999999999 665 66 455555554444567889999988877754
No 32
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=5.9e-34 Score=271.90 Aligned_cols=266 Identities=13% Similarity=0.058 Sum_probs=209.3
Q ss_pred CCCchhhHHHHHhcCC-CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCC
Q 017967 66 PPDPILGVSEAFKADT-DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (363)
+++++.++...++... +.++|+|+.|.+. ...++.+.+++.+... ...+|++..|..++|+++++++...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~-----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~g 77 (376)
T 3ezs_A 5 EPYPFERLRALLKEITPKKRGLDLGIGEPQ-----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRFK 77 (376)
T ss_dssp CCCHHHHHHHHHTTCCCSSCCCBCSSCCCC-----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHHS
T ss_pred CcchHHHHHHHHHhhhccCCEEEeCCCCCC-----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4556777776665422 2389999999852 1145778888766552 236798888999999999999977666
Q ss_pred CcccCCcEEEEeccchhHHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHH
Q 017967 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
..+++++|++ |+|++++++++ +..++.+ ||+|+++.|+|..+...++..|++++.++++++. ++++ .+++.
T Consensus 78 ~~~~~~~i~~--t~g~~~al~~~--~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~-~l~~~ 150 (376)
T 3ezs_A 78 IELKENELIS--TLGSREVLFNF--PSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKEN--DFTP-SLNEK 150 (376)
T ss_dssp CCCCGGGEEE--ESSSHHHHHHH--HHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGG--TSCC-CCCHH
T ss_pred CCCCHHHEEE--CcCcHHHHHHH--HHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCC--Ccch-hHHhh
Confidence 6667899988 99999999988 4445678 9999999999999999999999999999985432 3444 66666
Q ss_pred HHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-----cCCeEE
Q 017967 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-----RGMELL 297 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-----~~~~vi 297 (363)
+.+ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..+.....+ ..++++
T Consensus 151 ~~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 224 (376)
T 3ezs_A 151 ELQ---EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTP---PPSLLEACMLAGNEAFKNVL 224 (376)
T ss_dssp HHH---HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC---CCCHHHHHHHTTCTTCTTEE
T ss_pred hcc---CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC---CCCHHHccccccccccCcEE
Confidence 663 355777799999999999999999999999999999999999999988642 223333333 568899
Q ss_pred EEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 298 ~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++.||||.+|++|+|+||+ +++ ++ +++.+........++++.++|.++...|+.
T Consensus 225 ~~~s~sK~~g~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 278 (376)
T 3ezs_A 225 VIHSLSKRSSAPGLRSGFI--AGD-SR----LLEKYKAFRAYLGYTSANAIQKASEAAWLD 278 (376)
T ss_dssp EEEESTTTTTCGGGCCEEE--EEC-HH----HHHHHHHHHTTTCCCCCHHHHHHHHHHHHC
T ss_pred EEecchhccCCccceeEEE--eeC-HH----HHHHHHHHHhhhcCCCChHHHHHHHHHHhC
Confidence 9999999999999999999 664 66 566666665555678899999998887765
No 33
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.1e-34 Score=282.44 Aligned_cols=261 Identities=13% Similarity=0.081 Sum_probs=209.5
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+++|+|+.|.+. ..+++.+.+++.+.+......+|.+..|..++|+++++++...++..+++++|++ |+|++
T Consensus 43 g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~--t~g~t 115 (437)
T 3g0t_A 43 GTKFCRMEMGVPG-----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVP--TVGSM 115 (437)
T ss_dssp TCCCEECCCCSCC-----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESHHH
T ss_pred CCCEEeccCcCCC-----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEE--eCCHH
Confidence 4589999999862 2246778887777664333267988889999999999999877777778899988 99999
Q ss_pred HHHHHHHHHHHHh--CCCC--EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 162 GSLRLAAALIERY--FPGA--KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 162 ~al~l~~~l~~~~--~~gd--~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
++++++ +..++ .+|| +|+++.|+|..+...++..|++++.++++ ++++.+|++.++++++. .+++++++++
T Consensus 116 ~al~~~--~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~--~~~~~v~l~~ 190 (437)
T 3g0t_A 116 QGCFVS--FLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQT--GQFCSIIYSN 190 (437)
T ss_dssp HHHHHH--HHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTT--TCCCEEEEES
T ss_pred HHHHHH--HHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhc--CCceEEEEeC
Confidence 999998 44445 8999 99999999999999999999999999986 45677899999999942 3456777799
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch---hHH-HHHHhcCCeEEEEEcCccccccccccc
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA---SSV-RLFATRGMELLVAQSYSKNLGLYAERI 313 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~---~~~-~~~~~~~~~vi~~~S~SK~~~l~G~Rv 313 (363)
||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ... +++ ..+.+..++++++.||||.+|++|+|+
T Consensus 191 p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 269 (437)
T 3g0t_A 191 PNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD-YSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRI 269 (437)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC-CCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC-cCcccccchhhccCCCCCcEEEEEcCccCCCCcccee
Confidence 999999999999999999999999999999999999887631 111 000 222233688999999999999999999
Q ss_pred eEEEEeeCChhHHHHHHH-H-----------------HHhhhccccCCCchHHHHHHhccccccccC
Q 017967 314 GAMNVVCSSSDLAARVKS-Q-----------------LKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 314 G~i~~v~~~~~~~~~~~~-~-----------------l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
||+ +++ ++ +++ . +.........+++.++|.++..+|+..+.|
T Consensus 270 G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 329 (437)
T 3g0t_A 270 GVL--MIS-GK----LYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDG 329 (437)
T ss_dssp EEE--EEC-HH----HHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTT
T ss_pred EEE--EEC-HH----HhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhH
Confidence 999 766 55 444 4 444444456689999999999988876655
No 34
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=5.9e-34 Score=275.79 Aligned_cols=278 Identities=17% Similarity=0.178 Sum_probs=210.2
Q ss_pred chhhHHHHHhcCCC-CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhc------
Q 017967 69 PILGVSEAFKADTD-EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG------ 141 (363)
Q Consensus 69 ~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~------ 141 (363)
++..+...+....+ +++|+|+.|.|... ....+++.+.+++.+.+......+|++..|..++|+++|+++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~ 96 (416)
T 1bw0_A 18 PIRTVSDNAKPSPSPKPIIKLSVGDPTLD-KNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKE 96 (416)
T ss_dssp HHHHHHHTCCCCCSCSCCEECCCCCTTTT-SCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCST
T ss_pred HHHHHHHHHHHhhcCCCeEEecCcCCCcc-cCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccc
Confidence 35444444433222 37899999986321 12345678888877766543336798888999999999999872
Q ss_pred CCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
..+..+++++|++ |+|++++++++. ..++.+||+|+++.|+|..+...++..|++++.++++++.++.+|++.+++
T Consensus 97 ~~~~~~~~~~v~~--~~g~~~al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 172 (416)
T 1bw0_A 97 ELKSTIVKDNVVL--CSGGSHGILMAI--TAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRR 172 (416)
T ss_dssp TTGGGCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHH
T ss_pred cCCCCCCcceEEE--eCChHHHHHHHH--HHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHH
Confidence 3566677899988 999999999884 344679999999999999999999999999999998644457799999999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCC--chhHHHHHHhcCCeEEEE
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN--DASSVRLFATRGMELLVA 299 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~~~~~~~vi~~ 299 (363)
.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++... ...++..+ +...+++++
T Consensus 173 ~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~~~~~~i~~ 248 (416)
T 1bw0_A 173 LKDD---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF-ETTVPRVIL 248 (416)
T ss_dssp HCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS-CCSCCEEEE
T ss_pred Hhcc---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHc-cCCCcEEEE
Confidence 8863 46678889999999999999999999999999999999999999988754200 11122111 233468999
Q ss_pred EcCccccccccccceEEEEeeCCh-hHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 300 QSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 300 ~S~SK~~~l~G~RvG~i~~v~~~~-~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+||||.|+++|+|+||+ +++++ +.++.+...++.... ...+++.++|.++..+|+.
T Consensus 249 ~s~sK~~~~~Glr~G~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~ 305 (416)
T 1bw0_A 249 GGTAKNLVVPGWRLGWL--LYVDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLN 305 (416)
T ss_dssp EESTTTTSCGGGCCEEE--EEECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHS
T ss_pred ecchhhCCCCCceEEEE--EeeCchhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHhc
Confidence 99999999999999999 77655 444445544443321 2347889999999887763
No 35
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-34 Score=275.28 Aligned_cols=255 Identities=15% Similarity=0.074 Sum_probs=201.1
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
.++|+|+.|.+. . + .++.+.+++.+.+......+|++..|..++|+++++++...++..++++ +|++ |+|++
T Consensus 25 ~~~idl~~~~~~-~-~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~--~~g~~ 97 (376)
T 2dou_A 25 VGLIDLSIGSTD-L-P---PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALA--LIGSQ 97 (376)
T ss_dssp CCCEECSSCCCC-C-C---CCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEE--ESSHH
T ss_pred CCEEeccCCCCC-C-C---CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE--cCCcH
Confidence 478999999862 1 1 3567888877766432236787767999999999999866556556666 9988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++++++. ..++.+||+|+++.|+|..+...++..|++++.+|+ ++++.+|++.+++.++. +++++++++||||
T Consensus 98 ~a~~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~---~~~~v~l~~p~np 170 (376)
T 2dou_A 98 EGLAHLL--LALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWR---EAKVLLLNYPNNP 170 (376)
T ss_dssp HHHHHHH--HHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHH---HEEEEEECSSCTT
T ss_pred HHHHHHH--HHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhcc---CceEEEECCCCCC
Confidence 9999884 444679999999999999999999999999999998 44567899999998863 4667888899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..+...+.+..+++++++||||.+|++|+|+||+ +++
T Consensus 171 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~~ 245 (376)
T 2dou_A 171 TGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE---APSPLALPGAKERVVELFSLSKSYNLAGFRLGFA--LGS 245 (376)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC---CCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEE--EEC
T ss_pred cCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCcEEEEecchhhcCChhheeEEE--ecC
Confidence 99999999999999999999999999999999987532 1122112233467899999999999999999999 665
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
++ +++.+.........+++.++|.++...|+..++
T Consensus 246 -~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 280 (376)
T 2dou_A 246 -EE----ALARLERVKGVIDFNQYAGVLRMGVEALKTPKE 280 (376)
T ss_dssp -HH----HHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHH
T ss_pred -HH----HHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHH
Confidence 66 455555544444557889999999888776333
No 36
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-34 Score=280.55 Aligned_cols=271 Identities=16% Similarity=0.104 Sum_probs=203.4
Q ss_pred CchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcc
Q 017967 68 DPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVL 147 (363)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~ 147 (363)
..+..+..........++|+|+.|.+. . + .++.+.+++.+.+......+|++..|..++|+++++++...++..+
T Consensus 32 ~~~~~~~~~~~~~~g~~~idl~~g~~~-~-~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~ 106 (404)
T 2o1b_A 32 SYFGKTMGRKIEHGPLPLINMAVGIPD-G-P---TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTL 106 (404)
T ss_dssp CTTC-------CCCSSCCEECCCCSCS-S-C---CCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHhcCCCCEEecCCcCCC-C-C---CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 334444433332222368999999862 1 1 3567777777665322125687778999999999999866556556
Q ss_pred cC-CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC
Q 017967 148 KE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 148 ~~-~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (363)
++ ++|++ |.|++++++++. ..++.+||+|+++.|+|..+...++..|.+++.+++++ +++.+|++.+++.++.
T Consensus 107 ~~~~~v~~--t~G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~- 180 (404)
T 2o1b_A 107 DKEDEVCI--LYGTKNGLVAVP--TCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIID- 180 (404)
T ss_dssp CTTTSEEE--ESSHHHHHHHHH--HHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHH-
T ss_pred CCcccEEE--cCCcHHHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhcc-
Confidence 65 79988 999999999884 44467999999999999999999999999999999853 4566899999998863
Q ss_pred CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++..+....++++++.||||.|
T Consensus 181 --~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~~~~~~i~~~s~sK~~ 255 (404)
T 2o1b_A 181 --KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK---NPSILASENGKDVAIEIYSLSKGY 255 (404)
T ss_dssp --HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC---CCCGGGSTTHHHHEEEEEESTTTT
T ss_pred --CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCCEEEEEecchhc
Confidence 466777899999999999999999999999999999999999999987531 112211111225789999999999
Q ss_pred ccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
|++|+|+||+ +++ ++ +++.+.........+++.++|.++...|+..++
T Consensus 256 g~~G~r~G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 303 (404)
T 2o1b_A 256 NMSGFRVGFA--VGN-KD----MIQALKKYQTHTNAGMFGALQDAAIYALNHYDD 303 (404)
T ss_dssp TCGGGCCEEE--EEC-HH----HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHH
T ss_pred cCchhheEeE--ecC-HH----HHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHH
Confidence 9999999999 664 66 455555554445568899999999888765333
No 37
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=9.9e-34 Score=273.63 Aligned_cols=274 Identities=19% Similarity=0.164 Sum_probs=207.7
Q ss_pred CCCCCCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhc
Q 017967 62 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (363)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~ 141 (363)
+.......+. ..+.+..++ ++.|+|+.|.+.... ...++.+.+++.+.+.... ..|++..|..++|+++++++..
T Consensus 19 ~~~~~~~~~~-~~~~~~~~g-~~~i~l~~~~~~~~~--~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~ 93 (406)
T 1xi9_A 19 VEYAIRDVVL-PARELEKKG-IKVIRLNIGDPVKFD--FQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKR 93 (406)
T ss_dssp CCC--------CHHHHHHTT-CCCEECCCCCGGGTT--CCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHH
T ss_pred CChhHHHHHH-HHHHHHHcC-CCEEEecCCCCCcCC--CCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHH
Confidence 3333333444 445555543 479999999862101 1135677777766664432 5798888999999999999977
Q ss_pred CCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
.++..+++++|++ |+||++++.++. ..++.+||+|++++|+|..+...++..|++++.+++++++++.+|++.+++
T Consensus 94 ~~g~~~~~~~v~~--t~g~~~al~~~~--~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 169 (406)
T 1xi9_A 94 KNGVDITPDDVRV--TAAVTEALQLIF--GALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRK 169 (406)
T ss_dssp HHCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHH
T ss_pred hcCCCCCHHHEEE--cCChHHHHHHHH--HHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHH
Confidence 6666677899988 999999999984 344679999999999999999999999999999998643456789999999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe-EEEEE
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQ 300 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~ 300 (363)
.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++. ...++..+ + .++ +++++
T Consensus 170 ~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~-~-~~~~~i~~~ 241 (406)
T 1xi9_A 170 KITD---RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG---EHISPGSL-T-KDVPVIVMN 241 (406)
T ss_dssp HCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS---CCCCHHHH-C-SSSCEEEEE
T ss_pred hhCc---CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHc-C-CCceEEEEe
Confidence 8863 46677789999999999999999999999999999999999999998742 12234444 3 567 89999
Q ss_pred cCccccccccccceEEEEe--eCCh----hHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 301 SYSKNLGLYAERIGAMNVV--CSSS----DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v--~~~~----~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
||||.+|++|+|+||+ + ++ + + +++.+....... .+++.++|.++..+|+..+
T Consensus 242 s~sK~~~~~G~r~G~~--~~~~~-~~~~~~----l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~ 299 (406)
T 1xi9_A 242 GLSKVYFATGWRLGYM--YFVDP-ENKLSE----VREAIDRLARIR-LCPNTPAQFAAIAGLTGPM 299 (406)
T ss_dssp ESTTTTCCGGGCCEEE--EEECT-TCTTHH----HHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCC
T ss_pred ccccccCCCccEEEEE--EEecC-chhHHH----HHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCc
Confidence 9999999999999999 5 55 5 5 455555444333 5788899999888775333
No 38
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.5e-34 Score=276.47 Aligned_cols=257 Identities=15% Similarity=0.140 Sum_probs=200.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (363)
++.|+|+.|.+. . ..++.+.+++.+.+... ...|.+..|..++|+++++++...++..++++ +|++ |.||+
T Consensus 25 ~~~i~l~~~~~~-~----~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~--t~g~~ 96 (411)
T 2o0r_A 25 IGAVNLGQGFPD-E----DGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLV--TVGAT 96 (411)
T ss_dssp TTCEESSCSSCS-S----CCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEE--EEHHH
T ss_pred CCeeeccCcCCC-C----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEE--eCCHH
Confidence 368999999862 1 13567777777766443 36798888999999999999876556556677 9988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccC-CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+++.++. ..++.+||+|+++.|+|..+...++..|++++.++++++ .++.+|++.|++.++ ++++++++++|||
T Consensus 97 ~al~~~~--~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~~~n 171 (411)
T 2o0r_A 97 EAIAAAV--LGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT---PRTRALIINSPHN 171 (411)
T ss_dssp HHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC---TTEEEEEEESSCT
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc---cCceEEEEeCCCC
Confidence 9999884 444679999999999999999999999999999998532 246699999999886 3467778899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+....+.++++.||||.+|++|+|+||+ ++
T Consensus 172 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~ 247 (411)
T 2o0r_A 172 PTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA--RHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWA--CG 247 (411)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEE--EC
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcChhhccCCCCCEEEEeechhhcCCccceEEEE--ee
Confidence 999999999999999999999999999999999987532 11222222112467999999999999999999999 66
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccccc
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 361 (363)
+ ++ +++.+........++.+.+.|.++...|+..++
T Consensus 248 ~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 283 (411)
T 2o0r_A 248 P-AE----LIAGVRAAKQYLSYVGGAPFQPAVALALDTEDA 283 (411)
T ss_dssp C-HH----HHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHH
T ss_pred C-HH----HHHHHHHHHhhccCCCChHHHHHHHHHHhCChH
Confidence 4 76 444454444333456778888888777764333
No 39
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=7.1e-34 Score=271.25 Aligned_cols=258 Identities=13% Similarity=0.090 Sum_probs=207.0
Q ss_pred HHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 76 AFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 76 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
.++.++ +++|+|+.|.+. ...++.+.+++.+.+.... .+|++ .| .++|+++++++...++..+++++|++
T Consensus 17 ~~d~~g-~~~idl~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~- 86 (377)
T 3fdb_A 17 KWTRYG-QGVLPLWVAESD-----FSTCPAVLQAITDAVQREA-FGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFP- 86 (377)
T ss_dssp HHHSSC-TTSEECCSSCCC-----SCCCHHHHHHHHHHHHTTC-CSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEE-
T ss_pred eeeccC-CCeeeecccCCC-----CCCCHHHHHHHHHHHHcCC-CCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEE-
Confidence 344444 389999999752 2246778888777665433 67988 77 89999999999877777777899988
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEE
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i 235 (363)
|+||+++++++ +..++.+||+|+++.|+|..+...++..|++++.+|+++ + +|++.+++.+++ +++++++
T Consensus 87 -t~g~~~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~--~d~~~l~~~l~~---~~~~v~i 156 (377)
T 3fdb_A 87 -IPDVVRGLYIA--IDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATG--G--INLHDVEKGFQA---GARSILL 156 (377)
T ss_dssp -ESCHHHHHHHH--HHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTT--S--CCHHHHHHHHHT---TCCEEEE
T ss_pred -eCChHHHHHHH--HHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCC--C--CCHHHHHHHhcc---CCCEEEE
Confidence 99999999988 444567999999999999999999999999999999853 2 999999999984 3567888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCC-CCCchhHHHHHHhcCCeEEEEEcCccccccccccce
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS-LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ . ...++..+ +..++++++.||||.+|++|+|+|
T Consensus 157 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G 233 (377)
T 3fdb_A 157 CNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQH--TVAAGVSD-TAASVCITITAPSKAWNIAGLKCA 233 (377)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCC--CCGGGSCH-HHHHHEEEEECSTTTTTCGGGCCE
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCC--CcccHHHc-cCCCcEEEEEeChHhccCcchhhe
Confidence 9999999999999999999999999999999999999988764 1 12222222 224688999999999999999999
Q ss_pred EEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 315 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 315 ~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
|+ ++++++ +++.+.........+++.++|.++...|+..++|
T Consensus 234 ~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 275 (377)
T 3fdb_A 234 QI--IFSNPS----DAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDF 275 (377)
T ss_dssp EE--ECCSHH----HHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHH
T ss_pred EE--EeCCHH----HHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHH
Confidence 98 776777 5566665555555689999999988877664443
No 40
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.4e-33 Score=272.76 Aligned_cols=254 Identities=14% Similarity=0.069 Sum_probs=201.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (363)
+.|+|+.|.+. . ..++.+.+++.+.+... ...+|.+..|..++|+++++++...++..++++ +|++ |.||
T Consensus 38 ~~i~l~~~~~~-~----~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~--~~g~ 110 (429)
T 1yiz_A 38 KPLNLGQGFPD-Y----HAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLV--TVGA 110 (429)
T ss_dssp CCEECCSSSCS-S----CCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEE--ESHH
T ss_pred CEEEecCCCCC-C----CCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEE--ecCh
Confidence 78999999862 1 13567788877766431 126788888999999999999866555556678 9988 9999
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCC--------CCCCCHHHHHHHHHcCCCCcEE
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~--------~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
+++++++. ..++.+||+|+++.|+|..+...++..|++++.+|++.++ ++++|++.|++.++ +++++
T Consensus 111 ~~a~~~~~--~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~ 185 (429)
T 1yiz_A 111 YEALYATI--QGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN---EKTKM 185 (429)
T ss_dssp HHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC---TTEEE
T ss_pred HHHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc---cCceE
Confidence 99999884 3446799999999999999999999999999999986432 56899999999885 35677
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R 312 (363)
+++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+.+..++++++.||||.+|++|+|
T Consensus 186 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r 263 (429)
T 1yiz_A 186 IIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPF--EHIRICTLPGMWERTITIGSAGKTFSLTGWK 263 (429)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTS--CCCCGGGSTTTGGGEEEEEEHHHHHTCGGGC
T ss_pred EEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCC--CCcChhhccCCcCceEEEecchhccCCCCcc
Confidence 77899999999999999999999999999999999999999987542 1122222212346899999999999999999
Q ss_pred ceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 313 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 313 vG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+||+ +++ ++ +++.+........++++.+.|.++..+|+.
T Consensus 264 ~G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 302 (429)
T 1yiz_A 264 IGWA--YGP-EA----LLKNLQMVHQNCVYTCATPIQEAIAVGFET 302 (429)
T ss_dssp CEEE--ESC-HH----HHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred eEEE--EeC-HH----HHHHHHHHHhhcccCCChHHHHHHHHHHhc
Confidence 9999 665 66 455555544445567889999988888776
No 41
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=5.7e-34 Score=277.34 Aligned_cols=260 Identities=18% Similarity=0.209 Sum_probs=198.8
Q ss_pred CCcEEeecccc-CCCCCCccccHHH--HHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCc---EEEEe
Q 017967 83 EKKLNLGVGAY-RTEELQPYVLDVV--KKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR---VATVQ 156 (363)
Q Consensus 83 ~~~i~l~~g~~-~~~~~~~~~~~~v--~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~---i~~~~ 156 (363)
+++|||+.|.| .. +. ++.+ .+++.+.+......+|++..|..++|+++|+++...+ ..+++++ |++
T Consensus 47 ~~~i~l~~g~~~~~--~~---~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~-- 118 (430)
T 2x5f_A 47 STTYNATIGMATNK--DG---KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIV-- 118 (430)
T ss_dssp TCSEECCCSSCEET--TE---ECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEE--
T ss_pred CCcEEeeeeeccCC--CC---chhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEE--
Confidence 47999999986 31 11 2222 3333222222123679888899999999999986553 5556788 888
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i 235 (363)
|.|++++++++. ..++.+||+|+++.|+|..+...++. .|++++.++++++ ++++|++.+++.+++.+.+++++++
T Consensus 119 t~g~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~~v~i 195 (430)
T 2x5f_A 119 TNALTHGLSLVG--DLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDK-DGHYTTDSLVEALQSYNKDKVIMIL 195 (430)
T ss_dssp ESHHHHHHHHHH--HHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCT-TSCBCSHHHHHHHHHCCSSEEEEEE
T ss_pred cCCchHHHHHHH--HHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCc-cCCcCHHHHHHHHHhcCCCCEEEEE
Confidence 999999999984 44467999999999999999999999 9999999998543 3789999999999854446778888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHh-----cCCeEEEecCCCCCcCCCCCCchhHHH-HHHhcCCe---EEEEEcCcccc
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASSVR-LFATRGME---LLVAQSYSKNL 306 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~~~-----~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~~---vi~~~S~SK~~ 306 (363)
++||||||.+++.+++++|+++|++ +|+++|+||+|.++.+++. ...++. .+....++ +++++||||.|
T Consensus 196 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 273 (430)
T 2x5f_A 196 NYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV--YTQSLFTALTNLHSNAILPIRLDGATKEF 273 (430)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS--CCSCHHHHHHTTCCTTEEEEEEEEHHHHT
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc--cchHHHHHHhhccCCcceEEEEEecccCC
Confidence 9999999999999999999999999 9999999999999987642 122333 34333567 99999999999
Q ss_pred ccccccceEEEEee--CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 307 GLYAERIGAMNVVC--SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 307 ~l~G~RvG~i~~v~--~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|++|+|+||+ ++ ++++.++++........+..+.+++.++|.++..+|+
T Consensus 274 ~~~G~riG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 274 FAWGFRVGFM--TFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp TCGGGCCEEE--EEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred CCCCCCeEEE--EEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 9999999999 66 3577444443322211122567899999999988876
No 42
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=3e-33 Score=272.12 Aligned_cols=256 Identities=14% Similarity=0.157 Sum_probs=198.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHc--------c--CCCCCCCCCcchHHHHHHHHHHHhcCCCCc--ccCCc
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE--------R--GENKEYLPIEGLAAFNKVTAELLFGADNSV--LKEQR 151 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--------~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~--~~~~~ 151 (363)
+.|+|+.+++ ++.++.+.+++..... . .....|++..|..+||+++|+++...++.. +++++
T Consensus 37 ~~i~l~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 37 GVIQMGLAEN------QLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp SBEECSSCCC------CSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred ceeeeccccc------hhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 6889986653 4445677777664321 0 012568888899999999999997655544 66889
Q ss_pred EEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEEecccCCCCCCCHHHHHHHHHc---CC
Q 017967 152 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA---AP 227 (363)
Q Consensus 152 i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~ 227 (363)
|++ |+|++++++++ +..++.+||+|+++.|+|..+...+. ..|++++.+|.++++++++|++.+++++++ ..
T Consensus 111 i~~--~~G~~~ai~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 186 (428)
T 1iay_A 111 VVM--AGGATGANETI--IFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN 186 (428)
T ss_dssp CEE--EEHHHHHHHHH--HHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTT
T ss_pred EEE--ccChHHHHHHH--HHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcC
Confidence 988 99999999888 34446799999999999999987554 789999999985445678999999998874 12
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-------CCeEEEEE
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-------GMELLVAQ 300 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-------~~~vi~~~ 300 (363)
.+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+... .++++++.
T Consensus 187 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~viv~~ 264 (428)
T 1iay_A 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP--QFVSIAEILDEQEMTYCNKDLVHIVY 264 (428)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS--CCCCHHHHHTSGGGTTSCTTSEEEEE
T ss_pred CceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC--CccCHHHhccccccccCCCCcEEEEe
Confidence 3467788899999999999999999999999999999999999999877532 12233344333 58899999
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
||||.||++|+|+||+ ++++++ +++.+..... .++++.++|.++..+|++.
T Consensus 265 s~sK~~g~~Glr~G~~--~~~~~~----~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~ 315 (428)
T 1iay_A 265 SLSKDMGLPGFRVGII--YSFNDD----VVNCARKMSS--FGLVSTQTQYFLAAMLSDE 315 (428)
T ss_dssp ESTTTSSCGGGCEEEE--EESCHH----HHHHHHHHHT--TSCCCHHHHHHHHHHTTCH
T ss_pred cchhhcCCCCceEEEE--EeCCHH----HHHHHHHHHh--cccCCHHHHHHHHHHhcCh
Confidence 9999999999999999 776677 4444444332 3578899999998888764
No 43
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=4.4e-33 Score=271.61 Aligned_cols=264 Identities=16% Similarity=0.154 Sum_probs=206.7
Q ss_pred HHhcCCCC-CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-----------CCCCCCCcchHHHHHHHHHHHhcC-
Q 017967 76 AFKADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-----------NKEYLPIEGLAAFNKVTAELLFGA- 142 (363)
Q Consensus 76 ~~~~~~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~Y~~~~G~~~lr~aia~~l~~~- 142 (363)
.|+.+++| +.|+|+++.+ +...+.+.+++.+...... ..+|.+..|..+||+++++++...
T Consensus 30 ~y~~~~~p~~~i~lg~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~ 103 (435)
T 3piu_A 30 PYHEVHNTNGIIQMGLAEN------QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIR 103 (435)
T ss_dssp BCBTTTBTTSBEECSSCCC------CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHT
T ss_pred CCCcccCCCCeEEeccccc------cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhh
Confidence 35555665 6889998653 4557778777766442110 146989999999999999998733
Q ss_pred -CCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEEecccCCCCCCCHHHHH
Q 017967 143 -DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMI 220 (363)
Q Consensus 143 -~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~ 220 (363)
.+..+++++|++ |+||+++++++ +..++.+||.|+++.|+|..+...+. ..|++++.++.+++.++.+|++.|+
T Consensus 104 ~~~~~~~~~~v~~--~~gg~~a~~~~--~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 179 (435)
T 3piu_A 104 GNKVTFDPNHLVL--TAGATSANETF--IFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALE 179 (435)
T ss_dssp TTSSCCCGGGEEE--EEHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHH
T ss_pred CCCCCCCHHHEEE--cCChHHHHHHH--HHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHH
Confidence 345567899988 99999999988 44456799999999999999999888 7899999999865556789999999
Q ss_pred HHHHc---CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-----
Q 017967 221 ADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR----- 292 (363)
Q Consensus 221 ~~l~~---~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~----- 292 (363)
+++++ ...+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+...
T Consensus 180 ~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~d~ 257 (435)
T 3piu_A 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP--SFISVMEVLKDRNCDE 257 (435)
T ss_dssp HHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS--CCCCHHHHHHC-----
T ss_pred HHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcCHHHhcccccccc
Confidence 99874 122567888899999999999999999999999999999999999999877642 23344444332
Q ss_pred ----CCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 293 ----GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 293 ----~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.++++++.||||.||++|+|+||+ ++++++ +.+.++... .+...+.+.|.+++.+|+..
T Consensus 258 ~~~~~~~~i~i~s~sK~~g~~G~r~G~~--~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 320 (435)
T 3piu_A 258 NSEVWQRVHVVYSLSKDLGLPGFRVGAI--YSNDDM----VVAAATKMS--SFGLVSSQTQHLLSAMLSDK 320 (435)
T ss_dssp --CGGGGEEEEEESSSSSCCGGGCEEEE--EESCHH----HHHHHHHHG--GGSCCCHHHHHHHHHHHHCH
T ss_pred ccCCCCCEEEEEeeecccCCCceeEEEE--EeCCHH----HHHHHHHHh--hcCCCCHHHHHHHHHHhcCh
Confidence 578999999999999999999999 887776 444454443 34467888999888776643
No 44
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.6e-33 Score=271.46 Aligned_cols=257 Identities=14% Similarity=0.178 Sum_probs=200.3
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCc-ccCCcEEEEecc
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQRVATVQGL 158 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~-~~~~~i~~~~t~ 158 (363)
.+++|||+.|.+. .. .++.+.+.+++.+.+... ...+|.+..|..++|+++++++...++.. +++++|++ |.
T Consensus 42 ~~~~idl~~g~~~-~~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~--t~ 116 (425)
T 1vp4_A 42 DKDAISFGGGVPD-PE--TFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIF--TV 116 (425)
T ss_dssp STTCEECCCCSCC-GG--GSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEE--EE
T ss_pred CCCceeCCCCCCC-cc--cCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEE--ec
Confidence 4579999999862 22 234677777776665321 12579888899999999999985544544 56789988 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC-----CCCcEEE
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----PGGSFIL 233 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~~~~~ 233 (363)
|++++++++. ..++.+||+|+++.|+|..+...++..|++++.+|.++ + ++|++.+++.+++. ..+++++
T Consensus 117 G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~v 191 (425)
T 1vp4_A 117 GSQQALDLIG--KLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED--D-GMDLNVLERKLSEFDKNGKIKQVKFI 191 (425)
T ss_dssp HHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET--T-EECHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred cHHHHHHHHH--HHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCC--C-CCCHHHHHHHHHhhhhcccCCCceEE
Confidence 9999999883 44467999999999999999999999999999999853 2 59999999998741 0134554
Q ss_pred -EEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccccc
Q 017967 234 -LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (363)
Q Consensus 234 -~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R 312 (363)
++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ +..++++++.||||.|| +|+|
T Consensus 192 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~-~~~~~~i~~~s~sK~~~-~G~r 267 (425)
T 1vp4_A 192 YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE--TVDPIFKI-GGPERVVLLNTFSKVLA-PGLR 267 (425)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSC--CCCCHHHH-HCTTTEEEEEESTTTTC-GGGC
T ss_pred EECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC--CCcCHHHh-CCCCCEEEEeccccccc-cccc
Confidence 6899999999999999999999999999999999999999987542 12234333 44568999999999999 9999
Q ss_pred ceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 313 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 313 vG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+||+ +++ ++ +++.+.........+++.++|.++..+|+..
T Consensus 268 ~G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 307 (425)
T 1vp4_A 268 IGMV--AGS-KE----FIRKIVQAKQSADLCSPAITHRLAARYLERY 307 (425)
T ss_dssp EEEE--ECC-HH----HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHS
T ss_pred eEEE--eeC-HH----HHHHHHHHhhhhcCCCCHHHHHHHHHHHhcC
Confidence 9999 665 66 4555554444444577999999998887653
No 45
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.6e-33 Score=267.71 Aligned_cols=260 Identities=11% Similarity=0.101 Sum_probs=203.3
Q ss_pred CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 80 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 80 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
...+++|+|+.|.+. ..+++.+.+++.+.+.... ..|++. ..++++++++++...++..+++++|++ |+|
T Consensus 21 ~~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~--~~g 90 (383)
T 3kax_A 21 YKNEELIHAWIADMD-----FEVPQPIQTALKKRIEHPI-FGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVF--SAG 90 (383)
T ss_dssp CSSSCCEECCCSSCS-----SCCCHHHHHHHHHHHHSCC-CCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEE--ESC
T ss_pred cCCCCeeecccccCC-----CCCCHHHHHHHHHHHhcCC-CCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEE--cCC
Confidence 334589999999752 2246788888777665433 567654 678999999998777676677899988 999
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCC-CCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
++++++++ +..++.+||+|+++.|+|..+...++..|++++.++++.++ ++.+|++.+++.++ ++++++++++|
T Consensus 91 ~~~a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p 165 (383)
T 3kax_A 91 IVPALSTS--IQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ---QGVKLMLLCSP 165 (383)
T ss_dssp HHHHHHHH--HHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT---TTCCEEEEESS
T ss_pred HHHHHHHH--HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhC---cCCeEEEEeCC
Confidence 99999988 44457799999999999999999999999999999985322 35689999999994 34557777999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCccccccccccceEEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
|||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. ..++..+. +..++++++.||||.+|++|+|+||+
T Consensus 166 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~- 242 (383)
T 3kax_A 166 HNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHT--HTPFASLSEELAARTITCMAPSKTFNIAGLQASII- 242 (383)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE-
T ss_pred CCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCC--ceeHhhcCccccCcEEEEEEChhhccCcchhheEE-
Confidence 999999999999999999999999999999999999876421 12222221 11378999999999999999999999
Q ss_pred EeeCChhHHHHHHHHHHhhhcc-ccCCCchHHHHHHhccccccccC
Q 017967 318 VVCSSSDLAARVKSQLKRLARP-MYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~l~~~~~~-~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++++++ +++.+...... ..++++.++|.++...|+..++|
T Consensus 243 -~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 283 (383)
T 3kax_A 243 -IIPNEK----LRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDW 283 (383)
T ss_dssp -ECCCHH----HHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHH
T ss_pred -EeCCHH----HHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHH
Confidence 777777 44545444332 24588999999988887765544
No 46
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.4e-32 Score=265.28 Aligned_cols=271 Identities=18% Similarity=0.230 Sum_probs=206.0
Q ss_pred CCCchhhHHHHHhc--CCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhc
Q 017967 66 PPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFG 141 (363)
Q Consensus 66 ~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~ 141 (363)
.++.+..+...... ....++|+|+.|.+. .. .++.+.+.+++.+.+... ... |++..|..++|+++++++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~-~~--~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~ 90 (407)
T 2zc0_A 15 KGSALADVMKKASELQKKGVKLISLAAGDPD-PE--LIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKK 90 (407)
T ss_dssp CCCHHHHHHHHHHHHHHSSCCCEECCSCCCC-TT--TSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHhhhcccCCCCceEeCCCCCCC-ch--hCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHH
Confidence 34445555444431 111278999999862 22 234677777776665321 125 88888999999999999866
Q ss_pred CCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
.++..+++++|++ |+|++++++++. ..++.+||+|+++.|+|..+...++..|++++.+|.++ .++|++.+++
T Consensus 91 ~~g~~~~~~~v~~--t~g~t~a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~ 163 (407)
T 2zc0_A 91 YDHLEVSPENIVI--TIGGTGALDLLG--RVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDN---DGMRVDLLEE 163 (407)
T ss_dssp HSCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET---TEECHHHHHH
T ss_pred hcCCCCCcceEEE--ecCHHHHHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCC---CCCCHHHHHH
Confidence 5565567889988 999999999984 34467999999999999999999999999999999853 2599999999
Q ss_pred HHH----cCCCCcEE-EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE
Q 017967 222 DIK----AAPGGSFI-LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (363)
Q Consensus 222 ~l~----~~~~~~~~-~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v 296 (363)
.++ +.+ ++++ +++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ +..+++
T Consensus 164 ~l~~~~~~~~-~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~~~ 239 (407)
T 2zc0_A 164 KIKELKAKGQ-KVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGG--DIVPLKAL-DNEGRV 239 (407)
T ss_dssp HHHHHHHTTC-CEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCS--SCCCGGGG-CSSCCE
T ss_pred HHHhhhcccC-CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCC--CCCChhhc-CCCCCE
Confidence 987 422 3444 46899999999999999999999999999999999999999987532 12222222 233589
Q ss_pred EEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 297 i~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
++++||||.++ +|+|+||+ +++ ++ +++.+.........+++.+.|.++..+|+..
T Consensus 240 i~~~s~sK~~~-~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 294 (407)
T 2zc0_A 240 IVAGTLSKVLG-TGFRIGWI--IAE-GE----ILKKVLMQKQPIDFCAPAISQYIALEYLKRG 294 (407)
T ss_dssp EEEEESTTTTC-TTSCCEEE--ECC-HH----HHHHHHHHHTTTTSSSCHHHHHHHHHHHHTT
T ss_pred EEEcccccccC-CCcceEEE--ecC-HH----HHHHHHHHHHhhcCCCCHHHHHHHHHHHHcC
Confidence 99999999999 99999999 665 66 5566665555555677999999998887654
No 47
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6e-33 Score=268.52 Aligned_cols=273 Identities=14% Similarity=0.143 Sum_probs=209.7
Q ss_pred CCCCCCCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHH
Q 017967 61 GVTMAPPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (363)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (363)
++...+++++..+...++.. ..++.|+|+.|.+. . ..++.+.+++ +.+.... ..|.+..|..++|++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~-~----~~~~~v~~a~-~~l~~~~-~~y~~~~g~~~l~~~la~~ 91 (409)
T 2gb3_A 19 RVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPD-L----KTPEVFFERI-YENKPEV-VYYSHSAGIWELREAFASY 91 (409)
T ss_dssp HHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCC-S----CCCTHHHHHH-HHTCCSS-CCCCCTTCCHHHHHHHHHH
T ss_pred HhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCC-C----CCCHHHHHHH-HHHhcCC-CCCCCCCCcHHHHHHHHHH
Confidence 34445566666665544321 22478999999862 1 1356777777 6654332 5798888999999999999
Q ss_pred HhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHH
Q 017967 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (363)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 218 (363)
+...++..+++++|++ |+||+++++++. ..++.+||+|+++.|+|..+...++..|++++.+++++++++.+ ++.
T Consensus 92 ~~~~~g~~~~~~~v~~--~~g~t~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~ 166 (409)
T 2gb3_A 92 YKRRQRVDVKPENVLV--TNGGSEAILFSF--AVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQN 166 (409)
T ss_dssp HHHTSCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTT
T ss_pred HHHHhCCCCCHHHEEE--eCCHHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHH
Confidence 9887777778899988 999999999984 44467999999999999999999999999999999853234445 788
Q ss_pred HHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 219 l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
|++.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..+. +....+++++
T Consensus 167 l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~---~~~~--~~~~~~~~i~ 238 (409)
T 2gb3_A 167 LESFINE---RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE---FASA--LSIESDKVVV 238 (409)
T ss_dssp GGGGCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC---CCCG--GGSCCTTEEE
T ss_pred HHHhhCc---CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC---CCCc--cccCCCCEEE
Confidence 8887752 567778899999999999999999999999999999999999999887531 1122 1122467999
Q ss_pred EEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
++||||.+|++|+|+||+ ++++++ +++.+........ +++.++|.++..+|+..+
T Consensus 239 ~~s~sK~~g~~G~r~G~~--~~~~~~----l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~ 293 (409)
T 2gb3_A 239 IDSVSKKFSACGARVGCL--ITRNEE----LISHAMKLAQGRL-APPLLEQIGSVGLLNLDD 293 (409)
T ss_dssp EEESTTTTTCGGGCCEEE--ECSCHH----HHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCH
T ss_pred EecchhccCCccceEEEE--EECcHH----HHHHHHHHHhccC-CCCHHHHHHHHHHHhccH
Confidence 999999999999999999 777536 4555555444444 888999999888876533
No 48
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=5.1e-33 Score=272.13 Aligned_cols=253 Identities=15% Similarity=0.172 Sum_probs=193.9
Q ss_pred CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHcc----CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
..+++|+|+.|.+ +.. .++.+.+++.+.... .....|++..|..+||+++++++. ++..+++++|++
T Consensus 67 ~~~~~i~l~~g~~-~~~----~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~-- 137 (449)
T 3qgu_A 67 PDAKIISLGIGDT-TEP----LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFI-- 137 (449)
T ss_dssp TTCCCEECSSCCC-CCC----CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEE--
T ss_pred CCCCEEEeeCCCC-CCC----CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEE--
Confidence 3458999999975 222 355666666555431 233679888999999999999987 667778899988
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCC----------eEEEecccCCCCCCCHHHHHHHHHcC
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP----------WSEYRYYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~----------~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (363)
|.|+++++.++ ..++.+||+|++++|+|.++...++..|.+ ++.++++++.++..+++.+
T Consensus 138 t~G~~~al~~~---~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 207 (449)
T 3qgu_A 138 SDGSKCDIARI---QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------- 207 (449)
T ss_dssp ESCHHHHHHHH---HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-------
T ss_pred ccCHHHHHHHH---HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-------
Confidence 99999999887 345789999999999999999999999998 9999986544555555432
Q ss_pred CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++. ...++..+....++++++.||||.|
T Consensus 208 -~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~ 284 (449)
T 3qgu_A 208 -KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD--CPKTIYEIPGADEVAIETCSFSKYA 284 (449)
T ss_dssp -CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT--SCSSGGGSTTGGGTEEEEEECSGGG
T ss_pred -CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC--CCCCHhhccCCCCcEEEEecchhhc
Confidence 2355677789999999999999999999999999999999999999987642 1223333322346789999999999
Q ss_pred ccccccceEEEEeeCChhHHHH----HHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 307 GLYAERIGAMNVVCSSSDLAAR----VKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~----~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|++|+|+||+ +++ ++.++. +.+.+.......+.+++.++|.++...|++
T Consensus 285 g~~G~r~G~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 337 (449)
T 3qgu_A 285 GFTGVRLGWT--VVP-KALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQP 337 (449)
T ss_dssp TCTTCCCEEE--ECC-TTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSH
T ss_pred CCccceeEEE--ecC-HHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhh
Confidence 9999999999 766 442221 122444444556678999999999888765
No 49
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=5.3e-33 Score=267.52 Aligned_cols=257 Identities=11% Similarity=0.086 Sum_probs=197.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+++|+|+.|.+. ..+++.+.+++.+.+.... .+|++. ..++|+++++++...++..+++++|++ |+|+++
T Consensus 31 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--t~g~~~ 100 (399)
T 1c7n_A 31 NEVVPLSVADME-----FKNPPELIEGLKKYLDETV-LGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIIN--TAGVVP 100 (399)
T ss_dssp TTCCCCCSSSCS-----SCCCHHHHHHHHHHHHHCC-CSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSHHH
T ss_pred CCceeeeecCCC-----CCCCHHHHHHHHHHHhcCC-CCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEE--cCCHHH
Confidence 378999988741 2246777777776664332 568654 899999999998665565566889988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCC-CCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++++. ..++.+||+|+++.|+|.++...++..|++++.+|.++++ ++.+|++.|++.+++ .+++++++++||||
T Consensus 101 a~~~~~--~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~np 176 (399)
T 1c7n_A 101 AVFNAV--REFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--KNNKALLFCSPHNP 176 (399)
T ss_dssp HHHHHH--HHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC--TTEEEEEEESSBTT
T ss_pred HHHHHH--HHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc--CCCcEEEEcCCCCC
Confidence 999884 4446799999999999999999999999999999885222 355999999999973 24667778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-cCCeEEEEEcCccccccccccceEEEEee
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+.. ..++++++.||||.+|++|+|+||+ ++
T Consensus 177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~ 252 (399)
T 1c7n_A 177 VGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY--EHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI--II 252 (399)
T ss_dssp TTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE--EC
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CcccHHHcCccccCcEEEEEeChhhccccchheEEE--EE
Confidence 99999999999999999999999999999999987542 1122221111 1368999999999999999999999 77
Q ss_pred CChhHHHHHHHHHHhhhccc-cCCCchHHHHHHhcccccccc
Q 017967 321 SSSDLAARVKSQLKRLARPM-YSNPPPMLLGIQLSSMNGKQR 361 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~ 361 (363)
++++ +++++....... +.+++.++|.++...|+..++
T Consensus 253 ~~~~----~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 290 (399)
T 1c7n_A 253 KNPD----IRERFTKSRDATSGMPFTTLGYKACEICYKECGK 290 (399)
T ss_dssp CCHH----HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHH
T ss_pred CCHH----HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChH
Confidence 7666 444454443333 346889999988777765333
No 50
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.9e-32 Score=261.09 Aligned_cols=258 Identities=15% Similarity=0.155 Sum_probs=201.4
Q ss_pred CCCchhhHHHHHhcC--CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCC
Q 017967 66 PPDPILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 143 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~ 143 (363)
+++++.++....... ..++.|+|+.|.+. . ..++.+.+++.+.+.... .+|++..|..++|+++++++...+
T Consensus 10 ~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~-~----~~~~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~~~~ 83 (370)
T 2z61_A 10 ESFEVMDILALAQKLESEGKKVIHLEIGEPD-F----NTPKPIVDEGIKSLKEGK-THYTDSRGILELREKISELYKDKY 83 (370)
T ss_dssp CCCTTHHHHHHHHHHHHTTCCCEECCCCSCS-S----CCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHhcCCCEEEccCCCCC-C----CCCHHHHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHHHHHh
Confidence 445565555444321 23478999999862 1 125677777776664433 679888899999999999998767
Q ss_pred CCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 144 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 144 ~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
+..+++++|++ |+||+++++++. ..++.+||+|++++|+|..+...++..|++++.++ +|++.|++.+
T Consensus 84 g~~~~~~~v~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l 151 (370)
T 2z61_A 84 KADIIPDNIII--TGGSSLGLFFAL--SSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEAL 151 (370)
T ss_dssp SCCCCGGGEEE--ESSHHHHHHHHH--HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHC
T ss_pred CCCCChhhEEE--CCChHHHHHHHH--HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhc
Confidence 77778899988 999999999984 34467999999999999999999999999998886 6899999988
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
++ +++++++++||||||.+++.+ |+++|+++|+++|+||+|.++.+++. ..++..+.+..++++++.|||
T Consensus 152 ~~---~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~~~~~~i~~~s~s 221 (370)
T 2z61_A 152 SD---KTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK---CYSAIEFDENLEKTILINGFS 221 (370)
T ss_dssp CS---SEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC---CCCGGGTCTTCSSEEEEEEST
T ss_pred cc---CceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC---CcCHHHccCCCCcEEEEecCh
Confidence 63 466777899999999999988 88889999999999999999987532 122222212346899999999
Q ss_pred cccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 304 K~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|.+|++|+|+||+ +++ ++ +++.+.........+++.++|.++...|+.
T Consensus 222 K~~~~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 269 (370)
T 2z61_A 222 KLYAMTGWRIGYV--ISN-DE----IIEAILKLQQNLFISAPTISQYAALKAFEK 269 (370)
T ss_dssp TTTTCGGGCCEEE--ECC-HH----HHHHHHHHHHHHTSSSCHHHHHHHGGGGSH
T ss_pred hccCCccceEEEE--EEC-HH----HHHHHHHHHhhcccCCCHHHHHHHHHHHhc
Confidence 9999999999999 665 56 555555554445568899999999988875
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=9.7e-33 Score=264.43 Aligned_cols=257 Identities=12% Similarity=0.131 Sum_probs=201.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++|+|+.|.+. ...++.+.+++.+.+.... ..|.+. ..++++++++++...++..+++++|++ |+|++++
T Consensus 28 ~~i~~~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~--~~g~~~a 97 (391)
T 3dzz_A 28 KELPMWIAEMD-----FKIAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVF--ASGVVPA 97 (391)
T ss_dssp TCEECCSSCCS-----SCCCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEE--ESCHHHH
T ss_pred CceeccccCCC-----CCCCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEE--CCCHHHH
Confidence 79999999752 2246788888877765433 667655 689999999999877776777899988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecc-cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++++ +..++.+||+|+++.|+|..+...++..|.+++.++++ ++.++.+|++.+++++++ ++++++++++|||||
T Consensus 98 ~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~i~~p~npt 173 (391)
T 3dzz_A 98 ISAM--VRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT--PSVRMMVFCNPHNPI 173 (391)
T ss_dssp HHHH--HHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS--TTEEEEEEESSBTTT
T ss_pred HHHH--HHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc--cCceEEEEECCCCCC
Confidence 9988 44456799999999999999999999999999999985 233456999999999973 356777889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
|.+++.+++++|+++|+++|+++|+||+|.++.+.+. ...++..+. ...++++++.||||.+|++|+|+||+ +++
T Consensus 174 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~--~~~ 249 (391)
T 3dzz_A 174 GYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE--DITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA--IIP 249 (391)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEE--ECC
T ss_pred CcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC--CceehhhcCccccCcEEEEEeChhhccccchhheEE--EEC
Confidence 9999999999999999999999999999999987642 122222221 11468999999999999999999999 777
Q ss_pred ChhHHHHHHHHHHhhhc-cccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLAR-PMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~-~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++ +++.+..... ....+++.++|.++...|...++|
T Consensus 250 ~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 287 (391)
T 3dzz_A 250 NPD----LRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDW 287 (391)
T ss_dssp SHH----HHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHH
T ss_pred CHH----HHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHH
Confidence 777 4444444322 234578888888887776654433
No 52
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.3e-32 Score=263.58 Aligned_cols=256 Identities=13% Similarity=0.109 Sum_probs=201.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+|+.|.+. ..+++.+.+++.+.+.... +.|.+ +..++++++++++...++..+++++|++ |+||++
T Consensus 32 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~--~~g~~~ 101 (391)
T 4dq6_A 32 NDLLPMWVADMD-----FKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIY--SPGVIP 101 (391)
T ss_dssp SCSEECCSSSCS-----SCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHHH
T ss_pred CCceeccccCCC-----CCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEE--cCChHH
Confidence 489999998752 2346788888877765433 56654 5689999999998777776677899988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecc--cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY--DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+++++ +..++.+||+|+++.|+|..+...++..|++++.++++ ++.++.+|++.+++++++ ++++++++|||
T Consensus 102 a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~v~i~~p~n 175 (391)
T 4dq6_A 102 AISLL--INELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD----VKLFILCNPHN 175 (391)
T ss_dssp HHHHH--HHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT----EEEEEEESSBT
T ss_pred HHHHH--HHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc----CCEEEEECCCC
Confidence 99988 44446799999999999999999999999999999986 344567999999999873 67888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCccccccccccceEEEEe
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
|||.+++.+++++|+++|+++|+++|+||+|.++.+++.. ..++..+. +..++++++.||||.+|++|+|+||+ +
T Consensus 176 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~--~ 251 (391)
T 4dq6_A 176 PVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK--HIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYV--V 251 (391)
T ss_dssp TTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC--CCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEE--E
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCC--ccCHHHcCccccCcEEEEEechhhccCcccceEEE--E
Confidence 9999999999999999999999999999999999876421 12222221 11368899999999999999999999 8
Q ss_pred eCChhHHHHHHHHHHhhhc-cccCCCchHHHHHHhccccccccC
Q 017967 320 CSSSDLAARVKSQLKRLAR-PMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~-~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++++ +++.+..... ...++++.++|.++...|...++|
T Consensus 252 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 291 (391)
T 4dq6_A 252 LPDEK----DYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESW 291 (391)
T ss_dssp CCSHH----HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHH
T ss_pred eCCHH----HHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHH
Confidence 87657 4444444422 234578889998887777654443
No 53
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.7e-33 Score=271.51 Aligned_cols=250 Identities=14% Similarity=0.105 Sum_probs=191.4
Q ss_pred CCcEEeeccccCCCCCCccc-cHHHHHHH--HHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 83 EKKLNLGVGAYRTEELQPYV-LDVVKKAE--NLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~-~~~v~~a~--~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+..|||+.|.|. .. .++ .+.+.++. .+.+.. ....+|++..|.++||+++|+++. +++++|++ |
T Consensus 33 ~~~i~~~~G~p~-~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~------~~~~~i~~--t 101 (427)
T 3ppl_A 33 NLKLDLTRGKPS-SE--QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLG------VPVEQVLA--G 101 (427)
T ss_dssp CCCEECCCCSCC-HH--HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHT------SCGGGEEE--C
T ss_pred CceEecCCCCCC-hH--HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhC------CCcceEEE--e
Confidence 478999999873 11 111 12344443 333321 224789999999999999999982 35789988 9
Q ss_pred cchhHHH--HHHHHHHHHhC--C----------CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 158 LSGTGSL--RLAAALIERYF--P----------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 158 ~ggt~al--~l~~~l~~~~~--~----------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
+|+++++ +++.. .++. | ||+|++++|+|..+...++..|++++.+|++++ ++|++.|++++
T Consensus 102 ~G~~~al~~~~~~~--~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l 176 (427)
T 3ppl_A 102 DASSLNIMFDVISW--SYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELV 176 (427)
T ss_dssp SSCHHHHHHHHHHH--HHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHT
T ss_pred CCcHHHHHHHHHHH--HHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHH
Confidence 9999999 46633 3344 5 899999999999999999999999999999642 59999999988
Q ss_pred HcCCCCcEEEE-EcCCCCCCCCCCCHHHHHHHHHHH-HhcCCeEEEecCCCCCcCCCCCCchhHHHHHH---hcCCeEEE
Q 017967 224 KAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVI-QEKNHIPFFDVAYQGFASGSLDNDASSVRLFA---TRGMELLV 298 (363)
Q Consensus 224 ~~~~~~~~~~~-i~~p~NPTG~~~s~~~~~~i~~~~-~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~---~~~~~vi~ 298 (363)
+. +++++++ +++||||||.+++.+++++|+++| +++|+++|+||+|.++.+++......++..+. +..+++++
T Consensus 177 ~~--~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (427)
T 3ppl_A 177 KN--PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWA 254 (427)
T ss_dssp TS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEE
T ss_pred hc--CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEE
Confidence 42 2344444 558999999999999999999999 99999999999999977754322222333331 35679999
Q ss_pred EEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++||||. +++|+|+||+ +++ ++ +++.+.........+++.+.|.+++.+|+.
T Consensus 255 ~~S~SK~-~~~G~r~G~~--~~~-~~----l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 306 (427)
T 3ppl_A 255 FTSTSKI-TLAGAGVSFF--LTS-AE----NRKWYTGHAGIRGIGPNKVNQLAHARYFGD 306 (427)
T ss_dssp EEESTTT-SCTTSSCEEE--ECC-HH----HHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred Eechhhc-cCcCccEEEE--EcC-HH----HHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 9999999 6799999999 665 66 566666666666778999999999988876
No 54
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=2.4e-32 Score=266.08 Aligned_cols=250 Identities=16% Similarity=0.190 Sum_probs=186.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHc----cCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE----RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~----~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
+++|+|++|.+. .. .++.+.+++.+... .....+|++..|..+||+++++++.+ +..+++++|++ |+
T Consensus 56 ~~~i~l~~~~~~-~~----~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~--t~ 126 (432)
T 3ei9_A 56 AQVISLGIGDTT-EP----IPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFV--SD 126 (432)
T ss_dssp CCCEECSSCCCC-SC----CCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEE--ES
T ss_pred CCeEEccCCCCC-CC----CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEE--CC
Confidence 479999999863 22 34556666555443 12235788888999999999999863 45566889988 99
Q ss_pred chhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCC------------CCeEEEecccCCCCCCCHHHHHHHHHcC
Q 017967 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR------------VPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 159 ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (363)
|+++++.++ ..++.+||.|+++.|+|.++...++..| .+++.++++++.++..|++. .
T Consensus 127 G~~~al~~l---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~ 196 (432)
T 3ei9_A 127 GAKCDISRL---QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-------V 196 (432)
T ss_dssp CHHHHHHHH---HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-------C
T ss_pred ChHHHHHHH---HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-------C
Confidence 999998865 4557899999999999999999888777 37888888544344455433 1
Q ss_pred CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++..+....++++++.||||.|
T Consensus 197 -~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~---~~~~~~~~~~~~~~i~~~S~SK~~ 272 (432)
T 3ei9_A 197 -GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN---PRSIFEIPGAEEVAMETASFSNYA 272 (432)
T ss_dssp -CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC---CSSGGGSTTGGGTEEEEEESHHHH
T ss_pred -CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC---CCChhhcCCCCCeEEEEecchhcc
Confidence 2455777789999999999999999999999999999999999999987632 223322222346799999999999
Q ss_pred ccccccceEEEEeeCChhH---HHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 307 GLYAERIGAMNVVCSSSDL---AARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~---~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|++|+|+||+ +++++.. ...+++.+.......+.+++.++|.++..+|.
T Consensus 273 g~~G~r~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (432)
T 3ei9_A 273 GFTGVRLGWT--VIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLT 324 (432)
T ss_dssp CTTTTCCEEE--ECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSS
T ss_pred CCcccceEEE--EEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence 9999999999 7764420 00014445444445567899999998887775
No 55
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=5.2e-32 Score=259.13 Aligned_cols=259 Identities=19% Similarity=0.156 Sum_probs=198.6
Q ss_pred CCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCC
Q 017967 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (363)
.+..+..+...... ++.|+|+.|.+. . ..++.+.+++.+.+.. ...|.+..|..++|+++++++..
T Consensus 11 ~~~~~~~~~~~~~~---~~~i~l~~~~~~-~----~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~~~---- 76 (381)
T 1v2d_A 11 KESIFPRMSGLAQR---LGAVNLGQGFPS-N----PPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEFAV---- 76 (381)
T ss_dssp ---CHHHHHHHHHH---HTCEECCCCSCS-S----CCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHHTS----
T ss_pred CccHHHHHHHHHhc---CCeEEecCCCCC-C----CCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhcCC----
Confidence 33445444444433 368999999862 1 1457777777776644 35798878999999999999632
Q ss_pred cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc-CCCCCCCHHHHHHHHH
Q 017967 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIK 224 (363)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~ 224 (363)
++++|++ |.||+++++++. ..++.+||+|++++|+|..+...++..|++++.++++. ++++.+|++.+++.++
T Consensus 77 --~~~~v~~--~~g~~~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~ 150 (381)
T 1v2d_A 77 --EPESVVV--TSGATEALYVLL--QSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT 150 (381)
T ss_dssp --CGGGEEE--ESSHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC
T ss_pred --ChhhEEE--cCChHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC
Confidence 2578877 999999999984 34467999999999999999999999999999999841 1347899999998875
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 304 (363)
++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++.. ..++..+ ..+.++++.||||
T Consensus 151 ---~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~---~~~~~~~--~~~~~~~~~s~sK 222 (381)
T 1v2d_A 151 ---PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGER---PRRLREF--APERTFTVGSAGK 222 (381)
T ss_dssp ---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC---CCCHHHH--CTTTEEEEEEHHH
T ss_pred ---cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC---CCCHHHh--cCCCEEEEeechh
Confidence 3467778899999999999999999999999999999999999999987321 1233333 4578999999999
Q ss_pred ccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 305 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 305 ~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.+|++|+|+||+ +++ ++ +++.+........++++.+.|.++...|+..
T Consensus 223 ~~~~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 270 (381)
T 1v2d_A 223 RLEATGYRVGWI--VGP-KE----FMPRLAGMRQWTSFSAPTPLQAGVAEALKLA 270 (381)
T ss_dssp HTTCGGGCCEEE--ECC-TT----THHHHHHHHHHHTSSCCHHHHHHHHHHHHHH
T ss_pred hcCCcccceEEE--EeC-HH----HHHHHHHHHhhcccCCCcHHHHHHHHHHhCc
Confidence 999999999999 665 55 3444444443445578889999888777644
No 56
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=4.4e-32 Score=260.46 Aligned_cols=256 Identities=16% Similarity=0.093 Sum_probs=195.0
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHH-HHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAA-FNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~-lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
+++|+|+.|.+. ..+++.+.+++.+.+.... ..|++. ..+ +|+++++++...++..+++++|++ |+|++
T Consensus 28 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~--t~g~~ 97 (390)
T 1d2f_A 28 ADLLPFTISDMD-----FATAPCIIEALNQRLMHGV-FGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVY--GPSVI 97 (390)
T ss_dssp --CEECCSSSCS-----SCCCHHHHHHHHHHHTTCC-CCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEE--ESCHH
T ss_pred CCeeEeeecCCC-----CCCCHHHHHHHHHHHhCCC-CCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEE--cCCHH
Confidence 378999998752 1246788888877764433 578664 678 999999998776676677899988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCC-CCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
++++++ +..++.+||+|+++.|+|..+...++..|++++.+|++.+. ++.+|++.+++.+++ .+++++++++|||
T Consensus 98 ~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~l~~p~n 173 (390)
T 1d2f_A 98 YMVSEL--IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK--PECKIMLLCSPQN 173 (390)
T ss_dssp HHHHHH--HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS--TTEEEEEEESSCT
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc--CCCeEEEEeCCCC
Confidence 999988 34446799999999999999999999999999999985432 356899999999973 2466777799999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ .....-+ +.||||.+|++|+|+||+ ++
T Consensus 174 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~-~~~~~d~-~~s~sK~~~~~G~r~G~~--~~ 247 (390)
T 1d2f_A 174 PTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ--PHIPWSNV-ARGDWAL-LTSGSKSFNIPALTGAYG--II 247 (390)
T ss_dssp TTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSS--CCCCGGGT-CCSSEEE-EECSHHHHTCGGGCCEEE--EE
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcCHHHc-chhhHhh-ccCccHhhcccChhheEE--EE
Confidence 999999999999999999999999999999999987532 12222111 1111023 999999999999999999 77
Q ss_pred CChhHHHHHHHHHHhhhc--cccCCCchHHHHHHhccccccccC
Q 017967 321 SSSDLAARVKSQLKRLAR--PMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~--~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++++ +++.+..... ..+.+++.++|.++...|+..++|
T Consensus 248 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 287 (390)
T 1d2f_A 248 ENSS----SRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPW 287 (390)
T ss_dssp CSHH----HHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHH
T ss_pred CCHH----HHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHH
Confidence 7677 4455544433 234478899998887776643333
No 57
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2.2e-31 Score=251.99 Aligned_cols=244 Identities=17% Similarity=0.192 Sum_probs=197.6
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+++|+|+.|.+. ..+++.+.+++.+.+.. ...| +..|..++|+++++++. +++++|++ |+||+
T Consensus 15 ~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~--~~g~~ 78 (354)
T 3ly1_A 15 TDNPIRINFNENP-----LGMSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHHQ------VEAPSILL--TAGSS 78 (354)
T ss_dssp SSSCEECSSCCCS-----SCCCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHTT------SCGGGEEE--ESHHH
T ss_pred CCceEEccCCCCC-----CCCCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHhC------CChHHEEE--eCChH
Confidence 3489999998752 22567888888776643 2667 66789999999999963 34689988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++++++. ..++.+||+|+++.|+|..+...++..|++++.++.+ .++++|++.+++.+++. ++++++++++||||
T Consensus 79 ~a~~~~~--~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~~~-~~~~~v~l~~p~np 153 (354)
T 3ly1_A 79 EGIRAAI--EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML--DNWAFDIEGLKAAVAAY-SGPSIVYLVNPNNP 153 (354)
T ss_dssp HHHHHHH--HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHHHTC-SSCEEEEEESSCTT
T ss_pred HHHHHHH--HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhccC-CCCCEEEEeCCCCC
Confidence 9999983 4446799999999999999999999999999999984 35899999999999842 24667778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC-CeEEEEEcCccccccccccceEEEEee
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG-MELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
||.+++.+++.+|+++| ++|+++|+||+|.++.+++. ..+.....+.. +++++++||||.+|++|+|+||+ ++
T Consensus 154 tG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~--~~ 227 (354)
T 3ly1_A 154 TGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR---FRSISPMITQGAENIILLKTFSKIHAMAGMRVGYA--VA 227 (354)
T ss_dssp TCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT---CCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEE--EC
T ss_pred cCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc---cCCHHHHhhhcCCCEEEEeeChhhccChhhhheee--ec
Confidence 99999999999999999 89999999999999887642 22233333445 88999999999999999999999 66
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+++ +++.++..... .+++.++|.++...|+..
T Consensus 228 -~~~----~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~ 259 (354)
T 3ly1_A 228 -HPT----VIALMGRYVAG--EKINFSGVDAALASMNDS 259 (354)
T ss_dssp -CHH----HHHHHGGGTTC--SCCCHHHHHHHHHHTTCH
T ss_pred -CHH----HHHHHHHhcCC--CCCCHHHHHHHHHHhcCH
Confidence 466 66666665443 689999999998887753
No 58
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.98 E-value=3.6e-32 Score=264.28 Aligned_cols=260 Identities=16% Similarity=0.080 Sum_probs=191.2
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHH---ccCCCCCCCCCcchHHHHHHHHHHHhcCCCCc
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML---ERGENKEYLPIEGLAAFNKVTAELLFGADNSV 146 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~---~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~ 146 (363)
++.....++.. .++|+|+.|+| +... ..+++.+.+++.+.. ......+|++..|.++||+++|+++.
T Consensus 21 ~~~~~~~l~~~--~~~i~l~~g~~-~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~------ 90 (422)
T 3d6k_A 21 VTAKYAELKAK--NLSLDLTRGKP-SAEQ-LDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG------ 90 (422)
T ss_dssp HHHHHHHHHHT--TCCEECCCCSC-CHHH-HHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHT------
T ss_pred HHHHHHHHhcc--CCeEeCCCCCC-Chhh-CCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhC------
Confidence 44444444443 25899999987 2110 112234555443221 11123689999999999999999983
Q ss_pred ccCCcEEEEeccchhHHH--HHHHHHHHHhCC------------CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCC
Q 017967 147 LKEQRVATVQGLSGTGSL--RLAAALIERYFP------------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV 212 (363)
Q Consensus 147 ~~~~~i~~~~t~ggt~al--~l~~~l~~~~~~------------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 212 (363)
+++++|++ |+|+++++ .++...+ ..+ ||+|+++.|+|..|...++..|++++.+|++++
T Consensus 91 ~~~~~i~~--t~G~~~al~l~~~~~~l--~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--- 163 (422)
T 3d6k_A 91 LPADLVVA--QDGSSLNIMFDLISWSY--TWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE--- 163 (422)
T ss_dssp CCGGGEEE--CSSCHHHHHHHHHHHHH--HHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---
T ss_pred CChhHEEE--ecchHHHHHHHHHHHHh--cCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---
Confidence 35789988 99999996 5553322 234 347999999999999999999999999998532
Q ss_pred CCCHHHHHHHHHcCCCCcEEEE-EcCCCCCCCCCCCHHHHHHHHHHHH-hcCCeEEEecCCCC--CcCCCCCCchhHHHH
Q 017967 213 GLDFEGMIADIKAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVAYQG--FASGSLDNDASSVRL 288 (363)
Q Consensus 213 ~~d~~~l~~~l~~~~~~~~~~~-i~~p~NPTG~~~s~~~~~~i~~~~~-~~~~~ii~De~y~~--~~~~~~~~~~~~~~~ 288 (363)
++|++.|++.+++ .++++++ +++||||||.+++.+++++|+++|+ ++|+++|+||+|.+ |.+++ ....++..
T Consensus 164 g~d~~~l~~~l~~--~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~--~~~~~~~~ 239 (422)
T 3d6k_A 164 GPDMGVVRELVKD--PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEF--PIVHNVIE 239 (422)
T ss_dssp EECHHHHHHHHTS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC--CCCCCHHH
T ss_pred CCCHHHHHHHHhc--CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCC--CCCcChhh
Confidence 5999999999863 2345544 7999999999999999999999999 99999999999986 54332 12223322
Q ss_pred H---HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 289 F---ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 289 ~---~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+ .+..+++++++||||. +++|+|+||+ +++ ++ +++.+.........+++.++|.++..+|++
T Consensus 240 ~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~--~~~-~~----l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 240 FAQAAGNPNRFWFMSSTSKI-THAGSGVSFF--ASS-KE----NIEWYASHANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp HHHHTTCTTCEEEEEESTTT-SCTTSSCEEE--ECC-HH----HHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred HhhccCCCCcEEEEcChhhh-cCcccceEEE--EeC-HH----HHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence 2 2456789999999998 6799999999 766 66 556666555555668899999999988876
No 59
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.98 E-value=1.6e-31 Score=254.11 Aligned_cols=255 Identities=14% Similarity=0.141 Sum_probs=200.1
Q ss_pred CCCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCC
Q 017967 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (363)
+..++..+.+.+.. +++|+|+.|++. ..+++.+.+++.+.... ..+|++..+ .++|+++|+++.
T Consensus 16 ~~~~~~~~~~~~~~---~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~----- 79 (365)
T 3get_A 16 PGKDIEVIAKEYGV---KEVIKLASNENP-----FGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKYK----- 79 (365)
T ss_dssp CCCCHHHHHHHTTC---SCCEECSSCCCT-----TCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHHT-----
T ss_pred CCCCHHHHHHhcCC---CceEEecCCCCC-----CCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHhC-----
Confidence 34445455444433 589999998852 22467888887776643 367877666 899999999973
Q ss_pred cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
+++++|++ |+|++++++++ +..++.+||+|+++.|+|..+...++..|++++.+++ +++++ +|++.++++++
T Consensus 80 -~~~~~v~~--~~g~~~a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~- 151 (365)
T 3get_A 80 -VQNENIII--GAGSDQVIEFA--IHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHK- 151 (365)
T ss_dssp -CCGGGEEE--ESSHHHHHHHH--HHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTT-
T ss_pred -CCcceEEE--CCCHHHHHHHH--HHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhC-
Confidence 24689988 99999999988 4445679999999999999999999999999999998 34567 99999999987
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcC--CCCCCchhHHHHHHhcCCeEEEEEcCc
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGMELLVAQSYS 303 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~vi~~~S~S 303 (363)
++++++++++||||||.+++.+++.+|+++| ++|+++|+||+|.++.+ .+. ...+.....+..+++++++|||
T Consensus 152 --~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~s 226 (365)
T 3get_A 152 --DEIKLIFLCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSK--KHLEPCELIKEFDNVLYLGTFS 226 (365)
T ss_dssp --TTEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGG--GCCCHHHHHHHCTTEEEEEESS
T ss_pred --CCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCc--ccccHhHHhccCCCEEEEeecc
Confidence 3577888899999999999999999999998 57999999999998874 221 1223333445668999999999
Q ss_pred cccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 304 K~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|.+|++|+|+||+ ++ +++ +++.+...... ++++.++|.++...|+.
T Consensus 227 K~~~~~G~r~G~~--~~-~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~l~~ 272 (365)
T 3get_A 227 KLYGLGGLRIGYG--IA-NAN----IISAFYKLRAP--FNVSNLALKAAVAAMDD 272 (365)
T ss_dssp STTSCTTTCCEEE--EE-CHH----HHHHHHHHSCT--TCSCHHHHHHHHHHHTC
T ss_pred hHhcCcchheEEE--Ec-CHH----HHHHHHHhcCC--CCcCHHHHHHHHHHhCC
Confidence 9999999999999 66 477 56666555432 46999999999888775
No 60
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.98 E-value=1.7e-32 Score=265.26 Aligned_cols=267 Identities=19% Similarity=0.130 Sum_probs=191.0
Q ss_pred CCchhhHHHHH-hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC----CCCCCCCCcchHHHHHHHHHHHhc
Q 017967 67 PDPILGVSEAF-KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFG 141 (363)
Q Consensus 67 ~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~l~~ 141 (363)
++.+..+...+ +...++++|+|+.|.|. ..+.+.+.+.+++.+..... ...+|.+..|.++||+++|+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 90 (417)
T 3g7q_A 14 HSGITRLMEDLNDGLRTPGAIMLGGGNPA---HIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRE 90 (417)
T ss_dssp --CHHHHHHHHHC-----CCEECSCCCCC---CCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhhccCCCceEecCcCCC---CCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHH
Confidence 44555555444 44455789999999873 23444577777777665321 114799999999999999999987
Q ss_pred CCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCC-----EEEEc-CCCCcchHHHHh------hCCCCeEEEecccC
Q 017967 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA-----KVLIS-SPTWGNHKNIFN------DARVPWSEYRYYDP 209 (363)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd-----~Vlv~-~P~y~~~~~~~~------~~G~~~~~v~~~~~ 209 (363)
.++..+++++|++ |+|++++++++. ..++.+|| +|+++ .|+|..+...+. ..+..+..++.+ .
T Consensus 91 ~~g~~~~~~~i~~--t~G~t~al~~~~--~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 165 (417)
T 3g7q_A 91 TLGWDIEPQNIAL--TNGSQSAFFYLF--NLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG-Q 165 (417)
T ss_dssp HHCCCCCGGGEEE--ESCHHHHHHHHH--HHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGG-E
T ss_pred HhCCCCCcccEEE--eCCcHHHHHHHH--HHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCc-c
Confidence 7777788999988 999999999984 44467887 89997 999999987653 223344444431 1
Q ss_pred CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 210 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 210 ~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
.++.+|++.++ +. ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.......+..
T Consensus 166 ~~~~~d~~~l~--~~---~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~----- 235 (417)
T 3g7q_A 166 FKYHVDFEHLH--IG---EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEAR----- 235 (417)
T ss_dssp EEEECCGGGCC--CC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCC-----
T ss_pred cccccCHHHhc--cc---cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccc-----
Confidence 24578999887 33 457888999999999999999999999999999999999999998643211000000
Q ss_pred HhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
....++++++.|||| ++++|+|+||+ +++ ++ +++++.........+++.++|.++..+|+..
T Consensus 236 ~~~~~~~i~~~s~sK-~~~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (417)
T 3g7q_A 236 PLWNPNIILCMSLSK-LGLPGSRCGII--IAN-DK----TITAIANMNGIISLAPGGMGPAMMCEMIKRN 297 (417)
T ss_dssp CCCCTTEEEEEESGG-GTCTTSCCEEE--ECC-HH----HHHHHHHHHHHHCCCCCSHHHHHHHHHHHTT
T ss_pred cCCCCCEEEEEechh-ccCCCcceEEE--EeC-HH----HHHHHHHhhcceeeCCCcHHHHHHHHHHcCc
Confidence 123478999999999 68899999999 664 66 5666666666666788999999998877653
No 61
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.98 E-value=2.3e-31 Score=256.16 Aligned_cols=250 Identities=18% Similarity=0.187 Sum_probs=194.0
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
.+++|+|+.|.+. .. .++.+.+.+++.+.+... ...+|.+..|..++|+++++++. +++++|++ |.|
T Consensus 31 ~~~~i~l~~g~~~-~~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g------~~~~~v~~--~~g 99 (397)
T 2zyj_A 31 RPGILSFAGGLPA-PE--LFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIG------VRPEEVLI--TTG 99 (397)
T ss_dssp STTCEEESSCCCC-GG--GCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHT------SCGGGEEE--ESH
T ss_pred CCCceecCCCCCC-ch--hCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhC------CChhhEEE--ecc
Confidence 3578999998852 22 234567777766554321 12578888899999999999982 34689988 999
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
++++++++. ..++.+||+|+++.|+|..+...++..|++++.+|.++ .++|++.+++.+++. +...++++++||
T Consensus 100 ~~~al~~~~--~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~---~~~d~~~l~~~l~~~-~~~~v~~~~~~~ 173 (397)
T 2zyj_A 100 SQQALDLVG--KVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE---EGPDLDALEEVLKRE-RPRFLYLIPSFQ 173 (397)
T ss_dssp HHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET---TEECHHHHHHHHHHC-CCSCEEECCBSC
T ss_pred HHHHHHHHH--HHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCC---CCCCHHHHHHHHhhc-CCeEEEECCCCc
Confidence 999999884 34467999999999999999999999999999999853 259999999999752 223445679999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcC---CeEEEEEcCccccccccccceEE
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG---MELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~---~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ +.. +++++++||||.+| +|+|+||+
T Consensus 174 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~-~~~~~~~~~i~~~s~sK~~~-~G~r~G~~ 249 (397)
T 2zyj_A 174 NPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA--RLPSLFEL-AREAGYPGVIYLGSFSKVLS-PGLRVAFA 249 (397)
T ss_dssp TTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC--CCCCHHHH-HHHHTCCCEEEEEESTTTTC-GGGCCEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC--CCCchhhh-CcccCCCeEEEEeccccccc-ccceeEEE
Confidence 9999999999999999999999999999999999987532 12233333 223 68999999999999 99999999
Q ss_pred EEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 317 NVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 317 ~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+++ ++ +++.+.........+++.++|.++..+|+..
T Consensus 250 --~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 285 (397)
T 2zyj_A 250 --VAH-PE----ALQKLVQAKQGADLHTPMLNQMLVHELLKEG 285 (397)
T ss_dssp --ECC-HH----HHHHHHHHHHHHHSSCCHHHHHHHHHHHTTT
T ss_pred --ecC-HH----HHHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence 665 66 4555554444444567999999998887754
No 62
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.98 E-value=2.1e-32 Score=274.21 Aligned_cols=222 Identities=12% Similarity=0.049 Sum_probs=171.2
Q ss_pred cEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcC-CCC---cccCCcEEEEeccch
Q 017967 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA-DNS---VLKEQRVATVQGLSG 160 (363)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~-~~~---~~~~~~i~~~~t~gg 160 (363)
.|+|++|.+. +.++.+.+++.+.... .+|++..|..++|+++++++... .+. ..++++|++ |.|+
T Consensus 106 ~i~l~~g~~~------~~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~--t~G~ 174 (546)
T 2zy4_A 106 SLSYVRDQLG------LDPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFA--VEGG 174 (546)
T ss_dssp HHHHHHHTSC------CCHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEE--EEHH
T ss_pred hhecccCCCC------CCChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEE--ECCH
Confidence 7899999862 2234455555444422 57998989999999988766432 222 225689988 9999
Q ss_pred hHHHHHHHHHHH---HhCCCCEEEEcCCCCcchHHHHh--hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEE
Q 017967 161 TGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFN--DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (363)
Q Consensus 161 t~al~l~~~l~~---~~~~gd~Vlv~~P~y~~~~~~~~--~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i 235 (363)
++++.++...+. ++.|||.|++++|+|..|...+. ..|++++.++++++.++.+|++.+++.+. .+++++++
T Consensus 175 ~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l 251 (546)
T 2zy4_A 175 TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD---PAIKIFFC 251 (546)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS---TTEEEEEE
T ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC---CCCeEEEE
Confidence 999998854331 35699999999999999998754 45788999998665567899999988764 35677888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHH--HhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccc
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVI--QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 313 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~--~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv 313 (363)
+|||||||.+++.+++++|+++| +++|++||+||+|.+|.++ ..++... ..+++++++||||.+|++|+|+
T Consensus 252 ~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~-----~~s~~~~--~~~~~i~~~S~SK~~g~~GlRi 324 (546)
T 2zy4_A 252 VNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD-----FQSLFAI--CPENTLLVYSFSKYFGATGWRL 324 (546)
T ss_dssp ESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT-----CCCHHHH--CGGGEEEEEESTTTTTCGGGCE
T ss_pred ECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc-----CcCHHHh--CCCCEEEEEeCccccCCCCcce
Confidence 89999999999999999999999 7899999999999999853 1233222 2368999999999999999999
Q ss_pred eEEEEeeCChhHHHHH
Q 017967 314 GAMNVVCSSSDLAARV 329 (363)
Q Consensus 314 G~i~~v~~~~~~~~~~ 329 (363)
||+ ++++++.++++
T Consensus 325 G~~--~~~~~~l~~~l 338 (546)
T 2zy4_A 325 GVV--AAHQQNVFDLA 338 (546)
T ss_dssp EEE--EEESSCHHHHH
T ss_pred EEE--EECCHHHHHHH
Confidence 999 77755455554
No 63
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.98 E-value=1.3e-31 Score=260.17 Aligned_cols=258 Identities=14% Similarity=0.073 Sum_probs=203.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+|++|.+. ...++.+.+++.+...... +.|.+.. .++++++++++...++..+++++|++ |+|+++
T Consensus 61 ~~~i~~~~~~~~-----~~~~~~v~~a~~~~~~~~~-~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~~v~~--~~g~~e 130 (421)
T 3l8a_A 61 PELLQMWVADMD-----FLPVPEIKEAIINYGREHI-FGYNYFN--DDLYQAVIDWERKEHDYAVVKEDILF--IDGVVP 130 (421)
T ss_dssp TTCEECCSSCCC-----SCCCHHHHHHHHHHHHHCC-SSCBCCC--HHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHHH
T ss_pred CCeeecccCCCC-----CCCCHHHHHHHHHHHhcCC-cCCCCCC--HHHHHHHHHHHHHHhCCCCCHHHEEE--cCCHHH
Confidence 489999999742 2246777777776664433 5675543 79999999999877776677899988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecc-cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
|++++. ..++.+||+|+++.|+|.++...++..|.+++.+|++ .+.++.+|++.|++++++ ++++++++++||||
T Consensus 131 a~~~a~--~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~--~~~~~vil~~p~np 206 (421)
T 3l8a_A 131 AISIAL--QAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID--NNVKIYLLCSPHNP 206 (421)
T ss_dssp HHHHHH--HHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH--TTEEEEEEESSBTT
T ss_pred HHHHHH--HHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc--cCCeEEEECCCCCC
Confidence 999984 4446799999999999999999999999999999985 344567899999999974 35778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH-hcCCeEEEEEcCccccccccccceEEEEee
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
||.+++.+++++|.++|+++|+++|+||+|.++.+.+.. ..++..+. +..++++++.|+||.+|++|+|+||+ ++
T Consensus 207 tG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~--~~ 282 (421)
T 3l8a_A 207 GGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT--HHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA--II 282 (421)
T ss_dssp TTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC--CCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEE--EC
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC--CccHHHcCchhcCcEEEEEeChhhccCchhheEeE--Ec
Confidence 999999999999999999999999999999999876421 12222221 22468899999999999999999999 88
Q ss_pred CChhHHHHHHHHHHhhh-ccccCCCchHHHHHHhccccccccC
Q 017967 321 SSSDLAARVKSQLKRLA-RPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~-~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++++ +++.+.... ...+.+++.++|.++...|+..++|
T Consensus 283 ~~~~----l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~ 321 (421)
T 3l8a_A 283 QNES----LRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPW 321 (421)
T ss_dssp CSHH----HHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHH
T ss_pred CCHH----HHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHH
Confidence 7777 444444443 2345578899999888877765555
No 64
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.97 E-value=2.3e-31 Score=256.62 Aligned_cols=250 Identities=18% Similarity=0.166 Sum_probs=182.8
Q ss_pred CCCCcEEeeccccCCCCCCccccHHHHHHHHHHHcc----CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
+.+++|+|+.|.+. ..+++.+.+++.+.... ....+|.+..|..+||+++++++. .+. +++++|++
T Consensus 31 ~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~-- 100 (400)
T 3asa_A 31 PQHTVINLSIGDTT-----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFI-- 100 (400)
T ss_dssp TTSCCEECSSCCCC-----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEE--
T ss_pred CCCceEeccCCCCC-----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEE--
Confidence 34589999999862 12355666665554421 123679888899999999999964 343 56789988
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCC-eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i 235 (363)
|.|+++++.++. ..+.+||+|+++.|+|..+...++..|.+ ++.+|++++..+..+++.+ ++++++++
T Consensus 101 ~~G~~~al~~~~---~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~--------~~~~~v~l 169 (400)
T 3asa_A 101 SDGAKVDLFRLL---SFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPED--------THIDILCL 169 (400)
T ss_dssp ESCHHHHHHHHH---HHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTT--------CCCSEEEE
T ss_pred ccChHHHHHHHH---HHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhc--------cCccEEEE
Confidence 999999998863 44679999999999999999999999999 9999985433333443221 23456667
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceE
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. ..++..+....+++++++||||.||++|+|+||
T Consensus 170 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~ 247 (400)
T 3asa_A 170 CSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSL--PKSIFEIPDARFCAIEINSFSKPLGFAGIRLGW 247 (400)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTS--CSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEE
T ss_pred eCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCC--CCchhhCCCCCCceEEEecchhhcCCcchheeE
Confidence 899999999999999999999999999999999999988765311 112211111135789999999999999999999
Q ss_pred EEEeeCChhH-------HHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 316 MNVVCSSSDL-------AARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 316 i~~v~~~~~~-------~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
+ +++ ++. ++.+... .....+.+++.++|.++..+|+..
T Consensus 248 ~--~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~ 292 (400)
T 3asa_A 248 T--VIP-QELTYADGHFVIQDWER---FLSTTFNGASIPAQEAGVAGLSIL 292 (400)
T ss_dssp E--ECC-TTCBCTTSCBHHHHHHH---HHHHHCCCCCHHHHHHHHHHHHHT
T ss_pred E--eeC-hhhccchhhhHHHHHHH---HhccCccCCChHHHHHHHHHhCcH
Confidence 9 776 443 3333221 112234578999999988877653
No 65
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.97 E-value=3.2e-31 Score=252.99 Aligned_cols=216 Identities=20% Similarity=0.188 Sum_probs=181.1
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 199 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~ 199 (363)
.+|++..|..+||+++++++.. +++++|++ |+||++|+.++ +..++.+||+|+++.|+|..+...++..|+
T Consensus 57 ~~y~~~~g~~~l~~~la~~~~~-----~~~~~v~~--~~g~~~a~~~~--~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~ 127 (375)
T 3op7_A 57 LNYGWIEGSPAFKKSVSQLYTG-----VKPEQILQ--TNGATGANLLV--LYSLIEPGDHVISLYPTYQQLYDIPKSLGA 127 (375)
T ss_dssp CSSCCTTCCHHHHHHHHTTSSS-----CCGGGEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESSCTHHHHHHHHTTC
T ss_pred cCCCCCCChHHHHHHHHHHhcc-----CChhhEEE--cCChHHHHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcCC
Confidence 7899999999999999998632 34689988 99999999988 444578999999999999999999999999
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++++.++++.+|++.+++++++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++
T Consensus 128 ~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~- 203 (375)
T 3op7_A 128 EVDLWQIEEENGWLPDLEKLRQLIRP---TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELD- 203 (375)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCT---TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSC-
T ss_pred EEEEEeccccCCCCCCHHHHHHhhcc---CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccC-
Confidence 99999986555677899999999863 45677789999999999999999999999999999999999999988752
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
..+. .+..++++++.||||.+|++|+|+||+ ++ +++ +++.++........+++.+.|.++...|+..
T Consensus 204 ---~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~v--~~-~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 270 (375)
T 3op7_A 204 ---VPSI---IEVYDKGIAVNSLSKTYSLPGIRIGWV--AA-NHQ----VTDILRDYRDYTMICAGVFDDLVAQLALAHY 270 (375)
T ss_dssp ---CCCH---HHHCTTEEEEEESSSSSSCGGGCCEEE--EC-CHH----HHHHHTTTGGGTTSCCCHHHHHHHHHHHHTH
T ss_pred ---CCch---hhhcCCEEEEeEChhhcCCcccceEEE--Ee-CHH----HHHHHHHHHhhhccCCCcHHHHHHHHHHhcc
Confidence 1122 234578899999999999999999999 66 577 6677766666666788899999887776654
Q ss_pred cc
Q 017967 360 QR 361 (363)
Q Consensus 360 ~~ 361 (363)
++
T Consensus 271 ~~ 272 (375)
T 3op7_A 271 QE 272 (375)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 66
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.97 E-value=7.4e-32 Score=261.75 Aligned_cols=253 Identities=15% Similarity=0.094 Sum_probs=191.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHH--HHHcc-CCCCCC-CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEecc
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAEN--LMLER-GENKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~--~~~~~-~~~~~Y-~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (363)
.+.|||+.|.|... . ...++.+.+++. +.... ....+| .+..|.++||+++|+++. +++++|++ |+
T Consensus 25 ~~~i~l~~g~p~~~-~-~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~------~~~~~i~~--t~ 94 (423)
T 3ez1_A 25 GLNLNMQRGQPADA-D-FDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLD------VKAENVLV--WN 94 (423)
T ss_dssp TCCEESCCCCCCHH-H-HHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTT------SCGGGEEE--CS
T ss_pred CceEecCCCCCChH-h-CCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhC------CChhhEEE--eC
Confidence 37899999987310 0 112334555543 33221 123679 888999999999999972 34789988 99
Q ss_pred chhHHHH--HHHHHHHHhC--C---------CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 159 SGTGSLR--LAAALIERYF--P---------GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 159 ggt~al~--l~~~l~~~~~--~---------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
|+++++. ++ +..++. | ||+|+++.|+|..+...++..|++++.+|++++ ++|++.|++++++
T Consensus 95 G~~~al~~~~~--~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~ 169 (423)
T 3ez1_A 95 NSSLELQGLVL--TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGT 169 (423)
T ss_dssp SCHHHHHHHHH--HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHS
T ss_pred CcHHHHHHHHH--HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhh
Confidence 9999997 66 334455 7 599999999999999999999999999998642 6999999999963
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHH-HhcCCeEEEecCCCCCcCCC-CCCchhHHHHH---HhcCCeEEEEE
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVI-QEKNHIPFFDVAYQGFASGS-LDNDASSVRLF---ATRGMELLVAQ 300 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~-~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~---~~~~~~vi~~~ 300 (363)
.++...++++++||||||.+++.+++++|+++| +++|+++|+||+|..+.+.+ ......++..+ .+..+++++++
T Consensus 170 ~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 249 (423)
T 3ez1_A 170 DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFA 249 (423)
T ss_dssp CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEE
T ss_pred CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEe
Confidence 233333445679999999999999999999999 99999999999999765543 11112223222 24568999999
Q ss_pred cCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 301 S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
||||. +++|+|+||+ +++ ++ +++.+.........+++.++|.++..+|+.
T Consensus 250 S~sK~-~~~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 250 STSKI-TFAGAGLGFV--ASS-ED----NIRWLSKYLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp ESTTT-SCSSSSCEEE--EEC-HH----HHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred Cchhh-ccCCcceEEE--EeC-HH----HHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence 99998 5799999999 766 66 566666666666778999999999887765
No 67
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.97 E-value=6.6e-31 Score=250.08 Aligned_cols=241 Identities=20% Similarity=0.141 Sum_probs=192.2
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+++|+|+.|++. ..+++.+.+++.+........+|++ .|..++|+++++++.. . ++++|++ |+|++
T Consensus 29 ~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~----~-~~~~i~~--~~g~t 95 (367)
T 3euc_A 29 SHGLVKLDAMENP-----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQV----P-AGMEVLL--GNGSD 95 (367)
T ss_dssp CTTCEECCSSCCC-----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTC----C-TTCEEEE--EEHHH
T ss_pred CCCeeEccCCCCC-----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCC----C-CcceEEE--cCCHH
Confidence 3479999998852 1245677777766554212256754 6899999999999733 1 3679988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++++++ +..++.+||+|+++.|+|..+...++..|++++.++++ .++++|++.+++++++. +++++++++||||
T Consensus 96 ~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~np 169 (367)
T 3euc_A 96 EIISML--ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLR--ADFTLDRGAMLAAMAEH--QPAIVYLAYPNNP 169 (367)
T ss_dssp HHHHHH--HHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECC--TTSCCCHHHHHHHHHHH--CCSEEEEESSCTT
T ss_pred HHHHHH--HHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHHHhhcc--CCCEEEEcCCCCC
Confidence 999988 44446799999999999999999999999999999984 36789999999999841 3557777899999
Q ss_pred CCCCCCHHHHHHHHHHHHhc--CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEe
Q 017967 242 TGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||.+++.+++++|+++|+++ |+++|+||+|.+|...+. .. ..+..++++++.||||. +++|+|+||+ +
T Consensus 170 tG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~---~~----~~~~~~~~i~~~s~sK~-~~~G~r~G~~--~ 239 (367)
T 3euc_A 170 TGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW---MS----RLTDFGNLLVMRTVSKL-GLAGIRLGYV--A 239 (367)
T ss_dssp TCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS---GG----GGGTCTTEEEEEECCCT-TSCSCCEEEE--E
T ss_pred CCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch---HH----HHhhCCCEEEEecchhh-cccccCceee--e
Confidence 99999999999999999999 999999999999875421 11 23456789999999999 8999999999 6
Q ss_pred eCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 320 CSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ ++ +++.+..... .++++.++|.++..+|+.
T Consensus 240 ~~-~~----~~~~~~~~~~--~~~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 240 GD-PQ----WLEQLDKVRP--PYNVNVLTEATALFALEH 271 (367)
T ss_dssp EC-HH----HHHHHGGGCC--SSCCCHHHHHHHHHHHTT
T ss_pred eC-HH----HHHHHHHhCC--CCCCCHHHHHHHHHHhcC
Confidence 64 66 5666665533 357899999999888876
No 68
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.97 E-value=6.3e-31 Score=249.85 Aligned_cols=240 Identities=15% Similarity=0.150 Sum_probs=190.4
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+++|+|+.|++. ..+++.+.+++.+.... ...| +..+..++|+++++++. +++++|++ |+||+
T Consensus 31 ~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~------~~~~~v~~--~~g~t 94 (363)
T 3ffh_A 31 LTKITKLSSNENP-----LGTSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFYQ------LEEEELIF--TAGVD 94 (363)
T ss_dssp CSCCEECSSCSCT-----TCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHHT------CCGGGEEE--ESSHH
T ss_pred CCceEEccCCCCC-----CCCCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHhC------CChhhEEE--eCCHH
Confidence 3589999998752 22467888887665432 2456 66789999999999974 23689988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++++++. ..++.+||+|+++.|+|..+...++..|++++.++.+ .++.+|++.+++.++ ++++++++++||||
T Consensus 95 ~a~~~~~--~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~---~~~~~v~~~~p~np 167 (363)
T 3ffh_A 95 ELIELLT--RVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL--QDGEHDLEGMLNAID---EKTTIVWICNPNNP 167 (363)
T ss_dssp HHHHHHH--HHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC--TTSCCCHHHHHHHCC---TTEEEEEEESSCTT
T ss_pred HHHHHHH--HHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--CCCCcCHHHHHHhcc---cCCCEEEEeCCCCC
Confidence 9999983 4446799999999999999999999999999999984 368899999999886 35778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++.+|++.|++ |+++|+||+|.++.++ . ..+........++++++.||||.+|++|+|+||+ ++
T Consensus 168 tG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~~-~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~--~~- 239 (363)
T 3ffh_A 168 TGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVTP-Q---PEKHEKLVRTYKNLIITRTFSKIYGLASARVGYG--IA- 239 (363)
T ss_dssp TCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCSS-C---CCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEE--EE-
T ss_pred cCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcCc-c---ccCHHHHhhcCCCEEEEeechhhhcCchhceeee--ec-
Confidence 9999999999999998887 9999999999988762 1 1122222345689999999999999999999999 66
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++ +++.+..... .++++.++|.++...|+.
T Consensus 240 ~~~----~~~~l~~~~~--~~~~~~~~~~~~~~~l~~ 270 (363)
T 3ffh_A 240 DKE----IIRQLNIVRP--PFNTTSIGQKLAIEAIKD 270 (363)
T ss_dssp CHH----HHHHHHHTCC--SCCCBHHHHHHHHHHHHC
T ss_pred CHH----HHHHHHHhCC--CCCCCHHHHHHHHHHhcC
Confidence 477 5666665543 457899999999887764
No 69
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=6.9e-32 Score=263.58 Aligned_cols=273 Identities=16% Similarity=0.118 Sum_probs=201.8
Q ss_pred CCchhhHHHHH-hcCCCCCcE-EeeccccCCCCCCccccHHHHHHHHHHHcc-------C----CCCCCCCCcchHHHHH
Q 017967 67 PDPILGVSEAF-KADTDEKKL-NLGVGAYRTEELQPYVLDVVKKAENLMLER-------G----ENKEYLPIEGLAAFNK 133 (363)
Q Consensus 67 ~~~~~~~~~~~-~~~~~~~~i-~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-------~----~~~~Y~~~~G~~~lr~ 133 (363)
+.++..+.... +...++++| +|+.|.|. ..+.+.+.+.+++.+.... . ...+|.+..|.++||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~ 90 (444)
T 3if2_A 14 PTGISQLMDDLGDALKSDQPVNMLGGGNPA---KIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFID 90 (444)
T ss_dssp CCHHHHHHHHHHHHHHSSSCCEECSCCCCC---CCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHH
T ss_pred chhHHHHHHHHHhhhcCchhhhccCCCCCC---cccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHH
Confidence 44555544333 222336899 99999873 2344446777777666533 1 1257999999999999
Q ss_pred HHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCC--------------EEEEc-CCCCcchHH------
Q 017967 134 VTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA--------------KVLIS-SPTWGNHKN------ 192 (363)
Q Consensus 134 aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd--------------~Vlv~-~P~y~~~~~------ 192 (363)
++|+++...++..+++++|++ |+|++++++++ +..++.+|| .|+++ .|+|..+..
T Consensus 91 ~ia~~l~~~~g~~~~~~~i~~--t~G~t~al~~~--~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~ 166 (444)
T 3if2_A 91 ALVGFFNRHYDWNLTSENIAL--TNGSQNAFFYL--FNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQ 166 (444)
T ss_dssp HHHHHHHHHHCCCCCGGGEEE--ESSHHHHHHHH--HHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSC
T ss_pred HHHHHHHhhcCCCCCHHHEEE--ecCcHHHHHHH--HHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccc
Confidence 999999877777788999988 99999999998 344456887 78876 999999987
Q ss_pred HHhhCCCCeEEEecccCC---CCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEec
Q 017967 193 IFNDARVPWSEYRYYDPK---TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~---~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 269 (363)
.+...|.+++.+++++++ ++++|++.|++++....++++++++++||||||.+++.+++++|+++|+++|+++|+||
T Consensus 167 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De 246 (444)
T 3if2_A 167 HFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDN 246 (444)
T ss_dssp CEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 345678888888874311 35799999998843212457788889999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHH
Q 017967 270 AYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLL 349 (363)
Q Consensus 270 ~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q 349 (363)
+|..+.......+.. ....++++++.||||. +++|+|+||+ +++ ++ +++.+.........+++.++|
T Consensus 247 ~~~~~~~~~~~~~~~-----~~~~~~~i~~~S~sK~-~~~G~r~G~~--~~~-~~----l~~~~~~~~~~~~~~~~~~~~ 313 (444)
T 3if2_A 247 AYGMPFPNIIYSDAH-----LNWDNNTILCFSLSKI-GLPGMRTGII--VAD-AK----VIEAVSAMNAVVNLAPTRFGA 313 (444)
T ss_dssp TTCTTTTCCBCSCCC-----CCCCTTEEEEEESTTT-TCGGGCCEEE--ECC-HH----HHHHHHHHHHHHHSSCCCHHH
T ss_pred CCCCccccccccccc-----ccCCCCEEEEechhhc-cCCCCceEEE--EEC-HH----HHHHHHHHHHhccCCCChHHH
Confidence 998643211000000 1234789999999996 7899999999 654 66 555565555555668889999
Q ss_pred HHHhcccccc
Q 017967 350 GIQLSSMNGK 359 (363)
Q Consensus 350 ~~~~~~l~~~ 359 (363)
.++..+++..
T Consensus 314 ~a~~~~l~~~ 323 (444)
T 3if2_A 314 AIATPLVAND 323 (444)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHcC
Confidence 9888777653
No 70
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.97 E-value=9.4e-31 Score=248.69 Aligned_cols=229 Identities=17% Similarity=0.191 Sum_probs=180.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++|+|+.|++. .+++ +.+ + . . ...+|++. +..++|+++|+++. +++++|++ |+|++++
T Consensus 30 ~~i~l~~~~~~--~~~~---~~v--a----~-~-~~~~Y~~~-~~~~lr~~la~~~~------~~~~~v~~--~~G~~~a 87 (356)
T 1fg7_A 30 GDVWLNANEYP--TAVE---FQL--T----Q-Q-TLNRYPEC-QPKAVIENYAQYAG------VKPEQVLV--SRGADEG 87 (356)
T ss_dssp CSEECSSCCCS--SCCC---CCC--C----C-C-CTTSCCCS-SCHHHHHHHHHHHT------SCGGGEEE--ESHHHHH
T ss_pred ceEEeeCCCCC--CCCC---HhH--h----h-h-hhccCCCc-cHHHHHHHHHHHhC------CChHHEEE--cCCHHHH
Confidence 68999999863 1221 222 1 1 1 23678654 58999999999972 23689988 9999999
Q ss_pred HHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 164 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 164 l~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++++. ..++.+| |+|+++.|+|..+...++..|++++.+|++ +++++|++.+++.++ +++++++++|||||
T Consensus 88 i~~~~--~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~----~~~~v~l~~p~npt 159 (356)
T 1fg7_A 88 IELLI--RAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD----GVKVVYVCSPNNPT 159 (356)
T ss_dssp HHHHH--HHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT----TEEEEEEESSCTTT
T ss_pred HHHHH--HHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc----CCCEEEEeCCCCCC
Confidence 99883 4446799 999999999999999999999999999884 457899999988764 35677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++|+ +|+++|+||+|.++... . +...+.+..+++++++||||.||++|+|+||+ +++
T Consensus 160 G~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~---~---~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~--~~~- 229 (356)
T 1fg7_A 160 GQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLAILRTLSKAFALAGLRCGFT--LAN- 229 (356)
T ss_dssp CCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG---G---CSGGGTTTCTTEEEEEESSSTTCCGGGCCEEE--EEC-
T ss_pred CCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC---C---cHHHHHhhCCCEEEEecchHhhcCchhhhEEE--EeC-
Confidence 99999999999999999 99999999999988621 1 11122244578999999999999999999999 664
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+..... . ++++.++|.++..+|++
T Consensus 230 ~~----~~~~l~~~~~-~-~~~~~~~~~a~~~~l~~ 259 (356)
T 1fg7_A 230 EE----VINLLMKVIA-P-YPLSTPVADIAAQALSP 259 (356)
T ss_dssp HH----HHHHHHHHSC-S-SCSCHHHHHHHHHHTSH
T ss_pred HH----HHHHHHHhcC-C-CCCCHHHHHHHHHHhcC
Confidence 66 5566665533 2 37899999999888765
No 71
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=1.9e-30 Score=246.87 Aligned_cols=254 Identities=14% Similarity=0.114 Sum_probs=190.8
Q ss_pred CCchhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCc
Q 017967 67 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 146 (363)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~ 146 (363)
+..+.++...+..++ .++|+|+.|.+. ..+++.+.+++.+.... ..+|++ .|..++|+++++++.
T Consensus 9 g~~~~~~~~~~~~~~-~~~idl~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~~------ 73 (364)
T 1lc5_A 9 GGNIREPATVLGISP-DQLLDFSANINP-----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHHQ------ 73 (364)
T ss_dssp SCCCHHHHHHHTSCG-GGSEECSSCCCT-----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHHT------
T ss_pred CccHHHHHHhcCCCc-cceEEeccccCC-----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHHC------
Confidence 344555555555443 368999998752 11457777877766533 256854 589999999999973
Q ss_pred ccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC
Q 017967 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (363)
+++++|++ |+|++++++++... + +||+|+++.|+|..+...++..|.+++.+|.++++++.+ ++.+.+.+.
T Consensus 74 ~~~~~v~~--~~g~~~al~~~~~~---~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~-- 144 (364)
T 1lc5_A 74 VPASWILA--GNGETESIFTVASG---L-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALT-- 144 (364)
T ss_dssp SCGGGEEE--ESSHHHHHHHHHHH---H-CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCC--
T ss_pred cCHHHEEE--CCCHHHHHHHHHHH---c-CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhcc--
Confidence 23678988 99999999988433 3 789999999999999999999999999999853223333 455555443
Q ss_pred CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++.. ... .+.+..++++++.||||.+
T Consensus 145 -~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~---~~~~~~~~~i~~~s~sK~~ 218 (364)
T 1lc5_A 145 -PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHET--GFI---PALKDNPHIWVLRSLTKFY 218 (364)
T ss_dssp -TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCC--CSG---GGCTTCTTEEEEEESTTTT
T ss_pred -CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCcc--chh---hHhccCCCEEEEEECchhh
Confidence 3455777899999999999999999999999999999999999999876421 111 1123456899999999999
Q ss_pred ccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|++|+|+||+ ++.+++ +++.+..... ..+++.++|.++..+|+.
T Consensus 219 ~~~G~r~G~~--~~~~~~----~~~~l~~~~~--~~~~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 219 AIPGLRLGYL--VNSDDA----AMARMRRQQM--PWSVNALAALAGEVALQD 262 (364)
T ss_dssp TCTTTCCEEE--ECCCHH----HHHHHHHHSC--TTCSCHHHHHHHHHGGGC
T ss_pred cCCccceEEE--EECCHH----HHHHHHHhCC--CCCCCHHHHHHHHHHHhC
Confidence 9999999999 634577 5555555433 347899999999888876
No 72
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.97 E-value=9.3e-32 Score=269.09 Aligned_cols=245 Identities=15% Similarity=0.097 Sum_probs=189.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC-CCcchHHHHHHHHHHHhcC-CC-Cccc-CCcEEEEeccc
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGA-DN-SVLK-EQRVATVQGLS 159 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~l~~~-~~-~~~~-~~~i~~~~t~g 159 (363)
++|+|++|.|.. + +++.+.++...+. . .+|+ +..|.+++|+++++++... .+ ..+. +++|++ |.|
T Consensus 104 ~~i~l~~g~~~~----~-~~~~v~a~~~~~~-~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~--t~G 172 (533)
T 3f6t_A 104 DAVNYCHTELGL----N-RDKVVAEWVNGAV-A---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFP--TEG 172 (533)
T ss_dssp HHHHHHHHTTCC----C-HHHHHHHHHHHHH-T---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEE--EEH
T ss_pred hheeccCCCCCc----C-CcHHHHHHHHHHH-h---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEE--ECC
Confidence 368999998731 1 2344444443333 2 3455 7889999999999998544 23 3444 468988 999
Q ss_pred hhHHHHHHHHHHH---HhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEeccc--CCCCCCCHHHHHHHHHcCCCCcEEEE
Q 017967 160 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAAPGGSFILL 234 (363)
Q Consensus 160 gt~al~l~~~l~~---~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~--~~~~~~d~~~l~~~l~~~~~~~~~~~ 234 (363)
+++++.++...+. ++.+||+|+++.|+|..+...++..|.+++.++++. +.++++|++.+++++. +++++++
T Consensus 173 ~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~---~~~k~v~ 249 (533)
T 3f6t_A 173 GTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD---PSIKALI 249 (533)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC---TTEEEEE
T ss_pred HHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC---CCCeEEE
Confidence 9999998843211 467999999999999999999999999999998854 4568999999999876 3567777
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHH-hcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccc
Q 017967 235 HGCAHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 313 (363)
Q Consensus 235 i~~p~NPTG~~~s~~~~~~i~~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv 313 (363)
+++||||||.+++.+++++|+++|+ ++|+++|+||+|.++.++. .++... ..+++++++||||.||++|+|+
T Consensus 250 l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~-----~~~~~~--~~~~~i~~~S~SK~~g~~G~Ri 322 (533)
T 3f6t_A 250 VVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF-----KSIYSV--VPYNTMLVYSYSKLFGCTGWRL 322 (533)
T ss_dssp EESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC-----CCHHHH--SGGGEEEEEESHHHHTCGGGCE
T ss_pred EeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc-----cCHhhc--CCCCEEEEecCcccCCCcccce
Confidence 8899999999999999999999999 6899999999999988752 122222 2468999999999999999999
Q ss_pred eEEEEeeCChhHHHHHHHHH--------------------------------HhhhccccCCCchHHHHH
Q 017967 314 GAMNVVCSSSDLAARVKSQL--------------------------------KRLARPMYSNPPPMLLGI 351 (363)
Q Consensus 314 G~i~~v~~~~~~~~~~~~~l--------------------------------~~~~~~~~~~~s~~~q~~ 351 (363)
||+ ++++++.++++++.+ +........+++.+.|.+
T Consensus 323 G~l--~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a 390 (533)
T 3f6t_A 323 GVI--ALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIM 390 (533)
T ss_dssp EEE--EEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHH
T ss_pred EEE--EECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHH
Confidence 999 777665555554432 445556677889999988
No 73
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.95 E-value=2.7e-33 Score=269.34 Aligned_cols=258 Identities=16% Similarity=0.082 Sum_probs=198.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+++++|+.|.+ +.. .++.+.+++.+.+.... .+|.+. ..++|+++++++...++..+++++|++ |+|+++
T Consensus 31 ~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--~~g~~~ 100 (392)
T 3b1d_A 31 PQLLPAWIADM-DFE----VMPEVKQAIHDYAEQLV-YGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVF--VEGVVP 100 (392)
Confidence 37899999986 222 24556666555443322 567654 889999999998877776677889988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCC-CCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++.++. ..++.+||+|+++.|+|..+...++..|.+++.+++++++ ++.+|++.+++.+++ .+++++++++||||
T Consensus 101 a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~np 176 (392)
T 3b1d_A 101 AISIAI--QAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE--NDVKLYLLCNPHNP 176 (392)
Confidence 999884 3346799999999999999999999999999999884322 356899999998863 23456777999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccceEEEEee
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+... .++++++.||||.+|++|+|+||+ ++
T Consensus 177 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~ 252 (392)
T 3b1d_A 177 GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGH--EHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYA--II 252 (392)
Confidence 99999999999999999999999999999999987531 12233333221 578999999999999999999999 77
Q ss_pred CChhHHHHHHHHHHhhhccc-cCCCchHHHHHHhccccccccC
Q 017967 321 SSSDLAARVKSQLKRLARPM-YSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~w 362 (363)
++++ +++.+....... +.+++.++|.++...|+..++|
T Consensus 253 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 291 (392)
T 3b1d_A 253 ENPT----LCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPW 291 (392)
Confidence 7666 455555554433 3467889999888888765555
No 74
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=2.1e-30 Score=245.75 Aligned_cols=236 Identities=16% Similarity=0.170 Sum_probs=188.1
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+++|||+.|.+. ..+++.+.+++.+.... ...| +..+..++|+++++++. +++++|++ |+||++
T Consensus 26 ~~~idl~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~--~~g~t~ 89 (361)
T 3ftb_A 26 RELLDYSSNINP-----LGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYLK------LKDIGIVL--GNGASE 89 (361)
T ss_dssp --CEETTCCCCT-----TCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHHT------CCSCEEEE--ESSHHH
T ss_pred CCEEEecCCCCC-----CCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHhC------CCcceEEE--cCCHHH
Confidence 479999999752 12456777777666543 2567 56788999999999973 23689988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
+++++.. .+ |+|+++.|+|..+...++..|++++.+++++ +.+++++.+++.+++ ++++++++|||||
T Consensus 90 al~~~~~---~~---d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~l~~----~~~v~i~~p~npt 157 (361)
T 3ftb_A 90 IIELSIS---LF---EKILIIVPSYAEYEINAKKHGVSVVFSYLDE--NMCIDYEDIISKIDD----VDSVIIGNPNNPN 157 (361)
T ss_dssp HHHHHHT---TC---SEEEEEESCCTHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHTTT----CSEEEEETTBTTT
T ss_pred HHHHHHH---Hc---CcEEEecCChHHHHHHHHHcCCeEEEeecCc--ccCCCHHHHHHhccC----CCEEEEeCCCCCC
Confidence 9988833 23 9999999999999999999999999999853 457788999998873 5577789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++++|+++|+++|+++|+||+|.++.++ .. .+........+++++++||||.+|++|+|+||+ ++.+
T Consensus 158 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~--~~~~ 231 (361)
T 3ftb_A 158 GGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PS---SSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYG--ITNN 231 (361)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TT---SSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEE--EESC
T ss_pred CCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cc---cchhHhcccCCCEEEEeeChhhcCCCCcceeEE--EeCC
Confidence 99999999999999999999999999999998875 11 122222345678999999999999999999999 6466
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.++.... .++++.++|.++...|+.
T Consensus 232 ~~----~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 261 (361)
T 3ftb_A 232 KE----IAAKIKAKQN--PWNINCFAEMAAINCLKD 261 (361)
T ss_dssp HH----HHHHHHTTSC--TTCSCHHHHHHHHHTSSC
T ss_pred HH----HHHHHHhhCC--CCCCCHHHHHHHHHHhcC
Confidence 77 6666665543 348899999999988875
No 75
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=6.9e-29 Score=233.09 Aligned_cols=230 Identities=17% Similarity=0.191 Sum_probs=180.6
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.+.|+|+.+++. ..+++.+.+++.+.... ..+| +..|..+||+++|+++.. ++++|++ |.|+++
T Consensus 16 ~~~i~l~~n~~~-----~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~~------~~~~i~~--t~G~~~ 79 (337)
T 3p1t_A 16 AQAVCLAFNENP-----EAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHFSC------PEDNLML--VRGIDE 79 (337)
T ss_dssp CCCEECSSCCCC-----SCCCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHHTS------CGGGEEE--ESHHHH
T ss_pred CCceEeeCCCCC-----CCCCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHhCc------CHHHEEE--eCCHHH
Confidence 378999988641 22467888887776543 2567 568999999999999732 3679988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++.++.. .+ +||+|+++.|+|..+...++..|++++.++++ +++++|++.+++. .+++++++++|||||
T Consensus 80 ~l~~~~~---~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~-----~~~~~v~i~~p~npt 148 (337)
T 3p1t_A 80 CFDRISA---EF-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV-----SRDDCVVLANPSNPT 148 (337)
T ss_dssp HHHHHHH---HS-TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC-----CTTEEEEEESSCTTT
T ss_pred HHHHHHH---hc-CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh-----cCCCEEEEeCCCCCC
Confidence 9988833 33 99999999999999999999999999999984 4688999998764 246788899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++.+++.+| |+++++ +|+||+|.+|...... . ....+++++++||||.||++|+|+||+ +++
T Consensus 149 G~~~~~~~l~~l---~~~~~~-~ivDea~~~~~~~~~~----~----~~~~~~~i~~~S~sK~~g~~G~r~G~~--~~~- 213 (337)
T 3p1t_A 149 GQALSAGELDQL---RQRAGK-LLIDETYVDYSSFRAR----G----LAYGENELVFRSFSKSYGLAGLRLGAL--FGP- 213 (337)
T ss_dssp CCCCCHHHHHHH---HHHCSE-EEEECTTGGGSSCSSS----C----CCCBTTEEEEEESSSTTCCTTTCCEEE--ECC-
T ss_pred CCCCCHHHHHHH---HHhCCc-EEEECCChhhcccccc----c----cccCCCEEEEeeCchhccCcchheEEE--EeC-
Confidence 999999988777 566776 5669999988754311 0 123468899999999999999999999 665
Q ss_pred hhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 323 SDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
++ +++.++... ...+++.++|.++..+|+..+
T Consensus 214 ~~----~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~ 245 (337)
T 3p1t_A 214 SE----LIAAMKRKQ--WFCNVGTLDLHALEAALDNDR 245 (337)
T ss_dssp HH----HHHHHHTTS--CTTCSCHHHHHHHHHHHTCHH
T ss_pred HH----HHHHHHhhc--CCCCCCHHHHHHHHHHhCCHH
Confidence 66 556665543 345788999999988877643
No 76
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.96 E-value=4e-29 Score=238.27 Aligned_cols=242 Identities=14% Similarity=0.153 Sum_probs=185.1
Q ss_pred cEEeeccccCCCCCCccccHHHHHHHHHHHcc--CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.|||+.|.+. . ..++.+.+++.+.+.. ....+|++..+ .++|+++++++...++..+++++|++ |.|+++
T Consensus 32 ~idl~~~~~~-~----~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~--~~G~~~ 103 (369)
T 3cq5_A 32 DIRLNTNENP-Y----PPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWA--ANGSNE 103 (369)
T ss_dssp SEECSSCCCC-S----CCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEE--ESHHHH
T ss_pred ceeccCCCCC-C----CCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEE--CCChHH
Confidence 4999998862 1 1345666666554422 11267876666 79999999998766565667889988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
+++++. ..++.+||+|+++.|+|..+...++..|++++.+|.+ +++++|++.+++.+++. +++++++++|||||
T Consensus 104 al~~~~--~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~v~~~~~~npt 177 (369)
T 3cq5_A 104 ILQQLL--QAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAK--QPDIVFVTTPNNPT 177 (369)
T ss_dssp HHHHHH--HHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHH--CCSEEEEESSCTTT
T ss_pred HHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhcc--CCCEEEEeCCCCCC
Confidence 998883 4446799999999999999999999999999999973 45789999999998741 34466679999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC-eEEEEEcCccccccccccceEEEEeeC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
|.+++.+++.+|++ .+++++|+||+|.++.++ . +...+.+..+ +++++.||||.+|++|+|+||+ +++
T Consensus 178 G~~~~~~~l~~l~~---~~~~~li~De~~~~~~~~---~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~--~~~ 246 (369)
T 3cq5_A 178 GDVTSLDDVERIIN---VAPGIVIVDEAYAEFSPS---P---SATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYF--VAN 246 (369)
T ss_dssp CCCCCHHHHHHHHH---HCSSEEEEECTTGGGCCS---C---CGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEE--EEC
T ss_pred CCCCCHHHHHHHHH---hCCCEEEEECCchhhcCC---c---chHHHHhhCCCCEEEEEechHhcCCcccceEEE--EeC
Confidence 99999988888755 456999999999988753 1 1111223345 8999999999999999999999 776
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ +++.+..... .++++.++|.++...|+.
T Consensus 247 -~~----~~~~l~~~~~--~~~~~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 247 -PA----FIDAVMLVRL--PYHLSALSQAAAIVALRH 276 (369)
T ss_dssp -TH----HHHHHHTTSC--TTCSCHHHHHHHHHHHHT
T ss_pred -HH----HHHHHHHcCC--CCCCCHHHHHHHHHHhcC
Confidence 55 5666665443 346899999988887764
No 77
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.96 E-value=4.7e-30 Score=247.14 Aligned_cols=231 Identities=15% Similarity=0.114 Sum_probs=169.8
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHH--cc-CCCCCCCCCcch-----HHHHHHHHHHHhcCCCCcccC-CcE
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLML--ER-GENKEYLPIEGL-----AAFNKVTAELLFGADNSVLKE-QRV 152 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~-~~~~~Y~~~~G~-----~~lr~aia~~l~~~~~~~~~~-~~i 152 (363)
.+++|+|+.|.+. ...++.+.++..... .. ....+|++..|. ++||+++|+++. .++..+.+ ++|
T Consensus 21 ~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i 94 (391)
T 3bwn_A 21 SDFVVNLDHGDPT-----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI 94 (391)
T ss_dssp TTSCEECSSCCCG-----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred CCCeeEcCCCCCC-----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence 3478999999862 122344554432211 11 123679999998 999999999986 55677766 589
Q ss_pred EEEeccchhHHHHHHHHHHHHhCCCC----EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC
Q 017967 153 ATVQGLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 153 ~~~~t~ggt~al~l~~~l~~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (363)
++ |+|+++++.++. ..++.+|| +|++++|+|..|...++..|++++.++++.+ ++. . +
T Consensus 95 ~~--t~G~~~al~~~~--~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~---~l~--------~---~ 156 (391)
T 3bwn_A 95 VV--GTGSTQLCQAAV--HALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW---GFD--------K---K 156 (391)
T ss_dssp EE--EEHHHHHHHHHH--HHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST---TCC--------C---C
T ss_pred EE--eCChHHHHHHHH--HHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH---HcC--------C---C
Confidence 88 999999999984 44467999 9999999999999999999999999988532 222 1 2
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC--CeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN--HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~--~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
+++++++++||||||.+++ +|++ ++++ ++||+||+|.+ +. ..++ ....+++++++||||.|
T Consensus 157 ~~k~v~l~~p~NPtG~~~~-----~l~~--~~~~~~~~ii~De~y~~---~~----~~~l---~~~~~~~i~~~S~SK~~ 219 (391)
T 3bwn_A 157 GPYIELVTSPNNPDGTIRE-----TVVN--RPDDDEAKVIHDFAYYW---PH----YTPI---TRRQDHDIMLFTFSKIT 219 (391)
T ss_dssp SCEEEEEESSCTTTCCCCC-----CCC-------CCCEEEEECTTCS---TT----TSCC---CCCBCCSEEEEEHHHHH
T ss_pred CCEEEEECCCCCCCchhHH-----HHHH--HhhcCCCEEEEeCCCCC---CC----CCcc---ccCCCCeEEEEechhhc
Confidence 4667778999999999997 3444 2255 99999999974 11 0111 11347899999999999
Q ss_pred ccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccccc
Q 017967 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
|++|+|+||+ ++++++ +++++.........+++.++|.++..+|+..
T Consensus 220 g~~GlRiG~~--~~~~~~----l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~ 266 (391)
T 3bwn_A 220 GHAGSRIGWA--LVKDKE----VAKKMVEYIIVNSIGVSKESQVRTAKILNVL 266 (391)
T ss_dssp SCGGGCEEEE--EECCHH----HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCCccceEEE--EecCHH----HHHHHHHHhcccccCCCHHHHHHHHHHHhCc
Confidence 9999999999 765577 5566665555455789999999999988764
No 78
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.96 E-value=7e-29 Score=234.67 Aligned_cols=231 Identities=13% Similarity=0.123 Sum_probs=180.3
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|||+.|.+. ..+++.+.+++.+.... ...|++..+ .++|+++|+++. +++++|++ |+|+++
T Consensus 15 ~~~id~~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~--t~g~~~ 78 (350)
T 3fkd_A 15 SEIVNFSTTVWT-----DGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRNS------VDNNAILV--TNGPTA 78 (350)
T ss_dssp -CCEECSCCSCC-----CSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHTT------CCGGGEEE--ESHHHH
T ss_pred ccEEEccCCCCC-----CCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHHH
Confidence 479999998752 22467777777665522 267877766 899999999963 34689988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec-ccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++.++... +. ||+|+++.|+|..+...++..|++++.+++ ++. .++++ ++++++++++||||
T Consensus 79 al~~~~~~---l~-gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~~-----------~~~~~v~i~~p~np 141 (350)
T 3fkd_A 79 AFYQIAQA---FR-GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDI--GEADF-----------SNMDFCWLCNPNNP 141 (350)
T ss_dssp HHHHHHHH---TT-TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCG--GGSCC-----------TTCSEEEEESSCTT
T ss_pred HHHHHHHH---HC-CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcc--ccCcc-----------CCCCEEEEeCCCCC
Confidence 99988433 33 999999999999999999999999999998 432 23443 23556777999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~ 321 (363)
||.+++.+++.+|++.|+++ ++|+||+|.++.+.+.. . . ...+..+++++++||||.+|++|+|+||+ ++
T Consensus 142 tG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~--~-~--~~~~~~~~~i~~~S~sK~~~~~G~r~G~~--~~- 211 (350)
T 3fkd_A 142 DGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVI--R-P--ADIKGRKNLVMVYSFSHAYGIPGLRIGYI--VA- 211 (350)
T ss_dssp TCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCC--C-G--GGGTTCSSEEEEEESHHHHSCGGGCCEEE--EC-
T ss_pred cCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcch--h-h--HHhhcCCCEEEEecCchhccCcchheEeE--Ee-
Confidence 99999999999998888765 99999999999876421 1 1 22345688999999999999999999999 66
Q ss_pred ChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccccC
Q 017967 322 SSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQRW 362 (363)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~w 362 (363)
+++ +++.+..... ..+++.++|.++..+|+..++|
T Consensus 212 ~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~ 246 (350)
T 3fkd_A 212 NKD----FMKRVAAFST--PWAVNALAIEAAKFILIHPAQF 246 (350)
T ss_dssp CHH----HHHHHHTTCC--TTCSCHHHHHHHHHHHHCTTTT
T ss_pred CHH----HHHHHHHhCC--CCCCCHHHHHHHHHHHhCHHHH
Confidence 577 6666665543 4588999999999988877666
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=6.7e-29 Score=235.84 Aligned_cols=232 Identities=14% Similarity=0.137 Sum_probs=178.4
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
+++|+|+.|++. ..+++.+.+++.+..... ....|++ .+..++|+++++++. +++++|++ |+||
T Consensus 26 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~g------~~~~~i~~--t~g~ 91 (360)
T 3hdo_A 26 ASWIKLNTNENP-----YPPSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELYG------FDPSWIIM--ANGS 91 (360)
T ss_dssp TTSEECSSCCCS-----SCCCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHHT------CCGGGEEE--ESSH
T ss_pred cceeeccCCCCC-----CCCCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHhC------cCcceEEE--cCCH
Confidence 379999999862 224678888887776442 1256744 467999999999973 34689988 9999
Q ss_pred hHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 161 t~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+++++++ +..++.+||+|+++.|+|..+...++..|++++.+++++ ++.+ +.+++.+ +++++++++|||
T Consensus 92 ~~al~~~--~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~-----~~~~v~i~~p~n 160 (360)
T 3hdo_A 92 DEVLNNL--IRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY-----EGKVFFLTTPNA 160 (360)
T ss_dssp HHHHHHH--HHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB-----CSSEEEEESSCT
T ss_pred HHHHHHH--HHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc-----CCCEEEEeCCCC
Confidence 9999998 444567999999999999999999999999999999842 3444 4443321 233777899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEee
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~ 320 (363)
|||.+++.+++.+| |+++|+++|+||+|.+|.... ... +.+..++++++.||||.+|++|+|+||+ ++
T Consensus 161 ptG~~~~~~~l~~l---~~~~~~~li~De~~~~~~~~~----~~~---~~~~~~~~i~~~s~sK~~g~~G~r~G~~--~~ 228 (360)
T 3hdo_A 161 PLGPSFPLEYIDEL---ARRCAGMLVLDETYAEFAESN----ALE---LVRRHENVVVTRTLSKSYSLAGMRIGLA--IA 228 (360)
T ss_dssp TTCCCCCHHHHHHH---HHHBSSEEEEECTTGGGSSCC----CTH---HHHHCSSEEEEEESTTTTSCTTSCCEEE--EC
T ss_pred CCCCCcCHHHHHHH---HHHCCCEEEEECChHhhCCcc----hhH---HhccCCCEEEEecchHhhcCCccceeeE--ee
Confidence 99999999887665 778999999999999874321 112 2345688999999999999999999999 66
Q ss_pred CChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 321 SSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+++ +++.+..... .++++.++|.++...|+.
T Consensus 229 -~~~----~~~~~~~~~~--~~~~~~~~~~a~~~~l~~ 259 (360)
T 3hdo_A 229 -RPE----VIAALDKIRD--HYNLDRLAQAACVAALRD 259 (360)
T ss_dssp -CHH----HHHHHHHHSC--SCCSCHHHHHHHHHHHHC
T ss_pred -CHH----HHHHHHHhCC--CCCCCHHHHHHHHHHhcC
Confidence 477 5666655543 357899999998887765
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.96 E-value=3.4e-29 Score=235.66 Aligned_cols=228 Identities=17% Similarity=0.144 Sum_probs=176.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
+.|+|+.|.+. ...++.+.+++.+.........|+. .+..++|+++++++... .+++++|++ |.|++++
T Consensus 20 ~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~--~~G~~~a 88 (335)
T 1uu1_A 20 DKTYLALNENP-----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSV--GNGADEI 88 (335)
T ss_dssp CSEEESSCCCS-----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEE--ESSHHHH
T ss_pred cceECCCCCCC-----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEE--cCChHHH
Confidence 68999998852 1246778888776652222256744 57999999999998643 345789988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
++++.. .+ ||+|+++ |+|..+...++..|++++.+|++ +++++|++.+ + +++++++++||||||
T Consensus 89 l~~~~~---~~--gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~---~~~~v~l~~p~nptG 152 (335)
T 1uu1_A 89 IYVMML---MF--DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----G---EGDVVFIPNPNNPTG 152 (335)
T ss_dssp HHHHHH---HS--SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----C---TTEEEEEESSCTTTC
T ss_pred HHHHHH---Hh--CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----C---CCCEEEEeCCCCCCC
Confidence 998843 23 8999999 99999999999999999999883 3567888877 1 356777799999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+++.+++++|+++| | ++|+||+|.++..++ ... +.+..+++++++||||.+|++|+|+||+ ++ ++
T Consensus 153 ~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~~----~~~---~~~~~~~~i~~~s~sK~~g~~G~r~G~~--~~-~~ 218 (335)
T 1uu1_A 153 HVFEREEIERILKTG---A-FVALDEAYYEFHGES----YVD---FLKKYENLAVIRTFSKAFSLAAQRVGYV--VA-SE 218 (335)
T ss_dssp CCCCHHHHHHHHHTT---C-EEEEECTTHHHHCCC----CGG---GGGTCSSEEEEEESTTTTTCGGGCCEEE--EE-CH
T ss_pred CCCCHHHHHHHHHhC---C-EEEEECcchhhcchh----HHH---HhhhCCCEEEEecchhhcCCcccCeEEE--Ee-CH
Confidence 999999999998877 7 899999999876431 111 1244578999999999999999999999 66 46
Q ss_pred hHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 324 DLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+ +++++..... .++++.++|.++..+|+.
T Consensus 219 ~----~~~~l~~~~~--~~~~~~~~~~~~~~~l~~ 247 (335)
T 1uu1_A 219 K----FIDAYNRVRL--PFNVSYVSQMFAKVALDH 247 (335)
T ss_dssp H----HHHHHHHHSC--TTCSCHHHHHHHHHHHHT
T ss_pred H----HHHHHHHhcC--CCCcCHHHHHHHHHHhCC
Confidence 6 5555555433 248899999999888765
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.95 E-value=3.1e-29 Score=244.28 Aligned_cols=231 Identities=14% Similarity=0.066 Sum_probs=175.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHc-cCC-CCCCCCCc-c---hHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-RGE-NKEYLPIE-G---LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~-~~~Y~~~~-G---~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
..|+|+.|+|. ...++.+.+++.+.+. .+. ...|.+.. | .++||+++|+++....+..+++++|++ |
T Consensus 57 ~~i~l~~g~~~-----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~--t 129 (427)
T 2hox_A 57 CSADVASGDGL-----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF--G 129 (427)
T ss_dssp CCEECCSCCCG-----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE--E
T ss_pred ceEEecCcCCC-----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEE--e
Confidence 78999999862 2234566666655542 222 13498888 9 999999999999876666677899988 9
Q ss_pred cchhHHHHHHHHHHHH--------hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 158 LSGTGSLRLAAALIER--------YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~--------~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
.|+++++.++ +..+ +.|||.|+++.|+|+.|...++..|++++.+ .+|++.|++.++ ++
T Consensus 130 ~G~~~al~~~--~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~---~~ 196 (427)
T 2hox_A 130 VGVTQLIHGL--VISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSN---PE 196 (427)
T ss_dssp SHHHHHHHHH--HHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSC---GG
T ss_pred CCHHHHHHHH--HHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhc---CC
Confidence 9999999998 4455 6799999999999999999999999998754 356777877665 24
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
+++++++|||||||.+++ +. ++ ++..+.|+.|.+ +. .++..+ . .+++|+++||||.+|++
T Consensus 197 ~k~v~l~~p~NPtG~~~~-~~-------l~--~~~~i~d~~~~~----~~----~s~~~~-~-~~~~i~~~S~SK~~g~~ 256 (427)
T 2hox_A 197 QYIEMVTSPNNPEGLLRH-AV-------IK--GCKSIYDMVYYW----PH----YTPIKY-K-ADEDILLFTMSKFTGHS 256 (427)
T ss_dssp GEEEEEESSCTTTCCCCC-CS-------ST--TCEEEEECTTCS----TT----TSCCCS-C-BCCSEEEEEHHHHTSCG
T ss_pred ceEEEEcCCCCCcccccH-HH-------Hc--CCCEEEeecccC----CC----CCcccc-C-CCceEEEEeChhcCCCC
Confidence 677888999999999999 42 22 566788888753 11 111111 1 47899999999999999
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccccc
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 360 (363)
|+|+||+ ++++++ +++++.........+++.++|.++..+|++.+
T Consensus 257 G~RiG~~--~~~~~~----l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~ 301 (427)
T 2hox_A 257 GSRFGWA--LIKDES----VYNNLLNYMTKNTEGTPRETQLRSLKVLKEVV 301 (427)
T ss_dssp GGCCEEE--EECCHH----HHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH
T ss_pred CceEEEE--EECCHH----HHHHHHHHHHhcCCCCCHHHHHHHHHHhhcch
Confidence 9999999 776677 56666666555567899999999988887643
No 82
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.94 E-value=1.1e-25 Score=217.64 Aligned_cols=228 Identities=12% Similarity=0.029 Sum_probs=176.6
Q ss_pred EEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchH---HHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLA---AFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~---~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++++|.| +...++++.+.+.++...+......+.|+. .|.+ ++++++++++.. +++++ +.||++
T Consensus 21 ~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g~--------~~~i~--~~~g~~ 88 (404)
T 1e5e_A 21 QFGAAIPP-IYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEKT--------EACVA--TSSGMG 88 (404)
T ss_dssp TTCCSSCC-CCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHH
T ss_pred CCCCcCCC-CcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhCC--------CcEEE--eCChHH
Confidence 46888887 667777788888777654332223366866 5666 899999999732 35655 788899
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
++.++ +..++.+||.|+++.|+|..+.. .++..|++++.++.+ |++.+++.++ ++++++++++|
T Consensus 89 ai~~~--~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~---~~t~~v~l~~p 156 (404)
T 1e5e_A 89 AIAAT--VLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMK---PNTKIVYFETP 156 (404)
T ss_dssp HHHHH--HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCC---TTEEEEEEESS
T ss_pred HHHHH--HHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcC---CCCcEEEEECC
Confidence 98888 44457899999999999999988 678899999999862 7789998886 35778889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh-cCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAM 316 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i 316 (363)
|||||.+++ +++|+++|++ +|+++|+||+|..+.+.. +. + .+.++++.|+||.|+++|+|+ ||+
T Consensus 157 ~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~------~~----~-~~~di~~~S~sK~~~~~g~ri~G~~ 222 (404)
T 1e5e_A 157 ANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN------PV----D-FGVDVVVHSATKYINGHTDVVAGLI 222 (404)
T ss_dssp CTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC------GG----G-GTCSEEEEETTTTTTCSSCCCCEEE
T ss_pred CCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC------cc----c-cCCEEEEEcCccccCCCCCCeEEEE
Confidence 999999996 7788888999 999999999999987641 11 1 257899999999999999998 999
Q ss_pred EEeeCChhHHHHHHH-HHHhhhccc-cCCCchHHHHHHhccccc
Q 017967 317 NVVCSSSDLAARVKS-QLKRLARPM-YSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 317 ~~v~~~~~~~~~~~~-~l~~~~~~~-~~~~s~~~q~~~~~~l~~ 358 (363)
+++ ++ +++ ++....... ..+.+.+.|.++...|+.
T Consensus 223 --~~~-~~----~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~ 259 (404)
T 1e5e_A 223 --CGK-AD----LLQQIRMVGIKDITGSVISPHDAWLITRGLST 259 (404)
T ss_dssp --EEC-HH----HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT
T ss_pred --EEC-HH----HHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH
Confidence 776 44 344 666655444 457888888888776654
No 83
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.93 E-value=5.6e-25 Score=211.43 Aligned_cols=239 Identities=15% Similarity=0.047 Sum_probs=170.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
++|+|+.|.|. + ..+++.+.+++.+.+.. . ....|....|..++++++++++....+. +++++ |.||+
T Consensus 44 ~~idl~~~~~~---~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~--~~ggt 113 (398)
T 3a2b_A 44 RVLMFGSNSYL---G-LTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAIL--FSTGF 113 (398)
T ss_dssp EEEECSCSCTT---C-GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEE--ESSHH
T ss_pred eEEEeeccccc---C-CCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEE--ECCHH
Confidence 68999998752 1 11456677776655432 1 1234555667777777777776554442 57877 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC-CcEEEEEcCCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG-GSFILLHGCAHN 240 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~~~~~~i~~p~N 240 (363)
+++.++ +..++.+||.|++++|+|..+...++..|.+++.++. +|++.+++.+++..+ +++++++++|||
T Consensus 114 ~a~~~~--~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~n 184 (398)
T 3a2b_A 114 QSNLGP--LSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFS 184 (398)
T ss_dssp HHHHHH--HHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCT
T ss_pred HHHHHH--HHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCC
Confidence 999988 4444679999999999999999999999999999875 589999999985322 567888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe-EEEEEcCccccccccccceEEEEe
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
|||.+++ +++|+++|+++|+++|+||+|..+.++.. ..++....+..++ +++++||||.++++| ||+ +
T Consensus 185 ptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~--~ 253 (398)
T 3a2b_A 185 MEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHK---GAGTASHFGLNDDVDLIMGTFSKSLASLG---GFV--A 253 (398)
T ss_dssp TTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG---GCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEE--E
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCCC---CCchHhhcCCCcCCeEEEecccccccCCC---cEE--E
Confidence 9999987 67788889999999999999998876421 1122222222235 699999999999878 999 6
Q ss_pred eCChhHHHHHHHHHHhh-hccccCCCchHHHHH-Hhcccc
Q 017967 320 CSSSDLAARVKSQLKRL-ARPMYSNPPPMLLGI-QLSSMN 357 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~-~~~~~~~~s~~~q~~-~~~~l~ 357 (363)
++ ++ +++.+... ......+.+.+.|.+ +...|+
T Consensus 254 ~~-~~----~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~ 288 (398)
T 3a2b_A 254 GD-AD----VIDFLKHNARSVMFSASMTPASVASTLKALE 288 (398)
T ss_dssp EC-HH----HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHH
T ss_pred eC-HH----HHHHHHHhcccceecCCCCHHHHHHHHHHHH
Confidence 65 66 44445443 222344556666663 444444
No 84
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.92 E-value=5e-24 Score=205.29 Aligned_cols=232 Identities=13% Similarity=0.082 Sum_probs=170.5
Q ss_pred EEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC--CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
..+++|.+ +...++++.+.+.+++.........+.|. +..+..++++++++++.. ++.++ +.+|++|
T Consensus 23 ~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--------~~~i~--~~sG~~a 91 (398)
T 2rfv_A 23 STGALSTP-IFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG--------EAGLA--TASGISA 91 (398)
T ss_dssp TTCCSSCC-CCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHH
T ss_pred CCCCcCCC-CcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHH
Confidence 36788886 66777888888887765322211123443 566788999999998632 24444 5677899
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
+.++ +..++.+||+|+++.|+|..+...+ +..|++++.++.. |++.+++.++ ++++++++++||
T Consensus 92 ~~~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~---~~~~~v~~~~~~ 159 (398)
T 2rfv_A 92 ITTT--LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMR---PETKVVYIETPA 159 (398)
T ss_dssp HHHH--HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCC---TTEEEEEEESSB
T ss_pred HHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcC---CCCeEEEEECCC
Confidence 8888 4444679999999999999988776 7889999999862 7899998886 357788889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEE
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNV 318 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~ 318 (363)
||||.+++ +++|.++|+++|+++|+||+|..+.+.. +. . ....+++.|+||.++.+|+|+ ||+
T Consensus 160 nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~------~~----~-~~~di~~~s~sK~~~~~g~~~~G~~-- 223 (398)
T 2rfv_A 160 NPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ------PL----Q-LGADIVVHSVTKYINGHGDVIGGII-- 223 (398)
T ss_dssp TTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC------GG----G-GTCSEEEEETTTTTTCSSCCCCEEE--
T ss_pred CCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC------ch----h-hCCcEEEEeCcccccCCCCceEEEE--
Confidence 99999996 7778888999999999999999776542 11 1 146789999999999899999 999
Q ss_pred eeCChhHHHHHHHHHHhhhccc-cCCCchHHHHHHhccccccc
Q 017967 319 VCSSSDLAARVKSQLKRLARPM-YSNPPPMLLGIQLSSMNGKQ 360 (363)
Q Consensus 319 v~~~~~~~~~~~~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~ 360 (363)
+++ ++.++ +.++...... ..+.+.+.|.++...|+..+
T Consensus 224 ~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 262 (398)
T 2rfv_A 224 VGK-QEFID---QARFVGLKDITGGCMSPFNAWLTLRGVKTLG 262 (398)
T ss_dssp EEC-HHHHH---HHHHTHHHHTTCCCCCHHHHHHHHHHHTTHH
T ss_pred EEC-HHHHH---HHHHHHHHhCCCCCCCHHHHHHHHhhhhhHH
Confidence 766 55322 1344333333 45778888888877776543
No 85
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.91 E-value=3.1e-23 Score=198.18 Aligned_cols=235 Identities=15% Similarity=0.092 Sum_probs=164.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CC-----CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.++||+.|.+. + ...++.+.+++.+.+.. .. .+.|+...+..++|+++++++. . ++.++ +
T Consensus 40 ~~id~~~~~~~---~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~------~~~i~---~ 105 (384)
T 1bs0_A 40 QYLNFSSNDYL---G-LSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG-Y------SRALL---F 105 (384)
T ss_dssp EEEECSCCCTT---S-GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT-C------SEEEE---E
T ss_pred eEEEeeccCcc---C-CCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC-C------CcEEE---e
Confidence 68999988641 1 12456777776665532 11 1223456789999999999972 1 24444 4
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
.+|++++.++ +..+..+||.|+++.|+|..+...++..|.+++.+|. .|++.+++.+++.+++++++++++
T Consensus 106 ~sGt~a~~~~--~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~ 176 (384)
T 1bs0_A 106 ISGFAANQAV--IAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEG 176 (384)
T ss_dssp SCHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEES
T ss_pred CCcHHHHHHH--HHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeC
Confidence 5558998887 3444679999999999999999999999999998874 478999999986433467888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
||||||.+++ +++|+++|+++|+++|+||+|..+.++. .........+. ...++++||||.++.+| ||+
T Consensus 177 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~- 245 (384)
T 1bs0_A 177 VFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGE---QGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAV- 245 (384)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSG---GGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEE-
T ss_pred CCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecC---CCCchHHhcCC-CCcEEEeeccchhhccC---cEE-
Confidence 9999999998 5678888999999999999998765431 01111122222 23489999999999777 999
Q ss_pred EeeCChhHHHHHHHHHHhhhcc--ccCCCchHHHHHHhccccc
Q 017967 318 VVCSSSDLAARVKSQLKRLARP--MYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~~~~~l~~ 358 (363)
+++ ++. ++.+...... ...+++.+.|.++...|+.
T Consensus 246 -~~~-~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~ 282 (384)
T 1bs0_A 246 -LCS-STV----ADYLLQFARHLIYSTSMPPAQAQALRASLAV 282 (384)
T ss_dssp -EEC-HHH----HHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH
T ss_pred -EeC-HHH----HHHHHHhchhhhcCCCCCHHHHHHHHHHHHH
Confidence 665 764 4444432211 1225778888776655543
No 86
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=1.2e-23 Score=199.70 Aligned_cols=205 Identities=13% Similarity=0.009 Sum_probs=152.4
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccC--------CCCCCCCCcchHHHHHH-HHHHHhcCCCCcccCCcEE
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--------ENKEYLPIEGLAAFNKV-TAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~Y~~~~G~~~lr~a-ia~~l~~~~~~~~~~~~i~ 153 (363)
++.+.|..|.+. ..+++.+.+++.+..... ....|.+..+..+++++ +++++.. + +|+
T Consensus 7 ~~~i~ld~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~-------~-~v~ 73 (371)
T 2e7j_A 7 KDFINIDPLQTG-----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC-------D-VAR 73 (371)
T ss_dssp -CCEECCHHHHT-----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS-------S-EEE
T ss_pred CCcEEecccccC-----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC-------C-EEE
Confidence 468888887642 234677777776655321 11345577899999999 9999632 2 777
Q ss_pred EEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEe--cccCCCCCCCHHHHHHHHHcCC--CC
Q 017967 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR--YYDPKTVGLDFEGMIADIKAAP--GG 229 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~--~~ 229 (363)
+ |.|+++|+.++. ..++.+||+|++++|+|..+...++..|++++.++ .+ .++++|++.+++.+++.. ++
T Consensus 74 ~--~~g~t~a~~~~~--~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~ 147 (371)
T 2e7j_A 74 V--TNGAREAKFAVM--HSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGE 147 (371)
T ss_dssp E--ESSHHHHHHHHH--HHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSC
T ss_pred E--eCChHHHHHHHH--HHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCC
Confidence 7 999999999884 44467999999999999999999999999999999 63 357899999999997421 24
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++||||||.+++. ++|.++|+++|+++|+||+|..+... . ++..+ +..+++.||||.++.
T Consensus 148 ~~~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~~~- 213 (371)
T 2e7j_A 148 VVLALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMP---V---SLKEI----GADFIVGSGHKSMAA- 213 (371)
T ss_dssp EEEEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBC---C---CHHHH----TCSEEEEEHHHHSSC-
T ss_pred eEEEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCC---C---Chhhc----CCCEEEecCCcCCCC-
Confidence 6788899999999999985 67778899999999999999886542 1 12222 234889999999984
Q ss_pred cccceEEEEeeCC
Q 017967 310 AERIGAMNVVCSS 322 (363)
Q Consensus 310 G~RvG~i~~v~~~ 322 (363)
|.|+||+ ++++
T Consensus 214 ~~~~G~~--~~~~ 224 (371)
T 2e7j_A 214 SGPIGVM--GMKE 224 (371)
T ss_dssp CSSCEEE--EECT
T ss_pred CCCcEEE--EEec
Confidence 5699999 7763
No 87
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.91 E-value=1.8e-23 Score=201.70 Aligned_cols=212 Identities=11% Similarity=0.037 Sum_probs=159.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC------CCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG------ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.|+|+.|.+. ..++.+.+++.+..... ....|++ ..+..++|+++++++... +++++++
T Consensus 28 ~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~- 95 (420)
T 1t3i_A 28 PLVYLDNAATS------QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-----SPREIVY- 95 (420)
T ss_dssp ECEECBTTTCC------CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred ceEEecCCccC------CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence 47999998862 24567777776655321 1134543 467899999999996442 3578988
Q ss_pred eccchhHHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.||++|++++...+. .+.+||+|+++.|+|.. +...++..|++++.++.+ +++.+|++.++++++ ++
T Consensus 96 -~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~---~~ 169 (420)
T 1t3i_A 96 -TRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLS---EK 169 (420)
T ss_dssp -ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCC---TT
T ss_pred -cCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhC---CC
Confidence 9999999999843321 05799999999999998 566777889999999984 457799999999886 35
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++|+||||.+++ +++|.++|+++|+++|+|++|...... . ....+ ...+++.||||.+|.+
T Consensus 170 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~~~~ 236 (420)
T 1t3i_A 170 TKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---L---DVQLI----DCDWLVASGHKMCAPT 236 (420)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHHH----TCSEEEEEGGGTTSCT
T ss_pred ceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---C---chhhc----CCCEEEEehhhhcCCC
Confidence 678888999999999998 677888899999999999999865432 0 12222 3568899999999877
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHh
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKR 335 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~ 335 (363)
| +||+ +++ ++ +++.+..
T Consensus 237 g--~G~~--~~~-~~----~~~~~~~ 253 (420)
T 1t3i_A 237 G--IGFL--YGK-EE----ILEAMPP 253 (420)
T ss_dssp T--CEEE--EEC-HH----HHHHSCC
T ss_pred c--eEEE--EEc-hH----HHhhcCc
Confidence 7 8999 665 66 4554443
No 88
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.90 E-value=5.9e-24 Score=202.46 Aligned_cols=226 Identities=10% Similarity=-0.017 Sum_probs=160.7
Q ss_pred ccccHHHHHHHHHHHccCC-------CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHH
Q 017967 100 PYVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 172 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~-------~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~ 172 (363)
..+++.+.+++.+...... ...|....+..++++++++++. +++++|++ |+||++++.++...+.
T Consensus 11 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~--~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 11 TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG------VSPSEIFF--TSCATESINWILKTVA 82 (384)
T ss_dssp CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------SCGGGEEE--ESCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC------CCCCeEEE--ECCHHHHHHHHHHhhh
Confidence 4567788888777664311 0112334567899999999973 23578988 9999999999854432
Q ss_pred H--hCCCCEEEEcCCCCcchHHHH---hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCC
Q 017967 173 R--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (363)
Q Consensus 173 ~--~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s 247 (363)
. ..+||+|+++.|+|..+...+ +..|++++.++.+ .++.+|++.|++.+++ +++++++++|+||||.+++
T Consensus 83 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~ 157 (384)
T 1eg5_A 83 ETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD--SRGVVKLEELEKLVDE---DTFLVSIMAANNEVGTIQP 157 (384)
T ss_dssp HHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC--TTSCBCHHHHHHHCCT---TEEEEEEESBCTTTCBBCC
T ss_pred hhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC--CCCccCHHHHHHHhCC---CCeEEEEECCCCCcccccC
Confidence 1 169999999999999886655 6789999999984 3577999999998863 5678888999999999999
Q ss_pred HHHHHHHHHHHHhcC--CeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhH
Q 017967 248 PEQWEKIADVIQEKN--HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~--~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~ 325 (363)
+++|.++|+++| +++|+||+|. +.... . .+ ......+++.|+||.+|++| +||+ ++++ +.
T Consensus 158 ---~~~i~~l~~~~~~~~~li~Dea~~-~~~~~--~---~~----~~~~~di~~~s~sK~~g~~G--~G~~--~~~~-~~ 219 (384)
T 1eg5_A 158 ---VEDVTRIVKKKNKETLVHVDAVQT-IGKIP--F---SL----EKLEVDYASFSAHKFHGPKG--VGIT--YIRK-GV 219 (384)
T ss_dssp ---HHHHHHHHHHHCTTCEEEEECTTT-TTTSC--C---CC----TTTCCSEEEEEGGGGTSCTT--CEEE--EECT-TS
T ss_pred ---HHHHHHHHHhcCCceEEEEEhhhh-cCCcc--c---Cc----hhcCCCEEEecHHHhcCCCc--eEEE--EEcC-CC
Confidence 466777899999 9999999987 32111 1 11 11246788999999999888 7999 7763 31
Q ss_pred HHHHHHHHHhh---hccccCCCchHHHHHHhccccc
Q 017967 326 AARVKSQLKRL---ARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 326 ~~~~~~~l~~~---~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++...+... ......+++.+.|.++...|+.
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 253 (384)
T 1eg5_A 220 --PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI 253 (384)
T ss_dssp --CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH
T ss_pred --ccccccccCcccccccCCCCChHHHHHHHHHHHH
Confidence 011111110 0123447888888887776654
No 89
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.90 E-value=5.6e-23 Score=196.00 Aligned_cols=232 Identities=15% Similarity=0.045 Sum_probs=163.5
Q ss_pred CCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCC
Q 017967 97 ELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 176 (363)
Q Consensus 97 ~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~ 176 (363)
.++..+++.+.+++.+.. ...|++ ...++++++++++....+.. +++++++ |.||++|+.++ +..++.+
T Consensus 26 ~~~~~~~~~v~~a~~~~~----~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~v~~--~~g~t~a~~~~--~~~l~~~ 94 (386)
T 2dr1_A 26 AGPVACFPEVLEIMKVQM----FSHRSK--EYRKVHMDTVERLREFLEVE-KGEVLLV--PSSGTGIMEAS--IRNGVSK 94 (386)
T ss_dssp SSSCCCCHHHHHHTTSCC----CCTTSH--HHHHHHHHHHHHHHHHHTCS-SSEEEEE--SSCHHHHHHHH--HHHHSCT
T ss_pred CCCcCCcHHHHHHHhccc----ccccCH--HHHHHHHHHHHHHHHHhCCC-CCcEEEE--eCChHHHHHHH--HHHhhcC
Confidence 344556777777754322 134643 23566666666655444443 3567877 99999999988 4444679
Q ss_pred CCEEEEcCCCCcc--hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 177 GAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 177 gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
||+|++++|+|.. +...++..|++++.++.+ .++.+|++.|++++++.+ +++++++++|+||||.+.+ +++|
T Consensus 95 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~nptG~~~~---l~~i 168 (386)
T 2dr1_A 95 GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYE--PGKAVKPEDLDDALRKNP-DVEAVTITYNETSTGVLNP---LPEL 168 (386)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHCT-TCCEEEEESEETTTTEECC---HHHH
T ss_pred CCeEEEEcCCchhHHHHHHHHHhCCceEEEecC--CCCCCCHHHHHHHHhcCC-CCcEEEEEeecCCcchhCC---HHHH
Confidence 9999999999988 888889999999999984 356799999999996422 4567777899999999986 5778
Q ss_pred HHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHH---
Q 017967 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS--- 331 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~--- 331 (363)
.++|+++|+++|+||+|..+...- ++ .....++++.||||.++.+ .++||+ +++ ++.++++..
T Consensus 169 ~~l~~~~~~~li~D~a~~~~~~~~------~~----~~~~~di~~~s~sK~~~~~-~g~G~~--~~~-~~~~~~~~~~~~ 234 (386)
T 2dr1_A 169 AKVAKEHDKLVFVDAVSAMGGADI------KF----DKWGLDVVFSSSQKAFGVP-PGLAIG--AFS-ERFLEIAEKMPE 234 (386)
T ss_dssp HHHHHHTTCEEEEECTTTBTTBCC------CT----TTTTCSEEEEETTSTTCCC-SSCEEE--EEC-HHHHHHHTTCTT
T ss_pred HHHHHHcCCeEEEEccccccCccc------cc----cccCCcEEEEeccccccCC-CceEEE--EEC-HHHHHHHhcCCC
Confidence 888999999999999998765421 11 1224679999999999865 248999 765 564443310
Q ss_pred ---------HHHhh--hccccCCCchHHHHHHhcccccc
Q 017967 332 ---------QLKRL--ARPMYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 332 ---------~l~~~--~~~~~~~~s~~~q~~~~~~l~~~ 359 (363)
.+... ......+++.+.|.++...|+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 273 (386)
T 2dr1_A 235 RGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRII 273 (386)
T ss_dssp CCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHH
T ss_pred CceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 11222 12334578888888887766543
No 90
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.90 E-value=5.3e-23 Score=197.20 Aligned_cols=236 Identities=13% Similarity=0.084 Sum_probs=160.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc------CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~------~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.+|||+.|.|.. ...++.+.+++.+.+.. .....|+...+..++++++++++.. ++.+++
T Consensus 44 ~~id~~~~~~~g----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~--- 109 (399)
T 3tqx_A 44 EVLNFCANNYLG----LADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGT-------DDTILY--- 109 (399)
T ss_dssp EEEECSSCCTTS----CTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTC-------SEEEEE---
T ss_pred eEEEeeccCccc----ccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCC-------CcEEEE---
Confidence 689999886531 12345566655554422 1112234556689999999999732 245544
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC---CcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~~~~ 234 (363)
.+|++++.++ +...+.+||.|+++.|+|..+...++..|.+++.++. .|++.+++.+++... ++++++
T Consensus 110 ~sGt~a~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~ 180 (399)
T 3tqx_A 110 SSCFDANGGL--FETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIA 180 (399)
T ss_dssp SCHHHHHHTT--HHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEE
T ss_pred CchHHHHHHH--HHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEE
Confidence 4567888776 4455779999999999999999999999999999885 467788888875222 678888
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-cCCeEEEEEcCccccccccccc
Q 017967 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERI 313 (363)
Q Consensus 235 i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~l~G~Rv 313 (363)
+++||||||.+++ +++|+++|+++|+++|+||+|....++.. ..+.....+ .....++++||||.++ |++.
T Consensus 181 ~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~di~~~s~sK~~~--g~~g 252 (399)
T 3tqx_A 181 TDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGEN---GRGTPEYCGVADRVDILTGTLGKALG--GASG 252 (399)
T ss_dssp EESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT---SCCHHHHHTCTTCCSEEEEESSSSSC--SSCC
T ss_pred EeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCchHHhhCCCCCCcEEEecchHhcc--cCce
Confidence 9999999999998 67888889999999999999963222211 112222222 1355699999999998 5566
Q ss_pred eEEEEeeCChhHHHHHHHHHHhhhcc--ccCCCchHHHHHHhcccc
Q 017967 314 GAMNVVCSSSDLAARVKSQLKRLARP--MYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 314 G~i~~v~~~~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~~~~~l~ 357 (363)
||+ +++ ++ +++.+...... .....+.+.+.++...++
T Consensus 253 G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (399)
T 3tqx_A 253 GYT--SGH-KE----IIEWLRNRSRPYLFSNTVAPVIVATSLKVLE 291 (399)
T ss_dssp EEE--EEC-HH----HHHHHHHHCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred EEE--EcC-HH----HHHHHHHhCcceeccCCCcHHHHHHHHHHHH
Confidence 999 665 66 44444433221 123566666666655544
No 91
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.90 E-value=1.6e-23 Score=200.78 Aligned_cols=222 Identities=16% Similarity=0.098 Sum_probs=159.8
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchhHHHHHHHHHHHHhCCCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGA 178 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~gd 178 (363)
..+++.+.+++.+... ..|.+ ...++++++++++....+. +++ ++++ |.||+++++++ +...+.+||
T Consensus 43 ~~~~~~v~~a~~~~~~----~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~--t~g~t~al~~~--~~~~~~~gd 110 (393)
T 1vjo_A 43 SNAHPSVLQAMNVSPV----GHLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAV--SGTGTAAMEAT--IANAVEPGD 110 (393)
T ss_dssp CCCCHHHHHHHSSCCC----CTTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEE--SSCHHHHHHHH--HHHHCCTTC
T ss_pred CCCCHHHHHHHhcccc----cccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEE--eCchHHHHHHH--HHhccCCCC
Confidence 4456777777644321 24643 2445666666655444333 356 8888 99999999988 444467999
Q ss_pred EEEEcCCCCcc--hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHH
Q 017967 179 KVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (363)
Q Consensus 179 ~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~ 256 (363)
+|++++|+|.. +...++..|++++.++++ .++.+|++.|++.+++. +++++++++||||||.+++ +++|++
T Consensus 111 ~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---l~~i~~ 183 (393)
T 1vjo_A 111 VVLIGVAGYFGNRLVDMAGRYGADVRTISKP--WGEVFSLEELRTALETH--RPAILALVHAETSTGARQP---LEGVGE 183 (393)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CTTHHH
T ss_pred EEEEEcCChhHHHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHhhC--CceEEEEeccCCCcceecc---HHHHHH
Confidence 99999999999 888999999999999984 35679999999999741 3457788999999999987 667888
Q ss_pred HHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhh
Q 017967 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 336 (363)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~ 336 (363)
+|+++|+++|+||+|. +.... . . .......+++.|+||.++.+| |+||+ +++ ++ +++.+...
T Consensus 184 l~~~~~~~li~Dea~~-~g~~~--~---~----~~~~~~di~~~s~sK~l~~~~-~~G~l--~~~-~~----~~~~~~~~ 245 (393)
T 1vjo_A 184 LCREFGTLLLVDTVTS-LGGVP--I---F----LDAWGVDLAYSCSQKGLGCSP-GASPF--TMS-SR----AIEKLQRR 245 (393)
T ss_dssp HHHHHTCEEEEECTTT-TTTSC--C---C----TTTTTCSEEECCSSSTTCSCS-SCEEE--EEC-HH----HHHHHHTC
T ss_pred HHHHcCCEEEEECCcc-ccCcC--C---c----ccccCccEEEEcCcccccCCC-ceEEE--EEC-HH----HHHHHhcc
Confidence 8999999999999998 32211 1 1 122346788999999998777 99999 765 55 44444321
Q ss_pred ----h---------------ccccC-CCchHHHHHHhccccc
Q 017967 337 ----A---------------RPMYS-NPPPMLLGIQLSSMNG 358 (363)
Q Consensus 337 ----~---------------~~~~~-~~s~~~q~~~~~~l~~ 358 (363)
. ..... +++.++|.++...|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~ 287 (393)
T 1vjo_A 246 RTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRL 287 (393)
T ss_dssp SSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 0 01122 7788888888776654
No 92
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.89 E-value=9.5e-23 Score=195.56 Aligned_cols=211 Identities=13% Similarity=0.043 Sum_probs=156.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCC------CCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKE------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~------Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+.|+.+.+. ..++.+.+++.+.+.... ... |.+..+..++|+++++++... ++++|++
T Consensus 23 ~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~- 90 (406)
T 1kmj_A 23 PLAYLDSAASA------QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEELVF- 90 (406)
T ss_dssp ECEECCTTTCC------CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred ceEEecCCccC------CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence 57899888751 245677777766653210 011 234567889999999996431 3578988
Q ss_pred eccchhHHHHHHHHHHHH--hCCCCEEEEcCCCCcch----HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 156 QGLSGTGSLRLAAALIER--YFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~--~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
|.|+++|++++...+.. +.+||+|+++.|+|... ...++..|++++.++.+ .++.+|++.+++.++ ++
T Consensus 91 -~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~l~---~~ 164 (406)
T 1kmj_A 91 -VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPTLFD---EK 164 (406)
T ss_dssp -ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC--TTSCBCGGGHHHHCC---TT
T ss_pred -eCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecC--CCCCcCHHHHHHHhc---cC
Confidence 99999999998433211 57999999999998654 44567789999999984 357789999999886 35
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++|+||||.+++ +++|.++|+++|+++|+||+|...... . .+.. ....+++.||||.+|.+
T Consensus 165 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~---~---~~~~----~~~d~~~~s~~K~~g~~ 231 (406)
T 1kmj_A 165 TRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHP---V---DVQA----LDCDFYVFSGHKLYGPT 231 (406)
T ss_dssp EEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHH----HTCSEEEEEGGGTTSCT
T ss_pred CeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCC---C---cccc----cCCCEEEEEchhccCCC
Confidence 678888999999999998 677888899999999999999864321 1 1211 14678899999999988
Q ss_pred cccceEEEEeeCChhHHHHHHHHHH
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~ 334 (363)
| +||+ +++ ++ +++.+.
T Consensus 232 G--~G~~--~~~-~~----~~~~~~ 247 (406)
T 1kmj_A 232 G--IGIL--YVK-EA----LLQEMP 247 (406)
T ss_dssp T--CEEE--EEC-HH----HHHHCC
T ss_pred C--cEEE--EEe-HH----HHhhcC
Confidence 8 8999 665 66 455444
No 93
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.89 E-value=6.9e-23 Score=198.48 Aligned_cols=248 Identities=10% Similarity=0.025 Sum_probs=168.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|++.|.+...-+. .++.+.+++.+.+.... ...|.+..+..+|++++++++.+ . .+++|++ |+||+
T Consensus 42 ~~id~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~-~~~~v~~--~~g~~ 112 (426)
T 1sff_A 42 EYLDFAGGIAVLNTGH--LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPG----D-FAKKTLL--VTTGS 112 (426)
T ss_dssp EEEESSHHHHTCTTCB--TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSC----S-SCEEEEE--ESSHH
T ss_pred EEEEcccChhhcccCC--CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCc----c-cccEEEE--eCchH
Confidence 6889988874212232 46677787777664321 12466788999999999999632 1 2478988 99999
Q ss_pred HHHHHHHHHH-HHhCCCCEEEEcCCCCcchH-HHHhhCCCC-------------eEEEecccC---CCCCCCHHHHHHHH
Q 017967 162 GSLRLAAALI-ERYFPGAKVLISSPTWGNHK-NIFNDARVP-------------WSEYRYYDP---KTVGLDFEGMIADI 223 (363)
Q Consensus 162 ~al~l~~~l~-~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~-------------~~~v~~~~~---~~~~~d~~~l~~~l 223 (363)
+|++++..+. ....+| .|++++|+|.++. ..+...|.+ ++.+++... .++.+|++.|++.+
T Consensus 113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l 191 (426)
T 1sff_A 113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 191 (426)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence 9999985532 334565 8999999998764 355555543 666776320 12347899999998
Q ss_pred HcC--CCCcEEEEE-cCCCCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE
Q 017967 224 KAA--PGGSFILLH-GCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (363)
Q Consensus 224 ~~~--~~~~~~~~i-~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 299 (363)
++. +++++++++ +++|| || .+++.+++++|.++|+++|+++|+||+|.+|.+.+. ...+ +.......+
T Consensus 192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~----~~~~~~~di 263 (426)
T 1sff_A 192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT---LFAM----EQMGVAPDL 263 (426)
T ss_dssp HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGG----GGTTSCCSE
T ss_pred HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc---hhhh----hhcCCCCCE
Confidence 731 123444444 56788 99 889999999999999999999999999999865431 1111 111112234
Q ss_pred EcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 300 ~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.||||.++. |+|+||+ +++ ++ +++.+.........+.+.++|.++...|+
T Consensus 264 ~s~sK~~~~-GlriG~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~aal~ 313 (426)
T 1sff_A 264 TTFAKSIAG-GFPLAGV--TGR-AE----VMDAVAPGGLGGTYAGNPIACVAALEVLK 313 (426)
T ss_dssp EEECGGGGT-SSCCEEE--EEE-HH----HHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred EEEcccccC-CCceEEE--EEc-HH----HHhhhccCCcCcCCCCCHHHHHHHHHHHH
Confidence 499999995 9999999 776 55 44444433233445778899988875554
No 94
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.89 E-value=1e-22 Score=191.89 Aligned_cols=210 Identities=16% Similarity=0.103 Sum_probs=147.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+|+|+.+.+ +++.+.+.+++.+... .. ..|.+..+..+||+++|+++.. +++++ +.||+++
T Consensus 4 ~~i~~~~~~~------~~p~~~~~~a~~~~~~-~~-~~y~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a 65 (347)
T 1jg8_A 4 MMIDLRSDTV------TKPTEEMRKAMAQAEV-GD-DVYGEDPTINELERLAAETFGK--------EAALF--VPSGTMG 65 (347)
T ss_dssp -CEECSCGGG------CCCCHHHHHHHHTCCC-CC-GGGTCCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHH
T ss_pred eEEEeccccC------CCCCHHHHHHHhcCCC-CC-cccCCChHHHHHHHHHHHHhCC--------ceEEE--ecCcHHH
Confidence 5789988775 3356778777654321 12 4687888999999999999732 35555 7888899
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcch-H--HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNH-K--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGC 237 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~-~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~ 237 (363)
+.++ +...+.|||+|++++|+|... . ..++..|++++.+ .. +++.+|++.+++++++. .++++++++++
T Consensus 66 ~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~ 140 (347)
T 1jg8_A 66 NQVS--IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIEN 140 (347)
T ss_dssp HHHH--HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEES
T ss_pred HHHH--HHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEec
Confidence 7776 444567999999999998653 2 2567789998888 42 34568999999988641 12477888899
Q ss_pred CCCCC-CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCC--cCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccce
Q 017967 238 AHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF--ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 238 p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~--~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
||||| |.+++.+++++|+++|+++|+++|+|++|... .+.+. +...+....+ . ++.||||.++.+ +|
T Consensus 141 ~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~~d-~-~~~s~sK~l~~~---~G 210 (347)
T 1jg8_A 141 THNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV-----PVKEYAGYAD-S-VMFCLSKGLCAP---VG 210 (347)
T ss_dssp SBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC-----CHHHHHHTCS-E-EEEESSSTTCCS---SC
T ss_pred cccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC-----ChHHhccccc-E-EEEecccccCCC---ce
Confidence 99999 99999999999999999999999999986421 11111 1122222333 3 345899998743 78
Q ss_pred EEEEeeCChhHHHH
Q 017967 315 AMNVVCSSSDLAAR 328 (363)
Q Consensus 315 ~i~~v~~~~~~~~~ 328 (363)
|+ ++.+++.+++
T Consensus 211 ~~--~~~~~~~~~~ 222 (347)
T 1jg8_A 211 SV--VVGDRDFIER 222 (347)
T ss_dssp EE--EEECHHHHHH
T ss_pred EE--EEcCHHHHHH
Confidence 64 3445764433
No 95
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.89 E-value=2.1e-21 Score=189.90 Aligned_cols=220 Identities=10% Similarity=0.040 Sum_probs=156.5
Q ss_pred CcEEeecccc-CCCCCC---ccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 84 KKLNLGVGAY-RTEELQ---PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 84 ~~i~l~~g~~-~~~~~~---~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
+.++|+.|.+ .|...+ ..+.+.+.+++. ... ..|.+..|..+||+++++++.. +++++ |.|
T Consensus 34 ~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~~-~~y~~~~~~~~l~~~la~~~~~--------~~~~~--~~~ 98 (456)
T 2ez2_A 34 NTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MGD-EAYAGSENFYHLERTVQELFGF--------KHIVP--THQ 98 (456)
T ss_dssp CGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TCC-CCSSSCHHHHHHHHHHHHHHCC--------SEEEE--ESS
T ss_pred CcccCCcccceeeeccccCCccCCHHHHHHhh----cch-hhcccChhHHHHHHHHHHHhCC--------CcEEE--eCC
Confidence 5677777753 222221 134455655543 222 4688888999999999999732 46767 999
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCC-cchHHHHhhCCCCeEEEecccC---C-----CCCCCHHHHHHHHHcCC-CC
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDARVPWSEYRYYDP---K-----TVGLDFEGMIADIKAAP-GG 229 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~~~---~-----~~~~d~~~l~~~l~~~~-~~ 229 (363)
|++|+.++. ..++.+|| +++.|+| ..+...++..|++++.+++++. . ++++|++.|++++++.. ..
T Consensus 99 gt~a~~~al--~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~ 174 (456)
T 2ez2_A 99 GRGAENLLS--QLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAEN 174 (456)
T ss_dssp HHHHHHHHH--HHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGG
T ss_pred cHHHHHHHH--HHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccc
Confidence 999999884 44467999 7889999 8778889999999999988531 1 36889999999997522 12
Q ss_pred cEEEEEcCCCC-CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC----------CcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 230 SFILLHGCAHN-PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG----------FASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 230 ~~~~~i~~p~N-PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~----------~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
.+++++++||| |||.+++.+++++|+++|+++|+++|+||+|.. +.+.+ ....++........++++
T Consensus 175 ~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~d~~~ 252 (456)
T 2ez2_A 175 IAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFEN--KSIAEIVHEMFSYADGCT 252 (456)
T ss_dssp EEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTT--SCHHHHHHHHHTTCSEEE
T ss_pred eeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCC--cchhhhhhhhcccCCEEE
Confidence 37888899999 999999999999999999999999999999875 34432 111111101122245555
Q ss_pred EEcCccccccccccceEEEEeeCChhHHHHH
Q 017967 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 299 ~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
+ |++|.++ +| |.||+ ++.+++.++++
T Consensus 253 ~-S~kk~~~-~~-~gG~~--~~~~~~~~~~~ 278 (456)
T 2ez2_A 253 M-SGKKDCL-VN-IGGFL--CMNDDEMFSSA 278 (456)
T ss_dssp E-ETTTTTC-CS-SCEEE--EESCHHHHHHH
T ss_pred E-eCcccCC-CC-ceeEE--EECCHHHHHHH
Confidence 5 7888765 77 89999 77567744433
No 96
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.89 E-value=6.4e-23 Score=201.49 Aligned_cols=231 Identities=13% Similarity=0.102 Sum_probs=156.3
Q ss_pred CcEEeecc-ccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVG-AYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g-~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+.|+|+.| .+ +...++.+.+.......... ....+.|. ..|.+ +++++++++....+. +++++ +.+|++
T Consensus 90 ~~i~l~~g~~~-~~~~~~~i~~a~~~~~~~~~-~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~--~~sGt~ 159 (464)
T 1ibj_A 90 LLVNLDNKFDP-FDAMSTPLYQTATFKQPSAI-ENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRAFC--FTSGMA 159 (464)
T ss_dssp HHTCCCCSSCT-TCCSSCCCCCCSBCCCSSSS-CCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEE--ESSHHH
T ss_pred eEEECCCCCCC-CCCCCccHHhhhhhhhhccc-ccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeEEE--ECCHHH
Confidence 57888887 43 33333333332221100001 11225575 44544 555555555443332 36655 788899
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCC
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p 238 (363)
|+.++ +..+.+||+|+++.|+|..+... ++..|++++.++.. |++.++++++ ++++++++++|
T Consensus 160 al~~~---l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~---~~tk~v~l~~p 226 (464)
T 1ibj_A 160 ALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIG---PQTKLVWLESP 226 (464)
T ss_dssp HHHHH---HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCC---SSEEEEEECSS
T ss_pred HHHHH---HHHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhc---cCceEEEEeCC
Confidence 98766 33567999999999999998764 45789999998862 7899999886 35788889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMN 317 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~ 317 (363)
|||||.+++ +++|+++|+++|+++|+||+|....... +. + .+..++++|+||.++. .|+|+||+
T Consensus 227 ~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~~~~------~~----~-~~~div~~S~sK~~~g~~Gl~~G~l- 291 (464)
T 1ibj_A 227 TNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVLSR------PL----E-LGADIVMHSATKFIAGHSDVMAGVL- 291 (464)
T ss_dssp CTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTTCC------GG----G-TTCSEEEEETTTTTTCSSCCCCEEE-
T ss_pred CCCCCEeec---HHHHHHHHHHcCCEEEEECCCcccccCC------hh----h-cCCEEEEECCcccccCCCCCcEEEE-
Confidence 999999995 6778888999999999999997532210 11 1 2578999999998864 49999999
Q ss_pred EeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 318 VVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 318 ~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++++++ +++.+.........+.+.+.|.++...|+
T Consensus 292 -~~~~~~----l~~~l~~~~~~~g~~~~~~~~~a~~~al~ 326 (464)
T 1ibj_A 292 -AVKGEK----LAKEVYFLQNSEGSGLAPFDCWLCLRGIK 326 (464)
T ss_dssp -EECSHH----HHHHHHHHHHHTTCBCCHHHHHHHHHHHT
T ss_pred -EEChHH----HHHHHHHHHHhcCCCCCHHHHHHHHhchh
Confidence 777656 44445444433445677888887666554
No 97
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.88 E-value=9.3e-23 Score=194.74 Aligned_cols=205 Identities=12% Similarity=0.011 Sum_probs=149.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC---CC---CCCC-CcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NK---EYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~---~Y~~-~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
+.++|..+.+ ...++.+.+++.+.+.... .. .|.. ..+..++|+++++++. +++++|++
T Consensus 16 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g------~~~~~v~~-- 81 (390)
T 1elu_A 16 NKTYFNFGGQ------GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN------VDPNTITI-- 81 (390)
T ss_dssp TSEECCTTTC------CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT------SCGGGEEE--
T ss_pred CeEEecCCcc------CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC------CCHHHEEE--
Confidence 6788887653 2234566666655442210 01 3533 3688999999999963 23578988
Q ss_pred ccchhHHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHH----HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 157 GLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNI----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
|.||+++++++ +..+ +.+||+|+++.|+|..+... ++..|++++.++.+.++++.+|++.+++.++ ++++
T Consensus 82 ~~g~t~a~~~~--~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~~ 156 (390)
T 1elu_A 82 TDNVTTGCDIV--LWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG---PKTR 156 (390)
T ss_dssp ESSHHHHHHHH--HHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC---TTEE
T ss_pred eCChHHHHHHH--HhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC---CCce
Confidence 99999999988 3344 56999999999999997654 4667999999998533567899999998876 3567
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHH----hcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQ----EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~----~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
++++++||||||.+++ +++|.++|+ ++|+++|+||+|...... . . .......+++.|+||.+
T Consensus 157 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~---~---~----~~~~~~d~~~~s~~K~~- 222 (390)
T 1elu_A 157 LVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---L---D----FSRLEVDYYAFTGHKWF- 222 (390)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBC---C---C----TTTSCCSEEEEESSSTT-
T ss_pred EEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCcC---C---C----hhhcCCCEEEccccccc-
Confidence 8888999999999999 667777899 999999999999742211 0 1 11224568899999944
Q ss_pred cccccceEEEEeeCChh
Q 017967 308 LYAERIGAMNVVCSSSD 324 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~ 324 (363)
..|.|+||+ +++ ++
T Consensus 223 ~~~~g~G~~--~~~-~~ 236 (390)
T 1elu_A 223 AGPAGVGGL--YIH-GD 236 (390)
T ss_dssp CCCTTCEEE--EEC-TT
T ss_pred cCCCceEEE--EEC-HH
Confidence 357789999 666 44
No 98
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.88 E-value=2.2e-22 Score=191.49 Aligned_cols=238 Identities=13% Similarity=0.102 Sum_probs=164.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++||+.|.+....+ +.++.+.+++.+.+... ....| +..+..++++++++++ +. ++++++ |+||+
T Consensus 29 ~~ld~~~~~~~~~~g--~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~---~~~v~~--~~g~t 96 (375)
T 2eh6_A 29 EYLDFVSGIGVNSLG--HAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT---EGKVFF--ANSGT 96 (375)
T ss_dssp EEEESSHHHHTCTTC--BSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS---CEEEEE--ESSHH
T ss_pred EEEEcCCcccccccC--CCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC---CCeEEE--eCchH
Confidence 689999988632222 24667777776665321 12356 5678899999999985 22 368877 99999
Q ss_pred HHHHHHHHHHH-Hh---CCC-CEEEEcCCCCcchHHHHhhCCCC-------------eEEEecccCCCCCCCHHHHHHHH
Q 017967 162 GSLRLAAALIE-RY---FPG-AKVLISSPTWGNHKNIFNDARVP-------------WSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 162 ~al~l~~~l~~-~~---~~g-d~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
++++++..... .. .|| |+|++++|+|..+...+...+.. +..++. .|++.+++++
T Consensus 97 ~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 169 (375)
T 2eh6_A 97 ESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLL 169 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTC
T ss_pred HHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHHh
Confidence 99998854322 24 688 99999999999886655433221 222221 4889998877
Q ss_pred HcCCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 224 KAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
+ +++++++++++|||||.+ .+.+++++|.++|+++|+++|+||+|.+|...+. ......+ ....+++ ||
T Consensus 170 ~---~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~-~~~~d~~---s~ 239 (375)
T 2eh6_A 170 D---EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE---FYAYQHF-NLKPDVI---AL 239 (375)
T ss_dssp C---TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGGG-TCCCSEE---EE
T ss_pred c---CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc---chhhhhc-CCCCCEE---EE
Confidence 6 356788889999999999 5789999999999999999999999998765321 1112111 2223443 88
Q ss_pred ccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
||.++ +|+|+||+ +++ ++ +++.+.........+.+.+.|.++...|+.
T Consensus 240 SK~~~-~g~~~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (375)
T 2eh6_A 240 AKGLG-GGVPIGAI--LAR-EE----VAQSFTPGSHGSTFGGNPLACRAGTVVVDE 287 (375)
T ss_dssp CGGGG-TTSCCEEE--EEE-HH----HHTTCCTTSCCCSSTTCHHHHHHHHHHHHH
T ss_pred ccccc-CCCCeEEE--EEc-HH----HHhhhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 89999 79999999 665 45 444444322233446688888877665543
No 99
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.88 E-value=6.8e-22 Score=190.12 Aligned_cols=237 Identities=12% Similarity=0.048 Sum_probs=164.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.+.+..+. ..+.+.+++.+.+.... ...+.+.....++++.+++++ + .+++++ |+||++
T Consensus 40 ~~lD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-~-------~~~v~~--~~gg~~ 107 (406)
T 4adb_A 40 EYIDFAGGIAVNALGH--AHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDAT-F-------ADRVFF--CNSGAE 107 (406)
T ss_dssp EEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHS-S-------CSEEEE--ESSHHH
T ss_pred EEEECCCchhhcccCC--CCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhC-C-------CCeEEE--eCcHHH
Confidence 6899998843222232 35677777766654311 111224455677888888774 2 358877 999999
Q ss_pred HHHHHHHHHHHh-----CCC-CEEEEcCCCCcchHHHHhhCCC-------------CeEEEecccCCCCCCCHHHHHHHH
Q 017967 163 SLRLAAALIERY-----FPG-AKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 163 al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
|++++..++... .+| |.|++++|+|..+...+...+. .+..+|. .|++.|++++
T Consensus 108 a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 180 (406)
T 4adb_A 108 ANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALI 180 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHh
Confidence 999885433221 055 9999999999988555443332 3334433 3788998877
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCC--CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~--s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
+ +++++++++ |+||||.++ +.+++++|+++|+++|+++|+||+|.+|.+.+. ...... .+...+++ +
T Consensus 181 ~---~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~-~~~~~d~~---t 249 (406)
T 4adb_A 181 D---DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE---LYAYMH-YGVTPDLL---T 249 (406)
T ss_dssp S---TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSHHHH-HTCCCSEE---E
T ss_pred c---CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch---hHHHHh-cCCCCCEE---E
Confidence 6 356677766 999999998 999999999999999999999999998876532 122222 23344555 6
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|||.++ +|+|+||+ +++ ++ +++.+.........+.+.++|.++...|+.
T Consensus 250 ~sK~~~-~G~r~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 298 (406)
T 4adb_A 250 TAKALG-GGFPVGAL--LAT-EE----CARVMTVGTHGTTYGGNPLASAVAGKVLEL 298 (406)
T ss_dssp ECGGGG-TTSCCEEE--EEC-HH----HHHTCCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred echhhc-CCCCeEEE--EEc-HH----HHhhhccCCcCCCCCCCHHHHHHHHHHHHH
Confidence 799999 99999999 665 66 555555554455668889999988776653
No 100
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.88 E-value=1.9e-21 Score=186.96 Aligned_cols=239 Identities=14% Similarity=0.065 Sum_probs=159.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-----CCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-----~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+++++..+.+. +.+ ..+.+.+++.+.+.. . ....|+...+..++|+++|+++.. +++|++ +
T Consensus 47 ~~i~~~~~~~~---~~~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~i~~--~ 113 (401)
T 2bwn_A 47 DITVWCGNDYL---GMG-QHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-------EAALVF--S 113 (401)
T ss_dssp EEEECSCSCTT---SGG-GCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-------SEEEEE--S
T ss_pred cEEEeeCCCcc---cCC-CCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------CcEEEE--C
Confidence 45777655431 111 234577776665532 1 113355667899999999999632 467766 6
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC-CCcEEEEEc
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHG 236 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~ 236 (363)
.|++ +...+..++....+||.|+++.|+|..+...++..|++++.++.+ |++.+++.++... +++++++++
T Consensus 114 sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~ 185 (401)
T 2bwn_A 114 SAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFE 185 (401)
T ss_dssp CHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEE
T ss_pred CcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEe
Confidence 6665 555553322223599999999999999999999999999999862 7889998887532 356788899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccceE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
+|+||||.+++ +++|+++|+++|+++|+||+|....++.. . ..+....+. ...+++++||||.||++| ||
T Consensus 186 ~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~-g--~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~ 256 (401)
T 2bwn_A 186 SVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPR-G--AGVAERDGLMHRIDIFNGTLAKAYGVFG---GY 256 (401)
T ss_dssp SBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTT-S--CCHHHHHTCGGGCSEEEEESSSTTCSCC---EE
T ss_pred cCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCC-C--ceeeeccCccccCcEEEeechhhccCCC---CE
Confidence 99999999998 57788889999999999999995444311 1 111111111 124788999999999888 99
Q ss_pred EEEeeCChhHHHHHHHHHHhhhcc--ccCCCchHHHHHHhcccccc
Q 017967 316 MNVVCSSSDLAARVKSQLKRLARP--MYSNPPPMLLGIQLSSMNGK 359 (363)
Q Consensus 316 i~~v~~~~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~~~~~l~~~ 359 (363)
+ +++ ++. ++.+...... ...+.+.+.|.++...++..
T Consensus 257 ~--~~~-~~~----~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~ 295 (401)
T 2bwn_A 257 I--AAS-ARM----VDAVRSYAPGFIFSTSLPPAIAAGAQASIAFL 295 (401)
T ss_dssp E--EEC-HHH----HHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHH
T ss_pred E--ecC-HHH----HHHHHHhCcCceecCCCCHHHHHHHHHHHHHH
Confidence 9 664 663 3444332211 11234457776665555443
No 101
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.88 E-value=5.5e-22 Score=190.60 Aligned_cols=236 Identities=12% Similarity=0.124 Sum_probs=162.2
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHcc-CCC---CCC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GEN---KEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
..+|||+.|.|. + ...++.+.+++.+.+.. ... ..| +...+..++|+++++++. . ++.+++
T Consensus 45 ~~~id~~~~~~~---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~------~~~i~~-- 111 (401)
T 1fc4_A 45 SHVINFCANNYL---G-LANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG-M------EDAILY-- 111 (401)
T ss_dssp CEEEECCCSCTT---S-CTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT-C------SEEEEE--
T ss_pred ccEEEeeccCcc---c-ccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC-C------CcEEEe--
Confidence 368999988542 2 11356666666555432 110 122 125678999999999972 2 244544
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC---CcEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFIL 233 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~~~ 233 (363)
.+|++++.++ +...+.+||.|+++.|+|..+...++..|++++.++. .|++.+++.+++..+ +++++
T Consensus 112 -~sGs~a~~~~--~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v 181 (401)
T 1fc4_A 112 -SSCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLI 181 (401)
T ss_dssp -SCHHHHHHTT--HHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEE
T ss_pred -CChHHHHHHH--HHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEE
Confidence 5567787776 4445679999999999999888889999999988863 478999988874211 46788
Q ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhc-CCeEEEEEcCcccc-cccc
Q 017967 234 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATR-GMELLVAQSYSKNL-GLYA 310 (363)
Q Consensus 234 ~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~-~l~G 310 (363)
++++||||||.+++ +++|.++|+++|+++|+||+|. ++.+... ... ..+.+. .+.+++++||||.+ |.+|
T Consensus 182 ~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g-~~~---~~~~~~~~~~di~~~s~sK~~~~~~g 254 (401)
T 1fc4_A 182 ATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENG-RGS---HEYCDVMGRVDIITGTLGKALGGASG 254 (401)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTS-CCH---HHHTTCTTCCSEEEEESSSTTCSSSC
T ss_pred EEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCC-Ccc---HHHcCCCcCCcEEEecchhhccCCCC
Confidence 88999999999998 6778888999999999999995 8763211 111 122221 24579999999999 6554
Q ss_pred ccceEEEEeeCChhHHHHHHHHHHhhhcc--ccCCCchHHHHHHhccccc
Q 017967 311 ERIGAMNVVCSSSDLAARVKSQLKRLARP--MYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 311 ~RvG~i~~v~~~~~~~~~~~~~l~~~~~~--~~~~~s~~~q~~~~~~l~~ 358 (363)
||+ +++ ++ +++.+...... ...+++.+.|.++...|+.
T Consensus 255 ---G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~ 294 (401)
T 1fc4_A 255 ---GYT--AAR-KE----VVEWLRQRSRPYLFSNSLAPAIVAASIKVLEM 294 (401)
T ss_dssp ---EEE--EEC-HH----HHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred ---EEE--EcC-HH----HHHHHHHhCcCceeCCCCCHHHHHHHHHHHHH
Confidence 999 664 77 44444433211 1347788888888766554
No 102
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.88 E-value=9.5e-22 Score=188.89 Aligned_cols=236 Identities=13% Similarity=0.118 Sum_probs=160.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|++.|...+..+. ..+.+.+++.+....... ..| +.....++++.+++++ + .+++++ |+||+
T Consensus 41 ~~ld~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~gg~ 107 (397)
T 2ord_A 41 AYLDFTSGIAVNVLGH--SHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNT----F----GGKVFF--ANTGT 107 (397)
T ss_dssp EEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTT----T----SCEEEE--ESSHH
T ss_pred EEEECCccccccccCC--CCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhc----C----CCeEEE--eCCHH
Confidence 6789987742111222 356677776665533111 113 3334566777776664 2 378877 99999
Q ss_pred HHHHHHHHHHHHh----CC-CCEEEEcCCCCcch-HHHHhhCCCC------------eEEEecccCCCCCCCHHHHHHHH
Q 017967 162 GSLRLAAALIERY----FP-GAKVLISSPTWGNH-KNIFNDARVP------------WSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 162 ~al~l~~~l~~~~----~~-gd~Vlv~~P~y~~~-~~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
+|+.++...+... .+ ++.|++.+|+|.+. ...++..|.+ ++.++. .|++.+++.+
T Consensus 108 ~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l 180 (397)
T 2ord_A 108 EANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKM 180 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHh
Confidence 9999885443221 15 47899999999654 4466677765 556654 2899999988
Q ss_pred HcCCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 224 KAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
+ ++++++++++||||||. +++.+++++|+++|+++|+++|+||+|.++.+.+. ..+...+ +...+++ ||
T Consensus 181 ~---~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~~-~~~~d~~---s~ 250 (397)
T 2ord_A 181 S---EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK---LFAYQKY-GVVPDVL---TT 250 (397)
T ss_dssp C---TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSHHHHH-TCCCSEE---EE
T ss_pred h---cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc---chhhhhh-CCCCCee---ee
Confidence 6 35778888999999999 99999999999999999999999999998865431 2223222 2223433 88
Q ss_pred ccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
||.++ +|+|+||+ +++++ ++ .+........++.+.++|.++...|+.
T Consensus 251 sK~~~-~G~r~G~~--~~~~~-----~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~ 297 (397)
T 2ord_A 251 AKGLG-GGVPIGAV--IVNER-----AN-VLEPGDHGTTFGGNPLACRAGVTVIKE 297 (397)
T ss_dssp CGGGG-TTSCCEEE--EECST-----TC-CCCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred ccccC-CCcCeEEE--EEchH-----hc-ccCCCCcCCCCCCCHHHHHHHHHHHHH
Confidence 99999 89999999 77644 33 333222334457788888888776643
No 103
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.88 E-value=1e-22 Score=192.06 Aligned_cols=216 Identities=12% Similarity=-0.042 Sum_probs=154.8
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
|+.|+|+.+.+ ..+++.+.+++.+... +|....|..++++++++++....+ .++++|++ |.||++
T Consensus 13 p~~i~l~~~~~------~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~--~~g~t~ 77 (359)
T 1svv_A 13 PKPYSFVNDYS------VGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHF--ISGGTQ 77 (359)
T ss_dssp --CEECSCSCS------SCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEE--ESCHHH
T ss_pred CeeEEecCCCc------CCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEE--eCCchH
Confidence 46889986542 2456788888777653 365566767777777777655444 34678988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHH--HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC----CCcEEEEEc
Q 017967 163 SLRLAAALIERYFPGAKVLISSPTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHG 236 (363)
Q Consensus 163 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~~~~i~ 236 (363)
+++++ +...+.+||+|++++|+|..+.. .++..|++++.++.+ ++++|++.+++.+++.+ .++++++++
T Consensus 78 a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~ 152 (359)
T 1svv_A 78 TNLIA--CSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYIS 152 (359)
T ss_dssp HHHHH--HHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEE
T ss_pred HHHHH--HHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEE
Confidence 99988 44446799999999999999877 478899999999973 57899999999998531 126777788
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCC--chhHHHHHHhcCCeEEEEEcCccccccccccce
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN--DASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
+| ||||.+++.+++++|+++|+++|+++|+||+|.+|..+.... ....+... ..+++.|++|..+ ...+|
T Consensus 153 ~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-----~d~~~~s~~K~g~--~~~~g 224 (359)
T 1svv_A 153 NT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARL-----TDMFYIGATKAGG--MFGEA 224 (359)
T ss_dssp SS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHH-----CSEEEEECTTTTC--SSCEE
T ss_pred cC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhc-----CCEEEEecccCCC--CCceE
Confidence 88 899999999999999999999999999999985443221111 11111111 2367788999744 35578
Q ss_pred EEEEeeCChhHHHHH
Q 017967 315 AMNVVCSSSDLAARV 329 (363)
Q Consensus 315 ~i~~v~~~~~~~~~~ 329 (363)
++ +++ ++.++++
T Consensus 225 ~l--~~~-~~~~~~~ 236 (359)
T 1svv_A 225 LI--ILN-DALKPNA 236 (359)
T ss_dssp EE--ECS-GGGCTTH
T ss_pred EE--EEc-ccHHHHH
Confidence 88 554 6643333
No 104
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.87 E-value=1e-21 Score=189.97 Aligned_cols=203 Identities=14% Similarity=0.058 Sum_probs=147.5
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC----------CCcchHHHHHHHHHHHhcCCCCcccCCcE
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL----------PIEGLAAFNKVTAELLFGADNSVLKEQRV 152 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~----------~~~G~~~lr~aia~~l~~~~~~~~~~~~i 152 (363)
++.|.|..+.+ ..+++.+.+++.+.+.......++ ...+..++++++++++.. ++++|
T Consensus 21 ~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~------~~~~v 88 (423)
T 3lvm_A 21 KLPIYLDYSAT------TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGA------DPREI 88 (423)
T ss_dssp CSSEECBTTTC------CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTC------CGGGE
T ss_pred CCCEeecCCCc------CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCC------CCCeE
Confidence 46788776543 345677888776554310001111 123457888899988643 36789
Q ss_pred EEEeccchhHHHHHHHHHHHH-h-CCCCEEEEcCCCCcchHHHH---hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 153 ATVQGLSGTGSLRLAAALIER-Y-FPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 153 ~~~~t~ggt~al~l~~~l~~~-~-~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
++ |.||++|++++...+.. + .+||.|+++.|+|+.+...+ +..|++++.++.+ .++.+|++.++++++
T Consensus 89 ~~--~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~--- 161 (423)
T 3lvm_A 89 VF--TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ--RNGIIDLKELEAAMR--- 161 (423)
T ss_dssp EE--ESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC--TTSCCCHHHHHHHCC---
T ss_pred EE--eCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC--CCCccCHHHHHHhcC---
Confidence 88 99999999988543321 1 27999999999999987776 5569999999984 367889999999887
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
++++++++++||||||.+++ +++|+++|+++|+++|+||+|...... . . .......+++.||||.+|
T Consensus 162 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~-----~----~~~~~~di~~~s~sK~~g 228 (423)
T 3lvm_A 162 DDTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP-I-----D----LSQLKVDLMSFSGHKIYG 228 (423)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C-----C----TTTSCCSEEEEESTTTTS
T ss_pred CCcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-c-----C----hhhcCCCEEEechHHhcC
Confidence 35778889999999999999 566788899999999999998653321 0 0 112235688999999888
Q ss_pred cccccceEEEEeeC
Q 017967 308 LYAERIGAMNVVCS 321 (363)
Q Consensus 308 l~G~RvG~i~~v~~ 321 (363)
.+| +||+ +++
T Consensus 229 ~~g--~G~~--~~~ 238 (423)
T 3lvm_A 229 PKG--IGAL--YVR 238 (423)
T ss_dssp CSS--CEEE--EEC
T ss_pred CCC--eEEE--EEe
Confidence 666 8999 665
No 105
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.87 E-value=2.9e-21 Score=187.72 Aligned_cols=235 Identities=14% Similarity=0.085 Sum_probs=161.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc-C-CCCCC----CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.+|||+.|.|. + ....+.+.+++.+.+.. + ....| +......++++++++++ +. + +.++ +
T Consensus 65 ~~id~~~~~~l---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~-g~------~-~~i~--~ 130 (427)
T 2w8t_A 65 DTILLGTYNYM---G-MTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY-GT------T-GAIV--F 130 (427)
T ss_dssp EEEECSCCCTT---C-GGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH-TC------S-EEEE--E
T ss_pred eEEEEECcccc---c-CCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh-CC------C-ceEE--e
Confidence 68999988652 1 11345666666555432 1 11122 23345689999999997 22 2 4444 5
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCC-CcEEEEEc
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG-GSFILLHG 236 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~~~~~~i~ 236 (363)
.+|++++..+ +..++.+||.|+++.|+|..+...++..|.+++.++. .|++.|++.+++..+ ++++++++
T Consensus 131 ~sGs~a~~~a--l~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~ 201 (427)
T 2w8t_A 131 STGYMANLGI--ISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLE 201 (427)
T ss_dssp SCHHHHHHHH--HHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEE
T ss_pred cCcHHHHHHH--HHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEc
Confidence 7777787776 3445679999999999999999999999999888863 589999999985332 57788889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh-cCCeEEEEEcCccccccccccceE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
+++||||.+++ +++|.++|+++|+++|+||+|..+.++.. ..+.....+ ..+.++++.||||.+|++| ||
T Consensus 202 ~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~---g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~ 272 (427)
T 2w8t_A 202 GVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPN---GRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GF 272 (427)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT---SCCHHHHTTCTTCCSEEEEESSSTTCSCC---EE
T ss_pred CCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCchHhhcCCCcCCcEEEecchhhhccCC---CE
Confidence 99999999998 67788889999999999999999876521 112222222 2245899999999998777 99
Q ss_pred EEEeeCChhHHHHHHHHHHhhhc-c-ccCCCchHHHHHHhcccc
Q 017967 316 MNVVCSSSDLAARVKSQLKRLAR-P-MYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 316 i~~v~~~~~~~~~~~~~l~~~~~-~-~~~~~s~~~q~~~~~~l~ 357 (363)
+ +++ ++ +++.+..... . .....+...+.++...|+
T Consensus 273 v--~~~-~~----l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~ 309 (427)
T 2w8t_A 273 V--VSN-HP----KFEAVRLACRPYIFTASLPPSVVATATTSIR 309 (427)
T ss_dssp E--EEC-CT----TGGGGGGTCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred E--EeC-HH----HHHHHHHhcccccccCCCCHHHHHHHHHHHH
Confidence 9 665 55 3444433311 1 123455555555544444
No 106
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.87 E-value=7.7e-22 Score=188.77 Aligned_cols=194 Identities=11% Similarity=-0.067 Sum_probs=139.4
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g 177 (363)
++..+++.+.+++.+.... . ..|....+..++|+++++++.. ++++|++ |.||++++.++. ..++.+|
T Consensus 16 ~~~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--t~g~t~a~~~~~--~~~~~~g 83 (392)
T 2z9v_A 16 GPVNAYPEVLRGLGRTVLY-D-YDPAFQLLYEKVVDKAQKAMRL------SNKPVIL--HGEPVLGLEAAA--ASLISPD 83 (392)
T ss_dssp SCCCCCHHHHHHTTSCCCC-T-TSHHHHHHHHHHHHHHHHHTTC------SSCCEEE--SSCTHHHHHHHH--HHHCCTT
T ss_pred CCcCCCHHHHHHHhccccc-c-ccHHHHHHHHHHHHHHHHHhCC------CCCEEEE--eCCchHHHHHHH--HHhcCCC
Confidence 3345667787776544322 1 1122234678899999999632 2578988 999999999984 3446799
Q ss_pred CEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 178 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 178 d~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
|+|++++|+|..+ ...++..|++++.++++ .++.+|++.+++.+++.+ +++++++++|+||||.+++ +++|.
T Consensus 84 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~nptG~~~~---l~~i~ 157 (392)
T 2z9v_A 84 DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVP--YNEAIDPQAVADMLKAHP-EITVVSVCHHDTPSGTINP---IDAIG 157 (392)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHCSCEEEEECC--TTSCCCHHHHHHHHHHCT-TCCEEEEESEEGGGTEECC---HHHHH
T ss_pred CEEEEecCCcccHHHHHHHHHcCCceEEeeCC--CCCCCCHHHHHHHHhcCC-CCcEEEEeccCCCCceecc---HHHHH
Confidence 9999999999775 34456689999999984 345699999999996422 4567888999999999998 56778
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc-ccccccceEEEEeeCChh
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~ 324 (363)
++|+++|+++|+|++|...... . .+ ......+++.|+||.+ |.+| +||+ +++ ++
T Consensus 158 ~l~~~~~~~li~D~a~~~g~~~---~---~~----~~~~~d~~~~s~sK~~~~~~g--~G~l--~~~-~~ 212 (392)
T 2z9v_A 158 ALVSAHGAYLIVDAVSSFGGMK---T---HP----EDCKADIYVTGPNKCLGAPPG--LTMM--GVS-ER 212 (392)
T ss_dssp HHHHHTTCEEEEECTTTBTTBS---C---CG----GGGTCSEEEECSSSTTCCCSC--CEEE--EEC-HH
T ss_pred HHHHHcCCeEEEEcccccCCcc---c---cc----ccccceEEEecCcccccCCCc--eeEE--EEC-HH
Confidence 8899999999999998632111 0 11 1113458899999955 4455 4999 665 55
No 107
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.87 E-value=6.3e-21 Score=183.47 Aligned_cols=192 Identities=16% Similarity=0.126 Sum_probs=148.3
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (363)
+.....+|++.+++++.. +++++ +.||++|++++ +..++.+||+|+++.|+|..+...+ +..|+
T Consensus 64 ~~~~~~~l~~~la~~~g~--------~~~~~--~~sGt~A~~~a--l~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~ 131 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDA--------AFGRA--FSSGMAAADCA--LRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNV 131 (392)
T ss_dssp CCHHHHHHHHHHHHHTTC--------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTC
T ss_pred CChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCc
Confidence 456678999999999532 35666 89999999888 4445789999999999999877766 67899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++.+ |++.++++++ ++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 132 ~~~~v~~~-------d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~- 197 (392)
T 3qhx_A 132 EYTPVALA-------DLDAVRAAIR---PTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ- 197 (392)
T ss_dssp EEEEECTT-------CHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC-
T ss_pred EEEEeCCC-------CHHHHHHhhC---CCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 99998862 8899999887 35778889999999999986 6778888999999999999998654321
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.. .. ...+++.|+||.+|.+| .|+||+ ++++++ +.+.+...........+++.+.++...++
T Consensus 198 ---~~------~~-~~di~~~S~sK~lg~~g~~~~G~v--~~~~~~----~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 198 ---PL------SL-GADVVLHSTTKYIGGHSDVVGGAL--VTNDEE----LDQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp ---GG------GG-TCSEEEEETTTTTTCSSCCCCEEE--EESCHH----HHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ---hH------Hh-CCcEEEEcCccccCCCCCceEEEE--EECcHH----HHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 11 11 34588999999999777 799999 887666 44445544444556777888877766554
No 108
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.87 E-value=2.5e-21 Score=186.44 Aligned_cols=227 Identities=15% Similarity=0.110 Sum_probs=151.5
Q ss_pred eeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC--CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 88 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 88 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
.+++.| +....++..+.+.++..........+.|. +.....++++.+++++.. + +.++ +.+|++|+.
T Consensus 26 ~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~-------~-~~i~--~~sG~~a~~ 94 (398)
T 1gc0_A 26 GALVPP-VYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGG-------E-AGLA--LASGMGAIT 94 (398)
T ss_dssp TBSSCC-BCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTC-------S-EEEE--ESSHHHHHH
T ss_pred CCcCCC-ccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCC-------C-cEEE--ECCHHHHHH
Confidence 345554 44555666677766654221111113343 566788999999999632 2 4444 567789988
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 166 LAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 166 l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
++ +..++.+||+|+++.|+|..+...+ +..|++++.++. .|++.+++.++ ++++++++++|+||
T Consensus 95 ~~--l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~---~~~~~v~~~~~~np 162 (398)
T 1gc0_A 95 ST--LWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALEAAMT---PATRVIYFESPANP 162 (398)
T ss_dssp HH--HHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-------TCHHHHHHHCC---TTEEEEEEESSCTT
T ss_pred HH--HHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-------CCHHHHHHhcC---CCCeEEEEECCCCC
Confidence 88 4444679999999999999887766 677999888875 27899999886 35778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEee
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVC 320 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~ 320 (363)
||.+++ +++|.++|+++|+++|+||+|..+.+.. +. . ....+++.|+||.++.+|.|+ ||+ ++
T Consensus 163 tG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~------~~----~-~~~d~~~~S~sK~~~~~~~~~~G~l--~~ 226 (398)
T 1gc0_A 163 NMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR------PL----E-LGADLVVHSATKYLSGHGDITAGIV--VG 226 (398)
T ss_dssp TCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC------GG----G-GTCSEEEEETTTTTTCSSSCCCEEE--EE
T ss_pred Cccccc---HHHHHHHHHHcCCEEEEECCCcccccCC------ch----h-hCceEEEECCccccCCCCCCeEEEE--EE
Confidence 999986 6778888999999999999998665431 11 1 135688999999999999998 888 66
Q ss_pred CChhHHHHHHHHHHhhhcc-ccCCCchHHHHHHhcccc
Q 017967 321 SSSDLAARVKSQLKRLARP-MYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~-~~~~~s~~~q~~~~~~l~ 357 (363)
+ ++.++ +.+...... .....+.+.+.++...|+
T Consensus 227 ~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 1gc0_A 227 S-QALVD---RIRLQGLKDMTGAVLSPHDAALLMRGIK 260 (398)
T ss_dssp C-HHHHH---HHHHTHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred C-hHHHH---HHHHHHhhccCCCCCCHHHHHHHHhccc
Confidence 5 44322 133333222 234567777777655554
No 109
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.87 E-value=2.1e-21 Score=185.32 Aligned_cols=203 Identities=13% Similarity=0.049 Sum_probs=144.8
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-------
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------- 174 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~------- 174 (363)
+.+.+.+++.+.+.... ..|....+..++++++.+++....+. ++++|++ |+||++++.++...+...
T Consensus 42 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~i~~--~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 42 VLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLNN--KDAYGHI--VSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp CCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTTC--TTCEEEE--ESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCC--CCCCEEE--ecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 45677777766654321 22222235555555555554443332 3678877 999999999885443221
Q ss_pred ----CCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHH
Q 017967 175 ----FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 250 (363)
Q Consensus 175 ----~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~ 250 (363)
.+||+|+++.|+|..+...++..|++++.+|++ .++.+|++.+++.+++. +++++++++|+||||.+.+
T Consensus 117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~--- 189 (397)
T 3f9t_A 117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK--EDYTIDEKFVKDAVEDY--DVDGIIGIAGTTELGTIDN--- 189 (397)
T ss_dssp TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC--TTSSBCHHHHHHHHHHS--CCCEEEEEBSCTTTCCBCC---
T ss_pred cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC--CCCcCCHHHHHHHHhhc--CCeEEEEECCCCCCCCCCC---
Confidence 149999999999999999999999999999984 35789999999999852 4557777899999999976
Q ss_pred HHHHHHHHHhcCCeEEEecCCCCCcCCCCCC--------chhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 251 WEKIADVIQEKNHIPFFDVAYQGFASGSLDN--------DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 251 ~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~--------~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
+++|.++|+++|+++|+||+|..+..+.... .... ... ...+++.|++|.++ +|.|+||+ ++.+
T Consensus 190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~s~~K~~~-~~~~~g~~--~~~~ 261 (397)
T 3f9t_A 190 IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFD----FSL-GVDSITIDPHKMGH-CPIPSGGI--LFKD 261 (397)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCS----GGG-TCSEEECCTTTTTC-CCSSCEEE--EESS
T ss_pred HHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccc----ccc-cCCeEEEccccccC-CCCCceEE--EEeC
Confidence 5668888999999999999998764321100 0001 122 44678899999775 78899999 7776
Q ss_pred hh
Q 017967 323 SD 324 (363)
Q Consensus 323 ~~ 324 (363)
+.
T Consensus 262 ~~ 263 (397)
T 3f9t_A 262 IG 263 (397)
T ss_dssp GG
T ss_pred HH
Confidence 66
No 110
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=1.2e-20 Score=180.83 Aligned_cols=191 Identities=16% Similarity=0.122 Sum_probs=142.7
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 199 (363)
+..+..++++++++++.. ++.|++ + +|++++.++. ...+.+||+|+++.|+|...... ++..|+
T Consensus 50 ~~~~~~~l~~~la~~~~~-------~~~i~~--~-sGt~a~~~~~--~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 117 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEGG-------AGAVLT--N-TGMSAIHLVT--TVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_dssp CCHHHHHHHHHHHHHHTC-------SEEEEE--S-SHHHHHHHHH--HHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSC
T ss_pred CCccHHHHHHHHHHHhCC-------CcEEEe--C-CHHHHHHHHH--HHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCC
Confidence 567889999999999743 245544 4 4599998883 33467999999999999875443 467899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++.+++ +++++++++|+||||.+++ +++|.++|+++|+++|+||+|..+....
T Consensus 118 ~~~~~~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 183 (386)
T 1cs1_A 118 RVLFVDQ-------GDEQALRAALAE---KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN- 183 (386)
T ss_dssp EEEEECT-------TCHHHHHHHHHT---CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EEEEeCC-------CCHHHHHHhhcc---CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9888875 288999999983 4567778999999999996 6777888999999999999999887542
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+. . ....+++.|+||.++.+|.|+ ||+ ++++++. ++.+...........+.+.+.++...+
T Consensus 184 -----~~----~-~~~di~~~s~sK~~~~~~~~~~G~~--~~~~~~l----~~~l~~~~~~~~~~~~~~~~~~~~~~l 245 (386)
T 1cs1_A 184 -----PL----A-LGADLVLHSCTKYLNGHSDVVAGVV--IAKDPDV----VTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_dssp -----GG----G-GTCSEEEEETTTTTTCSSCCCCEEE--EESSHHH----HHHHHHHHHHHTCBCCHHHHHHHHHHH
T ss_pred -----cc----c-cCceEEEEcCcccccCCCCceeEEE--EeCcHHH----HHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 11 1 246788999999999999998 999 7776563 444443333333456777777654443
No 111
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.87 E-value=7.5e-21 Score=182.70 Aligned_cols=192 Identities=15% Similarity=0.088 Sum_probs=144.7
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 199 (363)
+.....+|++++++++.. +++++ +.+|++|+.++ +..++.+||+|+++.|+|..+... ++..|+
T Consensus 57 ~~~~~~~l~~~la~~~g~--------~~~i~--~~sG~~ai~~~--~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 124 (389)
T 3acz_A 57 GNPTVEQFEEMVCSIEGA--------AGSAA--FGSGMGAISSS--TLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGI 124 (389)
T ss_dssp CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 356778999999999632 24544 67788998887 333467999999999999987665 578899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 279 (363)
+++.++. .|++.+++.++ ++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..+....
T Consensus 125 ~~~~v~~-------~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~- 190 (389)
T 3acz_A 125 EVDLIDT-------SDVEKVKAAWK---PNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK- 190 (389)
T ss_dssp EEEEECT-------TCHHHHHHTCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC-
T ss_pred EEEEECC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC-
Confidence 9999876 37899998886 35678888999999999997 6777888999999999999998776431
Q ss_pred CCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 280 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++ + ....+++.|+||.++.+|.|+ ||+ ++++++ +++.+.........+.+++.+.++...|+
T Consensus 191 -----~~----~-~~~di~~~S~sK~~~~~~~~~~G~v--~~~~~~----~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 253 (389)
T 3acz_A 191 -----PL----E-LGADIALHSVSKYINGHGDVIGGVS--SAKTAE----DIATIKFYRKDAGSLMAPMDAFLCARGMK 253 (389)
T ss_dssp -----GG----G-TTCSEEEEETTTTTTCSSCCCCEEE--EESSHH----HHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred -----cc----c-cCCeEEEECChhhccCCCCceeEEE--EECcHH----HHHHHHHHHHhcCCCCCHHHHHHHHcCcc
Confidence 11 1 246789999999999999999 999 776436 34444443332344566777776655554
No 112
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.87 E-value=2.1e-21 Score=186.82 Aligned_cols=200 Identities=21% Similarity=0.127 Sum_probs=151.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
++++|+.|.+. ..+.+.+++.+.+.. ..|.+..+..++++++++++.. +++++ +.+|+++
T Consensus 31 ~~id~~~~~~~-------~~~~v~~a~~~~~~~---~~y~~~~~~~~l~~~la~~~~~--------~~~v~--~~~Gt~a 90 (399)
T 2oga_A 31 PFLDLKAAYEE-------LRAETDAAIARVLDS---GRYLLGPELEGFEAEFAAYCET--------DHAVG--VNSGMDA 90 (399)
T ss_dssp CSCCHHHHHHH-------THHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHTTS--------SEEEE--ESCHHHH
T ss_pred cccccCcCCCC-------CCHHHHHHHHHHHhc---CCCCCchhHHHHHHHHHHHHCC--------CeEEE--ecCHHHH
Confidence 67899988752 126777777766643 2576778899999999999632 24555 7888999
Q ss_pred HHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 164 LRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 164 l~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
+.++ +..+ +.+||+|+++.|+|..+...++..|++++.++++ ++++.+|++.+++.+++ ++++++ ++|||
T Consensus 91 ~~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~n~t 161 (399)
T 2oga_A 91 LQLA--LRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPH-EDHPTLDPLLVEKAITP---RTRALL---PVHLY 161 (399)
T ss_dssp HHHH--HHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-SSSSSBCHHHHHHHCCT---TEEEEC---CBCGG
T ss_pred HHHH--HHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecC-CCCCCcCHHHHHHhcCC---CCeEEE---EeCCc
Confidence 8888 3444 5699999999999999999999999999999985 33578999999998863 455554 57999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC--ccccccccccceEEEEee
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVC 320 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~~l~G~RvG~i~~v~ 320 (363)
|...+ +++|.++|+++|+++|+||+|..+...+. .. . ... ..+++.|| ||.+|.+| |+||+ ++
T Consensus 162 G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~--~~--~----~~~-~di~~~S~~~sK~~~~~G-~~g~~--~~ 226 (399)
T 2oga_A 162 GHPAD---MDALRELADRHGLHIVEDAAQAHGARYRG--RR--I----GAG-SSVAAFSFYPGKNLGCFG-DGGAV--VT 226 (399)
T ss_dssp GCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETT--EE--T----TCT-TCEEEEECCTTSSSCCSS-CCEEE--EE
T ss_pred CCccC---HHHHHHHHHHcCCEEEEECcccccCccCC--ee--c----ccc-cCEEEEeCCCCccCCcCC-ceEEE--Ee
Confidence 99876 66777889999999999999986632111 11 1 111 24788888 89999779 99999 77
Q ss_pred CChhHHH
Q 017967 321 SSSDLAA 327 (363)
Q Consensus 321 ~~~~~~~ 327 (363)
++++.++
T Consensus 227 ~~~~~~~ 233 (399)
T 2oga_A 227 GDPELAE 233 (399)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 7677433
No 113
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.86 E-value=3.9e-21 Score=185.63 Aligned_cols=192 Identities=13% Similarity=0.069 Sum_probs=144.3
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 199 (363)
+..+..+|++++|+++... +.|++ .+|++|+.++ +. ++.+||+|+++.|+|...... ++..|+
T Consensus 65 ~~p~~~~l~~~la~~~g~~-------~~i~~---~sG~~ai~~~--~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 65 GNPTRNCLEKAVAALDGAK-------YCLAF---ASGLAATVTI--TH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp -CHHHHHHHHHHHHHHTCS-------EEEEE---SCHHHHHHHH--HT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred CCchHHHHHHHHHHHhCCC-------cEEEE---CCHHHHHHHH--HH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence 5577899999999997432 45544 4557898887 33 567999999999999875443 457899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC-CeEEEecCCCCCcCCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQGFASGS 278 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~-~~ii~De~y~~~~~~~ 278 (363)
+++.++.+ |++.++++++ ++++++++++|+||||.+++ +++|+++|+++| +++|+||+|..+.+..
T Consensus 132 ~v~~v~~~-------d~~~l~~~i~---~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~ 198 (403)
T 3cog_A 132 KISFVDCS-------KIKLLEAAIT---PETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR 198 (403)
T ss_dssp EEEEECTT-------SHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC
T ss_pred EEEEECCC-------CHHHHHHhcC---cCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC
Confidence 99999862 7899998886 35778888999999999997 677888899999 9999999999876532
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccccccc-cceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~-RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++ + ....++++|+||.++.+|. |+||+ ++++++ +++.+...........+.+.|.++...|+
T Consensus 199 ------~~----~-~~~div~~S~sK~~~g~~~~~~G~v--~~~~~~----l~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 261 (403)
T 3cog_A 199 ------PL----A-LGADISMYSATKYMNGHSDVVMGLV--SVNCES----LHNRLRFLQNSLGAVPSPIDCYLCNRGLK 261 (403)
T ss_dssp ------TT----T-TTCSEEEEETTTTTTCSSCCCCEEE--EECCHH----HHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ------cc----c-cCCeEEEEcChhhccCCCCCeEEEE--EECcHH----HHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 11 1 2467899999999987764 79999 776677 44444444333445677888887765554
Q ss_pred c
Q 017967 358 G 358 (363)
Q Consensus 358 ~ 358 (363)
.
T Consensus 262 ~ 262 (403)
T 3cog_A 262 T 262 (403)
T ss_dssp T
T ss_pred H
Confidence 3
No 114
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.86 E-value=5.3e-21 Score=185.28 Aligned_cols=217 Identities=11% Similarity=0.027 Sum_probs=148.3
Q ss_pred CCccccHHHHHHHHHHHccCCCCCCC--CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC
Q 017967 98 LQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~ 175 (363)
...+..+...+....+......+.|. +.....+|++.+++++.. +++++ +.||++|+.++ +..++.
T Consensus 51 s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~--------~~~~~--~~sG~~Ai~~a--l~~l~~ 118 (414)
T 3ndn_A 51 TSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGA--------PAAFA--TASGMAAVFTS--LGALLG 118 (414)
T ss_dssp CSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHTTCC
T ss_pred CCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHH--HHHHhC
Confidence 34455555544433332222223343 345567888888888532 46666 89999998877 445577
Q ss_pred CCCEEEEcCCCCcchHHHHh----hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHH
Q 017967 176 PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQW 251 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~ 251 (363)
+||+|+++.|+|..+...++ ..|++++.++.+ |++.+++++++ +++++++++|+||||.+.+ +
T Consensus 119 ~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~ai~~---~t~~v~le~p~NptG~~~~---l 185 (414)
T 3ndn_A 119 AGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-------DLSQWERALSV---PTQAVFFETPSNPMQSLVD---I 185 (414)
T ss_dssp TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------CHHHHHHHTSS---CCSEEEEESSCTTTCCCCC---H
T ss_pred CCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-------CHHHHHHhcCC---CCeEEEEECCCCCCCcccc---H
Confidence 99999999999999877764 499999999862 78999998873 4567778999999999976 6
Q ss_pred HHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHH
Q 017967 252 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 252 ~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~ 330 (363)
++|.++|+++|+++|+||+|....... + ... ...+++.|+||.++.+| +|+||+ +++ ++.+.
T Consensus 186 ~~i~~la~~~g~~livDe~~~~~~~~~------~----~~~-g~div~~S~sK~l~~~G~~~~G~v--v~~-~~~~~--- 248 (414)
T 3ndn_A 186 AAVTELAHAAGAKVVLDNVFATPLLQQ------G----FPL-GVDVVVYSGTKHIDGQGRVLGGAI--LGD-REYID--- 248 (414)
T ss_dssp HHHHHHHHHTTCEEEEECTTTHHHHCC------C----GGG-TCSEEEEETTTTTTCSSCCCCEEE--EEC-HHHHT---
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC------c----hhc-CCCeEeccCCccccCCCCceEEEE--EEC-HHHHH---
Confidence 677888999999999999987432211 0 111 23588999999999878 899999 765 44322
Q ss_pred HHHHhhhccccCCCchHHHHHHhccc
Q 017967 331 SQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 331 ~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+.++..........+.+.+.++...+
T Consensus 249 ~~l~~~~~~~g~~~~~~~a~~~~~~l 274 (414)
T 3ndn_A 249 GPVQKLMRHTGPAMSAFNAWVLLKGL 274 (414)
T ss_dssp THHHHHHHHHCCCCCHHHHHHHHHHG
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 13332222333455666666555443
No 115
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.86 E-value=1.5e-21 Score=186.76 Aligned_cols=211 Identities=13% Similarity=0.076 Sum_probs=149.7
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCC-cEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-RVAT 154 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~ 154 (363)
.+-..+..+++..|. ..+++.+.+++.+... ..|.+ ..+..++++++++++... ++ +|++
T Consensus 13 ~~~~~~~~~~~~~g~-------~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~~------~~~~i~~ 75 (393)
T 2huf_A 13 EPLVTPNKLLMGPGP-------SNAPQRVLDAMSRPIL----GHLHPETLKIMDDIKEGVRYLFQTN------NIATFCL 75 (393)
T ss_dssp SCCCCCCCEECSSSC-------CCCCHHHHHHTTSCCC----CTTSHHHHHHHHHHHHHHHHHHTCC------CSEEEEE
T ss_pred cccCCCCeEEecCCC-------CCCCHHHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHhCCC------CCcEEEE
Confidence 333444667766553 3356677777544332 12422 356789999999997432 33 7877
Q ss_pred EeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE
Q 017967 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (363)
|.||+++++++ +..++.+||+|++++|+|..+ ...++..|++++.++++ .++.+|++.+++.+++. ++++
T Consensus 76 --~~g~t~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~ 147 (393)
T 2huf_A 76 --SASGHGGMEAT--LCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSK--VGQSLSLDEIRDALLIH--KPSV 147 (393)
T ss_dssp --SSCHHHHHHHH--HHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHH--CCSE
T ss_pred --cCcHHHHHHHH--HHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCC--CCCCCCHHHHHHHHhcc--CCcE
Confidence 99999999998 444467999999999999874 34456789999999984 34679999999999741 3457
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccc-cccccc
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-LGLYAE 311 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~-~~l~G~ 311 (363)
+++++||||||.+++ +++|.++|+++|+++|+|+++. +.... . .+ ......+++.|+||. +|++|+
T Consensus 148 v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~-~~~~~--~---~~----~~~~~d~~~~s~sK~l~g~~G~ 214 (393)
T 2huf_A 148 LFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVAS-LGGAP--M---FM----DRWEIDAMYTGSQKVLGAPPGI 214 (393)
T ss_dssp EEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT-BTTBC--C---CT----TTTTCSEEECCSSSTTCCCSSC
T ss_pred EEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccc-cCCCC--c---ch----hhcCccEEEECCCcccccCCCe
Confidence 777999999999998 6778888999999999999964 22111 0 11 122456889999996 567887
Q ss_pred cceEEEEeeCChhHHHHHHHHHHh
Q 017967 312 RIGAMNVVCSSSDLAARVKSQLKR 335 (363)
Q Consensus 312 RvG~i~~v~~~~~~~~~~~~~l~~ 335 (363)
||+ +++ ++ +++.+..
T Consensus 215 --G~~--~~~-~~----~~~~~~~ 229 (393)
T 2huf_A 215 --TPV--SFS-HR----AVERYKR 229 (393)
T ss_dssp --EEE--EEC-HH----HHHHHHT
T ss_pred --EEE--EEC-HH----HHHHHhh
Confidence 999 665 66 4555543
No 116
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.86 E-value=3.8e-21 Score=185.49 Aligned_cols=205 Identities=12% Similarity=-0.006 Sum_probs=143.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC--CCCCC----CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
.++||+.+.|.+.. ..+.+.+++.+.+... ....| +......++++++++++.. +..++ +
T Consensus 60 ~~ld~~s~~~l~~~----~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~--~ 125 (409)
T 3kki_A 60 DDIILQSNDYLALA----NHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGF--------DECLL--S 125 (409)
T ss_dssp TSEECCCSCTTCCT----TCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTC--------SEEEE--E
T ss_pred ceEEeeccCccCCc----CCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCC--------CeEEE--e
Confidence 68888876553221 2456666666655331 11122 2223456899999998632 22333 4
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
.+|++++..+ +...+.+||.|+++.|+|..+...++..|++++.++. .|++.+++.+.+. +++++++++
T Consensus 126 ~sGt~a~~~~--l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~--~~~~vi~~~ 194 (409)
T 3kki_A 126 QSGWNANVGL--LQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRH--GPGIIVVDS 194 (409)
T ss_dssp SCHHHHHHHH--HHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHH--CSCEEEEES
T ss_pred cchHHHHHHH--HHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhc--CCeEEEECC
Confidence 6667887766 4555789999999999999999999999999888764 5899999999852 346888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccceEE
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
|+||||.+++ +++|.++|+++|+++|+||+|.+..++.. ........+. .+..+++.||||.++.+ .||+
T Consensus 195 ~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~---g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg~v 265 (409)
T 3kki_A 195 IYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPN---GAGLLAELGLTREVHFMTASLAKTFAYR---AGAI 265 (409)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG---GCCHHHHHTCGGGCSEEEEESSSTTCSS---CEEE
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCcchhhcCCCCCCCEEEeecchhhCCC---ceEE
Confidence 9999999998 77788889999999999999988554321 1111122121 23458899999999855 4988
Q ss_pred EEeeCChhH
Q 017967 317 NVVCSSSDL 325 (363)
Q Consensus 317 ~~v~~~~~~ 325 (363)
+++ ++.
T Consensus 266 --~~~-~~~ 271 (409)
T 3kki_A 266 --WCN-NEV 271 (409)
T ss_dssp --EES-SSG
T ss_pred --EEC-HHH
Confidence 665 553
No 117
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.86 E-value=3.2e-21 Score=185.57 Aligned_cols=189 Identities=16% Similarity=0.124 Sum_probs=138.7
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~ 199 (363)
+..+..++|+++|+++.. +++++ +.+|++|++++ +. ++.+||+|+++.|.|.+... .++..|+
T Consensus 53 ~~~~~~~lr~~la~~~g~--------~~~i~--~~sGt~a~~~a--l~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 119 (393)
T 1n8p_A 53 QNPNRENLERAVAALENA--------QYGLA--FSSGSATTATI--LQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGV 119 (393)
T ss_dssp CCHHHHHHHHHHHHHTTC--------SEEEE--ESCHHHHHHHH--HH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCS
T ss_pred CChhHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH--HH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 456788999999999633 23444 56679999888 44 56799999999999985544 4567899
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc----CCeEEEecCCCCCc
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK----NHIPFFDVAYQGFA 275 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~----~~~ii~De~y~~~~ 275 (363)
+++.++.+ | +.++++++ ++++++++++||||||.+++ +++|.++|+++ |+++|+|++|..+.
T Consensus 120 ~v~~v~~~-------d-~~l~~~i~---~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~ 185 (393)
T 1n8p_A 120 ETSFTNDL-------L-NDLPQLIK---ENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPY 185 (393)
T ss_dssp CCEEESSH-------H-HHHHHHSC---SSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHH
T ss_pred EEEEeCCC-------h-HHHHHhcc---cCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccc
Confidence 99999863 6 78888876 35778888999999999997 66777789999 99999999998776
Q ss_pred CCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccc-eEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhc
Q 017967 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLS 354 (363)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~ 354 (363)
..+ . .+. ...+++.|+||.+|.+|+|+ ||+ ++.+++.++ .+....+......+...+.++..
T Consensus 186 ~~~----~------~~~-~~di~~~S~sK~~g~~G~rigG~~--~~~~~~~~~----~l~~~~~~~g~~~~~~~~~~~~~ 248 (393)
T 1n8p_A 186 ISN----P------LNF-GADIVVHSATKYINGHSDVVLGVL--ATNNKPLYE----RLQFLQNAIGAIPSPFDAWLTHR 248 (393)
T ss_dssp HCC----G------GGG-TCSEEEEETTTTTTCSSCCCCEEE--EESCHHHHH----HHHHHHHHHCCCCCHHHHHHHHH
T ss_pred cCC----H------HHc-CCeEEEEECcccccCCCCceeEEE--EeCCHHHHH----HHHHHHHhcCCCCCHHHHHHHHh
Confidence 431 1 111 36789999999999999999 998 765566444 44333332233445555555443
Q ss_pred cc
Q 017967 355 SM 356 (363)
Q Consensus 355 ~l 356 (363)
.+
T Consensus 249 ~l 250 (393)
T 1n8p_A 249 GL 250 (393)
T ss_dssp HH
T ss_pred cc
Confidence 33
No 118
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.86 E-value=5.5e-21 Score=183.78 Aligned_cols=204 Identities=14% Similarity=-0.007 Sum_probs=148.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC---CCCCC----CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
+.+.|..+.+ +.+++.+.+++.+.+.... ...|. ...+..++++++++++.. ++++|++
T Consensus 26 ~~~~ld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~-- 91 (406)
T 3cai_A 26 GWVHFDAPAG------MLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNA------DPGGVVL-- 91 (406)
T ss_dssp SCEECBGGGC------CCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTC------CGGGEEE--
T ss_pred CeEEEeCCCc------CCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--
Confidence 4788887764 2346677777766653211 01232 245678999999999743 3578988
Q ss_pred ccchhHHHHHHHHHHH-HhCCCCEEEEcCCCCcchHHHHhh----CCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 157 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 157 t~ggt~al~l~~~l~~-~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
|.|+++++.++...+. .+.+||+|+++.|+|..+...+.. .|++++.++++ ++++.+|++.|++.++ ++++
T Consensus 92 ~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~l~---~~~~ 167 (406)
T 3cai_A 92 GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVD-IETGELPTWQWESLIS---KSTR 167 (406)
T ss_dssp ESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCC-TTTCCCCGGGHHHHCC---TTEE
T ss_pred eCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecC-cccCCcCHHHHHHHhC---CCce
Confidence 9999999988833221 157999999999999887555443 79999999984 2456789999999886 3577
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~ 311 (363)
++++++|+||||.+++ +++|.++|+++|+++|+|++|..-... . ....+ ...+++.|+||.+| ++
T Consensus 168 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~---~---~~~~~----~~d~~~~s~~K~~g-~~- 232 (406)
T 3cai_A 168 LVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYRL---L---DIRET----DADVVTVNAHAWGG-PP- 232 (406)
T ss_dssp EEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTCC---C---CHHHH----CCSEEEEEGGGGTS-CS-
T ss_pred EEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCCC---C---Cchhc----CCCEEEeehhhhcC-CC-
Confidence 8888999999999998 567788899999999999998742211 1 12221 35688999999876 54
Q ss_pred cce-EEEEeeCChh
Q 017967 312 RIG-AMNVVCSSSD 324 (363)
Q Consensus 312 RvG-~i~~v~~~~~ 324 (363)
+| |+ +++ ++
T Consensus 233 -~G~~~--~~~-~~ 242 (406)
T 3cai_A 233 -IGAMV--FRD-PS 242 (406)
T ss_dssp -CEEEE--ESC-HH
T ss_pred -cCeEE--EEe-hH
Confidence 99 88 665 55
No 119
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.86 E-value=7.9e-21 Score=181.95 Aligned_cols=190 Identities=11% Similarity=0.046 Sum_probs=138.3
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCC--cchHHHHHHHHHHHhcCCCCcccCC-cEEEEeccchhHHHHHHHHHHHHhCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFP 176 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~al~l~~~l~~~~~~ 176 (363)
..+++.+.+++.+.. ...|.+. ....++|+++++++... ++ +|++ |.||++++.++ +..++.+
T Consensus 27 ~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~~~~------~~~~v~~--~~g~t~al~~~--~~~~~~~ 92 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTV----LSNFHAELFRTMDEVKDGLRYIFQTE------NRATMCV--SGSAHAGMEAM--LSNLLEE 92 (396)
T ss_dssp CCCCHHHHHHTTSCC----CCTTCHHHHHHHHHHHHHHHHHHTCC------CSCEEEE--SSCHHHHHHHH--HHHHCCT
T ss_pred CCCCHHHHHHhcccc----ccCCChhHHHHHHHHHHHHHHHhCCC------CCcEEEE--CCcHHHHHHHH--HHHhcCC
Confidence 345677777654322 1235442 23789999999997542 45 7877 99999999988 4444679
Q ss_pred CCEEEEcCCCCcchH--HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 177 GAKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 177 gd~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
||+|++++|+|..+. ..++..|++++.++++ .++.+|++.+++.+++. +++++++++||||||.+++ +++|
T Consensus 93 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i 165 (396)
T 2ch1_A 93 GDRVLIAVNGIWAERAVEMSERYGADVRTIEGP--PDRPFSLETLARAIELH--QPKCLFLTHGDSSSGLLQP---LEGV 165 (396)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTSCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CTTH
T ss_pred CCeEEEEcCCcccHHHHHHHHHcCCceEEecCC--CCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCceecC---HHHH
Confidence 999999999999985 4778899999999984 35779999999999741 3557778999999999998 6678
Q ss_pred HHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
.++|+++|+++|+||+|. +.... . .+ ......+++.|++|.++ .+.++||+ +++ ++
T Consensus 166 ~~l~~~~~~~li~Dea~~-~g~~~--~---~~----~~~~~d~~~~s~~K~~~-~~~g~g~~--~~~-~~ 221 (396)
T 2ch1_A 166 GQICHQHDCLLIVDAVAS-LCGVP--F---YM----DKWEIDAVYTGAQKVLG-APPGITPI--SIS-PK 221 (396)
T ss_dssp HHHHHHTTCEEEEECTTT-BTTBC--C---CT----TTTTCCEEECCCC-CCC-CCSSCEEE--EEC-HH
T ss_pred HHHHHHcCCEEEEEcccc-ccCCc--c---ch----hhcCcCEEEEcCCcccc-CCCCeEEE--EEC-HH
Confidence 888999999999999987 32111 0 11 11122356689999775 44567998 665 55
No 120
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=2.2e-21 Score=182.62 Aligned_cols=222 Identities=14% Similarity=0.017 Sum_probs=149.1
Q ss_pred CccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCC
Q 017967 99 QPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 178 (363)
Q Consensus 99 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd 178 (363)
+..+++.+.+++.+.... . ..|....+..++|+++++++.. +++++++ |.||+++++++ +..++.+||
T Consensus 9 p~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~la~~~g~------~~~~i~~--~~g~t~a~~~~--~~~~~~~gd 76 (352)
T 1iug_A 9 PVRLHPKALEALARPQLH-H-RTEAAREVFLKARGLLREAFRT------EGEVLIL--TGSGTLAMEAL--VKNLFAPGE 76 (352)
T ss_dssp SCCCCHHHHHHHHSCCCC-T-TSHHHHHHHHHHHHHHHHHHTC------SSEEEEE--ESCHHHHHHHH--HHHHCCTTC
T ss_pred CCCCCHHHHHHhccCCCC-c-cCHHHHHHHHHHHHHHHHHhCC------CCceEEE--cCchHHHHHHH--HHhccCCCC
Confidence 344567888877654421 1 1121234678999999999743 2578877 99999999988 444467999
Q ss_pred EEEEcCCCCcchH--HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHH
Q 017967 179 KVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (363)
Q Consensus 179 ~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~ 256 (363)
+|+++.|+|+.+. ..++..|++++.++++ .++.+|++.+++ ++++++++++||||||.+++ +++|.+
T Consensus 77 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~------~~~~~v~~~~~~nptG~~~~---l~~i~~ 145 (352)
T 1iug_A 77 RVLVPVYGKFSERFYEIALEAGLVVERLDYP--YGDTPRPEDVAK------EGYAGLLLVHSETSTGALAD---LPALAR 145 (352)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCTTTSCC------SSCSEEEEESEETTTTEECC---HHHHHH
T ss_pred eEEEEeCCchhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHhc------cCCcEEEEEEecCCcceecC---HHHHHH
Confidence 9999999998865 4556789999999984 345688888876 23557788999999999998 567788
Q ss_pred HHHhc--CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc-ccccccccceEEEEeeCChhHHHH-----
Q 017967 257 VIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK-NLGLYAERIGAMNVVCSSSDLAAR----- 328 (363)
Q Consensus 257 ~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~l~G~RvG~i~~v~~~~~~~~~----- 328 (363)
+|+++ |+++|+||+|..... . .+ . ......+++.|+|| .++.+| +||+ +++ ++.+++
T Consensus 146 l~~~~~~~~~li~D~a~~~~~~-~--~~---~----~~~~~d~~~~s~~K~~~~~~g--~G~~--~~~-~~~~~~~~~~~ 210 (352)
T 1iug_A 146 AFKEKNPEGLVGADMVTSLLVG-E--VA---L----EAMGVDAAASGSQKGLMCPPG--LGFV--ALS-PRALERLKPRG 210 (352)
T ss_dssp HHHHHCTTCEEEEECTTTBTTB-C--CC---S----GGGTCSEEEEESSSTTCCCSC--EEEE--EEC-HHHHHTCCCCS
T ss_pred HHHhhCCCCEEEEECCccccCc-c--ee---c----cccCeeEEEecCcccccCCCc--eeEE--EEC-HHHHHHhhCCC
Confidence 89999 999999999862111 0 01 1 11134578999999 454334 7999 665 553333
Q ss_pred ----HHHHHHhh-hccccCCCchHHHHHHhccccc
Q 017967 329 ----VKSQLKRL-ARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 329 ----~~~~l~~~-~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+...+... ......+++...+.++...|+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 245 (352)
T 1iug_A 211 YYLDLARELKAQKEGESAWTPAINLVLAVAAVLEE 245 (352)
T ss_dssp STTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH
T ss_pred ceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 22111111 1223345667777666555544
No 121
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.86 E-value=4.9e-21 Score=183.09 Aligned_cols=221 Identities=14% Similarity=0.081 Sum_probs=149.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
+++|++.|.+ ++.+++.+.+++. .|.. ...+.+.+++++....+.. +++++++ +.||+++
T Consensus 29 ~v~~~~~~~~-----~~~~~~~v~~a~~---------~~~~---~~~~~~~~~~~~a~~~g~~-~~~~~~~--~~ggt~a 88 (374)
T 2aeu_A 29 ALYDLSGLSG-----GFLIDEKDKALLN---------TYIG---SSYFAEKVNEYGLKHLGGD-ENDKCVG--FNRTSSA 88 (374)
T ss_dssp GCEECSSCCC-----CCCCCHHHHHHHT---------STTH---HHHHHHHHHHHHHHHHTCC-TTEEEEE--ESSHHHH
T ss_pred ceeeecccCC-----CCCCCHHHHHHHH---------HhcC---chHHHHHHHHHHHHHhCCC-CcceEEE--EcChHHH
Confidence 4789988764 2456777777753 1211 1233344443332212221 2467877 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHH---HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE-EEEcCCC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI-LLHGCAH 239 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~-~~i~~p~ 239 (363)
+.++. . .+ +||+|+++.|+|.++.. .++..|++++.+ .|++.+++. + +++++ +++++||
T Consensus 89 ~~~~~--~-~~-~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~---~~~~~~v~~~~p~ 151 (374)
T 2aeu_A 89 ILATI--L-AL-KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-I---DKDTLVIITGSTM 151 (374)
T ss_dssp HHHHH--H-HH-CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-C---CTTEEEEEECBCT
T ss_pred HHHHH--H-hC-CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-C---CCccEEEEEccCC
Confidence 98883 3 34 99999999998877544 567889988877 278888876 3 34667 8889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEe
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||||. +..++++|.++|+++|+++|+||+|..+..+.. . ..+.. .. ...++++||||.+ +|+|+||+ +
T Consensus 152 nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~-~~~~~---~~-~~di~~~S~sK~l--~g~~~G~~--~ 219 (374)
T 2aeu_A 152 DLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLF-N-QPPAL---KL-GADLVVTSTDKLM--EGPRGGLL--A 219 (374)
T ss_dssp TSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT-T-CCCHH---HH-TCSEEEEETTSSS--SSCSCEEE--E
T ss_pred CCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccc-c-cCCcc---cc-CCcEEEecCcccc--cCcceEEE--E
Confidence 99998 789999999999999999999999877641000 0 00011 11 2358889999985 58999999 6
Q ss_pred eCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 320 CSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++ ++ +++.++........+++.+.|.++...|+.
T Consensus 220 ~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~al~~ 253 (374)
T 2aeu_A 220 GK-KE----LVDKIYIEGTKFGLEAQPPLLAGIYRALKN 253 (374)
T ss_dssp EE-HH----HHHHHHHHHHTTTCBCCHHHHHHHHHHHHH
T ss_pred EC-HH----HHHHHHHhhccccCCCCHHHHHHHHHHHHH
Confidence 65 66 455555444333446788888887766543
No 122
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.86 E-value=1.1e-20 Score=183.38 Aligned_cols=200 Identities=18% Similarity=0.075 Sum_probs=151.2
Q ss_pred EeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC-CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
+|+.|.|. ...++.+.+++.+.+... .|.+ ..+..+||+++++++.. +++++ |.||+++++
T Consensus 20 ~l~~~~p~-----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~ 81 (424)
T 2po3_A 20 PLLVGRPN-----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAGV--------RHAVA--TCNATAGLQ 81 (424)
T ss_dssp CEETTCCC-----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHH
T ss_pred cccccCCC-----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHH
Confidence 68888762 112466777776666442 4766 68999999999999732 47877 999999999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC
Q 017967 166 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (363)
Q Consensus 166 l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~ 245 (363)
++... +.+||+|++++|+|..+...++..|++++.+++++ +++.+|++.+++.+++ ++++++++ ||||..
T Consensus 82 ~~l~~---l~~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~---~~~~v~~~---~~tG~~ 151 (424)
T 2po3_A 82 LLAHA---AGLTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTP---RTSAVVGV---HLWGRP 151 (424)
T ss_dssp HHHHH---HTCCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCT---TEEEEEEE---CGGGCC
T ss_pred HHHHH---cCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCc---CCcEEEEE---CCCCCc
Confidence 88433 34899999999999999999999999999999853 4678999999988763 45566653 489986
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 246 PTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 246 ~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
. ++++|.++|+++|+++|+||+|. ++.+++. ++ ....+ +++.||||..+++|+|+||+ ++++++
T Consensus 152 ~---~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-----~~----~~~~d-i~~~S~sk~K~l~~~~~G~~--v~~~~~ 216 (424)
T 2po3_A 152 C---AADQLRKVADEHGLRLYFDAAHALGCAVDGR-----PA----GSLGD-AEVFSFHATKAVNAFEGGAV--VTDDAD 216 (424)
T ss_dssp C---CHHHHHHHHHHTTCEEEEECTTCTTCEETTE-----ET----TSSSS-EEEEECCTTSSSCCSSCEEE--EESCHH
T ss_pred C---CHHHHHHHHHHcCCEEEEECccccCCeECCe-----ec----ccccC-EEEEeCCCCCCccCCCCeEE--EeCCHH
Confidence 4 67778888999999999999998 5765421 11 11123 88999996667778999999 787677
Q ss_pred HHHHH
Q 017967 325 LAARV 329 (363)
Q Consensus 325 ~~~~~ 329 (363)
.++++
T Consensus 217 l~~~l 221 (424)
T 2po3_A 217 LAARI 221 (424)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 43333
No 123
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.86 E-value=1.2e-20 Score=179.50 Aligned_cols=198 Identities=15% Similarity=0.046 Sum_probs=144.2
Q ss_pred CCCCCccccHHHHHHHHHHHccC--CCC-CCCC----CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHH
Q 017967 95 TEELQPYVLDVVKKAENLMLERG--ENK-EYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 167 (363)
Q Consensus 95 ~~~~~~~~~~~v~~a~~~~~~~~--~~~-~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~ 167 (363)
|..+...+++.+.+++.+.+... ... .|.. ..+..++++++++++.. +++++++ |.||++|+.++
T Consensus 5 d~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~--~~g~t~a~~~~ 76 (382)
T 4eb5_A 5 DYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG------GGGTVVF--TSGATEANNLA 76 (382)
T ss_dssp BTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTC------TTEEEEE--ESSHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCC------CCCeEEE--cCchHHHHHHH
Confidence 33444567788888887766431 101 1422 24678899999999742 2568877 99999999998
Q ss_pred HHHHHH--hCCCCEEEEcCCCCcchHHHHh---hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 168 AALIER--YFPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 168 ~~l~~~--~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
...+.. ..+||.|++++|+|+.+...+. ..|++++.++++ .++.+|++.+++.+++ +++++++++|+|||
T Consensus 77 ~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~v~~~~~~npt 151 (382)
T 4eb5_A 77 IIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRD---DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC--TTSCBCHHHHHHHCCT---TEEEEECCSBCTTT
T ss_pred HHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccC--CCCccCHHHHHHHhcC---CCeEEEEeccCCCc
Confidence 443321 1699999999999998876654 479999999984 3567999999998863 46788899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
|.+++ +++|.++|+++|++ |+|++|. +.... ..+..+ +..+++.||||.+|.+| +||+ ++++
T Consensus 152 G~~~~---l~~i~~l~~~~~~~-i~D~a~~-~g~~~-----~~~~~~----~~di~~~s~sK~~g~~g--~G~~--~~~~ 213 (382)
T 4eb5_A 152 GTIQP---VEEISEVLAGKAAL-HIDATAS-VGQIE-----VDVEKI----GADMLTISSNDIYGPKG--VGAL--WIRK 213 (382)
T ss_dssp CBBCC---HHHHHHHHTTSSEE-EEECTTT-BTTBC-----CCHHHH----TCSEEEEETGGGTCCSS--CEEE--EEET
T ss_pred cccCC---HHHHHHHHHHCCCE-EEEcchh-cCCcc-----cCcccc----CCCEEEeehHHhcCCCc--eEEE--EEcc
Confidence 99998 46788889999999 9999987 22110 112211 35688999999988666 6998 6654
Q ss_pred h
Q 017967 323 S 323 (363)
Q Consensus 323 ~ 323 (363)
+
T Consensus 214 ~ 214 (382)
T 4eb5_A 214 E 214 (382)
T ss_dssp T
T ss_pred c
Confidence 3
No 124
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.86 E-value=2.9e-21 Score=183.84 Aligned_cols=199 Identities=15% Similarity=0.025 Sum_probs=143.4
Q ss_pred CccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCC
Q 017967 99 QPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 178 (363)
Q Consensus 99 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd 178 (363)
+..+++.+.+++.+.... . ..+.......++++++++++... .++++|++ |.||++++. + +..++.+||
T Consensus 10 p~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~~~~~la~~~~~~----~~~~~v~~--~~g~t~al~-~--~~~~~~~gd 78 (384)
T 3zrp_A 10 PTTIKEDVLVAGLENNVG-F-TSKEFVEALAYSLKGLRYVMGAS----KNYQPLII--PGGGTSAME-S--VTSLLKPND 78 (384)
T ss_dssp CSCCCHHHHHHTTCCSCC-T-TSHHHHHHHHHHHHHHHHHHTCC----TTSEEEEE--ESCHHHHHH-H--GGGGCCTTC
T ss_pred CCCCCHHHHHHhhccccc-c-ccHHHHHHHHHHHHHHHHHhCCC----CCCcEEEE--cCCcHHHHH-H--HHhhcCCCC
Confidence 344567777765432211 0 11112345678889999986432 12277877 999999998 6 445577999
Q ss_pred EEEEcCCCCcc--hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHH
Q 017967 179 KVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (363)
Q Consensus 179 ~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~ 256 (363)
+|++++|+|.. +...++..|++++.++++ .++.+|++.+++.+++ .+++++++++||||||.+++ +++|.+
T Consensus 79 ~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~~ 151 (384)
T 3zrp_A 79 KILVVSNGVFGDRWEQIFKRYPVNVKVLRPS--PGDYVKPGEVEEEVRK--SEYKLVALTHVETSTGVREP---VKDVIN 151 (384)
T ss_dssp EEEEECSSHHHHHHHHHHTTSSCEEEEECCS--TTCCCCHHHHHHHHHH--SCEEEEEEESEETTTTEECC---HHHHHH
T ss_pred EEEEecCCcchHHHHHHHHHcCCcEEEecCC--CCCCCCHHHHHHHHHh--CCCcEEEEeCCCCCCceECc---HHHHHH
Confidence 99999999955 666778899999999984 3567999999999985 24778888999999999998 566888
Q ss_pred HHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHH
Q 017967 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
+|+++|+++|+|++|....... . .......+++.|+||.++ .+.++||+ +++ ++.++++
T Consensus 152 l~~~~~~~li~D~a~~~~~~~~------~----~~~~~~d~~~~s~~K~~~-~~~g~g~~--~~~-~~~~~~~ 210 (384)
T 3zrp_A 152 KIRKYVELIVVDGVSSVGAEEV------K----AEEWNVDVYLTASQKALG-SAAGLGLL--LLS-PKALSIL 210 (384)
T ss_dssp HHGGGEEEEEEECTTTTTTSCC------C----TTTTTCSEEEEETTSTTC-CCSSEEEE--EEC-HHHHHHH
T ss_pred HHHhcCCEEEEECcccccCccc------c----ccccCCCEEEecCccccc-CCCceEEE--EEC-HHHHHHh
Confidence 8999999999999976443210 0 112245688999999885 34558999 665 6654444
No 125
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.86 E-value=3e-21 Score=184.99 Aligned_cols=238 Identities=12% Similarity=0.106 Sum_probs=161.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC-CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|++.+.+...-+. ..+.+.+++.+...... ...+.+..-..++++.+++++. .+++++ ++||++
T Consensus 37 ~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~v~~--~~~gt~ 104 (392)
T 3ruy_A 37 RYMDLLSAYSAVNQGH--RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--------KEMVLP--MNTGAE 104 (392)
T ss_dssp EEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--------CSEEEE--ESSHHH
T ss_pred EEEEcCCChhhhccCC--CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--------CCEEEE--eCcHHH
Confidence 6889988754322222 35677777776654321 1111234456788888888852 378888 999999
Q ss_pred HHHHHHHHHHHh--------CCCCEEEEcCCCCcchHHHHhhCCC-------------CeEEEecccCCCCCCCHHHHHH
Q 017967 163 SLRLAAALIERY--------FPGAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 163 al~l~~~l~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
|++++..++... ..||+|++..|+|.++...+...+. .+..++. .|++.+++
T Consensus 105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 177 (392)
T 3ruy_A 105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence 999885543322 2368999999999776554443322 1333332 27999999
Q ss_pred HHHcCCCCcEEEEEcCCCCCCCCCCCHHH-HHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEE
Q 017967 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~p~NPTG~~~s~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 300 (363)
+++ ++++++++++||||||.+++.++ +++|.++|+++|+++|+||+|.+|...+. ..... ..+...+++
T Consensus 178 ~l~---~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~---~~~~~-~~~~~~d~~--- 247 (392)
T 3ruy_A 178 AIT---PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK---VFACD-WDNVTPDMY--- 247 (392)
T ss_dssp HCC---TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS---SSGGG-GGTCCCSEE---
T ss_pred Hhc---cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc---chhhh-ccCCCCCEE---
Confidence 886 45788888999999999996655 99999999999999999999988866432 11111 112223443
Q ss_pred cCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 301 SYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 301 S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
+|||.++ +| +|+||+ +++ ++ +++.+........++.+.++|.++...|+.
T Consensus 248 ~~SK~l~-gG~~~~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 298 (392)
T 3ruy_A 248 ILGKALG-GGVFPISCA--AAN-RD----ILGVFEPGSHGSTFGGNPLACAVSIAALEV 298 (392)
T ss_dssp EECGGGG-TTTSCCEEE--EEC-HH----HHTTCCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred EEchhhh-CChhhhEEE--EEC-HH----HHhhhccCCcCCCCCCCHHHHHHHHHHHHH
Confidence 7789876 46 999999 665 55 555555554555668889999988776653
No 126
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.86 E-value=7.1e-21 Score=182.55 Aligned_cols=245 Identities=15% Similarity=0.106 Sum_probs=159.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|++.|.+...-+ +.++.+.+++.+.+.... ...| +.....++++++++++. ..+++|++ |.||+
T Consensus 46 ~~ld~~~~~~~~~~g--~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~------~~~~~v~~--~~gg~ 114 (395)
T 1vef_A 46 EYIDCVGGYGVANLG--HGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAILP------PELNRVFP--VNSGT 114 (395)
T ss_dssp EEEESSHHHHTCTTC--BTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTSC------TTEEEEEE--ESSHH
T ss_pred EEEEccCccccccCC--CCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhcC------CCcCEEEE--cCcHH
Confidence 578998886422222 246677777766653311 1124 45566788888887742 13578877 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcc-hHHHHhhCCCCeEE---EecccCCC--CCCCHHHHHHHHHcCCCCcEEEEE
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGN-HKNIFNDARVPWSE---YRYYDPKT--VGLDFEGMIADIKAAPGGSFILLH 235 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~~G~~~~~---v~~~~~~~--~~~d~~~l~~~l~~~~~~~~~~~i 235 (363)
+|+.++...+..+.+||.|++.+|+|.. +...+...|.+.+. +|+..+.. ...|++.+++.++ ++++++++
T Consensus 115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~---~~~~~v~~ 191 (395)
T 1vef_A 115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVD---EETAAVIL 191 (395)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCC---TTEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhc---cCEEEEEE
Confidence 9999885433223578999999999965 44566666765221 11100000 0248999999886 34667766
Q ss_pred cCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccce
Q 017967 236 GCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 236 ~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
+.++||||..+ +.+++++|.++|+++|+++|+||+|.++...+. ...+. ......+++ ||||.++. |+|+|
T Consensus 192 ~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~---~~~~~-~~~~~~d~~---s~sK~~~~-g~~~G 263 (395)
T 1vef_A 192 EPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK---RFAFE-HFGIVPDIL---TLAKALGG-GVPLG 263 (395)
T ss_dssp CSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSTHH-HHTCCCSEE---EECGGGGT-TSSCE
T ss_pred eCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc---hhHhh-hcCCCCCEE---EEcccccC-CCceE
Confidence 66689999865 788899999999999999999999998754321 11121 123233443 88999995 99999
Q ss_pred EEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 315 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 315 ~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|+ +++ ++ +++.+.........+++.++|.++...|+
T Consensus 264 ~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~~a~~~al~ 299 (395)
T 1vef_A 264 VA--VMR-EE----VARSMPKGGHGTTFGGNPLAMAAGVAAIR 299 (395)
T ss_dssp EE--EEE-HH----HHHTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred EE--Eeh-HH----HHhhhccCCcCCCcCCCHHHHHHHHHHHH
Confidence 99 765 44 44444332223344678888877765554
No 127
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.85 E-value=1.8e-21 Score=183.89 Aligned_cols=202 Identities=14% Similarity=0.022 Sum_probs=143.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC-C-cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-I-EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~-~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
++++|+.| |. ..++.+.+++.+. ..+.|.. . .+..++|+++++++. . +.+++++++ |.||+
T Consensus 4 ~~~~~~~g-p~------~~~~~v~~a~~~~----~~~~~~~~~~~~~~~l~~~la~~~g-~---~~~~~~v~~--~~g~t 66 (366)
T 1m32_A 4 NYLLLTPG-PL------TTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTALAT-A---SEGYTSVLL--QGSGS 66 (366)
T ss_dssp -CEECSSS-SC------CCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHHHC-S---SSSEEEEEE--ESCHH
T ss_pred ccccccCC-Cc------CCCHHHHHHHhhh----hcCCCHHHHHHHHHHHHHHHHHHhC-C---CCcCcEEEE--ecChH
Confidence 36788877 31 2456677665332 1122211 1 678999999999974 2 122357877 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcC-CCCcc-hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCC
Q 017967 162 GSLRLAAALIERYFPGAKVLISS-PTWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~-P~y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~ 239 (363)
++++++ +..++.+||+|++.+ ++|+. +...++..|++++.++++ .++.+|++.+++.+++.+ +++++++++|+
T Consensus 67 ~a~~~~--~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~ 141 (366)
T 1m32_A 67 YAVEAV--LGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCG--EVARPDVQAIDAILNADP-TISHIAMVHSE 141 (366)
T ss_dssp HHHHHH--HHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECC--TTSCCCHHHHHHHHHHCT-TCCEEEEESEE
T ss_pred HHHHHH--HHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCC-CeEEEEEeccc
Confidence 999988 344457999988776 56654 667778889999999984 356799999999998632 35567789999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEe
Q 017967 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (363)
Q Consensus 240 NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v 319 (363)
||||.+++ +++|.++|+++|+++|+||+|...... . .+ ......+++.|+||.++ .+.++||+ +
T Consensus 142 nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~-----~~----~~~~~di~~~s~~K~~~-~~~g~G~~--~ 205 (366)
T 1m32_A 142 TTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGIP-M-----DI----AALHIDYLISSANKCIQ-GVPGFAFV--I 205 (366)
T ss_dssp TTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C-----CT----TTTTCSEEEEESSSTTC-CCSSEEEE--E
T ss_pred CCcceecC---HHHHHHHHHHcCCEEEEECCccccCcC-c-----cc----cccCccEEEecCccccc-CCCceEEE--E
Confidence 99999998 567888899999999999998754321 0 11 12235688999999774 23457999 6
Q ss_pred eCChh
Q 017967 320 CSSSD 324 (363)
Q Consensus 320 ~~~~~ 324 (363)
++ ++
T Consensus 206 ~~-~~ 209 (366)
T 1m32_A 206 AR-EQ 209 (366)
T ss_dssp EE-HH
T ss_pred EC-HH
Confidence 65 55
No 128
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.85 E-value=2.4e-20 Score=182.96 Aligned_cols=220 Identities=10% Similarity=0.069 Sum_probs=150.9
Q ss_pred CcEEeecccc-CCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAY-RTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+.++|+.|.. .|..... ..+.+.++..+.+.... ..|.+..+..+|++++++++.. +++++ |+||++
T Consensus 35 ~~~~~~~g~~ylD~~~~~-~~~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~~--------~~v~~--t~ggt~ 102 (467)
T 1ax4_A 35 NPFLLPSSAVYIDLLTDS-GTNAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFNY--------DYIIP--AHQGRG 102 (467)
T ss_dssp CGGGSCGGGCSEECSCSS-SCCCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHCC--------CEEEE--ESSHHH
T ss_pred CcccCCCCceeeecccCc-CCHHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcCC--------CcEEE--cCCcHH
Confidence 5566666652 2221111 11444444444433333 4688888999999999999732 57877 999999
Q ss_pred HHHHHHHHHHHhC----CCCE---EEEcCCCCcchHHHHhhCCCCeEEEeccc---C-----CCCCCCHHHHHHHHHcCC
Q 017967 163 SLRLAAALIERYF----PGAK---VLISSPTWGNHKNIFNDARVPWSEYRYYD---P-----KTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 163 al~l~~~l~~~~~----~gd~---Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~---~-----~~~~~d~~~l~~~l~~~~ 227 (363)
|++++.. ..+. +||. |+++.+.|..+...+...|.+++.++... . .++.+|++.|++++++..
T Consensus 103 A~~~al~--~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~ 180 (467)
T 1ax4_A 103 AENILFP--VLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG 180 (467)
T ss_dssp HHHHHHH--HHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC
T ss_pred HHHHHHH--HHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC
Confidence 9998844 3455 8998 99998888888888888999888776431 1 135689999999997421
Q ss_pred -CCcEEEEEcCCCCCC-CCCCCHHHHHHHHHHHHhcCCeEEEecCCCC----------CcCCCCCCchhHHHHHH----h
Q 017967 228 -GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG----------FASGSLDNDASSVRLFA----T 291 (363)
Q Consensus 228 -~~~~~~~i~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~----------~~~~~~~~~~~~~~~~~----~ 291 (363)
++++++++++||||| |.+++.+++++|+++|++||+++|+|+++.. ..+.+. ++..+. .
T Consensus 181 ~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 255 (467)
T 1ax4_A 181 ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA-----TIKEVIFDMYK 255 (467)
T ss_dssp GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC-----CHHHHHHHHGG
T ss_pred CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC-----chhhhhhhhcc
Confidence 247788889999999 8999999999999999999999999998432 012211 121221 1
Q ss_pred cCCeEEEEEcCccccccccccc-eEEEEeeCCh-hHHHHH
Q 017967 292 RGMELLVAQSYSKNLGLYAERI-GAMNVVCSSS-DLAARV 329 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G~Rv-G~i~~v~~~~-~~~~~~ 329 (363)
.. + +++.|+||.+|++ + ||+ +++++ +.++++
T Consensus 256 ~~-d-~~~~s~sK~~g~~---~Gg~~--~~~d~~~l~~~~ 288 (467)
T 1ax4_A 256 YA-D-ALTMSAKKDPLLN---IGGLV--AIRDNEEIFTLA 288 (467)
T ss_dssp GC-S-EEEEETTSTTCCS---SCEEE--EESSCHHHHHHH
T ss_pred cc-c-eEEEeccccCCCC---cceEE--EeCCHHHHHHHH
Confidence 22 2 4568999998765 4 555 55656 644444
No 129
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.85 E-value=2e-20 Score=179.04 Aligned_cols=190 Identities=17% Similarity=0.128 Sum_probs=144.5
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA 178 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd 178 (363)
|.+.+.+.+++.+.+.... ..|.+..+..++|+++++++.. ++.|++ ++ |++|++++ +..+ +.+||
T Consensus 13 p~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~~~-------~~~i~~--~s-Gt~al~~~--l~~l~~~~gd 79 (388)
T 1b9h_A 13 PQYDDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHGA-------AHALAV--TN-GTHALELA--LQVMGVGPGT 79 (388)
T ss_dssp SCCCHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTTC-------SEEEEE--SC-HHHHHHHH--HHHTTCCTTC
T ss_pred CCCCHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHhCC-------CeEEEe--CC-HHHHHHHH--HHHcCCCCcC
Confidence 3445788888877775432 4677788999999999999633 245555 55 49999888 4444 56999
Q ss_pred EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Q 017967 179 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (363)
Q Consensus 179 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~ 258 (363)
+|+++.|+|..+...++..|++++.+++++ +++++|++.+++.++ +++++++ |+||||.+.+ +++|.++|
T Consensus 80 ~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~---~~~~~v~---~~n~tG~~~~---l~~i~~la 149 (388)
T 1b9h_A 80 EVIVPAFTFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVT---PRTKVIM---PVHMAGLMAD---MDALAKIS 149 (388)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCC---TTEEEEC---CBCGGGCCCC---HHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcC---cCceEEE---EeCCccCcCC---HHHHHHHH
Confidence 999999999999999999999999999853 357899999999886 2455554 8999999975 56677779
Q ss_pred HhcCCeEEEecCCCC-CcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 259 QEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 259 ~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+++|+++|+|++|.. ..+.+. .+ ... .++.+.||||..+++|.|+||+ +++++.
T Consensus 150 ~~~~~~li~D~a~~~g~~~~~~-----~~----~~~-~~i~~~S~s~~K~l~g~~~G~~--~~~~~~ 204 (388)
T 1b9h_A 150 ADTGVPLLQDAAHAHGARWQGK-----RV----GEL-DSIATFSFQNGKLMTAGEGGAV--VFPDGE 204 (388)
T ss_dssp HHHTCCBCEECTTCTTCEETTE-----EG----GGS-SSCEEEECCTTSSSCSSSCEEE--EECTTC
T ss_pred HHcCCEEEEecchhcCCccCCe-----ec----ccc-cceEEEEccCCCcccCCCeEEE--EECCHH
Confidence 999999999999986 333211 11 111 2688999998777778899999 777554
No 130
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.85 E-value=8.1e-21 Score=177.82 Aligned_cols=185 Identities=14% Similarity=0.064 Sum_probs=139.9
Q ss_pred HHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCCeEEEe
Q 017967 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSEYR 205 (363)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~ 205 (363)
+|++++|+++.. ++.++ +.+|+++++++ +..++.+||+|+++.|+|..+...+ +..|++++.++
T Consensus 2 ~l~~~la~~~g~-------~~~i~---~~sG~~a~~~~--~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 69 (331)
T 1pff_A 2 ALEGKIAKLEHA-------EACAA---TASGMGAIAAS--VWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFID 69 (331)
T ss_dssp HHHHHHHHHHTC-------SEEEE---ESSHHHHHHHH--HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred hHHHHHHHHhCC-------CeEEE---eCChHHHHHHH--HHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeC
Confidence 689999999743 23443 45568998888 3344679999999999999987765 45899998887
Q ss_pred cccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh-cCCeEEEecCCCCCcCCCCCCchh
Q 017967 206 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDAS 284 (363)
Q Consensus 206 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~ 284 (363)
. .|++.+++.++ ++++++++++||||||.+++ +++|.++|++ +|+++|+||+|.......
T Consensus 70 ~-------~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~------ 130 (331)
T 1pff_A 70 M-------AVPGNIEKHLK---PNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN------ 130 (331)
T ss_dssp T-------TSTTHHHHTCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC------
T ss_pred C-------CCHHHHHHhhc---CCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC------
Confidence 5 36788888776 35678888999999999996 6778888999 999999999998654321
Q ss_pred HHHHHHhcCCeEEEEEcCcccccccccc-ceEEEEeeCChhHHHHHHHHHHhhhcc-ccCCCchHHHHHHhccc
Q 017967 285 SVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQLKRLARP-MYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 285 ~~~~~~~~~~~vi~~~S~SK~~~l~G~R-vG~i~~v~~~~~~~~~~~~~l~~~~~~-~~~~~s~~~q~~~~~~l 356 (363)
+. + .+..+++.|+||.++.+|.| +||+ ++++++ +++.++..... ...+.+.+.|.++...+
T Consensus 131 ~~----~-~~~d~~~~s~~K~~~~~~~r~~G~~--~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 193 (331)
T 1pff_A 131 PL----D-LGVDIVVHSATKYINGHTDVVAGLV--CSRADI----IAKVKSQGIKDITGAIISPHDAWLITRGT 193 (331)
T ss_dssp GG----G-GTCSEEEEETTTTTSSSSSCCCEEE--EECHHH----HHHHHHTCCCCCCCCCCCHHHHHHHHHHH
T ss_pred hh----h-cCCcEEEEECccccCCCCCceEEEE--EeCcHH----HHHHHHHHHHhhcCCCCCHHHHHHHHcCc
Confidence 11 1 24679999999999999999 7999 776426 56667665544 44567777777654443
No 131
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.85 E-value=8.9e-21 Score=184.04 Aligned_cols=202 Identities=19% Similarity=0.142 Sum_probs=133.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCC---------cchHHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI---------EGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---------~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
+.+.|..+.+ ..+++.+.+++.+.+... ..|+.. ....++|+++++++.. ++++|++
T Consensus 18 ~~~~Ld~~~~------~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~ 83 (432)
T 3a9z_A 18 RKVYMDYNAT------TPLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMIGG------KPQDIIF 83 (432)
T ss_dssp CCEECBTTTC------CCCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHHTC------CGGGEEE
T ss_pred CcEEeeCCcc------CCCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHcCC------CcCeEEE
Confidence 6778877664 245677777777665331 233221 1246899999999732 3578988
Q ss_pred EeccchhHHHHHHHHHHHH------hCCCCEEEEcCCCCcch-----------------HHHHhhCCCCeEEEecccCCC
Q 017967 155 VQGLSGTGSLRLAAALIER------YFPGAKVLISSPTWGNH-----------------KNIFNDARVPWSEYRYYDPKT 211 (363)
Q Consensus 155 ~~t~ggt~al~l~~~l~~~------~~~gd~Vlv~~P~y~~~-----------------~~~~~~~G~~~~~v~~~~~~~ 211 (363)
|.|++++++++...+.. ..+||+|+++.|+|..+ ....+..|++++.+++++ .+
T Consensus 84 --~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~-~~ 160 (432)
T 3a9z_A 84 --TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK-VN 160 (432)
T ss_dssp --ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCT-TT
T ss_pred --eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCc-cc
Confidence 99999999988544321 14899999999999875 344456799999999843 25
Q ss_pred CCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC----------CeEEEecCCCCCcCCCCCC
Q 017967 212 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN----------HIPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 212 ~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~----------~~ii~De~y~~~~~~~~~~ 281 (363)
+.+|++.|++.++ ++++++++++||||||.+++.+ +|.++|++++ +++|+||+|......
T Consensus 161 ~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~---- 230 (432)
T 3a9z_A 161 GQVEVEDILAAVR---PTTCLVTIMLANNETGVIMPIS---EISRRIKALNQIRAASGLPRVLVHTDAAQALGKRR---- 230 (432)
T ss_dssp SSCCHHHHHHTCC---TTEEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSC----
T ss_pred CCcCHHHHHHhcc---CCceEEEEECcccCcccccCHH---HHHHHHHhcCcccccccCCceEEEEEchhhhCCcc----
Confidence 6789999998886 3577888999999999999975 4667789988 999999999764321
Q ss_pred chhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 282 ~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
..+.. .+.+ +++.|+||.+| .|+||+ +++++
T Consensus 231 --~~~~~---~~~d-~~~~s~~K~~g---~~~G~~--~~~~~ 261 (432)
T 3a9z_A 231 --VDVED---LGVD-FLTIVGHKFYG---PRIGAL--YVRGV 261 (432)
T ss_dssp --CCHHH---HCCS-EEEEEGGGTTC---CSCEEE--EETTB
T ss_pred --cChhh---cCCC-EEEEehhHhcC---CcceEE--EEccc
Confidence 11221 2234 55899999764 679999 77643
No 132
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.85 E-value=1.2e-20 Score=183.27 Aligned_cols=252 Identities=15% Similarity=0.101 Sum_probs=150.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.+...-|. ..+.+.+++.+.+... ..|.+..+..+.++++++++....+ ...++|++ |+||+++
T Consensus 30 ~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~gg~ea 101 (430)
T 3i4j_A 30 RYLDGSSGALVANIGH--GRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWA--VSGGSEA 101 (430)
T ss_dssp EEEETTHHHHTCTTCB--CCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEE--ESSHHHH
T ss_pred EEEECCCchhccccCC--CCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCcHHHH
Confidence 6889988754333332 2566777766655332 2233333444555555555544332 23578988 9999999
Q ss_pred HHHHHHHHHHh------CCCCEEEEcCCCCcchHHHHhhCCC---------------CeEEEecccC-CCCCCCHHHHHH
Q 017967 164 LRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARV---------------PWSEYRYYDP-KTVGLDFEGMIA 221 (363)
Q Consensus 164 l~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~---------------~~~~v~~~~~-~~~~~d~~~l~~ 221 (363)
++++..++... ..++.|++.+|+|.++...+...+. .+..++..+. .....|++.|++
T Consensus 102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 181 (430)
T 3i4j_A 102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA 181 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence 99985544333 4578999999999988765543332 2333332100 001236688998
Q ss_pred HHHcCC-CCcEEEEEcCCCC-CCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEE
Q 017967 222 DIKAAP-GGSFILLHGCAHN-PTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (363)
Q Consensus 222 ~l~~~~-~~~~~~~i~~p~N-PTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 298 (363)
.+++.. +++.++++..+|| ++|. .++.+++++|.++|+++|+++|+||+|.+|...+. ......+.+...++
T Consensus 182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~---~~~~~~~~~~~~di-- 256 (430)
T 3i4j_A 182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS---PLALSRWSGVTPDI-- 256 (430)
T ss_dssp HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGGTTTCCCSE--
T ss_pred HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc---hhhhhhhcCCCCcE--
Confidence 887422 3344555444455 7886 67888899999999999999999999999865431 11111110112333
Q ss_pred EEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhh----hccccCCCchHHHHHHhcccc
Q 017967 299 AQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRL----ARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 299 ~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~----~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.+|||.++ .| +|+||+ +++ ++ +++.+... .....++.++++|.++...|+
T Consensus 257 -~t~sK~l~-~G~~r~G~~--~~~-~~----i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 257 -AVLGKGLA-AGYAPLAGL--LAA-PQ----VYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311 (430)
T ss_dssp -EEECGGGT-TTSSCCEEE--EEC-HH----HHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred -EEEccccc-CCccccEEE--EEC-HH----HHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence 36899999 59 999999 664 76 56666642 333455788999988877665
No 133
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.85 E-value=9.1e-21 Score=184.62 Aligned_cols=249 Identities=12% Similarity=0.017 Sum_probs=160.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|++.|.+....+. ..+.+.+++.+.+... ..|....|..++++++++++....+... ++++++ |+||++|
T Consensus 44 ~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~--~~ggsea 116 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGY--GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEG-THKIWF--GHSGSDA 116 (439)
T ss_dssp EEEESSTTTTTCTTCB--SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEE--ESSHHHH
T ss_pred EEEECCCchhhccCCC--CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEE--eCCHHHH
Confidence 6899998886433332 4567777776665442 3354455566677777777665543221 168887 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC-CCCe--------------EEEecccCCCCCC-----CHHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RVPW--------------SEYRYYDPKTVGL-----DFEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~~~--------------~~v~~~~~~~~~~-----d~~~l~~~l 223 (363)
++++..+...+.+++.|++.+|+|.++....... |... ..++.. ..+.. |++.|++++
T Consensus 117 ~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l 194 (439)
T 3dxv_A 117 NEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEKL 194 (439)
T ss_dssp HHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHHH
Confidence 9998554333446789999999997665544333 2211 222221 11111 689999999
Q ss_pred H-cCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 224 K-AAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 224 ~-~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
+ ..+++++++++.+++|++|.+.+. +.+++|.++|++||+++|+||+|.+|...+. ..... ..+...+++ |
T Consensus 195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~---~~~~~-~~~~~~di~---s 267 (439)
T 3dxv_A 195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR---LHCFE-HEGFVPDIL---V 267 (439)
T ss_dssp HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS---SSGGG-GTTCCCSEE---E
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch---hhHHH-hcCCCCCEE---E
Confidence 4 223456777777788888887654 4599999999999999999999998754321 11111 112223433 9
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
|||.++ +|+|+||+ +++ ++ +++.+........+ .++++|.++...|+
T Consensus 268 ~sK~~~-~G~riG~~--~~~-~~----~~~~~~~~~~~~t~-~~~~~~~aa~aal~ 314 (439)
T 3dxv_A 268 LGKGLG-GGLPLSAV--IAP-AE----ILDCASAFAMQTLH-GNPISAAAGLAVLE 314 (439)
T ss_dssp ECGGGG-TTSCCEEE--EEE-HH----HHTSCSSSSCCTTT-TCHHHHHHHHHHHH
T ss_pred Ecchhc-CCcceEEE--EEC-HH----HHhhhcCCCcCCCc-ccHHHHHHHHHHHH
Confidence 999999 69999999 665 65 55555443333444 78888888766655
No 134
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=2.3e-20 Score=181.45 Aligned_cols=239 Identities=15% Similarity=0.110 Sum_probs=157.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-|+ ..+.+.+++.+.+.......| +.....+|++++++++. .+++|++ ++||+++
T Consensus 56 ~ylD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~--~~sGsea 123 (434)
T 3l44_A 56 KYIDYLAAYGPIITGH--AHPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEAMP-------ALDKVRF--VNSGTEA 123 (434)
T ss_dssp EEEECCGGGTTCSSCB--TCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHCT-------TCSEEEE--ESSHHHH
T ss_pred EEEECCCchhccccCC--CCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCchHHH
Confidence 7899988874333333 356777777665543332334 56677889898888852 2578988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC-CC-------------------CeEEEecccCCCCCCCHHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RV-------------------PWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~-------------------~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
++++..+.....++++|++.+|+|.++...+... |. .+..+|. -|++.+++++
T Consensus 124 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l 196 (434)
T 3l44_A 124 VMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETLKEAL 196 (434)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-------TCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHHHHHH
Confidence 9998554433347799999999998765433322 21 1222221 1889999998
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
++.++++.++++..++|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+. ......+ ....+ +.+|
T Consensus 197 ~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~---~~~~~~~-~~~~d---i~t~ 268 (434)
T 3l44_A 197 DKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY---GGAQDLL-GVTPD---LTAL 268 (434)
T ss_dssp HHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS---SCHHHHH-TCCCS---EEEE
T ss_pred HhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc---cHHHHHc-CCCCC---eeeh
Confidence 75333445555444444555555 8899999999999999999999999998 3321 1222222 22233 4579
Q ss_pred ccccccccccceEEEEeeCChhHHHHHHHHHHhh---hccccCCCchHHHHHHhcccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL---ARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~---~~~~~~~~s~~~q~~~~~~l~ 357 (363)
||.++ +|+|+||+ +++ ++ +++.+... .....++.++++|.++...|+
T Consensus 269 sK~~~-~G~~iG~~--~~~-~~----i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~ 318 (434)
T 3l44_A 269 GKVIG-GGLPIGAY--GGK-KE----IMEQVAPLGPAYQAGTMAGNPASMASGIACLE 318 (434)
T ss_dssp EGGGG-TTSSCEEE--EEC-HH----HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred hhhhc-CCcCeeeE--EEc-HH----HHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 99998 89999999 665 66 55555431 123345778888888766655
No 135
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.84 E-value=2.6e-20 Score=180.54 Aligned_cols=246 Identities=11% Similarity=-0.015 Sum_probs=153.5
Q ss_pred CcEEeeccccCCCCCCccc-cHHHHHHHHHHHccCCC---CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 84 KKLNLGVGAYRTEELQPYV-LDVVKKAENLMLERGEN---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~-~~~v~~a~~~~~~~~~~---~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
.++|+..|.+...-+ +. ++.+.+++.+.+..... ..| +.....++++.+++++ +..+ +++|++ |+|
T Consensus 43 ~~lD~~~~~~~~~lG--~~~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~~~~-~~~v~~--~~g 112 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLG--WPSHPEVIKIGIEQMQKLAHAAANDF-YNIPQLELAKKLVTYS----PGNF-QKKVFF--SNS 112 (419)
T ss_dssp EEEESSGGGGTTTTC--BSCCHHHHHHHHHHHTTSCCCSCSCS-CCHHHHHHHHHHHHHS----SCSS-CEEEEE--ESS
T ss_pred EEEEccCChhhhccC--CCCCHHHHHHHHHHHhhCcccccccc-CCHHHHHHHHHHHHhC----CCCc-CCEEEE--eCc
Confidence 688998887421112 22 56777777766643211 113 3333456666666653 3222 578988 999
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hC-------------CCCeEEEecccCCC--CC----------
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA-------------RVPWSEYRYYDPKT--VG---------- 213 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~-------------G~~~~~v~~~~~~~--~~---------- 213 (363)
|+++++++..++..+ +||+|++.+|+|.++..... .. +..++.+|..+... ++
T Consensus 113 g~ea~~~ai~~~~~~-~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~ 191 (419)
T 2eo5_A 113 GTEAIEASIKVVKNT-GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSEL 191 (419)
T ss_dssp HHHHHHHHHHHHHTT-SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHH
T ss_pred hHHHHHHHHHHHHHh-hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhh
Confidence 999999985433222 48999999999976543222 11 23567777632111 12
Q ss_pred --CCHHHHH-HHHHcCC--CCcEEEEEcCCC-CCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHH
Q 017967 214 --LDFEGMI-ADIKAAP--GGSFILLHGCAH-NPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (363)
Q Consensus 214 --~d~~~l~-~~l~~~~--~~~~~~~i~~p~-NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (363)
+|++.|+ +.+++.. ++++++ +++|+ ||||. .++.+++++|.++|+++|+++|+||+|.+|...+. ....
T Consensus 192 ~~~~~~~l~~~~i~~~~~~~~~~~v-i~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~---~~~~ 267 (419)
T 2eo5_A 192 VNRVIEFIEDYIFVNLVPPEEVAGI-FFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK---LFAI 267 (419)
T ss_dssp HHHHHHHHHHTHHHHTCCGGGEEEE-EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGG
T ss_pred HHHHHHHHHHHHHhhccCCCCEEEE-EEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc---hhhH
Confidence 4688999 8887421 234444 46665 57896 67899999999999999999999999999865431 1111
Q ss_pred HHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 287 ~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
. .....++++ ||||.|+ .| +|+||+ +++ ++. + .+ ........+.+.++|.++...|+.
T Consensus 268 ~-~~~~~~d~~---t~sK~~~-~G~~riG~~--~~~-~~~----~-~~-~~~~~~t~~~n~~~~~aa~aal~~ 326 (419)
T 2eo5_A 268 E-NFNTVPDVI---TLAKALG-GGIMPIGAT--IFR-KDL----D-FK-PGMHSNTFGGNALACAIGSKVIDI 326 (419)
T ss_dssp G-GGTCCCSEE---EECGGGG-TTTSCCEEE--EEE-GGG----C-CC-------CCCCCHHHHHHHHHHHHH
T ss_pred H-hcCCCCCEE---Eeccccc-CCccceEEE--EEc-hHh----h-cC-CcccCCCCCCCHHHHHHHHHHHHH
Confidence 1 112234433 8999999 59 999999 776 443 3 23 111223457788999888776654
No 136
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.84 E-value=3.5e-20 Score=179.73 Aligned_cols=237 Identities=15% Similarity=0.112 Sum_probs=156.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|++.|...+.-++ ..+.+.+++.+.++.... ..| +.....++++.+++++ + .+++++ |+||+
T Consensus 58 ~~lD~~~~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~ggt 124 (420)
T 2pb2_A 58 EYIDFAGGIAVTALGH--CHPALVEALKSQGETLWHTSNVF-TNEPALRLGRKLIDAT----F----AERVLF--MNSGT 124 (420)
T ss_dssp EEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCCCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEE--ESSHH
T ss_pred EEEEccccccccccCC--CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCeEEE--eCCHH
Confidence 6889988843222232 356777777766643211 112 3334456666666653 2 378888 99999
Q ss_pred HHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCCCC------------eEEEecccCCCCCCCHHHHHHH
Q 017967 162 GSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 162 ~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
+|++++..++.... +| +.|++.+|+|.++.. .+...|.+ +..++. .|++.|++.
T Consensus 125 eA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~ 197 (420)
T 2pb2_A 125 EANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAV 197 (420)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHH
Confidence 99999855432211 67 599999999977643 34444543 444443 379999998
Q ss_pred HHcCCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 223 IKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
++ ++++++++++++||+|. +++.+++++|.++|+++|+++|+||+|.+|...+. ...... .+...+++ |
T Consensus 198 i~---~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~---~~~~~~-~~~~~dii---t 267 (420)
T 2pb2_A 198 MD---DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD---LFAYMH-YGVTPDIL---T 267 (420)
T ss_dssp CC---TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSHHHH-HTCCCSEE---E
T ss_pred hc---cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc---HHHHHh-cCCCCCeE---E
Confidence 86 35677777888888884 69999999999999999999999999988865431 122222 23334554 7
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|||.++ +|+|+||+ +++ ++ +++.+........++.+.++|.++...|+.
T Consensus 268 ~sK~l~-~G~~iG~~--~~~-~~----l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~ 316 (420)
T 2pb2_A 268 SAKALG-GGFPVSAM--LTT-QE----IASAFHVGSHGSTYGGNPLACAVAGAAFDI 316 (420)
T ss_dssp ECGGGG-TTSCCEEE--EEC-HH----HHTTCC----CCEECCCHHHHHHHHHHHHH
T ss_pred eccccc-CCCceEEE--EEh-HH----HHHhhcCCCcCcccCcCHHHHHHHHHHHHH
Confidence 899999 89999999 776 55 344333322233457788888887665543
No 137
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.84 E-value=5.7e-20 Score=178.47 Aligned_cols=247 Identities=10% Similarity=-0.011 Sum_probs=158.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC---CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
.++|+..+.+...-++ ..+.+.+++.+.+..... ..| +.....++++++++++. ..+++|++ |+||
T Consensus 44 ~ylD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~------~~~~~v~~--~~gg 112 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGY--NHPQLNAAMKSQIDAMSHVMFGGI-THAPAIELCRKLVAMTP------QPLECVFL--ADSG 112 (429)
T ss_dssp EEEESSTTTTTCTTCB--SCHHHHHHHHHHHHHCSCCCCSSE-ECHHHHHHHHHHHHHSC------TTCCEEEE--ESSH
T ss_pred EEEEcCccHhhccCCC--CCHHHHHHHHHHHHhccccccccc-CCHHHHHHHHHHHHhCC------CCCCEEEE--eCCH
Confidence 5788887764222222 356777777666543211 133 23334677778887742 23689988 9999
Q ss_pred hHHHHHHHHHHHH-hC----CCCEEEEcCCCCcchHHHHh-hCC-------------CCeEEEeccc---CCCC-CCCHH
Q 017967 161 TGSLRLAAALIER-YF----PGAKVLISSPTWGNHKNIFN-DAR-------------VPWSEYRYYD---PKTV-GLDFE 217 (363)
Q Consensus 161 t~al~l~~~l~~~-~~----~gd~Vlv~~P~y~~~~~~~~-~~G-------------~~~~~v~~~~---~~~~-~~d~~ 217 (363)
++|++++..++.. .. |||+|++.+|+|.++..... ..| ..+..++... ...+ .+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 9999998554322 12 68999999999987654332 211 1344455421 1123 48999
Q ss_pred HHHHHHHcCCCCcEEEEEcCC--CCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCC
Q 017967 218 GMIADIKAAPGGSFILLHGCA--HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (363)
Q Consensus 218 ~l~~~l~~~~~~~~~~~i~~p--~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (363)
.|++.+++.++++++++ ++| |||||. ..+.+++++|.++|+++|+++|+||+|.+|...+. ..... ......
T Consensus 193 ~l~~~l~~~~~~~~~vi-~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~---~~~~~-~~~~~~ 267 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVI-IEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK---LFACE-HAEIAP 267 (429)
T ss_dssp HHHHHHHHHTTTEEEEE-ECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGG-GGTCCC
T ss_pred HHHHHHHhCCCCEEEEE-EeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch---HHHhh-hcCCCC
Confidence 99999874323344554 566 699996 55788899999999999999999999998865321 11111 112233
Q ss_pred eEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhh-----ccccCCCchHHHHHHhcccc
Q 017967 295 ELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLA-----RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 295 ~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~s~~~q~~~~~~l~ 357 (363)
+++ ||||.++ +| +|+||+ +++ ++ +++.+.... .....+.+.++|.++...|+
T Consensus 268 d~~---t~sK~l~-~G~~~iG~~--~~~-~~----~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~ 325 (429)
T 1s0a_A 268 DIL---CLGKALT-GGTMTLSAT--LTT-RE----VAETISNGEAGCFMHGPTFMGNPLACAAANASLA 325 (429)
T ss_dssp SEE---EECGGGG-TSSSCCEEE--EEC-HH----HHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred CEE---Eeccccc-CCCccceEE--EeC-HH----HHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHH
Confidence 433 7999998 68 999999 665 56 455555421 22344678888888766654
No 138
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.84 E-value=1.3e-20 Score=179.91 Aligned_cols=198 Identities=10% Similarity=0.040 Sum_probs=139.5
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g 177 (363)
..+++.+.+++.+.. . ..|.+ .....++++++++++... .+++|++ |.||+++++++ +...+.+|
T Consensus 32 ~~~~~~v~~a~~~~~---~-~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~--~~gg~~al~~~--~~~~~~~g 98 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRM---I-GHMQKEMLQIMEEIKQGIQYVFQTR-----NPLTLVV--SGSGHCAMETA--LFNLLEPG 98 (393)
T ss_dssp CCCCHHHHHHTTCCC---C-CTTSHHHHHHHHHHHHHHHHHHTCC-----CSEEEEE--SCCTTTHHHHH--HHHHCCTT
T ss_pred CCCCHHHHHHhcccc---c-CcccHHHHHHHHHHHHHHHHHhCCC-----CCcEEEE--eCCcHHHHHHH--HHhcCCCC
Confidence 445677777654311 1 12222 234567888888886432 1345777 99999999888 44457799
Q ss_pred CEEEEcCCCCcc--hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 178 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 178 d~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
|+|+++.++|.. +...++..|++++.++++ .++.+|++.+++.+++ .+++++++++||||||.+++ +++|.
T Consensus 99 d~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~ 171 (393)
T 3kgw_A 99 DSFLTGTNGIWGMRAAEIADRIGARVHQMIKK--PGEHYTLQEVEEGLAQ--HKPVLLFLVHGESSTGVVQP---LDGFG 171 (393)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTTHH
T ss_pred CEEEEEeCCchhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHhh--CCCcEEEEeccCCcchhhcc---HHHHH
Confidence 999999988853 367778899999999984 3457999999999984 14567788999999999998 66788
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHh
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 335 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~ 335 (363)
++|+++|+++|+||+|...... . + .+.....+++.|+||.++ .+.++||+ +++ ++ +++.+..
T Consensus 172 ~l~~~~~~~li~De~~~~g~~~-~--~-------~~~~~~d~~~~s~sK~~~-~~~g~g~~--~~~-~~----~~~~~~~ 233 (393)
T 3kgw_A 172 ELCHRYQCLLLVDSVASLGGVP-I--Y-------MDQQGIDIMYSSSQKVLN-APPGISLI--SFN-DK----AKYKVYS 233 (393)
T ss_dssp HHHHHTTCEEEEECTTTTTTSC-C--C-------TTTTTCCEEEEESSSTTC-CCSSCEEE--EEC-HH----HHHHHHT
T ss_pred HHHHHcCCEEEEECCccccCcc-c--c-------hhhcCCCEEEecCccccc-CCCceeEE--EEC-HH----HHHHHhc
Confidence 8899999999999997632211 0 0 112235678899999774 34458999 665 66 4555543
No 139
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.84 E-value=2e-20 Score=180.16 Aligned_cols=192 Identities=13% Similarity=0.011 Sum_probs=137.1
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEE-EEeccchhHHHHHHHHHHHHhCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVA-TVQGLSGTGSLRLAAALIERYFP 176 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~-~~~t~ggt~al~l~~~l~~~~~~ 176 (363)
..+++.+.+++.+ .....|.+ .....++++++++++.. ++++++ + +.||++++.++ +..++.+
T Consensus 20 ~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~~~~~--~~s~t~al~~~--~~~l~~~ 85 (416)
T 3isl_A 20 VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELFQT------KNRWAYPI--DGTSRAGIEAV--LASVIEP 85 (416)
T ss_dssp CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHTTC------CCSEEEEE--ESCHHHHHHHH--HHHHCCT
T ss_pred cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHhCC------CCCcEEEe--cCcHHHHHHHH--HHHhcCC
Confidence 4456677665433 11122322 23456778888887532 234443 5 88999999888 4455789
Q ss_pred CCEEEEcCCCCcc--hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 177 GAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 177 gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
||+|++++|+|.. +...++..|++++.++++ .++.+|++.+++++++ ++++++++++||||||..++ +++|
T Consensus 86 gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i 158 (416)
T 3isl_A 86 EDDVLIPIYGRFGYLLTEIAERYGANVHMLECE--WGTVFDPEDIIREIKK--VKPKIVAMVHGETSTGRIHP---LKAI 158 (416)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CHHH
T ss_pred CCEEEEecCCcccHHHHHHHHhcCCeeEEEecC--CCCCCCHHHHHHHHhh--CCCcEEEEEccCCCCceecC---HHHH
Confidence 9999999999987 777888999999999984 3567899999999973 13568888999999999998 6678
Q ss_pred HHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHH
Q 017967 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA 326 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~ 326 (363)
.++|+++|+++|+|++|...... . + .......+++.|++|.++ .+.++|++ +++ ++.+
T Consensus 159 ~~l~~~~~~~li~D~a~~~~~~~-~--~-------~~~~~~d~~~~s~~K~l~-g~~g~g~~--~~~-~~~~ 216 (416)
T 3isl_A 159 GEACRTEDALFIVDAVATIGGCE-V--K-------VDEWKIDAAIGGTQKCLS-VPSGMAPI--TYN-ERVA 216 (416)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSC-C--C-------TTTTTCSEEECCSSSTTC-CCSSEEEE--EEC-HHHH
T ss_pred HHHHHHcCCEEEEECCccccCCC-c--c-------hhhcCCCEEEecCccccC-CCCCeEEE--EEC-HHHH
Confidence 88899999999999997633221 0 0 112235688999999753 34568999 665 6633
No 140
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.84 E-value=3.3e-20 Score=176.40 Aligned_cols=195 Identities=14% Similarity=0.054 Sum_probs=146.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
..++|+.|.+ .+.+ +.+++.+.... ..|.+..+..++++++++++.. +++++ +.||++|
T Consensus 7 ~~~~l~~~~~-------~~~~-~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~a 65 (374)
T 3uwc_A 7 PYSYLERQFA-------DIEP-YLNDLREFIKT---ADFTLGAELEKFEKRFAALHNA--------PHAIG--VGTGTDA 65 (374)
T ss_dssp CSCCHHHHTS-------SCHH-HHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHTTC--------SEEEE--ESCHHHH
T ss_pred eeeccccCCC-------CchH-HHHHHHHHHHc---CCcccChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHH
Confidence 4677877764 2233 66776666544 3477888999999999999632 36666 8999999
Q ss_pred HHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 164 LRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 164 l~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
++++ +..+ +.+||+|+++.|+|..+...++..|++++.++.+ +++.+|++.+++.+++ ++++++ |+|||
T Consensus 66 ~~~~--~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~---~~~~v~---~~n~~ 135 (374)
T 3uwc_A 66 LAMS--FKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITD---KTKAIM---PVHYT 135 (374)
T ss_dssp HHHH--HHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCT---TEEEEC---CBCGG
T ss_pred HHHH--HHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCC---CceEEE---EeCCc
Confidence 8887 4444 5799999999999999999999999999999985 5688999999988763 455554 89999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc--cccccccccceEEEEee
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVC 320 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S--K~~~l~G~RvG~i~~v~ 320 (363)
|...+ +++|.++|+++|+++|+|++|..+..-+. ... .. ...+++.||| |.++.+|. .|++ ++
T Consensus 136 G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~--~~~------~~-~~d~~~~s~~~~K~l~~~g~-~g~~--~~ 200 (374)
T 3uwc_A 136 GNIAD---MPALAKIAKKHNLHIVEDACQTILGRIND--KFV------GS-WGQFACFSLHPLKNLNVWSD-AGVI--IT 200 (374)
T ss_dssp GCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT--EET------TS-SSSEEEEECSSSSSSCCSSC-CEEE--EE
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCC--eec------cc-cccEEEEeCCCCCcCCccce-eEEE--Ee
Confidence 99876 56677789999999999999986532111 000 00 1246677766 99985576 8888 77
Q ss_pred CChh
Q 017967 321 SSSD 324 (363)
Q Consensus 321 ~~~~ 324 (363)
++++
T Consensus 201 ~~~~ 204 (374)
T 3uwc_A 201 HSDE 204 (374)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 7776
No 141
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.84 E-value=2.5e-20 Score=181.09 Aligned_cols=247 Identities=11% Similarity=0.054 Sum_probs=153.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCC--CCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.+...-++ ..+.+.+++.+.+.... ...| +.....++++.+++++ + .++++|++ |+||+
T Consensus 44 ~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~--~~gg~ 112 (433)
T 1zod_A 44 AILDFTSGQMSAVLGH--CHPEIVSVIGEYAGKLDHLFSEM-LSRPVVDLATRLANIT----P--PGLDRALL--LSTGA 112 (433)
T ss_dssp EEEETTHHHHTCTTCB--TCHHHHHHHHHHHHHCCCCCTTC-CCHHHHHHHHHHHHHS----C--TTCCEEEE--ESCHH
T ss_pred EEEEcccchhccccCC--CCHHHHHHHHHHHHhCccccccc-CCHHHHHHHHHHHHhC----C--CCcCEEEE--eCchH
Confidence 5788877764222222 35667777666553321 1233 2334456666666663 2 13578988 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC------------CCCeEEEecccC--CCC--------CCCHHHH
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA------------RVPWSEYRYYDP--KTV--------GLDFEGM 219 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~------------G~~~~~v~~~~~--~~~--------~~d~~~l 219 (363)
+|++++..+......+|+|++.+|+|.++....... ...+..++.... ..+ .+|++.|
T Consensus 113 ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l 192 (433)
T 1zod_A 113 ESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYA 192 (433)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHH
Confidence 999998553322234589999999998765432211 113334433110 112 2368999
Q ss_pred HHHHHcCC-CCcEEEEEcCC-CCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeE
Q 017967 220 IADIKAAP-GGSFILLHGCA-HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (363)
Q Consensus 220 ~~~l~~~~-~~~~~~~i~~p-~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~v 296 (363)
++.+++.. +++++++ ++| +||||. .++.+++++|.++|++||+++|+||+|.+|...+. ...... .....++
T Consensus 193 e~~l~~~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~---~~~~~~-~~~~~di 267 (433)
T 1zod_A 193 FDLIDRQSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT---MFACQR-DGVTPDI 267 (433)
T ss_dssp HHHHHHHCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSTHHH-HTCCCSE
T ss_pred HHHHHhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch---HhHHhh-cCCCCCE
Confidence 99887421 2344444 566 588996 57899999999999999999999999999865321 112221 2222333
Q ss_pred EEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhh--ccccCCCchHHHHHHhcccc
Q 017967 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA--RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 297 i~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~--~~~~~~~s~~~q~~~~~~l~ 357 (363)
.||||.|+. |+|+||+ +++ ++ +++.+.... .....+.++++|.++...|+
T Consensus 268 ---~s~sK~~~~-G~~ig~~--~~~-~~----~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~ 319 (433)
T 1zod_A 268 ---LTLSKTLGA-GLPLAAI--VTS-AA----IEERAHELGYLFYTTHVSDPLPAAVGLRVLD 319 (433)
T ss_dssp ---EEECHHHHT-TSSCEEE--EEC-HH----HHHHHHHTTCCCCCTTTTCHHHHHHHHHHHH
T ss_pred ---EEecccccC-CCCeeEE--EEh-HH----HHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 489999994 9999999 776 56 455554422 11445678888887766654
No 142
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.84 E-value=1.6e-21 Score=187.03 Aligned_cols=186 Identities=12% Similarity=0.015 Sum_probs=133.5
Q ss_pred ccccHHHHHHHHHHHccC---CCCCCCC----CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHH
Q 017967 100 PYVLDVVKKAENLMLERG---ENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 172 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~---~~~~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~ 172 (363)
..+++.+.+++.+.+... ....|.. .....++++++++++.. ++++|++ |+||+++++++.. .
T Consensus 30 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~------~~~~v~~--~~g~t~al~~~~~--~ 99 (400)
T 3vax_A 30 TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSA------EPDELIF--TSGATESNNIALL--G 99 (400)
T ss_dssp SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTC------CGGGEEE--ESCHHHHHHHHHH--T
T ss_pred CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCC------CCCcEEE--eCCHHHHHHHHHH--H
Confidence 345677777766655310 0001211 22356777788877532 3678988 9999999999843 3
Q ss_pred Hh----CCCC-EEEEcCCCCcchHHHHh---hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCC
Q 017967 173 RY----FPGA-KVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI 244 (363)
Q Consensus 173 ~~----~~gd-~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~ 244 (363)
+. .+|| .|+++.+.|+.+...+. ..|++++.++++ .++.+|++.|+++++ ++++++++++||||||.
T Consensus 100 l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~ 174 (400)
T 3vax_A 100 LAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPG--PSGRISVEGVMERLR---PDTLLVSLMHVNNETGV 174 (400)
T ss_dssp THHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCC--TTCCCCHHHHHTTCC---TTEEEEECCSBCTTTCB
T ss_pred HHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccC--CCCCcCHHHHHHhcC---CCceEEEEECCCCCcee
Confidence 33 6899 99999999988766554 479999999984 367889999999886 35788999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 245 ~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
+++. ++|.++|+++|+++|+|++|...... .. .... ..+++.|+||.+|.+| +|++
T Consensus 175 ~~~l---~~i~~la~~~~~~li~D~a~~~~~~~------~~----~~~~-~d~~~~s~~K~~g~~g--~g~~ 230 (400)
T 3vax_A 175 IQPV---AELAQQLRATPTYLHVDAAQGYGKVP------GD----LTTP-IDMISISGHKIGAPKG--VGAL 230 (400)
T ss_dssp BCCH---HHHHHHHTTSSCEEEEECTTTTTTSG------GG----GGSC-CSEEEEETGGGTSCSS--CEEE
T ss_pred eCcH---HHHHHHHHhcCCEEEEEhhhhcCCCC------cC----hhhc-CcEEEEeHHHhCCCCc--eEEE
Confidence 9984 66778899999999999998743211 11 1222 4588999999877555 5777
No 143
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.84 E-value=3.4e-20 Score=174.76 Aligned_cols=214 Identities=14% Similarity=0.014 Sum_probs=150.1
Q ss_pred CCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
+++.|+|+.+.+ ..+.+.+.+++.+.... ....|++.....++++.+++++. . +.+|++ |.||+
T Consensus 6 ~~~~id~~~~~~------~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g-~------~~~v~~--~~~gt 69 (356)
T 1v72_A 6 RPPALGFSSDNI------AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIFE-R------DVEVFL--VPTGT 69 (356)
T ss_dssp CCCCCBCSCGGG------CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHHT-S------CCEEEE--ESCHH
T ss_pred CCceEeeccCCc------cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHhC-C------CCcEEE--eCCcc
Confidence 357889987653 23467788887665422 22567666677888888888863 1 356777 99999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH--HhhC--CCCeEEEecccCCCCCCCHHHHHH-HHHcC----CCCcEE
Q 017967 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI--FNDA--RVPWSEYRYYDPKTVGLDFEGMIA-DIKAA----PGGSFI 232 (363)
Q Consensus 162 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--~~~~--G~~~~~v~~~~~~~~~~d~~~l~~-~l~~~----~~~~~~ 232 (363)
+++.++ +...+.+||.|+++.|+|..+... +... |++++.+|.+ ++.+|++.+++ .+++. ..++++
T Consensus 70 ~a~~~a--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~ 144 (356)
T 1v72_A 70 AANALC--LSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPAC 144 (356)
T ss_dssp HHHHHH--HHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEE
T ss_pred HHHHHH--HHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceE
Confidence 998887 444456999999999998776554 6666 9999999873 36899999999 88641 114678
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcC--CCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 233 ~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
+++++||| ||.+++.+++++|+++|+++|+++|+|++|..+.. .+....... .+...+++ +.|+||. |
T Consensus 145 v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~~~d~~-~~s~sK~----g 214 (356)
T 1v72_A 145 VSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT----WKAGVDAL-SFGATKN----G 214 (356)
T ss_dssp EEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT----GGGTCCEE-EECCGGG----T
T ss_pred EEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh----hhhcCCEE-EEecccC----C
Confidence 88888987 99999999999999999999999999999875421 111000000 01123444 5599997 3
Q ss_pred ccce--EEEEeeCChhHHHHH
Q 017967 311 ERIG--AMNVVCSSSDLAARV 329 (363)
Q Consensus 311 ~RvG--~i~~v~~~~~~~~~~ 329 (363)
.|+| |+ ++ +++.++++
T Consensus 215 ~~~G~g~~--~~-~~~~~~~~ 232 (356)
T 1v72_A 215 VLAAEAIV--LF-NTSLATEM 232 (356)
T ss_dssp CSSCEEEE--ES-SGGGHHHH
T ss_pred CcCccEEE--EE-CHHHHhhH
Confidence 4677 66 55 57744444
No 144
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.84 E-value=1.5e-20 Score=180.74 Aligned_cols=197 Identities=13% Similarity=0.073 Sum_probs=140.5
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCc-EEEEeccchhHHHHHHHHHHHHhCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLSGTGSLRLAAALIERYFP 176 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~-i~~~~t~ggt~al~l~~~l~~~~~~ 176 (363)
..+++.+.+++.+.. . ..|.+ .....++++.+++++... .++ +++ +.||+++++++ +..++.+
T Consensus 22 ~~~~~~v~~a~~~~~---~-~~~~~~~~~~~~~~~~~la~~~~~~------~~~~v~~--~~sgt~al~~~--~~~~~~~ 87 (411)
T 3nnk_A 22 INADPRVLRAMSSQL---I-GQYDPAMTHYMNEVMALYRGVFRTE------NRWTMLV--DGTSRAGIEAI--LVSAIRP 87 (411)
T ss_dssp CCCCHHHHHHHTSCC---C-CTTCHHHHHHHHHHHHHHHHHHTCC------CSEEEEE--ESCHHHHHHHH--HHHHCCT
T ss_pred CCCCHHHHHHhhccc---c-ccccHHHHHHHHHHHHHHHHHhCCC------CCcEEEE--CCCcHHHHHHH--HHHhcCC
Confidence 445677777654321 1 22322 123467888888886432 233 555 88999999988 4445789
Q ss_pred CCEEEEcCCCCcc--hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 177 GAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 177 gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
||+|+++.|+|.. +...++..|++++.+++ +.++.+|++.+++++++. +++++++++||||||.+++ +++|
T Consensus 88 gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~---l~~i 160 (411)
T 3nnk_A 88 GDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV--PWGEVFTPDQVEDAVKRI--RPRLLLTVQGDTSTTMLQP---LAEL 160 (411)
T ss_dssp TCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CTTH
T ss_pred CCEEEEecCCchHHHHHHHHHHcCCeEEEEec--CCCCCCCHHHHHHHHhhC--CCeEEEEeCCCCCcceecc---HHHH
Confidence 9999999999977 88889999999999998 346778999999999741 4567788999999999988 5677
Q ss_pred HHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHH
Q 017967 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 334 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~ 334 (363)
.++|+++|+++|+||++...... . . .......+++.|++|.++ .+.++||+ +++ ++ +++.+.
T Consensus 161 ~~l~~~~~~~li~Dea~~~~~~~-~-----~----~~~~~~d~~~~s~~K~l~-~~~g~g~~--~~~-~~----~~~~~~ 222 (411)
T 3nnk_A 161 GEICRRYDALFYTDATASLGGNP-L-----E----TDVWGLDAVSAGMQKCLG-GPSGTSPI--TLS-AR----MEEAIR 222 (411)
T ss_dssp HHHHHHHTCEEEEECTTTBTTBC-C-----C----TTTTTCSEEECCSTTTTC-CCSSEEEE--EEC-HH----HHHHHH
T ss_pred HHHHHHcCCEEEEECCcccCCcc-c-----c----hhccCCcEEEecCccccC-CCCceEEE--EEC-HH----HHHHHh
Confidence 88899999999999996542211 0 0 112235688999999754 34568999 665 66 444444
Q ss_pred h
Q 017967 335 R 335 (363)
Q Consensus 335 ~ 335 (363)
.
T Consensus 223 ~ 223 (411)
T 3nnk_A 223 R 223 (411)
T ss_dssp T
T ss_pred h
Confidence 3
No 145
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.84 E-value=7.9e-20 Score=173.43 Aligned_cols=188 Identities=15% Similarity=0.037 Sum_probs=135.0
Q ss_pred CCccccHHHHHHHHHHHccCCC---CCCCC----CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHH
Q 017967 98 LQPYVLDVVKKAENLMLERGEN---KEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAAL 170 (363)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~---~~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l 170 (363)
+...+++.+.+++.+.+..... ..|.. .....++++++++++.. ++++|++ |+|+++++.++..
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~------~~~~i~~--~~g~~~a~~~~~~- 78 (382)
T 4hvk_A 8 SAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG------GGGTVVF--TSGATEANNLAII- 78 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTC------TTEEEEE--ESSHHHHHHHHHH-
T ss_pred CcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCC------CcCeEEE--ECCchHHHHHHHH-
Confidence 3445677888887776633110 01211 12234677777777532 3578877 9999999998843
Q ss_pred HHHh----CCCCEEEEcCCCCcchHHHHh---hCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017967 171 IERY----FPGAKVLISSPTWGNHKNIFN---DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (363)
Q Consensus 171 ~~~~----~~gd~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG 243 (363)
.+. .+||.|+++.|+|+.+...+. ..|++++.++++ .++.+|++.++++++ ++++++++++||||||
T Consensus 79 -~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG 152 (382)
T 4hvk_A 79 -GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLR---DDTILVSVQHANNEIG 152 (382)
T ss_dssp -HHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCC---TTEEEEECCSBCTTTC
T ss_pred -HhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhc---cCceEEEEECCCCCce
Confidence 334 799999999999998877554 479999999984 457899999999886 3577999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 244 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
.+++. ++|.++|+++|+ +|+|++|...... . ... .....+++.|+||.+|.+| +|++
T Consensus 153 ~~~~~---~~i~~l~~~~~~-li~D~a~~~~~~~---~---~~~----~~~~d~~~~s~~K~~g~~g--~g~~ 209 (382)
T 4hvk_A 153 TIQPV---EEISEVLAGKAA-LHIDATASVGQIE---V---DVE----KIGADMLTISSNDIYGPKG--VGAL 209 (382)
T ss_dssp BBCCH---HHHHHHHSSSSE-EEEECTTTBTTBC---C---CHH----HHTCSEEEEESGGGTSCTT--CEEE
T ss_pred eeCCH---HHHHHHHHHcCE-EEEEhHHhcCCCC---C---Cch----hcCCCEEEEeHHHhcCCCc--eEEE
Confidence 99984 567778999999 9999997532211 1 111 1134588999999887666 6777
No 146
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.83 E-value=1.3e-19 Score=173.41 Aligned_cols=189 Identities=14% Similarity=0.023 Sum_probs=141.6
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEEE
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVL 181 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~Vl 181 (363)
++.+.+++.+.+... .|.+..+..++++++++++.. +++++ +.||++|++++ +..+ +.+||+|+
T Consensus 19 ~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~al~~~--~~~~~~~~gd~Vl 83 (393)
T 1mdo_A 19 GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTGN--------QYAVA--VSSATAGMHIA--LMALGIGEGDEVI 83 (393)
T ss_dssp CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHH--HHHTTCCTTCEEE
T ss_pred CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhCC--------CcEEE--ecChHHHHHHH--HHHcCCCCCCEEE
Confidence 456667776666442 244667899999999999733 36766 89999999988 3444 57999999
Q ss_pred EcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 182 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
++.|+|..+...++..|++++.++++ ++++.+|++.+++.+++ ++++++++ ||||...+ +++|.++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~---~~~~v~~~---~~~G~~~~---~~~i~~l~~~~ 153 (393)
T 1mdo_A 84 TPSMTWVSTLNMIVLLGANPVMVDVD-RDTLMVTPEHIEAAITP---QTKAIIPV---HYAGAPAD---LDAIYALGERY 153 (393)
T ss_dssp EESSSCHHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCCT---TEEEECCB---CGGGCCCC---HHHHHHHHHHH
T ss_pred eCCCccHhHHHHHHHCCCEEEEEecc-CCcCCCCHHHHHHhcCC---CceEEEEe---CCCCCcCC---HHHHHHHHHHc
Confidence 99999999999999999999999985 33577999999998863 45566643 58999865 67778889999
Q ss_pred CCeEEEecCCCCC-cCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHH
Q 017967 262 NHIPFFDVAYQGF-ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 262 ~~~ii~De~y~~~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
|+++|+|++|... .+.. . .. .. ..+++.||||..+++|.|+||+ ++++++.++++
T Consensus 154 ~~~li~D~a~~~g~~~~~--~-~~------~~--~d~~~~S~~k~K~l~~~~~g~~--~~~~~~~~~~l 209 (393)
T 1mdo_A 154 GIPVIEDAAHATGTSYKG--R-HI------GA--RGTAIFSFHAIKNITCAEGGIV--VTDNPQFADKL 209 (393)
T ss_dssp TCCBCEECTTCTTCEETT--E-ET------TS--SSEEEEECCTTSSSCSSSCEEE--EESCHHHHHHH
T ss_pred CCeEEEECccccCCeECC--e-ec------CC--CCeEEEeCCCCCccccccceEE--EeCCHHHHHHH
Confidence 9999999999863 3321 1 10 11 6788999994444456699999 77767743333
No 147
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.83 E-value=2.2e-20 Score=175.47 Aligned_cols=192 Identities=14% Similarity=-0.006 Sum_probs=136.1
Q ss_pred ccccHHHHHHHHHHHccCCCCCCC-CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 178 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd 178 (363)
..+++.+.+++.+.... +.|. ...+..++|+++++++.. ..+++++++ |.||++++.++. . .+.. |
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~--t~g~t~a~~~~~--~-~~~~-d 75 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFDP----GEGALVAAL--AGSGSLGMEAGL--A-NLDR-G 75 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHCC----CTTCEEEEE--SSCHHHHHHHHH--H-TCSC-C
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhCC----CCCCceEEE--cCCcHHHHHHHH--H-HhcC-C
Confidence 34566777765443322 2232 134678999999999733 223578877 999999998883 2 2334 8
Q ss_pred EEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHH
Q 017967 179 KVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (363)
Q Consensus 179 ~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~ 256 (363)
+|++++|+|..+ ...++..|++++.++++ .++.+|++.+++.+++. +++++++++|+||||.+++ +++|.+
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i~~ 148 (353)
T 2yrr_A 76 PVLVLVNGAFSQRVAEMAALHGLDPEVLDFP--PGEPVDPEAVARALKRR--RYRMVALVHGETSTGVLNP---AEAIGA 148 (353)
T ss_dssp CEEEEECSHHHHHHHHHHHHTTCCEEEEECC--TTSCCCHHHHHHHHHHS--CCSEEEEESEETTTTEECC---HHHHHH
T ss_pred cEEEEcCCCchHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHHHHhC--CCCEEEEEccCCCcceecC---HHHHHH
Confidence 999999999875 45667899999999984 35679999999999852 3557788999999999998 457778
Q ss_pred HHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc-ccccccceEEEEeeCChhHH
Q 017967 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLA 326 (363)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~ 326 (363)
+|+++|+++|+||+|. +.... ..+..+ ...+++.|++|.+ |.+| +||+ +++ ++.+
T Consensus 149 l~~~~~~~li~D~a~~-~~~~~-----~~~~~~----~~d~~~~s~~K~~~~~~g--~G~~--~~~-~~~~ 204 (353)
T 2yrr_A 149 LAKEAGALFFLDAVTT-LGMLP-----FSMRAM----GVDYAFTGSQKCLSAPPG--LAPI--AAS-LEAR 204 (353)
T ss_dssp HHHHHTCEEEEECTTT-TTTSC-----CCHHHH----TCSEEECCTTSTTCCCSS--CEEE--EEC-HHHH
T ss_pred HHHHcCCeEEEEcCcc-ccccc-----cccccc----CceEEEecCcccccCCCc--eEEE--EEC-HHHH
Confidence 8999999999999995 32111 122222 2357788999955 5456 6999 666 5533
No 148
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.83 E-value=1.3e-19 Score=173.67 Aligned_cols=199 Identities=19% Similarity=0.085 Sum_probs=141.9
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC-CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
+++++|+.|.| .+.+.+.+++.+.+.. ..|. +..+..+||+++++++.. +++++ +.||+
T Consensus 22 ~~~~~l~~~~p-------~~~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~~gt 81 (391)
T 3dr4_A 22 SDLPRISVAAP-------RLDGNERDYVLECMDT---TWISSVGRFIVEFEKAFADYCGV--------KHAIA--CNNGT 81 (391)
T ss_dssp ------CCCCC-------CCCSSHHHHHHHHHHH---TCCSSCSHHHHHHHHHHHHHHTC--------SEEEE--ESSHH
T ss_pred CCCceeccCCC-------CCCHHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHhCC--------CcEEE--eCCHH
Confidence 37888888775 2335666666665544 2355 678999999999999743 25656 89999
Q ss_pred HHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017967 162 GSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (363)
Q Consensus 162 ~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~N 240 (363)
+|++++ +..+ +.+||+|+++.|+|..+...++..|++++.++++ ++++++|++.+++.++ +++++++ ++|
T Consensus 82 ~al~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~---~~~~~v~---~~n 152 (391)
T 3dr4_A 82 TALHLA--LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDND-PRTFNLDAAKLEALIT---PRTKAIM---PVH 152 (391)
T ss_dssp HHHHHH--HHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCGGGSGGGCC---TTEEEEC---CBC
T ss_pred HHHHHH--HHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecC-ccccCcCHHHHHHhcC---CCceEEE---EEC
Confidence 998888 4444 5799999999999999999999999999999985 3568899999998876 3455555 578
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc-CCCCCCchhHHHHHHhcCCeEEEEEcCc--cccccccccceEEE
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMN 317 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~S--K~~~l~G~RvG~i~ 317 (363)
|||...+ +++|.++|+++|+++|+|++|.... +.+. .. .... .+.+.||| |.+ +|.|.|++
T Consensus 153 ~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-----~~---~~~~--di~~~S~s~~K~l--~~g~gg~~- 216 (391)
T 3dr4_A 153 LYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGK-----KS---GSLG--DCATFSFFGNAII--TTGEGGMI- 216 (391)
T ss_dssp GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE-----ET---TSSS--SEEEEECBTTSSS--CCBSCEEE-
T ss_pred CCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCe-----ee---cccC--CEEEEECCCCCcC--CcCCeEEE-
Confidence 9999866 5667778999999999999998533 2211 00 0011 26677777 666 45679999
Q ss_pred EeeCChhHHH
Q 017967 318 VVCSSSDLAA 327 (363)
Q Consensus 318 ~v~~~~~~~~ 327 (363)
++++++..+
T Consensus 217 -~~~~~~~~~ 225 (391)
T 3dr4_A 217 -TTNDDDLAA 225 (391)
T ss_dssp -EESCHHHHH
T ss_pred -EECCHHHHH
Confidence 788776333
No 149
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.83 E-value=9.4e-19 Score=170.77 Aligned_cols=225 Identities=12% Similarity=0.093 Sum_probs=150.1
Q ss_pred eeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC--CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHH
Q 017967 88 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (363)
Q Consensus 88 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (363)
.+++.| .....++..+...+...........+.|. +.....++++++++++.. ++.++ +.+|++|+.
T Consensus 75 ~~~~~P-i~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g~-------~~~v~---~~sG~~Ai~ 143 (445)
T 1qgn_A 75 DAITTP-VVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGA-------ESTLL---MASGMCAST 143 (445)
T ss_dssp SBSSCC-BCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTC-------SEEEE---ESCHHHHHH
T ss_pred CCcCCC-cccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhCC-------CcEEE---eCCHHHHHH
Confidence 444444 23445666666655433222121124443 344567999999999632 23444 455669988
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCc-EEEEEcCCCC
Q 017967 166 LAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS-FILLHGCAHN 240 (363)
Q Consensus 166 l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~i~~p~N 240 (363)
++ +..++.+||+|+++.|.|.+.... ++..|++++.++.+ |++.+++++++ ++ +++++++|+|
T Consensus 144 ~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~ai~~---~tv~lV~le~p~N 211 (445)
T 1qgn_A 144 VM--LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-------DVGALELALNQ---KKVNLFFTESPTN 211 (445)
T ss_dssp HH--HHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-------CHHHHHHHHHH---SCEEEEEEESSCT
T ss_pred HH--HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhcc---CCCCEEEEeCCCC
Confidence 88 445578999999999999987764 55789999988762 89999999984 35 7888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEe
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVV 319 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v 319 (363)
|||.+++ +++|.++|+++|+++|+|++|....... + .+. ...++++|+||.+|..| .|+||+ +
T Consensus 212 ptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~------~----~~~-g~Div~~S~sK~~gg~gd~~~G~l--~ 275 (445)
T 1qgn_A 212 PFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQK------A----LAL-GADLVLHSATKFLGGHNDVLAGCI--S 275 (445)
T ss_dssp TTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC------T----TTT-TCSEEEECTTTTTTCSSSCCCEEE--E
T ss_pred CCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC------c----ccc-CCEEEEECCcccccccccceEEEE--E
Confidence 9999987 5577788999999999999998654321 1 111 34588999999998555 479999 6
Q ss_pred eCChhHHHHHHHHHHhhhccccCCCchHHHHHHhccc
Q 017967 320 CSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
+. ++.++ .+...........+++...++...|
T Consensus 276 ~~-~~l~~----~l~~~~~~~g~~~~~~~a~~~~~~l 307 (445)
T 1qgn_A 276 GP-LKLVS----EIRNLHHILGGALNPNAAYLIIRGM 307 (445)
T ss_dssp EC-HHHHH----HHHHHHHHHCCCCCHHHHHHHHHHG
T ss_pred EC-HHHHH----HHHHHHHHhCCCCCHHHHHHHHHhH
Confidence 64 66444 4433332223345565555544443
No 150
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.83 E-value=2.2e-19 Score=174.20 Aligned_cols=239 Identities=13% Similarity=0.094 Sum_probs=155.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|......|+ ..+.+.+++.+.++......| +.....++.+.+++++ + .+++|++ ++||++|
T Consensus 53 ~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~---~~~~v~~--~~ggsea 120 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGH--AHPEVIEALKVAMEKGTSFGA-PCALENVLAEMVNDAV----P---SIEMVRF--VNSGTEA 120 (427)
T ss_dssp EEEESSGGGTTCTTCB--TCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHS----T---TCSEEEE--ESSHHHH
T ss_pred EEEECCCchhhhccCC--CCHHHHHHHHHHHHhCCCcCC-CCHHHHHHHHHHHHhC----C---CCCEEEE--eCCHHHH
Confidence 6899998875333333 367788887776644322333 3344455555555553 2 2578988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC-CC-------------------CeEEEecccCCCCCCCHHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RV-------------------PWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~-------------------~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
++++..+...+..+++|++.+|+|.++...+... |. .+..++. -|++.|++.+
T Consensus 121 ~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l 193 (427)
T 3fq8_A 121 CMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKALF 193 (427)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHHH
Confidence 9998654444445589999999997654332211 11 1223332 1899999999
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCCC-HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
++.+++++++++..++|++|...+ .+.+++|.++|++||+++|+||+|.+| ..+. ..... ......+ +.||
T Consensus 194 ~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~---~~~~~-~~~~~~d---i~t~ 265 (427)
T 3fq8_A 194 AENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY---GGVQE-KFGVTPD---LTTL 265 (427)
T ss_dssp HHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT---THHHH-HTTCCCS---EEEE
T ss_pred HhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc---chhhH-hcCCCCC---hhhh
Confidence 875555667776667777887766 555999999999999999999999988 4321 12221 1222223 4689
Q ss_pred ccccccccccceEEEEeeCChhHHHHHHHHHHhhh---ccccCCCchHHHHHHhcccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA---RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~---~~~~~~~s~~~q~~~~~~l~ 357 (363)
||.++ +|+|+||+ +++ ++ +++.+.... ....++.+++++.++...|+
T Consensus 266 sK~~~-~G~~~G~~--~~~-~~----~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~ 315 (427)
T 3fq8_A 266 GKIIG-GGLPVGAY--GGK-RE----IMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLE 315 (427)
T ss_dssp CGGGG-TTSSCEEE--EEC-HH----HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred hhhhh-CCcceEEE--EEc-HH----HHHhhccCCCccccCCCCcCHHHHHHHHHHHH
Confidence 99999 89999999 664 66 555444321 22334568888888776664
No 151
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.82 E-value=9.5e-20 Score=178.70 Aligned_cols=251 Identities=12% Similarity=0.021 Sum_probs=155.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-|+ ..+.+.+++.+.+.... ..|....+..+.++++++++....+ ...++|++ |+||++|
T Consensus 51 ~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~ggseA 123 (459)
T 4a6r_A 51 KIIDGMAGLWCVNVGY--GRKDFAEAARRQMEELP-FYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFY--TNSGSES 123 (459)
T ss_dssp EEEETTHHHHTCTTCB--CCHHHHHHHHHHHHHCS-CCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEE--ESSHHHH
T ss_pred EEEECCCchhcccCCC--CCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCchHHH
Confidence 6899988854333333 35677777766554321 2233333444555555555544332 23578988 9999999
Q ss_pred HHHHHHHHHHh------CCCCEEEEcCCCCcchHHHHhhCCC-------------CeEEEecc---cCCCCCCC------
Q 017967 164 LRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYY---DPKTVGLD------ 215 (363)
Q Consensus 164 l~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~---~~~~~~~d------ 215 (363)
++.+..++... .+++.|++.+|+|.++.......+. .+..++.. ...++ .|
T Consensus 124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~ 202 (459)
T 4a6r_A 124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV 202 (459)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence 99985554332 2468999999999887654432211 22333320 00112 34
Q ss_pred --HHHHHHHHHcCC-CCcEEEEEcCCCCC-CCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH
Q 017967 216 --FEGMIADIKAAP-GGSFILLHGCAHNP-TGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (363)
Q Consensus 216 --~~~l~~~l~~~~-~~~~~~~i~~p~NP-TG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (363)
++.|++.+.+.. +++.+++ ++|+|+ +|. .++.+.+++|.++|++||+++|+||+|.+|...+. ...... .
T Consensus 203 ~~~~~le~~i~~~~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~---~~~~~~-~ 277 (459)
T 4a6r_A 203 VAARWLEEKILEIGADKVAAFV-GEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE---WFGHQH-F 277 (459)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSHHHH-H
T ss_pred HHHHHHHHHHHHcCCCCEEEEE-ECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc---cchHhh-c
Confidence 788888886422 2344444 555554 454 55899999999999999999999999999865431 222222 2
Q ss_pred hcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHH---hhhccccCCCchHHHHHHhcccc
Q 017967 291 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK---RLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 291 ~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~---~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+..++++ +|||.++..|+|+||+ +++ ++ +++.+. .......++.++++|.++...|+
T Consensus 278 ~~~pdi~---t~sK~l~gg~~~lg~v--~~~-~~----i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 337 (459)
T 4a6r_A 278 GFQPDLF---TAAKGLSSGYLPIGAV--FVG-KR----VAEGLIAGGDFNHGFTYSGHPVCAAVAHANVA 337 (459)
T ss_dssp TCCCSEE---EECGGGGTTSSCCEEE--EEC-HH----HHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHH
T ss_pred CCCCCee---ehhhhhcCCCCCccce--eeC-HH----HHHHhhcCCCcccCCCCCCCHHHHHHHHHHHH
Confidence 3333433 6899998544999999 665 77 444444 22223345778889988877766
No 152
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.82 E-value=1.3e-19 Score=173.87 Aligned_cols=236 Identities=15% Similarity=0.085 Sum_probs=156.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC--CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..+.+...-|+ ..+.+.+++.+.+.... +.| .+.....++++.+++++ + .+++++ |+||+
T Consensus 37 ~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----~----~~~v~~--~~gg~ 103 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGY--NHAKFNAKIKAQVDKLL-HTSNLYYNENIAAAAKNLAKAS----A----LERVFF--TNSGT 103 (395)
T ss_dssp EEEESSHHHHTCTTCB--SCHHHHHHHHHHHTTCS-CCCTTSBCHHHHHHHHHHHHHH----T----CSEEEE--ESSHH
T ss_pred EEEECCCcHHhccCCC--CCHHHHHHHHHHHHhcc-ccccccCCHHHHHHHHHHHHhc----C----CCeEEE--eCCHH
Confidence 6899998854333332 35677777776664321 212 12334456666666664 2 378888 99999
Q ss_pred HHHHHHHHHHHHh-----CCCCEEEEcCCCCcchHHHHhhC-------------CCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 162 GSLRLAAALIERY-----FPGAKVLISSPTWGNHKNIFNDA-------------RVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 162 ~al~l~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
+|++++..++... .++|+|++.+|+|.++....... +.++..++. .|++.|++++
T Consensus 104 ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 176 (395)
T 3nx3_A 104 ESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLV 176 (395)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhc
Confidence 9999985544333 46799999999998775433322 234444443 2789998887
Q ss_pred HcCCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 224 KAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
+ ++++++++.+++|++|.. ++.+++++|.++|++||+++|+||+|.+|...+. ...... .+...+ +.+|
T Consensus 177 ~---~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~---~~~~~~-~~~~~d---~~t~ 246 (395)
T 3nx3_A 177 N---EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK---FFAYEH-AQILPD---IMTS 246 (395)
T ss_dssp C---TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGG-GTCCCS---EEEE
T ss_pred c---CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc---chhHHh-cCCCCC---EEEe
Confidence 6 345566656666777766 7889999999999999999999999998864321 111111 121222 4478
Q ss_pred ccccccccccceEEEEeeCChhHHHHH-HHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSSDLAARV-KSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~~~~~~-~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
||.++ .|+|+||+ +++ ++ + ++.+.........+.++++|.++...|+
T Consensus 247 sK~~~-~G~~~G~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~aa~aal~ 294 (395)
T 3nx3_A 247 AKALG-CGLSVGAF--VIN-QK----VASNSLEAGDHGSTYGGNPLVCAGVNAVFE 294 (395)
T ss_dssp CGGGT-TTSCCEEE--EEC-HH----HHHHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred ccccc-CCCceEEE--EEc-hh----hhhhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence 99998 59999999 665 55 4 5555444334455788888888877665
No 153
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.82 E-value=2.7e-19 Score=171.95 Aligned_cols=192 Identities=17% Similarity=0.092 Sum_probs=138.4
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCCcc--hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPIEG--LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFP 176 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~G--~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~ 176 (363)
|.+.+.+.+++.+.+.. .|.+..| ..++|+++|+++.. +++++ ++||+++++++ +..+ +.+
T Consensus 8 p~~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~--~~~l~~~~ 71 (394)
T 1o69_A 8 PHMGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSKS--------ENALA--LNSATAALHLA--LRVAGVKQ 71 (394)
T ss_dssp ----CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHH--HHHTTCCT
T ss_pred CCCCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHcCCCC
Confidence 34455666676665543 3656567 89999999999732 57877 99999999988 4444 579
Q ss_pred CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHH
Q 017967 177 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (363)
Q Consensus 177 gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~ 256 (363)
||+|+++.|+|..+...++..|++++.++++ +++.+|++.+++.+++.+.+++++++++ |||.. .++++|.+
T Consensus 72 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~ 143 (394)
T 1o69_A 72 DDIVLASSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVE 143 (394)
T ss_dssp TCEEEEESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHH
T ss_pred CCEEEECCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHH
Confidence 9999999999999999999999999999984 4678999999999985321344555553 89965 45677778
Q ss_pred HHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHH
Q 017967 257 VIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (363)
Q Consensus 257 ~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~ 327 (363)
+|+++|+++|+||+|. ++.+.+. .. ..... +.+.||||..+++|.|+||+ ++++++.++
T Consensus 144 l~~~~~~~li~Dea~~~g~~~~~~--~~------~~~~~--~~~~s~s~~K~l~~~~~G~~--~~~~~~l~~ 203 (394)
T 1o69_A 144 ICKENDIVLIEDAAEALGSFYKNK--AL------GTFGE--FGVYSYNGNKIITTSGGGML--IGKNKEKIE 203 (394)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTE--ET------TSSSS--EEEEECCTTSSSCCSSCEEE--EESCHHHHH
T ss_pred HHHHcCCEEEEECcCcccceeCCc--cc------ccccC--cEEEEEeCCccCCCCCceEE--EECCHHHHH
Confidence 8999999999999998 5655321 00 01112 45566654445567899999 776677333
No 154
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.82 E-value=2.1e-19 Score=174.51 Aligned_cols=247 Identities=16% Similarity=0.112 Sum_probs=157.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-|+ ..+.+.+++.+.+...... |.+.....+|++++++++. ..++|++ ++||++|
T Consensus 54 ~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~~~~-~~~~~~~~~l~~~la~~~~-------~~~~v~~--~~~Gsea 121 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGH--ANDRVVEALKAVAERGTSF-GAPTEIENKLAKLVIERVP-------SIEIVRM--VNSGTEA 121 (429)
T ss_dssp EEEESCGGGTTCTTCB--SCHHHHHHHHHHHHHCSCC-SSCCHHHHHHHHHHHHHST-------TCSEEEE--ESSHHHH
T ss_pred EEEECCCChhhcccCC--CCHHHHHHHHHHHhhCcCc-CCCCHHHHHHHHHHHHhCC-------CCCEEEE--eCChHHH
Confidence 7899998875333332 3567777776665443323 4467778899999999853 2578988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEEecccCCCCC------------CCHHHHHHHHHcCCCCc
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVG------------LDFEGMIADIKAAPGGS 230 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~------------~d~~~l~~~l~~~~~~~ 230 (363)
++++..+.....++++|++.+|+|.++...+. ..|..+..++........ -|++.+++.+++.++++
T Consensus 122 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 3k28_A 122 TMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDI 201 (429)
T ss_dssp HHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence 99985544333467899999999976643332 223222222210000000 17899999887533344
Q ss_pred EEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 231 FILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 231 ~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
.++++...+|++|... +.+++++|.++|++||+++|+||+|.+| ..+ ...... ......+ +.+|||.++ .
T Consensus 202 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g---~~~~~~-~~~~~~d---i~t~sK~~~-~ 272 (429)
T 3k28_A 202 ACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVA---YNCGQG-YYGVTPD---LTCLGKVIG-G 272 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSS---TTHHHH-HHTCCCS---EEEECGGGG-T
T ss_pred EEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC---cchHHH-HhCCCCc---eehhhhhhc-C
Confidence 4555444444555544 6788999999999999999999999998 432 122222 2232233 347999998 6
Q ss_pred cccceEEEEeeCChhHHHHHHHHHHhhh---ccccCCCchHHHHHHhccccc
Q 017967 310 AERIGAMNVVCSSSDLAARVKSQLKRLA---RPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 310 G~RvG~i~~v~~~~~~~~~~~~~l~~~~---~~~~~~~s~~~q~~~~~~l~~ 358 (363)
|+|+||+ +++ ++ +++.+.... ....++.++++|.++...|+.
T Consensus 273 G~~iG~~--~~~-~~----~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~ 317 (429)
T 3k28_A 273 GLPVGAY--GGK-AE----IMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQ 317 (429)
T ss_dssp TSCCEEE--EEC-HH----HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHT
T ss_pred CCCeEEE--EEc-HH----HHhhhccCCCccccCCCCCChHHHHHHHHHHHH
Confidence 9999999 665 66 555444321 223457788888888776653
No 155
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.82 E-value=1.4e-19 Score=172.02 Aligned_cols=186 Identities=16% Similarity=0.160 Sum_probs=142.2
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCEE
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV 180 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~V 180 (363)
+.+.+.+++.+.+.. ..|.+..+..++++++++++.. +++++ +.||++|++++ +... +.+||+|
T Consensus 14 ~~~~v~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~sGt~al~~a--l~~~~~~~gd~V 78 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRH---GQYILGPEVTELEDRLADFVGA--------KYCIS--CANGTDALQIV--QMALGVGPGDEV 78 (367)
T ss_dssp HHHHHHHHHHHHHHH---CCCSSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHTTCCTTCEE
T ss_pred cCHHHHHHHHHHHhc---CCccCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHhCCCCcCEE
Confidence 456777777766644 2466778899999999999733 36766 89999999888 4444 5699999
Q ss_pred EEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Q 017967 181 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (363)
Q Consensus 181 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~ 260 (363)
+++.|+|..+...++..|++++.++++ ++++.+|++.++++++ +++++++ |+||||...+ +++|.++|++
T Consensus 79 i~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~---~~~~~v~---~~~~~G~~~~---~~~i~~la~~ 148 (367)
T 3nyt_A 79 ITPGFTYVATAETVALLGAKPVYVDID-PRTYNLDPQLLEAAIT---PRTKAII---PVSLYGQCAD---FDAINAIASK 148 (367)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCGGGTGGGCC---TTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred EECCCccHHHHHHHHHcCCEEEEEecC-CccCCcCHHHHHHhcC---cCCcEEE---eeCCccChhh---HHHHHHHHHH
Confidence 999999999999999999999999985 3458899999999885 3455555 7899997665 5667777999
Q ss_pred cCCeEEEecCCCC-CcCCCCCCchhHHHHHHhcCCeEEEEEcC--ccccccccccceEEEEeeCChhH
Q 017967 261 KNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 261 ~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~~l~G~RvG~i~~v~~~~~~ 325 (363)
+|+++|+|++|.. ..+++. ... ..+ .+++.|| +|.++.+|. .|++ ++++++.
T Consensus 149 ~~~~li~D~a~~~g~~~~~~---~~~-----~~~--di~~~Sf~~~K~l~~~g~-gg~~--~~~~~~l 203 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGASYKGK---RSC-----NLS--TVACTSFFPSAPLGCYGD-GGAI--FTNDDEL 203 (367)
T ss_dssp TTCCBEEECTTTTTCEETTE---ETT-----SSS--SEEEEECCTTSSSCCSSC-CEEE--EESCHHH
T ss_pred cCCEEEEECccccCCeECCe---ecc-----CCC--CEEEEECCCCCcCCCcCc-eeEE--EeCCHHH
Confidence 9999999999874 333211 000 111 4778887 899996687 8998 7877773
No 156
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.82 E-value=7.5e-19 Score=169.93 Aligned_cols=165 Identities=16% Similarity=0.109 Sum_probs=129.7
Q ss_pred CCCCCC--cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----
Q 017967 120 KEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---- 193 (363)
Q Consensus 120 ~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---- 193 (363)
+.|... .+..++++.+++++.. +++++ |.||++|+.++ +..++.+||+|+++.|.|......
T Consensus 48 ~~y~~~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a~~~a--l~~l~~~gd~vi~~~~~~~~~~~~~~~~ 115 (412)
T 2cb1_A 48 YVYARQKDPTAKALEERLKALEGA--------LEAVV--LASGQAATFAA--LLALLRPGDEVVAAKGLFGQTIGLFGQV 115 (412)
T ss_dssp CSBTTTCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHTTCCTTCEEEEETTCCHHHHHHHHHT
T ss_pred cCcCCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchhHHHHHHHH
Confidence 567643 6788999999999632 36766 99999999888 444467999999999999876554
Q ss_pred HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 194 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
++..|++++.++. |++.+++.++ ++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..
T Consensus 116 ~~~~g~~~~~~~~--------~~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~~ 181 (412)
T 2cb1_A 116 LSLMGVTVRYVDP--------EPEAVREALS---AKTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFGA 181 (412)
T ss_dssp TTTTTCEEEEECS--------SHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGT
T ss_pred HHHcCCEEEEECC--------CHHHHHHHhc---cCCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcc
Confidence 4467999888875 3889988886 35778888999999999986 77788889999999999999987
Q ss_pred CcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
+.... . +. .....+++.|+||.++.+|.|+|++ ++.+
T Consensus 182 ~~~~~---~--~~-----~~~~di~~~S~~K~~~~~~~~~G~~--~~~~ 218 (412)
T 2cb1_A 182 AGALC---R--PL-----AWGAHVVVESLTKWASGHGSVLGGA--VLSR 218 (412)
T ss_dssp TTTSC---C--GG-----GGTCSEEEEETTTTTTCSSCCCCEE--EEEC
T ss_pred ccccC---C--cc-----ccCCeEEEECCcccccCCCCcEEEE--EEec
Confidence 73211 1 11 1246789999999999899999999 5443
No 157
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.82 E-value=1.7e-19 Score=171.50 Aligned_cols=190 Identities=14% Similarity=0.038 Sum_probs=131.9
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCC--cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g 177 (363)
..+++.+.+++.+... ..|.+. .-..++++.+++++. .+.+.+.+++ |.||+++++++ +...+.+|
T Consensus 28 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~g----~~~~~~~i~~--~~ggt~al~~~--~~~~~~~g 95 (376)
T 3f0h_A 28 VMSSEEVRAIGAEQVP----YFRTTEFSSTMLENEKFMLEYAK----APEGSKAVFM--TCSSTGSMEAV--VMNCFTKK 95 (376)
T ss_dssp CCCCHHHHHHHTSCCC----CCSSHHHHHHHHHHHHHHHHHHT----CCTTCEEEEE--SSCHHHHHHHH--HHHHCCTT
T ss_pred CCCcHHHHHHhcCCCC----CCCCHHHHHHHHHHHHHHHHHhC----CCCCceEEEE--cCChhHHHHHH--HHhccCCC
Confidence 3456777777543221 123221 223455566666643 2222234544 88999999988 44456799
Q ss_pred CEEEEcCCCCcchH--HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHH
Q 017967 178 AKVLISSPTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (363)
Q Consensus 178 d~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~ 255 (363)
|+|+++.|+|..+. ..+...|++++.++.+ .++.+|++.+++.+. ++++++++++||||||.+++ +++|.
T Consensus 96 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~ 167 (376)
T 3f0h_A 96 DKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDN---QNFTGLLVNVDETSTAVLYD---TMMIG 167 (376)
T ss_dssp CCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTT---SCCCEEEEESEETTTTEECC---HHHHH
T ss_pred CeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhc---cCceEEEEecccCCcceecC---HHHHH
Confidence 99999999776654 3467889999999983 457899999998765 35668888999999999998 77788
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChh
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSD 324 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~ 324 (363)
++|+++|+++|+|++|......- ... .....+++.|+||.++ .+| +|++ +++ ++
T Consensus 168 ~l~~~~~~~li~D~~~~~~~~~~------~~~----~~~~d~~~~s~~K~l~~~~G--~g~~--~~~-~~ 222 (376)
T 3f0h_A 168 EFCKKNNMFFVCDCVSAFLADPF------NMN----ECGADVMITGSQKVLACPPG--ISVI--VLA-PR 222 (376)
T ss_dssp HHHHHTTCEEEEECTTTTTTSCC------CHH----HHTCSEEEEETTTTTCCCSS--CEEE--EEC-HH
T ss_pred HHHHHcCCEEEEEcCccccCccc------ccc----ccCccEEEecCcccccCCCc--eEEE--EEC-HH
Confidence 88999999999999987654321 111 1123588899999998 566 5777 554 66
No 158
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.82 E-value=2.7e-19 Score=177.93 Aligned_cols=205 Identities=13% Similarity=0.023 Sum_probs=150.7
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcE--EEEeccchhHHHHHHHHHHHHhCCC--
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPG-- 177 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i--~~~~t~ggt~al~l~~~l~~~~~~g-- 177 (363)
+.+.+.+++........ ..|....+..++++++++++....+...+++++ ++ |.||++++.++...+ ..+|
T Consensus 112 ~~~~~~~~~~~~~~~~~-~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~--t~ggt~a~~~al~a~--~~~g~~ 186 (514)
T 3mad_A 112 HIAFLNEVYALQSQSNP-LHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTV--TSGGTESLLLAMKTY--RDWARA 186 (514)
T ss_dssp HHHHHHHHHHHHTTCCT-TCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEE--ESSHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHhhcCC-cccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEE--cCcHHHHHHHHHHHH--HHHhhh
Confidence 34555555554443322 455556677888888877777666665555777 66 999999999884433 3344
Q ss_pred ------CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHH
Q 017967 178 ------AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQW 251 (363)
Q Consensus 178 ------d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~ 251 (363)
|+|+++.|+|..+...++..|++++.++++ .++.+|++.|+++++ ++++++++++||||||.+.+ +
T Consensus 187 ~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~---~~~~~v~~~~~~nptG~~~~---l 258 (514)
T 3mad_A 187 TKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD--ADYRADVAAMREAIT---PNTVVVAGSAPGYPHGVVDP---I 258 (514)
T ss_dssp HHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC--TTSCBCHHHHHHHCC---TTEEEEEEETTCTTTCCCCC---H
T ss_pred hcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC--CCCCCCHHHHHHHhc---cCCEEEEEeCCCCCCccccC---H
Confidence 999999999999999999999999999984 368899999999987 35778888999999999987 5
Q ss_pred HHHHHHHHhcCCeEEEecCCCCCcCC---CCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 252 EKIADVIQEKNHIPFFDVAYQGFASG---SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 252 ~~i~~~~~~~~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
++|.++|+++|+++|+|++|.++... ....+...+. .....-.+++.|++|.++ .|.++||+ ++.++.
T Consensus 259 ~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~--~~~~~~ 329 (514)
T 3mad_A 259 PEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD--FRLEGVTSVSADTHKYGY-GAKGTSVI--LYRRPD 329 (514)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS--TTSTTCCEEEECTTTTTC-CCSSCEEE--EESSHH
T ss_pred HHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc--ccCCCCcEEEECchhccC-CCCCeEEE--EEeCHH
Confidence 67777899999999999999987531 0000000000 011234677899999864 78999999 777654
No 159
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.82 E-value=1.9e-19 Score=171.45 Aligned_cols=197 Identities=13% Similarity=0.037 Sum_probs=138.3
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCC--cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh---
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--- 174 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~--- 174 (363)
..+.+.+.+++.+... ..|.+. ....++++++++++.... .+++++|++ |.||+++++++ +..+.
T Consensus 14 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~--~~g~t~al~~~--~~~~~~~~ 83 (385)
T 2bkw_A 14 IILSGAVQKALDVPSL----GHTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVL--AGSGTLGWDIF--ASNFILSK 83 (385)
T ss_dssp CCCCHHHHHTTSCCCC----CTTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEE--ESCTTHHHHHH--HHHHSCTT
T ss_pred cCchHHHHHHHhcccc----ccCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEE--cCchHHHHHHH--HHHHhccC
Confidence 4456777776533221 123232 246778899999975532 234678888 99999999988 34444
Q ss_pred CCCCEEEEc-CCCCcchH-HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHH
Q 017967 175 FPGAKVLIS-SPTWGNHK-NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 252 (363)
Q Consensus 175 ~~gd~Vlv~-~P~y~~~~-~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~ 252 (363)
.+||+|+++ .|+|..+. ..++..|++++.+++. +.++.+|++.+++++++ .+++++++++|+||||.+++ ++
T Consensus 84 ~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~---l~ 157 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQ--NSYGAVTVTHVDTSTAVLSD---LK 157 (385)
T ss_dssp CSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHH--SCCSEEEEESEETTTTEECC---HH
T ss_pred CCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhc--CCCCEEEEEccCCCcCeEcC---HH
Confidence 799999888 55676663 6778899999999872 23567999999999974 23557778999999999998 45
Q ss_pred HHHHHHHhc--CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc-ccccccceEEEEeeCChhHHH
Q 017967 253 KIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAA 327 (363)
Q Consensus 253 ~i~~~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~l~G~RvG~i~~v~~~~~~~~ 327 (363)
+|.++|+++ |+++|+|++|...... . .+ ......+++.|+||.+ |.+|+ ||+ +++ ++.++
T Consensus 158 ~i~~~~~~~~~~~~li~D~a~~~~~~~---~---~~----~~~~~d~~~~s~~K~~~~~~G~--G~~--~~~-~~~~~ 220 (385)
T 2bkw_A 158 AISQAIKQTSPETFFVVDAVCSIGCEE---F---EF----DEWGVDFALTASQKAIGAPAGL--SIS--LCS-SRFMD 220 (385)
T ss_dssp HHHHHHHHHCTTSEEEEECTTTTTTSC---C---CT----TTTTCSEEEEESSSTTCCCSCE--EEE--EEC-HHHHH
T ss_pred HHHHHHHhhCCCCEEEEECccccCCcc---c---cc----cccCceEEEecCccccccCCcc--eEE--EEc-HHHHH
Confidence 778889999 9999999998632211 0 11 1123467889999965 45675 999 665 55443
No 160
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.82 E-value=4.2e-19 Score=171.71 Aligned_cols=194 Identities=19% Similarity=0.093 Sum_probs=141.8
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCCcc----hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-h
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-Y 174 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~ 174 (363)
+.+++.+.+++.+.+.......|++..| ..++++.+++++.. +++++ +.+|++++.++ +..+ +
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~--------~~~i~--~~~gt~al~~~--~~~~~~ 79 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV--------PYCVP--TTSGSTALMLA--LEALGI 79 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHTTC
T ss_pred CCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHcCC
Confidence 4456788888877765433233776667 66777777777522 13444 67789998888 4444 5
Q ss_pred CCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHH
Q 017967 175 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 175 ~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i 254 (363)
.+||+|+++.|+|..+...++..|++++.++++ ++++.+|++.+++.+++ +++++++ +||||... ++++|
T Consensus 80 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~~---~~~~G~~~---~~~~i 149 (418)
T 2c81_A 80 GEGDEVIVPSLTWIATATAVLNVNALPVFVDVE-ADTYCIDPQLIKSAITD---KTKAIIP---VHLFGSMA---NMDEI 149 (418)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHGGGCCT---TEEEECC---BCCTTCCC---CHHHH
T ss_pred CCcCEEEECCCccHhHHHHHHHcCCEEEEEecC-CCCCCcCHHHHHHhhCC---CCeEEEE---eCCcCCcc---cHHHH
Confidence 699999999999999999999999999999984 34688999999988862 4556654 46999874 56778
Q ss_pred HHHHHhcCCeEEEecCCCCCc-CCCCCCchhHHHHHHhcCCeEEEEEcC--ccccccccccceEEEEeeCChhHHHHH
Q 017967 255 ADVIQEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 255 ~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
.++|+++|+++|+|++|..+. ++.. .. .... .+.+.|| ||.++. | |+||+ ++++++.++++
T Consensus 150 ~~~~~~~~~~li~D~a~~~~~~~~~~-----~~---~~~~--~~~~~s~s~~K~~~~-g-~~g~~--~~~~~~l~~~~ 213 (418)
T 2c81_A 150 NEIAQEHNLFVIEDCAQSHGSVWNNQ-----RA---GTIG--DIGAFSCQQGKVLTA-G-EGGII--VTKNPRLFELI 213 (418)
T ss_dssp HHHHHHTTCEEEEECTTCTTCEETTE-----ET---TSSS--SEEEEECCTTSSSCS-S-SCEEE--EESCHHHHHHH
T ss_pred HHHHHHCCCEEEEECcccccCccCCE-----ec---cccc--ceEEEeccCCcccCC-C-CeEEE--EECCHHHHHHH
Confidence 888999999999999999886 4321 11 0111 2667777 999996 8 99999 77667744433
No 161
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.82 E-value=2e-19 Score=175.94 Aligned_cols=247 Identities=11% Similarity=-0.002 Sum_probs=154.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC-CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|......|+ ..+.+.+++.+.+..... ..+.+.....++++.+++++. .. .+ |++ |+||++
T Consensus 50 ~~lD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~--~~-v~~--~~ggse 118 (452)
T 3n5m_A 50 RYLDGMSGLWCVNSGY--GRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLG----GE--YV-IFF--SNSGSE 118 (452)
T ss_dssp EEEETTHHHHTCTTCB--CCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHT----SC--EE-EEE--ESSHHH
T ss_pred EEEECCcchhhccCCC--CCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCC----CC--ce-EEE--eCchHH
Confidence 6899998853333343 356778887776643211 111223334455555555532 11 23 766 999999
Q ss_pred HHHHHHHHHHHh---C---CCCEEEEcCCCCcchHHHHhhCCCC-------------eEEEecccCCCCCC-C-------
Q 017967 163 SLRLAAALIERY---F---PGAKVLISSPTWGNHKNIFNDARVP-------------WSEYRYYDPKTVGL-D------- 215 (363)
Q Consensus 163 al~l~~~l~~~~---~---~gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~-d------- 215 (363)
|++.+..++... . ++++|++.+|+|.++.......+.. +..++..+...+.. |
T Consensus 119 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (452)
T 3n5m_A 119 ANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV 198 (452)
T ss_dssp HHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence 999986554322 4 7799999999998876544433221 23333210000111 1
Q ss_pred --HHHHHHHHH-cCCCCcEEEEEcCC-CCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH
Q 017967 216 --FEGMIADIK-AAPGGSFILLHGCA-HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (363)
Q Consensus 216 --~~~l~~~l~-~~~~~~~~~~i~~p-~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (363)
++.|++.++ ..+++++++++.++ || ||.++ +.+.+++|.++|++||+++|+||+|.+|...+. ..... ..
T Consensus 199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~---~~~~~-~~ 273 (452)
T 3n5m_A 199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGK---AFGFM-NY 273 (452)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGG-GT
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccc---cchhh-hc
Confidence 889999887 22234566666666 89 99766 888899999999999999999999999865431 11111 11
Q ss_pred hcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHh------hhccccCCCchHHHHHHhcccc
Q 017967 291 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR------LARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 291 ~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~------~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+...+ +.+|||.++. | +|+||+ +++ ++ +++.+.. ......++.++++|.++...|+
T Consensus 274 ~~~~d---i~t~sK~l~~-G~~~ig~~--~~~-~~----i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 336 (452)
T 3n5m_A 274 DVKPD---IITMAKGITS-AYLPLSAT--AVK-RE----IYEAFKGKGEYEFFRHINTFGGNPAACALALKNLE 336 (452)
T ss_dssp TCCCS---EEEECGGGGT-TSSCCEEE--EEE-HH----HHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHH
T ss_pred CCCCC---EEeecccccC-CCcceEEE--EEC-HH----HHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHH
Confidence 22223 3368999985 9 999999 665 66 5555532 1123445778888888877665
No 162
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.82 E-value=7.3e-20 Score=179.30 Aligned_cols=249 Identities=13% Similarity=0.014 Sum_probs=155.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|.+...-|+ -.+.+.+++.+.+... ..|....+..+.+.++++++....+.. ..++|++ |+||++|
T Consensus 65 ~ylD~~~~~~~~~lGh--~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~--~~sGseA 137 (453)
T 4ffc_A 65 SFIDLGAGIAVTTVGA--SHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTAL--FNSGAEA 137 (453)
T ss_dssp EEEESSHHHHTCTTCT--TCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEE--ESSHHHH
T ss_pred EEEEcCCCcccCcCCC--CCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEE--eCcHHHH
Confidence 6899998854333333 2566777766655332 223333333444444444443322211 1468888 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCC--------------CCeEEEeccc--CCCCCCC--------HHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYD--PKTVGLD--------FEGM 219 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G--------------~~~~~v~~~~--~~~~~~d--------~~~l 219 (363)
++++..+......++.|++.+++|.++.......+ ..+..++... .+.++.+ ++.|
T Consensus 138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence 99985544333355899999999987765443221 1344555421 1223444 2344
Q ss_pred HHHHHcCCCCcEEEEEcCCCCCCC--CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEE
Q 017967 220 IADIKAAPGGSFILLHGCAHNPTG--IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (363)
Q Consensus 220 ~~~l~~~~~~~~~~~i~~p~NPTG--~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 297 (363)
++.+. ...+..++++|.||+| ...+.+.+++|.++|++||+++|+||+|.+|...+. ......+ ....+
T Consensus 218 ~~~i~---~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~---~~a~~~~-~~~pd-- 288 (453)
T 4ffc_A 218 ETQIG---AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA---WFASEHE-GIVPD-- 288 (453)
T ss_dssp HHHTC---GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSTHHHH-TCCCS--
T ss_pred HHhcC---CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc---cchhhhc-CCCcc--
Confidence 44332 2345666678899887 455788899999999999999999999999865431 1122221 22222
Q ss_pred EEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 298 ~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+.+|||.++. |+|+||+ +++ ++ +++.+........++.++++|.++...|+
T Consensus 289 -i~t~sK~~~~-G~~~G~~--~~~-~~----i~~~~~~~~~~~t~~~~~~~~aaa~aal~ 339 (453)
T 4ffc_A 289 -IVTMAKGIAG-GMPLSAV--TGR-AE----LMDAVYAGGLGGTYGGNPVTCAAAVAALG 339 (453)
T ss_dssp -EEEECGGGGT-TSSCEEE--EEE-HH----HHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred -hHhhhhhhcC-CcCeEEE--EEC-HH----HHhhhcccCcCCCCCcCHHHHHHHHHHHH
Confidence 4478999985 9999999 665 66 55555554455566888999988877665
No 163
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.81 E-value=6.7e-20 Score=176.13 Aligned_cols=213 Identities=15% Similarity=0.133 Sum_probs=140.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCc---chHH--HHH-----HHHHHHhcCCCCcccCCcEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GLAA--FNK-----VTAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---G~~~--lr~-----aia~~l~~~~~~~~~~~~i~ 153 (363)
+.|+|..|.+ +. ++.+.+++.+.+.......|+... |.+. +++ .+++++.. ++++|+
T Consensus 24 ~~i~~~~~~~------~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~------~~~~i~ 90 (407)
T 2dkj_A 24 EGLELIASEN------FV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA------AWANVQ 90 (407)
T ss_dssp TSEECCTTCC------CC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC------SEEECC
T ss_pred cceeeccCCC------CC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC------CcceEE
Confidence 7899998874 22 677888876665432224564332 4432 333 66666522 134454
Q ss_pred EEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH---HHHhhCCCCeEEEecc-cCCCCCCCHHHHHHHHHcCCCC
Q 017967 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK---NIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
+ ++ |++++.++. ...+.+||+|++++|+|..+. ..++..|.++..+++. +++++.+|++.+++.+++. +
T Consensus 91 ~--~s-Gt~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~ 163 (407)
T 2dkj_A 91 P--HS-GSQANMAVY--MALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH--R 163 (407)
T ss_dssp C--SS-HHHHHHHHH--HHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH--C
T ss_pred e--cc-hHHHHHHHH--HHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhc--C
Confidence 4 44 566988884 334679999999999998883 4455566654555542 2246789999999999731 3
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC-CcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l 308 (363)
++++++++|+|| ...+ +++|.++|+++|+++|+||+|.. +.+.+... .. .+ ...+++.||||. +
T Consensus 164 ~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~---~~--~~di~~~s~sK~--l 228 (407)
T 2dkj_A 164 PKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHP---NP---LP--YAHVVTSTTHKT--L 228 (407)
T ss_dssp CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSC---CC---TT--TCSEEEEESSGG--G
T ss_pred CeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccC---Cc---cc--cccEEEEecccc--C
Confidence 456666999998 4444 77888899999999999999987 54332111 00 11 257889999994 5
Q ss_pred ccccceEEEEeeCChhHHHHHHHHHHhhh
Q 017967 309 YAERIGAMNVVCSSSDLAARVKSQLKRLA 337 (363)
Q Consensus 309 ~G~RvG~i~~v~~~~~~~~~~~~~l~~~~ 337 (363)
+|.|+||+ ++++++ +++.+....
T Consensus 229 ~g~~~G~~--~~~~~~----~~~~l~~~~ 251 (407)
T 2dkj_A 229 RGPRGGLI--LSNDPE----LGKRIDKLI 251 (407)
T ss_dssp CCCSCEEE--EESCHH----HHHHHHHHH
T ss_pred CCCCceEE--EECCHH----HHHHHHhhh
Confidence 69999999 776566 444454443
No 164
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.81 E-value=2.6e-19 Score=175.13 Aligned_cols=239 Identities=15% Similarity=0.074 Sum_probs=147.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||++.|.....-++ .++.+.+++.+.+.... .| .+..++++++++++....+ ..++|++ ++||++|
T Consensus 58 ~~iD~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~--~~gg~eA 125 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGH--GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRF--TGSGTET 125 (453)
T ss_dssp EEEESCTTTTSCTTCB--TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEE--ESCHHHH
T ss_pred EEEECcccHhhcccCC--CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEE--eCCHHHH
Confidence 6889988864322232 46778888777664422 23 2356788888888866542 3678988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-----------CCCC------eEEEecccCCCCCCCHHHHHHHHHcC
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFND-----------ARVP------WSEYRYYDPKTVGLDFEGMIADIKAA 226 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-----------~G~~------~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (363)
++++..+...+..++.|++.+|+|.++...+.. .|+. +..++. .|++.+++.+++.
T Consensus 126 ~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~ 198 (453)
T 2cy8_A 126 TLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH 198 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc
Confidence 998855432244557899999999876543321 2331 222322 3899999998742
Q ss_pred CCCcEEEEEcCC-CCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc
Q 017967 227 PGGSFILLHGCA-HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (363)
Q Consensus 227 ~~~~~~~~i~~p-~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 304 (363)
++++++++ ++| +||||.+ .+.+++++|.++|++||+++|+||+|.+|..+ ...... ......++ .||||
T Consensus 199 ~~~~~~vi-~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g----~~~~~~-~~~~~~di---~s~sK 269 (453)
T 2cy8_A 199 GSDIAAFI-AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVG----NHGMQA-LLDVQPDL---TCLAK 269 (453)
T ss_dssp GGGEEEEE-ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTC----TTHHHH-HHTCCCSE---EEEEG
T ss_pred CCCEEEEE-ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccC----chhhhH-HhCCCCcE---EEECh
Confidence 22344554 555 4779976 47999999999999999999999999988322 122222 22222343 38999
Q ss_pred ccccccccceEEEEeeCChhHHHHHHHHHHh-----hhccccCCCchHHHHHHhccccc
Q 017967 305 NLGLYAERIGAMNVVCSSSDLAARVKSQLKR-----LARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 305 ~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~-----~~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
.++ +|+|+||+ +++ ++ +++.+.. ......++.+++++.++...|+.
T Consensus 270 ~l~-~G~~~G~v--~~~-~~----~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~ 320 (453)
T 2cy8_A 270 ASA-GGLPGGIL--GGR-ED----VMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDT 320 (453)
T ss_dssp GGG-TTSSCEEE--EEC-HH----HHTTSSSCC---------CCCCHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEE--ech-HH----HHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHH
Confidence 999 59999999 776 55 4444332 11122346778888877665543
No 165
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.81 E-value=7e-19 Score=169.85 Aligned_cols=181 Identities=18% Similarity=0.184 Sum_probs=135.4
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcC-CCCcchHHH-----
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS-PTWGNHKNI----- 193 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~----- 193 (363)
+.| +..|..+|++.+|+++... ..+++.++.+|++|+.++ +..++.|||+|+++. |.|..+...
T Consensus 54 ~~y-~~~~~~~Le~~lA~l~g~e-------~alv~p~~~sGt~Ai~~a--l~all~~GD~Vl~~~~~~y~~~~~~~~~~g 123 (409)
T 3jzl_A 54 YGY-DDEGRDTLERVYATVFKTE-------AALVRPQIISGTHAISTV--LFGILRPDDELLYITGQPYDTLEEIVGIRK 123 (409)
T ss_dssp TCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTSCSHHHHHHHH--HHHHCCTTCEEEECSSSCCTTHHHHHTSSS
T ss_pred CCC-ChhHHHHHHHHHHHHhCCC-------cEEEECCCccHHHHHHHH--HHHhcCCCCEEEEeCCCCcHhHHHHHhccc
Confidence 455 4457889999999996431 223211268999998877 566688999999998 999998854
Q ss_pred -----HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC----CCCCCCCCCCHHHHHHHHHHHHh--cC
Q 017967 194 -----FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHNPTGIDPTPEQWEKIADVIQE--KN 262 (363)
Q Consensus 194 -----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~----p~NPTG~~~s~~~~~~i~~~~~~--~~ 262 (363)
++..|++++.++.+ +++.+|++.++++++ ++++++++++ |+||||.+ .++++|+++|++ +|
T Consensus 124 ~~~~~l~~~G~~~~~v~~~--~~g~~d~e~l~~ai~---~~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~~~~~ 195 (409)
T 3jzl_A 124 QGQGSLKDFHIGYSSVPLL--ENGDVDFPRIAKKMT---PKTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKNINPE 195 (409)
T ss_dssp SSSSCTGGGTCEEEECCCC--TTSCCCHHHHHHHCC---TTEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHHHCTT
T ss_pred chhhHHHHcCCEEEEeCCC--CCCCcCHHHHHHhcc---CCCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHhhCCC
Confidence 45779999999884 357899999999886 3577888888 99999864 788999999999 99
Q ss_pred CeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHH
Q 017967 263 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKS 331 (363)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~ 331 (363)
+++++|++|..+.+... .. +. ...++++|+||.+|..| .+.||+ ++ +++.++++..
T Consensus 196 ~~livD~a~~~~~~~~~---p~------~~-g~Div~~S~sK~lgg~~~~~GG~v--~~-~~~li~~l~~ 252 (409)
T 3jzl_A 196 VIVFVDNCYGEFVEYQE---PP------EV-GADIIAGSLIKNPGGGLAKTGGYI--AG-KEALVDLCGY 252 (409)
T ss_dssp CEEEEECTTCTTTSSCC---SG------GG-TCSEEEEETTSGGGTTTCSSCEEE--EE-CHHHHHHHHH
T ss_pred CEEEEeCCcccccccCC---cc------cc-CCeEEEECccccCCccCCceEEEE--Ee-CHHHHHHHHH
Confidence 99999999998774311 11 11 23588999999998655 345888 55 4775444443
No 166
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.81 E-value=7.6e-19 Score=169.37 Aligned_cols=193 Identities=18% Similarity=0.164 Sum_probs=140.2
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-----hCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-----DAR 198 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~G 198 (363)
......+|++.++++... +++++ +.+|++|++++ +.++.+||+|+++.|+|......+. ..|
T Consensus 65 ~~p~~~~l~~~la~l~g~--------~~~~~--~~sG~~Ai~~~---~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 131 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEGG--------TRAFA--FASGMAATSTV---MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAG 131 (400)
T ss_dssp CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH---HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCC--------CCEEE--ecCHHHHHHHH---HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcC
Confidence 455678899999998632 34555 67889998764 4567799999999999986655543 459
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCC
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~ 278 (363)
++++.++.. |++.++++++ ++++++++++|+||||.+++ +++|.++|+++|+++|+||+|....+..
T Consensus 132 ~~~~~v~~~-------d~~~l~~~i~---~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~ 198 (400)
T 3nmy_A 132 LDFSFVDLT-------DPAAFKAAIR---ADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR 198 (400)
T ss_dssp CEEEEECTT-------SHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC
T ss_pred eEEEEECCC-------CHHHHHHHhc---cCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 999988762 7899999886 35778888999999999996 7778888999999999999987433221
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ .+. ...+++.|+||.++.+|.++|++.+++.+++. .+.+.........+.+++.+.++...++
T Consensus 199 ------~----~~~-g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~----~~~l~~~~~~~g~~~~~~~a~~~l~~l~ 262 (400)
T 3nmy_A 199 ------P----LSL-GADLVVHSATKYLNGHSDMVGGIAVVGDNAEL----AEQMAFLQNSIGGVQGPFDSFLALRGLK 262 (400)
T ss_dssp ------G----GGG-TCSEEEEETTTTTTCSSSCCCEEEEECSCHHH----HHHHHHHHHHHCCBCCHHHHHHHHHHHT
T ss_pred ------h----hhc-CCcEEEecCccccCCCCCcceeEEEEeCCHHH----HHHHHHHHHhcCCCCCHHHHHHHHHhHh
Confidence 1 111 35588999999999888999871125666774 4444444344445667777766655443
No 167
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.81 E-value=1.4e-18 Score=168.97 Aligned_cols=239 Identities=16% Similarity=0.084 Sum_probs=155.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-++ ..+.+.+++.+.+.......| +.....++++.+++++. ..++|++ ++||++|
T Consensus 57 ~~lD~~~~~~~~~lG~--~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~--~~sgseA 124 (434)
T 2epj_A 57 RIVDLVLAYGPLILGH--KHPRVLEAVEEALARGWLYGA-PGEAEVLLAEKILGYVK-------RGGMIRF--VNSGTEA 124 (434)
T ss_dssp EEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHHC-------TTCEEEE--ESSHHHH
T ss_pred EEEEcccchhcccCCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHHHH
Confidence 6899988864222232 467777777776644322334 33445677777777752 2578888 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh--------------hCCC------CeEEEecccCCCCCCCHHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFN--------------DARV------PWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~--------------~~G~------~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
++++..+...+.+++.|++.+|+|.++...+. ..|+ +++.++. .|++.+++.+
T Consensus 125 ~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l 197 (434)
T 2epj_A 125 TMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVF 197 (434)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHH
Confidence 99885543334567889999999987543221 1243 3455553 3799999998
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcC
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 302 (363)
++.+++++++++...+||||.++ +.+.+++|.++|+++|+++|+||+|.+|..+. ..... ......++ .||
T Consensus 198 ~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~----~~~~~-~~~~~~di---~s~ 269 (434)
T 2epj_A 198 AEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGL----EGAQG-YFNIEGDI---IVL 269 (434)
T ss_dssp HHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSST----THHHH-HHTCCCSE---EEE
T ss_pred HhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCc----chhhH-HhCCCCCe---eee
Confidence 74222344555443456799866 79999999999999999999999999884321 12222 22222333 489
Q ss_pred ccccccccccceEEEEeeCChhHHHHHHHHHHhhh---ccccCCCchHHHHHHhcccc
Q 017967 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA---RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 303 SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~---~~~~~~~s~~~q~~~~~~l~ 357 (363)
||.++. |+|+||+ +++ ++ +++.+.... ....++.+++++.++...|+
T Consensus 270 sK~l~~-G~~~G~v--~~~-~~----~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~ 319 (434)
T 2epj_A 270 GKIIGG-GFPVGAV--AGS-RE----VMSLLTPQGKVFNAGTFNAHPITMAAGLATLK 319 (434)
T ss_dssp EGGGGT-TSSCEEE--EEC-HH----HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred cchhcC-Ccceeee--eec-HH----HHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 999995 9999999 776 55 444444311 12234677788877765554
No 168
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.80 E-value=2.2e-18 Score=168.30 Aligned_cols=249 Identities=12% Similarity=0.090 Sum_probs=153.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCC-cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
.++|+..|.....-++ ..+.+.+++.+.+.... +... .+..++++++++.+....+ ..+++|++ |+||++
T Consensus 51 ~~lD~~~~~~~~~lG~--~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~ggse 121 (449)
T 3a8u_X 51 KVYDSLSGLWTCGAGH--TRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFF--TDSGSE 121 (449)
T ss_dssp EEEETTHHHHTCTTCB--SCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEE--ESSHHH
T ss_pred EEEECCccHhhccCCC--CCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--cCcHHH
Confidence 5788877763222232 26778888777664311 1111 2233444555555444332 24678988 999999
Q ss_pred HHHHHHHHHHHhC------CCCEEEEcCCCCcchHH-HHhhCCC------------CeEEEeccc--CCC-CCCC-----
Q 017967 163 SLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYD--PKT-VGLD----- 215 (363)
Q Consensus 163 al~l~~~l~~~~~------~gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~--~~~-~~~d----- 215 (363)
|++++..++..+. +||+|++.+|+|.++.. .+...|. .+..++... ... .++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 9999855443221 67999999999987643 4444331 234444311 001 1356
Q ss_pred ---HHHHHHHHHcCC-CCcEEEEEcCCC-CCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 216 ---FEGMIADIKAAP-GGSFILLHGCAH-NPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 216 ---~~~l~~~l~~~~-~~~~~~~i~~p~-NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
++.|++.+++.. +++++++ ++|+ ||||. ..+.+++++|.++|+++|+++|+||+|.+|...+. ...+..+
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~---~~~~~~~ 277 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVF-VEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS---MFGADSF 277 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEE-EcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc---chhhhhc
Confidence 999999987422 2344444 5654 67997 66799999999999999999999999988864321 1122222
Q ss_pred HhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhh---------ccccCCCchHHHHHHhcccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLA---------RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~---------~~~~~~~s~~~q~~~~~~l~ 357 (363)
....+++ ||||.++ .| +|+||+ +++ ++ +++.+.... .....+.+.++|.++...|+
T Consensus 278 -~~~~di~---s~sK~l~-~G~~~~G~~--~~~-~~----~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~ 343 (449)
T 3a8u_X 278 -GVTPDLM---CIAKQVT-NGAIPMGAV--IAS-TE----IYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALC 343 (449)
T ss_dssp -TCCCSEE---EECGGGG-TTSSCCEEE--EEE-HH----HHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHH
T ss_pred -CCCCCEE---EEccccc-CCCCceEEE--EEC-HH----HHHHhhccCcccccccccccCCCcccHHHHHHHHHHHH
Confidence 3233433 8999998 58 999999 665 56 555555431 12234667888877766554
No 169
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.80 E-value=1e-18 Score=171.40 Aligned_cols=252 Identities=15% Similarity=0.116 Sum_probs=157.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|.+....|+ ..+.+.+++.+.+.... ..|....+..++++++++++....+ ...++|++ |+||++|
T Consensus 52 ~~lD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~gGseA 124 (460)
T 3gju_A 52 KSIDAFAGLYCVNVGY--GRQKIADAIATQAKNLA-YYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYF--GLSGSDA 124 (460)
T ss_dssp EEEETTHHHHTCTTCB--CCHHHHHHHHHHHHHHS-CCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEE--ESSHHHH
T ss_pred EEEECCcchhhccCCC--CCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHhhCC--CCcCEEEE--eCchHHH
Confidence 6899998854323333 24666666655543211 2233333444555555555544322 23578888 9999999
Q ss_pred HHHHHHHHHHh------CCCCEEEEcCCCCcchHHHHhhC-------------CCCeEEEecc---cCCCCCCC------
Q 017967 164 LRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDA-------------RVPWSEYRYY---DPKTVGLD------ 215 (363)
Q Consensus 164 l~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~---~~~~~~~d------ 215 (363)
++.+..++... .+++.|++.+|+|.++....... +..+..++.. ..++++.+
T Consensus 125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 204 (460)
T 3gju_A 125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ 204 (460)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence 99986554332 24689999999998776544322 1134444421 11223344
Q ss_pred --HHHHHHHHHcC-CCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh
Q 017967 216 --FEGMIADIKAA-PGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (363)
Q Consensus 216 --~~~l~~~l~~~-~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (363)
++.|++++.+. +++++++++..++|++|. +++.+.+++|.++|++||+++|+||+|.+|...+. ...... .+
T Consensus 205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~---~~~~~~-~~ 280 (460)
T 3gju_A 205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT---MFGSDH-YG 280 (460)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SCHHHH-HT
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc---cchHhh-cC
Confidence 58888888642 234556665556667776 77888899999999999999999999999865421 222222 23
Q ss_pred cCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHh-------hhccccCCCchHHHHHHhcccc
Q 017967 292 RGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-------LARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~-------~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
..+++ .+|||.++ .| +|+||+ +++ ++ +++.+.. ......++.++++|.++...|+
T Consensus 281 ~~pdi---~t~sK~l~-gG~~~lg~v--~~~-~~----i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 343 (460)
T 3gju_A 281 IKPDL---ITIAKGLT-SAYAPLSGV--IVA-DR----VWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLE 343 (460)
T ss_dssp CCCSE---EEECGGGT-TTSSCCEEE--EEE-HH----HHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred CCCCe---eeeehhhc-CCCCCeEEE--EEC-HH----HHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 33333 36899997 56 899999 665 66 4444432 2334455788888988877765
No 170
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.80 E-value=1.9e-19 Score=170.22 Aligned_cols=178 Identities=15% Similarity=0.013 Sum_probs=122.5
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCC--EEEEcCCCCcchHH---HH
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISSPTWGNHKN---IF 194 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd--~Vlv~~P~y~~~~~---~~ 194 (363)
..|++..+..+|++++++++.. +.. ++ +.+|++++.++ +.....+|| .|+++.++|..... ..
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~~-------~~~-i~--~~~G~~a~~~a--l~~~~~~gd~~~vi~~~~~~~~~~~~~~~~ 108 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLGM-------DDA-VF--FPSGTMAQQVA--LRIWSDETDNRTVAYHPLCHLEIHEQDGLK 108 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHTC-------SEE-EE--ESCHHHHHHHH--HHHHHHHHTCCEEEECTTCHHHHSSTTHHH
T ss_pred ccccCChHHHHHHHHHHHHhCC-------CcE-EE--ecCcHHHHHHH--HHHHhhcCCCcEEEecccceeeeeccchhh
Confidence 5687778899999999999743 223 33 57788888776 344456777 67766665443322 34
Q ss_pred hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC-CCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 195 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 195 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
...|++++.++. +++.+|++.++++ ++ ++++++++||||| |.+++.+++++|+++|+++|+++|+|++|..
T Consensus 109 ~~~g~~~~~v~~---~~~~~d~~~l~~~----~~-~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 180 (357)
T 3lws_A 109 ELHPIETILVGA---ADRLMTLDEIKAL----PD-IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLF 180 (357)
T ss_dssp HHSSCEEEECSC---TTSCCCHHHHHTC----CS-CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHH
T ss_pred hccCcEEEEecC---CCCCcCHHHHhcC----cC-cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhh
Confidence 556888888874 3467999999875 23 5678889999998 9999999999999999999999999999862
Q ss_pred C--cCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHH
Q 017967 274 F--ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 274 ~--~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
. .+.+ . +...+....+ +++.||||.|+.++. ||+ ++ +++.++++
T Consensus 181 ~~~~~~~--~---~~~~~~~~~d--~~~~s~sK~~~~~~g--g~~--~~-~~~~~~~~ 226 (357)
T 3lws_A 181 EMLPYYE--K---TAAEIAGLFD--SIYISFYKGLGGIAG--AIL--AG-PAAFCQTA 226 (357)
T ss_dssp HHHHHHT--C---CHHHHHTTSS--EEEEESSSTTCCSSC--EEE--EE-CHHHHHHH
T ss_pred hhhhhcC--C---ChHHHHhcCC--EEEEeccccCCCCce--EEE--Ec-CHHHHHHH
Confidence 1 1111 1 1222222223 337899999943332 888 55 47743333
No 171
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.80 E-value=5.3e-19 Score=171.98 Aligned_cols=179 Identities=20% Similarity=0.196 Sum_probs=131.7
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcC-CCCcchHHHH---------
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS-PTWGNHKNIF--------- 194 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~~--------- 194 (363)
..+..++++.+++++... ....++++ .+|++|+.++ +..++.|||+|+++. |.|..+...+
T Consensus 64 ~~~~~~l~~~la~~~g~~----~~~~~i~~---~sGt~Ai~~a--l~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~ 134 (431)
T 3ht4_A 64 DIGRDTLEKVYADVFGAE----AGLVRPQI---ISGTHAISTA--LFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGS 134 (431)
T ss_dssp CHHHHHHHHHHHHHTTCS----EECCBTTS---CSHHHHHHHH--HHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSC
T ss_pred hhhHHHHHHHHHHHhCCC----ccccccee---eCHHHHHHHH--HHHhCCCCCEEEEeCCCCchhHHHHHhhcccccch
Confidence 345667777777775322 11223323 4789998887 555678999999998 9999988655
Q ss_pred -hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEc-CCCCCCCCCCCHHHHHHHHHHHHh--cCCeEEEecC
Q 017967 195 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG-CAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVA 270 (363)
Q Consensus 195 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~-~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~De~ 270 (363)
+..|++++.++.+ .++.+|++.+++++++ ++++++++ +||||||.+++.+++++|+++|++ +|+++|+||+
T Consensus 135 ~~~~G~~~~~v~~~--~~~~~d~e~l~~~l~~---~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea 209 (431)
T 3ht4_A 135 FKEYNIGYNAVPLT--EGGLVDFEAVAAAIHS---NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNC 209 (431)
T ss_dssp SGGGTCEEEECCBC--TTSSBCHHHHHHHCCT---TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred HHHcCCEEEEeCCC--CCCCcCHHHHHhhcCC---CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 4579999999984 3578999999999873 45666666 699999999999999999999999 9999999999
Q ss_pred CCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccc-ccccceEEEEeeCChhHHHHHH
Q 017967 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l-~G~RvG~i~~v~~~~~~~~~~~ 330 (363)
|..+.+... .. .. ...++++||||.+|. .+...||+ +++ ++.++++.
T Consensus 210 ~~~~~~~~~---~~------~~-g~Di~~~S~sK~lgg~~~~~GG~v--~~~-~~li~~l~ 257 (431)
T 3ht4_A 210 YGEFIEEQE---PC------HV-GADLMAGSLIKNPGGGIVKTGGYI--VGK-EQYVEACA 257 (431)
T ss_dssp TCTTSSSCC---GG------GT-TCSEEEEETTSGGGTTTCSSCEEE--EEC-HHHHHHHH
T ss_pred ChhhccCCC---cc------cc-CCeEEEcCccccCCCCCCCceEEE--Eec-HHHHHHHH
Confidence 999886421 11 11 234889999999763 12344998 664 77444443
No 172
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.80 E-value=5.8e-19 Score=166.48 Aligned_cols=192 Identities=10% Similarity=-0.020 Sum_probs=127.2
Q ss_pred ccccHHHHHHHHHHHccCCCCCCC-CCcc----hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh
Q 017967 100 PYVLDVVKKAENLMLERGENKEYL-PIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 174 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~-~~~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~ 174 (363)
..+++.+.+++.+...... .+|. ...+ ..++++.+++++ +.. ++++|++ |.||++++.++ +..+.
T Consensus 13 ~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~v~~--~~g~t~al~~~--~~~l~ 82 (362)
T 3ffr_A 13 SELYPTVRQHMITALDEKI-GVISHRSKKFEEVYKTASDNLKTLL----ELP-SNYEVLF--LASATEIWERI--IQNCV 82 (362)
T ss_dssp CCCCTTHHHHHHHHHHTTT-TTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTEEEEE--ESCHHHHHHHH--HHHHC
T ss_pred cCCCHHHHHHHHHHhcCCc-cCcCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEE--eCCchHHHHHH--HHhcc
Confidence 3345566655554443322 1111 1223 344555555553 222 3567877 99999999988 44445
Q ss_pred CCCCEEEEcCCCCcc-hHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHH
Q 017967 175 FPGAKVLISSPTWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (363)
Q Consensus 175 ~~gd~Vlv~~P~y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~ 253 (363)
.+ +.+++..+.|.. +...++..|++++.++.+ .++.+|++.++ ++ ++++++++++||||||.+++ +++
T Consensus 83 ~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~---~~~~~v~~~~~~nptG~~~~---l~~ 151 (362)
T 3ffr_A 83 EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VP---ADAEIICLTHNETSSGVSMP---VED 151 (362)
T ss_dssp SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CC---TTCCEEEEESEETTTTEECC---HHH
T ss_pred CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--cc---CCccEEEEEcCCCCcceeCC---HHH
Confidence 56 556666667762 345677889999999983 45789999998 32 45678888999999999998 555
Q ss_pred HHHHHHhc-CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhHHHHH
Q 017967 254 IADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 254 i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
|.++|+++ |+++|+|++|....... + .....+++.|+||.++ .+|+ |++ +.+ ++.++++
T Consensus 152 i~~la~~~p~~~li~D~a~~~~~~~~---~---------~~~~d~~~~s~~K~~~~~~G~--g~~--~~~-~~~~~~~ 212 (362)
T 3ffr_A 152 INTFRDKNKDALIFVDAVSSLPYPKF---D---------WTKIDSVFFSVQKCFGLPAGL--GVW--ILN-DRVIEKS 212 (362)
T ss_dssp HTTSGGGSTTSEEEEECTTTTTSSCC---C---------TTSCSEEEEETTSTTCCCSCC--EEE--EEE-HHHHHHH
T ss_pred HHHHHHhCCCCEEEEecccccCCccc---C---------hhHCcEEEEecccccCCCCce--EEE--EEC-HHHHHHh
Confidence 77779999 99999999987654321 0 0113478899999998 7784 666 554 5644433
No 173
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.80 E-value=2e-18 Score=167.20 Aligned_cols=168 Identities=13% Similarity=0.089 Sum_probs=127.5
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (363)
......++++.+|+++.. +++++ +.||++|+.++ +..++.+||+|+++.|.|.+....+ +..|+
T Consensus 80 ~~p~~~~le~~lA~l~g~--------~~~i~--~ssGt~Ai~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~ 147 (415)
T 2fq6_A 80 GTLTHFSLQQAMCELEGG--------AGCVL--FPCGAAAVANS--ILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGV 147 (415)
T ss_dssp CCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH--HHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred CCchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 445678899999999633 34555 78999998887 4555679999999999998877654 46799
Q ss_pred CeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh--cCCeEEEecCCCCCcCC
Q 017967 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASG 277 (363)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~De~y~~~~~~ 277 (363)
++..++. .|+++++++++ ++++++++++|+||||.+++ +++|+++|++ +|+++|+|++|......
T Consensus 148 ~v~~v~~-------~d~~~le~ai~---~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~ 214 (415)
T 2fq6_A 148 TTSWFDP-------LIGADIVKHLQ---PNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF 214 (415)
T ss_dssp EEEEECT-------TCGGGGGGGCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS
T ss_pred EEEEECC-------CCHHHHHHhhc---cCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC
Confidence 9988875 27889988886 35778888999999999996 5677788999 99999999999865432
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCcccccccccc-ceEEEEeeCChhHHHHHH
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~R-vG~i~~v~~~~~~~~~~~ 330 (363)
. ++ +. ...+++.|++|.+|.+|.+ +||+ ++. ++.++++.
T Consensus 215 ~------p~----~~-g~Div~~S~sK~lg~~g~~~~G~l--~~~-~~~~~~l~ 254 (415)
T 2fq6_A 215 K------AL----DF-GIDVSIQAATKYLVGHSDAMIGTA--VCN-ARCWEQLR 254 (415)
T ss_dssp C------GG----GG-TCSEEEEETTTTTTCSSSCCCEEE--EEC-TTTHHHHH
T ss_pred C------cc----cc-CCeEEEEeCccccCCCCCceEEEE--EeC-HHHHHHHH
Confidence 1 11 11 3458899999999988876 5888 555 45444443
No 174
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.79 E-value=1.6e-18 Score=168.32 Aligned_cols=238 Identities=15% Similarity=0.081 Sum_probs=151.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|......|+ ..+.+.+++.+.+.......| +.....+|.+.+++++. ..+++++ ++||++|
T Consensus 54 ~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-------~~~~v~~--~~sGsea 121 (429)
T 4e77_A 54 AYIDYVGSWGPMILGH--NHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLVP-------TMDMVRM--VNSGTEA 121 (429)
T ss_dssp EEEESSGGGTTCTTCB--TCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST-------TCSEEEE--ESSHHHH
T ss_pred EEEECCCchhccccCC--CCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhCC-------CCCEEEE--eCcHHHH
Confidence 7899998875433333 367788887776654332334 55566677777777742 2578988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCC-------------C------CeEEEecccCCCCCCCHHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR-------------V------PWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G-------------~------~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
++++..+...+..++.|++..++|.++...+. ..| + .+..++. .|++.+++.+
T Consensus 122 ~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l 194 (429)
T 4e77_A 122 TMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAF 194 (429)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHH
Confidence 99986544344466899999999977754211 111 1 1122221 2899999999
Q ss_pred HcCCCCcEEEEEcCCCCCCCCCCC--HHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 224 KAAPGGSFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NPTG~~~s--~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
++.++++ .+++++|+||+|.++. .+.+++|.++|+++|+++|+||+|.+|..+. ...... .....++ .|
T Consensus 195 ~~~~~~~-~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~----~~~~~~-~~~~pdi---~t 265 (429)
T 4e77_A 195 EQYPQEV-ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVAL----AGAQDY-YHVIPDL---TC 265 (429)
T ss_dssp HHSTTTE-EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBT----TCHHHH-TTCCCSE---EE
T ss_pred HhcCCCE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCc----chHHHh-cCCCCCe---ee
Confidence 8644434 4445788877764444 4559999999999999999999999883221 112221 2222333 48
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhh---ccccCCCchHHHHHHhcccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA---RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~---~~~~~~~s~~~q~~~~~~l~ 357 (363)
|||.++ +|+|+||+ +++ ++ +++.+.... ....++.+++++.++...|+
T Consensus 266 ~sK~~~-~G~~~G~~--~~~-~~----~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~ 316 (429)
T 4e77_A 266 LGKIIG-GGMPVGAF--GGR-RE----VMNALAPTGPVYQAGTLSGNPIAMAAGFACLT 316 (429)
T ss_dssp EEGGGG-TTSCCEEE--EEC-HH----HHTTBTTTSSBCC--CCCCCHHHHHHHHHHHH
T ss_pred eccccc-CCCCeEEE--EEC-HH----HHHHhccCCCccccCCCCCCHHHHHHHHHHHH
Confidence 999999 89999999 664 66 555444321 22334678888887766654
No 175
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.79 E-value=2.6e-18 Score=166.56 Aligned_cols=237 Identities=16% Similarity=0.055 Sum_probs=151.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+|||..|.....-++ ..+.+.+++.+.++......| +..-..++++.+++++ + .+++|++ ++||++|
T Consensus 53 ~~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~----~---~~~~v~~--~~~g~ea 120 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGH--AHPKVLARVRETLERGLTFGA-PSPLEVALAKKVKRAY----P---FVDLVRF--VNSGTEA 120 (424)
T ss_dssp EEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHC----T---TCCEEEE--ESSHHHH
T ss_pred EEEEccccccccccCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhC----C---CCCEEEE--eCCHHHH
Confidence 6889988864222232 467777777776644322233 2233455666666552 1 3578888 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-h-------------CCC------CeEEEecccCCCCCCCHHHHHHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D-------------ARV------PWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~-------------~G~------~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
++++..+...+..++.|++.+|+|.++...+. . .|+ +++.++. .|++.|++.+
T Consensus 121 ~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l 193 (424)
T 2e7u_A 121 TMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVL 193 (424)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHH
Confidence 99885542234456889999999987654221 1 232 2444443 3799999988
Q ss_pred HcCCCCcEEEEEcCCCCC-CCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 224 KAAPGGSFILLHGCAHNP-TGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 224 ~~~~~~~~~~~i~~p~NP-TG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
++.++++ .+++++|+|| ||.++ +.+.+++|.++ ++||+++|+||+|.+|..+. .... .......++ .|
T Consensus 194 ~~~~~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~----~~~~-~~~~~~~di---~s 263 (424)
T 2e7u_A 194 KRRGEEI-AAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAF----GGAT-ELLGLKPDL---VT 263 (424)
T ss_dssp HHHGGGE-EEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSST----THHH-HHHTCCCSE---EE
T ss_pred HhCCCCE-EEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccch----hHHH-HHhCCCcch---hh
Confidence 7422233 4445677776 89765 79999999999 99999999999999984331 1222 222323343 39
Q ss_pred CccccccccccceEEEEeeCChhHHHHHHHHHHhhh---ccccCCCchHHHHHHhcccc
Q 017967 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA---RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~---~~~~~~~s~~~q~~~~~~l~ 357 (363)
|||.++ +|+|+||+ +++ ++ +++.+.... ....++.++++|.++...|+
T Consensus 264 ~sK~l~-~G~~~G~~--~~~-~~----~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 314 (424)
T 2e7u_A 264 LGKILG-GGLPAAAY--AGR-RE----IMEKVAPLGPVYQAGTLSGNPLAMAAGLATLE 314 (424)
T ss_dssp ECGGGG-TTSSCEEE--EEC-HH----HHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHH
T ss_pred hhhhhh-CCcceEEE--EEc-HH----HHhhhcccCCcccCCCCCCCHHHHHHHHHHHH
Confidence 999999 69999999 776 55 455444311 12234677888887766554
No 176
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.79 E-value=1.2e-18 Score=165.77 Aligned_cols=188 Identities=16% Similarity=0.027 Sum_probs=140.4
Q ss_pred cccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCE
Q 017967 101 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK 179 (363)
Q Consensus 101 ~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~ 179 (363)
.+.+.+.+++.+.+... .|.+..+..++|+++++++.. +++++ +.||++|++++ +..+ +.+||+
T Consensus 14 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~sgt~al~~~--l~~l~~~~gd~ 78 (373)
T 3frk_A 14 EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCNV--------NYCIG--CGNGLDALHLI--LKGYDIGFGDE 78 (373)
T ss_dssp HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHHHH--HHHTTCCTTCE
T ss_pred CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHcCCCCcCE
Confidence 34567777777666442 367788999999999999743 36766 89999999888 4444 569999
Q ss_pred EEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Q 017967 180 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (363)
Q Consensus 180 Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~ 259 (363)
|+++.|+|..+...++..|++++.++.+ ++++.+|++.+++++++ ++++++ |+||||...+ +++|.++|+
T Consensus 79 Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~l~~---~~~~v~---~~n~~G~~~~---l~~i~~l~~ 148 (373)
T 3frk_A 79 VIVPSNTFIATALAVSYTGAKPIFVEPD-IRTYNIDPSLIESAITE---KTKAII---AVHLYGQPAD---MDEIKRIAK 148 (373)
T ss_dssp EEEETTSCTHHHHHHHHHSCEEEEECEE-TTTTEECGGGTGGGCCT---TEEEEE---EECCTTCCCC---HHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecc-ccccCcCHHHHHHhcCC---CCeEEE---EECCCcCccc---HHHHHHHHH
Confidence 9999999999999999999999999985 34688999999988863 455555 6889999876 456777799
Q ss_pred hcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc--cccccccccceEEEEeeCChhH
Q 017967 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 260 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S--K~~~l~G~RvG~i~~v~~~~~~ 325 (363)
++|+++|+|++|.....-+. ... ... ..+++.||| |.++.+|. .|++ ++.+++.
T Consensus 149 ~~~~~li~D~a~~~g~~~~~--~~~------~~~-~d~~~~S~~~~K~l~~~g~-gg~~--~~~~~~~ 204 (373)
T 3frk_A 149 KYNLKLIEDAAQAHGSLYKG--MKV------GSL-GDAAGFSFYPAKNLGSLGD-GGAV--VTNDKDL 204 (373)
T ss_dssp HHTCEEEEECTTCTTCEETT--EET------TSS-SSEEEEECCTTSSSCCSSS-CEEE--EESCHHH
T ss_pred HcCCEEEEECCcccCCEECC--Eec------ccc-ccEEEEeCcCCCccCccce-eEEE--EeCCHHH
Confidence 99999999999875432111 000 100 137788877 88873354 7888 7777763
No 177
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.79 E-value=3.3e-19 Score=174.58 Aligned_cols=252 Identities=12% Similarity=0.010 Sum_probs=156.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.+...-|+ -.+.+.+++.+.+... ..|....+..+.+.++++++....+. ...++|++ |+||++|
T Consensus 62 ~ylD~~~~~~~~~lGh--~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~--~~sGseA 134 (451)
T 3oks_A 62 RLIDLGSGIAVTTVGN--SAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSAL--FNSGSEA 134 (451)
T ss_dssp EEEESSHHHHTCTTCT--TCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEE--ESSHHHH
T ss_pred EEEEcCCCccccccCC--CCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEE--eCcHHHH
Confidence 6899998854333333 2567777777666432 23443344445555555555443221 12468888 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCC--------------CCeEEEeccc--------CCCCCC---CHHH
Q 017967 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR--------------VPWSEYRYYD--------PKTVGL---DFEG 218 (363)
Q Consensus 164 l~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G--------------~~~~~v~~~~--------~~~~~~---d~~~ 218 (363)
++++..+......+++|++..++|.++.......+ ..+..++... .+..+. +++.
T Consensus 135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence 99985544332345899999999987765443221 1345555420 000111 2444
Q ss_pred HHHHHHcC-CCCcEEEEEcCCCCCCC--CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCe
Q 017967 219 MIADIKAA-PGGSFILLHGCAHNPTG--IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (363)
Q Consensus 219 l~~~l~~~-~~~~~~~~i~~p~NPTG--~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 295 (363)
+++.+.+. ....+..++++|.|++| ...+.+.+++|.++|++||+++|+||+|.+|...+. ...... .....+
T Consensus 215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~-~~~~pd 290 (451)
T 3oks_A 215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA---MFACEH-EGIDPD 290 (451)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGGG-GTCCCS
T ss_pred HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc---chhhhh-cCCCCC
Confidence 55555431 11344555678888776 344677799999999999999999999998865431 111111 122233
Q ss_pred EEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 296 vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
++ +|||.++ .|+|+||+ +++ ++ +++.+........++.++++|.++...|+
T Consensus 291 i~---t~sK~l~-~G~~iG~v--~~~-~~----~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 341 (451)
T 3oks_A 291 LI---VTAKGIA-GGLPLSAV--TGR-AE----IMDSPHVSGLGGTYGGNPIACAAALATIE 341 (451)
T ss_dssp EE---EECGGGG-TTSSCEEE--EEE-HH----HHTCSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred ee---eehhhhh-CCcceEEE--EEC-HH----HHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 33 8999998 59999999 665 66 55555544455566888999988877665
No 178
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.79 E-value=1.1e-17 Score=162.14 Aligned_cols=182 Identities=17% Similarity=0.191 Sum_probs=135.1
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcC-CCCcchHHH-----
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS-PTWGNHKNI----- 193 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~----- 193 (363)
+.| +..|..+|++.+|+++... ..++..++.+|++|+.++ +..++.|||+|++++ |.|..+...
T Consensus 68 y~y-~~~~~~~Le~~lA~l~g~e-------~alv~p~~~sGt~Ai~~a--l~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 137 (427)
T 3i16_A 68 YGY-GDIGRDSLDAVYARVFNTE-------SALVRPHFVNGTHALGAA--LFGNLRPGNTMLSVCGEPYDTLHDVIGITE 137 (427)
T ss_dssp TCT-TCHHHHHHHHHHHHHHTCS-------EEEEETTCCSHHHHHHHH--HHHHCCTTCEEEESSSSCCGGGHHHHTCSC
T ss_pred CCC-CHHHHHHHHHHHHHHhCCc-------ceEEeCCCccHHHHHHHH--HHHHhCCCCEEEEeCCCccHHHHHHHhccc
Confidence 445 4557899999999996432 223211168899998777 566688999999999 999988744
Q ss_pred ------HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC----CCCCCCCCCCHHHHHHHHHHHHh--c
Q 017967 194 ------FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHNPTGIDPTPEQWEKIADVIQE--K 261 (363)
Q Consensus 194 ------~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~----p~NPTG~~~s~~~~~~i~~~~~~--~ 261 (363)
++..|++++.++.+ .++.+|++.+++++++. ++++++++++ |+||||. ..++++|+++|++ +
T Consensus 138 ~~~~~~l~~~G~~~~~v~~~--~~g~~D~e~l~~~l~~~-~~tklV~i~~s~~~p~nptg~---i~dl~~i~~la~~~~~ 211 (427)
T 3i16_A 138 NSNMGSLKEFGINYKQVDLK--EDGKPNLEEIEKVLKED-ESITLVHIQRSTGYGWRRALL---IEDIKSIVDCVKNIRK 211 (427)
T ss_dssp CCSSCCTGGGTCEEEECCCC--TTSSCCHHHHHHHHHTC-TTEEEEEEECSCCSSSSCCCC---HHHHHHHHHHHHHHCT
T ss_pred cchHHHHHHcCCEEEEecCc--cCCCcCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCCccc---HHHHHHHHHHHHHhCC
Confidence 45679999999874 35679999999999842 2466777788 8888875 5789999999999 9
Q ss_pred CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHH
Q 017967 262 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 262 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~ 330 (363)
|+++|+|++|..+.+... .. +. ...++++|+||.+|..| .+.||+ +++ ++.++++.
T Consensus 212 g~~livD~a~~~~~~~~~---p~------~~-gaDiv~~S~sK~lgg~g~~~gG~i--~~~-~~li~~l~ 268 (427)
T 3i16_A 212 DIICFVDNCYGEFMDTKE---PT------DV-GADLIAGSLIKNIGGGIAPTGGYL--AGT-KDCIEKTS 268 (427)
T ss_dssp TSEEEEECTTTTTSSSSC---GG------GG-TCSEEEEETTSGGGTTTCCSCEEE--EEC-HHHHHHHH
T ss_pred CCEEEEECCCccccccCC---cc------cc-CCeEEEecCcccCCCCCCceEEEE--EEC-HHHHHHHH
Confidence 999999999998874311 11 11 23588999999998555 667888 554 77444443
No 179
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.78 E-value=1.8e-18 Score=168.47 Aligned_cols=237 Identities=14% Similarity=0.134 Sum_probs=149.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.....-+ +..+.+.+++.+.++.... ..| +.....++++.+++++ + .++|++ ++||+
T Consensus 66 ~ylD~~~g~~~~~lg--h~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~sGs 132 (433)
T 1z7d_A 66 RYYDFLSAYSSVNQG--HCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL-G-------YDKVLM--MNTGA 132 (433)
T ss_dssp EEEESSHHHHTTTTC--BTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH-T-------CSEEEE--ESSHH
T ss_pred EEEEcccchhhcccC--CCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc-C-------CCeEEE--eCCHH
Confidence 688998876422222 2456777887776643211 123 3344567888888875 2 368888 99999
Q ss_pred HHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchHH-HHhhCC------------CCeEEEecccCCCCCCCHHHHH
Q 017967 162 GSLRLAAALIERY-------FPG-AKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGMI 220 (363)
Q Consensus 162 ~al~l~~~l~~~~-------~~g-d~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~ 220 (363)
+|++++..+...+ .+| |+|++.+|+|.++.. .+...| ..++.+|. .|++.++
T Consensus 133 eA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le 205 (433)
T 1z7d_A 133 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALE 205 (433)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHH
Confidence 9999986543321 368 999999999987644 233333 23444443 3899999
Q ss_pred HHHHcCCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE
Q 017967 221 ADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (363)
Q Consensus 221 ~~l~~~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 299 (363)
++++. ++++++++...+|+||.. ++.+.+++|.++|+++|+++|+||+|.+|...+. ..... ......+++
T Consensus 206 ~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~---~~~~~-~~~~~~di~-- 277 (433)
T 1z7d_A 206 EELKD--PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK---LLCVH-HYNVKPDVI-- 277 (433)
T ss_dssp HHHTS--TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGG-GGTCCCSEE--
T ss_pred HHhCC--CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc---chhhH-hcCCCCCEE--
Confidence 99852 345555544446778975 7889999999999999999999999988754321 11111 112223433
Q ss_pred EcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 300 QSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 300 ~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
||||.+| +| +|+||+ +++ ++ +++.+........++.+++++.++...|+
T Consensus 278 -t~sK~l~-~G~~~~G~v--~~~-~~----~~~~l~~~~~~~t~~~~~~~~aaa~aal~ 327 (433)
T 1z7d_A 278 -LLGKALS-GGHYPISAV--LAN-DD----IMLVIKPGEHGSTYGGNPLAASICVEALN 327 (433)
T ss_dssp -EECGGGG-TTSSCCEEE--EEC-HH----HHTTCCTTCCCCTTTTCHHHHHHHHHHHH
T ss_pred -EECcccc-CCCCCeEEE--EEC-HH----HHhhhccccccccCCCCHHHHHHHHHHHH
Confidence 8999999 89 999999 776 55 44444433233445677888877766554
No 180
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.78 E-value=9.3e-19 Score=171.07 Aligned_cols=249 Identities=10% Similarity=-0.015 Sum_probs=149.4
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.++|+..|.....-|+ ..+.+.+++.+.+... ..|....+..+.++++++++....+ ...++|++ |+||++|
T Consensus 45 ~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~sGseA 116 (448)
T 3dod_A 45 EYYDGFSSVWLNVHGH--RKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFY--SDSGAEA 116 (448)
T ss_dssp EEEETTHHHHTCSSCB--SCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEE--ESSHHHH
T ss_pred EEEECCcchhhccCCC--CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCchHHH
Confidence 6899988764333343 3577888877766432 2233344445556666666544332 22478888 9999999
Q ss_pred HHHHHHHHHHh--CC----CCEEEEcCCCCcchHHHHhhCCC-------------CeEEEecccCCCCCC----------
Q 017967 164 LRLAAALIERY--FP----GAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGL---------- 214 (363)
Q Consensus 164 l~l~~~l~~~~--~~----gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~---------- 214 (363)
++++..+.... .+ +|+|++.+|+|.++.......+. .+..++. ++.+..
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 194 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECRD 194 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhhH
Confidence 99986554332 04 49999999999877543332221 2333443 122222
Q ss_pred -CHHHHHHHHHcCCCCcEEEEEcCCC-CCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh
Q 017967 215 -DFEGMIADIKAAPGGSFILLHGCAH-NPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (363)
Q Consensus 215 -d~~~l~~~l~~~~~~~~~~~i~~p~-NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (363)
|++.|++.++..+++..++++...+ |++| .+++.+.+++|.++|++||+++|+||+|.+|...+. ...... ..
T Consensus 195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~---~~a~~~-~~ 270 (448)
T 3dod_A 195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGK---MFACEH-EN 270 (448)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGGG-GT
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc---hhhhhh-cC
Confidence 4788999887322344555555555 7777 556788899999999999999999999999865431 111111 12
Q ss_pred cCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHh-------hhccccCCCchHHHHHHhcccc
Q 017967 292 RGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-------LARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~-------~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
...+ +.+|||.++ .| +|+||+ +++ ++ +++.+.. ......++.++++|.++...|+
T Consensus 271 ~~~d---i~t~sK~l~-~G~~~ig~v--~~~-~~----~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 333 (448)
T 3dod_A 271 VQPD---LMAAGKGIT-GGYLPIAVT--FAT-ED----IYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLA 333 (448)
T ss_dssp CCCS---EEEECGGGG-TTSSCCEEE--EEE-HH----HHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred CCCC---EEEeccccc-CCcCceEEE--EEC-HH----HHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHH
Confidence 2233 336899998 59 599999 665 66 5565544 3333455778888888877665
No 181
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.78 E-value=6.9e-18 Score=164.58 Aligned_cols=237 Identities=11% Similarity=0.142 Sum_probs=157.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.++|+..|.....-+ +..+.+.+++.+.++.... ..| +.....++++.+++++ + .+++++ ++||+
T Consensus 77 ~ylD~~sg~~~~~lg--h~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~sGs 143 (439)
T 2oat_A 77 KYFDFLSSYSAVNQG--HCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF-N-------YHKVLP--MNTGV 143 (439)
T ss_dssp EEEESSGGGGTTTTC--BTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH-T-------CSEEEE--ESSHH
T ss_pred EEEEccCCcccccCC--CCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc-C-------CCEEEE--eCCHH
Confidence 688998886432222 2467788887776643211 113 3345678888888886 2 368877 99999
Q ss_pred HHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchH-HHHhhCC------------CCeEEEecccCCCCCCCHHHHH
Q 017967 162 GSLRLAAALIERY-------FPG-AKVLISSPTWGNHK-NIFNDAR------------VPWSEYRYYDPKTVGLDFEGMI 220 (363)
Q Consensus 162 ~al~l~~~l~~~~-------~~g-d~Vlv~~P~y~~~~-~~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~ 220 (363)
+|++++..++..+ .+| |.|++.+|+|.++. ..+...| ..++.+|. .|++.++
T Consensus 144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le 216 (439)
T 2oat_A 144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE 216 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHH
Confidence 9999885544321 367 89999999997764 3444444 35566654 2899999
Q ss_pred HHHHcCCCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE
Q 017967 221 ADIKAAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (363)
Q Consensus 221 ~~l~~~~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 299 (363)
+.++. ++++++++...+|+||. .++.+++++|.++|++||+++|+||+|.+|...+. ..... ......+++
T Consensus 217 ~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~---~~~~~-~~~~~~Di~-- 288 (439)
T 2oat_A 217 RALQD--PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR---WLAVD-YENVRPDIV-- 288 (439)
T ss_dssp HHTTS--TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGG-GGTCCCSEE--
T ss_pred HHhCC--CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc---chhHH-HhCCCCcEE--
Confidence 98852 34555554444567896 57999999999999999999999999988764321 11111 112223433
Q ss_pred EcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 300 QSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 300 ~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
||||.++ +| +|+||+ +++ ++ +++.+........++.+++++.++...|+
T Consensus 289 -t~sK~l~-~G~~~~G~v--~~~-~~----~~~~l~~~~~~~t~~~~~~~~aaa~aal~ 338 (439)
T 2oat_A 289 -LLGKALS-GGLYPVSAV--LCD-DD----IMLTIKPGEHGSTYGGNPLGCRVAIAALE 338 (439)
T ss_dssp -EECGGGG-TTSSCCEEE--EEC-HH----HHTTSCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred -Eeccccc-CCCCCeEEE--EEC-HH----HHhccCCCCcccCCCcCHHHHHHHHHHHH
Confidence 9999999 69 999999 776 55 44444433233445677888887765554
No 182
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.78 E-value=2e-18 Score=169.34 Aligned_cols=249 Identities=14% Similarity=0.095 Sum_probs=158.0
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CC-CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchh
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (363)
.+||+..|.....-|. -.+.+.+++.+.+... .. ..+.+.....+|++.+++++. ...++|++ ++||+
T Consensus 76 ~ylD~~s~~~~~~lGh--~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~------~~~~~v~~--~~sGs 145 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGH--GHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITP------AGLDTVFF--SDSGS 145 (457)
T ss_dssp EEEETTHHHHTCTTCB--TCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSS------TTEEEEEE--ESSHH
T ss_pred EEEECCCcHhhhccCC--CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCC------CCcCEEEE--eCcHH
Confidence 5788887743222332 3566777766555331 10 122234455677777777741 12468888 99999
Q ss_pred HHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchHHHHhhC--------------CCCeEEEecccCCCCCCCHHHHHH
Q 017967 162 GSLRLAAALIERY-----FPG-AKVLISSPTWGNHKNIFNDA--------------RVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 162 ~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~~~~~~--------------G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
+|++++..+.... .+| +.|++.+++|.++....... ...+..++.........|++.|++
T Consensus 146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~ 225 (457)
T 3tfu_A 146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEA 225 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHH
Confidence 9999985544332 145 58999999997765443333 113333443111112247899999
Q ss_pred HHHcCCCCcEEEEEcC-CCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEE
Q 017967 222 DIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (363)
Q Consensus 222 ~l~~~~~~~~~~~i~~-p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 299 (363)
++++.++++.++++.+ ++||+|..+ +.+.+++|.++|+++|+++|+||+|.+|...+. ...... ....++++
T Consensus 226 ~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~---~~a~~~-~~~~pdii-- 299 (457)
T 3tfu_A 226 QLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA---LFAADH-AGVSPDIM-- 299 (457)
T ss_dssp HHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSTHHH-HTCCCSEE--
T ss_pred HHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc---hhHhHh-cCCCceEE--
Confidence 9875334566777677 799999877 778899999999999999999999999865431 122222 23334444
Q ss_pred EcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhh-----hccccCCCchHHHHHHhcccc
Q 017967 300 QSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRL-----ARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 300 ~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~-----~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+|||.++ .| +|+||+ +++ ++ +++.+... .....++.+++++.++...|+
T Consensus 300 -t~sK~l~-gG~~~lG~v--~~~-~~----i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~ 354 (457)
T 3tfu_A 300 -CVGKALT-GGYLSLAAT--LCT-AD----VAHTISAGAAGALMHGPTFMANPLACAVSVASVE 354 (457)
T ss_dssp -EECGGGG-TTSSCCEEE--EEE-HH----HHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred -EEChhhh-CCCcceEEE--EEc-HH----HHHHhhccCCCceeEecCCCcCHHHHHHHHHHHH
Confidence 8999887 46 799999 665 66 55555311 222345778888887766665
No 183
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.78 E-value=2.4e-18 Score=165.81 Aligned_cols=210 Identities=15% Similarity=0.150 Sum_probs=127.2
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCC------CCCcchHHHHH----HHHHHHhcCCCCcccCCcEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNK----VTAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~G~~~lr~----aia~~l~~~~~~~~~~~~i~ 153 (363)
+.|+|..+++ +.++.+.+++.+.+.......| .......++++ .+++++.. ++++|+
T Consensus 26 ~~i~l~~~~~-------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~------~~~~i~ 92 (417)
T 3n0l_A 26 EGLEMIASEN-------FTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNC------KFANVQ 92 (417)
T ss_dssp HSEECCTTCC-------CCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC------SEEECC
T ss_pred cCeeeecccC-------CCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCC------CCcceE
Confidence 5678865442 2367788887665522211222 22233344544 55555422 245665
Q ss_pred EEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---HHhhCCCC--eEEEecccCCCCCCCHHHHHHHHHcCCC
Q 017967 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVP--WSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~--~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (363)
+ +.| +++++++ +..++.+||+|+++.|+|..+.. .+...|.. ++.++. ++++.+|++.|++.+++.
T Consensus 93 ~--~sG-t~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~i~~~-- 163 (417)
T 3n0l_A 93 P--NSG-SQANQGV--YAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGV--ELDGRIDYEKVREIAKKE-- 163 (417)
T ss_dssp C--SSH-HHHHHHH--HHHHSCTTCEEEEECC----------------CCSEEEEECC--CTTSSCCHHHHHHHHHHH--
T ss_pred e--ccH-HHHHHHH--HHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccC--CCCCCcCHHHHHHHHHhc--
Confidence 5 666 8998888 44457899999999999987655 33444444 455555 356779999999999731
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC-CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
+++++++++|+| |..++ +++|.++|+++|+++|+||++ .++.+.+... ..+ . ...+++.||||.+
T Consensus 164 ~~~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~~----~--~~di~~~s~sK~l- 229 (417)
T 3n0l_A 164 KPKLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHP--SPF----P--YAHVVSSTTHKTL- 229 (417)
T ss_dssp CCSEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC--CCT----T--TCSEEEEESSTTT-
T ss_pred CCeEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCC--Ccc----c--cceEEEeeCcccc-
Confidence 344666677776 77777 677888899999999999995 3333221100 000 1 2358899999988
Q ss_pred cccccceEEEEeeCChhHHHHHHHHHHhh
Q 017967 308 LYAERIGAMNVVCSSSDLAARVKSQLKRL 336 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~~~~~~~~l~~~ 336 (363)
+|+|.||+ ++++++ +.+.+...
T Consensus 230 -~g~~~G~~--~~~~~~----~~~~~~~~ 251 (417)
T 3n0l_A 230 -RGPRGGII--MTNDEE----LAKKINSA 251 (417)
T ss_dssp -CSCSCEEE--EESCHH----HHHHHHHH
T ss_pred -CCCCeeEE--EECCHH----HHHHHhhh
Confidence 69999999 887667 44545444
No 184
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.4e-18 Score=171.96 Aligned_cols=190 Identities=13% Similarity=0.072 Sum_probs=143.1
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh---CCC---CEEEEcCCCCcchHHH
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPG---AKVLISSPTWGNHKNI 193 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~---~~g---d~Vlv~~P~y~~~~~~ 193 (363)
.+|....|..++++.+++++....+...+++++++ +.||++|+.++...+... .+| |.|+++.|+|..+...
T Consensus 97 ~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~--~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~ 174 (497)
T 3mc6_A 97 LHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTT--TSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKA 174 (497)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEE--ESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHH
T ss_pred CCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEE--cCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHH
Confidence 45666778889999988888776666555778877 999999999885433221 145 8999999999999999
Q ss_pred HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 194 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
++..|++++.+++++ +++.+|++.|+++++ ++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|.+
T Consensus 175 ~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a~~~ 247 (497)
T 3mc6_A 175 AYYFGMKLRHVELDP-TTYQVDLGKVKKFIN---KNTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSCLGS 247 (497)
T ss_dssp HHHSCCEEEEECBCT-TTCSBCTTTTGGGCC---SSEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETTTTH
T ss_pred HHHcCCeEEEEecCc-ccCcCCHHHHHHHHh---hCCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECcchh
Confidence 999999999999853 368899999999886 35788899999999999977 55677789999999999999985
Q ss_pred CcCC-----CCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 274 FASG-----SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 274 ~~~~-----~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+... +. ...+.+. .....-.+++.|++|.++ .|.++||+ ++.++.
T Consensus 248 ~~~~f~~~~~~-~~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~--~~~~~~ 297 (497)
T 3mc6_A 248 FIVSFMEKAGY-KNLPLLD--FRVPGVTSISCDTHKYGF-APKGSSVI--MYRNSD 297 (497)
T ss_dssp HHHGGGTTTTC-CSCCCCS--TTSTTCCEEEEETTTTTC-CCSSCEEE--ECSSHH
T ss_pred hhhhhhhhhcc-cCCcccc--ccCCCCcEEEECchhhcC-CCCCceeE--EecCHH
Confidence 4211 00 0000000 011123577889999764 78999999 777554
No 185
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.78 E-value=3.3e-19 Score=168.51 Aligned_cols=196 Identities=17% Similarity=0.046 Sum_probs=130.4
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCE--
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-- 179 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~-- 179 (363)
+.+.+.+++.+... ...|++..+..+|++++++++.. +..++ +.||++++.++ +...+.+||.
T Consensus 27 ~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~~g~~a~~~a--~~~~~~~g~~~v 91 (359)
T 3pj0_A 27 VLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILGK--------QSAVF--FPSGTMAQQIA--LRIWADRKENRR 91 (359)
T ss_dssp HHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHHHHHHTCCE
T ss_pred CCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHHhcCCCcE
Confidence 45666666544222 25687888999999999999643 22234 57888898877 3444557776
Q ss_pred EEEcCCCCcchH---HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC-CCCCCHHHHHHHH
Q 017967 180 VLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT-GIDPTPEQWEKIA 255 (363)
Q Consensus 180 Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT-G~~~s~~~~~~i~ 255 (363)
|+++.++|.... ......|++++.++. +++.+|++.++++ . ++++++++++||||| |.+++.+++++|+
T Consensus 92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~l~ 164 (359)
T 3pj0_A 92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEKIS 164 (359)
T ss_dssp EEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHHHH
T ss_pred EEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHHHH
Confidence 555545443221 122456899988876 3578999999887 3 356688889999998 7999999999999
Q ss_pred HHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHH
Q 017967 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (363)
Q Consensus 256 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~ 329 (363)
++|+++|+++|+|++|..+..... ..+...+. ...+ +++.||||.++.++ . ||+ +.+++.++++
T Consensus 165 ~~~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~-~~~d-~~~~s~sK~~~~~~-g-g~~---~~~~~l~~~~ 228 (359)
T 3pj0_A 165 EYCHEQGISLHLDGARLWEITPFY---QKSAEEIC-ALFD-SVYVSFYKGIGGIA-G-AIL---AGNDDFVQEA 228 (359)
T ss_dssp HHHHHHTCEEEEEETTCGGGHHHH---TCCHHHHH-TTCS-EEEEESSSTTCCSS-C-EEE---EECHHHHHHH
T ss_pred HHHHHcCCEEEEECcchhcchhhh---CCCHHHhh-ccCC-EEEEeccccCCCcc-e-EEE---ECCHHHHHHH
Confidence 999999999999999865431100 00122222 2223 34568999987552 2 666 4457743333
No 186
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.78 E-value=5.4e-18 Score=160.84 Aligned_cols=186 Identities=13% Similarity=0.007 Sum_probs=139.0
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH---hCC
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER---YFP 176 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~---~~~ 176 (363)
+.+++.+.+++.+.+... .|.+..+..++++++++++.. +++++ |+||++|+.++ +..+ +.+
T Consensus 9 ~~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~--~~~~~~~~~~ 73 (375)
T 2fnu_A 9 PCLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLGV--------KHALV--FNSATSALLTL--YRNFSEFSAD 73 (375)
T ss_dssp CCCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHSSCCCTT
T ss_pred CCCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHhcccCCC
Confidence 446778888887776432 244567789999999999732 27777 99999999988 4444 569
Q ss_pred CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHH
Q 017967 177 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (363)
Q Consensus 177 gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~ 256 (363)
||+|+++.|+|..+...++..|++++.+++++ ++.+|++.+++.+++ ++++++++++ ||...+ +++|.+
T Consensus 74 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~---~~~~v~~~~~---tG~~~~---l~~i~~ 142 (375)
T 2fnu_A 74 RNEIITTPISFVATANMLLESGYTPVFAGIKN--DGNIDELALEKLINE---RTKAIVSVDY---AGKSVE---VESVQK 142 (375)
T ss_dssp SCEEEECSSSCTHHHHHHHHTTCEEEECCBCT--TSSBCGGGSGGGCCT---TEEEEEEECG---GGCCCC---HHHHHH
T ss_pred CCEEEECCCccHhHHHHHHHCCCEEEEeccCC--CCCCCHHHHHhhcCc---CceEEEEeCC---cCCccC---HHHHHH
Confidence 99999999999999999999999999999843 347899999988762 4566665554 999987 567777
Q ss_pred HHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCc--cccccccccceEEEEee-CChhH
Q 017967 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVC-SSSDL 325 (363)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S--K~~~l~G~RvG~i~~v~-~~~~~ 325 (363)
+|+++|+++|+|++|....... ... ..... .+++.||| |.++. | +|++ ++ ++++.
T Consensus 143 l~~~~~~~li~D~a~~~~~~~~----~~~----~~~~~-~i~~~s~s~~K~~~~-g--~g~~--~~~~~~~~ 200 (375)
T 2fnu_A 143 LCKKHSLSFLSDSSHALGSEYQ----NKK----VGGFA-LASVFSFHAIKPITT-A--EGGA--VVTNDSEL 200 (375)
T ss_dssp HHHHHTCEEEEECTTCTTCEET----TEE----TTSSS-SEEEEECCTTSSSCC-S--SCEE--EEESCHHH
T ss_pred HHHHcCCEEEEECccccCCeEC----Cee----ccccC-CeEEEeCCCCCCccc-c--CceE--EEeCCHHH
Confidence 8999999999999987654321 000 11111 47788888 99985 6 7888 55 45663
No 187
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.78 E-value=5.6e-18 Score=166.94 Aligned_cols=251 Identities=10% Similarity=0.042 Sum_probs=163.7
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|.....-|+ ..+.+.+++.+.++... + +....+..+.++++++++....+. ..++|++ ++||++|
T Consensus 55 ~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~-~-~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~--~~sGseA 126 (476)
T 3i5t_A 55 RLIDGPAGMWCAQVGY--GRREIVDAMAHQAMVLP-Y-ASPWYMATSPAARLAEKIATLTPG--DLNRIFF--TTGGSTA 126 (476)
T ss_dssp EEEETTHHHHTCTTCB--CCHHHHHHHHHHHHHCC-C-CCTTTCBCHHHHHHHHHHHTTSST--TCCEEEE--ESSHHHH
T ss_pred EEEECCCchhhccCCC--CCHHHHHHHHHHHHhcc-C-cccCccCCHHHHHHHHHHHhcCCC--CcCEEEE--eCchHHH
Confidence 6899988854333333 35677777766554311 2 212245667888888888766532 3468888 9999999
Q ss_pred HHHHHHHHHHh------CCCCEEEEcCCCCcchHHHHhhCCCC-------------eEEEe--cccCCCCCCC-------
Q 017967 164 LRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARVP-------------WSEYR--YYDPKTVGLD------- 215 (363)
Q Consensus 164 l~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~--~~~~~~~~~d------- 215 (363)
++.+..+.... ..++.|++..|+|.++.......+.. +..++ ..... ++.+
T Consensus 127 ~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~ 205 (476)
T 3i5t_A 127 VDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDD 205 (476)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHH
Confidence 99986655433 34579999999998886554432221 22222 21010 1222
Q ss_pred -HHHHHHHHHcC-CCCcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc
Q 017967 216 -FEGMIADIKAA-PGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (363)
Q Consensus 216 -~~~l~~~l~~~-~~~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (363)
++.|++.+... +++..++++.+++|++|. +++.+.+++|.++|+++|+++|+||+|.+|...+. ..........
T Consensus 206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~---~~~~~~~~~v 282 (476)
T 3i5t_A 206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGE---WFASEKVFGV 282 (476)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SCHHHHTTCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccC---ceeeecccCC
Confidence 78888888642 234567777777888885 88999999999999999999999999999865431 2222212222
Q ss_pred CCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhh-------hccccCCCchHHHHHHhcccc
Q 017967 293 GMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRL-------ARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 293 ~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~-------~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.++++ +|||.++ .| +|+|++ +++ ++ +++.+... .....++.+++++.++...|+
T Consensus 283 ~pdi~---t~sK~l~-~G~~plg~v--~~~-~~----i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 344 (476)
T 3i5t_A 283 VPDII---TFAKGVT-SGYVPLGGL--AIS-EA----VLARISGENAKGSWFTNGYTYSNQPVACAAALANIE 344 (476)
T ss_dssp CCSEE---EECGGGG-TTSSCCEEE--EEC-HH----HHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHH
T ss_pred Ccchh---hhhhhhc-CCCcCeEEE--EEC-HH----HHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHH
Confidence 23443 6899998 59 999999 665 66 55555432 222445778888888877665
No 188
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.78 E-value=6.7e-18 Score=164.15 Aligned_cols=159 Identities=12% Similarity=0.016 Sum_probs=124.4
Q ss_pred CCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCC
Q 017967 123 LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDAR 198 (363)
Q Consensus 123 ~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G 198 (363)
.+.....+|++.+|+++.. +..++ +.+|++|+.++ +..++.+||+|++++|+|..+.. .++..|
T Consensus 79 ~~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G 146 (430)
T 3ri6_A 79 SSNPTVEDLEQRLKNLTGA--------LGVLA--LGSGMAAISTA--ILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFG 146 (430)
T ss_dssp -CCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcC
Confidence 3466788999999998643 23444 57788998877 45557899999999999998887 667899
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCC
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~ 278 (363)
++++.++.+ |++.++++++ ++++++++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 147 ~~~~~v~~~-------d~~~l~~ai~---~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~ 213 (430)
T 3ri6_A 147 IEVRFVDVM-------DSLAVEHACD---ETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE 213 (430)
T ss_dssp CEEEEECTT-------CHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC
T ss_pred CEEEEeCCC-------CHHHHHHhhC---CCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 999999862 8899999886 35778889999999999987 5567778999999999999998654321
Q ss_pred CCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 279 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
+ ... ...+++.|+||.++.+|..+|.++
T Consensus 214 ------~----~~~-g~div~~S~sK~l~g~g~~~gG~v 241 (430)
T 3ri6_A 214 ------A----KRL-GVDIEVLSSTKFISGGGTSVGGVL 241 (430)
T ss_dssp ------G----GGG-TCSEEEEECCCEEETTEEECCEEE
T ss_pred ------h----HHc-CCEEEEECCcccccCCCCceEEEE
Confidence 1 111 235889999999987777777773
No 189
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.77 E-value=1.6e-17 Score=160.95 Aligned_cols=181 Identities=16% Similarity=0.174 Sum_probs=133.1
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcC-CCCcchHHH-----
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS-PTWGNHKNI----- 193 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~----- 193 (363)
+.|+ ..|..+|++.+|+++... ..++..++.+|++|+.++ +..++.|||+|++++ |.|..+...
T Consensus 69 y~Y~-~~g~~~Le~~lA~l~g~e-------~alv~p~~~sGt~A~~~a--l~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 138 (427)
T 3hvy_A 69 YGYN-DIGRDSLDRVYANIFNTE-------SAFVRPHFVNGTHAIGAA--LFGNLRPNDTMMSICGMPYDTLHDIIGMDD 138 (427)
T ss_dssp TCTT-CHHHHHHHHHHHHHHTCS-------EEEEETTCCSHHHHHHHH--HHHTCCTTCEEEECSSSCCGGGHHHHTCCT
T ss_pred CCCC-chhHHHHHHHHHHHhCCC-------ceEEeCCCCcHHHHHHHH--HHHhcCCCCEEEEeCCCCchhHHHHhcccc
Confidence 4453 457899999999996432 223211168899998777 566688999999999 999988743
Q ss_pred ------HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC----CCCCCCCCCCHHHHHHHHHHHHh--c
Q 017967 194 ------FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC----AHNPTGIDPTPEQWEKIADVIQE--K 261 (363)
Q Consensus 194 ------~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~----p~NPTG~~~s~~~~~~i~~~~~~--~ 261 (363)
++..|++++.++. +++.+|++.+++++++. ++++++++++ |+||||. ..++++|+++|++ +
T Consensus 139 ~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~-~~tklV~i~~s~gyp~nptg~---v~dl~~i~~ia~~~~~ 211 (427)
T 3hvy_A 139 SKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKD-DSIKLIHIQRSTGYGWRKSLR---IAEIAEIIKSIREVNE 211 (427)
T ss_dssp TCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHC-TTEEEEEEESSCCSSSSCCCC---HHHHHHHHHHHHHHCS
T ss_pred chhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCC-CCCEEEEEECCCCCCCCcccc---HHHHHHHHHHHHHhCC
Confidence 4567999999987 35789999999999842 2466777788 8888875 5789999999999 8
Q ss_pred CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHH
Q 017967 262 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVK 330 (363)
Q Consensus 262 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~ 330 (363)
|+++|+|++|..+.+... .. +. ...++++|+||.+|..| .+.||+ ++ +++.++++.
T Consensus 212 g~~livD~a~~~~~~~~~---p~------~~-gaDiv~~S~sK~lgg~g~~~GG~i--~~-~~~li~~l~ 268 (427)
T 3hvy_A 212 NVIVFVDNCYGEFVEEKE---PT------DV-GADIIAGSLIKNIGGGIATTGGYI--AG-KEEYVTQAT 268 (427)
T ss_dssp SSEEEEECTTCTTTSSSC---GG------GG-TCSEEEEETTSGGGTTTCCSCEEE--EE-CHHHHHHHH
T ss_pred CCEEEEECCccccccCCC---Cc------cc-CCeEEEECCcccccccccceEEEE--EE-CHHHHHHHH
Confidence 999999999988874311 11 11 23588999999998544 456887 55 477444443
No 190
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.77 E-value=4.1e-18 Score=164.21 Aligned_cols=197 Identities=10% Similarity=-0.018 Sum_probs=132.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCC--------CCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--------PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--------~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+.|..+.+ ...++.+.+++.+.+.... ..+. ......++++++++++.. ++++|++
T Consensus 28 ~~~yld~~~~------~~~~~~v~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~g~------~~~~v~~- 93 (416)
T 1qz9_A 28 GVIYLDGNSL------GARPVAALARAQAVIAEEW-GNGLIRSWNSAGWRDLSERLGNRLATLIGA------RDGEVVV- 93 (416)
T ss_dssp TCEECCTTTS------CCCBTTHHHHHHHHHHTCC-CCCGGGHHHHTSGGGHHHHHHHHHHTTTTC------CTTSEEE-
T ss_pred CeEeecCCCc------CCCcHHHHHHHHHHHHHHH-hccCccccchhhHHHHHHHHHHHHHHHcCC------CcccEEE-
Confidence 6778876653 2345566777666654321 1110 023456778888777522 3578988
Q ss_pred eccchhHHHHHHHHHHHHh----CCCCE-EEEcCCCCcchHHHH----hhC--CCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 156 QGLSGTGSLRLAAALIERY----FPGAK-VLISSPTWGNHKNIF----NDA--RVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~----~~gd~-Vlv~~P~y~~~~~~~----~~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
|.|++++++++...+..+ .+||+ |++..++|+.+...+ +.. |++++.++. ++.+++.++
T Consensus 94 -~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~ 163 (416)
T 1qz9_A 94 -TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAID 163 (416)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCS
T ss_pred -eCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhC
Confidence 999999988764332223 78987 555556887654433 233 888888864 678888876
Q ss_pred cCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc
Q 017967 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (363)
Q Consensus 225 ~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 304 (363)
++++++++++|+||||.+++ +++|.++|+++|+++|+|++|...... . .+..+ ...+++.|++|
T Consensus 164 ---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~---~---~~~~~----~~d~~~~s~~K 227 (416)
T 1qz9_A 164 ---QDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGAVP---V---DLHQA----GADYAIGCTYK 227 (416)
T ss_dssp ---TTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC---C---CHHHH----TCSEEEECSSS
T ss_pred ---CCceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccCcC---C---Chhhc----CCCEEEecCcc
Confidence 35778899999999999998 577788899999999999998732111 1 12221 24478899999
Q ss_pred ccccccccc-eEEEEeeCChh
Q 017967 305 NLGLYAERI-GAMNVVCSSSD 324 (363)
Q Consensus 305 ~~~l~G~Rv-G~i~~v~~~~~ 324 (363)
.++ +|.|+ ||+ +++ ++
T Consensus 228 ~l~-~g~~~~g~l--~~~-~~ 244 (416)
T 1qz9_A 228 YLN-GGPGSQAFV--WVS-PQ 244 (416)
T ss_dssp TTC-CCTTCCCEE--EEC-TT
T ss_pred cCC-CCCCCeEEE--EEC-HH
Confidence 985 78888 999 665 44
No 191
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.77 E-value=9.5e-18 Score=164.36 Aligned_cols=214 Identities=11% Similarity=0.074 Sum_probs=139.1
Q ss_pred CcEEeecccc-CCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH
Q 017967 84 KKLNLGVGAY-RTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (363)
Q Consensus 84 ~~i~l~~g~~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (363)
+.++|..|.. .|......+ +.+.+++.+.+..+. ..|.+..+..+|++++++++.. +++++ |+||++
T Consensus 33 ~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~~--------~~v~~--t~~gt~ 100 (467)
T 2oqx_A 33 NPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFGY--------QYTIP--THQGRG 100 (467)
T ss_dssp CGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHCC--------SEEEE--EC--CC
T ss_pred CceeccCCCeeEecccCCCc-HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhCc--------CcEEE--cCCcHH
Confidence 5566666642 121111112 455555555543333 4688888999999999999732 57877 999999
Q ss_pred HHHHHHHHHHHhCC-----C----CEEEEcCCCCcchHHHHhhCCCCeEEEecc----cC----CCCCCCHHHHHHHHHc
Q 017967 163 SLRLAAALIERYFP-----G----AKVLISSPTWGNHKNIFNDARVPWSEYRYY----DP----KTVGLDFEGMIADIKA 225 (363)
Q Consensus 163 al~l~~~l~~~~~~-----g----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~----~~----~~~~~d~~~l~~~l~~ 225 (363)
|++++... ...+ | |.|++..+.|..+.......|..++..... .. .++.+|++.|++++++
T Consensus 101 A~~~al~~--~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~ 178 (467)
T 2oqx_A 101 AEQIYIPV--LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_dssp SHHHHHHH--HHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHH
T ss_pred HHHHHHHH--HhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHh
Confidence 99888433 3456 8 888887655565666666666665543210 01 2356899999999974
Q ss_pred CC-CCcEEEEEcCCCCCC-CCCCCHHHHHHHHHHHHhcCCeEEEecCCCC----------CcCCCCCCchhHHHHHH---
Q 017967 226 AP-GGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG----------FASGSLDNDASSVRLFA--- 290 (363)
Q Consensus 226 ~~-~~~~~~~i~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~----------~~~~~~~~~~~~~~~~~--- 290 (363)
.. ++++++++++||||| |.+++.+++++|.++|++||+++|+|++... ..+.+. +...+.
T Consensus 179 ~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~-----~~~~~~~~~ 253 (467)
T 2oqx_A 179 VGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDW-----TIEQITRET 253 (467)
T ss_dssp HCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTS-----CHHHHHHHH
T ss_pred cCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCc-----cHHHHhhhh
Confidence 21 246678889999998 9999999999999999999999999954211 122211 122221
Q ss_pred -hcCCeEEEEEcCccccccc-cccceEEEEeeCCh
Q 017967 291 -TRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSS 323 (363)
Q Consensus 291 -~~~~~vi~~~S~SK~~~l~-G~RvG~i~~v~~~~ 323 (363)
... + +++.|+||.+|++ | ||+ +++++
T Consensus 254 ~~~~-d-~~~~s~sK~~g~~~G---g~~--~~~~~ 281 (467)
T 2oqx_A 254 YKYA-D-MLAMSAKKDAMVPMG---GLL--CMKDD 281 (467)
T ss_dssp GGGC-S-EEEEESSSTTCCSSC---EEE--EECSG
T ss_pred hccC-C-eEEEecccccCCCCc---eEE--EecCh
Confidence 222 3 3578999999876 3 666 56655
No 192
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.77 E-value=5.8e-18 Score=166.73 Aligned_cols=174 Identities=14% Similarity=0.046 Sum_probs=131.2
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH--hCCCC-----EEEEcCCCCcchHHHHhhC
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER--YFPGA-----KVLISSPTWGNHKNIFNDA 197 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~--~~~gd-----~Vlv~~P~y~~~~~~~~~~ 197 (363)
..|..++++++++++....+... .++ .+.||++++.++..++.. ..+|| +|+++.|+|+.+...++..
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~~~---~~~--~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~ 176 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGMDA---ITL--EPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMA 176 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSE---EEC--CCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHCCCc---eee--cChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHC
Confidence 56777888888877765544421 233 389999998875322221 24887 9999999999999999999
Q ss_pred CCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 198 RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 198 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
|++++.++++ +++.+|++.|+++++ ++++++++++| ||||.+. +++++|.++|+++|+++|+|++|.....+
T Consensus 177 G~~vv~v~~~--~~~~~d~~~L~~~i~---~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g 248 (474)
T 1wyu_B 177 GYQVREIPSG--PEGEVDLEALKRELG---PHVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG 248 (474)
T ss_dssp TCEEEEECBC--TTSSBCHHHHHHHCS---TTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT
T ss_pred CCEEEEecCC--CCCCcCHHHHHHhhC---CCceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc
Confidence 9999999984 457899999999986 34677888887 6999873 46888999999999999999999765543
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCccccccc-c---ccceEEEEeeCC
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLY-A---ERIGAMNVVCSS 322 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~-G---~RvG~i~~v~~~ 322 (363)
.. ....+ ...+++.|++|.|+.+ | .|+||+ ++++
T Consensus 249 ~~-----~~~~~----g~di~~~s~~K~~~~p~g~gG~~~G~~--~~~~ 286 (474)
T 1wyu_B 249 WA-----RPGDM----GFDVVHLNLHKTFTVPHGGGGPGSGPV--GVKA 286 (474)
T ss_dssp TC-----CHHHH----TCSEEECCTTTTTCCCCTTSCCCCCCE--EECG
T ss_pred CC-----CcccC----CCcEEEEeCccccccCCCCCCCCeEEE--EEcH
Confidence 11 11111 2457788999999877 5 599999 7763
No 193
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.76 E-value=1.1e-17 Score=162.28 Aligned_cols=184 Identities=20% Similarity=0.124 Sum_probs=133.0
Q ss_pred CccccHHHHHHHHHHHccCCCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCC
Q 017967 99 QPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 176 (363)
Q Consensus 99 ~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~ 176 (363)
.++..+.+.++..........+.|.. .....++++++++++... +.++ +.+|++|+.++ +..++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~-------~~v~---~~sGt~A~~~~--l~~~~~~ 96 (421)
T 2ctz_A 29 TSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGK-------AALA---TASGHAAQFLA--LTTLAQA 96 (421)
T ss_dssp SCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCS-------EEEE---ESSHHHHHHHH--HHHHCCT
T ss_pred ceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCC-------ceEE---ecCHHHHHHHH--HHHHhCC
Confidence 34455555555433321111244543 334689999999997432 2343 45669998888 4444679
Q ss_pred CCEEEEcCCCCcchHHHH----hhCCCCeEEE-ecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHH
Q 017967 177 GAKVLISSPTWGNHKNIF----NDARVPWSEY-RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQW 251 (363)
Q Consensus 177 gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~ 251 (363)
||+|+++.++|..+...+ +..|++++.+ +.+ |++.++++++ ++++++++++|+||||.+++ +
T Consensus 97 gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------d~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~---l 163 (421)
T 2ctz_A 97 GDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-------RPEEFLALTD---EKTRAWWVESIGNPALNIPD---L 163 (421)
T ss_dssp TCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-------CHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---H
T ss_pred CCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-------CHHHHHHhhc---cCCeEEEEECCCCCCCcccC---H
Confidence 999999999999887765 6789999888 651 7899999886 35778888999999999998 6
Q ss_pred HHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEE
Q 017967 252 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (363)
Q Consensus 252 ~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~ 317 (363)
++|.++|+++|+++|+|++|..+.+.. . +. .. ...+++.|++|.++.+|.|+|+++
T Consensus 164 ~~i~~~a~~~g~~livD~~~~~~g~~~---~--~~----~~-~~Di~~~s~~K~l~~~g~~~G~~~ 219 (421)
T 2ctz_A 164 EALAQAAREKGVALIVDNTFGMGGYLL---R--PL----AW-GAALVTHSLTKWVGGHGAVIAGAI 219 (421)
T ss_dssp HHHHHHHHHHTCEEEEECGGGGGGTSC---C--GG----GG-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred HHHHHHHHHcCCEEEEECCcccccccC---C--cc----cc-CCeEEEECCcccccCCCCcEEEEE
Confidence 778888999999999999983333321 1 11 11 245889999999999999999993
No 194
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.75 E-value=1e-17 Score=164.82 Aligned_cols=252 Identities=9% Similarity=0.023 Sum_probs=156.1
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHH
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (363)
.+||+..|.....-|+ -.+.+.+++.+.+.... +.|....+..+.+.++++.+....+ ...++|++ ++||++|
T Consensus 56 ~ylD~~s~~~~~~lGh--~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~--~~sGseA 128 (472)
T 3hmu_A 56 EILDAMAGLWCVNIGY--GRDELAEVAARQMRELP-YYNTFFKTTHVPAIALAQKLAELAP--GDLNHVFF--AGGGSEA 128 (472)
T ss_dssp EEECTTHHHHTCTTCB--CCHHHHHHHHHHHHHCS-CCCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEE--ESSHHHH
T ss_pred EEEECCCchhhccCCC--CCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCCHHHH
Confidence 6899988754333343 25677777766554321 2233333344444555555433322 23468888 9999999
Q ss_pred HHHHHHHHHHh------CCCCEEEEcCCCCcchHHHHhhCCC------------CeEEEecc---cCCCCCCC-------
Q 017967 164 LRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDARV------------PWSEYRYY---DPKTVGLD------- 215 (363)
Q Consensus 164 l~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~------------~~~~v~~~---~~~~~~~d------- 215 (363)
++.+..+.... .++++|++.+|+|.++.......+. .+..++.. ...++ .|
T Consensus 129 ~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~ 207 (472)
T 3hmu_A 129 NDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLA 207 (472)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHH
Confidence 99986655433 1458999999999887654433222 23344421 00111 33
Q ss_pred -HHHHHHHHHcCC-CCcEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc
Q 017967 216 -FEGMIADIKAAP-GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (363)
Q Consensus 216 -~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (363)
++.|++.+.+.. +++.++++..++|++|... +++.+++|.++|+++|+++|+||+|.+|...+. ...... ...
T Consensus 208 ~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~---~~a~~~-~~v 283 (472)
T 3hmu_A 208 RARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN---WFGTQT-MGI 283 (472)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SCHHHH-HTC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc---cchhHH-hCC
Confidence 788888886422 3455666555566777655 889999999999999999999999999865431 222222 233
Q ss_pred CCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHH--hhhccccCCCchHHHHHHhcccc
Q 017967 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK--RLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 293 ~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~--~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
.++++ +|||.++..|+|+||+ +++ ++ +++.+. .......++.++++|.++...|+
T Consensus 284 ~pdi~---t~sK~l~gg~~plG~v--~~~-~~----i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 340 (472)
T 3hmu_A 284 RPHIM---TIAKGLSSGYAPIGGS--IVC-DE----VAHVIGKDEFNHGYTYSGHPVAAAVALENLR 340 (472)
T ss_dssp CCSEE---EECGGGTTTSSCCEEE--EEE-HH----HHHHHTTSCBCCCCTTTTCHHHHHHHHHHHH
T ss_pred CCcee---eechhhhcCCcceEEE--EEC-HH----HHHhcccCCccccCCCCCCHHHHHHHHHHHH
Confidence 34444 5899998555999999 665 66 555552 11223345778888888877665
No 195
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.75 E-value=1.5e-17 Score=159.14 Aligned_cols=191 Identities=12% Similarity=-0.071 Sum_probs=134.1
Q ss_pred cHHHHHHHHHHHccCCCCCCCC-CcchHHHHHHH-HHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-hCCCCE
Q 017967 103 LDVVKKAENLMLERGENKEYLP-IEGLAAFNKVT-AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK 179 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~-~~G~~~lr~ai-a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-~~~gd~ 179 (363)
++.+.+++.+.+..+. |.+ .....+|++++ |+++. . .+++++ +.||+.|+.++ +..+ +.|||+
T Consensus 15 ~~~i~~a~~~~~~~~~---~~~~~~~~~~l~~~~~a~~~g-~------~~~~v~--~~sgt~al~~a--l~~l~~~~Gd~ 80 (377)
T 3ju7_A 15 VIEYLDELKEIDASHI---YTNYGPINQRFEQTIMSGFFQ-N------RGAVTT--VANATLGLMAA--IQLKKRKKGKY 80 (377)
T ss_dssp GGGGHHHHHHHHHHTC---CSSSCHHHHHHHHHHHHHTST-T------CSEEEE--ESCHHHHHHHH--HHHHSCTTCCE
T ss_pred cHHHHHHHHHHHHcCC---cccCCHHHHHHHHHHHHHHhC-C------CCeEEE--eCCHHHHHHHH--HHHcCCCCcCE
Confidence 4556666666554433 332 45678999999 99864 1 246666 89999998888 4455 679999
Q ss_pred EEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHH-HcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Q 017967 180 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI-KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (363)
Q Consensus 180 Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l-~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~ 258 (363)
|+++.|+|..+...++..|++++.++++ ++++.+|++.+++++ +.. .++++++ |+||||...+. ++|.++|
T Consensus 81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~~~-~~tk~v~---~~~~~G~~~~~---~~i~~la 152 (377)
T 3ju7_A 81 ALMPSFTFPATPLAAIWCGLEPYFIDIS-IDDWYMDKTVLWDKIEELK-EEVAIVV---PYATFGSWMNL---EEYEELE 152 (377)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBC-TTTCSBCHHHHHHHHHHHG-GGEEEEC---CBCGGGBCCCC---HHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecC-CccCCcCHHHHHHHHhcCC-CCceEEE---EECCCCCccCH---HHHHHHH
Confidence 9999999999999999999999999985 357899999999988 421 1255555 67899998764 5566678
Q ss_pred HhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHH
Q 017967 259 QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA 326 (363)
Q Consensus 259 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~ 326 (363)
+ +|+++|+|+++........ ...- ....+-.++..+.+|.++. | +.|++ ++.+++..
T Consensus 153 ~-~~~~vi~D~a~a~g~~~~~----~~~g--~~~~d~~~~S~~~~K~l~~-g-~gG~~--~~~~~~l~ 209 (377)
T 3ju7_A 153 K-KGVPVVVDAAPGFGLMNGG----MHYG--QDFSGMIIYSFHATKPFGI-G-EGGLI--YSKNEEDI 209 (377)
T ss_dssp H-TTCCBEEECTTCTTCEETT----EETT--TTCSSEEEEECBTTSSSCC-B-SCEEE--EESCHHHH
T ss_pred h-cCCEEEEECCCccCCeECC----Eecc--CCCCcEEEEECCCCCcCCC-C-CcEEE--EECCHHHH
Confidence 8 9999999999764332110 0000 0012333444445799984 6 68888 78878733
No 196
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.75 E-value=1.9e-17 Score=161.23 Aligned_cols=185 Identities=14% Similarity=-0.063 Sum_probs=136.9
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH---------
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER--------- 173 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~--------- 173 (363)
.+.+.+++.+.+.. ..|.+..+..++++++++++.. +++++ +.+|++++.++. ..+
T Consensus 42 ~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~g~--------~~~i~--~~sGt~a~~~al--~~l~~~~~~~~~ 106 (437)
T 3bb8_A 42 GTKELQLMVEASLD---GWLTTGRFNDAFEKKLGEYLGV--------PYVLT--TTSGSSANLLAL--TALTSPKLGVRA 106 (437)
T ss_dssp CHHHHHHHHHHHHH---CCCBSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHHH--HHTTCGGGGGGS
T ss_pred CHHHHHHHHHHHHc---CCcCCChHHHHHHHHHHHHHCC--------CcEEE--eCCHHHHHHHHH--HHhhhccccccc
Confidence 34555665555533 2366778899999999999743 24555 788889988883 333
Q ss_pred hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEc-CCCCCCCCCCCHHHHH
Q 017967 174 YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG-CAHNPTGIDPTPEQWE 252 (363)
Q Consensus 174 ~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~-~p~NPTG~~~s~~~~~ 252 (363)
+.+||+|+++.|+|..+...++..|++++.+++++ +++.+|++.+++.+++ ++++++++ +++|| .+++
T Consensus 107 ~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~---~~~~v~~~~~~g~~-------~~~~ 175 (437)
T 3bb8_A 107 LKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSD---KTKAIMIAHTLGNL-------FDLA 175 (437)
T ss_dssp CCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCT---TEEEEEEECGGGCC-------CCHH
T ss_pred CCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCC---CCeEEEEeCCCCCh-------hcHH
Confidence 56899999999999999999999999999999853 3678999999998863 45666665 46666 3577
Q ss_pred HHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 253 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 253 ~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+|.++|+++|+++|+|++|......+. .. .....+ +++.||+|.++++|.|.|++ +++++.
T Consensus 176 ~i~~l~~~~~~~li~D~a~~~g~~~~~--~~------~~~~~d-~~~~s~~~~k~l~~g~gg~~--~~~~~~ 236 (437)
T 3bb8_A 176 EVRRVADKYNLWLIEDCCDALGSTYDG--KM------AGTFGD-IGTVSFYPAKHITMGEGGAV--FTQSAE 236 (437)
T ss_dssp HHHHHHHHHTCEEEEECTTCTTCEETT--EE------TTSSSS-EEEEECSTTSSSCCSSCEEE--EESCHH
T ss_pred HHHHHHHHcCCEEEEECccccCceECC--ee------cccccC-EEEEECcCCcCCCCCCeEEE--EeCCHH
Confidence 888889999999999999984322111 00 011122 67789999999999999999 776443
No 197
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.74 E-value=4.6e-17 Score=159.20 Aligned_cols=203 Identities=12% Similarity=0.025 Sum_probs=144.4
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC---CcEEEEeccchhHHHHHHHHHHHH-h---
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE---QRVATVQGLSGTGSLRLAAALIER-Y--- 174 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~---~~i~~~~t~ggt~al~l~~~l~~~-~--- 174 (363)
..+.+.+++...+.... .+|....|..++++++.+++....|.+.+. ..+++ |.|||+|+.++...+.. .
T Consensus 54 ~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~--t~ggtea~~~al~a~~~~~~~~ 130 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN--TIGSSEACMLGGMAMKWRWRKR 130 (452)
T ss_dssp CCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEE--eCCHHHHHHHHHHHHHHHHHHH
Confidence 44677777766654322 456666788888888877776655543221 13766 99999998887432211 0
Q ss_pred --CCC-----CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCC
Q 017967 175 --FPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (363)
Q Consensus 175 --~~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s 247 (363)
.+| +.|++++ +|..+...++..|++++.+|+++ +++.+|++.|++++++ +++++++++|+||||.+.+
T Consensus 131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~~~ 205 (452)
T 2dgk_A 131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDE---NTIGVVPTFGVTYTGNYEF 205 (452)
T ss_dssp HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCT---TEEEEECBBSCTTTCBBCC
T ss_pred HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhh---CCEEEEEEcCCcCCcccCC
Confidence 155 5899999 99999999999999999999853 3689999999999873 5778888999999999965
Q ss_pred HHHHHHHHHHHHhc------CCeEEEecCCCCCcC---CCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEE
Q 017967 248 PEQWEKIADVIQEK------NHIPFFDVAYQGFAS---GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (363)
Q Consensus 248 ~~~~~~i~~~~~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~ 318 (363)
+++|.++|+++ ++++++|++|.++.. ... . ... .....-..++.|++| |++.|+|+||+
T Consensus 206 ---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~-~~~----~~~~~~d~~~~~~hK-~~~~~~~~G~~-- 273 (452)
T 2dgk_A 206 ---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPD-I-VWD----FRLPRVKSISASGHK-FGLAPLGCGWV-- 273 (452)
T ss_dssp ---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTT-C-CCS----TTSTTEEEEEEETTT-TTCCCSSCEEE--
T ss_pred ---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCcc-c-hhh----cCCCCCcEEEECccc-ccCCCCCeEEE--
Confidence 55666778885 999999999988642 110 0 000 111123456778899 65689999999
Q ss_pred eeCChh
Q 017967 319 VCSSSD 324 (363)
Q Consensus 319 v~~~~~ 324 (363)
++.+++
T Consensus 274 ~~~~~~ 279 (452)
T 2dgk_A 274 IWRDEE 279 (452)
T ss_dssp EESSGG
T ss_pred EEcCHH
Confidence 776554
No 198
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.74 E-value=1.3e-18 Score=164.90 Aligned_cols=216 Identities=9% Similarity=-0.019 Sum_probs=136.3
Q ss_pred ccccHHHHHHHHHHHccCC--------CCCCCCCcchHHHHHHHHHHHhcCCCCcccCC-cE-EEEeccchhHHHHHHHH
Q 017967 100 PYVLDVVKKAENLMLERGE--------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RV-ATVQGLSGTGSLRLAAA 169 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i-~~~~t~ggt~al~l~~~ 169 (363)
..+++.+.+++.+.+.... ..+|. .+..++++++.+.+....+. .++ ++ ++ |.||++++.++
T Consensus 13 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~--t~g~t~a~~~~-- 84 (362)
T 2c0r_A 13 AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFI--QGGASTQFAMI-- 84 (362)
T ss_dssp CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEE--SSHHHHHHHHH--
T ss_pred CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEE--CCCchHHHHHH--
Confidence 4467788888776553210 01121 23344445555544443343 232 54 45 89999999988
Q ss_pred HHHHhCCCCEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCC--CCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC
Q 017967 170 LIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVG--LDFEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (363)
Q Consensus 170 l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~--~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~ 245 (363)
+..++.|||+|+++.+.+... ...++..| +++.++++.+++++ +|.+.++ ++ ++++++++++|+||||..
T Consensus 85 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~---~~t~~v~~~~~~n~tG~~ 158 (362)
T 2c0r_A 85 PMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ---DNAAYLHLTSNETIEGAQ 158 (362)
T ss_dssp HHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC---TTEEEEEEESEETTTTEE
T ss_pred HHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC---CCcCEEEEeCCcCcccee
Confidence 455578999999887764442 45667789 99999874222233 4666553 33 357888889999999997
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhH
Q 017967 246 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 246 ~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~ 325 (363)
++ ++++| +|+++|+|++|..+... . .+ ... .+++.|+||.+|++| +||+ +++ ++.
T Consensus 159 ~~--~l~~i------~~~~vivD~a~~~~~~~---~---~~----~~~--d~~~~s~~K~~g~~G--~G~l--~~~-~~~ 213 (362)
T 2c0r_A 159 FK--AFPDT------GSVPLIGDMSSDILSRP---F---DL----NQF--GLVYAGAQKNLGPSG--VTVV--IVR-EDL 213 (362)
T ss_dssp CS--SCCCC------TTSCEEEECTTTTTSSC---C---CG----GGC--SEEEEETTTTTCCSS--CEEE--EEE-GGG
T ss_pred cc--ccccc------CCCEEEEEChhhccCCc---c---ch----hHC--cEEEEeccccccCcC--cEEE--EEc-HHH
Confidence 55 34444 89999999999866432 1 11 122 377889999999888 8999 665 452
Q ss_pred HHHHHHHHHhh------------hccccCCCchHHHHHHhccccc
Q 017967 326 AARVKSQLKRL------------ARPMYSNPPPMLLGIQLSSMNG 358 (363)
Q Consensus 326 ~~~~~~~l~~~------------~~~~~~~~s~~~q~~~~~~l~~ 358 (363)
++.+... ......+++.+.|.++...|+.
T Consensus 214 ----~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~ 254 (362)
T 2c0r_A 214 ----VAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKW 254 (362)
T ss_dssp ----SSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH
T ss_pred ----HhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHH
Confidence 2222211 1123457788888888766653
No 199
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.74 E-value=2.7e-19 Score=169.02 Aligned_cols=193 Identities=10% Similarity=-0.023 Sum_probs=129.2
Q ss_pred cEEeeccccCCCCCCccccHHHHHHHHHHHccCC---CCCCCC---Cc----chHHHHHHHHHHHhcCCCCcccCCcEEE
Q 017967 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLP---IE----GLAAFNKVTAELLFGADNSVLKEQRVAT 154 (363)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~Y~~---~~----G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (363)
+++++.|. +.+++.+.+++.+.+.... ...|.. .. ...++++.+++++.. . ++++|++
T Consensus 4 ~~~~~~g~-------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~----~-~~~~v~~ 71 (360)
T 1w23_A 4 VFNFNAGP-------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQI----P-NDYQILF 71 (360)
T ss_dssp CEECCSSS-------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTC----C-TTEEEEE
T ss_pred eEeecCCC-------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCC----C-CCceEEE
Confidence 56666553 3456788888776653210 011111 22 345777788877632 1 2468877
Q ss_pred Eeccch-hHHHHHHHHHHHHhCC---CCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHH-HHHcCCCC
Q 017967 155 VQGLSG-TGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGG 229 (363)
Q Consensus 155 ~~t~gg-t~al~l~~~l~~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~-~l~~~~~~ 229 (363)
|.|+ ++++.++ +..++.+ ||.|+++.++|.. ...++..| +++.++++++ ++.+|++++++ .++ ++
T Consensus 72 --~~g~gt~al~~~--~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~-~~~~d~~~l~~~~i~---~~ 141 (360)
T 1w23_A 72 --LQGGASLQFTML--PMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKA-NSYQSIPDFSEFQLN---EN 141 (360)
T ss_dssp --ESSHHHHHHHHH--HHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGG-GTSCSCCCGGGCCCC---TT
T ss_pred --ECCcchHHHHHH--HHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccc-cCcCCccchHhhccC---CC
Confidence 8998 9998887 4455554 5667777666654 34467789 9999998532 33478888887 664 35
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccc
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~ 309 (363)
++++++++||||||.+++ ++ ++++|+++|+|++|..+... . .+ ... .++++|+||.+|.+
T Consensus 142 ~k~v~~~~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~~~~---~---~~----~~~--di~~~s~sK~~~~~ 201 (360)
T 1w23_A 142 DAYLHITSNNTIYGTQYQ--NF------PEINHAPLIADMSSDILSRP---L---KV----NQF--GMIYAGAQKNLGPS 201 (360)
T ss_dssp EEEEEEESEETTTTEECS--SC------CCCCSSCEEEECTTTTTSSC---C---CG----GGC--SEEEEETTTTTSCT
T ss_pred CCEEEEeCCCCCcceecc--cc------cccCCceEEEechhhcCCCC---c---Cc----ccC--CEEEEEcccccCCC
Confidence 778888999999999987 33 33799999999999876532 1 11 111 27899999999966
Q ss_pred cccceEEEEeeCChh
Q 017967 310 AERIGAMNVVCSSSD 324 (363)
Q Consensus 310 G~RvG~i~~v~~~~~ 324 (363)
| +||+ +++ ++
T Consensus 202 G--~G~~--~~~-~~ 211 (360)
T 1w23_A 202 G--VTVV--IVK-KD 211 (360)
T ss_dssp T--CEEE--EEE-HH
T ss_pred C--cEEE--EEc-HH
Confidence 6 8999 665 55
No 200
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.73 E-value=4.2e-17 Score=159.96 Aligned_cols=169 Identities=15% Similarity=0.038 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCC---CEEEEcCCCCcchHH----HHhhCCCC
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNHKN----IFNDARVP 200 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~g---d~Vlv~~P~y~~~~~----~~~~~G~~ 200 (363)
..++++.+++++... +++|++ |.|++++++++ +...+.+| ++|+++.|+|+.... .++..|++
T Consensus 113 ~~~l~~~la~~~g~~------~~~v~~--t~g~t~al~~~--~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~ 182 (465)
T 3e9k_A 113 DESIVGLMKDIVGAN------EKEIAL--MNALTVNLHLL--MLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLN 182 (465)
T ss_dssp THHHHGGGHHHHTCC------GGGEEE--CSCHHHHHHHH--HHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCC------cCCEEE--ECCHHHHHHHH--HHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCc
Confidence 366889999986432 689988 99999999988 44445555 459999999987444 56678988
Q ss_pred eE----EE-ecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 201 WS----EY-RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 201 ~~----~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
++ .+ +. ++++.+|++++++++.++.++++++++++||||||.+++. ++|.++|+++|+++|+|+++....
T Consensus 183 ~~~~~v~~~~~--~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~la~~~g~~vi~D~a~~~g~ 257 (465)
T 3e9k_A 183 IEESMRMIKPR--EGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNI---PAITKAGQAKGCYVGFDLAHAVGN 257 (465)
T ss_dssp HHHHEEEECCC--TTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCH---HHHHHHHHHTTCEEEEECTTTTTT
T ss_pred ceeeeEEEecC--CCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecH---HHHHHHHHHcCCEEEEEhhhhcCC
Confidence 63 22 33 3457789999999997432357888999999999999985 566777999999999999976433
Q ss_pred CCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
.. ..+.. ....+++.|++|.++....++|++ ++. ++
T Consensus 258 ~~------~~~~~----~~~D~~~~s~~K~l~~gp~~~g~l--~~~-~~ 293 (465)
T 3e9k_A 258 VE------LYLHD----WGVDFACWCSYKYLNAGAGGIAGA--FIH-EK 293 (465)
T ss_dssp SC------CCHHH----HTCCEEEECSSSTTCCCTTCCCEE--EEC-GG
T ss_pred cC------Cchhh----cCCCEEEECcccccccCCCceEEE--EEc-HH
Confidence 21 11111 134578899999993223378999 554 55
No 201
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.73 E-value=1.7e-17 Score=162.34 Aligned_cols=245 Identities=11% Similarity=0.026 Sum_probs=152.4
Q ss_pred CcEEeeccccCCCCCCccccHHHH-H-HHHH---HHccCCC--CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEe
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVK-K-AENL---MLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~-~-a~~~---~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (363)
.++|+..|.+...-++ ..+.+. + ++.+ ....... ..| ......++++.+++++.. ..+++|++
T Consensus 55 ~ylD~~~~~~~~~lG~--~~p~v~~~~A~~~~~~~~~~~~~~~~~~-~~~~~~~la~~la~~~~~-----~~~~~v~~-- 124 (449)
T 2cjg_A 55 RYLDMFTFVASSALGM--NPPALVDDREFHAELMQAALNKPSNSDV-YSVAMARFVETFARVLGD-----PALPHLFF-- 124 (449)
T ss_dssp EEEESSHHHHTCSSCB--SCHHHHTCHHHHHHHHHHHTCCCCTTTC-CCHHHHHHHHHHHHHHCC-----TTCCEEEE--
T ss_pred EEEEccCCccccCCCC--CCHHHHHHHHHHHHHHHHHhcCCCCccc-CCHHHHHHHHHHHHhcCC-----CCCCEEEE--
Confidence 5789877764322232 245666 5 6555 3333211 113 333456777888887631 23578988
Q ss_pred ccchhHHHHHHHHHHHHh-C----------C-CCEEEEcCCCCcchHHHHh-hC--------CC-----CeEEEecccCC
Q 017967 157 GLSGTGSLRLAAALIERY-F----------P-GAKVLISSPTWGNHKNIFN-DA--------RV-----PWSEYRYYDPK 210 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~-~----------~-gd~Vlv~~P~y~~~~~~~~-~~--------G~-----~~~~v~~~~~~ 210 (363)
++||++|++++..+...+ . + ||+|++.+|+|.++..... .. |. .++.+|..+..
T Consensus 125 ~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 204 (449)
T 2cjg_A 125 VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPG 204 (449)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTT
T ss_pred eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCch
Confidence 999999999986543322 1 2 8999999999987654321 11 22 44555552200
Q ss_pred CC--------CCCHHHHHHHHHcCCCCcEEEEEcCCCCCCC-CCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCC
Q 017967 211 TV--------GLDFEGMIADIKAAPGGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (363)
Q Consensus 211 ~~--------~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 281 (363)
.. ..+++.|++.+++..++++++++...+|||| ..++.+++++|.++|+++|+++|+||+|.++...+.
T Consensus 205 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-- 282 (449)
T 2cjg_A 205 LDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT-- 282 (449)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--
T ss_pred hhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc--
Confidence 01 1456668888864334456666554568999 599999999999999999999999999998865431
Q ss_pred chhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHH-----HhhhccccCCCchHHHHHHhccc
Q 017967 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL-----KRLARPMYSNPPPMLLGIQLSSM 356 (363)
Q Consensus 282 ~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l-----~~~~~~~~~~~s~~~q~~~~~~l 356 (363)
...... .+..++++ +|||.+ |+||+ +++ ++ +++.+ ........++.++++|.++...|
T Consensus 283 -~~~~~~-~~~~~di~---t~sK~l-----~iG~~--~~~-~~----~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal 345 (449)
T 2cjg_A 283 -AWAYQQ-LDVAPDIV---AFGKKT-----QVCGV--MAG-RR----VDEVADNVFAVPSRLNSTWGGNLTDMVRARRIL 345 (449)
T ss_dssp -SSTHHH-HTCCCSEE---EECGGG-----SSEEE--EEC-GG----GGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHH
T ss_pred -ceeecc-cCCCceEE---EecCcc-----cEEEE--EEC-HH----HhhhhhhcccCCcccccCCCCCHHHHHHHHHHH
Confidence 112222 23334433 789987 89999 776 55 34331 11122234567888888887666
Q ss_pred c
Q 017967 357 N 357 (363)
Q Consensus 357 ~ 357 (363)
+
T Consensus 346 ~ 346 (449)
T 2cjg_A 346 E 346 (449)
T ss_dssp H
T ss_pred H
Confidence 5
No 202
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.72 E-value=7.7e-17 Score=155.44 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=95.2
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcc---hHHHHhhCCC--CeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGN---HKNIFNDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~---~~~~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
+.||++++.++ +...+.+||+|+++.|+|.. +.......|. +++.++.+ ++++++|++.+++.+++ .+++
T Consensus 100 ~~~Gs~a~~~a--l~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~--~~~~ 174 (425)
T 3ecd_A 100 PHSGAQANGAV--MLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS-RDTMLIDYDQVEALAQQ--HKPS 174 (425)
T ss_dssp CSSHHHHHHHH--HHHHCCTTCEEEEECC------------------CEEEEECCC-TTTSSCCHHHHHHHHHH--HCCS
T ss_pred cCchHHHHHHH--HHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCC-cccCccCHHHHHHHHhh--cCCc
Confidence 78889998877 44457799999999999987 3323234455 44455553 34588999999999974 1345
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC-CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
++++++|+||+. .++++|.++|+++|+++|+||+| .++.+.+.. ... ... ..+++.||||.+ +|
T Consensus 175 ~v~~~~~~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~--~~~----~~~--~di~~~s~sK~l--~g 239 (425)
T 3ecd_A 175 LIIAGFSAYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRH--ANP----VEH--AHVVTSTTHKTL--RG 239 (425)
T ss_dssp EEEEECSCCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSS--CCG----GGT--CSEEEEESSGGG--CC
T ss_pred EEEEccccCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccc--cCc----hhc--CcEEEecCCccc--CC
Confidence 677788999753 34578888999999999999994 333332210 001 111 227899999988 68
Q ss_pred ccceEEEEeeCChh
Q 017967 311 ERIGAMNVVCSSSD 324 (363)
Q Consensus 311 ~RvG~i~~v~~~~~ 324 (363)
.|+||+ ++++++
T Consensus 240 ~~~g~~--~~~~~~ 251 (425)
T 3ecd_A 240 PRGGFV--LTNDEE 251 (425)
T ss_dssp CSCEEE--EESCHH
T ss_pred CCcEEE--EeCCHH
Confidence 899999 887666
No 203
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.70 E-value=1.3e-16 Score=156.26 Aligned_cols=181 Identities=14% Similarity=0.054 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhH-HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG-SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~-al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
..++.+++.+++.+..|.. ++ +++ |.|||+ ++.++...+....+|+.|+++++.|..+...++..|++++.+++
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~--t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~ 205 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIA--TPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVET 205 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEE--ESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEE--eCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEE
Confidence 3444444444443333332 23 666 999995 43323211111126788999999999999999999999999886
Q ss_pred cc-CCCCCCCHHHHHHHH-HcC-CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 207 YD-PKTVGLDFEGMIADI-KAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 207 ~~-~~~~~~d~~~l~~~l-~~~-~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
.. ++++.+|++.|++++ +.. ..+++++++++||||||.+.+ +++|.++|+++|+++++|++|..+..+- .
T Consensus 206 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~----~ 278 (456)
T 2z67_A 206 VLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY----L 278 (456)
T ss_dssp EEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH----H
T ss_pred eccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh----h
Confidence 32 345789999999999 420 124667778999999999966 4566677999999999999998876420 0
Q ss_pred hHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+..........+ +++.|++|.++ .+.++||+ ++.+++
T Consensus 279 ~~~~~~~~~~~D-~~~~s~hK~~~-~p~g~G~l--~~~~~~ 315 (456)
T 2z67_A 279 EKLKKAFKYRVD-AVVSSSDKNLL-TPIGGGLV--YSTDAE 315 (456)
T ss_dssp HHHHHHHTSCCS-EEEEEHHHHHC-CCSSCEEE--EESCHH
T ss_pred HHHHHhhCCCCC-EEEEcCCCCcC-CCCCeEEE--EEcCHH
Confidence 111111111333 56789999764 67999999 776666
No 204
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.69 E-value=3.6e-16 Score=149.59 Aligned_cols=150 Identities=14% Similarity=0.110 Sum_probs=115.9
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH------
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER------ 173 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~------ 173 (363)
+.+.+.+.+++.+.+.. ..|.+..+..++++++++++.. +++++ +.+|++|+.++ +..+
T Consensus 11 ~~~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~sGt~a~~~a--l~~~~~~~~~ 75 (390)
T 3b8x_A 11 STWDDLEYKAIQSVLDS---KMFTMGEYVKQYETQFAKTFGS--------KYAVM--VSSGSTANLLM--IAALFFTKKP 75 (390)
T ss_dssp CCCCHHHHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH--HHHTTSSSSC
T ss_pred CCCCHHHHHHHHHHHHc---CCCCCChHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHH--HHHHHhhhhc
Confidence 45667777777766644 2466778899999999999743 24544 78888998887 4444
Q ss_pred -hCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHH
Q 017967 174 -YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 252 (363)
Q Consensus 174 -~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~ 252 (363)
+.+||+|+++.|+|..+...++..|++++.+++++ +++.+|++.+++.+++ ++++++++| ++|.. .+++
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~---~~~~v~~~~---~~g~~---~~~~ 145 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDI-NTLNIDIESLKEAVTD---STKAILTVN---LLGNP---NNFD 145 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHCCT---TEEEEEEEC---GGGCC---CCHH
T ss_pred CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCc-cccCcCHHHHHHHhCc---CCeEEEEEC---CccCh---hhHH
Confidence 56899999999999999999999999999999853 3588999999998863 455666654 34433 4677
Q ss_pred HHHHHHHhcCCeEEEecCCCCC
Q 017967 253 KIADVIQEKNHIPFFDVAYQGF 274 (363)
Q Consensus 253 ~i~~~~~~~~~~ii~De~y~~~ 274 (363)
+|.++|+++|+++|+|++|...
T Consensus 146 ~i~~l~~~~~~~li~D~a~~~g 167 (390)
T 3b8x_A 146 EINKIIGGRDIILLEDNCESMG 167 (390)
T ss_dssp HHHHHHTTSCCEEEEECTTCTT
T ss_pred HHHHHHHHcCCEEEEECcCccc
Confidence 8888899999999999999843
No 205
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.68 E-value=1.5e-16 Score=157.03 Aligned_cols=208 Identities=13% Similarity=0.084 Sum_probs=133.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCC------CCCCcchHHHHHHHHHHHhcCCCCcccC--CcEEEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE------YLPIEGLAAFNKVTAELLFGADNSVLKE--QRVATV 155 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~G~~~lr~aia~~l~~~~~~~~~~--~~i~~~ 155 (363)
+.|+|..+++ ++++.+.+++...+......+ |....+..++++.+.+++....+...++ .+|.+
T Consensus 45 ~~i~L~a~e~-------~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~- 116 (483)
T 1rv3_A 45 VGLELIASEN-------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP- 116 (483)
T ss_dssp SSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC-
T ss_pred cCeEEEcCCC-------CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEE-
Confidence 6899976653 357788888766654322112 3333455677766666555545543222 23555
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH--------HhhCC--CCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI--------FNDAR--VPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--------~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
++|+ +++..+ +..++.|||+|++++|.|..+... ++..| +++++++++ ++++.+|++.|++.+++
T Consensus 117 -~sGs-~an~~~--~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~-~~~~~iD~d~le~~i~~ 191 (483)
T 1rv3_A 117 -YSGS-PANFAV--YTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVN-PDTGYIDYDRLEENARL 191 (483)
T ss_dssp -SSHH-HHHHHH--HHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBC-TTTCSBCHHHHHHHHHH
T ss_pred -CCcH-HHHHHH--HHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccc-cCCCcCCHHHHHHHHhh
Confidence 6666 776665 455678999999999998877532 22233 334444443 34688999999999973
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCcc
Q 017967 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (363)
Q Consensus 226 ~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 304 (363)
.+++++++ +++||+ .+++ +++|.++|+++|+++|+|++|. ++...+... .++ . ...+++.|++|
T Consensus 192 --~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~--~p~----~--~~div~~s~~K 256 (483)
T 1rv3_A 192 --FHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVP--SPF----E--HCHVVTTTTHK 256 (483)
T ss_dssp --HCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSC--CGG----G--TCSEEEEESSG
T ss_pred --cCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCC--CCC----C--CCcEEEecCcc
Confidence 13456666 889998 7776 6677788999999999999975 333222111 111 1 12378899999
Q ss_pred ccccccccceEEEEeeCCh
Q 017967 305 NLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 305 ~~~l~G~RvG~i~~v~~~~ 323 (363)
.+ +|+|.||+ +++++
T Consensus 257 ~l--~GprgG~i--~~~~~ 271 (483)
T 1rv3_A 257 TL--RGCRAGMI--FYRRG 271 (483)
T ss_dssp GG--CCCSCEEE--EEECS
T ss_pred cC--CCCCceEE--EEcch
Confidence 87 59999999 66643
No 206
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.68 E-value=5e-16 Score=153.76 Aligned_cols=238 Identities=11% Similarity=0.017 Sum_probs=155.6
Q ss_pred hhhHHHHHhcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC
Q 017967 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (363)
..++.+.+...--++.++...-.|.+....+..++.+.+++...........|....+..++.+.+.+++....+.+ ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~ 158 (497)
T 2qma_A 80 LKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EK 158 (497)
T ss_dssp HHHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CC
Confidence 34444444332223444444444555455566677776665443322222445555566777777666655544442 13
Q ss_pred CcEEEEeccchhHHHHHHHHHHH--Hh---------CC------CC-EEEEcCCCCcchHHHHhhCCC---CeEEEeccc
Q 017967 150 QRVATVQGLSGTGSLRLAAALIE--RY---------FP------GA-KVLISSPTWGNHKNIFNDARV---PWSEYRYYD 208 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~--~~---------~~------gd-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~ 208 (363)
+++++ |.||++|+.++....+ .+ .+ |+ .|+++.+.|..+...++..|. +++.+|++
T Consensus 159 ~~~~~--t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~- 235 (497)
T 2qma_A 159 ADGIF--TSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN- 235 (497)
T ss_dssp CEEEE--ESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC-
T ss_pred CCeEE--cCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC-
Confidence 67877 9999999988754321 11 12 46 799999999999888888876 79999984
Q ss_pred CCCCCCCHHHHHHHHHcCC---CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhH
Q 017967 209 PKTVGLDFEGMIADIKAAP---GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 285 (363)
Q Consensus 209 ~~~~~~d~~~l~~~l~~~~---~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (363)
+++.+|++.|++.+.+.. .++.++++++++||||...+ +++|.++|+++|+++++|++|.++.... +...
T Consensus 236 -~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~---~~~~ 308 (497)
T 2qma_A 236 -ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILS---SHKS 308 (497)
T ss_dssp -TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGS---TTGG
T ss_pred -CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhC---cchH
Confidence 468899999999997521 12447777889999999655 6677788999999999999998876532 1110
Q ss_pred -HHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 286 -VRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 286 -~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
... ++ ..+ +++.|++|.++.| .++|++ ++.++.
T Consensus 309 ~~~g-i~-~~D-~i~~s~hK~l~~p-~~~G~l--~~~~~~ 342 (497)
T 2qma_A 309 RLKG-VE-RAH-SISVDFHKLFYQT-ISCGAL--LVNDKS 342 (497)
T ss_dssp GGTT-GG-GCS-EEEEETTTTTCCC-SSCEEE--EESCGG
T ss_pred hhcC-cc-cCC-EEEEcchhccCCC-cceEEE--EEeCHH
Confidence 000 11 122 5677899988855 799999 777665
No 207
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.68 E-value=1.5e-16 Score=155.34 Aligned_cols=203 Identities=18% Similarity=0.186 Sum_probs=127.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCC---cchHHHH-------HHHHHHHhcCCCCcccCCcEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI---EGLAAFN-------KVTAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---~G~~~lr-------~aia~~l~~~~~~~~~~~~i~ 153 (363)
+.|+|..+.+ +.++.+.+++.+.+......+|+.. .|...++ +.+++++ +.. ...
T Consensus 46 ~~i~l~~~~~-------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~----g~~---~~~- 110 (447)
T 3h7f_A 46 DTLEMIASEN-------FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALF----GAE---FAN- 110 (447)
T ss_dssp HSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----TCS---EEE-
T ss_pred CceeEecCCC-------CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHc----CCC---ceE-
Confidence 5788864432 2377888877655532222233221 2333222 4555554 221 122
Q ss_pred EEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH-H--HHhh--CCCCeEEEecccCCCCCCCHHHHHHHHHcCCC
Q 017967 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-N--IFND--ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~-~--~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (363)
+++.+|++|+..+ +...+.|||+|++++|+|..+. . .... .+..++.++++ ++++.+|++.+++++.. .
T Consensus 111 -v~~~sGs~a~~~a--~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~--~ 184 (447)
T 3h7f_A 111 -VQPHSGAQANAAV--LHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVD-PATHLIDMDAVRATALE--F 184 (447)
T ss_dssp -CCCSSHHHHHHHH--HHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCC-TTTCSCCHHHHHHHHHH--H
T ss_pred -EEeCCHHHHHHHH--HHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcC-cccCCcCHHHHHHHHHh--c
Confidence 2267888898777 4555789999999999987732 1 1112 33455666663 34578999999999864 2
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC-CCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccc
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 307 (363)
+++++++++|+||++. ++++|.++|+++|+++|+||+|. ++.+.+.... . .+ ...+++.|+||.++
T Consensus 185 ~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~--~----~~--~~di~~~s~sK~l~ 251 (447)
T 3h7f_A 185 RPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS--P----VP--HADVVSTTVHKTLG 251 (447)
T ss_dssp CCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC--S----TT--TCSEEEEESSGGGC
T ss_pred CCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC--C----CC--CCcEEEecCCcCCC
Confidence 3457777899999986 67888899999999999999963 3332211010 0 11 12377999999874
Q ss_pred cccccceEEEEeeCChhH
Q 017967 308 LYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 308 l~G~RvG~i~~v~~~~~~ 325 (363)
|+|.||+ +++ ++.
T Consensus 252 --G~~gG~i--~~~-~~~ 264 (447)
T 3h7f_A 252 --GGRSGLI--VGK-QQY 264 (447)
T ss_dssp --CCSCEEE--EEC-GGG
T ss_pred --CCCeEEE--EEC-HHH
Confidence 8999999 665 563
No 208
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.68 E-value=9.9e-16 Score=152.17 Aligned_cols=207 Identities=12% Similarity=-0.017 Sum_probs=150.5
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh--------
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-------- 174 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-------- 174 (363)
+..+.+.+........ ..|....+..++++++++++.+..|.+..++.+++ |.|||+|+..+.......
T Consensus 109 ~~~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~~~~ 185 (511)
T 3vp6_A 109 IGLAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTK 185 (511)
T ss_dssp HHHHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTHHHHH
T ss_pred HHHHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEE--CCchHHHHHHHHHHHHHHhhhhhhhc
Confidence 3344555555554433 67888889999999999998777666555567877 999999987763322211
Q ss_pred ----CCCCEEEEcCCCCcchHHHHhhCCC---CeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCC
Q 017967 175 ----FPGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGI 244 (363)
Q Consensus 175 ----~~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~ 244 (363)
.+++.|+++.+.|..+...++..|+ +++.++.+ .++.+|++.|++++++. ...+++++++.++||||.
T Consensus 186 G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~ 263 (511)
T 3vp6_A 186 GMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGA 263 (511)
T ss_dssp CGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCC
T ss_pred CcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcc
Confidence 1567899999999999999999998 89999984 46899999999999752 112678888999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 245 ~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+ +++++|+++|+++|+++++|++|........+. ...+.. .. .-.+++.+++|.++.| ...|++ +..+++
T Consensus 264 v---d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~-~~~~~g-~~--~aDsv~~~~hK~l~~p-~g~g~l--~~~~~~ 333 (511)
T 3vp6_A 264 F---DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKH-RHKLNG-IE--RANSVTWNPHKMMGVL-LQCSAI--LVKEKG 333 (511)
T ss_dssp B---CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTT-GGGGTT-GG--GCSEEEECTTSTTCCC-SCCEEE--EESSTT
T ss_pred c---ccHHHHHHHHHHcCCEEEEEccchhhHhhChhh-hhhccC-Cc--cCCEEEECcccccCCC-cCeEEE--EEeCHH
Confidence 8 457788888999999999999998765422110 001000 01 1234567999999855 678988 777766
No 209
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.67 E-value=4.5e-16 Score=153.57 Aligned_cols=208 Identities=9% Similarity=-0.090 Sum_probs=146.9
Q ss_pred ccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCccc-------CCcEEEEeccchhHHHHHHHHHHHHh
Q 017967 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-------EQRVATVQGLSGTGSLRLAAALIERY 174 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-------~~~i~~~~t~ggt~al~l~~~l~~~~ 174 (363)
.+..+.+.+........ ..|....+..++++++++++....|.+.+ ...+++ |.|||+|+.++.......
T Consensus 86 ~~~~~~~~~~~~~n~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~--t~ggTeA~~~al~~~~~~ 162 (486)
T 1js3_A 86 YPAMLADMLCGAIGCIG-FSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI--QGSASEATLVALLAARTK 162 (486)
T ss_dssp HHHHHHHHHHHHHCCCC-SSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE--ESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCc-cccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEE--cCCcHHHHHHHHHHHHHH
Confidence 44566676666664433 56766777889999998888766665432 245666 999999987773322111
Q ss_pred -CC------CC----------EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcEEEE
Q 017967 175 -FP------GA----------KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILL 234 (363)
Q Consensus 175 -~~------gd----------~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~ 234 (363)
.+ || .|+++.++|..+...++..|++++.+|++ +++.+|++.|++++++.. ..+.+++
T Consensus 163 ~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv 240 (486)
T 1js3_A 163 VVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVV 240 (486)
T ss_dssp HHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEE
Confidence 01 43 38889999999999999999999999983 478899999999997521 1135788
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccce
Q 017967 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 235 i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG 314 (363)
+++|+||||.+ +++++|+++|+++|+++++|++|.++..... +......-+. ..+. ++.+++|.++.| +++|
T Consensus 241 ~~~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~--~~~~~~~g~~-~ads-i~~~~hK~~~~p-~~~G 312 (486)
T 1js3_A 241 ATLGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICP--EFRHLLNGVE-FADS-FNFNPHKWLLVN-FDCS 312 (486)
T ss_dssp EEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGST--TTGGGGTTGG-GCSE-EEECHHHHSSCC-SSCE
T ss_pred EeCCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCH--HHHHHhcCcc-ccCe-eEEchhhhcCCC-cceE
Confidence 89999999977 5677788889999999999999987654211 1111100011 2233 457889999865 8999
Q ss_pred EEEEeeCChh
Q 017967 315 AMNVVCSSSD 324 (363)
Q Consensus 315 ~i~~v~~~~~ 324 (363)
|+ ++.++.
T Consensus 313 ~l--~~~~~~ 320 (486)
T 1js3_A 313 AM--WVKRRT 320 (486)
T ss_dssp EE--EESCHH
T ss_pred EE--EEeCHH
Confidence 99 777665
No 210
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.67 E-value=1.3e-15 Score=150.97 Aligned_cols=202 Identities=12% Similarity=-0.025 Sum_probs=141.3
Q ss_pred HHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh------CCC----
Q 017967 108 KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------FPG---- 177 (363)
Q Consensus 108 ~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~------~~g---- 177 (363)
+.+........ ..|....+..++.+.+.+++....+.+.+++++++ |.|||+|+.++...+... .+|
T Consensus 111 ~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~--t~ggtea~~~al~~~~~~~~~~~~~~G~~~~ 187 (504)
T 2okj_A 111 EWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTKGMAAV 187 (504)
T ss_dssp HHHHHHHCCBS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHHHCGGGS
T ss_pred HHHHHhhccCC-CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEE--eCCcHHHHHHHHHHHHHHHhhHHhhcCcccc
Confidence 44444333322 45666667677777776665544444333567877 999999998874443211 146
Q ss_pred -C-EEEEcCCCCcchHHHHhhCCC---CeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHH
Q 017967 178 -A-KVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPE 249 (363)
Q Consensus 178 -d-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~ 249 (363)
+ .|+++.+.|..+...++..|. +++.+|++ +++.+|++.|++++.+. ..+++++++++|+||||.+.+
T Consensus 188 ~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~-- 263 (504)
T 2okj_A 188 PKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP-- 263 (504)
T ss_dssp CCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC--
T ss_pred CCeEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC--
Confidence 6 799999999999999988877 89999984 46889999999998741 114678888999999999865
Q ss_pred HHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 250 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 250 ~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
+++|.++|+++|+++++|++|.++.....+. ...+.. +. ..+ +++.|++|.++.| .++|++ ++.+++
T Consensus 264 -l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~-~~~~~g-~~-~~D-~i~~~~hK~~~~p-~~~g~l--~~~~~~ 330 (504)
T 2okj_A 264 -IQEIADICEKYNLWLHVDAAWGGGLLMSRKH-RHKLNG-IE-RAN-SVTWNPHKMMGVL-LQCSAI--LVKEKG 330 (504)
T ss_dssp -HHHHHHHHHHHTCEEEEEETTGGGGGGCTTT-GGGGTT-GG-GCS-EEEECTTSTTCCC-SCCEEE--EESSTT
T ss_pred -HHHHHHHHHHcCCEEEEehhhhhHHHhCHhh-HhhcCC-cc-cCC-EEEECchhhcCCC-cceEEE--EEECHH
Confidence 6677788999999999999998887532110 011110 11 223 5677899999855 789999 777665
No 211
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.67 E-value=5.4e-16 Score=149.29 Aligned_cols=189 Identities=16% Similarity=0.165 Sum_probs=112.6
Q ss_pred ccHHHHHHHHHHHccCCCCCCC------CCcchHHHH----HHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHH
Q 017967 102 VLDVVKKAENLMLERGENKEYL------PIEGLAAFN----KVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALI 171 (363)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~lr----~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~ 171 (363)
.++.+.+++.+.+......+|+ .......+. +.+++++.. ++++|++ +. |++++.++ +.
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~------~~~~v~~--~s-Gs~a~~~a--~~ 110 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA------DYANVQP--HS-GSQANFAV--YT 110 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC------SEEECCC--SS-HHHHHHHH--HH
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC------CCceeEe--cC-cHHHHHHH--HH
Confidence 4677888876655322111221 122222233 455555422 2455544 44 58888877 45
Q ss_pred HHhCCCCEEEEcCCCCcchH---HHHhhCC--CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCC
Q 017967 172 ERYFPGAKVLISSPTWGNHK---NIFNDAR--VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP 246 (363)
Q Consensus 172 ~~~~~gd~Vlv~~P~y~~~~---~~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~ 246 (363)
..+.+||+|+++.|+|..+. ......| +..+.++.+ .++.+|++.+++++++. +++++++++|+||+ ..
T Consensus 111 ~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~--~~~~v~~~~~~~~~--~~ 184 (420)
T 3gbx_A 111 ALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH--KPKMIIGGFSAYSG--VV 184 (420)
T ss_dssp HHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH--CCSEEEECCTTCCS--CC
T ss_pred HhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc--CCeEEEEecCccCC--cc
Confidence 55779999999999998743 2222233 344555553 56789999999999852 35577778899985 34
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCC-CcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~ 322 (363)
+ +++|.++|+++|+++|+||+|.. +...+. .... .. ...+++.||||.++ |.|.||+ ++++
T Consensus 185 ~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~---~~~~---~~--~~di~~~s~sK~~~--g~~gg~~--~~~~ 246 (420)
T 3gbx_A 185 D---WAKMREIADSIGAYLFVDMAHVAGLIAAGV---YPNP---VP--HAHVVTTTTHKTLA--GPRGGLI--LAKG 246 (420)
T ss_dssp C---HHHHHHHHHHTTCEEEEECTTTHHHHHTTS---SCCS---TT--TSSEEEEESSGGGC--SCSCEEE--EESS
T ss_pred C---HHHHHHHHHHcCCEEEEECCcchhceeccc---CCcc---cc--cCCEEEeecccCCC--CCCceEE--EEcC
Confidence 3 77888899999999999999743 222111 0000 11 23488999999885 6777999 7765
No 212
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.65 E-value=1.9e-16 Score=154.70 Aligned_cols=170 Identities=11% Similarity=0.002 Sum_probs=118.8
Q ss_pred CCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCe
Q 017967 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW 201 (363)
Q Consensus 122 Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 201 (363)
|.+.....++++.+++ +.. .+++++ |+|+++++.++ +...+.+||+|+++.|+|..+...+...|+++
T Consensus 53 ~~~~~~~~~~~~~la~-~g~-------~~~v~~--~~G~t~a~~~~--~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~ 120 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-HSD-------YDGYFL--VNGTTSGILSV--IQSFSQKKGDILMARNVHKSVLHALDISQQEG 120 (446)
T ss_dssp TSCSSHHHHHHHHHCS-CTT-------EEEEEE--SSHHHHHHHHH--HHTTTTSSSCEEECTTCCHHHHHHHHHHTCCE
T ss_pred cCcchHHHHHHHHHHh-cCC-------CceEEE--eCCHHHHHHHH--HHHhcCCCCEEEEecCccHHHHHHHHHcCCeE
Confidence 4456667788888887 422 256766 99999999888 44456799999999999999999999999999
Q ss_pred EEEecccCCC----CCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCC-CcC
Q 017967 202 SEYRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FAS 276 (363)
Q Consensus 202 ~~v~~~~~~~----~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~-~~~ 276 (363)
+.++...+++ +++|++.+ +. ++++++++++ +|+||.+++ +++|+++|+++|+++|+||+|.. +.+
T Consensus 121 ~~v~~~~~~~~~~~~~~d~~~l---~~---~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f 190 (446)
T 2x3l_A 121 HFIETHQSPLTNHYNKVNLSRL---NN---DGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGL 190 (446)
T ss_dssp EECEEEECTTTSSEEEEEC-------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTS
T ss_pred EEEeCeeccccCcCCCCCHHHH---cC---CCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhcc
Confidence 9998732223 46788877 22 2355666677 566999988 56778889999999999999986 334
Q ss_pred CCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 277 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
.+. ..+. ...+ ..+++.|+||.++ ++.++||+ +++++
T Consensus 191 ~~~---~~~~---~~~g-~Di~~~S~~K~l~-~~~g~g~l--~~~~~ 227 (446)
T 2x3l_A 191 QGF---PDST---LNYQ-ADYVVQSFHKTLP-ALTMGSVL--YIHKN 227 (446)
T ss_dssp TTS---CCCG---GGGT-CSEEEECHHHHSS-SCTTCEEE--EEETT
T ss_pred CCC---CCCh---HHcC-CCEEEECCccccc-cccccEEE--EEcCC
Confidence 321 1111 1122 2388999999654 34568999 66543
No 213
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.45 E-value=1.4e-17 Score=163.11 Aligned_cols=243 Identities=15% Similarity=0.039 Sum_probs=150.9
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+.+++ .+||+..|.+...-|+ -.+.+.+++.+.+.......| +.....+|.+.+++++. ..+++.+ +
T Consensus 96 D~dG~-~yiD~~~~~~~~~lGh--~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~p-------~~~~v~~--~ 162 (465)
T 2yky_A 96 DVDGH-AYVNFLGEYTAGLFGH--SHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRFP-------SIDLVRF--T 162 (465)
Confidence 44444 7899887765322222 234555555444433222334 44455677777777742 1367877 9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCC--CeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
++|++|++.+..+...+..+++|++.+++|.++...+. ..|+ .++.+|. -|++.+++.+++.+++++
T Consensus 163 nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~a 235 (465)
T 2yky_A 163 NSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCA 235 (465)
Confidence 99999999885543333455999999999977654332 2233 2233332 368889888874323455
Q ss_pred EEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 232 ILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
++++...+|+||... +.+.+++|.++|+++|+++|+||+|. +..+. ......+ ....-+.+|||.+| .|
T Consensus 236 avi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~----~~a~~~~----gv~pDi~t~sK~lg-~G 305 (465)
T 2yky_A 236 AILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG----GGAQEML----GISADLTTLGKYIG-GG 305 (465)
Confidence 555444356699654 68889999999999999999999999 74331 1111111 11122458999999 59
Q ss_pred ccceEEEEeeCChhHHHHHHHHHHh-----hhccccCCCchHHHHHHhcccc
Q 017967 311 ERIGAMNVVCSSSDLAARVKSQLKR-----LARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 311 ~RvG~i~~v~~~~~~~~~~~~~l~~-----~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
+|+||+ +++ ++ +++.+.. ......++.++++|.++...|+
T Consensus 306 ~piG~v--~~~-~~----i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~ 350 (465)
T 2yky_A 306 MSFGAF--GGR-RD----LMERFDPARDGAFAHAGTFNNNILTMSAGHAALT 350 (465)
Confidence 999999 665 55 4444443 1223445677888887766554
No 214
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.63 E-value=1.2e-14 Score=144.16 Aligned_cols=205 Identities=12% Similarity=0.044 Sum_probs=144.7
Q ss_pred ccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcE-EEEeccchhHHHHHHHHHHHHhCC--
Q 017967 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV-ATVQGLSGTGSLRLAAALIERYFP-- 176 (363)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i-~~~~t~ggt~al~l~~~l~~~~~~-- 176 (363)
.++.+.+.+++...+.... ..|....+..++++.+.+++....+.+.+++++ ..+.|.||++++.++. +....+
T Consensus 66 ~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~--~a~~~~~~ 142 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAG--LAFKRKWQ 142 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHH--HHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHH--HHHHHHHh
Confidence 4456778888776654322 334455567777777777766666655333333 3334889999988773 333323
Q ss_pred ------CC-----EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC
Q 017967 177 ------GA-----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (363)
Q Consensus 177 ------gd-----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~ 245 (363)
|+ .|+++.++|..+...++..|++++.+|++ ++++.+|++.+++++.+ ++.++++++|+||||.+
T Consensus 143 ~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~ 218 (502)
T 3hbx_A 143 NKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPQQAVDMVDE---NTICVAAILGSTLNGEF 218 (502)
T ss_dssp HHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCB-TTBCSCCHHHHHHHCCT---TEEEEEEEBSCTTTCCB
T ss_pred HHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecC-CCcCcCCHHHHHHHHhh---CCEEEEEecCCCCCCcc
Confidence 76 89999999999999999999999999985 34488999999999873 56788889999999999
Q ss_pred CCHHHHHHHHHHHHhc------CCeEEEecCCCCCc----CCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceE
Q 017967 246 PTPEQWEKIADVIQEK------NHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 315 (363)
Q Consensus 246 ~s~~~~~~i~~~~~~~------~~~ii~De~y~~~~----~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~ 315 (363)
.+.+ +|.++|+++ |+++++|++|.++. ..... .. .....-.++..|..|.++ .+.++||
T Consensus 219 ~~l~---~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~---~~----~~~~~~D~v~~s~hK~l~-~p~g~G~ 287 (502)
T 3hbx_A 219 EDVK---LLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELE---WD----FRLPLVKSINVSGHKYGL-VYAGIGW 287 (502)
T ss_dssp CCHH---HHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC---CS----TTSTTEEEEEEETTTTTC-CCSSCEE
T ss_pred cCHH---HHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccc---cc----cCCCCceEEEECcccccC-CCCCeEE
Confidence 7655 566668888 99999999998664 22110 00 011133456678899764 7888999
Q ss_pred EEEeeCChh
Q 017967 316 MNVVCSSSD 324 (363)
Q Consensus 316 i~~v~~~~~ 324 (363)
+ ++.+++
T Consensus 288 ~--~~~~~~ 294 (502)
T 3hbx_A 288 V--IWRNKE 294 (502)
T ss_dssp E--EESSGG
T ss_pred E--EEeCHH
Confidence 9 666554
No 215
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.62 E-value=1.2e-14 Score=144.43 Aligned_cols=188 Identities=15% Similarity=-0.011 Sum_probs=132.5
Q ss_pred CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHH-----hC-CCC------EEEEcCCCC
Q 017967 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-----YF-PGA------KVLISSPTW 187 (363)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~-----~~-~gd------~Vlv~~P~y 187 (363)
..|....+..++.+.+.+++....|.+ ++++++ |.|||+|+.++...... +. +|| .|+++.+.|
T Consensus 138 ~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~--t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h 213 (515)
T 2jis_A 138 YTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIF--CPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECH 213 (515)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSC
T ss_pred CchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEE--cCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCcc
Confidence 456666665555555444443333332 578877 99999998777433221 12 575 899999999
Q ss_pred cchHHHHhhCCC---CeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc
Q 017967 188 GNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (363)
Q Consensus 188 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~ 261 (363)
+.+...++..|. +++.+|++ +++.+|++.|++++.+. ..+++++++++|+||||.+.+ +++|.++|+++
T Consensus 214 ~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~ 288 (515)
T 2jis_A 214 YSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRH 288 (515)
T ss_dssp THHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHc
Confidence 999999998888 89999984 46889999999999741 124678888999999999876 56777889999
Q ss_pred CCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCCh
Q 017967 262 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (363)
Q Consensus 262 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~ 323 (363)
|+++++|++|..+...... ... .+.......+++.|++|.++. +.++|++ ++.++
T Consensus 289 g~~l~vD~a~~~~~~~~~~--~~~--~~~g~~~aD~v~~s~hK~l~~-p~g~G~l--~~~~~ 343 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLLSQT--HRH--LLDGIQRADSVAWNPHKLLAA-GLQCSAL--LLQDT 343 (515)
T ss_dssp TCEEEEEETTGGGGGGCTT--TGG--GGTTGGGCSEEEECTTSTTCC-CSCCEEE--EESCC
T ss_pred CCeEEEehhhhhHHHhChh--hHh--hcCCCccCCEEEECcccccCC-CCCeeEE--EEeCh
Confidence 9999999999887654211 110 010111224778899999874 4679999 77766
No 216
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.61 E-value=3.7e-15 Score=154.20 Aligned_cols=171 Identities=13% Similarity=0.081 Sum_probs=121.1
Q ss_pred chHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
-..++++.+++++.. .+.+++ ++|+++++.++ +...+.|||.|+++.|+|..+...+...|++++.++.
T Consensus 206 ~v~~~ee~la~l~G~-------d~~i~~--~~Gtt~a~~~~--i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~ 274 (755)
T 2vyc_A 206 AFGESEKYAARVFGA-------DRSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVP 274 (755)
T ss_dssp HHHHHHHHHHHHHTC-------SEEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECC
T ss_pred HHHHHHHHHHHHhCC-------CceEEE--CCcHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeC
Confidence 456777777777532 234555 88888998887 5566789999999999999998888889999999987
Q ss_pred ccCCCCC----C-----CHHHHHHHHHcCCCC-------cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 207 YDPKTVG----L-----DFEGMIADIKAAPGG-------SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 207 ~~~~~~~----~-----d~~~l~~~l~~~~~~-------~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.. ++++ + |++.+++++++.++. +++++++|| ||||.+.+ +++|+++|+++++++++||+
T Consensus 275 ~~-~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA 349 (755)
T 2vyc_A 275 SR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEA 349 (755)
T ss_dssp CB-CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECT
T ss_pred CC-CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECc
Confidence 42 2333 4 999999999763321 236667888 79999976 56677889999999999999
Q ss_pred CCCC-cCCCCCCchhHHHHH--Hh-cCCeEEEEEcCccccccccccceEE
Q 017967 271 YQGF-ASGSLDNDASSVRLF--AT-RGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 271 y~~~-~~~~~~~~~~~~~~~--~~-~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
|... .+++.-.+.... .. .+ ..++++++.|++|.+ +|++.|.+
T Consensus 350 ~~~~~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~ 396 (755)
T 2vyc_A 350 WYGYARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLL--NALSQASY 396 (755)
T ss_dssp TCTTGGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSS--SCCTTCEE
T ss_pred CchhcccCcccCCcchh-cCCcCCccCCCeEEEECccccc--cCcCCeee
Confidence 8754 222100000111 01 12 235788999999975 58885555
No 217
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.61 E-value=1.1e-14 Score=139.08 Aligned_cols=170 Identities=15% Similarity=0.128 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchH--HHHhhCCC--CeEEE
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK--NIFNDARV--PWSEY 204 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~--~~~~~~G~--~~~~v 204 (363)
.++++.+++++.. ++.+++ |.|||++++++. ..+.+||+|++.+++|..+. ..++..|+ +++.+
T Consensus 38 ~~~~~~l~~~~~~-------~~~v~~--~~sgt~a~~~~~---~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 105 (379)
T 3ke3_A 38 NDLLSNLKTVYNA-------EAAVII--PGSGTYGMEAVA---RQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHHTC-------SEEEEE--ESCHHHHHHHHH---HHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHHhCC-------CCEEEE--cCChhHHHHHHH---HhCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEE
Confidence 3556666666522 146666 899999999873 44679999999999997653 34555664 67777
Q ss_pred ecccC------CC-CCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 205 RYYDP------KT-VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 205 ~~~~~------~~-~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
+.+.. .. ..+|++.+++.+++ ++++++++++++||||..++.+++++|.++|+++|+++|+|+++. .
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~--g-- 179 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKE--DKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS--G-- 179 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHH--HTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC--T--
T ss_pred eccccccccccCCCCCCCHHHHHHHHhh--cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc--C--
Confidence 76321 01 25899999999963 134567778889999999999999999999999999999999965 2
Q ss_pred CCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHH
Q 017967 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~ 327 (363)
.. ...+..+ .-.+++.|++|.++ .+.++|++ ++. ++.++
T Consensus 180 ~~---~~~~~~~----~~d~~~~s~~K~l~-~~~g~g~~--~~~-~~~~~ 218 (379)
T 3ke3_A 180 CV---WLDMKEL----GIDVLISAPQKGWS-STPCAGLV--MLS-AAAIK 218 (379)
T ss_dssp TC---CCCHHHH----TCSEEEECTTTTTC-SCCCEEEE--EEC-HHHHH
T ss_pred Cc---ccccccc----CCCEEEecchhhcC-CCCceEEE--EEC-HHHHH
Confidence 11 1112111 23577889999886 34568998 654 66333
No 218
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.60 E-value=3.8e-15 Score=142.75 Aligned_cols=197 Identities=16% Similarity=0.163 Sum_probs=121.6
Q ss_pred cHHHHHHHHHHHccCCCCCCC------CCcchHHHH----HHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHH
Q 017967 103 LDVVKKAENLMLERGENKEYL------PIEGLAAFN----KVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 172 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~lr----~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~ 172 (363)
++.+.+++.+.+.......|. ......+++ +++++++... ++.+++ + +|++++.++ +..
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~------~~~i~~--~-sGt~a~~~a--~~~ 104 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAE------HANVQP--H-SGAQANMAV--YFT 104 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS------EEECCC--S-SHHHHHHHH--HHH
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceEEEe--c-CcHHHHHHH--HHH
Confidence 677888876655321111221 112234444 5788876321 333333 4 459999888 444
Q ss_pred HhCCCCEEEEcCCCCcchHH-H--HhhCC--CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCC
Q 017967 173 RYFPGAKVLISSPTWGNHKN-I--FNDAR--VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (363)
Q Consensus 173 ~~~~gd~Vlv~~P~y~~~~~-~--~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s 247 (363)
.+.+||.|+++.|+|..+.. . +...| ++++.++++ ++++.+|++.+++.+++. +++++++ +|+|+ |...
T Consensus 105 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~--~~~~v~~-~~~~~-~~~~- 178 (405)
T 2vi8_A 105 VLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVD-PETHVIDYDDVREKARLH--RPKLIVA-AAAAY-PRII- 178 (405)
T ss_dssp HCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBC-TTTCSBCHHHHHHHHHHH--CCSEEEE-CCSSC-CSCC-
T ss_pred hcCCCCEEEEecccccchhcccchhhhccceeEEEecccc-cccCCcCHHHHHHHHHhc--CCeEEEE-eCCCC-CccC-
Confidence 46799999999999987753 1 12333 366777663 246789999999999741 2345554 55554 3333
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCCCCCcC-CCCCCchhHHHHHHhcCCeEEEEEcCccccc-cccccceEEEEeeCChhH
Q 017967 248 PEQWEKIADVIQEKNHIPFFDVAYQGFAS-GSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDL 325 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-l~G~RvG~i~~v~~~~~~ 325 (363)
++++|.++|+++|+++|+||+|..... .+. .... ... ..++++||||.++ .+| ||+ +++ ++
T Consensus 179 --~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~----~~~--~di~~~s~sK~~~g~~g---G~~--~~~-~~- 241 (405)
T 2vi8_A 179 --DFAKFREIADEVGAYLMVDMAHIAGLVAAGL--HPNP----VPY--AHFVTTTTHKTLRGPRG---GMI--LCQ-EQ- 241 (405)
T ss_dssp --CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCS----TTT--CSEEEEESSSTTCCCSC---EEE--EEC-HH-
T ss_pred --CHHHHHHHHHHcCCEEEEEccccccccccCc--CCCc----ccc--CCEEEEeccccCCCCCC---eEE--EEc-HH-
Confidence 367888889999999999999983221 111 0111 111 2288999999997 566 999 665 66
Q ss_pred HHHHHHHHHhh
Q 017967 326 AARVKSQLKRL 336 (363)
Q Consensus 326 ~~~~~~~l~~~ 336 (363)
+++.+...
T Consensus 242 ---~~~~l~~~ 249 (405)
T 2vi8_A 242 ---FAKQIDKA 249 (405)
T ss_dssp ---HHHHHHHH
T ss_pred ---HHHHHHhh
Confidence 44444444
No 219
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.58 E-value=3.7e-15 Score=142.99 Aligned_cols=199 Identities=9% Similarity=-0.069 Sum_probs=120.0
Q ss_pred CCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCC-CCCCCC--cchHHHHHHHHHHHhcCCCCcccCCcEEEEeccc
Q 017967 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (363)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (363)
+..++++.|. ..+++.+.+++.+....... ..+.+. ....++|+.+++++. .. .+++|++ .|.|
T Consensus 39 ~~~~~~~~~~-------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~~-~~~~i~~-~t~g 105 (398)
T 2fyf_A 39 PRDGRFGSGP-------SKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFS----LP-DGYEVIL-GNGG 105 (398)
T ss_dssp CSSCBCCSSS-------CCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTT----CC-TTCEEEE-EETC
T ss_pred cCCccccCCC-------CCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEE-eCCc
Confidence 4566776443 34567777776542101110 123222 134677778887752 22 2346531 3899
Q ss_pred hhHHHHHHHHHHHHhCCCCEEEEcCCCCcc-hHHHHhhC--CCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEc
Q 017967 160 GTGSLRLAAALIERYFPGAKVLISSPTWGN-HKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (363)
Q Consensus 160 gt~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~ 236 (363)
|+++++++ +..++.+| .+.+..+.|.. +...+... |.+++.++++ ++...+. . +. +++++++++
T Consensus 106 ~t~al~~~--~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-~----i~---~~~~~v~~~ 172 (398)
T 2fyf_A 106 ATAFWDAA--AFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-Q----TD---PSVDVIAWA 172 (398)
T ss_dssp HHHHHHHH--HHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-C----CC---TTCSEEEEE
T ss_pred hhHHHHHH--HHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-c----cc---CCCCEEEEe
Confidence 99999988 44446676 23333333321 12234555 8899899874 2233332 1 22 345677778
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 237 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
+|+||||.+++.+++.++ +|+++|+|++|..+... .+ + .. ..+++.|+||.+|.+| ++||+
T Consensus 173 ~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~---~~---~----~~--~di~~~s~sK~~~~~g-g~g~l 233 (398)
T 2fyf_A 173 HNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP---VD---I----AE--TDAYYFAPQKNFASDG-GLWLA 233 (398)
T ss_dssp SEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC---CC---G----GG--CSEEEECTTSTTCSCS-SEEEE
T ss_pred CcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc---cC---c----cc--CcEEEEecCcccCCCC-ceEEE
Confidence 999999999998887765 89999999999876532 11 1 11 3478999999999775 69998
Q ss_pred EEeeCChhHHHHH
Q 017967 317 NVVCSSSDLAARV 329 (363)
Q Consensus 317 ~~v~~~~~~~~~~ 329 (363)
+++ ++.++++
T Consensus 234 --~~~-~~~~~~l 243 (398)
T 2fyf_A 234 --IMS-PAALSRI 243 (398)
T ss_dssp --EEC-HHHHHHH
T ss_pred --EEC-HHHHHHh
Confidence 665 6644443
No 220
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.57 E-value=6.7e-15 Score=151.18 Aligned_cols=175 Identities=11% Similarity=-0.021 Sum_probs=122.7
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCCCCeE
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS 202 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~~~ 202 (363)
+..-..++++.+|+++.. +..+++ ++|+++++.++ +..++.+||.|+++.|+|..+... ++..|++++
T Consensus 171 ~~~~i~e~e~~lA~~~ga-------e~~i~v--~nGtt~an~~a--i~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v 239 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNA-------DKTYFV--LGGSSNANNTV--TSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPV 239 (730)
T ss_dssp TBTHHHHHHHHHHHHTTC-------SEEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred ChHHHHHHHHHHHHHHCC-------CcEEEE--CCHHHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEE
Confidence 444568899999998633 234555 88888998877 556678999999999999988887 888999998
Q ss_pred EEecccCCCCC----CCHHHH-----HHHHHcCC-C-----Cc-EEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 203 EYRYYDPKTVG----LDFEGM-----IADIKAAP-G-----GS-FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 203 ~v~~~~~~~~~----~d~~~l-----~~~l~~~~-~-----~~-~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
.++... ++++ +|++.| ++++++.+ + ++ +++++++| ||||.+.+ +++|+++|++++++++
T Consensus 240 ~v~~~~-~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~li 314 (730)
T 1c4k_A 240 YLQTNR-NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIE 314 (730)
T ss_dssp EECEEE-CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEE
T ss_pred EEeCCc-cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEE
Confidence 887642 2333 688888 88886431 0 11 57777888 69999875 5677888999999999
Q ss_pred EecCCCCC-cCCCCCCchhHHHH--HHhcCCeEEEEEcCccccccccccceEE
Q 017967 267 FDVAYQGF-ASGSLDNDASSVRL--FATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 267 ~De~y~~~-~~~~~~~~~~~~~~--~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
+||+|... .+++.-+....+.. +....++++++.|+||.+ +|++.|.+
T Consensus 315 vDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~ 365 (730)
T 1c4k_A 315 FDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQ 365 (730)
T ss_dssp EECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEE
T ss_pred EEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEE
Confidence 99998753 33210000000100 000124679999999975 58887766
No 221
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.55 E-value=2.3e-14 Score=141.09 Aligned_cols=204 Identities=15% Similarity=0.156 Sum_probs=116.3
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCC---cch---HHHH----HHHHHHHhcCCCCcccCCcE-
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI---EGL---AAFN----KVTAELLFGADNSVLKEQRV- 152 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---~G~---~~lr----~aia~~l~~~~~~~~~~~~i- 152 (363)
+.|+|..++ .++++.|.+++...+......+|+.. .|. .++. +.+++++... .+.+
T Consensus 55 ~~i~lias~-------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~------~~~~~ 121 (490)
T 2a7v_A 55 RGLELIASE-------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLD------PAQWG 121 (490)
T ss_dssp HSEECCTTC-------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCC------TTTEE
T ss_pred cCceEECCC-------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCC------cccCc
Confidence 567877544 23578888887665533222233221 122 3455 5666664322 2222
Q ss_pred EEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH--------HHhhCCCC--eEEEecccCCCCCCCHHHHHHH
Q 017967 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN--------IFNDARVP--WSEYRYYDPKTVGLDFEGMIAD 222 (363)
Q Consensus 153 ~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~G~~--~~~v~~~~~~~~~~d~~~l~~~ 222 (363)
..+++.+|++|+.++ +..++.|||+|++.++.|.++.. .+...|.. ++.++++ ++++.+|++.+++.
T Consensus 122 ~~v~~~sGt~An~~a--l~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd-~~~~~iD~d~le~~ 198 (490)
T 2a7v_A 122 VNVQPYSGSPANLAV--YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN-PKTGLIDYNQLALT 198 (490)
T ss_dssp EECCCSSHHHHHHHH--HHHHCCSCEECCC-------------------------------CCBC-TTTCSBCHHHHHHH
T ss_pred eEEeCCchHHHHHHH--HHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccc-cccCCcCHHHHHHH
Confidence 223366889998777 66678899999999998865431 22344544 3444443 34678999999999
Q ss_pred HHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC-CCCcCCCCCCchhHHHHHHhcCCeEEEEEc
Q 017967 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQS 301 (363)
Q Consensus 223 l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 301 (363)
+.+. ++++++++.++||+. . ++++|.++|+++|+++++|+++ .++...+..+ .++ + + -.+++.|
T Consensus 199 l~~~--~~klIi~~~s~~~~~--~---dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~--~~~----~-~-aDiv~~S 263 (490)
T 2a7v_A 199 ARLF--RPRLIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKVIP--SPF----K-H-ADIVTTT 263 (490)
T ss_dssp HHHH--CCSEEEECCSSCCSC--C---CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC--CGG----G-T-CSEEEEE
T ss_pred Hhhc--CCcEEEEcCCCCCCc--c---cHHHHHHHHHHcCCEEEEccccccccccCCcCC--CCC----C-C-CCEEEEC
Confidence 8642 345777788999863 2 4778888899999999999994 3433222111 111 1 1 2377899
Q ss_pred CccccccccccceEEEEeeCC
Q 017967 302 YSKNLGLYAERIGAMNVVCSS 322 (363)
Q Consensus 302 ~SK~~~l~G~RvG~i~~v~~~ 322 (363)
++|.++ |.|.|++ ++++
T Consensus 264 ~hK~l~--Gp~GG~i--~~~~ 280 (490)
T 2a7v_A 264 THKTLR--GARSGLI--FYRK 280 (490)
T ss_dssp SSGGGC--SCSCEEE--EEEC
T ss_pred CcccCc--cccchhe--eecc
Confidence 999884 7888999 6664
No 222
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.51 E-value=1.3e-13 Score=135.90 Aligned_cols=206 Identities=8% Similarity=-0.109 Sum_probs=145.1
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC--------CcEEEEeccchhHHHHHHHHHHHHh
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE--------QRVATVQGLSGTGSLRLAAALIERY 174 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~--------~~i~~~~t~ggt~al~l~~~l~~~~ 174 (363)
+..+.+.+........ ..|....+..++++.+++++.+..+.+... ...++ |.|||+|+.++....+..
T Consensus 92 ~~~~~~~~~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~--~~ggt~an~~al~~ar~~ 168 (481)
T 4e1o_A 92 PSLLGDMLADAINCLG-FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVL--QSTVSESTLIALLAARKN 168 (481)
T ss_dssp HHHHHHHHHHHHCCCC-SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEE--ESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEE--eCchHHHHHHHHHHHHHH
Confidence 4455555555554433 678888899999999999887665554221 24555 899999987764322111
Q ss_pred -----------------CCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcEEEE
Q 017967 175 -----------------FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILL 234 (363)
Q Consensus 175 -----------------~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~ 234 (363)
.+++.|+++.++|..+...++..|++++.+|.+ +++.+|++.|++++++.. ..+++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv 246 (481)
T 4e1o_A 169 KILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVC 246 (481)
T ss_dssp HHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEE
Confidence 157899999999999999998899999999983 578999999999997521 1256777
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccc
Q 017967 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERI 313 (363)
Q Consensus 235 i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~Rv 313 (363)
.+.++|+||.+ +++++|+++|++||+++++|++|........ .. +..... ..-..+..+++|.++.| .-.
T Consensus 247 ~~~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~--~~---~~~~~gi~~aDsi~~~~hK~l~~p-~g~ 317 (481)
T 4e1o_A 247 ATLGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCP--EF---RGFLKGIEYADSFTFNPSKWMMVH-FDC 317 (481)
T ss_dssp EEBSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSG--GG---GGGGTTGGGCSEEEECHHHHSSCC-SSC
T ss_pred EecCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhCh--hh---HHHhcCcccCCEEEEChHHhcCCC-Cce
Confidence 78899999987 4577788889999999999999987643211 11 111110 01134567899988865 446
Q ss_pred eEEEEeeCChh
Q 017967 314 GAMNVVCSSSD 324 (363)
Q Consensus 314 G~i~~v~~~~~ 324 (363)
|++ +..++.
T Consensus 318 g~l--~~~~~~ 326 (481)
T 4e1o_A 318 TGF--WVKDKY 326 (481)
T ss_dssp EEE--EESBHH
T ss_pred EEE--EEeCHH
Confidence 777 666565
No 223
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.49 E-value=8.2e-14 Score=142.23 Aligned_cols=169 Identities=11% Similarity=0.072 Sum_probs=118.5
Q ss_pred CCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
+..-+.++++.+|+++... ..+++ ++|+++|+..+ +..++.|||.|+++.++|..+...+...|++++.
T Consensus 193 ~~g~i~eaE~~lA~~fGa~-------~a~~v--~nGts~An~~a--i~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~ 261 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNAD-------RSYMV--TNGTSTANKIV--GMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIY 261 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCS-------EEEEE--SSHHHHHHHHH--HHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEE
T ss_pred CcHHHHHHHHHHHHHhCCC-------CceEE--CcHHHHHHHHH--HHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEE
Confidence 4444678999999996442 34444 77778887666 5667889999999999999999999999999999
Q ss_pred EecccCCCCCC---------CHHHHHHHHHcCCCC--cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCC
Q 017967 204 YRYYDPKTVGL---------DFEGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (363)
Q Consensus 204 v~~~~~~~~~~---------d~~~l~~~l~~~~~~--~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~ 272 (363)
++... +++++ |++.+++++++.++. ++++++++| ||+|.+++.+++. ++|+++ .+++||+|.
T Consensus 262 v~~~~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~---ela~~~--~livDEAH~ 334 (715)
T 3n75_A 262 FRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIK---KTLDVK--SIHFDSAWV 334 (715)
T ss_dssp ECCCB-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHH---HHCCCS--EEEEECTTC
T ss_pred Eeccc-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHH---HHhCcC--cEEEccccc
Confidence 98642 34553 899999999865421 236777899 9999999766554 456655 378999997
Q ss_pred CCc-CCCCCCchhHHHHHHhc---CCe-EEEEEcCcccccccccc-ceEE
Q 017967 273 GFA-SGSLDNDASSVRLFATR---GME-LLVAQSYSKNLGLYAER-IGAM 316 (363)
Q Consensus 273 ~~~-~~~~~~~~~~~~~~~~~---~~~-vi~~~S~SK~~~l~G~R-vG~i 316 (363)
... +.+. .+.... +.. .+. +++++|++|.++ |+. .|++
T Consensus 335 ~~~~f~~~---~~~~~a-l~~g~~aD~vii~~~S~hKtL~--gltqgs~i 378 (715)
T 3n75_A 335 PYTNFSPI---YEGKCG-MSGGRVEGKVIYETQSTHKLLA--AFSQASMI 378 (715)
T ss_dssp TTGGGSGG---GTTSST-TSSSCCTTCEEEEEECHHHHSS--CCTTCEEE
T ss_pred cccccCCc---cccccc-cccCcCCCEEEEEEeccccccc--CCCCeeEE
Confidence 653 3311 100000 111 133 367999999975 663 4666
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.49 E-value=1.9e-13 Score=132.99 Aligned_cols=160 Identities=9% Similarity=-0.000 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCCeEE
Q 017967 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPWSE 203 (363)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~ 203 (363)
..++++.+++++.. +++++++ +.|++.+.+.+...+ .+.+||+|+++.|+|+.+...+ +..|++++.
T Consensus 110 ~~~~~~~la~~~g~------~~~~i~~--~~g~taa~ea~~~a~-~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 110 TFEYQTMIAELAGL------EIANASM--YDGATALAEGVLLAL-RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp HHHHHHHHHHHHTS------SEECSCB--SSHHHHHHHHHHHHH-HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCC------CccceEE--eCcHHHHHHHHHHHH-hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence 34666777777532 2456766 899995555442222 3468999999999999988665 458999999
Q ss_pred EecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCch
Q 017967 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (363)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (363)
++. +++.+|++. +. ++++++++++| ||||.+.+ +++|.++|+++|+++++|..-..+..-. .
T Consensus 181 v~~---~~~~~d~~~----i~---~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~~----~ 242 (438)
T 1wyu_A 181 LPL---EGGRTPLPE----VG---EEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVLK----P 242 (438)
T ss_dssp ECC---BTTBCCCCC----CC---TTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTBC----C
T ss_pred EcC---cCCccCHHH----hC---CCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCcC----C
Confidence 986 235677766 33 35778888999 99999984 6677788999999999663311121100 1
Q ss_pred hHHHHHHhcCCeEEEEEcCccc----cccccccceEEEEeeCChh
Q 017967 284 SSVRLFATRGMELLVAQSYSKN----LGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 284 ~~~~~~~~~~~~vi~~~S~SK~----~~l~G~RvG~i~~v~~~~~ 324 (363)
+ . ..+.+++ +.| +|. +++.|.|+||+ +++ ++
T Consensus 243 -~-~---~~g~D~~-~~s-~kk~~~~~~~~Gp~~G~l--~~~-~~ 277 (438)
T 1wyu_A 243 -P-G---AYGADIA-VGD-GQSLGLPMGFGGPHFGFL--ATK-KA 277 (438)
T ss_dssp -H-H---HHTCSEE-EEE-CTTTTCCCGGGCSCCEEE--EEC-GG
T ss_pred -C-c---cCCCCEE-EEC-CcccCCCccCCCCCeeEE--EEc-HH
Confidence 1 1 1223444 444 554 45678899999 665 44
No 225
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.48 E-value=7.9e-14 Score=137.10 Aligned_cols=249 Identities=11% Similarity=-0.029 Sum_probs=148.9
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHcc---CCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
.+||+..|.+...-|+ -.+.+.+++.+.... .....|+. ....++++++++.+...... ..++|++ ++||
T Consensus 64 ~ylD~~~g~~~~~lGh--~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~v~f--~~sG 136 (472)
T 1ohv_A 64 RMLDLYSQISSIPIGY--SHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQLIT--MACG 136 (472)
T ss_dssp EEEESSHHHHTCSSCB--TCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCEEEE--ESSH
T ss_pred EEEECCCCHhhcccCC--CCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCEEEE--eCCc
Confidence 7999988876433343 355666666543311 01112322 33568999999866553322 3578888 9999
Q ss_pred hHHHHHHHHHHHHh------C-----------------CC---CEEEEcCCCCcchHHHH-hhCCC--------Ce----
Q 017967 161 TGSLRLAAALIERY------F-----------------PG---AKVLISSPTWGNHKNIF-NDARV--------PW---- 201 (363)
Q Consensus 161 t~al~l~~~l~~~~------~-----------------~g---d~Vlv~~P~y~~~~~~~-~~~G~--------~~---- 201 (363)
++|++.+..+.... . || +.|++.+++|.++.... ...|. ..
T Consensus 137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (472)
T 1ohv_A 137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP 216 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCC
T ss_pred hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCc
Confidence 99999986654311 1 46 89999999998875543 22222 11
Q ss_pred -EEEecccCC---C--C-----CCCHHHHHHHHHcCCC---CcEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHhcCCeEE
Q 017967 202 -SEYRYYDPK---T--V-----GLDFEGMIADIKAAPG---GSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 202 -~~v~~~~~~---~--~-----~~d~~~l~~~l~~~~~---~~~~~~i~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii 266 (363)
+.+|.+... . + ..|++.|++.+++... +++++++...+|+||. ..+.+.+++|.++|+++|+++|
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli 296 (472)
T 1ohv_A 217 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL 296 (472)
T ss_dssp EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 122211000 0 0 1267889888874211 4667776666888996 5689999999999999999999
Q ss_pred EecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCch
Q 017967 267 FDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPP 346 (363)
Q Consensus 267 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~ 346 (363)
+||+|.+|...+. ...+..+ ... ...-+.+|||.+ +.| ||+ + + ++ +. .+.........+.++
T Consensus 297 ~DEv~~g~g~~g~---~~~~~~~-gv~-~~~Di~t~sK~~-l~G---G~~--~-~-~~----~~-~~~~~~~~~T~~~~~ 358 (472)
T 1ohv_A 297 VDEVQTGGGSTGK---FWAHEHW-GLD-DPADVMTFSKKM-MTG---GFF--H-K-EE----FR-PNAPYRIFNTWLGDP 358 (472)
T ss_dssp EECTTTTTTTTSS---SSGGGGG-CCS-SCCSEEEECGGG-SSE---EEE--E-C-GG----GS-CSSSSSSCCSSSSCH
T ss_pred EeCcccCCCCCCC---chhcccc-CCC-CCCCEEEEcccc-ccC---Ccc--C-c-hh----hc-ccccccccCccCccH
Confidence 9999988765421 1122111 110 002234899995 345 777 4 3 44 21 122222233346678
Q ss_pred HHHHHHhcccc
Q 017967 347 MLLGIQLSSMN 357 (363)
Q Consensus 347 ~~q~~~~~~l~ 357 (363)
++|.++...|+
T Consensus 359 ~~~aaa~aal~ 369 (472)
T 1ohv_A 359 SKNLLLAEVIN 369 (472)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887765554
No 226
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.45 E-value=1.1e-12 Score=128.90 Aligned_cols=206 Identities=9% Similarity=-0.112 Sum_probs=143.4
Q ss_pred cHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccC-------CcEEEEeccchhHHHHHHHHHHHHh-
Q 017967 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-------QRVATVQGLSGTGSLRLAAALIERY- 174 (363)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-------~~i~~~~t~ggt~al~l~~~l~~~~- 174 (363)
+..+.+.+........ ..|....+..++++.+++++.+..|.+.+. ...++ |.|||+|..++....+..
T Consensus 87 ~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~--t~ggt~anl~al~~ar~~~ 163 (475)
T 3k40_A 87 PAIVADMLSGAIACIG-FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVI--QGTASESTLVALLGAKAKK 163 (475)
T ss_dssp HHHHHHHHHHHHCCCS-SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEE--ESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEE--cCchHHHHHHHHHHHHHHH
Confidence 3455555555554433 668788899999999999987766654321 24555 899999976663322111
Q ss_pred ----------------CCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC---CCcEEEEE
Q 017967 175 ----------------FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLH 235 (363)
Q Consensus 175 ----------------~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~i 235 (363)
.+++.|+++.+.|..+...++..|++++.+|++ +++ +|++.|++++++.. ..++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~ 240 (475)
T 3k40_A 164 LKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVV 240 (475)
T ss_dssp HHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEE
Confidence 134689999999999999999999999999984 356 99999999997521 12567777
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhc-CCeEEEEEcCccccccccccce
Q 017967 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 314 (363)
Q Consensus 236 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~l~G~RvG 314 (363)
+.++|+||.+- ++++|+++|+++|+++++|++|........ .... .... ..-..+..+++|.++.| ..+|
T Consensus 241 ~~~~t~~G~~~---~l~~I~~la~~~~~~lhvD~A~~~~~~~~~--~~~~---~~~gi~~~Ds~~~~~hK~l~~p-~g~g 311 (475)
T 3k40_A 241 TLGTTNSCAFD---YLDECGPVGNKHNLWIHVDAAYAGSAFICP--EYRH---LMKGIESADSFNFNPHKWMLVN-FDCS 311 (475)
T ss_dssp EBSCTTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGSG--GGGG---GGTTGGGCSEEEECHHHHSSCC-SSCE
T ss_pred EecCCCCcCcC---CHHHHHHHHHHhCCeEEEeHHhHHHHHhCH--hhHH---HhcCcccCCEEEECchhccCCC-CceE
Confidence 88999999974 567788889999999999999977543211 1111 1110 01235678899988743 5678
Q ss_pred EEEEeeCChhH
Q 017967 315 AMNVVCSSSDL 325 (363)
Q Consensus 315 ~i~~v~~~~~~ 325 (363)
++ +..++..
T Consensus 312 ~l--~~~~~~~ 320 (475)
T 3k40_A 312 AM--WLKDPSW 320 (475)
T ss_dssp EE--EESSGGG
T ss_pred EE--EEeCHHH
Confidence 88 6666653
No 227
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.06 E-value=1.8e-09 Score=103.62 Aligned_cols=172 Identities=12% Similarity=0.034 Sum_probs=112.5
Q ss_pred HHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC---CC-CEEEEcCCCCcchHHHHhhCCCCeEEEec-ccCCC
Q 017967 137 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---PG-AKVLISSPTWGNHKNIFNDARVPWSEYRY-YDPKT 211 (363)
Q Consensus 137 ~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~---~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~ 211 (363)
+|+... |.+-. ...++ ++|+|+++..+ ++..++ || |+|+++.-++......+...|++++.++. .+++.
T Consensus 124 d~L~~~-G~~~~-~~~fl--VnGsTgg~lam--ilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 124 DIIKLA-GVHTV-ANCFV--VPMATGMSLTL--CFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHT-TCTTC-CEEEE--ESSCHHHHHHH--HHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTE
T ss_pred HHHHHc-CCCCC-CcEEE--ECcHHHHHHHH--HHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccc
Confidence 454443 55422 23444 79999775554 444554 34 99999999999999999999999998853 33446
Q ss_pred CCCCHHHHHHHHHcCCCCcEEEEEc-CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHH
Q 017967 212 VGLDFEGMIADIKAAPGGSFILLHG-CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (363)
Q Consensus 212 ~~~d~~~l~~~l~~~~~~~~~~~i~-~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (363)
.++|++.+++++++.+...+++++. .+.|-.|.+ +++++|+++|++||+++++||+|....... ..-..+..
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~----~~lp~sA~ 270 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKC----MHLIQQGA 270 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHH----HHHHHHHH
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhh----hhhHHHHH
Confidence 8899999999998754234444433 344422332 478888999999999999999998764210 11112233
Q ss_pred hcCCeEEEEEcCccccccccccceEEEEeeCChh
Q 017967 291 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (363)
Q Consensus 291 ~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~ 324 (363)
..+.-.+++.|.-|.+-++ .. |++ +...+++
T Consensus 271 ~~GrAD~vVqS~HK~llvp-IG-G~i-i~~~d~e 301 (501)
T 3hl2_A 271 RVGRIDAFVQSLDKNFMVP-VG-GAI-IAGFNDS 301 (501)
T ss_dssp HHSCCCEEEEEHHHHHCCC-SS-CEE-EEESCHH
T ss_pred hcCCCcEEEecccccceee-cC-ceE-EEeCCHH
Confidence 4432445788999998655 11 334 2456676
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.99 E-value=2.7e-09 Score=103.08 Aligned_cols=183 Identities=10% Similarity=-0.051 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHhC----CCCEEEEcCCCCcchHHHHhhCCCCeEEE
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF----PGAKVLISSPTWGNHKNIFNDARVPWSEY 204 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~----~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 204 (363)
..+.+.+..++....|.+- ....++ ++|+|++...+ ++..++ +|+.|+++.-++......+...|+.++.+
T Consensus 97 ~~~e~~~~~~~~~~lGlp~-~~~~~l--V~GaT~~~~a~--~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v 171 (450)
T 3bc8_A 97 NKITNSLVLNVIKLAGVHS-VASCFV--VPMATGMSLTL--CFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVI 171 (450)
T ss_dssp HHHHHHHHHHHHHHHTCTT-CCEEEE--ESSCHHHHHHH--HHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCC-CceEEE--ECCHHHHHHHH--HHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEE
Confidence 3444445444433333321 122334 78888555544 233333 38999999999999999999999998888
Q ss_pred ec-ccCCCCCCCHHHHHHHHHcCC-CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCc
Q 017967 205 RY-YDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (363)
Q Consensus 205 ~~-~~~~~~~~d~~~l~~~l~~~~-~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (363)
+. .+++.+++|++.+++++.+.+ +.+.+++.+...|.+|.+ +++++|+++|++||+++++|++|...... .
T Consensus 172 ~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~----~ 244 (450)
T 3bc8_A 172 ENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSK----C 244 (450)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH----H
T ss_pred EeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhh----h
Confidence 53 223468899999999998754 233334333334444544 56788888999999999999999875321 0
Q ss_pred hhHHHHHHhcCCeEEEEEcCccccccccccceEEEEeeCChhHH
Q 017967 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA 326 (363)
Q Consensus 283 ~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~ 326 (363)
..-.+...+...-..++.|..|.+.. -.--+++ ...+++.+
T Consensus 245 ~~l~~~a~~~~~AD~~v~S~HK~l~a-~~~~~~l--~~rd~~~~ 285 (450)
T 3bc8_A 245 MHLIQQGARVGRIDAFVQSLDKNFMV-PVGGAII--AGFNEPFI 285 (450)
T ss_dssp HHHHHHHHHHSCCCEEEEEHHHHHSC-CSSCEEE--EESCHHHH
T ss_pred HhHHHHHhcccCCCEEEECCccCCCc-hhccEEE--EecCHHHH
Confidence 01111222221223467889998864 3334555 44567643
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.99 E-value=5.7e-09 Score=101.46 Aligned_cols=214 Identities=14% Similarity=0.070 Sum_probs=132.8
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
+.+++ .+||+..|.-...-|+ -.|.|.+++.+.+...... ..+..-..++.+.+++.+-. .+.+.+ +
T Consensus 83 D~dG~-~ylD~~~g~~~~~lGH--~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~p~-------~~~v~f--~ 149 (454)
T 4ao9_A 83 DADGH-RYADFIAEYTAGVYGH--SAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERFPQ-------IEQLRF--T 149 (454)
T ss_dssp ETTCC-EEEESSGGGGTTTTCS--CCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHSTT-------CSEEEE--E
T ss_pred ECCCC-EEEEccccHHhhcccC--CCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhCCC-------CCEEEE--e
Confidence 44554 7899876643222332 3466777766655443212 22333456777777777422 378877 9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCC--CeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
++|++|.+.+..+...+...++|+...-+|.+....+. ..++ ....+|+ -|++.+++.+.+..+...
T Consensus 150 ~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iA 222 (454)
T 4ao9_A 150 NSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIA 222 (454)
T ss_dssp SSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEE
T ss_pred CchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceE
Confidence 99999999987665555445788888888866432211 1111 1222232 378999999887555555
Q ss_pred EEEEcCCCCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccccccc
Q 017967 232 ILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 310 (363)
.+++-.-+.-.|.+. +++-+++|.++|++||+++|.||+..+ ..+. ...... ..-.++++ .|+|.+| .|
T Consensus 223 avIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G~----~~a~e~-~gv~PDi~---t~gK~lg-gG 292 (454)
T 4ao9_A 223 VVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLAP----HGLANK-LGIRSDLT---TLGKYIG-GG 292 (454)
T ss_dssp EEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGST----TCHHHH-HTCCCSEE---EEEGGGG-TT
T ss_pred EEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCcc----ccchhc-cCCCCcEE---EeccccC-CC
Confidence 555544455567654 567789999999999999999999764 2221 112222 23234444 5789998 78
Q ss_pred ccceEEEEeeCChh
Q 017967 311 ERIGAMNVVCSSSD 324 (363)
Q Consensus 311 ~RvG~i~~v~~~~~ 324 (363)
+-+|.+ ++. ++
T Consensus 293 ~Piga~--~~~-~e 303 (454)
T 4ao9_A 293 MSFGAF--GGR-AD 303 (454)
T ss_dssp SSCEEE--EEC-HH
T ss_pred Ccceee--eeH-HH
Confidence 999998 554 66
No 230
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=98.87 E-value=1.3e-09 Score=104.06 Aligned_cols=188 Identities=11% Similarity=-0.059 Sum_probs=116.0
Q ss_pred CCCCCccccHHHHHHHHHHHcc-----CC---CCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHH
Q 017967 95 TEELQPYVLDVVKKAENLMLER-----GE---NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (363)
Q Consensus 95 ~~~~~~~~~~~v~~a~~~~~~~-----~~---~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al 164 (363)
+..++..+++.|.+++...... .. .....+ ..-..+.|+.+++++... ++++|++ .|.|||+++
T Consensus 31 ~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~-----~~~evif-~t~~~T~a~ 104 (386)
T 3qm2_A 31 FSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIP-----SNYKVLF-CHGGGRGQF 104 (386)
T ss_dssp CCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCC-----TTEEEEE-EESCTTHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEE-EcCCchHHH
Confidence 4456677888888887543311 00 001111 335678999999998542 1245654 258999999
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCcc--hHHHHhhCCCCeEEEecc-cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017967 165 RLAAALIERYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (363)
Q Consensus 165 ~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NP 241 (363)
+++ +..++.+||+|++..-+... +...+++.| ++..++.+ .+++..++++.++++++ ++++++.+++..|.
T Consensus 105 n~a--i~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~---~~t~lV~~~h~et~ 178 (386)
T 3qm2_A 105 AGV--PLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS---DNAAYLHYCPNETI 178 (386)
T ss_dssp HHH--HHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC---TTCSCEEECSEETT
T ss_pred HHH--HHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC---CCCcEEEEECCcCC
Confidence 998 56667899998655443333 233456788 88888874 11222267777776665 34556777777888
Q ss_pred CCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 242 TGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 242 TG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
||+. .+.+++. +|+++++|.+ +.+...+. + + +.. ++ .+.|--|.+|.+| +|++
T Consensus 179 tG~~i~pi~~i~--------~g~~~~vDa~-qs~g~~pi--d---v----~~~-~~-~~~s~hK~lGP~G--~g~l 232 (386)
T 3qm2_A 179 DGIAIDETPDFG--------PEVVVTADFS-STILSAPL--D---V----SRY-GV-IYAGAQKNIGPAG--LTLV 232 (386)
T ss_dssp TTEECCCCCCCC--------TTCCEEEECT-TTTTSSCC--C---G----GGC-SE-EEEETTTTTCCTT--EEEE
T ss_pred cCEecCchhhhc--------CCCEEEEEcc-cccCCCCC--C---c----ccc-CE-EEEecccccCCCc--cEEE
Confidence 8996 6555442 7999999999 44443221 1 1 122 23 5688899999777 5887
No 231
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.80 E-value=1.7e-08 Score=95.40 Aligned_cols=195 Identities=10% Similarity=-0.040 Sum_probs=117.5
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC----C-CC--CC-CC--CcchHHHHHHHHHHHhcCCCCcccCCcEE
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----E-NK--EY-LP--IEGLAAFNKVTAELLFGADNSVLKEQRVA 153 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~-~~--~Y-~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (363)
++++|+. ++..+++.|.+++.+.+... . .+ .+ .+ ..-..+.|+.+++++.... +.+|+
T Consensus 5 ~~~~f~p-------gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~-----~~~v~ 72 (361)
T 3m5u_A 5 RKINFSA-------GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELND-----DYEVL 72 (361)
T ss_dssp CCEECCS-------SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCT-----TEEEE
T ss_pred ceEeecC-------CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CceEE
Confidence 4566764 34667888888887754210 0 00 11 11 1235677888888875421 23553
Q ss_pred EEeccchhHHHHHHHHHHHHhCCCCEEE-EcCCCCc-chHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 154 TVQGLSGTGSLRLAAALIERYFPGAKVL-ISSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~~~gd~Vl-v~~P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
+ .|.|||++++++ +..++ +||+++ +..-.|. .+...++..|+++..++.+....+..+++. + ++ ++++
T Consensus 73 f-~t~~~T~a~n~~--~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~---~~t~ 142 (361)
T 3m5u_A 73 F-LQGGASLQFAMI--PMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FS---DNAD 142 (361)
T ss_dssp E-ESSHHHHHHHHH--HHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CC---TTSS
T ss_pred E-EcCcHHHHHHHH--HHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cC---CCCC
Confidence 2 489999999998 55666 888653 2222332 223455678999999998432111145555 3 54 3456
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccc
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~ 311 (363)
++.+++..|.||+.++. | ++ +|+++++|.+ +.+...+.+ . + .--+++.|--|.+|.+|
T Consensus 143 lv~~~~~e~~tG~~~~~-----i---~~-~~~~~~vD~~-q~~g~~~id--~-------~--~~d~~~~s~~K~~gp~G- 200 (361)
T 3m5u_A 143 YAYICSNNTIYGTQYQN-----Y---PK-TKTPLIVDAS-SDFFSRKVD--F-------S--NIALFYGGVQKNAGISG- 200 (361)
T ss_dssp EEEEESEETTTTEECSS-----C---CC-CSSCEEEECG-GGTTSSCCC--C-------T--TEEEEEEETTTTSSCTT-
T ss_pred EEEEeCCCCCcceeCCc-----c---cc-cCCEEEEEcc-cccCCCCCC--c-------c--cCCEEEEechhccCCCc-
Confidence 67778878888998762 2 33 4999999998 444332211 1 1 12367788899999777
Q ss_pred cceEEEEeeCChhHH
Q 017967 312 RIGAMNVVCSSSDLA 326 (363)
Q Consensus 312 RvG~i~~v~~~~~~~ 326 (363)
+|++ +.. ++..
T Consensus 201 -~g~l--~~~-~~~~ 211 (361)
T 3m5u_A 201 -LSCI--FIR-KDML 211 (361)
T ss_dssp -CEEE--EEE-HHHH
T ss_pred -cEEE--EEc-HHHH
Confidence 5888 544 5533
No 232
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=98.73 E-value=9.4e-09 Score=97.71 Aligned_cols=185 Identities=11% Similarity=-0.024 Sum_probs=118.1
Q ss_pred CCCccccHHHHHHHHHHHccC-----CC---CCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHH
Q 017967 97 ELQPYVLDVVKKAENLMLERG-----EN---KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL 166 (363)
Q Consensus 97 ~~~~~~~~~v~~a~~~~~~~~-----~~---~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l 166 (363)
.+...+++.|.+++.+..... .. ....+ ..-..+.|+.+++++... ++.+|++ .|.|||+++++
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~-----~~~evif-~t~~~T~a~n~ 92 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVP-----DNYKVIF-LQGGGCGQFSA 92 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCC-----TTEEEEE-ESSHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE-EcCchHHHHHH
Confidence 345567888888887765210 00 01111 123467788888887542 1245654 24799999999
Q ss_pred HHHHHHHhCC--CCEEEEcCCCCcch--HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017967 167 AAALIERYFP--GAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (363)
Q Consensus 167 ~~~l~~~~~~--gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPT 242 (363)
+ +..++.+ ||+|++..-++... ...+++.|..++.++.+ ++++.+++.++..++ ++++++.+++..|.|
T Consensus 93 a--~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~---~~t~lV~~~h~et~t 165 (377)
T 3e77_A 93 V--PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLN---PDASYVYYCANETVH 165 (377)
T ss_dssp H--HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCC---TTCSCEEEESEETTT
T ss_pred H--HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccC---CCccEEEEeCccCch
Confidence 8 5566654 99988777655333 34556788877777762 345667777655444 345566677778888
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHhcCCeEEEEEcCccccccccccceEE
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~l~G~RvG~i 316 (363)
|+.++. +|+++|+++++|.+ +.+...+.+ + +..+ + ++.|--|.+|.+| +|++
T Consensus 166 G~~~pi--------i~~~~~~~~~vD~~-q~~g~~~id-----~----~~~~-~-~~~s~~K~~gp~G--~g~l 217 (377)
T 3e77_A 166 GVEFDF--------IPDVKGAVLVCDMS-SNFLSKPVD-----V----SKFG-V-IFAGAQKNVGSAG--VTVV 217 (377)
T ss_dssp TEECSS--------CCCCTTCCEEEECT-TTTTSSCCC-----G----GGCS-E-EEEEGGGTTSCTT--CEEE
T ss_pred heEchh--------hhccCCCEEEEEcc-cccCCCCCc-----h----hhcC-E-EEEecccccCCCc--cEEE
Confidence 999986 36788999999999 444432211 1 1212 3 6678899999888 5777
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.50 E-value=1.6e-06 Score=84.39 Aligned_cols=255 Identities=14% Similarity=0.056 Sum_probs=138.4
Q ss_pred hcCCCCCcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CC-CCCCCCcchHHHHHHHHHHHhcCCCCcccCCcEEEE
Q 017967 78 KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (363)
Q Consensus 78 ~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (363)
+.+++ .+||+..|.-...-|+ -.+.+.+++.+....- +. ..+.+.....+|-+.+++..-.. ..+++.+
T Consensus 60 D~dG~-~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-----~~~~v~f- 130 (456)
T 4atq_A 60 DVDGN-SFIDLGSGIAVTSVGA--SDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGD-----HAKRTVL- 130 (456)
T ss_dssp ETTSC-EEEESSHHHHTCTTCT--TCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCS-----SCEEEEE-
T ss_pred eCCCC-EEEEccccHHHHhcCC--CCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCC-----CCcEEEE-
Confidence 44544 7888877742222232 2455666655544321 11 12223444456666666653111 1246766
Q ss_pred eccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhC-------------CCCeEEEecccC----CCCCCCHH
Q 017967 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDA-------------RVPWSEYRYYDP----KTVGLDFE 217 (363)
Q Consensus 156 ~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~-------------G~~~~~v~~~~~----~~~~~d~~ 217 (363)
+++|++|.+.+..+........+|+...-+|.+... .+... ...+..+|.... .....+.+
T Consensus 131 -~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~ 209 (456)
T 4atq_A 131 -FNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAE 209 (456)
T ss_dssp -ESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHH
T ss_pred -eCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHH
Confidence 899999999997766555555789988888866532 22111 113444443111 11112233
Q ss_pred HHHHHHHc-----CCCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHHHh
Q 017967 218 GMIADIKA-----APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (363)
Q Consensus 218 ~l~~~l~~-----~~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (363)
.+++.+.. .++....+++-.-+.-.|.. .+++-+++|.++|++||+++|.||+..+|.-.+. .+....+ .
T Consensus 210 ~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~---~~a~e~~-g 285 (456)
T 4atq_A 210 AAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE---WFAVDHE-G 285 (456)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGGT-T
T ss_pred HHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc---ccccccc-C
Confidence 33333321 22334455543334445654 5567899999999999999999999988743321 2222111 2
Q ss_pred cCCeEEEEEcCccccccccccceEEEEeeCChhHHHHHHHHHHhhhccccCCCchHHHHHHhcccc
Q 017967 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 292 ~~~~vi~~~S~SK~~~l~G~RvG~i~~v~~~~~~~~~~~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 357 (363)
-.++++ .|+|.+| .|+-+|.+ ++. ++ +.+.+........++-++++..++...|+
T Consensus 286 v~PDiv---t~gK~lg-gg~P~~av--~~~-~~----i~~~~~~~~~~~Tf~gnpla~aaala~L~ 340 (456)
T 4atq_A 286 VVPDII---TMAKGIA-GGLPLSAI--TGR-AD----LLDAVHPGGLGGTYGGNPVACAAALAAID 340 (456)
T ss_dssp CCCSEE---EECGGGG-TTSSCEEE--EEE-HH----HHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred CCCchh---hhhhccc-CcCCceee--Eec-HH----HHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence 224443 4579998 89999998 655 55 44444333223344555666555544443
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.45 E-value=6.8e-06 Score=85.70 Aligned_cols=125 Identities=10% Similarity=0.110 Sum_probs=78.0
Q ss_pred HHHHHHHHc-----CCCCcEEEEEcCC--CCCCCCCC-CHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHH
Q 017967 217 EGMIADIKA-----APGGSFILLHGCA--HNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (363)
Q Consensus 217 ~~l~~~l~~-----~~~~~~~~~i~~p--~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (363)
+.+++.+.+ .+++...++ ..| ++..|... +++.+++|.++|++||+++|+||++.+|...+. ......
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi-~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~---~fa~e~ 652 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALI-IEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV---ETTTEL 652 (831)
T ss_dssp HHHHHHC---------CEEEEEE-ECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB---SSTHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEE-EecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC---chhhHh
Confidence 456666642 223344444 455 78888765 778899999999999999999999999855431 222222
Q ss_pred HHhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhh------ccccCCCchHHHHHHhcccc
Q 017967 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLA------RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 289 ~~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~------~~~~~~~s~~~q~~~~~~l~ 357 (363)
+ .-.++++ +|+|.++ .| +++|++ +++ ++ +.+.+.... ....++.+++++.++...|+
T Consensus 653 ~-gv~PDii---tlsK~L~-gG~~Plgav--~~~-~~----i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~ 716 (831)
T 4a0g_A 653 L-GCKPDIA---CFAKLLT-GGMVPLAVT--LAT-DA----VFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQ 716 (831)
T ss_dssp H-SSCCSEE---EECGGGG-TTSSCCEEE--EEC-HH----HHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred c-CCCCcEE---EEecccc-cCccCcEEE--EEC-HH----HHHHHhcccccccceeecCCcccHHHHHHHHHHHH
Confidence 2 3334443 6999998 57 799999 765 66 444443211 12334556676666655444
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.19 E-value=0.00011 Score=71.83 Aligned_cols=253 Identities=13% Similarity=0.116 Sum_probs=132.6
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccC-CCCCCCC--CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccch
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (363)
.+||+..|.-...-|+ -.+.+.+++.+.+..- ....+.. ..-..+|-+.+++..- ..-++|.+ +++|
T Consensus 68 ~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p------~~~~~v~f--~~sG 137 (473)
T 4e3q_A 68 RYLDANSGLWNMVAGF--DHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSP------FDSGRVFY--TNSG 137 (473)
T ss_dssp EEEETTTTTTTCTTCS--CCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSS------CSSCEEEE--ESSH
T ss_pred EEEEcccCHHHhhccC--CCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCC------CCccEEEE--eCch
Confidence 6888876653222232 2456666665544331 1111111 1112234444444421 12368888 9999
Q ss_pred hHHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchHH-HHhhCC--------C---CeEEEeccc---CCCCCCC----
Q 017967 161 TGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKN-IFNDAR--------V---PWSEYRYYD---PKTVGLD---- 215 (363)
Q Consensus 161 t~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~-~~~~~G--------~---~~~~v~~~~---~~~~~~d---- 215 (363)
++|.+.+..+...+ .++ .+|+...-+|.+... .+...| . ....++... ....+-.
T Consensus 138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 217 (473)
T 4e3q_A 138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF 217 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence 99999987665433 133 568888878865422 221111 1 122232100 0011111
Q ss_pred ----HHHHHHHHHcC-CCCcEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhcCCeEEEecCCCCCcCCCCCCchhHHHHH
Q 017967 216 ----FEGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (363)
Q Consensus 216 ----~~~l~~~l~~~-~~~~~~~~i~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (363)
.+++++.+... ++....+++-.-+.-.|.. .+++-+++|.++|+++|+++|.||+..+|.-.+ ..+....+
T Consensus 218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG---~~fa~e~~ 294 (473)
T 4e3q_A 218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTG---NTWGCVTY 294 (473)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTS---SSCHHHHT
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCccc---chhHHHhc
Confidence 23455555432 2334455544445555654 456789999999999999999999999984332 12233222
Q ss_pred HhcCCeEEEEEcCcccccccc-ccceEEEEeeCChhHHHHHHHHHHhhh---ccccCCCchHHHHHHhcccc
Q 017967 290 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLA---RPMYSNPPPMLLGIQLSSMN 357 (363)
Q Consensus 290 ~~~~~~vi~~~S~SK~~~l~G-~RvG~i~~v~~~~~~~~~~~~~l~~~~---~~~~~~~s~~~q~~~~~~l~ 357 (363)
.-.++++ .++|.++ .| +-+|.+ ++. ++..+.+........ -...++-++++..++...|+
T Consensus 295 -gv~PDi~---t~~K~l~-gG~~Pl~av--~~~-~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~ 358 (473)
T 4e3q_A 295 -DFTPDAI---ISSKNLT-AGFFPMGAV--ILG-PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAID 358 (473)
T ss_dssp -TCCCSEE---EECGGGG-TTSSCCEEE--EEC-HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred -CCCCChH---Hhccccc-CCCCCcccc--ccc-HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhh
Confidence 3334544 4689998 56 899999 665 775444443333221 12233445555555544433
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.05 E-value=2.6e-05 Score=74.71 Aligned_cols=209 Identities=15% Similarity=0.149 Sum_probs=112.8
Q ss_pred CcEEeeccccCCCCCCccccHHHHHHHHHHHccCCCCCCCC------CcchHHHHHHHHHHHhcCCCCcccCCcEEEEec
Q 017967 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (363)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (363)
..|+|=.-++ +..+.|.++....+......+|+. ..-..++.....+.....++..+..+.| =+|.
T Consensus 55 ~~ieLIASEN-------~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~V-NVQP 126 (490)
T 3ou5_A 55 RGLELIASEN-------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGV-NVQP 126 (490)
T ss_dssp HSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEE-ECCC
T ss_pred cCceEecCCC-------cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCC-CCCc
Confidence 5678765443 357788888766664333333321 1112222222222222223332222222 1356
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH--------HhhCCC--CeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI--------FNDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--------~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
.+|+.|...+ +++++.|||+|+..+....++... +...|. +.+.|+++ ++++.+|.|.+++...+.
T Consensus 127 ~SGs~AN~av--y~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd-~~t~~IDyd~~~~~A~~~- 202 (490)
T 3ou5_A 127 YSGSPANLAV--YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN-PKTGLIDYNQLALTARLF- 202 (490)
T ss_dssp SSHHHHHHHH--HHHHCC-CCCEECBC----------------------------CBCEE-TTTTEECHHHHHHHHHHH-
T ss_pred CCHHHHHHHH--HHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccC-CCCCcccHHHHHHHHhhc-
Confidence 8888886666 778889999999999887776432 112232 45556664 456789999999988763
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC-CCCcCCCCCCchhHHHHHHhcCCeEEEEEcCcccc
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 306 (363)
++++++..--.+|- .++ ++++.++|.+.|.++++|.+. .++.-++.-+++ + +. --++..|..|+|
T Consensus 203 -kPklIi~G~SaY~r--~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP--~----~~--ADvVTtTTHKTL 268 (490)
T 3ou5_A 203 -RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSP--F----KH--ADIVTTTTHKTL 268 (490)
T ss_dssp -CCSEEEECCSSCCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG--G----GT--CSEEEEESSSTT
T ss_pred -CCCeEEECCccCcc--ccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCc--c----cc--ceEEeccccccc
Confidence 45577766655554 233 455556688899999999995 233322221111 1 11 236688889998
Q ss_pred ccccccceEEEEeeCC
Q 017967 307 GLYAERIGAMNVVCSS 322 (363)
Q Consensus 307 ~l~G~RvG~i~~v~~~ 322 (363)
.|=|-|.| .+.+
T Consensus 269 --rGPrGG~I--l~~~ 280 (490)
T 3ou5_A 269 --RGARSGLI--FYRK 280 (490)
T ss_dssp --CSCSCEEE--EEEC
T ss_pred --cCCCceEE--Eecc
Confidence 59999998 6543
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=66.88 E-value=55 Score=31.79 Aligned_cols=68 Identities=16% Similarity=0.092 Sum_probs=43.1
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
.+..++.++..+.+.|+..|.+..+.+-+.-.. +.. ..-..+.|-.||++|+++|++.|++++|-||-
T Consensus 207 ~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~---Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 207 LASQYKINKFHMHLSDDQGWRIEIKSWPDLIEI---GSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT---TTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHcCCcEEEEEeccCCccccccccchhhhhc---cCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 334667777777776555566655555443221 110 00112346689999999999999999988773
No 238
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=65.18 E-value=43 Score=25.42 Aligned_cols=98 Identities=7% Similarity=-0.027 Sum_probs=59.8
Q ss_pred cchhHHHHHHHHHHHHhC---CCCEEEEcCCCCcchHHHHhhCCCC---eEEEecccCCCCCCCHHHHHHHHHcCCCCcE
Q 017967 158 LSGTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDARVP---WSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (363)
..|.+.+.++.-++..+. .+..|+...|.+..+...+...|+. ++.+... +..-.+..+|++++. +..
T Consensus 11 ~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~---~~~d~lwa~EqaLrs---g~~ 84 (119)
T 1ofu_X 11 GLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAK---DNAAALALSCEALRL---GRS 84 (119)
T ss_dssp SCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCS---SHHHHHHHHHHHHHH---TCE
T ss_pred CCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECC---CcHHHHHHHHHHHhc---CCc
Confidence 345555555544555554 4566777788888899999999985 4445431 112235788888885 333
Q ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 232 ~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
-.++.-.. .++..+.+++--.+++-+.+.+
T Consensus 85 ~aVl~wl~-----~l~~~~~RRLqlAA~~g~~~~~ 114 (119)
T 1ofu_X 85 HTVVSWLE-----PLSRAARKQLSRAAQLGQAQSL 114 (119)
T ss_dssp EEEEECCS-----SCCHHHHHHHHHHHHHHTCEEE
T ss_pred cEEEECCC-----cCChHHHHHHHHHHHhCCCeEE
Confidence 33334322 2677888888777776665433
No 239
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=64.16 E-value=24 Score=31.09 Aligned_cols=95 Identities=15% Similarity=0.049 Sum_probs=54.2
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFIL 233 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~ 233 (363)
..|++.++-... ...+...|..|++.+-.-......++..|.+...+..| --|.+++++.+.+ .-.+.-++
T Consensus 34 VTGas~GIG~ai-A~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 34 ITGATSGIGLAA-AKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQAD-----SANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECC-----TTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred EeCcCCHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEE
Confidence 345555544331 23345589888887655555566677778888888763 2355555554432 11123344
Q ss_pred EEcCCCCCCCC--CCCHHHHHHHHHH
Q 017967 234 LHGCAHNPTGI--DPTPEQWEKIADV 257 (363)
Q Consensus 234 ~i~~p~NPTG~--~~s~~~~~~i~~~ 257 (363)
+.+-..++.+. .++.++|++++++
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred EECCCCCCCCChhhccHHHHHHHHHH
Confidence 43333344332 3678999998865
No 240
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=56.47 E-value=85 Score=26.02 Aligned_cols=93 Identities=9% Similarity=0.005 Sum_probs=49.9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
.||++++-... ...+...|..|++..-.-.......+..+.++..+..| --|.+.+++.+.......-+++.+-
T Consensus 7 TGas~gIG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 7 TGASSGLGAEL-AKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARD-----LASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp ESTTSHHHHHH-HHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECC-----TTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred ecCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeec-----CCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 45555543331 12334578777777655455555555666666666552 2467888888775332223444333
Q ss_pred CCCCCCC--CCCHHHHHHHHH
Q 017967 238 AHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 238 p~NPTG~--~~s~~~~~~i~~ 256 (363)
...+.+. ..+.++++++.+
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHH
T ss_pred CcCCCCccccCCHHHHHHHHH
Confidence 3333332 357777776554
No 241
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=55.50 E-value=28 Score=33.71 Aligned_cols=66 Identities=8% Similarity=-0.057 Sum_probs=41.5
Q ss_pred hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 195 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 195 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
..++.++..+.+.|+..|.+.++.+-+.-.. +. . .......|-.+|.+|+++|++.|++++|-||-
T Consensus 184 a~~KlN~lh~HltDdq~wriei~~~P~Lt~~---ga--~--~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 184 ARYKYNKLHLHLSDDQGWRIAIDSWPRLATY---GG--S--TEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HTTTCCEEEEECBCSSCBCBCCTTSTHHHHT---TT--S--CCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCCcEEEEEeccCCCceehhhhhHHHHhh---cC--c--cccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4567777777665554566655544443221 11 0 01112336789999999999999999998884
No 242
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=53.94 E-value=92 Score=27.44 Aligned_cols=14 Identities=43% Similarity=0.591 Sum_probs=10.9
Q ss_pred CCCCCCHHHHHHHH
Q 017967 242 TGIDPTPEQWEKIA 255 (363)
Q Consensus 242 TG~~~s~~~~~~i~ 255 (363)
||..++.+.+.+|+
T Consensus 139 tg~~l~~~~~~~La 152 (292)
T 2ojp_A 139 TGCDLLPETVGRLA 152 (292)
T ss_dssp HSCCCCHHHHHHHH
T ss_pred hccCCCHHHHHHHH
Confidence 78888888777774
No 243
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=53.10 E-value=18 Score=35.07 Aligned_cols=62 Identities=10% Similarity=0.046 Sum_probs=39.1
Q ss_pred hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 195 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 195 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
..++.++..+.+.|+..|.+..+.+-+.-.. +. ..|.|-.+|.+|+++|++.|++++|-||-
T Consensus 172 A~~KlN~lh~HltDdq~wr~ei~~~P~Lt~~---Ga--------~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 172 AYNKLNVFHWHLVDDPSFPYESFTFPELMRK---GS--------YNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp HHTTCCEEEEECCCSSCCCBCCSSCTHHHHH---HS--------SCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCCceEEEEEecccCeeeeccccchhhhc---cc--------cCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4566777776665444555543333222110 00 12446679999999999999999988873
No 244
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=51.32 E-value=74 Score=28.06 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=16.1
Q ss_pred CCCCCCHHHHHHHHHHHHh-cCCeEEEecC
Q 017967 242 TGIDPTPEQWEKIADVIQE-KNHIPFFDVA 270 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~-~~~~ii~De~ 270 (363)
||..++.+.+.+|+ ++ .++.=|=|..
T Consensus 138 tg~~l~~~~~~~La---~~~pnIvgiK~s~ 164 (292)
T 2vc6_A 138 SAIEIHVETLARIF---EDCPNVKGVXDAT 164 (292)
T ss_dssp HSCCCCHHHHHHHH---HHCTTEEEEEECS
T ss_pred cCcCCCHHHHHHHH---hhCCCEEEEecCC
Confidence 78888888877774 32 3444444433
No 245
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=50.56 E-value=1.4e+02 Score=26.67 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=15.6
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEec
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De 269 (363)
||..++.+.+.+|+ +-.++.=|=|.
T Consensus 161 tg~~l~~~~~~~La---~~pnIvgiKds 185 (314)
T 3qze_A 161 TSCDMLPETVERLS---KVPNIIGIKEA 185 (314)
T ss_dssp HSCCCCHHHHHHHH---TSTTEEEEEEC
T ss_pred cCCCCCHHHHHHHh---cCCCEEEEEcC
Confidence 78888888877764 22345444444
No 246
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=48.94 E-value=14 Score=35.13 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=25.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
++|.|-.+|++|+++|++.|++++|-||
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VI 112 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLI 112 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeee
Confidence 4577889999999999999999998887
No 247
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=48.08 E-value=27 Score=33.82 Aligned_cols=60 Identities=8% Similarity=-0.025 Sum_probs=38.1
Q ss_pred hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 195 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 195 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
..++.++..+.+.|+..|.+..+.+-+.-.. +. ..| |-.+|.+|+++|++.|++++|-||
T Consensus 178 a~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~---Ga--------~~~-~~~YT~~di~eiv~yA~~rgI~VI 237 (507)
T 1now_A 178 AFNKFNVLHWHIVDDQSFPYQSITFPELSNK---GS--------YSL-SHVYTPNDVRMVIEYARLRGIRVL 237 (507)
T ss_dssp HHTTCCEEEEECCCSSCCCBCCSSCHHHHHH---HS--------SST-TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHhCCcEEEEeeccCccceeeccchhhhhcc---cC--------cCC-CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4566777776664444455544333332211 00 012 667999999999999999998887
No 248
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=47.60 E-value=53 Score=28.87 Aligned_cols=19 Identities=0% Similarity=-0.293 Sum_probs=14.8
Q ss_pred chHHHHhhCCCCeEEEecc
Q 017967 189 NHKNIFNDARVPWSEYRYY 207 (363)
Q Consensus 189 ~~~~~~~~~G~~~~~v~~~ 207 (363)
.....++..|++.+.+|+.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~ 54 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLS 54 (302)
T ss_dssp THHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEEEcc
Confidence 3455677899999999974
No 249
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=46.73 E-value=1.4e+02 Score=25.68 Aligned_cols=93 Identities=14% Similarity=0.052 Sum_probs=49.4
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 231 (363)
.||++++-... ...+...|.+|++.+-.-....+. ++..|.++..+..| --|.+.+++.+.+ .-.+.-
T Consensus 15 TGas~GIG~ai-a~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iD 88 (255)
T 4g81_D 15 TGSARGLGFAY-AEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD-----VTDELAIEAAFSKLDAEGIHVD 88 (255)
T ss_dssp TTCSSHHHHHH-HHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC-----TTCHHHHHHHHHHHHHTTCCCC
T ss_pred eCCCcHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEee-----CCCHHHHHHHHHHHHHHCCCCc
Confidence 44545543331 233445899998876543333333 34668888887763 2345555554433 222233
Q ss_pred EEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 232 ILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 232 ~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
+++.+-.-++.+. .++.++|+++++
T Consensus 89 iLVNNAG~~~~~~~~~~~~e~~~~~~~ 115 (255)
T 4g81_D 89 ILINNAGIQYRKPMVELELENWQKVID 115 (255)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5553333334333 367899988765
No 250
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=45.61 E-value=78 Score=28.61 Aligned_cols=26 Identities=15% Similarity=-0.101 Sum_probs=17.5
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
||..++.+.+.+|++ -.++.=|=|..
T Consensus 172 tg~~l~~e~~~~La~---~pnIvgiKdss 197 (332)
T 2r8w_A 172 TRFTFSDELLVRLAY---IPNIRAIKMPL 197 (332)
T ss_dssp HCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred cCcCCCHHHHHHHHc---CCCEEEEEeCC
Confidence 899999988888753 23554455544
No 251
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=44.77 E-value=80 Score=26.66 Aligned_cols=93 Identities=19% Similarity=0.112 Sum_probs=49.3
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~ 234 (363)
.||++++-... ...+...|.+|++..-.-..........|.++..+..| --|.+.+++.+... -.+.-+++
T Consensus 12 TGas~gIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv 85 (247)
T 3rwb_A 12 TGAAQGIGKAI-AARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD-----ISDPGSVKALFAEIQALTGGIDILV 85 (247)
T ss_dssp ETTTSHHHHHH-HHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCC-----TTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred ECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 45555543331 12334578888887665555555555567777777653 23556666555421 01233555
Q ss_pred EcCCCCCCCC--CCCHHHHHHHHH
Q 017967 235 HGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
.+-...+.+. ..+.++++++++
T Consensus 86 ~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 86 NNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHH
Confidence 4433333332 457788777654
No 252
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=44.69 E-value=14 Score=35.05 Aligned_cols=28 Identities=18% Similarity=0.238 Sum_probs=24.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
++|.|-.+|++|+++|++.|++++|-||
T Consensus 82 ~~~~~~~YT~~di~eIv~YA~~rgI~VI 109 (434)
T 2yl6_A 82 NDPNGNHLTESQMTDLINYAKDKGIGLI 109 (434)
T ss_dssp CCTTCSCEEHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 3466789999999999999999998887
No 253
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=44.12 E-value=91 Score=27.00 Aligned_cols=90 Identities=11% Similarity=0.011 Sum_probs=47.4
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcC
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~ 237 (363)
.||++++-... ...+...|.+|++..-.-.......+..+.++..+..| --|.+.+++.+.+. .+.-+++++-
T Consensus 22 TGas~gIG~~~-a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----l~d~~~v~~~~~~~-~~iD~lv~nA 94 (291)
T 3rd5_A 22 TGANSGLGAVT-ARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELD-----LQDLSSVRRFADGV-SGADVLINNA 94 (291)
T ss_dssp ECCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECC-----TTCHHHHHHHHHTC-CCEEEEEECC
T ss_pred eCCCChHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcC-----CCCHHHHHHHHHhc-CCCCEEEECC
Confidence 45555543331 12334578888777654444455555666667776663 24788888888754 2234554333
Q ss_pred CCCCCCCCCCHHHHHHH
Q 017967 238 AHNPTGIDPTPEQWEKI 254 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i 254 (363)
.-.......+.+++++.
T Consensus 95 g~~~~~~~~~~~~~~~~ 111 (291)
T 3rd5_A 95 GIMAVPYALTVDGFESQ 111 (291)
T ss_dssp CCCSCCCCBCTTSCBHH
T ss_pred cCCCCcccCCHHHHHHH
Confidence 22222233455554443
No 254
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=43.21 E-value=1.8e+02 Score=25.77 Aligned_cols=27 Identities=11% Similarity=0.124 Sum_probs=17.2
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 241 PTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
-||..++.+.+.+|++ -.++.=|=|..
T Consensus 149 ~tg~~l~~~~~~~La~---~pnIvgiK~s~ 175 (303)
T 2wkj_A 149 LSGVKLTLDQINTLVT---LPGVGALXQTS 175 (303)
T ss_dssp HHCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred ccCCCCCHHHHHHHhc---CCCEEEEeCCC
Confidence 3788888888877743 23554454544
No 255
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=42.55 E-value=93 Score=32.18 Aligned_cols=117 Identities=9% Similarity=0.014 Sum_probs=63.7
Q ss_pred CcccCCcEEEEeccch-hHHHHHHHHHHHHhCCCC--E----EEEcCCCCc-------------------chHHHHhhCC
Q 017967 145 SVLKEQRVATVQGLSG-TGSLRLAAALIERYFPGA--K----VLISSPTWG-------------------NHKNIFNDAR 198 (363)
Q Consensus 145 ~~~~~~~i~~~~t~gg-t~al~l~~~l~~~~~~gd--~----Vlv~~P~y~-------------------~~~~~~~~~G 198 (363)
..++++.|.+ +... .|++.-+..+.+++..++ . .+...|.|. .+...+..++
T Consensus 264 L~v~~~~i~I--~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~K 341 (858)
T 1c7s_A 264 LKIGKKEAQV--IGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYK 341 (858)
T ss_dssp EEECSSCEEE--EESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCeEEE--EEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhC
Confidence 3455667766 5444 444444444455554332 1 233446663 1223344667
Q ss_pred CCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEE--------EEEcC-CCC--CCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI--------LLHGC-AHN--PTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~--------~~i~~-p~N--PTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
+++..+.+.|+..|.+.++.+-+.-.. +..= .+.+. .++ |.|-.+|.+|+++|++.|++++|-||
T Consensus 342 lN~lh~HltDdqgwriei~~yP~Lt~~---Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VI 417 (858)
T 1c7s_A 342 LNKFHFHLSDDEGWRIEIPGLPELTEV---GGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVI 417 (858)
T ss_dssp CCEEEEECEETTEECBCCTTCTHHHHT---TTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEE
T ss_pred CcEEEEEeccCccccccccCCchhhhc---cccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 777777765555566655544433221 0000 00000 011 34678999999999999999998877
No 256
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=41.03 E-value=1.4e+02 Score=23.95 Aligned_cols=95 Identities=7% Similarity=-0.012 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHHHHhC---CCCEEEEcCCCCcchHHHHhhCCCC---eEEEecccCCCCCCCHHHHHHHHHcCCCCcEEE
Q 017967 160 GTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDARVP---WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL 233 (363)
Q Consensus 160 gt~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 233 (363)
+.+.+.+++-++..+. .+..|+-..|-+..+...+...|+. ++.+... +..-.+..+|++++. +..-.
T Consensus 55 g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~---~~~daLwa~EqALrs---G~~~a 128 (161)
T 1oft_A 55 PGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAK---DNAAALALSCEALRL---GRSHT 128 (161)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCS---STTHHHHHHHHHHHT---TCEEE
T ss_pred cHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECC---ChHHHHHHHHHHHhc---CCccE
Confidence 3444444433444443 4556777778788899999999986 4444432 222346788899984 34333
Q ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE
Q 017967 234 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (363)
Q Consensus 234 ~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 265 (363)
+++-.. .++..+.+++---+++-+...
T Consensus 129 Vl~Wl~-----~l~~~~~RRLqlAAe~g~~~~ 155 (161)
T 1oft_A 129 VVSWLE-----PLSRAARKQLSRAAQLGQAQS 155 (161)
T ss_dssp EEECCS-----SCCHHHHHHHHHHHHHTTCEE
T ss_pred EEECCC-----cCChHHHHHHHHHHHhCCCeE
Confidence 334322 267788888876666655543
No 257
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=40.68 E-value=1.9e+02 Score=25.39 Aligned_cols=26 Identities=19% Similarity=0.190 Sum_probs=16.4
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
||..++.+.+.+|++ -.++.=|=|..
T Consensus 142 tg~~l~~~~~~~La~---~pnIvgiK~s~ 167 (293)
T 1f6k_A 142 TGVNMGIEQFGELYK---NPKVLGVKFTA 167 (293)
T ss_dssp HCCCCCHHHHHHHHT---STTEEEEEECS
T ss_pred cCcCCCHHHHHHHhc---CCCEEEEEECC
Confidence 788888888777742 23444444544
No 258
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=40.17 E-value=97 Score=27.27 Aligned_cols=13 Identities=23% Similarity=0.549 Sum_probs=10.2
Q ss_pred CC-CEEEEcCCCCc
Q 017967 176 PG-AKVLISSPTWG 188 (363)
Q Consensus 176 ~g-d~Vlv~~P~y~ 188 (363)
-| |.|++..|.|.
T Consensus 95 ~Gadavlv~~P~y~ 108 (291)
T 3a5f_A 95 IGVDGLLVITPYYN 108 (291)
T ss_dssp TTCSEEEEECCCSS
T ss_pred cCCCEEEEcCCCCC
Confidence 34 88999889884
No 259
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=39.70 E-value=2e+02 Score=25.38 Aligned_cols=26 Identities=8% Similarity=0.157 Sum_probs=16.6
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
||..++.+.+.+|++ -.++.=|=|..
T Consensus 150 tg~~l~~~~~~~La~---~pnIvgiKdss 175 (301)
T 1xky_A 150 SIVQISVDTVVRLSE---IENIVAIKDAG 175 (301)
T ss_dssp HSSCCCHHHHHHHHT---STTEEEEEECS
T ss_pred cCCCCCHHHHHHHHc---CCCEEEEEcCC
Confidence 788888888777742 23454454544
No 260
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=38.59 E-value=47 Score=32.65 Aligned_cols=60 Identities=8% Similarity=-0.052 Sum_probs=38.1
Q ss_pred hhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 195 NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 195 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
..+++++..+.+.|+..|.+..+.+-+.-.. +. ...|..+|.+|+++|++.|++++|-||
T Consensus 214 A~~KlN~lH~HltDdqgwrlei~~~P~Lt~~---Ga---------~~~~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 214 AAVKLNTFHWHITDSQSFPFVTTKRPNLYKF---GA---------LSPQKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp HHTTCCEEEEECCCSSCCCBCCSSSHHHHHH---HS---------SSSSSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHcCCceEEEEeecCcCceeccccCcchhcc---CC---------cCCCCCcCHHHHHHHHHHHHHhCCcee
Confidence 3566677666665444555544443332210 00 113568999999999999999998777
No 261
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=38.54 E-value=2.1e+02 Score=25.37 Aligned_cols=26 Identities=27% Similarity=0.342 Sum_probs=17.3
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 242 TG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
||..++.+.+.+|++ -.++.=|=|..
T Consensus 146 tg~~l~~~~~~~La~---~pnIvgiKdss 171 (311)
T 3h5d_A 146 VVVELTPETMLRLAD---HPNIIGVKECT 171 (311)
T ss_dssp HSSCCCHHHHHHHHT---STTEEEEEECS
T ss_pred cCCCCCHHHHHHHhc---CCCEEEEEeCC
Confidence 788888888777753 24555555543
No 262
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=37.08 E-value=1.2e+02 Score=25.62 Aligned_cols=93 Identities=11% Similarity=-0.062 Sum_probs=40.1
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~ 234 (363)
.||++++-... ...+...|.+|++..-.-.......+..+.++..+..| --|.+.+++.+.. .-.+.-+++
T Consensus 13 TGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv 86 (257)
T 3tpc_A 13 TGASSGLGAAV-TRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNAD-----VTNEADATAALAFAKQEFGHVHGLV 86 (257)
T ss_dssp ESTTSHHHHHH-HHHHHHTTCEEEEEESSCC------------CEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred eCCCCHHHHHH-HHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 45555543331 12334578888776655444455555556666666653 2355666555542 111233555
Q ss_pred EcCCCCCCCC------CCCHHHHHHHHH
Q 017967 235 HGCAHNPTGI------DPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p~NPTG~------~~s~~~~~~i~~ 256 (363)
.+-...+.+. ..+.+++++.++
T Consensus 87 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 87 NCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp ECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred ECCCCCCCCccccccccCCHHHHHHHHH
Confidence 3333333222 356788876654
No 263
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=37.07 E-value=26 Score=33.11 Aligned_cols=28 Identities=4% Similarity=0.149 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGF 274 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~ 274 (363)
+.+|++++++-|+++|+-||.|-++-..
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 6899999999999999999999998543
No 264
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=37.07 E-value=2.2e+02 Score=25.16 Aligned_cols=11 Identities=9% Similarity=0.395 Sum_probs=9.3
Q ss_pred CEEEEcCCCCc
Q 017967 178 AKVLISSPTWG 188 (363)
Q Consensus 178 d~Vlv~~P~y~ 188 (363)
|.|++..|.|.
T Consensus 111 davlv~~P~y~ 121 (307)
T 3s5o_A 111 DAAMVVTPCYY 121 (307)
T ss_dssp SEEEEECCCTT
T ss_pred CEEEEcCCCcC
Confidence 88999888885
No 265
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=36.84 E-value=1.2e+02 Score=26.21 Aligned_cols=93 Identities=17% Similarity=0.093 Sum_probs=46.9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~ 234 (363)
.||++++-... ...+...|.+|++.+-.-.......+..|.++..+..| --|.+.+++.+... -.+.-+++
T Consensus 35 TGas~gIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv 108 (277)
T 3gvc_A 35 TGAGAGIGLAV-ARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVD-----VSDEQQIIAMVDACVAAFGGVDKLV 108 (277)
T ss_dssp TTTTSTHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECC-----TTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred ECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 44544433321 12334578888877654444555555557777777663 23555555544421 01233555
Q ss_pred EcCCCCCCCC--CCCHHHHHHHHH
Q 017967 235 HGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
.+-...+.+. ..+.++++++++
T Consensus 109 nnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 109 ANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHH
Confidence 3333222222 457788776643
No 266
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=36.65 E-value=45 Score=30.16 Aligned_cols=37 Identities=11% Similarity=0.071 Sum_probs=32.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 239 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
.||.|-..+.++..++++.|+++|+-+++|--|.++.
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~w 86 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTW 86 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCC
Confidence 6788888999999999999999999999997776553
No 267
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=36.49 E-value=44 Score=30.23 Aligned_cols=38 Identities=16% Similarity=0.032 Sum_probs=32.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 238 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
-.||.|-....+++.++++.|+++|+-+++|--|.++.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 46888888899999999999999999999997776553
No 268
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=36.46 E-value=2.2e+02 Score=24.99 Aligned_cols=11 Identities=18% Similarity=0.244 Sum_probs=9.4
Q ss_pred CEEEEcCCCCc
Q 017967 178 AKVLISSPTWG 188 (363)
Q Consensus 178 d~Vlv~~P~y~ 188 (363)
|.|++..|.|.
T Consensus 104 davlv~~P~y~ 114 (297)
T 3flu_A 104 DYTLSVVPYYN 114 (297)
T ss_dssp SEEEEECCCSS
T ss_pred CEEEECCCCCC
Confidence 88999889885
No 269
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=35.43 E-value=1.6e+02 Score=25.31 Aligned_cols=93 Identities=15% Similarity=0.122 Sum_probs=48.1
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~ 234 (363)
.|+++++-... ...+...|..|++..-.-.......+..|.++..+..| --|.+.+++.+... -.+.-+++
T Consensus 33 TGas~GIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv 106 (277)
T 4dqx_A 33 TGGGSGIGRAT-AELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVD-----VSSAKDAESMVEKTTAKWGRVDVLV 106 (277)
T ss_dssp ETTTSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred ECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 45555543331 12334578888877655444455555567777777663 23556665555421 01233555
Q ss_pred EcCCCCCCC--CCCCHHHHHHHHH
Q 017967 235 HGCAHNPTG--IDPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p~NPTG--~~~s~~~~~~i~~ 256 (363)
.+-...+.+ ...+.++++++.+
T Consensus 107 ~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 107 NNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHH
Confidence 333333322 2467788876544
No 270
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=35.38 E-value=2.1e+02 Score=25.01 Aligned_cols=50 Identities=10% Similarity=0.029 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCCCCcccCCcEEEEeccch---hHHHHHHHHHHHHhCCC-CEEEEcCCCCcc
Q 017967 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSG---TGSLRLAAALIERYFPG-AKVLISSPTWGN 189 (363)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg---t~al~l~~~l~~~~~~g-d~Vlv~~P~y~~ 189 (363)
.+-|+.+.+..-..- .. |+. ..|+ .++++++ ...-.-| |.|++..|.|..
T Consensus 51 ~eEr~~v~~~~~~~~-----~g-Via--Gvg~~~t~~ai~la---~~A~~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 51 KDEKRQNLNALYDVT-----HK-LIF--QVGSLNLNDVMELV---KFSNEMDILGVSSHSPYYFP 104 (288)
T ss_dssp HHHHHHHHHHHTTTC-----SC-EEE--ECCCSCHHHHHHHH---HHHHTSCCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHh-----CC-eEE--eeCCCCHHHHHHHH---HHHHhcCCCEEEEcCCcCCC
Confidence 345556666643321 12 544 4444 4444444 2223345 899999998853
No 271
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=34.90 E-value=1.3e+02 Score=25.78 Aligned_cols=98 Identities=15% Similarity=0.103 Sum_probs=48.6
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---C
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---A 226 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~ 226 (363)
..+++ .||++++-... ...+...|..|++..-.-.......+..|.++..+..| --|.+.+++.+.. .
T Consensus 28 k~vlV---TGas~gIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 28 RKALV---TGATGGIGEAI-ARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSAN-----LSDRKSIKQLAEVAERE 98 (266)
T ss_dssp CEEEE---SSTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECC-----TTSHHHHHHHHHHHHHH
T ss_pred CEEEE---eCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEee-----cCCHHHHHHHHHHHHHH
Confidence 34544 55555543331 12334578888777655444555566667777777763 2355666555442 1
Q ss_pred CCCcEEEEEcCCCCCCC--CCCCHHHHHHHHH
Q 017967 227 PGGSFILLHGCAHNPTG--IDPTPEQWEKIAD 256 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG--~~~s~~~~~~i~~ 256 (363)
-.+.-+++.+-...+.+ ...+.++++++.+
T Consensus 99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp HTSCCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 11233555333222222 2345667665543
No 272
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=34.52 E-value=2.4e+02 Score=24.79 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=21.4
Q ss_pred CcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 229 ~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
-++++. ++|.. ||..++.+.+.+|++ -.++.=|=|..
T Consensus 127 lPiilY-n~P~~-tg~~l~~~~~~~La~---~pnIvgiKds~ 163 (297)
T 2rfg_A 127 IPIIVY-NIPPR-AVVDIKPETMARLAA---LPRIVGVKDAT 163 (297)
T ss_dssp SCEEEE-ECHHH-HSCCCCHHHHHHHHT---STTEEEEEECS
T ss_pred CCEEEE-eCccc-cCCCCCHHHHHHHHc---CCCEEEEEeCC
Confidence 344443 34432 899999988888753 23444444444
No 273
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=34.23 E-value=1.3e+02 Score=25.37 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=49.2
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---C
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---A 226 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~ 226 (363)
..+++ | |+++++-... ...+...|.+|++..-.-.......+..|.++..+..| --|.+.+++.+.. .
T Consensus 9 k~~lV--T-Gas~gIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 9 KKAIV--I-GGTHGMGLAT-VRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSD-----IADLNEIAVLGAAAGQT 79 (255)
T ss_dssp CEEEE--E-TCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEE--E-CCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEcc-----CCCHHHHHHHHHHHHHH
Confidence 34544 4 4444443321 12334578888877655444455555556677777663 2355555544432 1
Q ss_pred CCCcEEEEEcCCCCCCCC--CCCHHHHHHHHHH
Q 017967 227 PGGSFILLHGCAHNPTGI--DPTPEQWEKIADV 257 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~--~~s~~~~~~i~~~ 257 (363)
-.+.-+++++-...+.+. ..+.+++++..++
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 112334443322222221 2477888776653
No 274
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=34.19 E-value=1.7e+02 Score=25.11 Aligned_cols=93 Identities=10% Similarity=-0.001 Sum_probs=50.0
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 231 (363)
.||+.++-... ...+...|..|++.+-.-...... ++..|.++..+..| --|.+++++.+++ .-.+.-
T Consensus 13 TGas~GIG~ai-A~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~D-----vt~~~~v~~~~~~~~~~~G~iD 86 (254)
T 4fn4_A 13 TGAGSGIGRAI-AKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD-----VSKKKDVEEFVRRTFETYSRID 86 (254)
T ss_dssp ETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTSHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCCHHHHHH-HHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCC
Confidence 44555543331 123345888888866544333333 34678888888773 2355666555443 111222
Q ss_pred EEEEcCCC--CCCC--CCCCHHHHHHHHHH
Q 017967 232 ILLHGCAH--NPTG--IDPTPEQWEKIADV 257 (363)
Q Consensus 232 ~~~i~~p~--NPTG--~~~s~~~~~~i~~~ 257 (363)
+++ +|.. .+.+ ..++.++|++++++
T Consensus 87 iLV-NNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 87 VLC-NNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp EEE-ECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred EEE-ECCcccCCCCChhhCCHHHHHHHHHH
Confidence 444 5542 3334 24788999887754
No 275
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=33.48 E-value=49 Score=28.75 Aligned_cols=24 Identities=25% Similarity=0.256 Sum_probs=15.8
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEec
Q 017967 246 PTPEQWEKIADVIQEKNHIPFFDV 269 (363)
Q Consensus 246 ~s~~~~~~i~~~~~~~~~~ii~De 269 (363)
++.++++++++.|++.|+.+++|-
T Consensus 134 l~~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 134 LTAEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEe
Confidence 455667777777777776666653
No 276
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=33.01 E-value=1.3e+02 Score=21.33 Aligned_cols=71 Identities=13% Similarity=0.072 Sum_probs=38.1
Q ss_pred CCC-CEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHH
Q 017967 175 FPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (363)
Q Consensus 175 ~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~ 253 (363)
..| ..|.+.+..-.... .+...|+.+...+. .+.+.+++.+. +.-+++.+.|.. .-..
T Consensus 26 ~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~d~-------~~~~~~~~~~~----~~d~vi~~~~~~---------~~~~ 84 (118)
T 3ic5_A 26 TSSNYSVTVADHDLAALA-VLNRMGVATKQVDA-------KDEAGLAKALG----GFDAVISAAPFF---------LTPI 84 (118)
T ss_dssp HCSSEEEEEEESCHHHHH-HHHTTTCEEEECCT-------TCHHHHHHHTT----TCSEEEECSCGG---------GHHH
T ss_pred hCCCceEEEEeCCHHHHH-HHHhCCCcEEEecC-------CCHHHHHHHHc----CCCEEEECCCch---------hhHH
Confidence 356 56666655433222 23345555544332 35677777765 233555444321 2356
Q ss_pred HHHHHHhcCCeEE
Q 017967 254 IADVIQEKNHIPF 266 (363)
Q Consensus 254 i~~~~~~~~~~ii 266 (363)
+++.|.+.++..+
T Consensus 85 ~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 85 IAKAAKAAGAHYF 97 (118)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHhCCCEE
Confidence 7888888887655
No 277
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=32.43 E-value=2.3e+02 Score=24.05 Aligned_cols=94 Identities=15% Similarity=0.040 Sum_probs=47.9
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc--CCCCcEEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA--APGGSFILL 234 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~ 234 (363)
..||++++-... ...+...|.+|++..-.-.......+..+.++..+.+| --|.+.+++.+.. .-.+.-+++
T Consensus 35 VTGas~GIG~ai-a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 35 VSGGAGGLGEAT-VRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTN-----VTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC-----TTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcC-----CCCHHHHHHHHHHHHHhCCCCeEE
Confidence 345555543331 12334578888877654444455555567777777663 2355666555543 111233444
Q ss_pred EcCC-CCCCC-------CCCCHHHHHHHHH
Q 017967 235 HGCA-HNPTG-------IDPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p-~NPTG-------~~~s~~~~~~i~~ 256 (363)
+++. ..+.+ ...+.+++++..+
T Consensus 109 ~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 109 VAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp ECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred EccCcccccccccccccccCCHHHHHHHHH
Confidence 4312 22222 2467777776654
No 278
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=32.06 E-value=1.5e+02 Score=23.42 Aligned_cols=57 Identities=7% Similarity=-0.069 Sum_probs=37.1
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~ 262 (363)
.++..|.+++.+.. ...++.+.+.+.+... .++.++.-.. ...+.+.++++.+++.+
T Consensus 41 ~l~~~G~eVi~lG~------~~p~e~lv~aa~~~~~--diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 41 ALRDAGFEVVYTGL------RQTPEQVAMAAVQEDV--DVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHTTCEEECCCS------BCCHHHHHHHHHHTTC--SEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCEEEECCC------CCCHHHHHHHHHhcCC--CEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 46778888887754 3578888887776432 2344333222 24678888988888764
No 279
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.94 E-value=1.5e+02 Score=25.29 Aligned_cols=102 Identities=14% Similarity=0.143 Sum_probs=48.5
Q ss_pred cccCCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEEecccCCCCCCCHHHHHH
Q 017967 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (363)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (363)
.+....+++ | ||++++-... ...+...|.+|++..-.-.. ....++..|.++..+..| --|.+.+++
T Consensus 26 ~l~~k~vlI--T-Gas~gIG~~l-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~ 96 (271)
T 4iin_A 26 QFTGKNVLI--T-GASKGIGAEI-AKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFD-----AASESDFIE 96 (271)
T ss_dssp CCSCCEEEE--T-TCSSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHH
T ss_pred ccCCCEEEE--E-CCCcHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC-----CCCHHHHHH
Confidence 344455655 4 5555543321 12334578777665432222 222344567777777763 235555555
Q ss_pred HHHc---CCCCcEEEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 222 DIKA---APGGSFILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 222 ~l~~---~~~~~~~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
.+.+ ...+.-+++.+-.-.+.+. ..+.++++++.+
T Consensus 97 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 97 AIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 5442 1112334553333222222 356777776544
No 280
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=31.89 E-value=1e+02 Score=29.93 Aligned_cols=78 Identities=9% Similarity=-0.086 Sum_probs=47.3
Q ss_pred CCCEEEEcCCCCcchHH-------HHhhCCCCeEEEec-ccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCC
Q 017967 176 PGAKVLISSPTWGNHKN-------IFNDARVPWSEYRY-YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (363)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~-------~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s 247 (363)
+||.|++.+...++... -+...|++++.-.. .-.-....+-+++...++.-. +..++..+. .
T Consensus 323 ~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~--Pk~~ipvHG--------e 392 (555)
T 3zq4_A 323 PGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIK--PKFFMPIHG--------E 392 (555)
T ss_dssp TTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSC--EEEEEEESB--------C
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhC--CCEEEEcCC--------C
Confidence 68999999987766552 23567887764100 001245678899998887642 333332221 2
Q ss_pred HHHHHHHHHHHHhcCC
Q 017967 248 PEQWEKIADVIQEKNH 263 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~ 263 (363)
...+.+.++++++.|+
T Consensus 393 ~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 393 YRMQKMHVKLATDCGI 408 (555)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 4567777788887654
No 281
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=30.91 E-value=30 Score=35.03 Aligned_cols=28 Identities=14% Similarity=0.322 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGF 274 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~ 274 (363)
+.++++++++.|+++|+-||.|-+|-..
T Consensus 253 ~~~efk~lV~~~H~~Gi~VilDvV~NH~ 280 (714)
T 2ya0_A 253 RIAEFKNLINEIHKRGMGAILDVVYNHT 280 (714)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred hHHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 3799999999999999999999998644
No 282
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=30.25 E-value=1.6e+02 Score=26.82 Aligned_cols=135 Identities=12% Similarity=0.147 Sum_probs=61.7
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (363)
..|.+.|-+.+ +..| +.+.+++.+....|+|=..++..+...+ ..|..|++.+.........++..|+....
T Consensus 56 ~TG~~~LD~~L-----g~GG--l~~G~li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~~~~a~~~g~d~~~ 128 (366)
T 1xp8_A 56 STGSLSLDLAL-----GVGG--IPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDE 128 (366)
T ss_dssp CCSCHHHHHHT-----SSSS--EETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGG
T ss_pred cCCCHHHHHHh-----CCCC--ccCCcEEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChhHHHHHHcCCCHHH
Confidence 45666665543 1112 2356666655555555555554433322 25555555544333223345667765432
Q ss_pred EecccCCCCCCCHHHHHHHHHc--CCCCcEEEEEcCCCCCCC-CCCC---------------HHHHHHHHHHHHhcCCeE
Q 017967 204 YRYYDPKTVGLDFEGMIADIKA--APGGSFILLHGCAHNPTG-IDPT---------------PEQWEKIADVIQEKNHIP 265 (363)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~i~~p~NPTG-~~~s---------------~~~~~~i~~~~~~~~~~i 265 (363)
+.+.+. .+.+.+.+.+.. ...+..+++|-+...-.. ..+. .+.+++|..+++++++.+
T Consensus 129 l~i~~~----~~~e~~l~~l~~l~~~~~~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~~~~V 204 (366)
T 1xp8_A 129 LLVSQP----DNGEQALEIMELLVRSGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAA 204 (366)
T ss_dssp CEEECC----SSHHHHHHHHHHHHTTTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEE
T ss_pred ceeecC----CcHHHHHHHHHHHHhcCCCCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 222222 134544443321 112344555555544332 1110 123455556678888755
Q ss_pred E-EecC
Q 017967 266 F-FDVA 270 (363)
Q Consensus 266 i-~De~ 270 (363)
| ....
T Consensus 205 I~~nq~ 210 (366)
T 1xp8_A 205 IFINQV 210 (366)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 5 4444
No 283
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=30.25 E-value=2.5e+02 Score=23.79 Aligned_cols=93 Identities=15% Similarity=0.043 Sum_probs=47.9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~ 234 (363)
.||++++-... ...+...|.+|++.+-.-.......+..|.++..+..| --|.+.+++.+.. .-.+.-+++
T Consensus 17 TGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv 90 (271)
T 3tzq_B 17 TGACGGIGLET-SRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVD-----LTNEVSVRALIDFTIDTFGRLDIVD 90 (271)
T ss_dssp ETTTSHHHHHH-HHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred ECCCcHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 45555543321 12334578888877665556666666667777777653 2355666555542 101233454
Q ss_pred EcCCCC-C-CC--CCCCHHHHHHHHH
Q 017967 235 HGCAHN-P-TG--IDPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p~N-P-TG--~~~s~~~~~~i~~ 256 (363)
.+-... + .+ ..++.+++++..+
T Consensus 91 ~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 91 NNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp ECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred ECCCCCCCCCCccccCCHHHHHHHHH
Confidence 333322 2 11 1457788776554
No 284
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=30.21 E-value=1.9e+02 Score=24.54 Aligned_cols=92 Identities=10% Similarity=0.016 Sum_probs=47.5
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~ 234 (363)
.||++.+-... ...+...|.+|++..-.-..........+.++..+..| --|.+.+++.+.+. -.+.-+++
T Consensus 11 TGas~gIG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv 84 (281)
T 3m1a_A 11 TGASSGFGRAI-AEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLD-----VTDGERIDVVAADVLARYGRVDVLV 84 (281)
T ss_dssp TTTTSHHHHHH-HHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred ECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEee-----CCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 55555543331 12334578888877666566666666666677766653 23556666555421 01223555
Q ss_pred EcCCCCCCCC--CCCHHHHHHHH
Q 017967 235 HGCAHNPTGI--DPTPEQWEKIA 255 (363)
Q Consensus 235 i~~p~NPTG~--~~s~~~~~~i~ 255 (363)
++-...+.+. ..+.++++++.
T Consensus 85 ~~Ag~~~~~~~~~~~~~~~~~~~ 107 (281)
T 3m1a_A 85 NNAGRTQVGAFEETTERELRDLF 107 (281)
T ss_dssp ECCCCEEECCTTTCCHHHHHHHH
T ss_pred ECCCcCCCCChhhCCHHHHHHHH
Confidence 3333222222 45667665544
No 285
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=30.16 E-value=2.4e+02 Score=23.67 Aligned_cols=93 Identities=18% Similarity=0.100 Sum_probs=46.4
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~ 234 (363)
.|+++++-... ...+...|.+|++.+-.-..........+.++..+..| --|.+.+++.+.+ .-.+.-+++
T Consensus 14 TGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv 87 (259)
T 4e6p_A 14 TGSARGIGRAF-AEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMD-----VTRQDSIDAAIAATVEHAGGLDILV 87 (259)
T ss_dssp ETCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC-----TTCHHHHHHHHHHHHHHSSSCCEEE
T ss_pred ECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEee-----CCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 44555543321 12334578888877655444555555556666666653 2355666555542 111233555
Q ss_pred EcCCCCCCC--CCCCHHHHHHHHH
Q 017967 235 HGCAHNPTG--IDPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p~NPTG--~~~s~~~~~~i~~ 256 (363)
++-...+.+ ...+.++++++.+
T Consensus 88 ~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 88 NNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHH
Confidence 333332222 2346777775443
No 286
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=30.05 E-value=68 Score=26.18 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=42.0
Q ss_pred HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE
Q 017967 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (363)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 265 (363)
..+++..|..++...++..+-...+.+.+.+.+....++.+++++..+. .+.+-+.+|++..+++|.-+
T Consensus 111 ~~~~~~~G~~~v~w~~d~~Dw~~~~~~~i~~~~~~~~~g~IiL~Hd~~~------~t~~al~~ii~~l~~~Gy~~ 179 (195)
T 2cc0_A 111 RSVEAKYGLTEVIWDVDSQDWNNASTDAIVQAVSRLGNGQVILMHDWPA------NTLAAIPRIAQTLAGKGLCS 179 (195)
T ss_dssp HHHHHHTTCEECCCSEECCGGGTCCHHHHHHHHHTCCTTCEEEEESSCH------HHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHCCCeEEEeccCCCccCCCCHHHHHHHHhCcCcCeEEEECCCch------hHHHHHHHHHHHHHHCCCEE
Confidence 3455567776654444322112356777777776555566666654321 25678999999999988543
No 287
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=29.89 E-value=31 Score=24.41 Aligned_cols=22 Identities=9% Similarity=-0.014 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhcCCeEEEecC
Q 017967 249 EQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 249 ~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.--.+|.++++++|+.+++|..
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHH
Confidence 3456788889999999999875
No 288
>2gm5_A Transposon gamma-delta resolvase; site specific recombination, recombin; 2.10A {Escherichia coli} PDB: 2rsl_A 1gdr_A 1ght_A 1hx7_A
Probab=29.23 E-value=1.4e+02 Score=22.82 Aligned_cols=47 Identities=11% Similarity=0.060 Sum_probs=27.3
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEE
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 267 (363)
..|.+.+....++..+++ .. ..=..-+..++..+++.++++|+-+++
T Consensus 45 p~l~~ll~~~~~gd~lvV-~~---ldRL~R~~~d~~~~~~~l~~~gv~l~~ 91 (139)
T 2gm5_A 45 KGLDLLRMKVKEGDVILV-KK---LDHLGRDTADMIQLIKEFDAQGVSIRF 91 (139)
T ss_dssp HHHHHHHHHCCTTCEEEE-SS---GGGTSSSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEE-Ee---cccccCCHHHHHHHHHHHHhCCCEEEE
Confidence 445555544334443333 33 222223567888888889999987765
No 289
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=28.81 E-value=33 Score=33.47 Aligned_cols=73 Identities=8% Similarity=0.033 Sum_probs=43.4
Q ss_pred HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCC--CCcEE-EEEc--CCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP--GGSFI-LLHG--CAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 194 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~--~~~~~-~~i~--~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
+..+++++..+.+.|+..|.+.++.+-+.-.... ..+.+ -.-+ .-..|.|-.||.+|+++|++.|++++|-||
T Consensus 164 MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 241 (543)
T 3rcn_A 164 MAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHITVI 241 (543)
T ss_dssp HHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCEEe
Confidence 3466778877777555556665555444322100 00000 0000 012345778999999999999999998887
No 290
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=28.57 E-value=3e+02 Score=24.10 Aligned_cols=47 Identities=11% Similarity=0.011 Sum_probs=31.1
Q ss_pred CHHHHHHHHHcCCCCcE-EEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecCC
Q 017967 215 DFEGMIADIKAAPGGSF-ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY 271 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~-~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~y 271 (363)
-.+.++++++. +.. ++++ .+|. +.++.++|.+.|+++++.++-.++.
T Consensus 83 ~~~~v~ea~~~---Gi~~vVi~-----t~G~--~~~~~~~l~~~A~~~gi~viGPNc~ 130 (294)
T 2yv1_A 83 AKDAVFEAIDA---GIELIVVI-----TEHI--PVHDTMEFVNYAEDVGVKIIGPNTP 130 (294)
T ss_dssp HHHHHHHHHHT---TCSEEEEC-----CSCC--CHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHHHHC---CCCEEEEE-----CCCC--CHHHHHHHHHHHHHcCCEEEcCCCc
Confidence 35566666653 333 3432 3343 5778899999999999988877763
No 291
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=28.51 E-value=40 Score=31.75 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++-|+++|+-||.|-++-....
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 489999999999999999999999865543
No 292
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=28.40 E-value=2.1e+02 Score=22.35 Aligned_cols=61 Identities=16% Similarity=0.060 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHH-HHhcCCe-EEEecCCCCC
Q 017967 212 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADV-IQEKNHI-PFFDVAYQGF 274 (363)
Q Consensus 212 ~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~-~~~~~~~-ii~De~y~~~ 274 (363)
...+.+.|.+.+++ ..+..+++..|-|..|..-.. .+.+.++.. +++.++. .++||.|...
T Consensus 40 ~~~~~~~l~~li~~--~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~ 103 (150)
T 1vhx_A 40 GDYGLSRLSELIKD--YTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTM 103 (150)
T ss_dssp TBCCHHHHHHHHTT--SEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHH
T ss_pred hHHHHHHHHHHHHH--cCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHH
Confidence 45678999998885 346677778887776665322 223555533 3445754 5579997543
No 293
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.36 E-value=1.5e+02 Score=25.38 Aligned_cols=59 Identities=12% Similarity=0.045 Sum_probs=31.8
Q ss_pred HhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHH
Q 017967 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADV 257 (363)
Q Consensus 194 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~ 257 (363)
++..|.++..+.+| --|.+.+++.+.+. -.+.-+++++-...+.+...+.+++++..++
T Consensus 66 ~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 66 VEKTGRKAYTAEVD-----VRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHTTSCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHhcCCceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 34567777777763 23556665554421 0123355544444444445778888876643
No 294
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=28.31 E-value=1.9e+02 Score=28.02 Aligned_cols=79 Identities=13% Similarity=0.030 Sum_probs=48.2
Q ss_pred CCCCEEEEcCCCCcchH-------HHHhhCCCCeEEEecc-cCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCC
Q 017967 175 FPGAKVLISSPTWGNHK-------NIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP 246 (363)
Q Consensus 175 ~~gd~Vlv~~P~y~~~~-------~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~ 246 (363)
.++|.|++....+++.. ..+...|++++..... -.-...-|.+++...++.-.++.++.+ + |
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipv--H-----G--- 406 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPW--H-----G--- 406 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEE--S-----B---
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEE--c-----C---
Confidence 58899999998777653 2344678887643210 012356788888888765333333333 2 1
Q ss_pred CHHHHHHHHHHHHhcCC
Q 017967 247 TPEQWEKIADVIQEKNH 263 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~ 263 (363)
....+.++.+++++.++
T Consensus 407 e~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 407 EVRHQMNFKWLAESMSR 423 (562)
T ss_dssp CHHHHHHHHHHHHTSSS
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 24566777788887664
No 295
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=27.95 E-value=2e+02 Score=25.66 Aligned_cols=10 Identities=20% Similarity=0.378 Sum_probs=5.3
Q ss_pred CEEEEcCCCC
Q 017967 178 AKVLISSPTW 187 (363)
Q Consensus 178 d~Vlv~~P~y 187 (363)
|.|+|..|..
T Consensus 69 D~V~i~tp~~ 78 (352)
T 3kux_A 69 DLIVIPTPND 78 (352)
T ss_dssp CEEEECSCTT
T ss_pred CEEEEeCChH
Confidence 5555555544
No 296
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.91 E-value=2.7e+02 Score=23.33 Aligned_cols=92 Identities=9% Similarity=-0.021 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 231 (363)
.|+++++-... ...+...|.+|++..-.-...... ++..|.++..+.+| --|.+.+++.+.. . .+.-
T Consensus 13 TGas~GIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~-g~id 85 (252)
T 3h7a_A 13 IGAGDYIGAEI-AKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD-----ARNEDEVTAFLNAADAH-APLE 85 (252)
T ss_dssp ECCSSHHHHHH-HHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHH-SCEE
T ss_pred ECCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECc-----CCCHHHHHHHHHHHHhh-CCce
Confidence 45555543331 123345788887766544444333 34457777777763 2355555554432 2 2334
Q ss_pred EEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 232 ILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 232 ~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
+++.+-...+.+. ..+.++++++.+
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 86 VTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5553333333222 356777776554
No 297
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=27.73 E-value=85 Score=27.31 Aligned_cols=79 Identities=6% Similarity=-0.028 Sum_probs=50.5
Q ss_pred EEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Q 017967 179 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (363)
Q Consensus 179 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~ 258 (363)
.|++....|.+....++...- .+.+|+. ..+|-+|+-++.++-.- .-.. ++++.. +++.++++++++.|
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~-~v~lPvL-rKDFiid~yQI~eAr~~-GADa-ILLI~a-------~L~~~~l~~l~~~A 149 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIAS-SVSIPIL-MSDFIVKESQIDDAYNL-GADT-VLLIVK-------ILTERELESLLEYA 149 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHT-TCSSCEE-EESCCCSHHHHHHHHHH-TCSE-EEEEGG-------GSCHHHHHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHHH-hcCCCEe-eccccccHHHHHHHHHc-CCCe-eehHHh-------hcCHHHHHHHHHHH
Confidence 467777777776665542211 1223432 24688999888876542 2234 444443 46789999999999
Q ss_pred HhcCCeEEEe
Q 017967 259 QEKNHIPFFD 268 (363)
Q Consensus 259 ~~~~~~ii~D 268 (363)
++.|+-+++.
T Consensus 150 ~~lGl~~LvE 159 (258)
T 4a29_A 150 RSYGMEPLIL 159 (258)
T ss_dssp HHTTCCCEEE
T ss_pred HHHhHHHHHh
Confidence 9999877763
No 298
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=27.49 E-value=2.6e+02 Score=23.37 Aligned_cols=66 Identities=9% Similarity=-0.091 Sum_probs=35.7
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
..+++ .|+++++-... ...+...|.+|++..-.-.......+..+.++..+.+| --|.+.+++.++
T Consensus 10 k~vlI---TGas~gIG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~ 75 (261)
T 3n74_A 10 KVALI---TGAGSGFGEGM-AKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAAD-----ISKEADVDAAVE 75 (261)
T ss_dssp CEEEE---ETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC-----TTSHHHHHHHHH
T ss_pred CEEEE---ECCCchHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEec-----CCCHHHHHHHHH
Confidence 34544 45555433321 12334578888777655455555555667777777663 234555555544
No 299
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=27.18 E-value=36 Score=31.35 Aligned_cols=69 Identities=10% Similarity=0.030 Sum_probs=38.9
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
.+..+++++..+.+.|+.+|.+..+.+-+..... ..+ .+- + ..+.+-.+|++|+++|++.|++++|-||
T Consensus 41 ~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g--~~~--~-~~~~~g~YT~~di~eiv~YA~~rgI~VI 112 (367)
T 1yht_A 41 TISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDG--IYI--N-PYTGKPFLSYRQLDDIKAYAKAKGIELI 112 (367)
T ss_dssp HHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTS--CEE--C-TTTCCEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCC--CcC--C-CCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 3446677777777655445555433221100000 000 111 1 1222456999999999999999998887
No 300
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=26.83 E-value=57 Score=30.54 Aligned_cols=31 Identities=3% Similarity=0.131 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
+.++++++++.|+++|+-||.|-++-....+
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~~~ 98 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTGFL 98 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCcccCc
Confidence 4899999999999999999999998776643
No 301
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=26.31 E-value=2.8e+02 Score=23.60 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=48.8
Q ss_pred cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CC
Q 017967 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---AP 227 (363)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~ 227 (363)
.+++ |.|+ .++-... ...+...|.+|++.+-.-..... +...+.++..+..| --|.+.+++.+.+ .-
T Consensus 4 ~vlV--TGas-~GIG~ai-a~~la~~Ga~V~~~~~~~~~~~~-~~~~~~~~~~~~~D-----v~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 4 GVIV--TGGG-HGIGKQI-CLDFLEAGDKVCFIDIDEKRSAD-FAKERPNLFYFHGD-----VADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEE--ESTT-SHHHHHH-HHHHHHTTCEEEEEESCHHHHHH-HHTTCTTEEEEECC-----TTSHHHHHHHHHHHHHHH
T ss_pred EEEE--ecCC-CHHHHHH-HHHHHHCCCEEEEEeCCHHHHHH-HHHhcCCEEEEEec-----CCCHHHHHHHHHHHHHHc
Confidence 3444 5444 4433321 23335588888887644333332 33445677777663 2345555554432 11
Q ss_pred CCcEEEEEcCCCCCCCC--CCCHHHHHHHHHH
Q 017967 228 GGSFILLHGCAHNPTGI--DPTPEQWEKIADV 257 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~--~~s~~~~~~i~~~ 257 (363)
.+.-+++.+-..++.+. .++.++|++++++
T Consensus 74 g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 74 QRIDVLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp SCCCEEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 12334553333343332 4578999888764
No 302
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=26.16 E-value=80 Score=27.80 Aligned_cols=71 Identities=10% Similarity=0.003 Sum_probs=40.5
Q ss_pred CcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 187 WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 187 y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
|..+.++.+...+.++.+-+.. ..-.+.++++++. ....+++++ +| ++.++.+++.+.|+++++.++
T Consensus 53 y~sl~el~~~~~~D~viI~tP~----~~~~~~~~ea~~~--Gi~~iVi~t-----~G--~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 53 FNTVREAVAATGATASVIYVPA----PFCKDSILEAIDA--GIKLIITIT-----EG--IPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp ESSHHHHHHHHCCCEEEECCCG----GGHHHHHHHHHHT--TCSEEEECC-----CC--CCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCHHHHhhcCCCCEEEEecCH----HHHHHHHHHHHHC--CCCEEEEEC-----CC--CCHHHHHHHHHHHHHcCCEEE
Confidence 4444555543345544443211 2345667776663 223334322 24 357788899999999999887
Q ss_pred EecC
Q 017967 267 FDVA 270 (363)
Q Consensus 267 ~De~ 270 (363)
-.++
T Consensus 120 GPNc 123 (288)
T 2nu8_A 120 GPNT 123 (288)
T ss_dssp CSSC
T ss_pred ecCC
Confidence 6665
No 303
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=25.91 E-value=51 Score=31.66 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++-|+++|+-||.|-+|-...
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHts 106 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHTS 106 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCCc
Confidence 58999999999999999999999986543
No 304
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=25.87 E-value=1.8e+02 Score=24.22 Aligned_cols=93 Identities=16% Similarity=0.006 Sum_probs=43.7
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCcEEEE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 234 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~ 234 (363)
.||++++-... ...+...|.+|++..-.-.......+..+.++..+..| --|.+.+++.+... -.+.-+++
T Consensus 9 TGas~GIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 9 TGAGSGLGRAL-TIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVAD-----LAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp ESTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECC-----TTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred ECCCCHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECC-----CCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 45555543331 12334578888776654444444444434456666552 12555555544421 01223454
Q ss_pred EcCCCCCCCC--CCCHHHHHHHHH
Q 017967 235 HGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 235 i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
.+-...+.+. ..+.++++++++
T Consensus 83 nnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 83 HCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp EECCCC------CCCHHHHHHHHH
T ss_pred ECCCCCCCCChHhCCHHHHHHHHH
Confidence 3333322222 357788877654
No 305
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=25.63 E-value=62 Score=29.94 Aligned_cols=29 Identities=7% Similarity=0.129 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++.|+++|+-||.|-++-...
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 58999999999999999999999986544
No 306
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=25.61 E-value=2.4e+02 Score=24.13 Aligned_cols=94 Identities=15% Similarity=0.054 Sum_probs=46.9
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEE
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFIL 233 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~ 233 (363)
..||++++-... ...+...|.+|++..-.-.......+..+.++..+..| --|.+.+++.+.. .-.+.-++
T Consensus 33 VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 33 VTGAGSGVGRAV-AVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTD-----VTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp ETTTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EeCCCcHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEE
Confidence 355655544331 12334578888777654444555555556666666653 2355666555542 10123344
Q ss_pred EEcCCCC-CCC--CCCCHHHHHHHHH
Q 017967 234 LHGCAHN-PTG--IDPTPEQWEKIAD 256 (363)
Q Consensus 234 ~i~~p~N-PTG--~~~s~~~~~~i~~ 256 (363)
+.+-.-. +.+ ..++.++++++++
T Consensus 107 VnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 107 FNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp EECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHH
Confidence 4332221 212 1356777776553
No 307
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=25.58 E-value=3e+02 Score=23.17 Aligned_cols=96 Identities=11% Similarity=0.066 Sum_probs=43.8
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---C
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---A 226 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~ 226 (363)
..+++ .||++++-... ...+...|..|++..-.-......+...++..+..++ -|.+.+++.+.. .
T Consensus 28 k~vlV---TGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~ 96 (260)
T 3gem_A 28 APILI---TGASQRVGLHC-ALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDF-------SCETGIMAFIDLLKTQ 96 (260)
T ss_dssp CCEEE---SSTTSHHHHHH-HHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCT-------TSHHHHHHHHHHHHHH
T ss_pred CEEEE---ECCCCHHHHHH-HHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCC-------CCHHHHHHHHHHHHHh
Confidence 45555 45555543331 1223447877766654433444445555644444333 245555554432 1
Q ss_pred CCCcEEEEEcCCCC-CCCCCCCHHHHHHHHH
Q 017967 227 PGGSFILLHGCAHN-PTGIDPTPEQWEKIAD 256 (363)
Q Consensus 227 ~~~~~~~~i~~p~N-PTG~~~s~~~~~~i~~ 256 (363)
-.+.-+++.+-... +.....+.++++++++
T Consensus 97 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 97 TSSLRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp CSCCSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 11233444333222 2223455666666554
No 308
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=25.53 E-value=53 Score=31.17 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++-|+++|+-||.|-++-...
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 48999999999999999999999986553
No 309
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=25.10 E-value=55 Score=31.11 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++.|+++|+-||.|-++-...
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 48999999999999999999999986553
No 310
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.00 E-value=43 Score=24.30 Aligned_cols=22 Identities=14% Similarity=-0.050 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhcCCeEEEecC
Q 017967 249 EQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 249 ~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.--.+|.++++++|+.+++|..
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHHHcCCCEEECHH
Confidence 4557788899999999999865
No 311
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=24.94 E-value=55 Score=31.09 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++.|+++|+-||.|-++-...
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 48999999999999999999999986553
No 312
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=24.63 E-value=4.2e+02 Score=24.53 Aligned_cols=27 Identities=7% Similarity=-0.198 Sum_probs=16.2
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
.++..|.++..+..| --|.+.+++.+.
T Consensus 103 ~~~~~G~~a~~i~~D-----vtd~~~v~~~v~ 129 (405)
T 3zu3_A 103 FAAQKGLYAKSINGD-----AFSDEIKQLTID 129 (405)
T ss_dssp HHHHTTCCEEEEESC-----TTSHHHHHHHHH
T ss_pred HHHhcCCceEEEECC-----CCCHHHHHHHHH
Confidence 455678888877763 235555555443
No 313
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=24.60 E-value=2.4e+02 Score=25.11 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=37.6
Q ss_pred CCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE
Q 017967 186 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (363)
Q Consensus 186 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 265 (363)
.|..+..++....+.++.+-+.. ..-.+...++++. ++-+++ -.|.+ .+.++.++|++.++++++.+
T Consensus 54 ~~~~~~~~l~~~~~D~V~i~tp~----~~h~~~~~~al~~---gk~vl~----EKP~~--~~~~~~~~l~~~a~~~~~~~ 120 (354)
T 3db2_A 54 GDATMEALLAREDVEMVIITVPN----DKHAEVIEQCARS---GKHIYV----EKPIS--VSLDHAQRIDQVIKETGVKF 120 (354)
T ss_dssp CCSSHHHHHHCSSCCEEEECSCT----TSHHHHHHHHHHT---TCEEEE----ESSSC--SSHHHHHHHHHHHHHHCCCE
T ss_pred CcCCHHHHhcCCCCCEEEEeCCh----HHHHHHHHHHHHc---CCEEEE----ccCCC--CCHHHHHHHHHHHHHcCCeE
Confidence 35556666655556665554411 2234444555542 222333 23433 35667777777777777766
Q ss_pred EEecC
Q 017967 266 FFDVA 270 (363)
Q Consensus 266 i~De~ 270 (363)
.+...
T Consensus 121 ~v~~~ 125 (354)
T 3db2_A 121 LCGHS 125 (354)
T ss_dssp EEECG
T ss_pred EEeec
Confidence 66444
No 314
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=24.60 E-value=49 Score=34.98 Aligned_cols=28 Identities=18% Similarity=0.352 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 248 PEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
.++++++++.|+++|+-+|.|-+|..+.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 6999999999999999999999986543
No 315
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=24.37 E-value=57 Score=31.36 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++.|+++|+-||.|-++....
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 58999999999999999999999986553
No 316
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=24.17 E-value=68 Score=30.31 Aligned_cols=30 Identities=10% Similarity=0.131 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++-|+++|+-||.|-++.....
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~~ 124 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTGR 124 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 379999999999999999999999876553
No 317
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=24.16 E-value=3.3e+02 Score=23.10 Aligned_cols=93 Identities=12% Similarity=0.088 Sum_probs=46.2
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH---hhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 231 (363)
.||++++-... ...+...|..|++..-.-....... +..|.++..+..| --|.+.+++.+.. .-.+.-
T Consensus 32 TGas~gIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 32 TGSSRGLGRAM-AEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD-----VTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp TTCSSHHHHHH-HHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC-----TTCHHHHHHHHHHHHHHTCCCC
T ss_pred eCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCC
Confidence 45555543321 1233457888888765444333333 3456677766653 2355666555542 111233
Q ss_pred EEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 232 ILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 232 ~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
+++.+-.-.+.+. ..+.++++++.+
T Consensus 106 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 106 ILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 5553333222222 357788876654
No 318
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=24.13 E-value=4.3e+02 Score=24.60 Aligned_cols=133 Identities=21% Similarity=0.233 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcC-CCCcccCCcEEEEeccchhHHHHHHHHHHHHhC-CCCEEEEcCC-CCcc-hHHH----HhhCCCCeE
Q 017967 131 FNKVTAELLFGA-DNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISSP-TWGN-HKNI----FNDARVPWS 202 (363)
Q Consensus 131 lr~aia~~l~~~-~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~~-~gd~Vlv~~P-~y~~-~~~~----~~~~G~~~~ 202 (363)
+.+.+...+... ....+++.+++.+...+|.|=..++..+...+. .|.+|++.+. .|.+ .... .+..|+.+.
T Consensus 78 v~~~L~~~~~~~~~~i~l~~~~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r~aa~~qL~~~~~~~gv~v~ 157 (425)
T 2ffh_A 78 VYEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVL 157 (425)
T ss_dssp HHHHHHHHTTSSCCCCCCCSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhCCCcccccCCCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccCchhHHHHHHhcccCCccEE
Confidence 444454554322 122222345555445666655545444443333 4555555443 3322 2221 224555554
Q ss_pred EEecccCCCCCCCHHHH-HHHHHcC--CCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 203 EYRYYDPKTVGLDFEGM-IADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 203 ~v~~~~~~~~~~d~~~l-~~~l~~~--~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.... +.++..+ .+.+... ..-.++++-+.|..... ....+++.++.+.+....+++++|..
T Consensus 158 ~~~~------~~~p~~i~~~~l~~~~~~~~DvVIIDTaG~l~~d-~~l~~el~~i~~~~~pd~vlLVvDa~ 221 (425)
T 2ffh_A 158 EVMD------GESPESIRRRVEEKARLEARDLILVDTAGRLQID-EPLMGELARLKEVLGPDEVLLVLDAM 221 (425)
T ss_dssp ECCT------TCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCC-HHHHHHHHHHHHHHCCSEEEEEEEGG
T ss_pred ecCC------CCCHHHHHHHHHHHHHHCCCCEEEEcCCCccccc-HHHHHHHHHhhhccCCceEEEEEecc
Confidence 3221 2455544 3333321 12234555333332220 00123444455544455677888864
No 319
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=23.96 E-value=59 Score=30.78 Aligned_cols=29 Identities=14% Similarity=0.306 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++-|+++|+-||.|-++....
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 48999999999999999999999986554
No 320
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=23.94 E-value=2.1e+02 Score=24.09 Aligned_cols=74 Identities=12% Similarity=0.083 Sum_probs=45.8
Q ss_pred CCCCEEEEcCCC--CcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHH
Q 017967 175 FPGAKVLISSPT--WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 252 (363)
Q Consensus 175 ~~gd~Vlv~~P~--y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~ 252 (363)
.+|.+|+++... -......++..|+++..+++|....-..+.+.+.+.+.... .-++++. |..-++
T Consensus 131 ~~~~~vL~~rg~~~r~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~--~d~v~ft----------S~s~v~ 198 (254)
T 4es6_A 131 VHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAER--LNGLVVS----------SGQGLQ 198 (254)
T ss_dssp SSSCEEEEEECSSCCCHHHHHHHHTTCEEEEEECEEEECCCCCTTHHHHHHHHTT--CCEEECC----------SHHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHHHCCCEEEEEeEEEeeCCCCCHHHHHHHHHhCC--CCEEEEc----------CHHHHH
Confidence 478898887753 34456778889999999988754322334556666665322 2234433 345677
Q ss_pred HHHHHHHh
Q 017967 253 KIADVIQE 260 (363)
Q Consensus 253 ~i~~~~~~ 260 (363)
.+.+.+.+
T Consensus 199 ~~~~~~~~ 206 (254)
T 4es6_A 199 NLYQLAAA 206 (254)
T ss_dssp HHHHHHGG
T ss_pred HHHHHhhH
Confidence 77766653
No 321
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=23.79 E-value=1.8e+02 Score=24.32 Aligned_cols=110 Identities=13% Similarity=0.074 Sum_probs=54.6
Q ss_pred EEeccchhHHHHHHHHHHHHh-CCCCEEEEcCCC--CcchHHHHhhCCCCeEEE-ecccCCCCCCCHHHHHHHHHcCCCC
Q 017967 154 TVQGLSGTGSLRLAAALIERY-FPGAKVLISSPT--WGNHKNIFNDARVPWSEY-RYYDPKTVGLDFEGMIADIKAAPGG 229 (363)
Q Consensus 154 ~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~--y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (363)
+..+-||.|-..++..+...+ ..|.+|++.+.. .+..... +|...... .+.+--... ..+.+.+...+..
T Consensus 7 v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~~~~~~---lg~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~ 80 (260)
T 3q9l_A 7 VTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLI---MGCERRVVYDFVNVIQGD---ATLNQALIKDKRT 80 (260)
T ss_dssp EECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSSCCHHHH---TTCGGGCCSCHHHHHTTS---SCHHHHCEECSSS
T ss_pred EECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCCCCCChhHH---hCCCCcccCCHHHHhcCC---CChHHheeccCCC
Confidence 334556666555554433333 368788886644 3443333 23321100 000000001 1223333222211
Q ss_pred cEEEEEcCCCCCCCCCCCHHHHHHHHHHHHh--cCCeEEEecC
Q 017967 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVA 270 (363)
Q Consensus 230 ~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~De~ 270 (363)
.-+.+++....+....++.+.+.++++.+++ ++ +||+|-.
T Consensus 81 ~~l~~lp~~~~~~~~~~~~~~~~~~l~~l~~~~yD-~viiD~p 122 (260)
T 3q9l_A 81 ENLYILPASQTRDKDALTREGVAKVLDDLKAMDFE-FIVCDSP 122 (260)
T ss_dssp TTEEEECCCSCCCTTSSCHHHHHHHHHHHHHTTCS-EEEEECC
T ss_pred CCEEEecCCCccchhhCCHHHHHHHHHHHhccCCC-EEEEcCC
Confidence 3356666655555667788899998888876 45 6777775
No 322
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=23.60 E-value=52 Score=31.23 Aligned_cols=30 Identities=3% Similarity=0.123 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++.|+++|+-||.|-++-....
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 489999999999999999999999865543
No 323
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=23.48 E-value=3.2e+02 Score=24.54 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=20.3
Q ss_pred CEEEEcCCCCcchHHH--HhhCCCCeEEEecccCCCCCCCHHHHHHHH
Q 017967 178 AKVLISSPTWGNHKNI--FNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (363)
Q Consensus 178 d~Vlv~~P~y~~~~~~--~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (363)
|.|++..|...-+..+ +...|..|. + +....++.++.++.+
T Consensus 85 D~V~i~tp~~~h~~~~~~al~~Gk~V~-~----EKP~a~~~~~~~~l~ 127 (383)
T 3oqb_A 85 TMFFDAATTQARPGLLTQAINAGKHVY-C----EKPIATNFEEALEVV 127 (383)
T ss_dssp CEEEECSCSSSSHHHHHHHHTTTCEEE-E----CSCSCSSHHHHHHHH
T ss_pred CEEEECCCchHHHHHHHHHHHCCCeEE-E----cCCCCCCHHHHHHHH
Confidence 7777777765433332 234554432 2 222355655555443
No 324
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=23.43 E-value=73 Score=29.83 Aligned_cols=29 Identities=14% Similarity=0.077 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++-|+++|+-||.|-++-...
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 58999999999999999999999986544
No 325
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=23.39 E-value=42 Score=24.53 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhcCCeEEEecC
Q 017967 249 EQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 249 ~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.--++|.++++++|+.+++|..
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHHHcCCeEEECHH
Confidence 4557788999999999999876
No 326
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.39 E-value=72 Score=30.30 Aligned_cols=30 Identities=13% Similarity=0.259 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++-|+++|+-||.|-++-....
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~ 109 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTSE 109 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccccC
Confidence 489999999999999999999999866553
No 327
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=23.39 E-value=2e+02 Score=25.38 Aligned_cols=10 Identities=0% Similarity=-0.067 Sum_probs=5.2
Q ss_pred CEEEEcCCCC
Q 017967 178 AKVLISSPTW 187 (363)
Q Consensus 178 d~Vlv~~P~y 187 (363)
|.|+|..|..
T Consensus 68 D~V~i~tp~~ 77 (334)
T 3ohs_X 68 EVAYVGTQHP 77 (334)
T ss_dssp CEEEECCCGG
T ss_pred CEEEECCCcH
Confidence 5555555544
No 328
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=23.38 E-value=2.6e+02 Score=23.28 Aligned_cols=98 Identities=17% Similarity=0.110 Sum_probs=46.7
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--- 226 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--- 226 (363)
..+++ .||++++-... ...+...|.+|++..-.-.......+..+.+...+.+| --|.+.+++.+++.
T Consensus 10 k~~lV---TGas~gIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 10 KVALV---TGASRGIGKAI-AELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN-----VTNPESIEAVLKAITDE 80 (248)
T ss_dssp CEEEE---SSCSSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEE---eCCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEe-----CCCHHHHHHHHHHHHHH
Confidence 34444 45555543321 12334578888776544333444444444455555552 23556666555421
Q ss_pred CCCcEEEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 227 PGGSFILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 227 ~~~~~~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
-.+.-+++++-...+.+. ..+.++++++.+
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 012335553333322222 347788877654
No 329
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=23.34 E-value=2.5e+02 Score=24.71 Aligned_cols=21 Identities=14% Similarity=0.142 Sum_probs=10.2
Q ss_pred CHHHHHHHHHHHHhcCCeEEE
Q 017967 247 TPEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~ 267 (363)
+.++.++|++.++++++.+.+
T Consensus 103 ~~~e~~~l~~~a~~~g~~~~v 123 (330)
T 3e9m_A 103 NAAEAEELFAIAQEQGVFLME 123 (330)
T ss_dssp SHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEE
Confidence 344455555555555544444
No 330
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=23.27 E-value=71 Score=30.79 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++-|+++|+-||.|-++-....
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 489999999999999999999999865543
No 331
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=22.91 E-value=2.6e+02 Score=24.49 Aligned_cols=68 Identities=19% Similarity=0.150 Sum_probs=33.7
Q ss_pred CcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 017967 187 WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 187 y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 266 (363)
|..+..++...++.++.+-+.+ ..-.+...++++. ++-+++ ..|.+ .+.++.++|.+.++++++.+.
T Consensus 51 ~~~~~~~l~~~~~D~V~i~tp~----~~h~~~~~~al~~---Gk~v~~----ekP~~--~~~~~~~~l~~~a~~~g~~~~ 117 (332)
T 2glx_A 51 VTSVEELVGDPDVDAVYVSTTN----ELHREQTLAAIRA---GKHVLC----EKPLA--MTLEDAREMVVAAREAGVVLG 117 (332)
T ss_dssp BSCHHHHHTCTTCCEEEECSCG----GGHHHHHHHHHHT---TCEEEE----CSSSC--SSHHHHHHHHHHHHHHTCCEE
T ss_pred cCCHHHHhcCCCCCEEEEeCCh----hHhHHHHHHHHHC---CCeEEE----eCCCc--CCHHHHHHHHHHHHHcCCEEE
Confidence 4445555544445555554311 1223444445542 222332 23443 356777777777777776665
Q ss_pred E
Q 017967 267 F 267 (363)
Q Consensus 267 ~ 267 (363)
+
T Consensus 118 ~ 118 (332)
T 2glx_A 118 T 118 (332)
T ss_dssp E
T ss_pred E
Confidence 5
No 332
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=22.83 E-value=2.2e+02 Score=25.51 Aligned_cols=20 Identities=25% Similarity=0.200 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHhcCCeEEE
Q 017967 248 PEQWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii~ 267 (363)
.++.++|++.|+++|+.+.+
T Consensus 102 ~~ea~~l~~~a~~~g~~~~v 121 (359)
T 3e18_A 102 SEDLLAIMDVAKRVNKHFMV 121 (359)
T ss_dssp HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHhCCeEEE
Confidence 44444444444444444433
No 333
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=22.79 E-value=3.2e+02 Score=22.90 Aligned_cols=93 Identities=16% Similarity=0.057 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcE
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSF 231 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 231 (363)
.|+++++-... ...+...|.+|++..-.-...... ++..|.++..+..| --|.+.+++.+.+ .-.+.-
T Consensus 18 TGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id 91 (256)
T 3gaf_A 18 TGAAAGIGRAI-AGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN-----VTDEQHREAVIKAALDQFGKIT 91 (256)
T ss_dssp CSCSSHHHHHH-HHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHHcCCCC
Confidence 45555543321 122344688887765443333332 34557777777763 2355665555442 101233
Q ss_pred EEEEcCCCC-CCCCCCCHHHHHHHHH
Q 017967 232 ILLHGCAHN-PTGIDPTPEQWEKIAD 256 (363)
Q Consensus 232 ~~~i~~p~N-PTG~~~s~~~~~~i~~ 256 (363)
+++++-... +.....+.+++++..+
T Consensus 92 ~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 92 VLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp EEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 455333222 2223567888877654
No 334
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=22.70 E-value=1.6e+02 Score=24.27 Aligned_cols=62 Identities=8% Similarity=0.011 Sum_probs=39.4
Q ss_pred HHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC----CeEEE
Q 017967 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN----HIPFF 267 (363)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~----~~ii~ 267 (363)
.++..|++++.+.. ...++.+.+.+.+.. +.++.++.- +++ +...++++++.+++.+ +.+++
T Consensus 111 ~l~~~G~~v~~LG~------~vp~~~l~~~~~~~~--~d~v~lS~~-~~~----~~~~~~~~i~~l~~~~~~~~~~v~v 176 (210)
T 1y80_A 111 MLESGGFTVYNLGV------DIEPGKFVEAVKKYQ--PDIVGMSAL-LTT----TMMNMKSTIDALIAAGLRDRVKVIV 176 (210)
T ss_dssp HHHHTTCEEEECCS------SBCHHHHHHHHHHHC--CSEEEEECC-SGG----GTHHHHHHHHHHHHTTCGGGCEEEE
T ss_pred HHHHCCCEEEECCC------CCCHHHHHHHHHHcC--CCEEEEecc-ccc----cHHHHHHHHHHHHhcCCCCCCeEEE
Confidence 45688999887754 467888888776532 223443332 222 3567888988888764 55555
No 335
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=22.69 E-value=44 Score=24.46 Aligned_cols=22 Identities=5% Similarity=0.009 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhcCCeEEEecC
Q 017967 249 EQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 249 ~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.--.+|.++++++|+.|++|..
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHHHcCCCeecCHH
Confidence 4556788899999999999865
No 336
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=22.52 E-value=2.3e+02 Score=25.20 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=6.4
Q ss_pred CEEEEcCCCCc
Q 017967 178 AKVLISSPTWG 188 (363)
Q Consensus 178 d~Vlv~~P~y~ 188 (363)
|.|+|..|...
T Consensus 67 D~V~i~tp~~~ 77 (349)
T 3i23_A 67 ELITICTPAHT 77 (349)
T ss_dssp CEEEECSCGGG
T ss_pred CEEEEeCCcHH
Confidence 56666666543
No 337
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=22.43 E-value=2.1e+02 Score=26.98 Aligned_cols=93 Identities=11% Similarity=0.133 Sum_probs=52.5
Q ss_pred CCcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEEecccCCCCCCCHHHHHHHHHcCC
Q 017967 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (363)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (363)
..+|++ ..||..+...+-. +...|..|.+.+|....-...+. ..+++++.- .+..+.++
T Consensus 12 ~~~vlV--vGgG~va~~k~~~---L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~--------~~~~~~l~------- 71 (457)
T 1pjq_A 12 DRDCLI--VGGGDVAERKARL---LLEAGARLTVNALTFIPQFTVWANEGMLTLVEG--------PFDETLLD------- 71 (457)
T ss_dssp TCEEEE--ECCSHHHHHHHHH---HHHTTBEEEEEESSCCHHHHHHHTTTSCEEEES--------SCCGGGGT-------
T ss_pred CCEEEE--ECCCHHHHHHHHH---HHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEEC--------CCCccccC-------
Confidence 456766 7888888766633 34468888888887654333332 233433321 12223331
Q ss_pred CCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeE-EEecC
Q 017967 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVA 270 (363)
Q Consensus 228 ~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i-i~De~ 270 (363)
+..+++ ..+++| +.=..+++.|+++++++ ++|+.
T Consensus 72 -~~~lVi-~at~~~-------~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 72 -SCWLAI-AATDDD-------TVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp -TCSEEE-ECCSCH-------HHHHHHHHHHHHTTCEEEETTCT
T ss_pred -CccEEE-EcCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 122333 455654 23457888899999876 46665
No 338
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=22.43 E-value=63 Score=30.68 Aligned_cols=30 Identities=13% Similarity=0.277 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++.|+++|+-||.|-++.....
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 479999999999999999999999876554
No 339
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=22.31 E-value=3.2e+02 Score=24.04 Aligned_cols=19 Identities=16% Similarity=0.100 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHhcCCeEE
Q 017967 248 PEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii 266 (363)
.++.++|++.++++|+.+.
T Consensus 103 ~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 103 LEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp HHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHHHcCCEEE
Confidence 3444444444444444443
No 340
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=22.15 E-value=4e+02 Score=23.40 Aligned_cols=110 Identities=12% Similarity=0.074 Sum_probs=56.0
Q ss_pred ccCCcEEEEeccchhHHHHHHHHHHHHhCCCCE-EEEcCCC-----------CcchHHHHhhCCCCeEEEecccCCCCCC
Q 017967 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPT-----------WGNHKNIFNDARVPWSEYRYYDPKTVGL 214 (363)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~-Vlv~~P~-----------y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 214 (363)
+++..+.+++..++..+-..+..+.. .|-. |...+|. |....++.+...+.+..+-+.. ..
T Consensus 11 ~~~~siaVV~Gasg~~G~~~~~~l~~---~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~----~~ 83 (305)
T 2fp4_A 11 VDKNTKVICQGFTGKQGTFHSQQALE---YGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPP----PF 83 (305)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHH---HTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH----HH
T ss_pred hCCCcEEEEECCCCCHHHHHHHHHHH---CCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCH----HH
Confidence 34677777434434444434332222 2322 3344454 3334444443344444443210 12
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc-CCeEEEecCCC
Q 017967 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQ 272 (363)
Q Consensus 215 d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~-~~~ii~De~y~ 272 (363)
-.+.+++++.. +...+++-.+ |. +.++.+++.+.++++ ++.+|-+.+..
T Consensus 84 ~~~~~~e~i~~---Gi~~iv~~t~----G~--~~~~~~~l~~~a~~~~gi~liGPnc~G 133 (305)
T 2fp4_A 84 AAAAINEAIDA---EVPLVVCITE----GI--PQQDMVRVKHRLLRQGKTRLIGPNCPG 133 (305)
T ss_dssp HHHHHHHHHHT---TCSEEEECCC----CC--CHHHHHHHHHHHTTCSSCEEECSSSCE
T ss_pred HHHHHHHHHHC---CCCEEEEECC----CC--ChHHHHHHHHHHHhcCCcEEEeCCCCe
Confidence 34556666653 3334332233 43 456677899999999 99988788743
No 341
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=22.12 E-value=68 Score=30.04 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGF 274 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~ 274 (363)
+.++++++++.|+++|+-||.|-++-..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~ 109 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHT 109 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 5899999999999999999999997443
No 342
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=22.10 E-value=2.5e+02 Score=25.50 Aligned_cols=11 Identities=36% Similarity=0.286 Sum_probs=6.9
Q ss_pred CEEEEcCCCCc
Q 017967 178 AKVLISSPTWG 188 (363)
Q Consensus 178 d~Vlv~~P~y~ 188 (363)
|.|++..|...
T Consensus 66 D~V~i~tp~~~ 76 (387)
T 3moi_A 66 DAVYIASPHQF 76 (387)
T ss_dssp SEEEECSCGGG
T ss_pred CEEEEcCCcHH
Confidence 66776666543
No 343
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.04 E-value=75 Score=23.08 Aligned_cols=59 Identities=10% Similarity=0.207 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCH-HHHHHHHHHHHhcCC-eEEEecCCC
Q 017967 212 VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNH-IPFFDVAYQ 272 (363)
Q Consensus 212 ~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~-~~~~~i~~~~~~~~~-~ii~De~y~ 272 (363)
...+++.+.+.+++. ....+++..|-|..|..-+. +..++.++..++.++ +.++||-|.
T Consensus 36 ~~~~~~~l~~li~e~--~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 36 LEEDVEALLDFVRRE--GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred cHHHHHHHHHHHHHc--CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 345678888888763 34567778898887765442 233444444443354 445888754
No 344
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=21.97 E-value=66 Score=29.94 Aligned_cols=31 Identities=10% Similarity=0.123 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcCC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 277 (363)
+.++++++++.|+++|+-||.|-++.....+
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTFD 103 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccCC
Confidence 5899999999999999999999998766543
No 345
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=21.75 E-value=1.5e+02 Score=26.46 Aligned_cols=72 Identities=11% Similarity=0.219 Sum_probs=41.3
Q ss_pred CCcchHHHHhh-CCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 017967 186 TWGNHKNIFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 264 (363)
Q Consensus 186 ~y~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ 264 (363)
.|..+..++.. ..+.++.+.... ..-.+...++++. ++-+++ .-|-+ .+.++.++|++.|+++|+.
T Consensus 68 ~~~~~~~ll~~~~~vD~V~i~tp~----~~H~~~~~~al~a---GkhVl~----EKP~a--~~~~e~~~l~~~a~~~g~~ 134 (330)
T 4ew6_A 68 SYTTIEAMLDAEPSIDAVSLCMPP----QYRYEAAYKALVA---GKHVFL----EKPPG--ATLSEVADLEALANKQGAS 134 (330)
T ss_dssp EESSHHHHHHHCTTCCEEEECSCH----HHHHHHHHHHHHT---TCEEEE----CSSSC--SSHHHHHHHHHHHHHHTCC
T ss_pred ccCCHHHHHhCCCCCCEEEEeCCc----HHHHHHHHHHHHc---CCcEEE----eCCCC--CCHHHHHHHHHHHHhcCCe
Confidence 35566666666 566666665411 2234555555552 333443 34443 3577788888888888877
Q ss_pred EEEecC
Q 017967 265 PFFDVA 270 (363)
Q Consensus 265 ii~De~ 270 (363)
+.+-..
T Consensus 135 ~~v~~~ 140 (330)
T 4ew6_A 135 LFASWH 140 (330)
T ss_dssp EEECCG
T ss_pred EEEEeh
Confidence 766444
No 346
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=21.47 E-value=85 Score=29.29 Aligned_cols=29 Identities=10% Similarity=0.162 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
+.++++++++-|+++|+-||.|-++....
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 48999999999999999999999987665
No 347
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=21.43 E-value=2.9e+02 Score=24.31 Aligned_cols=19 Identities=11% Similarity=0.060 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHhcCCeEE
Q 017967 248 PEQWEKIADVIQEKNHIPF 266 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii 266 (363)
.++.++|++.++++++.+.
T Consensus 104 ~~e~~~l~~~a~~~~~~~~ 122 (329)
T 3evn_A 104 YDQANELFALAESCNLFLM 122 (329)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCEEE
Confidence 4444444444444444443
No 348
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=21.35 E-value=1.5e+02 Score=22.62 Aligned_cols=58 Identities=10% Similarity=-0.026 Sum_probs=34.2
Q ss_pred HHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 017967 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (363)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~ 262 (363)
..++..|.+++.+-. ...++++.++..+.. +.++.++.-..+ ....++++++.+++.+
T Consensus 25 ~~l~~~G~~Vi~lG~------~~p~e~~v~~a~~~~--~d~v~lS~~~~~-----~~~~~~~~i~~l~~~g 82 (137)
T 1ccw_A 25 HAFTNAGFNVVNIGV------LSPQELFIKAAIETK--ADAILVSSLYGQ-----GEIDCKGLRQKCDEAG 82 (137)
T ss_dssp HHHHHTTCEEEEEEE------EECHHHHHHHHHHHT--CSEEEEEECSST-----HHHHHTTHHHHHHHTT
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHhcC--CCEEEEEecCcC-----cHHHHHHHHHHHHhcC
Confidence 356778888887754 256777777766532 224443432221 2456777777777653
No 349
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=21.21 E-value=2.8e+02 Score=23.48 Aligned_cols=98 Identities=14% Similarity=0.077 Sum_probs=46.6
Q ss_pred CcEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCC-CCcch---HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHc
Q 017967 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSP-TWGNH---KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (363)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P-~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (363)
..+++ .||++++-... ...+...|..|++..- .-... ...++..|.++..+..| --|.+.+++.+.+
T Consensus 29 k~vlV---TGas~gIG~ai-a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~d~~~v~~~~~~ 99 (269)
T 4dmm_A 29 RIALV---TGASRGIGRAI-ALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKAD-----VSQESEVEALFAA 99 (269)
T ss_dssp CEEEE---TTCSSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTSHHHHHHHHHH
T ss_pred CEEEE---ECCCCHHHHHH-HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHH
Confidence 34544 45555543321 1233457888776433 21222 22334567777777763 2355666555442
Q ss_pred ---CCCCcEEEEEcCCCCCCC--CCCCHHHHHHHHH
Q 017967 226 ---APGGSFILLHGCAHNPTG--IDPTPEQWEKIAD 256 (363)
Q Consensus 226 ---~~~~~~~~~i~~p~NPTG--~~~s~~~~~~i~~ 256 (363)
.-.+.-+++.+-...+.+ ...+.++++++++
T Consensus 100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 101233455333322222 1357788877654
No 350
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=21.08 E-value=3.3e+02 Score=23.53 Aligned_cols=79 Identities=13% Similarity=0.007 Sum_probs=46.7
Q ss_pred CcchHHHHhhCCCCeEEEecccCC-CCCCCHHHHHHHHHcCCCCcEEEEEcCCC---CCCCCC-------------CCHH
Q 017967 187 WGNHKNIFNDARVPWSEYRYYDPK-TVGLDFEGMIADIKAAPGGSFILLHGCAH---NPTGID-------------PTPE 249 (363)
Q Consensus 187 y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~i~~p~---NPTG~~-------------~s~~ 249 (363)
+......++..|++-+++..++.. -+..+++.+.+.+++. +-.+..++.+. |.+.-. -..+
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~--GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 108 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDA--GLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIME 108 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHT--TCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHc--CCeEEEEecccccccccCcccccccccchhhHHHHHH
Confidence 334455567889988887643211 2345789999888863 33343333332 221110 1246
Q ss_pred HHHHHHHHHHhcCCeEEE
Q 017967 250 QWEKIADVIQEKNHIPFF 267 (363)
Q Consensus 250 ~~~~i~~~~~~~~~~ii~ 267 (363)
.+++.+++|++-|+-.|+
T Consensus 109 ~~~~~i~~A~~lG~~~v~ 126 (303)
T 3l23_A 109 YWKATAADHAKLGCKYLI 126 (303)
T ss_dssp HHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHcCCCEEE
Confidence 678889999998876665
No 351
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=20.80 E-value=1e+02 Score=27.79 Aligned_cols=53 Identities=9% Similarity=-0.133 Sum_probs=34.0
Q ss_pred cEEEEeccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEEec
Q 017967 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (363)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (363)
.|+. +.+|+.+..++.. -+.+.-.-+|++|.-.-..-...++.+|.+++.++-
T Consensus 89 ~Vv~--aSsGN~g~alA~~-aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~ 141 (344)
T 3vc3_A 89 TLIE--PTSGNMGISMAFM-AAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDP 141 (344)
T ss_dssp EEEE--ECSSHHHHHHHHH-HHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred EEEE--eCCcHHHHHHHHH-HHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 4544 7788888777642 223332246666665545556677899999998864
No 352
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=20.75 E-value=2.9e+02 Score=24.66 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=23.3
Q ss_pred CEEEEcCCCCcchHHHH--hhCCCCeEEEecccCCCCCCCHHHHHHHHH
Q 017967 178 AKVLISSPTWGNHKNIF--NDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (363)
Q Consensus 178 d~Vlv~~P~y~~~~~~~--~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (363)
|.|+|..|...=+..+. ...|..| .+ +.-...++++.++.+.
T Consensus 96 DaV~IatP~~~H~~~a~~al~aGkhV-l~----EKPla~~~~ea~~l~~ 139 (393)
T 4fb5_A 96 DVVSVTTPNQFHAEMAIAALEAGKHV-WC----EKPMAPAYADAERMLA 139 (393)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEE-EE----CSCSCSSHHHHHHHHH
T ss_pred cEEEECCChHHHHHHHHHHHhcCCeE-EE----ccCCcccHHHHHHhhh
Confidence 88888888765443333 3556543 11 2234567666655543
No 353
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=20.69 E-value=2.5e+02 Score=23.74 Aligned_cols=93 Identities=13% Similarity=0.046 Sum_probs=44.9
Q ss_pred cchhHHHHHHHHHHHHhCCCCEEEEcCC-CCcch---HHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcC---CCCc
Q 017967 158 LSGTGSLRLAAALIERYFPGAKVLISSP-TWGNH---KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGS 230 (363)
Q Consensus 158 ~ggt~al~l~~~l~~~~~~gd~Vlv~~P-~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~ 230 (363)
.|+++++-... ...+...|..|++..- .-... ...++..|.++..+.+| --|.+.+++.+.+. -.+.
T Consensus 24 TGas~gIG~ai-a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~i 97 (270)
T 3is3_A 24 TGSGRGIGAAV-AVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKAD-----IRQVPEIVKLFDQAVAHFGHL 97 (270)
T ss_dssp SCTTSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCchHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHHcCCC
Confidence 55555543331 1233457888776432 22212 22344567788777763 23556666555431 0122
Q ss_pred EEEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 231 FILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 231 ~~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
-+++.+-...+.+. .++.++++++++
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 34442222223332 347788877654
No 354
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.53 E-value=71 Score=27.87 Aligned_cols=24 Identities=4% Similarity=0.259 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
..+.++++++.|+++|+.+|+|--
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 478999999999999999999854
No 355
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=20.51 E-value=72 Score=24.44 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=27.2
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCCCCCCCCCC-HHHHH---HHHHHHHh-----cCCeEEEecCCCCCc
Q 017967 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPT-PEQWE---KIADVIQE-----KNHIPFFDVAYQGFA 275 (363)
Q Consensus 217 ~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s-~~~~~---~i~~~~~~-----~~~~ii~De~y~~~~ 275 (363)
+-+..++... -..++++++ .|+|...| .++++ +|.+.++- .|.+||-|+-|..|.
T Consensus 58 ei~~~Al~~~-A~~vIl~HN---HPSG~~~PS~~D~~~T~~l~~a~~ll~I~llDHiIig~~~~~Sf~ 121 (126)
T 2qlc_A 58 EIFKAAIRES-AHSIILVHN---HPSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFR 121 (126)
T ss_dssp HHHHHHHHTT-CSEEEEEEE---CSSSCCSCCHHHHHHHHHHHHHHHHHTCEEEEEEEECSSCEEETT
T ss_pred HHHHHHHHcC-CcEEEEEec---CCCCCCCCCHHHHHHHHHHHHHHHHCCCeEeeeEEEeCCcEEEec
Confidence 4455666642 234444443 45555443 44432 34444443 356677777665554
No 356
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=20.51 E-value=86 Score=30.68 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 247 s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
+.++++++++-|+++|+-||.|-+|..+..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 250 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCGY 250 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCcc
Confidence 479999999999999999999999876653
No 357
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=20.46 E-value=3.2e+02 Score=23.49 Aligned_cols=75 Identities=9% Similarity=-0.039 Sum_probs=43.0
Q ss_pred CCCCEEEEcCCC--CcchHHHHhhCCCCeEEEecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHH
Q 017967 175 FPGAKVLISSPT--WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 252 (363)
Q Consensus 175 ~~gd~Vlv~~P~--y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~ 252 (363)
.+|.+|+++... -......++..|+++..+++|.......+.+.+.+.+....... ++++.+ ..-++
T Consensus 155 ~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~~~~~d-~v~ftS----------~~~v~ 223 (286)
T 1jr2_A 155 SSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPA-SITFFS----------PSGLT 223 (286)
T ss_dssp CCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEECTTHHHHHHHHHHHHCSCS-EEEESS----------HHHHH
T ss_pred cCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEeeCCCcHHHHHHHHHhCCCCC-EEEEEC----------hHHHH
Confidence 367889888654 34567788899999999998743111112235555554311122 333333 44566
Q ss_pred HHHHHHHh
Q 017967 253 KIADVIQE 260 (363)
Q Consensus 253 ~i~~~~~~ 260 (363)
.+.+.+.+
T Consensus 224 ~f~~~~~~ 231 (286)
T 1jr2_A 224 YSLKHIQE 231 (286)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 66665543
No 358
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=20.46 E-value=2.9e+02 Score=25.44 Aligned_cols=12 Identities=25% Similarity=0.321 Sum_probs=7.7
Q ss_pred CEEEEcCCCCcc
Q 017967 178 AKVLISSPTWGN 189 (363)
Q Consensus 178 d~Vlv~~P~y~~ 189 (363)
|.|+|..|...-
T Consensus 112 D~V~I~tp~~~H 123 (417)
T 3v5n_A 112 EAVAIVTPNHVH 123 (417)
T ss_dssp SEEEECSCTTSH
T ss_pred cEEEECCCcHHH
Confidence 677777776543
No 359
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=20.35 E-value=1.3e+02 Score=26.73 Aligned_cols=61 Identities=7% Similarity=-0.036 Sum_probs=0.0
Q ss_pred ecccCCCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhc---CCeEEE
Q 017967 205 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK---NHIPFF 267 (363)
Q Consensus 205 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~---~~~ii~ 267 (363)
|+ .+++.+|.+.+++.++..-+.-+=-++.+.++==+..++.+|++++++.+.+. ++.+|.
T Consensus 27 Pf--~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 27 PF--TESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CB--CTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cC--CCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
No 360
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=20.34 E-value=1.1e+02 Score=29.78 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=27.0
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEecCCCCCcC
Q 017967 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (363)
Q Consensus 245 ~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 276 (363)
.=+.++++++++-|+++|+-||.|-+|..+..
T Consensus 215 ~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 246 (583)
T 1ea9_C 215 FGDKDTLKKLVDLCHERGIRVLLDAVFNHSGR 246 (583)
T ss_dssp TCCHHHHHHHHHHHTTTTCEEEEECCCSBCCT
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccccCCC
Confidence 33589999999999999999999999876653
No 361
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=20.29 E-value=71 Score=30.34 Aligned_cols=28 Identities=14% Similarity=0.284 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcCCeEEEecCCCCCc
Q 017967 248 PEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (363)
Q Consensus 248 ~~~~~~i~~~~~~~~~~ii~De~y~~~~ 275 (363)
.++++++++-|+++|+-||.|-++-...
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 6899999999999999999999886654
No 362
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=20.23 E-value=1.1e+02 Score=28.94 Aligned_cols=52 Identities=15% Similarity=0.033 Sum_probs=35.0
Q ss_pred CCCCCCHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEecC
Q 017967 210 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (363)
Q Consensus 210 ~~~~~d~~~l~~~l~~~~~~~~~~~i~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De~ 270 (363)
.+|.+|.-++.++.. ..- ..++++.. .++.++++++++.|++.|+.+++|-.
T Consensus 114 KDFI~d~~Qi~ea~~-~GA-D~ILLi~a-------~l~~~~l~~l~~~a~~lgm~~LvEvh 165 (452)
T 1pii_A 114 KDFIIDPYQIYLARY-YQA-DACLLMLS-------VLDDDQYRQLAAVAHSLEMGVLTEVS 165 (452)
T ss_dssp ESCCCSHHHHHHHHH-TTC-SEEEEETT-------TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EeccCCHHHHHHHHH-cCC-CEEEEEcc-------cCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 357788777777443 233 33444333 36678999999999999988888643
No 363
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=20.20 E-value=41 Score=25.58 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=24.3
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEecCCCC
Q 017967 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (363)
Q Consensus 243 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 273 (363)
|. ++.+.+..|.+..++++++++.|.-+.+
T Consensus 34 Gs-i~~~~l~~I~~~~~~r~VIi~TD~D~~G 63 (119)
T 2fcj_A 34 GT-ISDARLEELADELEGYDVYLLADADEAG 63 (119)
T ss_dssp SC-CCHHHHHHHHHHTTTSEEEEECCSSHHH
T ss_pred Cc-cCHHHHHHHHHHhcCCCEEEEECCCccH
Confidence 44 7899999999999889999998866443
No 364
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=20.14 E-value=5.7e+02 Score=24.35 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=53.1
Q ss_pred ccCCcEEEEeccchhHHHHHHHHHHHHhCCCCE-EEEc-CCC----------------CcchHHHHhhCCCCeEEEeccc
Q 017967 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLIS-SPT----------------WGNHKNIFNDARVPWSEYRYYD 208 (363)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~l~~~~~~gd~-Vlv~-~P~----------------y~~~~~~~~~~G~~~~~v~~~~ 208 (363)
+.++.+++ ..||++++-.... ..+...|.. |++. .-. -......++..|.++..+.+|
T Consensus 248 ~~~~~~vL--ITGgsgGIG~~lA-~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~D- 323 (525)
T 3qp9_A 248 WQADGTVL--VTGAEEPAAAEAA-RRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCD- 323 (525)
T ss_dssp SCTTSEEE--ESSTTSHHHHHHH-HHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECC-
T ss_pred ecCCCEEE--EECCCCcHHHHHH-HHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECC-
Confidence 44556655 6777777554421 122335644 4443 221 122333345668888888773
Q ss_pred CCCCCCCHHHHHHHHHcCC--CCcEEEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 209 PKTVGLDFEGMIADIKAAP--GGSFILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 209 ~~~~~~d~~~l~~~l~~~~--~~~~~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
--|.+.+++.+.... .+.-+++++-.-...+. .++.++++++++
T Consensus 324 ----vtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 324 ----LTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp ----TTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 247788888887532 12334543333222222 456777776654
No 365
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=20.11 E-value=2.8e+02 Score=23.65 Aligned_cols=57 Identities=14% Similarity=0.215 Sum_probs=28.7
Q ss_pred hhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCcEEEEEcCCCCCCCC---CCCHHHHHHHHH
Q 017967 195 NDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGI---DPTPEQWEKIAD 256 (363)
Q Consensus 195 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~i~~p~NPTG~---~~s~~~~~~i~~ 256 (363)
+..|.++..+.+| --|.+.+++.+.+ .-.+.-+++++-...+.+. ..+.++++++++
T Consensus 72 ~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 72 KGHNRRIVTAEVD-----VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp HTTTCCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hhcCCceEEEEcC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 3456777777763 2355666555542 1012334553333223232 357788877654
No 366
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=20.07 E-value=1.4e+02 Score=27.09 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=34.2
Q ss_pred CcchHHHHHHHHHHHhcCCCCcccCCcEEEEeccchhHHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCe
Q 017967 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPW 201 (363)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 201 (363)
..|.+.|-+.+ +..| +.+.+++.+....|+|=..++..+.... ..|..|++.+.....-...++..|+..
T Consensus 45 ~TG~~~LD~~L-----g~GG--l~~G~ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~~~~~a~~~g~~~ 115 (356)
T 1u94_A 45 STGSLSLDIAL-----GAGG--LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDI 115 (356)
T ss_dssp CCSCHHHHHHT-----SSSS--EETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCG
T ss_pred cCCCHHHHHHh-----ccCC--ccCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCccHHHHHHcCCCh
Confidence 45666665432 1112 3356676655666666555554443322 356555555443222222356667654
No 367
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=20.02 E-value=3.8e+02 Score=22.69 Aligned_cols=94 Identities=19% Similarity=0.162 Sum_probs=45.7
Q ss_pred ccchhHHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---HhhCCCCeEEEecccCCCCCCCHHHHHHHHHc---CCCCc
Q 017967 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGS 230 (363)
Q Consensus 157 t~ggt~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~ 230 (363)
..||++++-... ...+...|..|++..-.-...... ++..|.++..+.+| --|.+.+++.+.. .-.+.
T Consensus 9 VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 9 ITGASGGIGEGI-ARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD-----VTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp ESSTTSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHHHSCC
T ss_pred EeCCccHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHHcCCC
Confidence 355555543331 123345788887765443333332 33457777777653 2355666555442 10123
Q ss_pred EEEEEcCCCCCCCC--CCCHHHHHHHHH
Q 017967 231 FILLHGCAHNPTGI--DPTPEQWEKIAD 256 (363)
Q Consensus 231 ~~~~i~~p~NPTG~--~~s~~~~~~i~~ 256 (363)
-+++.+-.-.+.+. ..+.++++++++
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 35553333333332 347788876654
No 368
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.00 E-value=4.4e+02 Score=22.95 Aligned_cols=14 Identities=21% Similarity=0.650 Sum_probs=11.0
Q ss_pred CC-CEEEEcCCCCcc
Q 017967 176 PG-AKVLISSPTWGN 189 (363)
Q Consensus 176 ~g-d~Vlv~~P~y~~ 189 (363)
-| |.|++..|.|..
T Consensus 97 ~Gadavlv~~P~y~~ 111 (294)
T 3b4u_A 97 AGARNILLAPPSYFK 111 (294)
T ss_dssp TTCSEEEECCCCSSC
T ss_pred cCCCEEEEcCCcCCC
Confidence 34 899999998854
Done!