Query 017968
Match_columns 363
No_of_seqs 126 out of 1933
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 05:00:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017968.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017968hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15493 5-methylthioadenosine 100.0 2.3E-48 5.1E-53 367.3 38.2 344 2-362 84-432 (435)
2 TIGR03314 Se_ssnA putative sel 100.0 2.7E-48 5.9E-53 367.5 34.8 340 2-361 87-435 (441)
3 PRK07203 putative chlorohydrol 100.0 1.6E-47 3.4E-52 363.5 36.3 340 2-361 88-436 (442)
4 PRK06687 chlorohydrolase; Vali 100.0 1.6E-46 3.5E-51 354.6 36.0 332 2-349 83-419 (419)
5 PRK07228 N-ethylammeline chlor 100.0 5.4E-45 1.2E-49 347.0 38.4 351 2-361 81-435 (445)
6 PRK12393 amidohydrolase; Provi 100.0 6.9E-45 1.5E-49 345.8 38.9 350 2-361 86-450 (457)
7 PRK06038 N-ethylammeline chlor 100.0 7.4E-45 1.6E-49 343.5 38.9 342 2-361 80-422 (430)
8 PRK08393 N-ethylammeline chlor 100.0 6.5E-45 1.4E-49 343.5 38.4 343 2-362 79-422 (424)
9 PRK09045 N-ethylammeline chlor 100.0 2.6E-44 5.7E-49 341.5 38.1 343 2-360 91-435 (443)
10 PRK06380 metal-dependent hydro 100.0 6.3E-44 1.4E-48 337.0 36.6 332 2-354 79-414 (418)
11 PRK08203 hydroxydechloroatrazi 100.0 9.6E-44 2.1E-48 338.6 37.6 348 2-361 86-445 (451)
12 TIGR02022 hutF formiminoglutam 100.0 7.6E-44 1.6E-48 338.2 36.3 347 2-361 81-451 (455)
13 PRK09229 N-formimino-L-glutama 100.0 1.8E-43 3.9E-48 336.5 35.3 347 2-361 81-451 (456)
14 PRK06151 N-ethylammeline chlor 100.0 1.2E-42 2.6E-47 333.1 37.3 347 2-361 80-459 (488)
15 PRK08204 hypothetical protein; 100.0 1.6E-42 3.4E-47 330.6 35.7 347 2-362 82-439 (449)
16 PRK09228 guanine deaminase; Pr 100.0 8.5E-43 1.8E-47 329.0 32.5 325 2-341 94-432 (433)
17 cd01303 GDEase Guanine deamina 100.0 1.9E-41 4.1E-46 320.0 33.4 326 2-335 90-429 (429)
18 cd01312 Met_dep_hydrolase_D Me 100.0 4.3E-41 9.2E-46 311.9 31.5 309 2-336 56-381 (381)
19 cd01313 Met_dep_hydrolase_E Me 100.0 9.6E-41 2.1E-45 314.2 31.1 324 2-336 72-418 (418)
20 TIGR02967 guan_deamin guanine 100.0 6.1E-40 1.3E-44 308.4 34.2 319 2-335 69-401 (401)
21 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 2.4E-39 5.3E-44 306.1 36.3 330 2-345 81-411 (411)
22 PRK08418 chlorohydrolase; Prov 100.0 2.6E-39 5.6E-44 302.8 31.5 310 2-338 83-407 (408)
23 COG0402 SsnA Cytosine deaminas 100.0 2.5E-39 5.5E-44 305.0 31.6 328 2-345 82-414 (421)
24 KOG3968 Atrazine chlorohydrola 100.0 3.2E-40 7E-45 291.0 21.4 331 1-340 98-438 (439)
25 PRK07213 chlorohydrolase; Prov 100.0 9.2E-36 2E-40 276.7 29.5 284 12-337 88-375 (375)
26 cd01314 D-HYD D-hydantoinases 100.0 1.2E-31 2.6E-36 255.7 22.2 309 14-346 67-442 (447)
27 PLN02942 dihydropyrimidinase 100.0 3.9E-30 8.4E-35 246.3 26.0 310 14-347 73-449 (486)
28 PRK09230 cytosine deaminase; P 100.0 3.2E-30 7E-35 242.6 23.3 289 2-341 83-407 (426)
29 TIGR02033 D-hydantoinase D-hyd 100.0 9.5E-30 2.1E-34 243.4 23.8 307 13-346 66-444 (454)
30 TIGR01224 hutI imidazoloneprop 100.0 3.1E-29 6.8E-34 234.1 24.2 281 10-337 83-377 (377)
31 PRK09356 imidazolonepropionase 100.0 5.3E-29 1.2E-33 234.8 23.7 286 11-340 109-406 (406)
32 PRK08323 phenylhydantoinase; V 100.0 1.1E-28 2.3E-33 236.3 22.5 309 10-346 61-442 (459)
33 cd01296 Imidazolone-5PH Imidaz 100.0 5.7E-28 1.2E-32 225.2 24.7 281 10-335 80-371 (371)
34 cd01293 Bact_CD Bacterial cyto 100.0 4.3E-27 9.4E-32 221.5 25.1 286 11-338 85-398 (398)
35 PRK07572 cytosine deaminase; V 100.0 1.5E-26 3.2E-31 218.7 26.9 288 13-343 89-405 (426)
36 PRK12394 putative metallo-depe 99.9 6.1E-26 1.3E-30 211.4 22.7 275 31-341 80-376 (379)
37 PLN02795 allantoinase 99.9 2.2E-25 4.7E-30 213.6 22.5 306 16-345 115-494 (505)
38 PRK05985 cytosine deaminase; P 99.9 9.4E-25 2E-29 204.6 24.1 284 14-342 90-391 (391)
39 PRK14085 imidazolonepropionase 99.9 1.7E-24 3.8E-29 202.0 24.4 260 10-306 101-364 (382)
40 cd01305 archeal_chlorohydrolas 99.9 8.6E-25 1.9E-29 193.9 19.9 227 3-281 33-263 (263)
41 PRK13404 dihydropyrimidinase; 99.9 2E-25 4.3E-30 213.0 16.9 304 16-346 73-451 (477)
42 PRK09357 pyrC dihydroorotase; 99.9 3.6E-24 7.7E-29 202.8 24.2 293 14-341 67-423 (423)
43 cd01299 Met_dep_hydrolase_A Me 99.9 2.5E-24 5.4E-29 198.6 22.3 251 17-306 37-335 (342)
44 TIGR03178 allantoinase allanto 99.9 1.6E-25 3.4E-30 212.8 13.1 231 103-346 141-435 (443)
45 PRK07583 cytosine deaminase-li 99.9 2E-22 4.4E-27 191.1 30.2 281 15-341 115-424 (438)
46 PRK07575 dihydroorotase; Provi 99.9 2E-23 4.3E-28 197.7 22.8 195 120-346 212-427 (438)
47 COG1574 Predicted metal-depend 99.9 7.5E-23 1.6E-27 193.5 26.4 207 114-341 315-534 (535)
48 PRK08417 dihydroorotase; Provi 99.9 5.3E-24 1.1E-28 198.4 18.2 217 116-340 126-386 (386)
49 PRK06189 allantoinase; Provisi 99.9 1.1E-23 2.3E-28 200.5 20.6 300 16-346 70-438 (451)
50 COG0044 PyrC Dihydroorotase an 99.9 1.3E-23 2.7E-28 195.3 19.8 296 11-346 64-427 (430)
51 PRK06846 putative deaminase; V 99.9 3.8E-23 8.3E-28 194.6 22.3 278 18-341 110-406 (410)
52 PRK08044 allantoinase; Provisi 99.9 1.1E-23 2.5E-28 199.6 17.4 214 117-345 164-439 (449)
53 TIGR01975 isoAsp_dipep isoaspa 99.9 2.7E-22 5.9E-27 185.4 25.1 261 27-345 82-383 (389)
54 PRK09236 dihydroorotase; Revie 99.9 8.3E-23 1.8E-27 194.0 21.9 154 177-346 262-433 (444)
55 cd01297 D-aminoacylase D-amino 99.9 4.9E-22 1.1E-26 187.3 26.1 234 84-347 163-411 (415)
56 cd01315 L-HYD_ALN L-Hydantoina 99.9 4.7E-22 1E-26 189.8 25.1 300 17-346 69-439 (447)
57 PRK10657 isoaspartyl dipeptida 99.9 4.3E-22 9.3E-27 186.7 24.2 262 26-346 81-383 (388)
58 PRK07627 dihydroorotase; Provi 99.9 2.8E-22 6.2E-27 188.5 21.1 289 16-341 71-424 (425)
59 COG1228 HutI Imidazolonepropio 99.9 6.6E-22 1.4E-26 183.0 22.4 188 113-343 213-405 (406)
60 cd01300 YtcJ_like YtcJ_like me 99.9 1.9E-21 4.1E-26 187.2 25.2 264 14-301 175-479 (479)
61 PRK01211 dihydroorotase; Provi 99.9 7.8E-23 1.7E-27 190.4 14.7 287 13-346 59-396 (409)
62 TIGR00857 pyrC_multi dihydroor 99.9 8.3E-21 1.8E-25 178.6 24.7 212 116-341 143-411 (411)
63 PRK00369 pyrC dihydroorotase; 99.9 7.9E-22 1.7E-26 182.7 17.1 154 177-346 193-379 (392)
64 PRK09060 dihydroorotase; Valid 99.9 1.1E-20 2.4E-25 179.1 23.7 296 15-348 71-431 (444)
65 PRK09059 dihydroorotase; Valid 99.9 6.8E-21 1.5E-25 179.4 20.4 210 117-340 163-428 (429)
66 PRK02382 dihydroorotase; Provi 99.9 3.6E-20 7.7E-25 176.0 25.5 295 16-346 70-425 (443)
67 PRK15446 phosphonate metabolis 99.9 1.3E-20 2.8E-25 175.1 21.8 169 117-341 211-382 (383)
68 cd01306 PhnM PhnM is believed 99.9 1.5E-20 3.2E-25 168.8 21.3 163 117-335 160-325 (325)
69 PF01979 Amidohydro_1: Amidohy 99.9 7.1E-22 1.5E-26 181.6 12.5 258 15-303 22-333 (333)
70 PRK09237 dihydroorotase; Provi 99.9 8E-20 1.7E-24 170.6 26.0 280 30-343 76-372 (380)
71 KOG2584 Dihydroorotase and rel 99.9 9.6E-22 2.1E-26 173.9 11.8 321 7-345 75-459 (522)
72 cd01302 Cyclic_amidohydrolases 99.9 2.3E-20 4.9E-25 170.9 21.1 248 16-311 22-312 (337)
73 PRK06886 hypothetical protein; 99.9 8.2E-20 1.8E-24 164.5 24.1 240 11-285 58-328 (329)
74 cd01318 DHOase_IIb Dihydroorot 99.9 3.1E-20 6.7E-25 171.2 20.9 282 15-335 21-361 (361)
75 PRK04250 dihydroorotase; Provi 99.9 4.8E-20 1E-24 171.8 20.2 153 177-346 200-391 (398)
76 PRK07369 dihydroorotase; Provi 99.9 1.8E-20 3.8E-25 175.9 17.1 282 15-333 72-418 (418)
77 PRK09358 adenosine deaminase; 99.8 1.8E-19 4E-24 165.6 22.5 240 2-285 61-323 (340)
78 TIGR01430 aden_deam adenosine 99.8 2.1E-19 4.5E-24 164.1 21.1 238 2-285 52-313 (324)
79 TIGR02318 phosphono_phnM phosp 99.8 8.7E-19 1.9E-23 162.3 24.5 167 118-339 207-376 (376)
80 cd01320 ADA Adenosine deaminas 99.8 6.4E-19 1.4E-23 161.2 22.7 238 2-285 53-314 (325)
81 cd01308 Isoaspartyl-dipeptidas 99.8 1.1E-17 2.4E-22 156.8 27.4 264 27-348 80-384 (387)
82 cd01317 DHOase_IIa Dihydroorot 99.8 5E-19 1.1E-23 164.7 17.8 165 120-310 172-348 (374)
83 cd01292 metallo-dependent_hydr 99.8 4.8E-18 1E-22 151.2 22.5 235 12-281 25-275 (275)
84 PRK09061 D-glutamate deacylase 99.8 1.5E-17 3.4E-22 159.7 26.4 217 115-352 194-503 (509)
85 COG3454 Metal-dependent hydrol 99.8 7.5E-19 1.6E-23 150.7 12.2 164 120-339 210-377 (377)
86 PRK13309 ureC urease subunit a 99.8 5.2E-17 1.1E-21 154.3 24.3 119 208-343 345-465 (572)
87 cd01309 Met_dep_hydrolase_C Me 99.8 7.5E-18 1.6E-22 155.7 17.1 172 121-339 181-359 (359)
88 PRK13985 ureB urease subunit b 99.8 6.3E-17 1.4E-21 151.7 22.6 202 109-341 217-458 (568)
89 PF07969 Amidohydro_3: Amidohy 99.8 8.6E-17 1.9E-21 151.8 20.9 256 16-301 124-404 (404)
90 TIGR01792 urease_alph urease, 99.8 1.1E-16 2.4E-21 151.9 21.4 206 107-341 214-457 (567)
91 PLN02303 urease 99.8 5E-17 1.1E-21 157.9 19.0 213 109-341 486-727 (837)
92 PRK13206 ureC urease subunit a 99.8 2E-16 4.4E-21 149.5 22.5 195 113-341 227-463 (573)
93 COG3964 Predicted amidohydrola 99.7 4.4E-17 9.5E-22 138.5 15.3 241 32-306 82-340 (386)
94 PRK13207 ureC urease subunit a 99.7 1E-15 2.2E-20 145.2 25.4 191 116-341 224-458 (568)
95 cd01316 CAD_DHOase The eukaryo 99.7 9.6E-16 2.1E-20 139.9 23.0 274 14-345 20-338 (344)
96 cd00375 Urease_alpha Urease al 99.7 5.1E-16 1.1E-20 146.1 21.4 202 110-341 218-458 (567)
97 cd01307 Met_dep_hydrolase_B Me 99.7 9.6E-16 2.1E-20 140.9 21.7 243 23-306 54-317 (338)
98 TIGR01178 ade adenine deaminas 99.7 8.8E-16 1.9E-20 148.0 20.0 251 31-341 73-333 (552)
99 COG1820 NagA N-acetylglucosami 99.7 4.4E-16 9.5E-21 139.2 15.0 274 16-340 72-380 (380)
100 cd01295 AdeC Adenine deaminase 99.7 5.9E-15 1.3E-19 139.4 22.7 172 118-341 119-292 (422)
101 PRK13308 ureC urease subunit a 99.7 4.2E-15 9.2E-20 140.1 20.9 193 115-341 223-459 (569)
102 TIGR03121 one_C_dehyd_A formyl 99.6 4.7E-14 1E-18 133.4 21.9 80 262-347 427-506 (556)
103 cd00854 NagA N-acetylglucosami 99.6 2.4E-14 5.2E-19 133.2 16.6 191 102-335 159-374 (374)
104 COG1001 AdeC Adenine deaminase 99.6 2E-13 4.3E-18 127.6 18.7 259 13-345 89-364 (584)
105 cd01304 FMDH_A Formylmethanofu 99.6 3.6E-13 7.7E-18 126.9 20.2 79 262-345 424-502 (541)
106 TIGR00221 nagA N-acetylglucosa 99.6 4.4E-13 9.6E-18 123.9 20.5 274 15-336 74-380 (380)
107 cd01294 DHOase Dihydroorotase 99.6 3.4E-13 7.3E-18 123.8 19.6 163 118-295 111-308 (335)
108 PRK11170 nagA N-acetylglucosam 99.6 8E-13 1.7E-17 122.5 21.6 128 175-340 245-381 (382)
109 PRK10027 cryptic adenine deami 99.5 6.3E-13 1.4E-17 128.5 20.3 257 15-344 98-369 (588)
110 TIGR03583 EF_0837 probable ami 99.5 1E-11 2.2E-16 115.6 25.1 265 31-337 74-363 (365)
111 cd00443 ADA_AMPD Adenosine/AMP 99.5 9.1E-12 2E-16 112.4 21.5 238 3-284 27-293 (305)
112 COG0804 UreC Urea amidohydrola 99.4 4.1E-12 9E-17 112.4 15.3 256 28-340 144-457 (568)
113 PF13147 Amidohydro_4: Amidohy 99.4 8.1E-12 1.8E-16 112.5 15.4 79 208-300 224-304 (304)
114 PTZ00124 adenosine deaminase; 99.4 4.6E-11 9.9E-16 109.3 19.7 239 2-285 86-350 (362)
115 TIGR00856 pyrC_dimer dihydroor 99.4 4.9E-11 1.1E-15 109.0 19.1 162 118-303 113-311 (341)
116 cd01321 ADGF Adenosine deamina 99.3 3.4E-10 7.4E-15 103.5 21.9 247 3-285 51-330 (345)
117 cd00530 PTE Phosphotriesterase 99.3 5.9E-10 1.3E-14 100.6 22.1 241 20-282 30-293 (293)
118 PRK05451 dihydroorotase; Provi 99.3 9.6E-11 2.1E-15 107.6 16.4 162 118-294 116-313 (345)
119 PLN02599 dihydroorotase 99.2 4.7E-10 1E-14 102.9 17.3 156 119-290 135-328 (364)
120 COG1816 Add Adenosine deaminas 99.2 2E-09 4.3E-14 96.7 18.6 238 2-285 65-326 (345)
121 PRK09875 putative hydrolase; P 99.2 2E-08 4.4E-13 89.2 23.0 240 21-283 33-292 (292)
122 PF00962 A_deaminase: Adenosin 99.1 3.3E-09 7.2E-14 97.4 16.8 225 16-285 72-321 (331)
123 TIGR01431 adm_rel adenosine de 99.0 2E-07 4.3E-12 88.6 22.8 238 13-285 188-456 (479)
124 KOG3892 N-acetyl-glucosamine-6 98.9 8.5E-08 1.8E-12 81.1 13.6 58 264-341 348-405 (407)
125 PF02126 PTE: Phosphotriestera 98.8 2.9E-07 6.4E-12 82.5 17.4 238 21-282 37-307 (308)
126 KOG1097 Adenine deaminase/aden 98.8 1.8E-06 3.9E-11 78.1 22.0 234 13-285 112-372 (399)
127 TIGR00010 hydrolase, TatD fami 98.7 1.4E-06 3.1E-11 76.6 16.8 217 27-284 20-252 (252)
128 COG1229 FwdA Formylmethanofura 98.6 3.2E-07 6.9E-12 82.1 9.6 81 262-345 435-515 (575)
129 cd01310 TatD_DNAse TatD like p 98.6 1.8E-05 3.9E-10 69.5 20.9 217 26-283 19-251 (251)
130 COG3653 N-acyl-D-aspartate/D-g 98.5 1.1E-07 2.4E-12 85.6 5.7 94 263-357 472-570 (579)
131 COG1735 Php Predicted metal-de 98.5 5.6E-05 1.2E-09 65.9 20.0 241 21-284 47-314 (316)
132 PRK10812 putative DNAse; Provi 98.0 0.0014 3.1E-08 57.9 18.5 139 120-285 111-257 (265)
133 COG0084 TatD Mg-dependent DNas 97.9 0.007 1.5E-07 52.9 21.2 217 27-284 22-256 (256)
134 PRK11449 putative deoxyribonuc 97.9 0.0081 1.8E-07 52.9 21.5 137 120-284 114-258 (258)
135 PF01026 TatD_DNase: TatD rela 97.8 0.0019 4.2E-08 56.9 16.6 221 25-283 17-255 (255)
136 PRK10425 DNase TatD; Provision 97.5 0.028 6.1E-07 49.5 19.7 139 120-284 108-258 (258)
137 PRK06361 hypothetical protein; 97.5 0.027 5.9E-07 48.1 18.6 202 43-284 8-210 (212)
138 COG1099 Predicted metal-depend 97.4 0.056 1.2E-06 45.3 18.4 217 28-284 17-253 (254)
139 cd01319 AMPD AMP deaminase (AM 97.4 0.0017 3.8E-08 61.8 11.0 97 175-286 351-454 (496)
140 PLN03055 AMP deaminase; Provis 97.3 0.0019 4E-08 62.5 10.9 97 175-286 441-544 (602)
141 TIGR01429 AMP_deaminase AMP de 97.3 0.0051 1.1E-07 59.8 13.3 97 175-286 463-566 (611)
142 PLN02768 AMP deaminase 96.9 0.0095 2.1E-07 59.2 10.7 95 176-285 675-776 (835)
143 COG0418 PyrC Dihydroorotase [N 96.8 0.015 3.2E-07 51.0 10.4 150 117-285 115-304 (344)
144 PTZ00310 AMP deaminase; Provis 96.6 0.019 4.1E-07 60.6 11.0 97 175-286 1134-1237(1453)
145 PTZ00310 AMP deaminase; Provis 96.0 0.04 8.7E-07 58.3 9.9 96 175-285 504-607 (1453)
146 COG2159 Predicted metal-depend 95.3 1.7 3.6E-05 39.1 16.4 158 103-285 126-291 (293)
147 PF07908 D-aminoacyl_C: D-amin 94.8 0.022 4.8E-07 35.7 2.1 29 326-354 18-46 (48)
148 cd01311 PDC_hydrolase 2-pyrone 93.1 5.7 0.00012 35.0 17.1 100 118-232 108-224 (263)
149 cd01301 rDP_like renal dipepti 93.1 1.6 3.4E-05 39.6 11.3 93 120-230 154-266 (309)
150 PRK00912 ribonuclease P protei 93.0 5.6 0.00012 34.5 17.8 108 174-296 105-229 (237)
151 COG1387 HIS2 Histidinol phosph 91.9 7.9 0.00017 33.6 13.8 47 186-232 152-198 (237)
152 COG1831 Predicted metal-depend 91.8 8.3 0.00018 33.6 16.5 136 118-285 143-283 (285)
153 PF04909 Amidohydro_2: Amidohy 91.7 1.1 2.3E-05 39.5 8.5 146 120-284 117-273 (273)
154 PRK07945 hypothetical protein; 91.5 11 0.00024 34.6 16.3 45 186-231 250-295 (335)
155 COG5016 Pyruvate/oxaloacetate 90.1 7.4 0.00016 36.1 12.0 106 26-146 102-212 (472)
156 KOG3020 TatD-related DNase [Re 89.2 11 0.00024 33.7 12.2 157 30-204 40-206 (296)
157 COG2355 Zn-dependent dipeptida 88.2 10 0.00022 34.2 11.5 136 121-283 150-308 (313)
158 PRK14042 pyruvate carboxylase 87.5 5.8 0.00013 39.3 10.4 104 26-144 100-208 (596)
159 PF01244 Peptidase_M19: Membra 86.8 2.3 5E-05 38.8 6.9 133 120-282 160-318 (320)
160 TIGR01856 hisJ_fam histidinol 86.5 12 0.00025 32.9 11.1 43 187-230 191-239 (253)
161 PRK12581 oxaloacetate decarbox 84.2 12 0.00025 36.0 10.3 104 27-145 110-218 (468)
162 PRK08609 hypothetical protein; 83.6 50 0.0011 32.9 16.4 44 187-231 485-529 (570)
163 PRK12330 oxaloacetate decarbox 83.4 15 0.00031 35.7 10.8 104 27-145 102-212 (499)
164 PF04273 DUF442: Putative phos 82.2 10 0.00022 28.6 7.4 47 11-65 11-64 (110)
165 PRK07328 histidinol-phosphatas 78.0 49 0.0011 29.2 14.2 43 187-230 183-231 (269)
166 COG1603 RPP1 RNase P/RNase MRP 77.8 44 0.00096 28.7 11.2 95 185-294 117-223 (229)
167 TIGR01235 pyruv_carbox pyruvat 77.8 22 0.00049 38.4 10.9 111 25-144 628-743 (1143)
168 PRK12595 bifunctional 3-deoxy- 76.8 30 0.00064 32.2 10.3 118 114-232 163-299 (360)
169 PRK08392 hypothetical protein; 75.8 49 0.0011 28.1 14.4 43 187-231 143-185 (215)
170 PRK12331 oxaloacetate decarbox 75.8 24 0.00053 33.8 9.7 103 28-145 102-209 (448)
171 PRK14041 oxaloacetate decarbox 74.7 25 0.00054 33.9 9.4 103 28-145 101-208 (467)
172 TIGR01496 DHPS dihydropteroate 71.1 35 0.00076 30.0 8.9 108 73-203 12-127 (257)
173 TIGR01858 tag_bisphos_ald clas 70.3 76 0.0016 28.4 10.8 34 28-61 88-129 (282)
174 TIGR01108 oadA oxaloacetate de 69.0 38 0.00083 33.7 9.5 102 28-144 97-203 (582)
175 PRK09282 pyruvate carboxylase 68.5 39 0.00084 33.8 9.5 103 27-144 101-208 (592)
176 KOG2902 Dihydroorotase [Nucleo 65.5 21 0.00045 30.7 5.9 111 120-233 117-250 (344)
177 TIGR00167 cbbA ketose-bisphosp 64.0 98 0.0021 27.8 10.3 34 28-61 93-134 (288)
178 PRK00366 ispG 4-hydroxy-3-meth 63.5 1.2E+02 0.0027 27.9 11.1 111 29-143 95-211 (360)
179 PRK09195 gatY tagatose-bisphos 63.3 1.1E+02 0.0024 27.3 11.0 35 27-61 89-131 (284)
180 PRK09248 putative hydrolase; V 61.9 1.1E+02 0.0023 26.6 11.4 45 187-231 146-196 (246)
181 PRK14040 oxaloacetate decarbox 61.8 63 0.0014 32.3 9.5 103 27-144 102-209 (593)
182 PRK07709 fructose-bisphosphate 59.6 1.3E+02 0.0029 26.9 11.4 34 28-61 93-134 (285)
183 COG1038 PycA Pyruvate carboxyl 58.5 1E+02 0.0022 31.8 10.0 112 23-145 631-749 (1149)
184 PRK08610 fructose-bisphosphate 57.6 1.4E+02 0.0031 26.7 11.2 33 29-61 94-134 (286)
185 cd01317 DHOase_IIa Dihydroorot 56.4 96 0.0021 28.9 9.5 107 16-144 30-144 (374)
186 PRK12737 gatY tagatose-bisphos 56.1 1.5E+02 0.0033 26.5 10.9 121 28-151 90-220 (284)
187 PRK13398 3-deoxy-7-phosphohept 55.5 1.5E+02 0.0032 26.3 12.0 72 115-187 73-150 (266)
188 cd07937 DRE_TIM_PC_TC_5S Pyruv 55.3 1.5E+02 0.0033 26.3 10.8 27 117-143 175-202 (275)
189 PRK12738 kbaY tagatose-bisphos 54.6 1.6E+02 0.0035 26.4 11.1 125 24-151 86-220 (286)
190 TIGR00612 ispG_gcpE 1-hydroxy- 54.5 1.7E+02 0.0038 26.7 12.5 108 32-143 90-202 (346)
191 PRK07998 gatY putative fructos 53.9 1.6E+02 0.0036 26.3 10.4 35 27-61 89-131 (283)
192 PF01116 F_bP_aldolase: Fructo 53.6 1.7E+02 0.0036 26.3 10.4 115 27-144 88-216 (287)
193 PRK13404 dihydropyrimidinase; 50.3 1.3E+02 0.0027 29.3 9.4 26 118-143 219-245 (477)
194 TIGR01182 eda Entner-Doudoroff 50.1 1.6E+02 0.0034 24.9 11.7 60 5-68 7-67 (204)
195 PRK08195 4-hyroxy-2-oxovalerat 49.7 1.4E+02 0.003 27.5 9.1 28 117-144 170-200 (337)
196 PRK13397 3-deoxy-7-phosphohept 49.5 1.8E+02 0.0039 25.5 13.9 116 115-231 61-195 (250)
197 cd07945 DRE_TIM_CMS Leptospira 49.4 1.9E+02 0.0042 25.7 10.6 58 82-140 109-167 (280)
198 cd07944 DRE_TIM_HOA_like 4-hyd 48.6 1.5E+02 0.0033 26.1 9.0 25 118-142 165-192 (266)
199 TIGR01361 DAHP_synth_Bsub phos 48.2 1.9E+02 0.0042 25.4 12.4 115 117-232 73-206 (260)
200 PRK12999 pyruvate carboxylase; 48.1 1.5E+02 0.0033 32.3 10.3 108 27-144 632-745 (1146)
201 PRK05835 fructose-bisphosphate 46.4 2.3E+02 0.0049 25.7 13.0 34 28-61 90-131 (307)
202 cd07943 DRE_TIM_HOA 4-hydroxy- 44.4 2E+02 0.0043 25.3 9.1 19 117-135 138-156 (263)
203 cd00947 TBP_aldolase_IIB Tagat 44.3 2.3E+02 0.005 25.2 10.7 33 29-61 86-126 (276)
204 PF02702 KdpD: Osmosensitive K 42.3 63 0.0014 27.3 5.1 114 103-228 4-124 (211)
205 PRK06740 histidinol-phosphatas 42.2 51 0.0011 30.2 5.1 44 187-230 245-294 (331)
206 PF13594 Amidohydro_5: Amidohy 41.6 23 0.00049 23.7 2.1 11 29-39 58-68 (68)
207 COG0191 Fba Fructose/tagatose 41.0 2.7E+02 0.0058 25.0 10.4 170 86-281 30-231 (286)
208 COG3589 Uncharacterized conser 40.6 2.9E+02 0.0064 25.3 9.7 91 103-203 29-122 (360)
209 PRK09856 fructoselysine 3-epim 40.4 2.5E+02 0.0055 24.5 10.9 113 26-141 17-150 (275)
210 PRK05588 histidinol-phosphatas 39.8 62 0.0013 28.3 5.1 44 187-230 172-220 (255)
211 TIGR03217 4OH_2_O_val_ald 4-hy 38.5 2.6E+02 0.0056 25.7 9.1 26 118-143 170-198 (333)
212 TIGR03586 PseI pseudaminic aci 38.1 3.2E+02 0.0069 25.1 10.2 112 117-232 74-204 (327)
213 TIGR01182 eda Entner-Doudoroff 37.7 2.5E+02 0.0054 23.7 9.2 91 116-225 16-106 (204)
214 PRK06552 keto-hydroxyglutarate 36.5 2.7E+02 0.0058 23.7 11.7 170 6-231 13-188 (213)
215 PRK08123 histidinol-phosphatas 36.2 57 0.0012 28.8 4.4 44 187-230 203-252 (270)
216 PRK06015 keto-hydroxyglutarate 35.8 2.7E+02 0.0058 23.5 11.8 59 6-68 4-63 (201)
217 PRK06015 keto-hydroxyglutarate 34.0 2.9E+02 0.0063 23.3 9.2 92 116-226 12-103 (201)
218 cd07938 DRE_TIM_HMGL 3-hydroxy 33.8 3.4E+02 0.0074 24.1 10.6 25 118-142 176-202 (274)
219 PRK07329 hypothetical protein; 33.8 65 0.0014 28.0 4.3 45 187-231 171-220 (246)
220 TIGR00542 hxl6Piso_put hexulos 33.4 3.4E+02 0.0073 23.9 9.9 22 120-141 133-154 (279)
221 TIGR03569 NeuB_NnaB N-acetylne 32.4 4E+02 0.0086 24.5 10.2 112 117-232 73-205 (329)
222 PRK08185 hypothetical protein; 32.2 3.7E+02 0.0081 24.1 10.8 79 108-201 43-129 (283)
223 PLN02727 NAD kinase 32.2 4.2E+02 0.0091 28.2 9.9 38 28-65 274-317 (986)
224 PF05913 DUF871: Bacterial pro 32.2 3.8E+02 0.0082 24.9 9.1 53 89-143 15-70 (357)
225 PRK15108 biotin synthase; Prov 31.9 3.3E+02 0.0072 25.1 8.8 26 116-141 107-132 (345)
226 PRK13669 hypothetical protein; 31.4 96 0.0021 21.6 3.8 30 326-361 44-73 (78)
227 COG2100 Predicted Fe-S oxidore 31.0 1.7E+02 0.0038 26.7 6.3 47 84-133 238-284 (414)
228 PRK07084 fructose-bisphosphate 31.0 4.2E+02 0.009 24.3 12.1 146 28-195 101-262 (321)
229 PRK11858 aksA trans-homoaconit 30.8 4.5E+02 0.0098 24.6 11.0 19 117-135 142-160 (378)
230 PF02571 CbiJ: Precorrin-6x re 30.2 3.7E+02 0.0081 23.5 8.8 155 33-225 64-224 (249)
231 KOG0203 Na+/K+ ATPase, alpha s 30.0 1.3E+02 0.0029 31.1 6.0 108 121-230 594-715 (1019)
232 PF03932 CutC: CutC family; I 29.8 3.4E+02 0.0074 22.9 8.7 24 116-141 99-122 (201)
233 PF07293 DUF1450: Protein of u 29.3 1.1E+02 0.0023 21.4 3.8 29 326-360 44-72 (78)
234 KOG0202 Ca2+ transporting ATPa 29.3 4.6E+02 0.0099 27.5 9.5 49 111-172 578-626 (972)
235 KOG1096 Adenosine monophosphat 28.7 1.2E+02 0.0026 30.4 5.3 75 176-250 612-693 (768)
236 PRK06552 keto-hydroxyglutarate 28.7 3.7E+02 0.0079 22.9 10.7 95 116-227 21-116 (213)
237 PRK10490 sensor protein KdpD; 28.6 3.8E+02 0.0082 28.5 9.5 112 102-225 22-140 (895)
238 cd07941 DRE_TIM_LeuA3 Desulfob 28.4 4.2E+02 0.009 23.4 10.5 29 116-144 176-206 (273)
239 PF07071 DUF1341: Protein of u 27.5 1.7E+02 0.0037 24.6 5.3 50 9-63 155-207 (218)
240 TIGR03178 allantoinase allanto 27.1 1.6E+02 0.0035 28.2 6.1 24 119-142 215-239 (443)
241 PRK12344 putative alpha-isopro 26.9 6.2E+02 0.014 25.0 10.7 31 115-145 182-213 (524)
242 CHL00200 trpA tryptophan synth 26.8 4.5E+02 0.0097 23.2 10.3 20 46-65 107-126 (263)
243 PRK08673 3-deoxy-7-phosphohept 25.8 5.3E+02 0.011 23.7 11.4 117 115-232 139-274 (335)
244 TIGR01244 conserved hypothetic 25.1 3.3E+02 0.0071 21.1 9.6 27 118-144 71-97 (135)
245 PRK08044 allantoinase; Provisi 24.4 1.3E+02 0.0028 28.9 4.8 24 16-43 69-92 (449)
246 COG0159 TrpA Tryptophan syntha 24.3 5E+02 0.011 23.0 10.2 34 32-65 89-129 (265)
247 PLN02389 biotin synthase 24.3 6E+02 0.013 23.9 10.9 24 117-140 210-233 (379)
248 PF13350 Y_phosphatase3: Tyros 24.3 3.7E+02 0.008 21.4 8.8 27 119-145 110-136 (164)
249 PRK12857 fructose-1,6-bisphosp 24.0 5.3E+02 0.011 23.1 10.8 121 28-151 90-220 (284)
250 TIGR03849 arch_ComA phosphosul 24.0 4.2E+02 0.0091 23.0 7.3 103 23-141 19-121 (237)
251 PRK13111 trpA tryptophan synth 23.6 5.1E+02 0.011 22.8 8.8 21 45-65 104-124 (258)
252 COG1105 FruK Fructose-1-phosph 23.6 5.6E+02 0.012 23.3 14.1 107 33-142 48-168 (310)
253 COG0800 Eda 2-keto-3-deoxy-6-p 23.3 4.7E+02 0.01 22.3 7.7 50 173-227 64-113 (211)
254 COG0800 Eda 2-keto-3-deoxy-6-p 23.0 4.8E+02 0.01 22.2 10.8 170 7-231 14-186 (211)
255 TIGR02660 nifV_homocitr homoci 21.4 6.6E+02 0.014 23.3 11.8 28 109-136 131-158 (365)
256 PF01081 Aldolase: KDPG and KH 21.0 3.1E+02 0.0067 23.0 5.8 92 117-227 17-108 (196)
257 PF02007 MtrH: Tetrahydrometha 20.9 3.9E+02 0.0084 24.0 6.5 74 116-200 73-147 (296)
258 PLN02591 tryptophan synthase 20.7 5.8E+02 0.013 22.3 10.4 20 46-65 94-113 (250)
259 PRK07114 keto-hydroxyglutarate 20.5 5.5E+02 0.012 22.0 9.8 96 116-227 23-119 (222)
260 KOG1321 Protoheme ferro-lyase 20.3 6.7E+02 0.015 22.9 8.0 94 8-114 134-237 (395)
261 cd03174 DRE_TIM_metallolyase D 20.2 5.7E+02 0.012 22.1 9.1 22 117-138 143-164 (265)
No 1
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=2.3e-48 Score=367.33 Aligned_cols=344 Identities=28% Similarity=0.427 Sum_probs=299.1
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc---CCHHHHHHHHHHcCCeEEEecccccCCCCCCccc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASW 78 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~ 78 (363)
+|++..+||+...+++|+.|..++.++.+++++||||++|+.. ...+...+++.+.|+|.+.+..+++.+. +
T Consensus 84 ~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~--~--- 158 (435)
T PRK15493 84 PWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGT--K--- 158 (435)
T ss_pred HHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCC--C---
Confidence 6998889999999999999999999999999999999999863 3356778999999999999888776421 1
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCC
Q 017968 79 AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 158 (363)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~ 158 (363)
+.....+.+...+++++... .+++++.++++.+.+++++.++++++.|+++|+++++|+.|...+.+...+.++.
T Consensus 159 --~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~g~-- 233 (435)
T PRK15493 159 --EDEKKAIEEAEKYVKRYYNE-SGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEAQYGK-- 233 (435)
T ss_pred --ccHHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCC--
Confidence 12344556667777776542 4689999999999999999999999999999999999999998888877777764
Q ss_pred ChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCc
Q 017968 159 GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMS 237 (363)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~ 237 (363)
.+++++.+.|+++++.+++||.++++++++++++.|+.+++||.+|.++ .+..|+++++++|+++++|||+.+++.+.+
T Consensus 234 ~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d 313 (435)
T PRK15493 234 RPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKAMLEAGIKVGIATDSVASNNNLD 313 (435)
T ss_pred CHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHHHHhcCcccHHHHHHCCCeEEEccCccccCCCcC
Confidence 5899999999999999999999999999999999999999999999888 899999999999999999999976666788
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCC-CCCCCCcCChh
Q 017968 238 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVPVHDRI 316 (363)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~-~~~~~~~~~~~ 316 (363)
++.+++.+.++++... .....++++++++++|.|||+++|++ ++|+|++|++||||++|.+ .+...|..+++
T Consensus 314 ~~~~~~~a~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~p~~d~~ 386 (435)
T PRK15493 314 MFEEMRIATLLQKGIH------QDATALPVETALTLATKGAAEVIGMK-QTGSLEVGKCADFITIDPSNKPHLQPADEVL 386 (435)
T ss_pred HHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCCCCcCCccChH
Confidence 9999998877765321 12345899999999999999999996 4899999999999999974 46667888999
Q ss_pred hhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhcc
Q 017968 317 TSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLMN 362 (363)
Q Consensus 317 ~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~~ 362 (363)
..+++.+....|.+|||+|++++++|+++++|++++.++.++...+
T Consensus 387 ~~lv~~~~~~~V~~v~V~G~~v~~~g~~~~~d~~~~~~~~~~~~~~ 432 (435)
T PRK15493 387 SHLVYAASGKDISDVIINGKRVVWNGECKTLDEERIIFEASRYKRG 432 (435)
T ss_pred HhEEEeCCCCCccEEEECCEEEEECCeECCCCHHHHHHHHHHHHHH
Confidence 9999998888999999999999999999999999999998877543
No 2
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=2.7e-48 Score=367.52 Aligned_cols=340 Identities=24% Similarity=0.354 Sum_probs=292.4
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc------CCHHHHHHHHHHcCCeEEEecccccCCCCCC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG------QHVSEMAKAVELLGLRACLVQSTMDCGEGLP 75 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~------~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~ 75 (363)
+|+...+||+...+++|++|.+++.++.+++++||||++||.. ...+...+++.+.|+|.++++..++...
T Consensus 87 ~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~--- 163 (441)
T TIGR03314 87 SILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYETSDRDG--- 163 (441)
T ss_pred HHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeeeecCCC---
Confidence 6888889999999999999999999999999999999999852 1246788999999999999888776321
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcC
Q 017968 76 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 155 (363)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~ 155 (363)
+ ......+....+++++++...++++++.++++.+.+++++.++++.++|+++|+++++|+.|...+.+...+.++
T Consensus 164 ~----~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~~~~~~~~g 239 (441)
T TIGR03314 164 G----KEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDVEDSHHKYG 239 (441)
T ss_pred c----ccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHcC
Confidence 1 123445566667777776544578999999999999999999999999999999999999999988888888777
Q ss_pred CCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCC
Q 017968 156 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 234 (363)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~ 234 (363)
. .+++++.+.|+++++.+++||.+++++++++++++|+.+++||.+|+++ .+..|+.+++++|++++||||+.+
T Consensus 240 ~--~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~~l~~G~~p~~~~~~~Gv~v~LGtD~~~--- 314 (441)
T TIGR03314 240 K--DIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNMGNAVGYNPVLRMFKNGILLGLGTDGYT--- 314 (441)
T ss_pred C--CHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHhhhccCCCCHHHHHHCCCEEEEcCCCCC---
Confidence 5 6899999999999999999999999999999999999999999999998 899999999999999999999853
Q ss_pred CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhcc--CCCCccccCCCCcccEEEEcCCCCCCCCc
Q 017968 235 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKADMVVVDPFSWPMVPV 312 (363)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg--~~~~~G~i~~G~~ADlvv~d~~~~~~~~~ 312 (363)
.|++++++++.++++... .+....+.++++|+|.++|+++| +..++|+|++|++|||+++|.+.++..+.
T Consensus 315 -~d~~~em~~a~~~~~~~~-------~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~ 386 (441)
T TIGR03314 315 -SDMFESLKFANFKHKDAG-------GDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTA 386 (441)
T ss_pred -cCHHHHHHHHHHHhcccc-------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeech
Confidence 489999999887776431 11123467899999999999986 44468999999999999999987776777
Q ss_pred CChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 313 HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 313 ~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
.++...+++..+..+|..||++|++++++++++++|++++.++.+++..
T Consensus 387 ~~~~~~lv~~~~~~~V~~v~V~G~~v~~~~~~~~~d~~~i~~~~~~~~~ 435 (441)
T TIGR03314 387 DNINGHILFGMNGGSVDSTMVNGKVVMEDREFLHFDEAPIYARARKLAQ 435 (441)
T ss_pred hhccccceecCCCCeeEEEEECCEEEEECCcccccCHHHHHHHHHHHHH
Confidence 7777778777778899999999999999999999999999998887653
No 3
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=1.6e-47 Score=363.47 Aligned_cols=340 Identities=25% Similarity=0.372 Sum_probs=293.0
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc------CCHHHHHHHHHHcCCeEEEecccccCCCCCC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG------QHVSEMAKAVELLGLRACLVQSTMDCGEGLP 75 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~------~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~ 75 (363)
+|++..+||+...+++||+|.+++.++.+++++||||++|+.. ...+..++++++.|+|.++++..++..
T Consensus 88 ~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~d~~---- 163 (442)
T PRK07203 88 SILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYETSDRD---- 163 (442)
T ss_pred HHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEecccccCC----
Confidence 5788888999999999999999999999999999999999852 123577899999999999887766531
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcC
Q 017968 76 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 155 (363)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~ 155 (363)
........+.+..++++.++...++++...++|+...+++++.+++++++|+++|+++++|+.|...+.+...+.++
T Consensus 164 ---~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~~~~~~~~g 240 (442)
T PRK07203 164 ---GEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDVSDSHKKYG 240 (442)
T ss_pred ---cchhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHHHHHHHHcC
Confidence 11123445666777777776544568999999999999999999999999999999999999999998888888777
Q ss_pred CCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCC
Q 017968 156 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 234 (363)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~ 234 (363)
. .+++++.+.|+++++.+++||.++++++++++++.|+.+++||.+|+++ .+..|+++++++|+++++|||+..
T Consensus 241 ~--~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~--- 315 (442)
T PRK07203 241 K--DIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMGNAVGYNPVLEMIKNGILLGLGTDGYT--- 315 (442)
T ss_pred C--CHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhhcccCCCCHHHHHHCCCeEEEcCCCCC---
Confidence 5 6899999999999999999999999999999999999999999999988 889999999999999999999753
Q ss_pred CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhcc--CCCCccccCCCCcccEEEEcCCCCCCCCc
Q 017968 235 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKADMVVVDPFSWPMVPV 312 (363)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg--~~~~~G~i~~G~~ADlvv~d~~~~~~~~~ 312 (363)
.|++++++.+..+++... .+..++++++++|+|.+||+++| +.++.|+|++|++||||++|.+.+...+.
T Consensus 316 -~d~~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d~~~~~~~~~ 387 (442)
T PRK07203 316 -SDMFESYKVANFKHKHAG-------GDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVDYNPPTPLNE 387 (442)
T ss_pred -ccHHHHHHHHHHHhcccc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEcCCCCeecCc
Confidence 479999998877766421 11224578999999999999998 45578999999999999999987766666
Q ss_pred CChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 313 HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 313 ~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
.+|+..+++..+..+|.+||++|++|+++|+++++|++++.++.+++..
T Consensus 388 ~~~~~~~v~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~i~~~~~~~~~ 436 (442)
T PRK07203 388 DNINGHILFGMNGGSVDTTIVNGKVVMEDRKFLNFDEESIYARARKAAA 436 (442)
T ss_pred cccccceEeecCCCceEEEEECCEEEEECCcccccCHHHHHHHHHHHHH
Confidence 7888888888888999999999999999999999999999999887654
No 4
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=1.6e-46 Score=354.59 Aligned_cols=332 Identities=27% Similarity=0.464 Sum_probs=287.8
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc---CCHHHHHHHHHHcCCeEEEecccccCCCCCCccc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASW 78 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~ 78 (363)
+||+.++||....+++++.+..++.++.+++++||||++|+.. .+.+...+++++.|+|.++++..++..
T Consensus 83 ~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~------- 155 (419)
T PRK06687 83 EWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSE------- 155 (419)
T ss_pred HHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCC-------
Confidence 6999889999889999999999999999999999999999853 346778899999999998877665421
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCC
Q 017968 79 AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 158 (363)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~ 158 (363)
.......+++..++++++.....+.++++++++.+.+++++.++++++.|+++|+++++|+.+...+.....+.++.
T Consensus 156 -~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~~g~-- 232 (419)
T PRK06687 156 -TETTAETISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKRYGK-- 232 (419)
T ss_pred -cccHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHCc--
Confidence 11234556677777777665445678999999999999999999999999999999999999998777777776665
Q ss_pred ChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCc
Q 017968 159 GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMS 237 (363)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~ 237 (363)
.+++++.+.|+++++.+++||.++++++++++++.|+.+++||.+|.++ .+..|+++++++|+++++|||+.+++.+.+
T Consensus 233 ~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~~ 312 (419)
T PRK06687 233 RPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASGIAPIIQLQKAGVAVGIATDSVASNNNLD 312 (419)
T ss_pred CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhhhhccCCCcHHHHHHCCCeEEEeCCCCCCCCChh
Confidence 5888999999999999999999999999999999999999999999988 889999999999999999999876666778
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCC-CCCCCCcCChh
Q 017968 238 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVPVHDRI 316 (363)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~-~~~~~~~~~~~ 316 (363)
++.+++.+..+++... .....++++++++|+|.+||+++|+++++|+|++|++|||+++|.+ .+...|..+|+
T Consensus 313 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~p~~~~~ 386 (419)
T PRK06687 313 MFEEGRTAALLQKMKS------GDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVIQPQGKIHLQPQENML 386 (419)
T ss_pred HHHHHHHHHHHhcccc------CCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEECCCCCCCcCCccCHH
Confidence 9999998776665321 1233589999999999999999999877899999999999999986 46677888999
Q ss_pred hhhhccccCCCccEEEEccEEEEECCeecccCH
Q 017968 317 TSLVYCMRTENVVSVMCNGQWVMKNKKILLLMR 349 (363)
Q Consensus 317 ~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~ 349 (363)
..+++..+..+|..||++|++|+++|+++++|+
T Consensus 387 ~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~ 419 (419)
T PRK06687 387 SHLVYAVKSSDVDDVYIAGEQVVKQGQVLTVEL 419 (419)
T ss_pred HHhheeCCCCCccEEEECCEEEEECCeEecCCC
Confidence 999999999999999999999999999999884
No 5
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=5.4e-45 Score=347.02 Aligned_cols=351 Identities=34% Similarity=0.563 Sum_probs=297.7
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc-CCHHHHHHHHHHcCCeEEEecccccCCCCCCccccc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 80 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~ 80 (363)
+|++..+|++...+++++.+..++.++.+++++||||++|+.. ......++++.+.|+|.+.++..++.+. ..+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~-~~p~~~~ 159 (445)
T PRK07228 81 DWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGD-DVPEGLQ 159 (445)
T ss_pred HHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccChHHHHHHHHHcCCeEEEecceecCCc-CCCcccc
Confidence 5888889999999999999999999999999999999999874 3467788999999999988888776431 1112222
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCCh
Q 017968 81 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 160 (363)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 160 (363)
......+++..++++.+.+...+.+...++++....++++.++++++.|+++|+++++|+.+.....+...+..|. .+
T Consensus 160 ~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~--~~ 237 (445)
T PRK07228 160 EDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEETGM--RN 237 (445)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCC--CH
Confidence 3455667777888887754444567777788877788999999999999999999999999888777776666655 57
Q ss_pred HHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcHH
Q 017968 161 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIV 239 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~ 239 (363)
++++...++++++.+++|++++++++++++++.|+.+++||.+++.+ .+..|++++++.|+++++|||+++++...+++
T Consensus 238 ~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~~~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~ 317 (445)
T PRK07228 238 IHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASGIAPVPDLLERGINVALGADGAPCNNTLDPF 317 (445)
T ss_pred HHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHHhhhcccccCcHHHHHHCCCeEEEcCCCCccCCCccHH
Confidence 89999999999999999999999999999999999999999999877 78999999999999999999998765567899
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcC--Chhh
Q 017968 240 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH--DRIT 317 (363)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~--~~~~ 317 (363)
.+++.+.++++... .....++++++++|+|.|||+++|+++++|+|++|++|||||+|.+.++..|.+ +|+.
T Consensus 318 ~~~~~~~~~~~~~~------~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~~~~~~~ 391 (445)
T PRK07228 318 TEMRQAALIQKVDR------LGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSHGVDVLS 391 (445)
T ss_pred HHHHHHHHHhhhcc------CCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCcccCHHH
Confidence 99887766654321 112358999999999999999999977789999999999999999988877877 8888
Q ss_pred hhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 318 SLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 318 ~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
.+++.....+|..||++|++++++|+++++|++++.++..+...
T Consensus 392 ~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~~ 435 (445)
T PRK07228 392 HLVYAAHGSDVETTMVDGKIVMEDGELTTIDADAVRREANRSIK 435 (445)
T ss_pred HhheeCCCCCeeEEEECCEEEEECCeEccCCHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999887654
No 6
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=6.9e-45 Score=345.79 Aligned_cols=350 Identities=25% Similarity=0.334 Sum_probs=294.4
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc--------CCHHHHHHHHHHcCCeEEEecccccCCCC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQSTMDCGEG 73 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~gir~~~~~~~~~~~~~ 73 (363)
+|+....|++...++++++|..++.++.+|+++||||++|+.. ...+..++++++.|+|.++++..++...+
T Consensus 86 ~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~ 165 (457)
T PRK12393 86 AWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVLCRGGATQTRG 165 (457)
T ss_pred HHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEEEccccccccc
Confidence 7998888999888999999999999999999999999999842 23577889999999999988776643222
Q ss_pred CCc----ccccCChHHHHHHHHHHHHHhcCCC-CCCeEEEeccCcc-ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhH
Q 017968 74 LPA----SWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 147 (363)
Q Consensus 74 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~ 147 (363)
.++ ....+.....+.+...+++.++... .+++.+.++++.. .+++++.++++++.|++.|+++++|+.+...+.
T Consensus 166 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~~~H~~e~~~~~ 245 (457)
T PRK12393 166 DHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRLHSHLSETVDYV 245 (457)
T ss_pred cCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeEEEEeCCCHHHH
Confidence 111 1122345556666777777765432 3467888888886 788999999999999999999999999988777
Q ss_pred HHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEe
Q 017968 148 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 226 (363)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lg 226 (363)
+...+.++. .+++++...|+++++.+++||.++++++++++++.|+.+++||.+|+++ .+..|++++++.|+++++|
T Consensus 246 ~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~v~lG 323 (457)
T PRK12393 246 DFCREKYGM--TPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSNGRLGSGIAPALAMEAAGVPVSLG 323 (457)
T ss_pred HHHHHHhCC--CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhhhhhcccCCCHHHHHHCCCeEEEe
Confidence 777666664 5889999999999999999999999999999999999999999999888 8899999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCC
Q 017968 227 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 306 (363)
Q Consensus 227 TD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~ 306 (363)
||+..++...+++.+++.+...++.. .....++++++++++|.|||+++|++ ++|+|++|++|||+++|.+.
T Consensus 324 tD~~~~~~~~d~~~~~~~a~~~~~~~-------~~~~~~~~~~~l~~~T~~~A~~l~~~-~~G~l~~G~~ADlvv~d~~~ 395 (457)
T PRK12393 324 VDGAASNESADMLSEAHAAWLLHRAE-------GGADATTVEDVVHWGTAGGARVLGLD-AIGTLAVGQAADLAIYDLDD 395 (457)
T ss_pred cCCcccCCCccHHHHHHHHHHHhhhc-------CCCCCCCHHHHHHHHhHHHHHHhCCC-CCCCcCCCCcCCEEEEeCCC
Confidence 99876655688999998876665421 11235899999999999999999996 47999999999999999998
Q ss_pred CCCCCcCChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 307 WPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
+...|..+|....+...+..+|..||++|++++++++++++|++++.+..+++..
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~i~~~~~~~~~ 450 (457)
T PRK12393 396 PRFFGLHDPAIAPVACGGPAPVKALLVNGRPVVENGAIPGLDLAELRHDARAAVR 450 (457)
T ss_pred cccCCCCCchhhhhccCCCCCeeEEEECCEEEEECCccCCCCHHHHHHHHHHHHH
Confidence 8877877888777777778899999999999999999999999999999887654
No 7
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=7.4e-45 Score=343.54 Aligned_cols=342 Identities=37% Similarity=0.592 Sum_probs=294.8
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
+|++...||+...++++++|..++.++.+++++||||++|+. .+.....+++.+.|+|.+++++.++.. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~-~~~~~~~~a~~~~GiR~~~~~~~~d~~-------~~~ 151 (430)
T PRK06038 80 EWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMY-FYMDEVAKAVEESGLRAALSYGMIDLG-------DDE 151 (430)
T ss_pred HHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccc-cCHHHHHHHHHHhCCeEEEEchhccCC-------Ccc
Confidence 588888888888899999999999999999999999999987 456678889999999998877665432 112
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 161 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 161 (363)
.....+++..++++.+....++.+.++++++....++++.++++++.|+++|+++++|+.+...........+|. .++
T Consensus 152 ~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~G~--~~i 229 (430)
T PRK06038 152 KGEAELKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKEQYGM--CSV 229 (430)
T ss_pred chHHHHHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHHHhCC--CHH
Confidence 344556677777777765556788888999998899999999999999999999999999998777766666665 588
Q ss_pred HHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHH
Q 017968 162 TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVD 240 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~ 240 (363)
+++++.|+++++.+++||.++++++++++++.|+.+++||.++++. .+..|+.++++.|+++++|||+.+++...|++.
T Consensus 230 ~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~ 309 (430)
T PRK06038 230 NYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASGIAPVPKLLERGVNVSLGTDGCASNNNLDMFE 309 (430)
T ss_pred HHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhhhccCCCCHHHHHHCCCeEEEeCCCCccCCCcCHHH
Confidence 9999999999999999999999999999999999999999999887 789999999999999999999876555678999
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhh
Q 017968 241 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLV 320 (363)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~ 320 (363)
+++.+...++... .....+++.++++|+|.|||+++|++ .|+|++|+.||||++|.+.+...|..+|...++
T Consensus 310 ~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~gA~~lg~~--~G~l~~G~~ADlvvld~~~~~~~p~~~~~~~~v 381 (430)
T PRK06038 310 EMKTAALLHKVNT------MDPTALPARQVLEMATVNGAKALGIN--TGMLKEGYLADIIIVDMNKPHLTPVRDVPSHLV 381 (430)
T ss_pred HHHHHHHHhhhcc------CCCCcCCHHHHHHHHhHHHHHHhCCC--CCccCCCcccCEEEEeCCCCccCCCCChHHhee
Confidence 9988776655321 12345899999999999999999994 599999999999999999877778888888888
Q ss_pred ccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 321 YCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 321 ~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
+.+...+|..||++|+++|++|+++++|++++.++.++...
T Consensus 382 ~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~~ 422 (430)
T PRK06038 382 YSASGSDVDTTIVDGRILMEDYKVLCMDEQDVMEDAKKAAE 422 (430)
T ss_pred EeCCCCceeEEEECCEEEEECCeECCCCHHHHHHHHHHHHH
Confidence 87778899999999999999999999999999999887653
No 8
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.5e-45 Score=343.55 Aligned_cols=343 Identities=33% Similarity=0.533 Sum_probs=294.8
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
+||+.+.||....+++++++..++.++.+++++||||++|+. .+.+..++++.+.|+|.+..++.++... + .
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~~--~-----~ 150 (424)
T PRK08393 79 EWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-FHMEEVAKATLEVGLRGYLSYGMVDLGD--E-----E 150 (424)
T ss_pred HHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-cCHHHHHHHHHHhCCeEEEeceEecCCC--c-----c
Confidence 688888999888899999999999999999999999999987 5678889999999999988877654321 1 1
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 161 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 161 (363)
.....+++..++++.++....+.+...++++.+..++++.++++++.|++.|+++++|+.+...+.....+.+|. .++
T Consensus 151 ~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~--~~~ 228 (424)
T PRK08393 151 KREKEIKETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREKYGK--SPV 228 (424)
T ss_pred chHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCc--CHH
Confidence 223445555566666665555678888899998889999999999999999999999999999888888777775 689
Q ss_pred HHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHH
Q 017968 162 TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVD 240 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~ 240 (363)
+++.+.|+++++.+++|+.++++++++++++.|+.+++||.+|.++ .+..|+.+++++|+++++|||...++.+.+++.
T Consensus 229 ~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~d~~~ 308 (424)
T PRK08393 229 VLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVNVALGTDGAASNNNLDMLR 308 (424)
T ss_pred HHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHHhhccCCCCHHHHHHCCCcEEEecCCCccCCchhHHH
Confidence 9999999999999999999999999999999999999999999888 889999999999999999999876555568999
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhh
Q 017968 241 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLV 320 (363)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~ 320 (363)
+++.+..+.+... .....+++.++++|+|.|||+++|++ .|+|++|++||||++|.+.+...|..+|+..++
T Consensus 309 ~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~~~ 380 (424)
T PRK08393 309 EMKLAALLHKVHN------LDPTIADAETVFRMATQNGAKALGLK--AGVIKEGYLADIAVIDFNRPHLRPINNPISHLV 380 (424)
T ss_pred HHHHHHHHHhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccCEEEEeCCCCCcCCCCChHHHee
Confidence 9988765544321 11223689999999999999999995 499999999999999999888888889999998
Q ss_pred ccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhcc
Q 017968 321 YCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLMN 362 (363)
Q Consensus 321 ~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~~ 362 (363)
+.++..+|..||++|+++|++|+++++|++++.+..+++...
T Consensus 381 ~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~~~ 422 (424)
T PRK08393 381 YSANGNDVETTIVDGKIVMLDGEVLTLDEEKILDKFLKVIEK 422 (424)
T ss_pred eeCCCCCeeEEEECCEEEEECCeECCCCHHHHHHHHHHHHHh
Confidence 888888999999999999999999999999999998877653
No 9
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=2.6e-44 Score=341.49 Aligned_cols=343 Identities=33% Similarity=0.534 Sum_probs=290.6
Q ss_pred CccccccccCc-CCCCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCccccc
Q 017968 2 TWLHDRIWPYE-SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 80 (363)
Q Consensus 2 ~~~~~~~~~~~-~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~ 80 (363)
+|++...||.. ..+++++.+..++.++.+++++||||++|+. .+.+...+++.+.|+|.+.+...++. |..+ .
T Consensus 91 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~G~R~~~~~~~~~~----~~~~-~ 164 (443)
T PRK09045 91 TWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-FFPEAAAEAAHQAGMRAQIGMPVLDF----PTAW-A 164 (443)
T ss_pred HHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-ccHHHHHHHHHHcCCeEEEecccccC----CCcc-c
Confidence 58887777765 4579999999999999999999999999986 45667788999999999888877653 2222 2
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCCh
Q 017968 81 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 160 (363)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 160 (363)
...++.++...++.+++.+ .+++++.++++...+++++.++++++.|++.|+++++|+.+...+.....+.+|. .+
T Consensus 165 ~~~~~~l~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~--~~ 240 (443)
T PRK09045 165 SDADEYLAKGLELHDQWRH--HPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADSLKQHGQ--RP 240 (443)
T ss_pred cCHHHHHHHHHHHHHHhcC--CCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHHHHHhCC--CH
Confidence 3455566666677777653 5789999999998899999999999999999999999999877766666655554 57
Q ss_pred HHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcHH
Q 017968 161 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIV 239 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~ 239 (363)
++.+.+.|+++++.+++||.++++++++++++.|+.+++||.++++. .+..|++++++.|+++++|||+++++.+.+++
T Consensus 241 ~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~~~~~~~~~~~~l~~~Gv~v~lGtD~~~~~~~~~~~ 320 (443)
T PRK09045 241 LARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKLASGFCPVAKLLQAGVNVALGTDGAASNNDLDLF 320 (443)
T ss_pred HHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHhhhccCCCcHHHHHHCCCeEEEecCCCCCCCCccHH
Confidence 89999999999999999999999999999999999999999998776 67899999999999999999988765567899
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhh
Q 017968 240 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSL 319 (363)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~ 319 (363)
.+++.+....+... .....++++++++++|.|||+++|+++++|+|++|+.||||++|.+.+...|..++...+
T Consensus 321 ~~~~~a~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~p~~~~~~~l 394 (443)
T PRK09045 321 GEMRTAALLAKAVA------GDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLETQPVYDPVSQL 394 (443)
T ss_pred HHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCcCCccChHhHh
Confidence 98887755544220 123458999999999999999999987789999999999999999988777777888888
Q ss_pred hccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHh
Q 017968 320 VYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 360 (363)
Q Consensus 320 ~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~ 360 (363)
++.....+|..||++|++||++|+++++|++++.++.+++-
T Consensus 395 v~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 435 (443)
T PRK09045 395 VYAAGREQVSHVWVAGKQLLDDRELTTLDEAELLARARQWR 435 (443)
T ss_pred hEeCCCCCccEEEECCEEEEECCcCCCCCHHHHHHHHHHHH
Confidence 78777889999999999999999999999999999988764
No 10
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=6.3e-44 Score=337.01 Aligned_cols=332 Identities=32% Similarity=0.478 Sum_probs=280.0
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
+|+.. .||+...+++|+++..++.++.+++++||||++|+. ...+..++++.+.|+|.++++..++... ..
T Consensus 79 ~~~~~-~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~~--~~----- 149 (418)
T PRK06380 79 EFLMK-TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLY-YSEDIIAKAAEELGIRAFLSWAVLDEEI--TT----- 149 (418)
T ss_pred HHHHH-HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccc-cChHHHHHHHHHhCCeEEEecccccCCc--cc-----
Confidence 68886 789999999999999999999999999999999987 4567788999999999999888775321 10
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 161 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 161 (363)
...........+++++.. .+++++.++++...+++++.++++++.|+++|+++++|+.+...+.......+|. .++
T Consensus 150 ~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~--~~i 225 (418)
T PRK06380 150 QKGDPLNNAENFIREHRN--EELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRTGE--RPV 225 (418)
T ss_pred ccchHHHHHHHHHHHhcC--CCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHhCC--CHH
Confidence 011233445566666542 4678989999998899999999999999999999999999987665555555554 589
Q ss_pred HHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-c-CcccHHHHHHcCCeEEEecCCCCCCCCCcHH
Q 017968 162 TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L-GFAPIKEMLHADICVSLGTDGAPSNNRMSIV 239 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~-~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~ 239 (363)
+++...++++.+.++.|+.++++++++++++.|+.+++||.+++++ . +..|++++++.|+++++|||...++...+++
T Consensus 226 e~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~~g~~p~~~~~~~Gv~v~lGTD~~~~~~~~d~~ 305 (418)
T PRK06380 226 EHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFKLGTGGSPPIPEMLDNGINVTIGTDSNGSNNSLDMF 305 (418)
T ss_pred HHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHHhhccCCCCcHHHHHHCCCeEEEcCCCCcCCCCcCHH
Confidence 9999999999999999999999999999999999999999999887 4 7899999999999999999986555567899
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCC--cCChhh
Q 017968 240 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP--VHDRIT 317 (363)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~--~~~~~~ 317 (363)
.+++++....+... .....+++.++++|+|.|+|+++|+ +.|+|++|++||||++|.+.+...| ..+|+.
T Consensus 306 ~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~p~~~~~~~~ 377 (418)
T PRK06380 306 EAMKFSALSVKNER------WDASIIKAQEILDFATINAAKALEL--NAGSIEVGKLADLVILDARAPNMIPTRKNNIVS 377 (418)
T ss_pred HHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCC--CCCccCCCccCCEEEEeCCCCccCCCCccChHH
Confidence 99987765543221 1122489999999999999999999 3699999999999999998777777 468899
Q ss_pred hhhccccCCCccEEEEccEEEEECCeecccCHHHHHH
Q 017968 318 SLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQ 354 (363)
Q Consensus 318 ~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~ 354 (363)
.+++..+..+|..||++|++++++|+++++|++++..
T Consensus 378 ~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~ 414 (418)
T PRK06380 378 NIVYSLNPLNVDHVIVNGKILKENGRLNGFNPDEFID 414 (418)
T ss_pred heeecCCCCceeEEEECCEEEEECCeECccCHHHHhh
Confidence 9988888889999999999999999999999998865
No 11
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=9.6e-44 Score=338.61 Aligned_cols=348 Identities=29% Similarity=0.467 Sum_probs=291.3
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc-------CCHHHHHHHHHHcCCeEEEecccccCCC--
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLVQSTMDCGE-- 72 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~~gir~~~~~~~~~~~~-- 72 (363)
+|++. .++....+++++++..++.++.+++++|||||+|+.. ..++..++++.+.|+|.+.+...++...
T Consensus 86 ~~~~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~~ 164 (451)
T PRK08203 86 PWLTT-LYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSMSLGESD 164 (451)
T ss_pred HHHHH-HhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEecceeecCCcc
Confidence 57764 5777888999999999999999999999999999752 1256788999999999998876665331
Q ss_pred -CCCcccccCChHHHHHHHHHHHHHhcCCC-CCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHH
Q 017968 73 -GLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 150 (363)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~ 150 (363)
+.++....+...+.++...++++++.... .++++++++++.+.+++.+.++++++.|+++|+++++|+.+...+....
T Consensus 165 ~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~ 244 (451)
T PRK08203 165 GGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETLDEEAFC 244 (451)
T ss_pred CCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHH
Confidence 12222223345566777778887765433 3689999999998899999999999999999999999999888776666
Q ss_pred HhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCC
Q 017968 151 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDG 229 (363)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~ 229 (363)
.+.++. .+++++.+.|+++++.+++|+.++++++++++++.|+.+++||.++.++ .+..+++++++.|+++++|||+
T Consensus 245 ~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~~~l~~~~~~~~~~~~~Gv~v~lGtD~ 322 (451)
T PRK08203 245 LERFGM--RPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSNMRLASGIAPVRELRAAGVPVGLGVDG 322 (451)
T ss_pred HHHhCC--CHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHhhhhccCCCCHHHHHHCCCeEEEecCC
Confidence 655665 5889999999999999999999999999999999999999999999887 7899999999999999999998
Q ss_pred CCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCC
Q 017968 230 APSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM 309 (363)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~ 309 (363)
+.++...+++.+++.+...++... ....+++.++++++|.|||+++|++ ++|+|++|+.|||+++|.+.+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~ 394 (451)
T PRK08203 323 SASNDGSNLIGEARQALLLQRLRY-------GPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLADLALFDLDELRF 394 (451)
T ss_pred CccCCCcCHHHHHHHHHHHhhccc-------CCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCccCEEEEcCCcccc
Confidence 765455789999887766554221 1235899999999999999999997 68999999999999999998777
Q ss_pred CCcCChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 310 VPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
.+.++|+..+++.. ..+|..||++|++++++++++++|++++.++..++..
T Consensus 395 ~~~~~p~~~l~~~~-~~~v~~v~v~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 445 (451)
T PRK08203 395 AGAHDPVAALVLCG-PPRADRVMVGGRWVVRDGQLTTLDLAALIARHRAAAR 445 (451)
T ss_pred CCccChHHHHHccC-CCCccEEEECCEEEEECCcccCCCHHHHHHHHHHHHH
Confidence 77788988887754 5789999999999999999999999999998887654
No 12
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=100.00 E-value=7.6e-44 Score=338.23 Aligned_cols=347 Identities=17% Similarity=0.229 Sum_probs=277.9
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc--------------CCHHHHHHHHHHcCCeEEEeccc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVELLGLRACLVQST 67 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~--------------~~~~~~~~~~~~~gir~~~~~~~ 67 (363)
+|++ .+||+...+++|++|..++.++.+++++||||++|+.. ...+..++++++.|+|..++..+
T Consensus 81 ~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G~R~~~~~~~ 159 (455)
T TIGR02022 81 TWRE-LMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAGIGLTLLPVF 159 (455)
T ss_pred HHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHhCCeEEeeeee
Confidence 5876 57898889999999999999999999999999999642 12467889999999999887766
Q ss_pred ccCCC--CCCcccc----cCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEecc
Q 017968 68 MDCGE--GLPASWA----VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 68 ~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
++... +.|+... ....+........+.+.++. .+.+.+.++++...+++++.++++++ ++++|+++++|+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~~g~~v~~H~~ 236 (455)
T TIGR02022 160 YAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAA--QPAAVLGLAPHSLRAVTPEQLAAVLQ-ASDRQAPVHIHVA 236 (455)
T ss_pred eecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhcc--CCceEEEEecCCCCcCCHHHHHHHHH-HHhCCCceEEEEC
Confidence 64321 1222110 01122222233333333332 35688889999888999999999999 8899999999999
Q ss_pred CChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcC
Q 017968 142 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHAD 220 (363)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G 220 (363)
|...+.....+.+|. .+++++.+.|+++++.++.||.++++++++++++.|+.+++||.+|+.+ .+..|+++++++|
T Consensus 237 e~~~e~~~~~~~~G~--~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~pi~~l~~~G 314 (455)
T TIGR02022 237 EQQKEVDDCLAWSGR--RPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTEANLGDGIFPAVDFVAAG 314 (455)
T ss_pred CChHHHHHHHHHhCC--CHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhhccccCCCCCHHHHHHCC
Confidence 988887777776665 5899999999999999999999999999999999999999999999988 8899999999999
Q ss_pred CeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCC-CCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccE
Q 017968 221 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT-TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADM 299 (363)
Q Consensus 221 ~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADl 299 (363)
+++++|||..+ ..+++++++.+...++......... .....++.+++|+|+|.|+|+++|+ + +|+|++||+|||
T Consensus 315 v~v~lGTD~~~---~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~-~-~GsLe~Gk~ADl 389 (455)
T TIGR02022 315 GRFGIGSDSHV---VIDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL-A-TGGLRAGARADF 389 (455)
T ss_pred CeEEEECCCCC---CCCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC-C-CCccCCCCCcCE
Confidence 99999999754 3589999998877665421000000 1122467889999999999999999 3 799999999999
Q ss_pred EEEcCCCCCCCCc--CChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 300 VVVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 300 vv~d~~~~~~~~~--~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
|++|.+.+...|. ++|+..+++.....+|..|||+|++|+++|+++ ++++|.+...+++.
T Consensus 390 vvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~--~~~~~~~~~~~~~~ 451 (455)
T TIGR02022 390 LTLDGDHPYLAGALGDSLLDRWLFAGGGAAVRDVWVGGRWVVRDGRHA--LREEIGRAFARVLR 451 (455)
T ss_pred EEEeCCCcccCCCCchhHHHHHhhcCCCCCccEEEECCEEEEECCccc--cHHHHHHHHHHHHH
Confidence 9999987666553 578889999988899999999999999999996 77778888887754
No 13
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=100.00 E-value=1.8e-43 Score=336.49 Aligned_cols=347 Identities=18% Similarity=0.229 Sum_probs=278.9
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC--------------CHHHHHHHHHHcCCeEEEeccc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGLRACLVQST 67 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~--------------~~~~~~~~~~~~gir~~~~~~~ 67 (363)
+|++ .+||+...+++|+++..++.++.+++++||||++|+... ..+..++++++.|+|..++...
T Consensus 81 ~w~~-~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~GiR~~~~~~~ 159 (456)
T PRK09229 81 SWRE-LMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARAAGIGLTLLPVL 159 (456)
T ss_pred HHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHHcCCEEEeceee
Confidence 5875 578888899999999999999999999999999987421 1367789999999999888777
Q ss_pred ccCCC--CCCccc----ccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEecc
Q 017968 68 MDCGE--GLPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 68 ~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
++... +.|+.. ..+..+......+++.+.++. .+++.++++++...+++++.++++++.| ++|+++++|+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~A-~~g~~i~~H~~ 236 (456)
T PRK09229 160 YAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAA--LPGARLGLAPHSLRAVTPDQLAAVLALA-APDGPVHIHIA 236 (456)
T ss_pred eecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCHHHHHHHHHHh-cCCCceEEEeC
Confidence 76421 112210 011223233333344444432 4689999999998899999999999999 99999999999
Q ss_pred CChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcC
Q 017968 142 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHAD 220 (363)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G 220 (363)
+...+.....+.++. .+++.+.+.++++++.+++||.++++++++++++.|+.+++||.+|+++ .+..|+++++++|
T Consensus 237 e~~~e~~~~~~~~g~--~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~p~~~l~~~G 314 (456)
T PRK09229 237 EQTKEVDDCLAWSGA--RPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPTTEANLGDGIFPAVDYLAAG 314 (456)
T ss_pred CCHHHHHHHHHHcCC--CHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECchhhhhhcCCCCCHHHHHHCC
Confidence 888777777766665 5789999999999999999999999999999999999999999999888 8999999999999
Q ss_pred CeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCC-CCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccE
Q 017968 221 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT-TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADM 299 (363)
Q Consensus 221 ~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADl 299 (363)
+++++|||.+. ..+++.+++.+...++......... .....+++.++++|+|.|+|+++|+ .+|+|++||+|||
T Consensus 315 v~v~lGtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~--~~GsLe~Gk~ADl 389 (456)
T PRK09229 315 GRFGIGSDSHV---SIDLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR--AIGGLAVGARADL 389 (456)
T ss_pred CeEEEecCCCC---CCCHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC--CcCCcCCCCccCE
Confidence 99999999754 3589999998876655321100000 1113578999999999999999999 4799999999999
Q ss_pred EEEcCCCCCCCCc--CChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 300 VVVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 300 vv~d~~~~~~~~~--~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
|++|.+.+...|. ++|...+++.....+|..|||+|++||++|+. +|+++|.++.++...
T Consensus 390 vvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~--~d~~~i~~~~~~~~~ 451 (456)
T PRK09229 390 VVLDLDHPALAGREGDALLDRWVFAGGDAAVRDVWVAGRWVVRDGRH--RLREAIAAAFRAALA 451 (456)
T ss_pred EEEeCCCccccCCChhhHHHHHhhcCCCCCeeEEEECCEEEEECCcc--CCHHHHHHHHHHHHH
Confidence 9999987655543 58889999988889999999999999999985 589999888877653
No 14
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.2e-42 Score=333.07 Aligned_cols=347 Identities=24% Similarity=0.339 Sum_probs=284.8
Q ss_pred CccccccccC-------cCCCCchhHHHHHHHHHHHHHhCCceEeecCCc----------CCHHHHHHHHHHcCCeEEEe
Q 017968 2 TWLHDRIWPY-------ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----------QHVSEMAKAVELLGLRACLV 64 (363)
Q Consensus 2 ~~~~~~~~~~-------~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~----------~~~~~~~~~~~~~gir~~~~ 64 (363)
+|+....|+. ...+++|++|..++.++.+++++||||++|+.. ...+..++++.+.|+|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~GiR~~~~ 159 (488)
T PRK06151 80 GWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVYLG 159 (488)
T ss_pred hHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcCCeEEec
Confidence 4666666664 246899999999999999999999999998742 12467788999999999888
Q ss_pred cccccCCCC------CCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeE
Q 017968 65 QSTMDCGEG------LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 138 (363)
Q Consensus 65 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 138 (363)
+..++.... ..+..........+.+..++++++...+.+.++.+++++....++.+.++++++.|+++|+++++
T Consensus 160 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~v~~ 239 (488)
T PRK06151 160 PAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAARELGCPVRL 239 (488)
T ss_pred chhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 765542111 00111111233456677777888766556789999999988889999999999999999999999
Q ss_pred eccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCCh---------hHHHHHHhCCCeEEEChhhhccc-c
Q 017968 139 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---------TEIGLLSRAGVKVSHCPASAMRM-L 208 (363)
Q Consensus 139 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---------~~~~~~~~~g~~v~~~p~~~~~~-~ 208 (363)
|+.+...+.+...+.++. .+++++.+.|+++.+.+++||.++++ ++++++++.|+.+++||.++.+. .
T Consensus 240 H~~e~~~~~~~~~~~~g~--~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~ 317 (488)
T PRK06151 240 HCAQGVLEVETVRRLHGT--TPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAEHGVSIVHCPLVSARHGS 317 (488)
T ss_pred EECCchHHHHHHHHHcCC--CHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHhcCCEEEECchhhhhhcc
Confidence 999887777666666554 58899999999999999999999999 99999999999999999998877 7
Q ss_pred CcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCc
Q 017968 209 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 288 (363)
Q Consensus 209 ~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~ 288 (363)
+..|+.++++.|+++++|||..+ .+++..++.+....+... .....++++++++++|.|||+++|+++ +
T Consensus 318 ~~~p~~~l~~~Gv~v~lGtD~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~lg~~~-~ 386 (488)
T PRK06151 318 ALNSFDRYREAGINLALGTDTFP----PDMVMNMRVGLILGRVVE------GDLDAASAADLFDAATLGGARALGRDD-L 386 (488)
T ss_pred ccccHHHHHHCCCcEEEECCCCC----ccHHHHHHHHHHHHHHhc------CCCCCCCHHHHHHHHHHHHHHHhCCCC-C
Confidence 88999999999999999999743 378888887665543221 112348999999999999999999975 7
Q ss_pred cccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 289 GSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 289 G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
|+|++|+.|||+|+|.+.+...|..+|+..+++..+..+|..||++|++||++|+++++|++++.++.++...
T Consensus 387 G~I~~G~~ADlvvld~~~~~~~~~~d~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~~ 459 (488)
T PRK06151 387 GRLAPGAKADIVVFDLDGLHMGPVFDPIRTLVTGGSGRDVRAVFVDGRVVMEDGRLPGVDLAALRAQAQQQFD 459 (488)
T ss_pred cccCCCCcCCEEEEeCCccccCCccCHHHHHHhhCCCCCccEEEECCEEEEECCeecCCCHHHHHHHHHHHHH
Confidence 9999999999999999988777888899999888888899999999999999999999999999999886654
No 15
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-42 Score=330.59 Aligned_cols=347 Identities=25% Similarity=0.323 Sum_probs=283.5
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc-----CCHHHHHHHHHHcCCeEEEecccccCCCCCCc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPA 76 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~-----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~ 76 (363)
+|+....+++...+++++.+..++.++.+++++||||+++++. ......++++.+.|+|.+++...++.. +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~~~----~ 157 (449)
T PRK08204 82 TYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGPS----P 157 (449)
T ss_pred HHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccCCC----C
Confidence 5777777888999999999999999999999999999999753 234567889999999998877665432 1
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCC
Q 017968 77 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 156 (363)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~ 156 (363)
.+..........+...+++++....++.+...+.++....++++.+.++++.|++.|+++++|+.+.... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~---------~ 228 (449)
T PRK08204 158 YWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG---------A 228 (449)
T ss_pred CCCcchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc---------c
Confidence 2222223344556666677766554556777777777777889999999999999999999999876432 1
Q ss_pred CCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 157 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
....++.+.+.++++.+.+++|+.++++++++++++.|+.+++||.++.++ .+..|+.+++++|+++++|||+.+. .+
T Consensus 229 ~~~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~~~~~~~~~~~~Gv~v~lGtD~~~~-~~ 307 (449)
T PRK08204 229 TPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGHGYPVTGRLLAHGVRPSLGVDVVTS-TG 307 (449)
T ss_pred CCCHHHHHHHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHhhhcCCCCcHHHHHhcCCceeeccccCCC-CC
Confidence 224778888999999999999999999999999999999999999998877 7789999999999999999997654 34
Q ss_pred CcHHHHHHHHHHHhccccccc---C--CCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC
Q 017968 236 MSIVDEMYLASLINKGREVFA---N--GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 310 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~ 310 (363)
.+++.+++.+...++...... + .......+++.++++|+|.|+|+++|+++++|+|++|+.|||||+|.+.+...
T Consensus 308 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld~~~~~~~ 387 (449)
T PRK08204 308 GDMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLIDATDLNLA 387 (449)
T ss_pred cCHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCcccc
Confidence 689999988776554321100 0 00123568999999999999999999987789999999999999999988888
Q ss_pred CcCChhhhhhccccCCCccEEEEccEEEEECCeecccCHHHHHHHHHHHhcc
Q 017968 311 PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLMN 362 (363)
Q Consensus 311 ~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~~ 362 (363)
|..+|+..+++..+..+|..||++|++|+++++++++|++++.++..+...+
T Consensus 388 p~~dp~~~lv~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~~~~~~~~~~~~ 439 (449)
T PRK08204 388 PVHDPVGAVVQSAHPGNVDSVMVAGRAVKRNGKLLGVDLERLRRLAAASRDR 439 (449)
T ss_pred CCcChhhhheeccCCCCceEEEECCEEEEECCEeccCCHHHHHHHHHHHHHH
Confidence 8889999988888889999999999999999999999999999998877543
No 16
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=8.5e-43 Score=329.04 Aligned_cols=325 Identities=23% Similarity=0.286 Sum_probs=274.7
Q ss_pred CccccccccCcCC-CCchhHHHHHHHHHHHHHhCCceEeecCCcC---CHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 017968 2 TWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 77 (363)
Q Consensus 2 ~~~~~~~~~~~~~-~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~ 77 (363)
+|++..+||++.. .++++.+..++.++.+++++||||++|+... ..+...+++++.|+|.++++..++.. .+.
T Consensus 94 ~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~--~~~- 170 (433)
T PRK09228 94 DWLNTYTFPEERRFADPAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIAGKVLMDRN--APD- 170 (433)
T ss_pred HHHHhhhhHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEeeeeeecCC--CCc-
Confidence 6888888897765 4889999999999999999999999997543 45677889999999999988877542 121
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHc-CCeeeEeccCChhhHHHHHhhcCC
Q 017968 78 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKV 156 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~ 156 (363)
...+.....+++..++++++.. .+++++.++|+..++++++.++++.++|+++ |+++++|+.|...+.+...+.++.
T Consensus 171 ~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~e~~~~~~~~g~ 248 (433)
T PRK09228 171 GLRDTAESGYDDSKALIERWHG--KGRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSENLDEIAWVKELFPE 248 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHhC--CCCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecCChhHHHHHHHHcCC
Confidence 1122345556677777777654 3578888999998899999999999999998 999999999999888888887776
Q ss_pred CCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 157 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
...+++++++.|+++++.+++||.++++++++++++.|+.+++||.+|+++ .+..++.++++.|+++++|||... +..
T Consensus 249 ~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~v~lGtD~~~-~~~ 327 (433)
T PRK09228 249 ARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNLFLGSGLFDLKRADAAGVRVGLGTDVGG-GTS 327 (433)
T ss_pred CCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHHhhcCCCcCHHHHHHCCCeEEEecCCCC-CCC
Confidence 556799999999999999999999999999999999999999999999888 889999999999999999999864 235
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCC-C----
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM-V---- 310 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~-~---- 310 (363)
.+++.+++.+..+++. ....++++++++|+|.|||+++|+++++|+|++|++||||++|.+..+. .
T Consensus 328 ~d~~~~~~~~~~~~~~---------~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv~d~~~~~~~~~~~~ 398 (433)
T PRK09228 328 FSMLQTMNEAYKVQQL---------QGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEADFVVLDPAATPLLALRTA 398 (433)
T ss_pred CCHHHHHHHHHHHhhc---------ccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCCCEEEEcCCCCccccchhc
Confidence 7899999887766543 1234899999999999999999998778999999999999999876332 2
Q ss_pred ---CcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 311 ---PVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 311 ---~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+..||+..+++++...+|..|||+|++|+++
T Consensus 399 ~~~~~~d~~~~lv~~~~~~~V~~v~VdG~~v~~~ 432 (433)
T PRK09228 399 RAESLEELLFALMTLGDDRAVAETYVAGRPVYRR 432 (433)
T ss_pred ccCCHHHHHHHHhhcCCccceeEEEECCEEeccC
Confidence 2357899999999999999999999999864
No 17
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=1.9e-41 Score=320.00 Aligned_cols=326 Identities=24% Similarity=0.332 Sum_probs=272.2
Q ss_pred CccccccccCcCC-CCchhHHHHHHHHHHHHHhCCceEeecCCcC---CHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 017968 2 TWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 77 (363)
Q Consensus 2 ~~~~~~~~~~~~~-~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~ 77 (363)
+|+++.+||.... .++++.+..++.++.+++++||||++++... ..+..++++.+.|+|.++++..++.. .| .
T Consensus 90 ~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~--~~-~ 166 (429)
T cd01303 90 DWLETYTFPEEAKFADPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRN--AP-E 166 (429)
T ss_pred HHHHhhhhHHHHhcCCHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCC--CC-c
Confidence 6888888888766 5889999999999999999999999998643 45678899999999999887766532 12 1
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcC-CeeeEeccCChhhHHHHHhhcCC
Q 017968 78 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKV 156 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~v~~H~~~~~~~~~~~~~~~~~ 156 (363)
.......+.+.+..++++++... .+.+.+.++++...+++.+.+++++++|++.| +++++|+.+...+.+...+.++.
T Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~-~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~~g~ 245 (429)
T cd01303 167 YYRDTAESSYRDTKRLIERWHGK-SGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKELFPG 245 (429)
T ss_pred ccccCHHHHHHHHHHHHHHHhCc-CCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHHcCC
Confidence 11223445566677777777653 46788889999999999999999999999999 99999999988887777777664
Q ss_pred CCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 157 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
...+++++.+.|+++++.+++||.++++++++++++.|+.+++||.+|+.+ .+..++.++++.|+++++|||+.+. .+
T Consensus 246 ~~~p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~ 324 (429)
T cd01303 246 ARDYLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLFLGSGLFDVRKLLDAGIKVGLGTDVGGG-TS 324 (429)
T ss_pred CCCHHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhhhccCCCCHHHHHHCCCeEEEeccCCCC-CC
Confidence 457999999999999999999999999999999999999999999999888 8899999999999999999998654 34
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC-Cc--
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV-PV-- 312 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~-~~-- 312 (363)
.+++++++.+...++.... .......++++++++|+|.|||+++|+++++|+|++|++||||++|.+.+... |.
T Consensus 325 ~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~~ 401 (429)
T cd01303 325 FSMLDTLRQAYKVSRLLGY---ELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVIDPSATPLLADRMF 401 (429)
T ss_pred ccHHHHHHHHHHHHHhhcc---ccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEcCCCccccccccc
Confidence 6899999887665543210 01123468999999999999999999987789999999999999999876433 53
Q ss_pred -----CChhhhhhccccCCCccEEEEcc
Q 017968 313 -----HDRITSLVYCMRTENVVSVMCNG 335 (363)
Q Consensus 313 -----~~~~~~~~~~~~~~~v~~v~~~G 335 (363)
.||+..+++.....+|..|||+|
T Consensus 402 ~~~~~~d~~~~lV~~~~~~~V~~v~V~G 429 (429)
T cd01303 402 RVESLEEALFKFLYLGDDRNIREVYVAG 429 (429)
T ss_pred cccchhhHHHHHeeeCCCCCeeEEEeCC
Confidence 68999999999999999999998
No 18
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=4.3e-41 Score=311.86 Aligned_cols=309 Identities=21% Similarity=0.262 Sum_probs=249.8
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
+|+++. ++....+++|+.|..++.++.+++++||||++|+.. ..+ .+++..+.|+|.++++..++.. +..
T Consensus 56 ~wl~~~-~~~~~~~~~e~~~~~a~~~~~E~l~~G~Tt~~d~~~-~~~-~~~a~~~~GiR~~~~~~~~~~~---~~~---- 125 (381)
T cd01312 56 AWLLSV-INSRDELLKQPWEEAIRQGIRQMLESGTTSIGAISS-DGS-LLPALASSGLRGVFFNEVIGSN---PSA---- 125 (381)
T ss_pred HHHHHH-HHHHHhcChHHHHHHHHHHHHHHHHhCCeEEEEecC-CHH-HHHHHHHcCCcEEEEEeeECCC---Cch----
Confidence 688764 466678999999999999999999999999999873 333 7889999999999998887532 111
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcC------
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK------ 155 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~------ 155 (363)
......+..+.++++....++++++.++++.+.+++++.+++++++|+++|+++++|+.|...+.+...+..+
T Consensus 126 -~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~ 204 (381)
T cd01312 126 -IDFKGETFLERFKRSKSFESQLFIPAISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFW 204 (381)
T ss_pred -hhhhHHHHHHHHHHhhccCccceEEEECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHh
Confidence 1111222222333332223578999999999999999999999999999999999999999888776654321
Q ss_pred ----------CCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEE
Q 017968 156 ----------VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVS 224 (363)
Q Consensus 156 ----------~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~ 224 (363)
....+++++.+.|+++++.+++||.++++++++++++.|+.+++||.+|+++ .+..|+.++++.|++++
T Consensus 205 ~~~~~~~~~~~g~~pv~~l~~~g~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~lg~g~~p~~~~~~~Gv~v~ 284 (381)
T cd01312 205 ESFLKLPKPKKLATAIDFLDMLGGLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGGKLDVSELKKAGIPVS 284 (381)
T ss_pred hhhcccccccCCCCHHHHHHHcCCCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhhhhcCCCcCHHHHHHCCCcEE
Confidence 0336899999999999999999999999999999999999999999999888 78899999999999999
Q ss_pred EecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcC
Q 017968 225 LGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDP 304 (363)
Q Consensus 225 lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~ 304 (363)
+|||+..++...+++.+++.+....+.. ...+++.++++|+|.|+|+++|++ .|+|++|++||||++|.
T Consensus 285 lGtD~~~~~~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~ADlvv~d~ 353 (381)
T cd01312 285 LGTDGLSSNISLSLLDELRALLDLHPEE---------DLLELASELLLMATLGGARALGLN--NGEIEAGKRADFAVFEL 353 (381)
T ss_pred EeCCCCccCCCCCHHHHHHHHHHhcccc---------cccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcccEEEEeC
Confidence 9999876656679999999876655421 113678999999999999999994 79999999999999998
Q ss_pred CCCCCCCcCChhhhhhccccCCCccEEEEccE
Q 017968 305 FSWPMVPVHDRITSLVYCMRTENVVSVMCNGQ 336 (363)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~ 336 (363)
+.+ ..|..+++..+ + ...+|..|||+||
T Consensus 354 ~~~-~~~~~~~~~~~-~--~~~~v~~v~v~G~ 381 (381)
T cd01312 354 PGP-GIKEQAPLQFI-L--HAKEVRHLFISGK 381 (381)
T ss_pred CCc-CCCCccHHHHH-H--ccCCCCEEEecCC
Confidence 876 33555665433 3 3469999999996
No 19
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=9.6e-41 Score=314.19 Aligned_cols=324 Identities=20% Similarity=0.273 Sum_probs=258.6
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc--------------CCHHHHHHHHHHcCCeEEEeccc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVELLGLRACLVQST 67 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~--------------~~~~~~~~~~~~~gir~~~~~~~ 67 (363)
+|++ ..+++...+++|++|..++.++.+++++||||++|+.. ...+..++++.+.|+|.+++...
T Consensus 72 ~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~ 150 (418)
T cd01313 72 TWRE-LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVL 150 (418)
T ss_pred hHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeE
Confidence 6775 46888889999999999999999999999999998742 11356789999999999888776
Q ss_pred ccCCC--CCCcccc----cCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEecc
Q 017968 68 MDCGE--GLPASWA----VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 68 ~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
+++.. +.++... .......++...+.++.+. ..+++.++++++...+++++.++++++.|++ |+++++|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~ 227 (418)
T cd01313 151 YARAGFGGPAPNPGQRRFINGYEDFLGLLEKALRAVK--EHAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLA 227 (418)
T ss_pred EeccCCCCCCCchhhhhhcccHHHHHHHHHHHhhhhc--cCCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeC
Confidence 65421 1111000 0111222222333333333 2467888899999889999999999999999 999999999
Q ss_pred CChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcC
Q 017968 142 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHAD 220 (363)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G 220 (363)
+...+.......++. .+++.+.+.|+++++..++||.++++++++++++.|+.+++||.+++++ .+..|+++++++|
T Consensus 228 e~~~e~~~~~~~~g~--~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~p~~~l~~~G 305 (418)
T cd01313 228 EQPKEVDDCLAAHGR--RPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEANLGDGIFPAAALLAAG 305 (418)
T ss_pred CCHHHHHHHHHHcCC--CHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhhccCCCCCHHHHHHCC
Confidence 887776666666664 5899999999999999999999999999999999999999999999988 8899999999999
Q ss_pred CeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEE
Q 017968 221 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMV 300 (363)
Q Consensus 221 ~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlv 300 (363)
+++++|||.+.. .+++.+++.+..+++....-.........+++.++++|+|.|+|+++|++ +|+|++||+||||
T Consensus 306 v~v~lGtD~~~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~ADlv 380 (418)
T cd01313 306 GRIGIGSDSNAR---IDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARADLL 380 (418)
T ss_pred CcEEEecCCCCC---cCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCccCEE
Confidence 999999996543 57999998877665432100000111236899999999999999999995 7999999999999
Q ss_pred EEcCCCCCCCCc--CChhhhhhccccCCCccEEEEccE
Q 017968 301 VVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQ 336 (363)
Q Consensus 301 v~d~~~~~~~~~--~~~~~~~~~~~~~~~v~~v~~~G~ 336 (363)
++|.+.++..|. ++|+..+++++...+|..|||+|+
T Consensus 381 vld~~~~~~~p~~~~~~~~~lv~~~~~~~V~~v~V~G~ 418 (418)
T cd01313 381 SLDLDHPSLAGALPDTLLDAWVFAAGDREVRDVVVGGR 418 (418)
T ss_pred EEcCCCccccCCCchhHHHHHeecCCCCceeEEEeCCC
Confidence 999998887776 579999999999999999999996
No 20
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=6.1e-40 Score=308.39 Aligned_cols=319 Identities=24% Similarity=0.355 Sum_probs=268.0
Q ss_pred CccccccccCcCC-CCchhHHHHHHHHHHHHHhCCceEeecCCcCC---HHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 017968 2 TWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPAS 77 (363)
Q Consensus 2 ~~~~~~~~~~~~~-~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~ 77 (363)
+|++...||.... .++++.+..++.++.+++++||||++|++..+ .+...+++++.|+|.+.+...++.. +|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~--~~~- 145 (401)
T TIGR02967 69 EWLEKYTFPTEARFADPDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRN--APD- 145 (401)
T ss_pred HHHhhCcCccccccCCHHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCC--CCc-
Confidence 5887777777765 48999999999999999999999999987544 3567889999999998877766532 222
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHc-CCeeeEeccCChhhHHHHHhhcCC
Q 017968 78 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKV 156 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~ 156 (363)
...+......++.+++++++.. .+.++++++++....++.+.++++++.|+++ |+++++|+.+...+.+...+.++.
T Consensus 146 ~~~~~~~~~~~~~~~~i~~~~~--~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~ 223 (401)
T TIGR02967 146 YLRDTAESSYDESKALIERWHG--KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPE 223 (401)
T ss_pred ccccCHHHHHHHHHHHHHHHhC--cCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCC
Confidence 1122345556677777777654 3578888999988889999999999999999 999999999988888888777776
Q ss_pred CCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 157 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
...+++++++.|+++.+.++.||.++++++++++++.|+.+++||.+++++ .+..++++++++|+++++|||.... ..
T Consensus 224 ~~~~~~~l~~~g~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~~~~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~ 302 (401)
T TIGR02967 224 AKDYLDVYDHYGLLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSGLFNLKKALEHGVRVGLGTDVGGG-TS 302 (401)
T ss_pred CCcHHHHHHHCCCCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHHHhccCCCCHHHHHHCCCeEEEecCCCCC-CC
Confidence 556799999999999999999999999999999999999999999999888 8899999999999999999997643 34
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCC----
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP---- 311 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~---- 311 (363)
.+++++++.+...++.. ..++++.++++|+|.|||+++|+++++|+|++|++||||++|.+.+...|
T Consensus 303 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d~~~~~~~~~~~~ 373 (401)
T TIGR02967 303 FSMLQTLREAYKVSQLQ---------GARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLDPAATPLLALRFE 373 (401)
T ss_pred cCHHHHHHHHHHHhhhc---------CCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEcCCCCcccccccc
Confidence 68999988776655432 23589999999999999999999877899999999999999998765543
Q ss_pred ----cCChhhhhhccccCCCccEEEEcc
Q 017968 312 ----VHDRITSLVYCMRTENVVSVMCNG 335 (363)
Q Consensus 312 ----~~~~~~~~~~~~~~~~v~~v~~~G 335 (363)
..||+..+++.+...+|..|||+|
T Consensus 374 ~~~~~~~~~~~~v~~~~~~~v~~v~v~G 401 (401)
T TIGR02967 374 GADTLEDKLFKLMYLGDDRNVAETYVAG 401 (401)
T ss_pred cccchhhHHHHheeecCccceeEEEeCC
Confidence 468999999999999999999998
No 21
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=2.4e-39 Score=306.07 Aligned_cols=330 Identities=42% Similarity=0.653 Sum_probs=270.7
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
+||+.++++.....++++++..++.++.+++++||||++|+.....+...++.++.|+|.....+.++.. ... ..
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~----~~~-~~ 155 (411)
T cd01298 81 EWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLG----TED-VE 155 (411)
T ss_pred HHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccchHHHHHHHHHhCCeEEEEcceecCC----Ccc-cc
Confidence 6888888888888999999999999999999999999999874333566778888999988777766432 111 12
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 161 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 161 (363)
.....+++..++++.+.....+.++++++++.....+++.+.++++.|+++|+++++|+.+.....+...+..+. ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~--~~~ 233 (411)
T cd01298 156 ETEEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGK--RPV 233 (411)
T ss_pred cHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhCC--CHH
Confidence 344556666677766654445678888888887778899999999999999999999998887766666655554 367
Q ss_pred HHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHH
Q 017968 162 TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVD 240 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~ 240 (363)
+.+.+.+.++.+..+.|+.++++++++++++.|+.+++||.++.++ ....|+++++++|+++++|||++++..+.+++.
T Consensus 234 ~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~~~~~~~~~~~~~~~~Gv~~~~GsD~~~~~~~~~~~~ 313 (411)
T cd01298 234 EYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLASGIAPVPEMLEAGVNVGLGTDGAASNNNLDMFE 313 (411)
T ss_pred HHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhhhhhhCCCCHHHHHHCCCcEEEeCCCCccCCCcCHHH
Confidence 7778888888888999999999999999999999999999998776 678899999999999999999976544568898
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhh
Q 017968 241 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLV 320 (363)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~ 320 (363)
+++.+.+..+.. ...+.+++++++++++|.|||+++|++ ++|+|++|++||||++|.+..+..+.+++...+.
T Consensus 314 ~~~~~~~~~~~~------~~~~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~ 386 (411)
T cd01298 314 EMRLAALLQKLA------HGDPTALPAEEALEMATIGGAKALGLD-EIGSLEVGKKADLILIDLDGPHLLPVHDPISHLV 386 (411)
T ss_pred HHHHHHHHhccc------cCCCCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCCCccCCEEEEeCCCCccCCccchhhHhe
Confidence 888765554321 111235899999999999999999997 6899999999999999999877777788888877
Q ss_pred ccccCCCccEEEEccEEEEECCeec
Q 017968 321 YCMRTENVVSVMCNGQWVMKNKKIL 345 (363)
Q Consensus 321 ~~~~~~~v~~v~~~G~~v~~~~~~~ 345 (363)
+.....+|..||++|++|+++|+++
T Consensus 387 ~~~~~~~v~~v~~~G~~v~~~~~~~ 411 (411)
T cd01298 387 YSANGGDVDTVIVNGRVVMEDGELL 411 (411)
T ss_pred EecCCCCeeEEEECCEEEEECCEeC
Confidence 7777789999999999999999864
No 22
>PRK08418 chlorohydrolase; Provisional
Probab=100.00 E-value=2.6e-39 Score=302.84 Aligned_cols=310 Identities=20% Similarity=0.196 Sum_probs=243.0
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
+||+..+++.. .+++++.+..++.++.+++++||||+.|+.... ...+++.+.|+|.+++...++. ++..
T Consensus 83 ~wl~~~~~~~~-~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~--~~~~a~~~~GiR~~~~~~~~~~----~~~~--- 152 (408)
T PRK08418 83 PWLGSVINHRE-DLLEKCKGALIQQAINEMLKSGVGTIGAISSFG--IDLEICAKSPLRVVFFNEILGS----NASA--- 152 (408)
T ss_pred HHHHHHhhhhh-hcCHHHHHHHHHHHHHHHHhcCceEEEEeecch--hhHHHHHhcCCeEEEEeeeeCC----Cccc---
Confidence 68887666664 588999999999999999999999999986432 3368899999999886655432 1111
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCC-----
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV----- 156 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~----- 156 (363)
.........+.++.......+++++.+++|.+.+++++.++++.++|+++|+++++|+.|...+.+.....+|.
T Consensus 153 -~~~~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~~~~~~ 231 (408)
T PRK08418 153 -VDELYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGWFKKFF 231 (408)
T ss_pred -hhhhHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCchhhhh
Confidence 11111122222222211134678999999999999999999999999999999999999999888877766552
Q ss_pred ---------CCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEe
Q 017968 157 ---------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 226 (363)
Q Consensus 157 ---------~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lg 226 (363)
..++++++...+ +++.+++||.+++++|++++++.|+.+++||.+|+++ .+..|+.++++.|+++++|
T Consensus 232 ~~~~~~~~~~~~pv~~l~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~~lg~g~~p~~~~~~~Gi~v~lG 309 (408)
T PRK08418 232 EKFLKEPKPLYTPKEFLELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNRLLSNKALDLEKAKKAGINYSIA 309 (408)
T ss_pred hhhcccccccCCHHHHHHHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHHHhcCCCccHHHHHhCCCeEEEe
Confidence 125788888776 5678999999999999999999999999999999988 8899999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCC
Q 017968 227 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 306 (363)
Q Consensus 227 TD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~ 306 (363)
||+.+++.+.+++++++.+.+.++.. ....+++++++|+|.|+|+++|++ .|+|++|++||||++|.+.
T Consensus 310 tD~~~~~~~~~~~~em~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~G~l~~G~~ADlv~~d~~~ 378 (408)
T PRK08418 310 TDGLSSNISLSLLDELRAALLTHANM---------PLLELAKILLLSATRYGAKALGLN--NGEIKEGKDADLSVFELPE 378 (408)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHhccC---------CccccHHHHHHHHHHHHHHHhCCC--CccccCCCccCEEEEeCCC
Confidence 99877766789999999876655421 111347899999999999999994 5999999999999999864
Q ss_pred CCCCCcCChhhhhhccccCCCccEEEEccEEE
Q 017968 307 WPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 338 (363)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v 338 (363)
....+.+.|+..+. ...+|..||++|++|
T Consensus 379 ~~~~~~~~~~~~~~---~~~~v~~v~v~G~~v 407 (408)
T PRK08418 379 ECTKKEQLPLQFIL---HAKEVKKLFIGGKEV 407 (408)
T ss_pred CCCChhHhHHHHHh---ccCccceEEECCEEc
Confidence 32223444554443 346899999999986
No 23
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.5e-39 Score=305.02 Aligned_cols=328 Identities=33% Similarity=0.522 Sum_probs=280.6
Q ss_pred CccccccccCcCC-CCchhHHHHHHHHHHHHHhCCceEeecCCc---CCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 017968 2 TWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 77 (363)
Q Consensus 2 ~~~~~~~~~~~~~-~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~ 77 (363)
+|++..+||.... +++++++..++.++.+++++||||+..+.. .+.....+++.+.|+|.+.+..+++.. +|+.
T Consensus 82 ~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~--~p~~ 159 (421)
T COG0402 82 EWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVA--FPDP 159 (421)
T ss_pred HHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCC--CCcc
Confidence 7999999998877 799999999999999999999999665542 334457889999999999999988754 3333
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCC
Q 017968 78 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 157 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 157 (363)
...... . +++.+++++.+... +++.++++|+...+++++.++.+.+++++.|+++++|+.|+..+.+.....++.
T Consensus 160 ~~~~~~-~-~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~~~g~- 234 (421)
T COG0402 160 GAETDE-E-LEETEELLREAHGL--GRDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVLEPYGA- 234 (421)
T ss_pred cccchH-H-HHHHHHHHHHHhcC--CCeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHhhcCC-
Confidence 332211 1 56677888887754 378889999999999999999999999999999999999999999998875665
Q ss_pred CChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCC
Q 017968 158 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRM 236 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~ 236 (363)
.+.+++...|+++.+.++.||.|.++.+++++++.|+.+++||.+|+++ .+..|++++++.|+++++|||...+++..
T Consensus 235 -~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~L~sG~~p~~~~~~~gv~v~~gTD~~~~~~~~ 313 (421)
T COG0402 235 -RPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSGIAPVRRLLERGVNVALGTDGAASNNVL 313 (421)
T ss_pred -CHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhccccCCCCCHHHHHHcCCCEEEecCCccccChH
Confidence 6899999999999999999999999999999999999999999999999 88999999999999999999999887778
Q ss_pred cHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChh
Q 017968 237 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRI 316 (363)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~ 316 (363)
|+|.+++.+.++++..... .....+. ++++|+|.|+|++||+ ++.|+|++|++||||++|.+.+...+.. +.
T Consensus 314 d~l~~~~~a~~l~~~~~~~-----~~~~~~~-~~l~~aT~~gA~alg~-~~~G~le~G~~ADlvvld~~~~~~~~~~-~~ 385 (421)
T COG0402 314 DMLREMRTADLLQKLAGGL-----LAAQLPG-EALDMATLGGAKALGL-DDIGSLEVGKKADLVVLDASAPHLAPLR-PV 385 (421)
T ss_pred HHHHHHHHHHHHHHhhcCC-----CcccchH-HHHHHHHhhHHHHcCC-cccCCcccccccCEEEEcCCCCcccccc-HH
Confidence 9999999999988765211 1111222 4899999999999998 5789999999999999999987655655 77
Q ss_pred hhhhccccCCCccEEEEccEEEEECCeec
Q 017968 317 TSLVYCMRTENVVSVMCNGQWVMKNKKIL 345 (363)
Q Consensus 317 ~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 345 (363)
..+++......|..|+++|+.++++++..
T Consensus 386 ~~~v~~~~~~~v~~v~~~g~~v~~~~~~~ 414 (421)
T COG0402 386 SRLVFAAGGKDVDRVLVDGRLVMEDGRLL 414 (421)
T ss_pred HHHHHhcCCCceeEEEECCEEEEEcceeh
Confidence 78888888889999999999999999876
No 24
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-40 Score=290.97 Aligned_cols=331 Identities=27% Similarity=0.363 Sum_probs=282.6
Q ss_pred CCccccccccCcCCCCc-hhHHHHHHHHHHHHHhCCceEeecCCcCCHH---HHHHHHHHcCCeEEEecccccCCCCCCc
Q 017968 1 MTWLHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQHVS---EMAKAVELLGLRACLVQSTMDCGEGLPA 76 (363)
Q Consensus 1 ~~~~~~~~~~~~~~~~~-ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~gir~~~~~~~~~~~~~~~~ 76 (363)
++|+.++.||....++. |+.|......+++|+++|+||+..+...+++ -+++++.+.|+|+..+..+|+.+. +++
T Consensus 98 l~wl~~~~f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~-~~~ 176 (439)
T KOG3968|consen 98 LQWLGKYTFPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNA-HAV 176 (439)
T ss_pred HHHhhcceeecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCC-CCC
Confidence 37999999999999988 7777777789999999999999988765554 668999999999999999998763 455
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCC
Q 017968 77 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 156 (363)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~ 156 (363)
.++....+..+...++++........+.+...+.|.....|+.+.+++..++|+..++++++|+.+...+++...+.++.
T Consensus 177 p~~~~~~E~si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~ 256 (439)
T KOG3968|consen 177 PKGVETTEESIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPE 256 (439)
T ss_pred CccchhHHHHHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhh
Confidence 55555677778888888777766556666665667777788889999999999999999999999999999999998888
Q ss_pred CCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 157 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
.......+...+++++..+++|+.|++++++..++++|+.+.+||.+|..+ .+.++++++++.|+++.+|||.++.
T Consensus 257 ~~~y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~~L~sG~~~vr~lL~~~v~VgLGtDv~~~--- 333 (439)
T KOG3968|consen 257 KLSYTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNSILGSGIPRVRELLDIGVIVGLGTDVSGC--- 333 (439)
T ss_pred cccchHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchhhhccCCccHHHHHhcCceEeecCCcccc---
Confidence 888899999999999999999999999999999999999999999999998 9999999999999999999999863
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCC----CC
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM----VP 311 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~----~~ 311 (363)
.+..+++.+.+..+...... ....+|+++++.+||.|+|+++|+++..|++++||.+|++++|.+.+.. .+
T Consensus 334 -s~l~a~r~A~~~s~hL~~~~----~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~fDai~id~s~~~~~l~~~~ 408 (439)
T KOG3968|consen 334 -SILNALRQAMPMSMHLACVL----DVMKLSMEEALYLATIGGAKALGRDDTHGSLEVGKYFDAIIIDLSAPESPLYRFS 408 (439)
T ss_pred -ccHHHHHHHHHHHHHHHhcc----CcccCCHHHHHHHHhccchhhccCCCcccceecccccceEEEeCCCCcchhhhcc
Confidence 46666766655555432211 3456999999999999999999999889999999999999999987632 23
Q ss_pred -cCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 312 -VHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 312 -~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
.++.++.+++.+.+.++..|||+|+.|+.
T Consensus 409 ~~~~lI~~~v~~g~drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 409 GHHDLISKVVYNGDDRNIAEVFVAGKLVKQ 438 (439)
T ss_pred chHHHHHHHHhcCCCCceEEEEEccEEecc
Confidence 56788999999999999999999999874
No 25
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=9.2e-36 Score=276.70 Aligned_cols=284 Identities=20% Similarity=0.306 Sum_probs=227.4
Q ss_pred cCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCC---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHH
Q 017968 12 ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQ 88 (363)
Q Consensus 12 ~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (363)
...+++++++..++.++.+++++||||++|+.... ++.+.+++.+.|+|..+... +... ..+...+
T Consensus 88 ~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~~~~~~~~~~a~~~~~~r~~~~~~--------~~~~---~~~~~~~ 156 (375)
T PRK07213 88 LNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGGIKGINLLKKASSDLPIKPIILGR--------PTEA---DENELKK 156 (375)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcChhHHHHHHHHHHcCCCceEEecC--------CCcc---cchhhHH
Confidence 45789999999999999999999999999974322 45566777888888753110 1000 1112222
Q ss_pred HHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhC
Q 017968 89 SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 168 (363)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (363)
..+..++. .. .++++....++.+.++++++.|+++|+++++|+.|...+.....+.+|. .+++.+.+.|
T Consensus 157 ~~~~~~~~----~~-----g~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~G~--~~v~~~~~~G 225 (375)
T PRK07213 157 EIREILKN----SD-----GIGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSLEKYGM--TEIERLINLG 225 (375)
T ss_pred HHHHHHHh----cc-----cccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHHHHcCC--ChHHHHHhcC
Confidence 22222221 11 1445555677899999999999999999999999998887777777775 5788888889
Q ss_pred CCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHH
Q 017968 169 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 247 (363)
Q Consensus 169 ~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~ 247 (363)
+. ++ .+.|+.++++++++++++.|+.+++||.+|+.+ .+..|++++++.|+++++|||+.+.+ ..+++++++.+..
T Consensus 226 ~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~l~~g~~~v~~l~~~Gv~v~lGTD~~~~~-~~~~~~e~~~~~~ 302 (375)
T PRK07213 226 FK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANASFNVGLPPLNEMLEKGILLGIGTDNFMAN-SPSIFREMEFIYK 302 (375)
T ss_pred CC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhhhccCCccHHHHHHCCCEEEEeeCCCCCc-hHhHHHHHHHHHH
Confidence 86 55 589999999999999999999999999999988 88999999999999999999987553 4578888887542
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCC
Q 017968 248 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTEN 327 (363)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~ 327 (363)
.. ++++.++++|+|.|+|+++|++ +.|+|++|++||||++|.+. ..|..||+..++++....+
T Consensus 303 ~~--------------~~~~~~~l~~aT~~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~--~~p~~dp~~~lV~~~~~~~ 365 (375)
T PRK07213 303 LY--------------HIEPKEILKMATINGAKILGLI-NVGLIEEGFKADFTFIKPTN--IKFSKNPYASIITRCESGD 365 (375)
T ss_pred Hh--------------CcCHHHHHHHHHHHHHHHhCCC-CcCCcCCCCcccEEEEcCcc--ccccCCchHHHhhhccCCC
Confidence 22 3789999999999999999996 48999999999999999864 4477899999999999999
Q ss_pred ccEEEEccEE
Q 017968 328 VVSVMCNGQW 337 (363)
Q Consensus 328 v~~v~~~G~~ 337 (363)
|..|+|+||+
T Consensus 366 v~~v~v~G~~ 375 (375)
T PRK07213 366 IVNKILKGKL 375 (375)
T ss_pred ceEEEECCcC
Confidence 9999999984
No 26
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=1.2e-31 Score=255.68 Aligned_cols=309 Identities=18% Similarity=0.177 Sum_probs=201.9
Q ss_pred CCCchhHHHHHHHHHHHHHhCCceEeecCCcCCH-HHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHH
Q 017968 14 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 92 (363)
Q Consensus 14 ~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (363)
..++|+++..++++ +.+||||++||..... ....++.+..+ +.......++.+. ... ........+.+..+
T Consensus 67 ~~~~e~~~~~~~~a----~~~GvTtv~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~--~~~-~~~~~~~~~~~~~~ 138 (447)
T cd01314 67 TVTADDFESGTRAA----AAGGTTTIIDFAIPNKGQSLLEAVEKWR-GKADGKSVIDYGF--HMI-ITDWTDSVIEELPE 138 (447)
T ss_pred ccCcchHHHHHHHH----HhCCCcEEEeCCCCCCCCCHHHHHHHHH-HHhcCCCcccEEE--EEe-ecCCChHHHHHHHH
Confidence 46789999999888 7899999999874222 11111111111 1001111122110 000 00112233444444
Q ss_pred HHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhc---CCCC-------ChH-
Q 017968 93 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR---KVDH-------GTV- 161 (363)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~---~~~~-------~~~- 161 (363)
+++ .+...++++++++....++.+.+.++++.|++.|+++++|+ |+........+.+ |... .+.
T Consensus 139 l~~----~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ 213 (447)
T cd01314 139 LVK----KGISSFKVFMAYKGLLMVDDEELLDVLKRAKELGALVMVHA-ENGDVIAELQKKLLAQGKTGPEYHALSRPPE 213 (447)
T ss_pred HHH----cCCCEEEEEeccCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHHHHHcCCCChHHhhhcCCHH
Confidence 443 22356888888887778899999999999999999999997 5555444333222 3211 011
Q ss_pred -H------HHHHhCCCCCCeeEEEeecCChh-HHHHHHhCCCeE--EEChhhhccc-c--------C-----cc------
Q 017968 162 -T------FLDKIEFLQNNLLSAHTVWVNHT-EIGLLSRAGVKV--SHCPASAMRM-L--------G-----FA------ 211 (363)
Q Consensus 162 -~------~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~g~~v--~~~p~~~~~~-~--------~-----~~------ 211 (363)
+ .+...+.++.+.++.|+++.... +++.+++.|..+ ++||++.... . + .+
T Consensus 214 ~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~~~g~~~~~~pplr~~~ 293 (447)
T cd01314 214 VEAEATARAIRLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDWFEGAKYVCSPPLRPKE 293 (447)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhccccccccceEECCCCCChH
Confidence 0 12334566777777777755444 477778888655 6899884321 0 1 13
Q ss_pred ---cHHHHHHcCCeEEEecCCCCCCCCCcHHH--------------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 017968 212 ---PIKEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLASLINKGREVFANGTTDPAALPAETVLRMA 274 (363)
Q Consensus 212 ---~~~~~l~~G~~~~lgTD~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 274 (363)
++++++++|++++|||||+|++...+++. ++++..++++.. ....++++++++++
T Consensus 294 ~~~~l~~~l~~G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~--------~~~~~~~~~~~~~~ 365 (447)
T cd01314 294 DQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGV--------AKGRITLEKFVELT 365 (447)
T ss_pred HHHHHHHHHhCCCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHH--------HcCCCCHHHHHHHH
Confidence 46799999999999999999864333332 455555555432 12358999999999
Q ss_pred HHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 275 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 275 T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
|.|||+++|+.+++|+|++|++|||||||++..+.+ +.++|+....+.+ +|.+||++|++||++|++++
T Consensus 366 t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g---~v~~t~v~G~~v~~~~~~~~ 442 (447)
T cd01314 366 STNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEKTISADTHHHNVDYNIFEGMKVKG---WPVVTISRGKVVVEDGELVG 442 (447)
T ss_pred hhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcCEEecHHHhhccCCCCcccCeEEee---eEEEEEECCEEEEECCEEec
Confidence 999999999977889999999999999999876543 3456777666654 99999999999999999875
No 27
>PLN02942 dihydropyrimidinase
Probab=99.97 E-value=3.9e-30 Score=246.27 Aligned_cols=310 Identities=17% Similarity=0.205 Sum_probs=197.9
Q ss_pred CCCchhHHHHHHHHHHHHHhCCceEeecCCcC---CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHH
Q 017968 14 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 90 (363)
Q Consensus 14 ~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
..+.||++++++++ +++||||++||... .....++...+...+....+...- +.. . .......+.
T Consensus 73 ~~~~ed~~s~s~aA----l~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~-~----~~~~~~~e~ 140 (486)
T PLN02942 73 TETIDDFFSGQAAA----LAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSCMDYGFHM---AIT-K----WDDTVSRDM 140 (486)
T ss_pred CcccchHHHHHHHH----HcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcCCCEEEEE---Eec-C----CcHhHHHHH
Confidence 45689999999988 99999999998521 212222222222212111111000 000 0 011122344
Q ss_pred HHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHh---hcCCCC-------Ch
Q 017968 91 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD---TRKVDH-------GT 160 (363)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~---~~~~~~-------~~ 160 (363)
.++.+.. +...++++++++.....+.+.+.+++++++++|.++++|+ |+........+ ..|... ++
T Consensus 141 ~~l~~~~---gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~Ha-E~~~~~~~~~~~~~~~G~~~~~~~~~~rP 216 (486)
T PLN02942 141 ETLVKEK---GINSFKFFMAYKGSLMVTDELLLEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRP 216 (486)
T ss_pred HHHHHhC---CCceEEEEEecCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHHHHHcCCCChhhhhccCC
Confidence 4443332 1134777777666566788999999999999999999995 55433332221 112200 11
Q ss_pred -------HHHHH-HhCCCCCCeeEEEeecCCh-hHHHHHHhCCCeEEEChhh-hcc------------c----cCccc--
Q 017968 161 -------VTFLD-KIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPAS-AMR------------M----LGFAP-- 212 (363)
Q Consensus 161 -------~~~~~-~~~~~~~~~~~~H~~~~~~-~~~~~~~~~g~~v~~~p~~-~~~------------~----~~~~~-- 212 (363)
++.+. -.+..+.+.+++|+++.+. ++++.+++.|+.|+++|.. ++. . .-.+|
T Consensus 217 ~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr 296 (486)
T PLN02942 217 PLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIR 296 (486)
T ss_pred chHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCC
Confidence 22222 3466778899999999998 7889999998777766543 111 1 01245
Q ss_pred -------HHHHHHcCCeEEEecCCCCCCCCCcHH-----H---------HHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 017968 213 -------IKEMLHADICVSLGTDGAPSNNRMSIV-----D---------EMYLASLINKGREVFANGTTDPAALPAETVL 271 (363)
Q Consensus 213 -------~~~~l~~G~~~~lgTD~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (363)
+++++++|+++++||||.|++...+++ . +..+..++++.. ....+++++++
T Consensus 297 ~~~~~~~L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~--------~~~~i~~~~~l 368 (486)
T PLN02942 297 PAGHGKALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMV--------ESGQISPTDYV 368 (486)
T ss_pred CHHHHHHHHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHH--------HcCCCCHHHHH
Confidence 479999999999999999986432222 1 222222332211 12348999999
Q ss_pred HHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCc---CChhhhhhcccc--CCCccEEEEccEEEEECCeecc
Q 017968 272 RMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV---HDRITSLVYCMR--TENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 272 ~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~---~~~~~~~~~~~~--~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
+++|.|||+++|+.+++|+|++|++||||++|+++.+.++. .++.....|.+. ..+|..||++|++||++|+++.
T Consensus 369 ~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~~~~py~g~~l~g~v~~tiv~G~~v~~~g~~~~ 448 (486)
T PLN02942 369 RVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVYEGRRGKGKVEVTISQGRVVWENGELKV 448 (486)
T ss_pred HHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCccEEEcHHHccccCCCCCccCcEeeeeEEEEEECCEEEEECCEEec
Confidence 99999999999997678999999999999999998766653 233344444444 4589999999999999998864
Q ss_pred c
Q 017968 347 L 347 (363)
Q Consensus 347 ~ 347 (363)
.
T Consensus 449 ~ 449 (486)
T PLN02942 449 V 449 (486)
T ss_pred c
Confidence 3
No 28
>PRK09230 cytosine deaminase; Provisional
Probab=99.97 E-value=3.2e-30 Score=242.64 Aligned_cols=289 Identities=14% Similarity=0.168 Sum_probs=202.4
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC--C----HHHHHHHHHHc------CCeEEEeccccc
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--H----VSEMAKAVELL------GLRACLVQSTMD 69 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~--~----~~~~~~~~~~~------gir~~~~~~~~~ 69 (363)
+||.. +++.....++++++..++.++.+++++||||+.++... . ++.++++.+.. +++.+...+.++
T Consensus 83 ~~i~~-~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i~a~~~~~~~~ 161 (426)
T PRK09230 83 EGIER-WAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIVAFPQEGILS 161 (426)
T ss_pred HHHHH-HHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEEEeccCccccC
Confidence 45554 35666778999999999999999999999999876521 1 23444444333 333322222222
Q ss_pred CCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccC--CHHHHHHHHHHHHHcCCeeeEeccCChhhH
Q 017968 70 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA--TDRLLLETRDMAREFKTGIHMHVAEIPYEN 147 (363)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~ 147 (363)
. ......+++..+ . ..+. +...++..... +.+.+++++++|+++|+++++|++|...+.
T Consensus 162 ~----------~~~~~~l~~a~~----~---~~~~--vg~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~~ 222 (426)
T PRK09230 162 Y----------PNGEALLEEALR----L---GADV--VGAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQ 222 (426)
T ss_pred C----------ccHHHHHHHHHH----c---CCCE--EeCCCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCCCcc
Confidence 1 011222222211 1 1122 23445543333 578999999999999999999999876554
Q ss_pred HHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecC-------ChhHHHHHHhCCCeEEEChhhhccc----------cCc
Q 017968 148 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVKVSHCPASAMRM----------LGF 210 (363)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-------~~~~~~~~~~~g~~v~~~p~~~~~~----------~~~ 210 (363)
..... .+++.+++.| ++++.++.||+++ ++++++++++.|+.+++||.+|+++ .+.
T Consensus 223 ~~~~~------~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~~~~~p~~~g~ 295 (426)
T PRK09230 223 SRFVE------TVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGI 295 (426)
T ss_pred hHHHH------HHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCCCCCCCCCC
Confidence 32221 2677888888 6889999999999 4678999999999999999999765 466
Q ss_pred ccHHHHHHcCCeEEEecCCCCCC----CCCcHHHHHHHHHHHhcccccccCCCCCCCCC-CHHHHHHHHHHHHHHhccCC
Q 017968 211 APIKEMLHADICVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAAL-PAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 211 ~~~~~~l~~G~~~~lgTD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~T~~pA~~lg~~ 285 (363)
.|+++|+++|+++++|||+.... ...++++.+.......+.. .. ++.++++|+|.|||+++|++
T Consensus 296 ~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~l~maT~~gA~alg~~ 364 (426)
T PRK09230 296 TRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLM-----------GYGQINDGLNLITTHSARTLNLQ 364 (426)
T ss_pred cCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhC-----------ChhhHHHHHHHHhcchhHHhCCC
Confidence 78999999999999999975321 2357777776654333211 01 36899999999999999997
Q ss_pred CCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 286 NDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 286 ~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+ .| |++|++||||++|.+. +...+ . ....+..|+++|++|+..
T Consensus 365 ~-~g-le~G~~ADlv~~~~~~--------~~~~~-~--~~~~~~~v~~~G~~v~~~ 407 (426)
T PRK09230 365 D-YG-IEVGNPANLIILPAEN--------GFDAV-R--RQVPVRYSIRHGKVIAET 407 (426)
T ss_pred C-cC-CCCCCcCCEEEEeCCC--------HHHHH-h--ccCCceEEEECCEEEecc
Confidence 5 68 9999999999999642 22221 1 135789999999999865
No 29
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=99.97 E-value=9.5e-30 Score=243.39 Aligned_cols=307 Identities=16% Similarity=0.181 Sum_probs=197.0
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCceEeecCCcCC----HHHHHHHHHHcCCe-EEEecccccCCCCCCcccccCChHHHH
Q 017968 13 SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLR-ACLVQSTMDCGEGLPASWAVRTTDDCI 87 (363)
Q Consensus 13 ~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~----~~~~~~~~~~~gir-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
...++|+++..++++ +++||||++||+... ....++........ ....+..... .+ . .....+
T Consensus 66 ~~~~~e~~~~~s~~a----~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~-~~~~~~ 133 (454)
T TIGR02033 66 GTVTADDFFTGTKAA----AAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSVIDYGFHMM---IT----H-WNDEVL 133 (454)
T ss_pred CCCCcchHHHHHHHH----HhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCceEEEEEEec---cc----C-CcHHHH
Confidence 356889999998877 789999999986422 22333333222111 1111111100 00 0 111222
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhh---cCCCC------
Q 017968 88 QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT---RKVDH------ 158 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~---~~~~~------ 158 (363)
.+....+. ..+...++++++++.....+.+.+.++++.|+++|+++++|+ |........... .|...
T Consensus 134 ~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-E~~~~~~~~~~~~~~~G~~~~~~~~~ 209 (454)
T TIGR02033 134 EEHIPELV---EEGITSFKVFMAYKNLLMVDDEELFEILKRAKELGALLQVHA-ENGDVIAELQARLLAQGKTGPEYHAL 209 (454)
T ss_pred HHHHHHHH---hcCCcEEEEEeecCCCCCCCHHHHHHHHHHHHhCCCeEEEEc-CCHHHHHHHHHHHHHcCCCChhHhhh
Confidence 23222222 222356888888877777899999999999999999999997 555443322211 12211
Q ss_pred -ChH-------HH-HHHhCCCCCCeeEEEeecCC-hhHHHHHHhCC--CeEEEChhhhc-----------cc-cC--ccc
Q 017968 159 -GTV-------TF-LDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM-----------RM-LG--FAP 212 (363)
Q Consensus 159 -~~~-------~~-~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~g--~~v~~~p~~~~-----------~~-~~--~~~ 212 (363)
.+. +. +...+..+.+.+++|++... -++++.+++.| +++++||.+++ .. .+ .+|
T Consensus 210 ~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~~~~~~~pP 289 (454)
T TIGR02033 210 SRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEGAKYVCSPP 289 (454)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCcccccceeEECCC
Confidence 011 11 22234556666666665532 34677788888 56779998853 11 11 146
Q ss_pred ---------HHHHHHcCCeEEEecCCCCCCCCCc------HH---------HHHHHHHHHhcccccccCCCCCCCCCCHH
Q 017968 213 ---------IKEMLHADICVSLGTDGAPSNNRMS------IV---------DEMYLASLINKGREVFANGTTDPAALPAE 268 (363)
Q Consensus 213 ---------~~~~l~~G~~~~lgTD~~~~~~~~~------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (363)
++++++.|+++++||||.|++...+ .+ .++.+..+++... ....++++
T Consensus 290 lr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v--------~~~~~~~~ 361 (454)
T TIGR02033 290 LREKEDQDALWSALSSGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGV--------ATGRITLE 361 (454)
T ss_pred CCChhhHHHHHHHhhcCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHH--------HcCCCCHH
Confidence 7799999999999999999852111 11 1455555554321 12348999
Q ss_pred HHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 269 TVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 269 ~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
++++|+|.|||+++|+++++|+|++|++|||+++|++..+.+ +.++|+....+. .+|.+||++|++||+
T Consensus 362 ~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~p~~g~~~~---g~v~~t~v~G~~v~~ 438 (454)
T TIGR02033 362 KFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNRTTVISAETHHDNADYNPFEGFKVQ---GAVVSVLSRGRVVVE 438 (454)
T ss_pred HHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCcCeeechHHhhccCCCCcccCeEEe---eeEEEEEECCEEEEE
Confidence 999999999999999976689999999999999999876533 345677666544 389999999999999
Q ss_pred CCeecc
Q 017968 341 NKKILL 346 (363)
Q Consensus 341 ~~~~~~ 346 (363)
+|+++.
T Consensus 439 ~g~~~~ 444 (454)
T TIGR02033 439 DGQFVG 444 (454)
T ss_pred CCEEec
Confidence 998774
No 30
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.97 E-value=3.1e-29 Score=234.11 Aligned_cols=281 Identities=21% Similarity=0.271 Sum_probs=189.0
Q ss_pred cCcCCCCchhHHHHHHHHHHHHHhCCceEeecCC--cCCH---HHHHHH----HHHcCCeEEEecccccCCCCCCccccc
Q 017968 10 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQHV---SEMAKA----VELLGLRACLVQSTMDCGEGLPASWAV 80 (363)
Q Consensus 10 ~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~--~~~~---~~~~~~----~~~~gir~~~~~~~~~~~~~~~~~~~~ 80 (363)
|+...+++||++..++.++.+++++||||+.+.. .... ...+++ ....|++...... +.. .++....
T Consensus 83 ~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~--~~~-~~~~~~~- 158 (377)
T TIGR01224 83 RATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFL--GAH-AVPPEFQ- 158 (377)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeee--ecc-cCCcccc-
Confidence 7778899999999999999999999999984321 1111 123333 3345555543311 111 1221111
Q ss_pred CChHHHHHHH-HHHHHHhcCCCCCCeEE--EeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCC
Q 017968 81 RTTDDCIQSQ-KELYAKHHHAADGRIRI--WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 157 (363)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 157 (363)
...+..+... .++++++... +.+.. .++++. ..+.+.++++++.|++.|+++++|+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~----------- 223 (377)
T TIGR01224 159 GRPDDYVDGICEELIPQVAEE--GLASFADVFCEAG--VFSVEQSRRILQAAQEAGLPVKLHAEELSNL----------- 223 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHh--CCCCeeEEEecCC--CcCHHHHHHHHHHHHHCCCCEEEEecCCCCC-----------
Confidence 1122222222 2234433321 12222 234443 3456789999999999999999999874321
Q ss_pred CChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCC-CCCC
Q 017968 158 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP-SNNR 235 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~-~~~~ 235 (363)
..++.+...+. ..+.|+.++++++++++++.|+.+++||.+++.+ .+..|++++++.|+++++|||+.| .+..
T Consensus 224 -~~~~~~~~~g~----~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~l~~~~~p~~~l~~~Gv~v~lgTD~~~~~~~~ 298 (377)
T TIGR01224 224 -GGAELAAKLGA----VSADHLEHASDAGIKALAEAGTVAVLLPGTTFYLRETYPPARQLIDYGVPVALATDLNPGSSPT 298 (377)
T ss_pred -CHHHHHHHcCC----CccHHHhcCCHHHHHHHHhcCCEEEECchHHHhcCCcCccHHHHHHCCCCEEEECCCCCCCChh
Confidence 13333444443 3467999999999999999999999999999877 678999999999999999999865 3211
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCCh
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDR 315 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~ 315 (363)
.++...+.... ...+++++++++++|.|||+++|+++++|+|++|++||||++|.+.+.
T Consensus 299 ~~~~~~~~~~~--------------~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~------- 357 (377)
T TIGR01224 299 LSMQLIMSLAC--------------RLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILSAPSYA------- 357 (377)
T ss_pred HHHHHHHHHHH--------------HhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChH-------
Confidence 12333322211 112489999999999999999999877899999999999999998542
Q ss_pred hhhhhccccCCCccEEEEccEE
Q 017968 316 ITSLVYCMRTENVVSVMCNGQW 337 (363)
Q Consensus 316 ~~~~~~~~~~~~v~~v~~~G~~ 337 (363)
.+.+.....+|..||++|++
T Consensus 358 --~~~~~~~~~~v~~v~v~G~~ 377 (377)
T TIGR01224 358 --EIPYHYGVNHVHAVIKNGNI 377 (377)
T ss_pred --HhhhhcCCCCceEEEECCCC
Confidence 22233444689999999974
No 31
>PRK09356 imidazolonepropionase; Validated
Probab=99.97 E-value=5.3e-29 Score=234.78 Aligned_cols=286 Identities=21% Similarity=0.250 Sum_probs=192.2
Q ss_pred CcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC--CH---HHHHHHHHHc----CCeEEEecccccCCCCCCcccccC
Q 017968 11 YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HV---SEMAKAVELL----GLRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 11 ~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~--~~---~~~~~~~~~~----gir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
....+++|+++..++.++.+++++||||+.++... .. ...+++.+.. +++.... ... ..++|+... .
T Consensus 109 ~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~~~~~~~~~-~ 184 (406)
T PRK09356 109 ATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVARRLGEEHPVDVVTT--FLG-AHAVPPEYK-G 184 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHHHHhhhCCCceEee--eee-cccCCcccc-C
Confidence 34568999999999999999999999999976422 11 1223333333 3443221 111 112343221 1
Q ss_pred ChHHHHHHH-HHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCCh
Q 017968 82 TTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 160 (363)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 160 (363)
.....++.. .++++.+... +.+......+.....+.+.+.++++.|++.|+++++|+.+.... ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~------------~~ 250 (406)
T PRK09356 185 RPDAYIDLVCEEMLPAVAEE--GLADAVDVFCETGAFSVEQSERVLEAAKALGLPVKIHAEQLSNL------------GG 250 (406)
T ss_pred CHHHHHHHHHHHHhHHHHhc--CCcceEEEEecCCCCCHHHHHHHHHHHHHCCCCEEEEEecccCC------------CH
Confidence 222323332 2234433221 23333222233345678999999999999999999999764321 12
Q ss_pred HHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc--cCcccHHHHHHcCCeEEEecCCCCCCCCCcH
Q 017968 161 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 238 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~--~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~ 238 (363)
.+.....+. ..+.|+.++++++++++++.|+.+++||.++..+ .+..++.++++.|+++++|||+.+. .++
T Consensus 251 ~~~~~~~~~----~~~~H~~~~~~~~~~~la~~g~~~~~~P~~~~~l~~~~~~~~~~l~~~Gi~v~lgtD~~~~---~~~ 323 (406)
T PRK09356 251 AELAAEYGA----LSADHLEYLDEAGIAAMAEAGTVAVLLPGAFYFLRETQYPPARLLRDAGVPVALATDFNPG---SSP 323 (406)
T ss_pred HHHHHHcCC----cEehHhhcCCHHHHHHHHHhCCEEEECccchhhcCcccCchHHHHHHCCCeEEEeCCCCCC---CCh
Confidence 333333333 3578999999999999999999999999998766 4688999999999999999998652 124
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhh
Q 017968 239 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 318 (363)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~ 318 (363)
+..+........ ...+++++++++++|.|||+++|+++++|+|++|+.||||++|.+.+. .
T Consensus 324 ~~~~~~~~~~~~----------~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld~~~~~---------~ 384 (406)
T PRK09356 324 TESLLLAMNMAC----------TLFRLTPEEALAAVTINAARALGRQDTHGSLEVGKKADLVIWDAPSPA---------E 384 (406)
T ss_pred hHHHHHHHHHHh----------hhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEECCCchh---------h
Confidence 444433321110 123589999999999999999999877899999999999999987432 2
Q ss_pred hhccccCCCccEEEEccEEEEE
Q 017968 319 LVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 319 ~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
.+......+|..|+++|++||+
T Consensus 385 ~~~~~~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 385 LPYHFGVNPVETVVKNGEVVVD 406 (406)
T ss_pred hhhhhCCCCccEEEECCEEeeC
Confidence 2222344699999999999984
No 32
>PRK08323 phenylhydantoinase; Validated
Probab=99.96 E-value=1.1e-28 Score=236.28 Aligned_cols=309 Identities=15% Similarity=0.117 Sum_probs=194.9
Q ss_pred cCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC----CHHHHHHHHHHcCCe-EEEecccccCCCCCCcccccCChH
Q 017968 10 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLR-ACLVQSTMDCGEGLPASWAVRTTD 84 (363)
Q Consensus 10 ~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir-~~~~~~~~~~~~~~~~~~~~~~~~ 84 (363)
|+....++++++..++++ +++||||+++|... .....++........ ....+..... .. ....
T Consensus 61 ~~~~~~~~e~~~~~~~~a----~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~-----~~~~ 128 (459)
T PRK08323 61 PFGGTVSSDDFETGTRAA----ACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHMI---IT-----DWNE 128 (459)
T ss_pred ccCCccccCcHHHHHHHH----HhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEEE---ec-----CCcH
Confidence 333345789999888877 78999999998632 222333322222111 1111111000 00 0112
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhc---CCC----
Q 017968 85 DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR---KVD---- 157 (363)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~---~~~---- 157 (363)
..+++..++++. +...++++++++.....+.+.+.++++.|+++|.++++|+ ++........+.+ |..
T Consensus 129 ~~~~~~~~~~~~----g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~~~~~g~~~~~~ 203 (459)
T PRK08323 129 VVLDEMPELVEE----GITSFKLFMAYKGALMLDDDELLRALQRAAELGALPMVHA-ENGDAIAYLQAKLLAEGKTGPEY 203 (459)
T ss_pred HHHHHHHHHHHc----CCCEEEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEc-CChHHHHHHHHHHHHcCCCChhh
Confidence 233444444421 2245787777766677889999999999999999999997 5544433322211 211
Q ss_pred ---CChHH--------HHHHhCCCCCCeeEEEeecCC-hhHHHHHHhCCCe--EEEChh------hhccc-c---C----
Q 017968 158 ---HGTVT--------FLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--VSHCPA------SAMRM-L---G---- 209 (363)
Q Consensus 158 ---~~~~~--------~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~g~~--v~~~p~------~~~~~-~---~---- 209 (363)
..+.. .++..+..+.+.+++|++... -+.++.+++.|+. +++||. +++.. . +
T Consensus 204 ~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k 283 (459)
T PRK08323 204 HALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYV 283 (459)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceE
Confidence 01211 233345566676666665431 2346777888855 569998 44332 1 2
Q ss_pred ----------cccHHHHHHcCCeEEEecCCCCCCCCCcHH---------------HHHHHHHHHhcccccccCCCCCCCC
Q 017968 210 ----------FAPIKEMLHADICVSLGTDGAPSNNRMSIV---------------DEMYLASLINKGREVFANGTTDPAA 264 (363)
Q Consensus 210 ----------~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (363)
..++++++++|+++++||||+|++...+.+ .++++..+++... ....
T Consensus 284 ~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~--------~~~~ 355 (459)
T PRK08323 284 MSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGV--------MTGR 355 (459)
T ss_pred ECCCCCChHHHHHHHHHhhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHH--------HcCC
Confidence 234889999999999999999986322221 3334444443221 1234
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcC--------ChhhhhhccccCCCccEEEEccE
Q 017968 265 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH--------DRITSLVYCMRTENVVSVMCNGQ 336 (363)
Q Consensus 265 ~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~--------~~~~~~~~~~~~~~v~~v~~~G~ 336 (363)
++++++++++|.|||+++|+.+++|+|++|++|||||||++..+.++.+ +|+....+. .+|.+||++|+
T Consensus 356 ~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~s~~~g~~~~---g~v~~viv~G~ 432 (459)
T PRK08323 356 ITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNATKTISASTLHSNVDYNPYEGFEVT---GWPVTTLSRGE 432 (459)
T ss_pred CCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCCcccccCHHHHhhcCCCCcccCcEEe---eeEEEEEECCE
Confidence 8999999999999999999965679999999999999999876655533 455544443 38999999999
Q ss_pred EEEECCeecc
Q 017968 337 WVMKNKKILL 346 (363)
Q Consensus 337 ~v~~~~~~~~ 346 (363)
++++++++++
T Consensus 433 ~v~~~g~~~~ 442 (459)
T PRK08323 433 VVVEDGEFRG 442 (459)
T ss_pred EEEECCEEec
Confidence 9999999864
No 33
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.96 E-value=5.7e-28 Score=225.22 Aligned_cols=281 Identities=22% Similarity=0.300 Sum_probs=188.0
Q ss_pred cCcCCCCchhHHHHHHHHHHHHHhCCceEeecCC--cCC---HHHHHHHHHHcCCe--EEEecccccCCCCCCcccccCC
Q 017968 10 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQH---VSEMAKAVELLGLR--ACLVQSTMDCGEGLPASWAVRT 82 (363)
Q Consensus 10 ~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~--~~~---~~~~~~~~~~~gir--~~~~~~~~~~~~~~~~~~~~~~ 82 (363)
++...++++|++..++.++.+++++||||+.++. ..+ ....+++..+.+.+ ..+..+.++ +..+|+.... +
T Consensus 80 ~~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~-~~~~p~~~~~-~ 157 (371)
T cd01296 80 RATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLG-AHAVPPEYKG-R 157 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeee-cccCCcccCC-h
Confidence 5667889999999999999999999999998842 111 22344555554442 222222221 1112321111 1
Q ss_pred hHHHHH-HHHHHHHHhc-CCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCCh
Q 017968 83 TDDCIQ-SQKELYAKHH-HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 160 (363)
Q Consensus 83 ~~~~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 160 (363)
..... ...++++.+. ......+++ ++.+. ..+.+.++++++.|+++|+++++|+.+.... ..
T Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~------------~~ 221 (371)
T cd01296 158 -EEYIDLVIEEVLPAVAEENLADFCDV-FCEKG--AFSLEQSRRILEAAKEAGLPVKIHADELSNI------------GG 221 (371)
T ss_pred -HHHHHHHHHHHHHHHHHhCCCCEEEE-eecCC--ccCHHHHHHHHHHHHHCCCeEEEEEcCcCCC------------CH
Confidence 11111 1233333322 111233443 22222 3457899999999999999999999875321 12
Q ss_pred HHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCC-CcH
Q 017968 161 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR-MSI 238 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~-~~~ 238 (363)
.+.....+. ..+.|+.++++++++++++.|+.+++||.++..+ .+..++++++++|+++++|||+.|.... .++
T Consensus 222 ~~~~~~~g~----~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~l~~~~~~~~~l~~~Gv~v~lgsD~~p~~~~~~~l 297 (371)
T cd01296 222 AELAAELGA----LSADHLEHTSDEGIAALAEAGTVAVLLPGTAFSLRETYPPARKLIDAGVPVALGTDFNPGSSPTSSM 297 (371)
T ss_pred HHHHHHcCC----CeeHHhcCCCHHHHHHHHHcCCeEEEChHHHHHhCCCCCCHHHHHHCCCcEEEecCCCCCCChHHHH
Confidence 333333343 3478999999999999999999999999998877 5688999999999999999998554211 123
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhh
Q 017968 239 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 318 (363)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~ 318 (363)
...+..+.. ..+++++++++++|.|||+++|+++++|+|++|++||||++|.+.+ ..
T Consensus 298 ~~~~~~~~~--------------~~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~---------~~ 354 (371)
T cd01296 298 PLVMHLACR--------------LMRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILDAPSY---------EH 354 (371)
T ss_pred HHHHHHHHH--------------hcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEECCCch---------Hh
Confidence 344433221 1248999999999999999999987789999999999999998843 22
Q ss_pred hhccccCCCccEEEEcc
Q 017968 319 LVYCMRTENVVSVMCNG 335 (363)
Q Consensus 319 ~~~~~~~~~v~~v~~~G 335 (363)
+++.....+|..||++|
T Consensus 355 ~~~~~~~~~v~~v~~~G 371 (371)
T cd01296 355 LAYRFGVNLVEYVIKNG 371 (371)
T ss_pred hhhhcCCCCceEEEeCc
Confidence 33333445799999998
No 34
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=99.96 E-value=4.3e-27 Score=221.53 Aligned_cols=286 Identities=18% Similarity=0.155 Sum_probs=194.6
Q ss_pred CcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC-------CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCh
Q 017968 11 YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT 83 (363)
Q Consensus 11 ~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-------~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~ 83 (363)
....+++++.+..++.++.+++++||||++++... .++...++.++.+.+.......+ ++.... ..
T Consensus 85 ~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~ 157 (398)
T cd01293 85 RKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAF------PQHGLL-ST 157 (398)
T ss_pred HHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEec------cCcccc-CC
Confidence 34668999999999999999999999999875421 13445555555554433322111 111000 00
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHH
Q 017968 84 DDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTF 163 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 163 (363)
++..++++++...+...+. .+.......++++.++++++.|+++|+++++|+.+...+...... ..++.
T Consensus 158 ----~~~~~~v~~~~~~g~~~~~-~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~------~~~~~ 226 (398)
T cd01293 158 ----PGGEELMREALKMGADVVG-GIPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSRTLE------ELAEE 226 (398)
T ss_pred ----CCHHHHHHHHHHhCCCEEe-CCCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchhHHH------HHHHH
Confidence 1223333333322222222 122222345678999999999999999999999876543221111 14566
Q ss_pred HHHhCCCCCCeeEEEeecCCh-------hHHHHHHhCCCeEEEChhhhccc----------cCcccHHHHHHcCCeEEEe
Q 017968 164 LDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM----------LGFAPIKEMLHADICVSLG 226 (363)
Q Consensus 164 ~~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~g~~v~~~p~~~~~~----------~~~~~~~~~l~~G~~~~lg 226 (363)
+.+.|++ .+..+.|+.+++. +.+++++++|+.+++||.++..+ .+..++.+++++|+++++|
T Consensus 227 ~~~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~~~~~~~~~~~~~~~~~~Gv~v~lG 305 (398)
T cd01293 227 AERRGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTPVKELRAAGVNVALG 305 (398)
T ss_pred HHHhCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhcccccCCCCCCCCCcHHHHHHCCCeEEEC
Confidence 6777876 6788999998863 34899999999999999988553 4678999999999999999
Q ss_pred cCCCC----CCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEE
Q 017968 227 TDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 302 (363)
Q Consensus 227 TD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~ 302 (363)
||+.. +....++++.+..+....+.. ...+.+++++++|.|+|+++|+ +.|+|++|++||||++
T Consensus 306 TD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~aT~~~A~~lg~--~~G~l~~Gk~ADlv~~ 373 (398)
T cd01293 306 SDNVRDPWYPFGSGDMLEVANLAAHIAQLG----------TPEDLALALDLITGNAARALGL--EDYGIKVGCPADLVLL 373 (398)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHcCC----------ChhhHHHHHHhcChhhhhhcCC--cCcccccCCcceEEEE
Confidence 99842 223457888887655433311 1134689999999999999999 4699999999999999
Q ss_pred cCCCCCCCCcCChhhhhhccccCCCccEEEEccEEE
Q 017968 303 DPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 338 (363)
Q Consensus 303 d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v 338 (363)
|.+++ ...... ..++..|+++|+++
T Consensus 374 d~~~~---------~~~~~~--~~~~~~v~~~G~~~ 398 (398)
T cd01293 374 DAEDV---------AEAVAR--QPPRRVVIRKGRVV 398 (398)
T ss_pred CCCCH---------HHHHhc--CCCccEEEECCEEC
Confidence 98732 111111 24899999999864
No 35
>PRK07572 cytosine deaminase; Validated
Probab=99.96 E-value=1.5e-26 Score=218.70 Aligned_cols=288 Identities=15% Similarity=0.146 Sum_probs=193.0
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCceEeecCCc---CC---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHH
Q 017968 13 SNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC 86 (363)
Q Consensus 13 ~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~---~~---~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
..+++++++.+++.++.+++++|||++.++.. .. +....+.....+-+.......+ +........ ..
T Consensus 89 ~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~a~------~~~g~~~~~-~~ 161 (426)
T PRK07572 89 PLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLVAF------PQDGVLRSP-GA 161 (426)
T ss_pred hcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEEec------cChhhccCc-cH
Confidence 34799999999999999999999999998631 11 2222333333333322111111 111010011 11
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEeccCccccCC--HHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHH
Q 017968 87 IQSQKELYAKHHHAADGRIRIWFGIRQIMNAT--DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 164 (363)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
.+..++.++. +.+.+ +..++....++ .+.++.+++.|+++|+++++|+++...+.....+ ...+.+
T Consensus 162 ~~~~~~~l~~----g~d~i--Gg~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~------~~~~~~ 229 (426)
T PRK07572 162 VDNLERALDM----GVDVV--GGIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPLSRHIE------TLAAET 229 (426)
T ss_pred HHHHHHHHHc----CCCEE--eCCCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCCChhHHHHH------HHHHHH
Confidence 2223333321 11222 22244333333 3899999999999999999999887655443322 245566
Q ss_pred HHhCCCCCCeeEEEeecCCh-------hHHHHHHhCCCeEEEChhhhccc----------cCcccHHHHHHcCCeEEEec
Q 017968 165 DKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM----------LGFAPIKEMLHADICVSLGT 227 (363)
Q Consensus 165 ~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~g~~v~~~p~~~~~~----------~~~~~~~~~l~~G~~~~lgT 227 (363)
.+.|+.+ +.++.||.+++. ++++++++.|+.+++||.+++.+ .+..++.++++.|+++++||
T Consensus 230 ~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~~~~~~~~~g~~~v~~l~~~GV~v~lGt 308 (426)
T PRK07572 230 QRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDTYPKRRGMTRVPELMAAGINVAFGH 308 (426)
T ss_pred HHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCCCCCCCCCCCCcCHHHHHHCCCcEEEec
Confidence 7789877 788999988776 45999999999999999988643 36788999999999999999
Q ss_pred CCCC----CCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEc
Q 017968 228 DGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 303 (363)
Q Consensus 228 D~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d 303 (363)
|+.. +..+.++++.++.+....+.. ....+.++++++|.|||+++|+++ .| |++|++||||++|
T Consensus 309 D~~~~~~~~~~~~~~~e~~~~~~~~~~~~----------~~~~l~~~l~~aT~~~A~~lgl~~-~g-i~~G~~ADlvl~d 376 (426)
T PRK07572 309 DCVMDPWYSLGSGDMLEVAHMGLHVAQMT----------GQDAMRACFDAVTVNPARIMGLEG-YG-LEPGCNADLVLLQ 376 (426)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHcCC----------CHHHHHHHHHHhhcchHHhhCCCC-cC-CCCCCcCCEEEEe
Confidence 9842 223567888777654333211 012357788899999999999975 67 9999999999999
Q ss_pred CCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEECCe
Q 017968 304 PFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 343 (363)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~ 343 (363)
.. +|+..+... .++..||++|++|++...
T Consensus 377 ~~--------~p~e~i~~~---~~~~~V~~~G~~v~~~~~ 405 (426)
T PRK07572 377 AR--------DPIEAIRLR---AARLAVIRRGKVIARTPP 405 (426)
T ss_pred CC--------CHHHHHHhc---CCceEEEECCEEEeccCC
Confidence 53 244444222 478999999999987643
No 36
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=99.95 E-value=6.1e-26 Score=211.37 Aligned_cols=275 Identities=14% Similarity=0.112 Sum_probs=185.8
Q ss_pred HHhCCceEeecCCcCC---H---HHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHH-HHHHHHHHHHHhcCCCCC
Q 017968 31 LIHSGVTCFAEAGGQH---V---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDD-CIQSQKELYAKHHHAADG 103 (363)
Q Consensus 31 ~l~~GvTtv~d~~~~~---~---~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 103 (363)
++++||||++|++... . ...+.+.++.|+|.++......... ........... ..++..++++.+.....+
T Consensus 80 ~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 157 (379)
T PRK12394 80 MPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPPGQTW--SGYQENYDPDNIDENKIHALFRQYRNVLQG 157 (379)
T ss_pred HHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeecccccc--cCcccccChhHCCHHHHHHHHHHCcCcEEE
Confidence 6899999999997421 2 2333357788899888766553210 00000001111 135666666665432222
Q ss_pred CeEEEe--ccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeec
Q 017968 104 RIRIWF--GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 181 (363)
Q Consensus 104 ~v~~~~--~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 181 (363)
+++.+ +++. ..+.+.+++.++.|+++|+++++|+.+...+. .+..+++....+..||.+
T Consensus 158 -~ki~~~~~~~~--~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~----------------~~~~~~l~~g~~~~H~~~ 218 (379)
T PRK12394 158 -LKLRVQTEDIA--EYGLKPLTETLRIANDLRCPVAVHSTHPVLPM----------------KELVSLLRRGDIIAHAFH 218 (379)
T ss_pred -EEEEEeccccc--ccchHHHHHHHHHHHHcCCCEEEEeCCCCccH----------------HHHHHhcCCCCEEEecCC
Confidence 23333 3333 56788999999999999999999998754321 223444555567899987
Q ss_pred CC-----------hhHHHHHHhCCCeE-EEChhhhccccCcccHHHHHHcCC-eEEEecCCCCCCCCCcHHHHHHHHHHH
Q 017968 182 VN-----------HTEIGLLSRAGVKV-SHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSNNRMSIVDEMYLASLI 248 (363)
Q Consensus 182 ~~-----------~~~~~~~~~~g~~v-~~~p~~~~~~~~~~~~~~~l~~G~-~~~lgTD~~~~~~~~~~~~~~~~~~~~ 248 (363)
.+ .+++..++++|+.+ ..++.++. +...+++++++|+ ++++|||+.+++...+++..+.. .+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~s~~---~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~~~~~l~~--~~ 293 (379)
T PRK12394 219 GKGSTILTEEGAVLAEVRQARERGVIFDAANGRSHF---DMNVARRAIANGFLPDIISSDLSTITKLAWPVYSLPW--VL 293 (379)
T ss_pred CCCCCcCCCCCCChHHHHHHHhCCeEEEecCCcccc---chHHHHHHHHCCCCceEEECCCCCCCcccCccchHHH--HH
Confidence 43 23566688889876 55554432 3455679999995 99999999987543333322322 22
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCc
Q 017968 249 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENV 328 (363)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v 328 (363)
.+.. ..+++++++++|+|.|||+++|+++++|.|++|++|||+++|.+..+. +..++....++......|
T Consensus 294 ~~~~---------~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G~~ADl~~~~~~~~~~-~~~d~~g~~~~~~~~~~v 363 (379)
T PRK12394 294 SKYL---------ALGMALEDVINACTHTPAVLMGMAAEIGTLAPGAFADIAIFKLKNRHV-EFADIHGETLTGTHVLVP 363 (379)
T ss_pred HHHH---------HcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCccCEEEEecCcCcc-eeccCCCCEEEeeeecce
Confidence 2211 235999999999999999999996567999999999999999988765 567777777776667789
Q ss_pred cEEEEccEEEEEC
Q 017968 329 VSVMCNGQWVMKN 341 (363)
Q Consensus 329 ~~v~~~G~~v~~~ 341 (363)
.+||++|++|+++
T Consensus 364 ~~t~v~G~~v~~~ 376 (379)
T PRK12394 364 QMTIKSGEILYRQ 376 (379)
T ss_pred EEEEECCEEEEec
Confidence 9999999999975
No 37
>PLN02795 allantoinase
Probab=99.94 E-value=2.2e-25 Score=213.61 Aligned_cols=306 Identities=16% Similarity=0.100 Sum_probs=177.0
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCCc-CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 94 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (363)
..|++.+.++++ +.+||||++||.. ..+........+.+++.......++... ... .............++.
T Consensus 115 ~~e~~~~~~~aa----~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~vd~~~--~~~-~~~~~~~~~~~l~~~~ 187 (505)
T PLN02795 115 EWEGFPTGTKAA----AAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGF--WGG-LVPENAHNASVLEELL 187 (505)
T ss_pred chhHHHHHHHHH----HcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCceeeeec--eec-ccCcchhHHHHHHHHH
Confidence 457888888877 8899999999972 2211111111111112111111222110 000 0000111122222222
Q ss_pred HHhcCCCCCCeEEEeccCcc---ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCC--------C-C----
Q 017968 95 AKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV--------D-H---- 158 (363)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~--------~-~---- 158 (363)
..+...++++++++.. +..+.+.+.++++.++++|+++++|+.+............+. . +
T Consensus 188 ----~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~~~~~~~~~~~~~rP~~aE 263 (505)
T PLN02795 188 ----DAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDSRLDADPRSYSTYLKSRPPSWE 263 (505)
T ss_pred ----HCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhhhhhhhcCCcChhHhcccCCHHHH
Confidence 1122226777666543 256788999999999999999999998755211000000000 0 0
Q ss_pred -----ChHHHHHHhCCC----CCCeeEEEeecC-ChhH-HHHHHhCC--CeEEEChhhhc-------------------c
Q 017968 159 -----GTVTFLDKIEFL----QNNLLSAHTVWV-NHTE-IGLLSRAG--VKVSHCPASAM-------------------R 206 (363)
Q Consensus 159 -----~~~~~~~~~~~~----~~~~~~~H~~~~-~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~ 206 (363)
..+...+..++. +.+.++.|.+.. ..-+ +..+++.| +++++||++-. |
T Consensus 264 ~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~~~~~~~~~~~~k~~PPLR 343 (505)
T PLN02795 264 QEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPDGDTRYKCAPPIR 343 (505)
T ss_pred HHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhcccHHHccCCCCceEEcCCCC
Confidence 011122223222 445555554443 2222 44555666 77788996531 1
Q ss_pred c-cCcccHHHHHHcCCeEEEecCCCCCCCCC------cHHHH--------HHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 017968 207 M-LGFAPIKEMLHADICVSLGTDGAPSNNRM------SIVDE--------MYLASLINKGREVFANGTTDPAALPAETVL 271 (363)
Q Consensus 207 ~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (363)
. .+...+++++..|.+++++|||.|++... +++.. ..+..++... ...++++++++
T Consensus 344 ~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~~---------~~~~l~l~~~v 414 (505)
T PLN02795 344 DAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAG---------RAYGLTLEQLA 414 (505)
T ss_pred ChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHHH---------HHcCCCHHHHH
Confidence 1 23567889999999999999999985211 11111 1111122111 13358999999
Q ss_pred HHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC---------Cc-CChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 272 RMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV---------PV-HDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 272 ~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~---------~~-~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+++|.|||+++|+ +++|.|++|++|||||+|++..+.+ .. ++|+.+..+.+ .|.+|+++|++||++
T Consensus 415 ~~~s~~pA~~~gl-~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~~G~~l~g---~v~~tiv~G~~v~~~ 490 (505)
T PLN02795 415 RWWSERPAKLAGL-DSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPYLGTKLSG---KVIATFVRGNLVFLE 490 (505)
T ss_pred HHHHHHHHHHhCC-CCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCCCCeEEEe---EEEEEEECCEEEEEC
Confidence 9999999999999 4679999999999999999864322 22 55666665554 799999999999999
Q ss_pred Ceec
Q 017968 342 KKIL 345 (363)
Q Consensus 342 ~~~~ 345 (363)
|+++
T Consensus 491 g~~~ 494 (505)
T PLN02795 491 GKHA 494 (505)
T ss_pred CeEc
Confidence 9876
No 38
>PRK05985 cytosine deaminase; Provisional
Probab=99.94 E-value=9.4e-25 Score=204.57 Aligned_cols=284 Identities=16% Similarity=0.151 Sum_probs=185.2
Q ss_pred CCCchhHHHHHHHHHHHHHhCCceEeecCCc-------CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHH
Q 017968 14 NMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC 86 (363)
Q Consensus 14 ~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
..++++++.++..++.+++++|+|++++|.. ..++...++.+.. +......++.. |+........ .
T Consensus 90 ~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~----~~~g~~~~~~-~ 162 (391)
T PRK05985 90 AASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETL--RGLIDIQIVAF----PQSGVLSRPG-T 162 (391)
T ss_pred ccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHh--hCcccEEEEec----cCccccCCcC-H
Confidence 4466799999999999999999999987642 2345666664443 32222222221 1111111110 0
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHH
Q 017968 87 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK 166 (363)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (363)
.+.+++..+ .. .+ +...++++....++++.++++++.|+++|+++++|+.+.......... ...+...+
T Consensus 163 ~~ll~~~l~---~g-~~-~~gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d~~~~~~~------~~~e~~~~ 231 (391)
T PRK05985 163 AELLDAALR---AG-AD-VVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELGAFQLE------RIAARTRA 231 (391)
T ss_pred HHHHHHHHH---cC-CC-EEeCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCCccHHHHH------HHHHHHHH
Confidence 011222222 11 22 334456666677888999999999999999999999876532211110 13344445
Q ss_pred hCCCCCCeeEEEeecCC---h----hHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCCeEEEecCCCCCC----CC
Q 017968 167 IEFLQNNLLSAHTVWVN---H----TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSN----NR 235 (363)
Q Consensus 167 ~~~~~~~~~~~H~~~~~---~----~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgTD~~~~~----~~ 235 (363)
.+..+ +..+.|+..+. + +.++++++.|+.+++|+.. ..+..|++++++.|+++++|||+...+ .+
T Consensus 232 ~g~~~-~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~---~~~~~~~~~l~~~Gv~v~lGtD~~~~~~~p~~~ 307 (391)
T PRK05985 232 LGMQG-RVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPG---SVPVPPVAALRAAGVTVFGGNDGIRDTWWPYGN 307 (391)
T ss_pred hCCCC-CEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCC---CCCCCCHHHHHHCCCeEEEecCCCCCCCcCCCC
Confidence 56533 67889988653 3 3478899999999988533 257899999999999999999985311 24
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCCh
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDR 315 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~ 315 (363)
.+++..++.+....... ..-++.++++|+|.|||+++|+++ +.|++|++||||++|.+.+.
T Consensus 308 ~~~~~~~~~~~~~~~~~----------~~~~~~~al~~~T~~~A~~lg~~~--~~l~~G~~ADlvvld~~~~~------- 368 (391)
T PRK05985 308 GDMLERAMLIGYRSGFR----------TDDELAAALDCVTHGGARALGLED--YGLAVGARADFVLVDAETVA------- 368 (391)
T ss_pred CcHHHHHHHHHHHHccC----------ChHHHHHHHHHHcchhHHHhCCcc--cCCCCCCcCCEEEECCCCHH-------
Confidence 57887766544333211 112468999999999999999964 45999999999999987421
Q ss_pred hhhhhccccCCCccEEEEccEEEEECC
Q 017968 316 ITSLVYCMRTENVVSVMCNGQWVMKNK 342 (363)
Q Consensus 316 ~~~~~~~~~~~~v~~v~~~G~~v~~~~ 342 (363)
..+. ....+..|+++|++||++|
T Consensus 369 --~~~~--~~~~~~~v~~~G~~v~~~~ 391 (391)
T PRK05985 369 --EAVV--AVPVRRLVVRGGRIVARDG 391 (391)
T ss_pred --HHHh--hCCcceEEEECCEEEecCC
Confidence 1111 1235677999999999875
No 39
>PRK14085 imidazolonepropionase; Provisional
Probab=99.94 E-value=1.7e-24 Score=201.96 Aligned_cols=260 Identities=16% Similarity=0.223 Sum_probs=174.2
Q ss_pred cCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHH
Q 017968 10 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCI 87 (363)
Q Consensus 10 ~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
+....+++|+++.++..++.+++++||||+.+++.. .++..++..+..| +........ ..+..++... .+.+..+
T Consensus 101 ~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-g~~~~~~~~~-~~~~~~~ 177 (382)
T PRK14085 101 AATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGLTVEDEARSARIAA-EFTDEVTFL-GAHVVPPEYA-GDADEYV 177 (382)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCCCHHHHHHHHHHHH-Hhhhcceee-ccccCCcccC-CCHHHHH
Confidence 334568999999999999999999999999997632 2444444333222 111111111 0111222111 1222222
Q ss_pred HHHH-HHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHH
Q 017968 88 QSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK 166 (363)
Q Consensus 88 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (363)
.... ..+...... ...++++... ...+.+.++++++.|++.|+++.+|+.+.... ..++.+.+
T Consensus 178 ~~~~~~~~~~~~~~-~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~------------~~v~~~~~ 241 (382)
T PRK14085 178 DLVCGPMLDAVAPH-ARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLRVHGNQLGPG------------PGVRLAVE 241 (382)
T ss_pred HHHHHHHHHHHHHh-CCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeEEEeCcccCC------------hHHHHHHH
Confidence 2211 111222221 3456665532 24578999999999999999999999753210 12444555
Q ss_pred hCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHH
Q 017968 167 IEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 245 (363)
Q Consensus 167 ~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~ 245 (363)
.|.. .+.|+.++++++++++++.|+.+++||.+++.. .+..++++++++|+++++|||+.|.. .+...+...
T Consensus 242 ~g~~----~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~~~~~~~~~~~l~~aGv~v~lgsD~~~~~---~~~~~~~~~ 314 (382)
T PRK14085 242 LGAA----SVDHCTYLTDADVDALAGSGTVATLLPGAEFSTRQPYPDARRLLDAGVTVALASDCNPGS---SYTSSMPFC 314 (382)
T ss_pred cCCC----cHHHhCCCCHHHHHHHHHcCCEEEECcHHHHhcCCCCchHHHHHHCCCcEEEEeCCCCCC---ChHHHHHHH
Confidence 5543 478999999999999999999999999998766 67899999999999999999986542 122222221
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCC
Q 017968 246 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 306 (363)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~ 306 (363)
..... ...+++++++++++|.|||+++|++ ++|+|++|++|||+++|.+.
T Consensus 315 ~~~~~----------~~~~l~~~~al~~aT~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~ 364 (382)
T PRK14085 315 VALAV----------RQMGMTPAEAVWAATAGGARALRRD-DVGVLAVGARADLHVLDAPS 364 (382)
T ss_pred HHHHH----------HhcCCCHHHHHHHHHHHHHHHcCCC-CCCCcCCCCCCCEEEEcCCC
Confidence 11110 1235899999999999999999997 47999999999999999874
No 40
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.93 E-value=8.6e-25 Score=193.87 Aligned_cols=227 Identities=19% Similarity=0.226 Sum_probs=172.8
Q ss_pred ccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc---CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccc
Q 017968 3 WLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA 79 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~ 79 (363)
|+.++.||+...+++|++|.+++.++.+++++||||++|+.. ...+...++.++.|+|. ...++. |. .
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~a~~~a~~~~g~r~---~~~~~~----~~-~- 103 (263)
T cd01305 33 PPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGIELLRRALGKLPVPF---EVILGR----PT-E- 103 (263)
T ss_pred CcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHHHHHHHHHHhcCCCc---eEEecc----CC-c-
Confidence 556667788899999999999999999999999999999853 34678889999999995 222221 11 0
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCC
Q 017968 80 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 159 (363)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~ 159 (363)
.... +++. +. ...++++...+++ ++++++.|+++|+++++|+.+...+. + ..
T Consensus 104 ----~~~~---~~~~-~~--------~~~~~~~~~~~~~---l~~~~~~A~~~g~~v~~H~~e~~~~~-------g--~~ 155 (263)
T cd01305 104 ----PDDP---EILL-EV--------ADGLGLSSANDVD---LEDILELLRRRGKLFAIHASETRESV-------G--MT 155 (263)
T ss_pred ----chHH---HHHH-hh--------cccccCCCCCccC---HHHHHHHHHHCCCeeEEecCCCCCCC-------C--ch
Confidence 0111 1111 11 1124555554555 99999999999999999999876421 1 12
Q ss_pred hHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcH
Q 017968 160 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 238 (363)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~ 238 (363)
.++.+.+. +++ .+.|+.++++++++++++.|+.+++||.+|+.+ .+..|+++++++|+++++|||....+ +.++
T Consensus 156 ~i~~~~~~---~~~-~i~H~~~l~~~~~~~la~~g~~v~~~P~sn~~l~~g~~p~~~l~~~Gv~v~lGtD~~~~~-~~~~ 230 (263)
T cd01305 156 DIERALDL---EPD-LLVHGTHLTDEDLELVRENGVPVVLCPRSNLYFGVGIPPVAELLKLGIKVLLGTDNVMVN-EPDM 230 (263)
T ss_pred hHHHHHhC---CCC-EEEEcCCCCHHHHHHHHHcCCcEEEChhhHHHhCCCCCCHHHHHHCCCcEEEECCCCccC-CCCH
Confidence 45555554 334 479999999999999999999999999999887 78999999999999999999986553 4689
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017968 239 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 281 (363)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~ 281 (363)
+++++.+....+.. ..+++.++++|+|.|+||+
T Consensus 231 ~~~~~~~~~~~~~~----------~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 231 WAEMEFLAKYSRLQ----------GYLSPLEILRMATVNAAEF 263 (263)
T ss_pred HHHHHHHHHHhccc----------ccCCHHHHHHHHhhccccC
Confidence 99999877655431 1479999999999999974
No 41
>PRK13404 dihydropyrimidinase; Provisional
Probab=99.93 E-value=2e-25 Score=213.02 Aligned_cols=304 Identities=15% Similarity=0.145 Sum_probs=180.6
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCCcC----CHHHHHHHHH-HcCCeEEEecccccCCCCCCcccccCChHHHHHHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVE-LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 90 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~-~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
..|++.+.++++ +.+||||++++... .....++... ...-..+..++..- +... ...+....+.
T Consensus 73 ~~e~~~~~s~aa----~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~---~~~~----~~~~~~~~~v 141 (477)
T PRK13404 73 MADDFYTGTVSA----AFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFHL---IVAD----PTEEVLTEEL 141 (477)
T ss_pred ccchHHHHHHHH----HcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEEE---EecC----CChhhHHHHH
Confidence 468888888887 89999999998642 2233332222 21111111111110 0000 0111111233
Q ss_pred HHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHH--HHhhcCCC-------CCh-
Q 017968 91 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV--VMDTRKVD-------HGT- 160 (363)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~--~~~~~~~~-------~~~- 160 (363)
.++.+ .+...+|++++... ...+.+.+.++++.|+++|.++.+|+.+...-... .....|.. ..+
T Consensus 142 ~~l~~----~G~~~iKi~~~~~~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~G~~~~~~~~~~rp~ 216 (477)
T PRK13404 142 PALIA----QGYTSFKVFMTYDD-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAAGLTAPKYHAISRPM 216 (477)
T ss_pred HHHHH----cCCCEEEEEecCCC-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHCCCcchhhccccCCH
Confidence 33322 23356787654222 34677889999999999999999999765432100 00111110 000
Q ss_pred -HH------HHHHhCCCCCCeeEEEeecCChh-HHHHHHhCC--CeEEEChhhhcc----------------------c-
Q 017968 161 -VT------FLDKIEFLQNNLLSAHTVWVNHT-EIGLLSRAG--VKVSHCPASAMR----------------------M- 207 (363)
Q Consensus 161 -~~------~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~g--~~v~~~p~~~~~----------------------~- 207 (363)
.+ .+.-....+.+.++.|.+....- .+..+++.| +++++||++... .
T Consensus 217 ~~E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~~g~~~k~~Pplr~~ 296 (477)
T PRK13404 217 LAEREATHRAIALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGMEGAKYICSPPPRDK 296 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccccCCceEECCCCCCh
Confidence 00 11111222444555555433222 244555666 666788866421 1
Q ss_pred cCcccHHHHHHcCCeEEEecCCCCCCCC-----------CcHH--------HHHHHHHHHhcccccccCCCCCCCCCCHH
Q 017968 208 LGFAPIKEMLHADICVSLGTDGAPSNNR-----------MSIV--------DEMYLASLINKGREVFANGTTDPAALPAE 268 (363)
Q Consensus 208 ~~~~~~~~~l~~G~~~~lgTD~~~~~~~-----------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (363)
.+...+++++..|.+++|+|||.|+... .+++ -++.+..+++... ....++++
T Consensus 297 ~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v--------~~~~ls~~ 368 (477)
T PRK13404 297 ANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGV--------VKGRISLN 368 (477)
T ss_pred HHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHH--------HcCCCCHH
Confidence 2246788999999999999999998521 0111 1122333333211 12359999
Q ss_pred HHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 269 TVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 269 ~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
++++++|.||||++|+.+++|+|++|++||||++|++..+.+ +.++|+.+..+.+ +|.+||++|++||+
T Consensus 369 ~~~~~~t~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~~g~~~~g---~v~~tiv~G~vv~~ 445 (477)
T PRK13404 369 RFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPYEGMRVTG---WPVTVLSRGRVVVE 445 (477)
T ss_pred HHHHHHHHHHHHHhCCCCCCceecCCCcCCEEEEcCCccEEEchHHhcccCCCCcccceEEee---eEEEEEECCEEEEE
Confidence 999999999999999965689999999999999999865433 3456776665554 78999999999999
Q ss_pred CCeecc
Q 017968 341 NKKILL 346 (363)
Q Consensus 341 ~~~~~~ 346 (363)
+|+++.
T Consensus 446 ~g~~~~ 451 (477)
T PRK13404 446 DGELVA 451 (477)
T ss_pred CCEEec
Confidence 998874
No 42
>PRK09357 pyrC dihydroorotase; Validated
Probab=99.93 E-value=3.6e-24 Score=202.81 Aligned_cols=293 Identities=20% Similarity=0.170 Sum_probs=183.5
Q ss_pred CCCchhHHHHHHHHHHHHHhCCceEeecCCcC--------CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHH
Q 017968 14 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDD 85 (363)
Q Consensus 14 ~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (363)
..+.|+++..++++ +++||||+++|... ..+..++.+++.+++.+...+.++.+ .. ..
T Consensus 67 ~~~~e~~~~~~~~a----~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~ 132 (423)
T PRK09357 67 QEDKETIETGSRAA----AAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAITKG--LA--------GE 132 (423)
T ss_pred ccccccHHHHHHHH----HhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEEeC--CC--------Cc
Confidence 45789999999988 89999999998732 23455666777777766665554321 11 11
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHH------hhcCCCCC
Q 017968 86 CIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM------DTRKVDHG 159 (363)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~------~~~~~~~~ 159 (363)
.+.+..++.+ .+ +. .+.++.....+.+.+.++++.|+++|.++++|+.+......... ..++....
T Consensus 133 ~~~~~~~l~~------~g-v~-~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~~~~~g~~~~~~~~~~~ 204 (423)
T PRK09357 133 ELTEFGALKE------AG-VV-AFSDDGIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEGGVMNEGEVSARLGLPGI 204 (423)
T ss_pred cHHHHHHHHh------CC-cE-EEECCCcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhcccccCChhhHHhCCCCC
Confidence 1223333322 12 22 34556556678899999999999999999999988654321110 01111111
Q ss_pred -hHH-------HHHHhCCCCCCeeEEEeecCChhH-HHHHHhCC--CeEEEChhhhc-------------------cc-c
Q 017968 160 -TVT-------FLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVSHCPASAM-------------------RM-L 208 (363)
Q Consensus 160 -~~~-------~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~~-~ 208 (363)
... .+.-....+.+.++.|.......+ ++..++.| +++++||++-. |. .
T Consensus 205 p~~~E~~~i~~~~~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~~~~~~k~~Pplr~~~ 284 (423)
T PRK09357 205 PAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLTYDPNYKVNPPLRTEE 284 (423)
T ss_pred CHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhCcCCceEECCCCCCHH
Confidence 111 111111223345555554444333 44455555 55669995421 11 2
Q ss_pred CcccHHHHHHcCCeEEEecCCCCCCCCC---cHH--------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHH
Q 017968 209 GFAPIKEMLHADICVSLGTDGAPSNNRM---SIV--------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 277 (363)
Q Consensus 209 ~~~~~~~~l~~G~~~~lgTD~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~ 277 (363)
+..++++++++|+++++||||+|++... +++ .+..+..++... .....++++++++++|.|
T Consensus 285 ~~~~l~~~l~~G~~~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~--------~~~~~~~~~~~~~~~t~~ 356 (423)
T PRK09357 285 DREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTL--------VKTGLLDLEQLLEKMTIN 356 (423)
T ss_pred HHHHHHHHHHcCCCeEEecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHH--------HHcCCCCHHHHHHHHhHH
Confidence 4678899999999999999999875321 111 111222222211 123359999999999999
Q ss_pred HHHhccCCCCccccCCCCcccEEEEcCCCCCCCC--------cCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 278 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP--------VHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 278 pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
||+++|++ . |+|++|++|||+++|++..+.++ .++|+.+..+. ..|..||++|++||++
T Consensus 357 ~A~~~g~~-~-G~i~~G~~AD~~i~d~~~~~~v~~~~~~~~~~~~p~~g~~~~---g~v~~t~v~G~~v~~~ 423 (423)
T PRK09357 357 PARILGLP-A-GPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPFIGMKLK---GKVVYTIVDGKIVYQD 423 (423)
T ss_pred HHHHhCCC-C-CccCCCCcCCEEEEcCCCCEEEchhhcccCCCCCCCcCCEEe---eEEEEEEECCEEEecC
Confidence 99999996 4 99999999999999988754333 23455555444 3799999999999974
No 43
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.93 E-value=2.5e-24 Score=198.56 Aligned_cols=251 Identities=19% Similarity=0.158 Sum_probs=168.9
Q ss_pred chhHHHHHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHH----cCCeEEEecccccCCCCCCc-------------ccc
Q 017968 17 EEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL----LGLRACLVQSTMDCGEGLPA-------------SWA 79 (363)
Q Consensus 17 ~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~----~gir~~~~~~~~~~~~~~~~-------------~~~ 79 (363)
++.....+...+.+++++|||||+|++...... .+...+ .|.|.+.....+....+... ...
T Consensus 37 ~~~~~~~~~~~~~~~l~~GvTtv~d~g~~~~~~-~~~~~~~g~~~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (342)
T cd01299 37 VEYRTIRATRQARAALRAGFTTVRDAGGADYGL-LRDAIDAGLIPGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAV 115 (342)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeCCCcchHH-HHHHHHcCCccCCceeecchhhcccCCCCccccccccccccCCcce
Confidence 333334556778888999999999998543322 333333 34455443322221111111 111
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCc--------cccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHH
Q 017968 80 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ--------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 151 (363)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~ 151 (363)
..+.+ +.+..+++....+.+.+|+++.... ....+.+.+.++++.|++.|+++++|+.+..
T Consensus 116 ~~~~~----~~~~~v~~~~~~G~~~iK~~~~g~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~------- 184 (342)
T cd01299 116 VDGVE----EVRAAVREQLRRGADQIKIMATGGVLSPGDPPPDTQFSEEELRAIVDEAHKAGLYVAAHAYGAE------- 184 (342)
T ss_pred ecCHH----HHHHHHHHHHHhCCCEEEEeccCCcCCCCCCCcccCcCHHHHHHHHHHHHHcCCEEEEEeCCHH-------
Confidence 12233 3333344443445678998874321 1246789999999999999999999997532
Q ss_pred hhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhcc---------------------c-cC
Q 017968 152 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR---------------------M-LG 209 (363)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~---------------------~-~~ 209 (363)
.+....+.|. ..+.|+..+++++++++++.|+.++.||.++.. . ..
T Consensus 185 --------~i~~~l~~G~----~~i~H~~~~~~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T cd01299 185 --------AIRRAIRAGV----DTIEHGFLIDDETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAEKVALVLEAG 252 (342)
T ss_pred --------HHHHHHHcCC----CEEeecCCCCHHHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHHHHHHHHHHH
Confidence 2222233333 368999999999999999999999999986532 1 23
Q ss_pred cccHHHHHHcCCeEEEecCCCC-CCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCc
Q 017968 210 FAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 288 (363)
Q Consensus 210 ~~~~~~~l~~G~~~~lgTD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~ 288 (363)
..+++.++++|+++++|||... ...+..++.++.... + .++++.++++++|.|||+++|+++++
T Consensus 253 ~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~~~e~~~~~---~------------~~~~~~~al~~~T~~~a~~~g~~~~~ 317 (342)
T cd01299 253 RDALRRAHKAGVKIAFGTDAGFPVPPHGWNARELELLV---K------------AGGTPAEALRAATANAAELLGLSDEL 317 (342)
T ss_pred HHHHHHHHHcCCeEEEecCCCCCCCchhHHHHHHHHHH---H------------hCCCHHHHHHHHHHHHHHHhCccCCc
Confidence 4678899999999999999864 112234555554321 1 24789999999999999999998778
Q ss_pred cccCCCCcccEEEEcCCC
Q 017968 289 GSLEAGKKADMVVVDPFS 306 (363)
Q Consensus 289 G~i~~G~~ADlvv~d~~~ 306 (363)
|+|++|+.|||||+|.++
T Consensus 318 G~i~~G~~ADlvvl~~~p 335 (342)
T cd01299 318 GVIEAGKLADLLVVDGDP 335 (342)
T ss_pred ceECCCCcCCEEEECCCh
Confidence 999999999999999873
No 44
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=99.93 E-value=1.6e-25 Score=212.84 Aligned_cols=231 Identities=16% Similarity=0.148 Sum_probs=142.1
Q ss_pred CCeEEEeccCcc---ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHH---HhhcCC-------CCCh-------H-
Q 017968 103 GRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV---MDTRKV-------DHGT-------V- 161 (363)
Q Consensus 103 ~~v~~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~---~~~~~~-------~~~~-------~- 161 (363)
..++++++++.. ...+.+.+.++++.+++.|+++++|+.... ..... ....|. ...+ +
T Consensus 141 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~-~~~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~ 219 (443)
T TIGR03178 141 VGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQLLLVHAENPA-ITSALGEEAPPQGGVGADAYLASRPVFAEVEAIR 219 (443)
T ss_pred cEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEeccChH-HHHHHHHHHHhcCCCChhHhcCcCCHHHHHHHHH
Confidence 356776655332 356788999999999999999999975433 22211 000010 0000 0
Q ss_pred HHHHHhCCCCCCeeEEEeecCCh-hHHHHHHhCC--CeEEEChhhhc-------------------cc-cCcccHHHHHH
Q 017968 162 TFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAG--VKVSHCPASAM-------------------RM-LGFAPIKEMLH 218 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~g--~~v~~~p~~~~-------------------~~-~~~~~~~~~l~ 218 (363)
..++-....+.+.++.|...... +.++.+++.| +++++||++.. +. .+...++++++
T Consensus 220 ~~~~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~ 299 (443)
T TIGR03178 220 RTLALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALL 299 (443)
T ss_pred HHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhCcCcceEEcCCCCChHHHHHHHHHHH
Confidence 01111112233344444333221 2244555566 44556886631 11 22356778899
Q ss_pred cCCeEEEecCCCCCCC----CCcHHHHH--------HHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCC
Q 017968 219 ADICVSLGTDGAPSNN----RMSIVDEM--------YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 286 (363)
Q Consensus 219 ~G~~~~lgTD~~~~~~----~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~ 286 (363)
.|.+++++|||+|+.. ..+++... .+..++... ....+++++++++++|.|||+++|++
T Consensus 300 ~G~i~~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~--------~~~~~l~~~~~~~~~t~~pA~~~g~~- 370 (443)
T TIGR03178 300 NGLIDCVVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEA--------VQKRGLPLEDIARLMATNPAKRFGLA- 370 (443)
T ss_pred cCCccEEeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHH--------HHhcCCCHHHHHHHHhHHHHHHcCCC-
Confidence 9999999999998742 11222111 111111111 11345899999999999999999994
Q ss_pred CccccCCCCcccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 287 DIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 287 ~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
++|.|++|++|||||+|++..+.+ ..++|+....+.+ +|.+||++|++||++|++++
T Consensus 371 ~~G~l~~G~~Ad~vi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g---~v~~t~v~G~~v~~~g~~~~ 435 (443)
T TIGR03178 371 QKGRIAPGKDADFVFVDPDESYTLTPDDLYYRHKVSPYVGRTIGG---RVRATYLRGQCIYDDEQFIG 435 (443)
T ss_pred CCCccCCCCcCCEEEEcCCCcEEEcHHHhhhcCCCCCcCCcEEee---EEEEEEECCEEEEECCeecc
Confidence 579999999999999999754322 2356666665553 89999999999999999764
No 45
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.92 E-value=2e-22 Score=191.09 Aligned_cols=281 Identities=17% Similarity=0.173 Sum_probs=181.0
Q ss_pred CCchhHHHHHHHHHHHHHhCCceEe---ecC-Cc---CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHH
Q 017968 15 MTEEDSYISTLLCGIELIHSGVTCF---AEA-GG---QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCI 87 (363)
Q Consensus 15 ~~~ed~~~~~~~~~~~~l~~GvTtv---~d~-~~---~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
.+.+|++.+...++..++..|+|++ +|. .. ..++.+.+..+...-+.-.....+ . |.........
T Consensus 115 ~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~-~----p~~~~~~~~~--- 186 (438)
T PRK07583 115 WSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELREAWAGRIALQAVSL-V----PLDAYLTDAG--- 186 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHHHHhhccCeEEEEEe-c----ChhhccCchH---
Confidence 3568888888889999999999954 452 21 223344444444433321111111 1 1100000111
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHh
Q 017968 88 QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKI 167 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (363)
.+..+.+.+. .+.+... +... ..+.+.+.++++.|+++|+++++|+.+.......... ...+.+.+.
T Consensus 187 ~eL~~~v~~~----~gv~g~~--~~~~-~~~d~~l~~i~~lA~~~G~~v~vH~~E~~~~~~~~l~------~~~~~~~~~ 253 (438)
T PRK07583 187 ERLADLVAEA----GGLLGGV--TYMN-PDLDAQLDRLFRLARERGLDLDLHVDETGDPASRTLK------AVAEAALRN 253 (438)
T ss_pred HHHHHHHHHc----CCEEeCC--CCCC-CCHHHHHHHHHHHHHHhCCCcEEeECCCCCchHHHHH------HHHHHHHHh
Confidence 2222222221 1222211 1111 1256789999999999999999999876543322111 123444556
Q ss_pred CCCCCCeeEEEeecCC-------hhHHHHHHhCCCeEEEChhhhccc-----------cCcccHHHHHHcCCeEEEecCC
Q 017968 168 EFLQNNLLSAHTVWVN-------HTEIGLLSRAGVKVSHCPASAMRM-----------LGFAPIKEMLHADICVSLGTDG 229 (363)
Q Consensus 168 ~~~~~~~~~~H~~~~~-------~~~~~~~~~~g~~v~~~p~~~~~~-----------~~~~~~~~~l~~G~~~~lgTD~ 229 (363)
+..+ +.+++|+.+++ .+.++++++.|+.+++||.+++.+ .+..++.++++.|+++++|||+
T Consensus 254 G~~~-~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P~~~~~l~~~~~~~~p~~~~~~~v~~l~~aGV~valGtD~ 332 (438)
T PRK07583 254 GFEG-KVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLPMCNLYLQDRQPGRTPRWRGVTLVHELKAAGIPVAVASDN 332 (438)
T ss_pred CCCC-CEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCcCCCCCCCCcchHHHHHHCCCeEEEEeCC
Confidence 6644 58899999877 356899999999999999987643 2457899999999999999998
Q ss_pred CCC---C-CCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCC
Q 017968 230 APS---N-NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 305 (363)
Q Consensus 230 ~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~ 305 (363)
.+. + ...++++.+..+....+ .+.++.++++++|.|||+++|+++ +|+|++|+.||||++|.+
T Consensus 333 ~~d~~~p~g~~~~~~~~~~a~~~~~------------~~~~~~~al~~~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~ 399 (438)
T PRK07583 333 CRDPFYAYGDHDMLEVFREAVRILH------------LDHPYDDWPAAVTTTPADIMGLPD-LGRIAVGAPADLVLFKAR 399 (438)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHh------------cCCcHHHHHHHHhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCC
Confidence 531 1 23567776665543221 136789999999999999999975 799999999999999987
Q ss_pred CCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 306 SWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
. +..++. ....+..||++|++|.+.
T Consensus 400 ~---------~~~~~~--~~~~~~~V~~~G~~v~~~ 424 (438)
T PRK07583 400 S---------FSELLS--RPQSDRIVLRAGKPIDTT 424 (438)
T ss_pred C---------HHHHHh--cCCCccEEEECCEEeccc
Confidence 3 222222 124677899999988755
No 46
>PRK07575 dihydroorotase; Provisional
Probab=99.92 E-value=2e-23 Score=197.65 Aligned_cols=195 Identities=15% Similarity=0.211 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHcCCeeeE-eccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEE
Q 017968 120 RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 198 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~ 198 (363)
+.+.+++++|++.|.++|+ |++ +....+..... +. ..+... +..|..+++.+++. +.+....
T Consensus 212 ~av~~~~~la~~~g~~lhi~HiS-t~~~v~~i~~~-----------k~-~~vt~e-v~phhL~l~~~~~~---~~~~~~k 274 (438)
T PRK07575 212 LATRLALKLSKKYQRRLHILHLS-TAIEAELLRQD-----------KP-SWVTAE-VTPQHLLLNTDAYE---RIGTLAQ 274 (438)
T ss_pred HHHHHHHHHHHHHCCCEEEEECC-CHHHHHHHHHh-----------cC-CCEEEE-EchhhheeCHHHHh---CCCceEE
Confidence 3455666666777777766 666 33322221111 00 111111 22333556665543 2355555
Q ss_pred EChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCC----------CCcH-HHHHHHHHHHhcccccccCCCCCCCCCC
Q 017968 199 HCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN----------RMSI-VDEMYLASLINKGREVFANGTTDPAALP 266 (363)
Q Consensus 199 ~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (363)
++|. +|. .+..++++++++|++++|+|||.|++. ...+ ..+..+..+++.. ....++
T Consensus 275 ~~PP--LR~~~d~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~---------~~~~ls 343 (438)
T PRK07575 275 MNPP--LRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAA---------MRGKCT 343 (438)
T ss_pred EeCC--CCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHH---------hcCCCC
Confidence 5664 555 678899999999999999999999852 0112 3334444444432 123599
Q ss_pred HHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCc--------CChhhhhhccccCCCccEEEEccEEE
Q 017968 267 AETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYCMRTENVVSVMCNGQWV 338 (363)
Q Consensus 267 ~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v~~v~~~G~~v 338 (363)
++++++++|.||||++|++ ++|+|++|++|||||+|++..+.++. ++|+.+..+.+ .+..||++|++|
T Consensus 344 l~~~~~~~s~npAk~lgl~-~~G~L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~~~G---~v~~tiv~G~~v 419 (438)
T PRK07575 344 VAQVVRWMSTAVARAYGIP-NKGRIAPGYDADLVLVDLNTYRPVRREELLTKCGWSPFEGWNLTG---WPVTTIVGGQIV 419 (438)
T ss_pred HHHHHHHHhhhHHHHcCCC-CCCccCCCCcCCEEEEcCCCCEEEchHHccccCCCCCCCCCEEee---EEEEEEECCEEE
Confidence 9999999999999999994 46999999999999999987654432 36777676664 789999999999
Q ss_pred EECCeecc
Q 017968 339 MKNKKILL 346 (363)
Q Consensus 339 ~~~~~~~~ 346 (363)
|++|+++.
T Consensus 420 ~~~g~~~~ 427 (438)
T PRK07575 420 FDRGQVNT 427 (438)
T ss_pred EECCEEcc
Confidence 99998763
No 47
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=99.92 E-value=7.5e-23 Score=193.55 Aligned_cols=207 Identities=22% Similarity=0.184 Sum_probs=159.0
Q ss_pred cccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhC
Q 017968 114 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 193 (363)
Q Consensus 114 ~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 193 (363)
....+++.+.++++.|.+.|+++.+|+..+..- +..++. ......+.+..+.+..+.|..++++++++++++.
T Consensus 315 ~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av-~~~Lda------fE~~~~~~~~~~~r~rieH~~~v~~~~i~R~~~L 387 (535)
T COG1574 315 ELLLTEEELEELVRAADERGLPVAVHAIGDGAV-DAALDA------FEKARKKNGLKGLRHRIEHAELVSPDQIERFAKL 387 (535)
T ss_pred CcccCHHHHHHHHHHHHHCCCcEEEEEechHHH-HHHHHH------HHHHhhhcCCccCCceeeeeeecCHhHHHHHHhc
Confidence 345688999999999999999999999876642 322221 2233344455667788999999999999999999
Q ss_pred CCeEEEChhhhc-------------cccCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCC
Q 017968 194 GVKVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 260 (363)
Q Consensus 194 g~~v~~~p~~~~-------------~~~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (363)
|+..+++|.... +.....|++.|++.|+.++.|||.+.. ..|+|..+..+...+....... .
T Consensus 388 gv~~svQP~f~~~~~~~~~~rlG~~r~~~~~p~~~ll~~G~~la~gSD~Pv~--~~dP~~~i~~AVtr~~~~g~~~---~ 462 (535)
T COG1574 388 GVIASVQPNFLFSDGEWYVDRLGEERASRSYPFRSLLKAGVPLAGGSDAPVE--PYDPWLGIYAAVTRKTPGGRVL---G 462 (535)
T ss_pred CceEeeccccccccchHHHHhhhhhhhhccCcHHHHHHCCCeEeccCCCCCC--CCChHHHHHHHHcCCCCCCCCC---c
Confidence 999999986642 123467999999999999999999764 3678988887754332221000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 261 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 261 ~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
....++++++|++.|.|+|++.|.++++|+|++||.|||+|+|.+.+...|.. ....+|+.|+++|++||+
T Consensus 463 ~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~---------i~~~~v~~T~~~Gk~VY~ 533 (535)
T COG1574 463 PEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDS---------IKDTKVVLTIVAGKVVYR 533 (535)
T ss_pred cccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHH---------hccceEEEEEEcCeEeec
Confidence 01159999999999999999999988999999999999999999865543322 233589999999999997
Q ss_pred C
Q 017968 341 N 341 (363)
Q Consensus 341 ~ 341 (363)
.
T Consensus 534 ~ 534 (535)
T COG1574 534 A 534 (535)
T ss_pred C
Confidence 5
No 48
>PRK08417 dihydroorotase; Provisional
Probab=99.92 E-value=5.3e-24 Score=198.36 Aligned_cols=217 Identities=13% Similarity=0.121 Sum_probs=135.2
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHh------hcCCCCCh-----HH---HHHHhCCCCCCeeEEEeec
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD------TRKVDHGT-----VT---FLDKIEFLQNNLLSAHTVW 181 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~------~~~~~~~~-----~~---~~~~~~~~~~~~~~~H~~~ 181 (363)
..+.+.+.++++.+++.|+++.+|+.+.......... ..+....+ .. .+.-....+.+. |.+|
T Consensus 126 ~~~~~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~~~~l---hi~h 202 (386)
T PRK08417 126 DLDANLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFELGLPGIPSIAETKEVAKMKELAKFYKNKV---LFDT 202 (386)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCCE---EEEe
Confidence 4577889999999999999999999775432111110 00000000 01 111112223344 5555
Q ss_pred CChhH----HHHHHhCC--CeEEEChhhhcc-------------------c-cCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 182 VNHTE----IGLLSRAG--VKVSHCPASAMR-------------------M-LGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 182 ~~~~~----~~~~~~~g--~~v~~~p~~~~~-------------------~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
+|..+ ++..++.| +++++||++-.. . .+...+++.+.+|.+++|+|||.|++..
T Consensus 203 vS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~ 282 (386)
T PRK08417 203 LALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNS 282 (386)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHH
Confidence 55432 33345555 777899977421 1 2345688899999999999999998421
Q ss_pred C---cHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCC-
Q 017968 236 M---SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP- 311 (363)
Q Consensus 236 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~- 311 (363)
. +++........++.....+.........++++++++++|.|||+++|++ + |+|++|++|||+++|++..+..+
T Consensus 283 ~K~~~~~~a~~G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~~t~~pA~~lgl~-~-G~l~~G~~ADlvi~d~~~~~~~~~ 360 (386)
T PRK08417 283 KKDLAFDEAAFGIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQFLGLN-S-GEIEVGKEADLVLFDPNESTIIDD 360 (386)
T ss_pred HccCCHhHCCCCchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCC-C-CccCCCCcCCEEEEcCCCCeEeCC
Confidence 1 1221111101111110000000112335899999999999999999995 4 99999999999999998766655
Q ss_pred cCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 312 VHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 312 ~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
.++|+.+..+.+ +|..||++|+++|+
T Consensus 361 ~~~p~~g~~~~g---~v~~tiv~G~~v~~ 386 (386)
T PRK08417 361 NFSLYSGDELYG---KIEAVIIKGKLYLE 386 (386)
T ss_pred CCCCccCCEEec---cEEEEEECCEEEeC
Confidence 357777666654 79999999999974
No 49
>PRK06189 allantoinase; Provisional
Probab=99.92 E-value=1.1e-23 Score=200.49 Aligned_cols=300 Identities=16% Similarity=0.136 Sum_probs=173.1
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCC-c-----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAG-G-----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 89 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~-~-----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (363)
..+++...++++ +++||||+++|. . ...+......+...-..+.-+..... .. .....+
T Consensus 70 ~~~~~~~~~~aa----~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~--------~~~~~~ 134 (451)
T PRK06189 70 HWEGFATGSAAL----AAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGG---LV--------PGNLEH 134 (451)
T ss_pred CcccHHHHHHHH----HhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEEec---cc--------ccCHHH
Confidence 467888888777 999999999985 1 12233333322222221111111100 00 001223
Q ss_pred HHHHHHHhcCCCCCCeEEEeccC---ccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHH--HhhcC-------CC
Q 017968 90 QKELYAKHHHAADGRIRIWFGIR---QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV--MDTRK-------VD 157 (363)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~--~~~~~-------~~ 157 (363)
...+.+. +.-.+++++..+ .....+...+.++++.+++.|.++.+|+.+........ ....+ ..
T Consensus 135 l~~l~~~----Gv~~~k~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~ 210 (451)
T PRK06189 135 LRELAEA----GVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQGKTDVRDYLE 210 (451)
T ss_pred HHHHHHc----CCcEEEEEccccCCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcCCCChhHccc
Confidence 3333221 111234443221 12245677888999999999999999997654211110 00111 00
Q ss_pred CCh-----HH---HHHHhCCCCCCeeEEEeecCChhH-HHHHHhCC--CeEEEChhhhc-------------------cc
Q 017968 158 HGT-----VT---FLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVSHCPASAM-------------------RM 207 (363)
Q Consensus 158 ~~~-----~~---~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~~ 207 (363)
..+ .. .+.-....+.+.++.|.+....-+ +...++.| +++++||++.. |.
T Consensus 211 ~~P~~~E~~~v~~~l~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~~~~~~~~~Pplr~ 290 (451)
T PRK06189 211 SRPVVAELEAVQRALLYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIGAVAKCAPPLRS 290 (451)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhCcCCceEEeCCCCC
Confidence 000 00 111111223344444443322222 34445555 77778986631 11
Q ss_pred -cCcccHHHHHHcCCeEEEecCCCCCCCC----CcHHHH--------HHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 017968 208 -LGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDE--------MYLASLINKGREVFANGTTDPAALPAETVLRMA 274 (363)
Q Consensus 208 -~~~~~~~~~l~~G~~~~lgTD~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 274 (363)
.+..++++++++|++++|+|||.|++.. .+++.. ..+..++... .....++++++++++
T Consensus 291 ~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~--------~~~~~l~~~~~~~~~ 362 (451)
T PRK06189 291 RSQKEELWRGLLAGEIDMISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTEG--------YIERGIPLETIARLL 362 (451)
T ss_pred hhhHHHHHHHHhCCCceEEECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHHH--------HhcCCCCHHHHHHHH
Confidence 2346788899999999999999998531 223322 2222222221 123459999999999
Q ss_pred HHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 275 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 275 T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
|.|||++||++ ++|+|++|++|||+|+|++..+.+ ..++|+.+..+.+ .|.+||++|++++++|+++.
T Consensus 363 t~npA~~lgl~-~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g---~v~~tiv~G~~v~~~g~~~~ 438 (451)
T PRK06189 363 ATNPAKRFGLP-QKGRLEVGADADFVLVDLDETYTLTKEDLFYRHKQSPYEGRTFPG---RVVATYLRGQCVYQDGEVFP 438 (451)
T ss_pred hhhHHHHhCCC-CCCcccCCCcCCEEEEcCCCCEEECHHHhhhcCCCCCcCCcEEEe---EEEEEEECCEEEEECCEEcc
Confidence 99999999994 579999999999999999754322 2356776665554 89999999999999999764
No 50
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=99.92 E-value=1.3e-23 Score=195.33 Aligned_cols=296 Identities=17% Similarity=0.175 Sum_probs=179.9
Q ss_pred CcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcCC-----HH---HHHHHHHHcCCeEEEecccccCCCCCCcccccCC
Q 017968 11 YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VS---EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRT 82 (363)
Q Consensus 11 ~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~---~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~ 82 (363)
....-..|++.++++++ +++|||||++|.... .+ ...+.+++...--+..++..+.. .
T Consensus 64 epg~~~ke~~~tgs~AA----a~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~it~~----------~ 129 (430)
T COG0044 64 EPGFEHKETFETGSRAA----AAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGGLTKG----------N 129 (430)
T ss_pred CCCcchhhhHHHHHHHH----HcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEEEecc----------c
Confidence 34445667899999999 999999999997533 22 22333333333323333322211 0
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcC-------
Q 017968 83 TDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK------- 155 (363)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~------- 155 (363)
. ...++.+... ..+ ++.+..... ...+.+.+++..+++++.|.++.+|+.+......... ..|
T Consensus 130 ~-----~~~~~~~~~~--~~g-~~~F~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~-~~g~~~~~~~ 199 (430)
T COG0044 130 L-----GKLELTERGV--EAG-FKGFMDDST-GALDDDVLEEALEYAAELGALILVHAEDDDLIAEGVM-NEGLRAPELG 199 (430)
T ss_pred c-----chhhhhhhhh--ccc-eEEEecCCc-CcCCHHHHHHHHHHHHhcCCeEEEecCChhHhhhHHH-hcCccchhhc
Confidence 0 1011111111 112 344443332 4567889999999999999999999977642111111 111
Q ss_pred CCCChH-------H-HHHHhCCCCCCeeEEEeecCChhH-HHH---HHhCC--CeEEEChhhh-----------------
Q 017968 156 VDHGTV-------T-FLDKIEFLQNNLLSAHTVWVNHTE-IGL---LSRAG--VKVSHCPASA----------------- 204 (363)
Q Consensus 156 ~~~~~~-------~-~~~~~~~~~~~~~~~H~~~~~~~~-~~~---~~~~g--~~v~~~p~~~----------------- 204 (363)
....+. + .++-....+.+ .|.+|+|..+ ++. .+..| +++++||++-
T Consensus 200 ~~~~p~~aE~~~iar~~~la~~~g~~---vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~~~~~~k~n 276 (430)
T COG0044 200 LAGRPPIAEASAIARDLELARATGAR---VHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIEDLGTLAKVN 276 (430)
T ss_pred cCCCChHHHHHHHHHHHHHHHHhCCc---EEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHhHhhccCcceEEC
Confidence 011111 1 11111122334 4666666443 333 33443 5677888663
Q ss_pred --ccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCc---HHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 017968 205 --MRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMS---IVD--------EMYLASLINKGREVFANGTTDPAALPAETV 270 (363)
Q Consensus 205 --~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (363)
+|. .+...+++.+.+|.+++++|||+|+..... +.. +..+..++. ......+|+.++
T Consensus 277 PPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~---------lv~~g~lsl~~~ 347 (430)
T COG0044 277 PPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLT---------LVKKGRLSLERL 347 (430)
T ss_pred CCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHH---------HHHcCCcCHHHH
Confidence 112 234568899999999999999999863211 111 111112222 112446999999
Q ss_pred HHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEECC
Q 017968 271 LRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 342 (363)
Q Consensus 271 l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~ 342 (363)
++++|.||||++|+++ +|.|++|++|||+|+|++..+.+ ..++|+.+..+.+ .|.+||++|+++|+++
T Consensus 348 v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf~G~~~~g---~v~~Ti~rG~~v~~~~ 423 (430)
T COG0044 348 VELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPFEGFELKG---RVVATILRGKVVYEDG 423 (430)
T ss_pred HHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCCCeEEchhhhccccCCCCcCCCEEee---eEEEEEECCEEEEECC
Confidence 9999999999999975 78999999999999999964443 3456777776665 9999999999999998
Q ss_pred eecc
Q 017968 343 KILL 346 (363)
Q Consensus 343 ~~~~ 346 (363)
+...
T Consensus 424 ~~~~ 427 (430)
T COG0044 424 EVIA 427 (430)
T ss_pred cEec
Confidence 7553
No 51
>PRK06846 putative deaminase; Validated
Probab=99.92 E-value=3.8e-23 Score=194.61 Aligned_cols=278 Identities=15% Similarity=0.146 Sum_probs=182.6
Q ss_pred hhHHHHHHHHHHHHHhCCceEeecCCc-------CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHH
Q 017968 18 EDSYISTLLCGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 90 (363)
Q Consensus 18 ed~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
++....+..++..+++.|+|+++++.. ...+...++..+.+.........+. ..+... ...
T Consensus 110 ~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~~v~~~~~a~~-~~g~~~----~~~------- 177 (410)
T PRK06846 110 PTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKDGFTYEIVAFP-QHGLLR----SNS------- 177 (410)
T ss_pred HHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhCcceEEEEecc-CcccCC----ccH-------
Confidence 344455557777888889999876542 1123333444453322211111111 111100 011
Q ss_pred HHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCC
Q 017968 91 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL 170 (363)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (363)
...+++....+...++ ++.++....++.+.++++++.|+++|+++++|+.+...+.....+ ..++.+++.++.
T Consensus 178 ~~lL~~al~~Ga~~i~-gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~~~~~~~------~~~~~~~~~gl~ 250 (410)
T PRK06846 178 EPLMREAMKMGAHLVG-GVDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVATIK------YLVETTEEAQWK 250 (410)
T ss_pred HHHHHHHHHcCCCEEe-CCCCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCChhHHHHH------HHHHHHHHhCCC
Confidence 1222222222223333 455666667888999999999999999999999876643332221 267788888877
Q ss_pred CCCeeEEEeecC---ChhHH----HHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCC----CCCCCCcH
Q 017968 171 QNNLLSAHTVWV---NHTEI----GLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA----PSNNRMSI 238 (363)
Q Consensus 171 ~~~~~~~H~~~~---~~~~~----~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~----~~~~~~~~ 238 (363)
+ +..++|+.++ +++++ +++++.|+.+++|+. . .+..|+++++++|+++++|||++ .+....|+
T Consensus 251 ~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~----~~~g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~~~~d~ 325 (410)
T PRK06846 251 G-KVTISHAFALGDLNEEEVEELAERLAAQGISITSTVP----IGRLHMPIPLLHDKGVKVSLGTDSVIDHWSPFGTGDM 325 (410)
T ss_pred C-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCC----CCCCCCCHHHHHhCCCeEEEecCCCCCCCcCCCCCCH
Confidence 7 8999999975 56664 478999999887542 3 67899999999999999999975 12235689
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhh
Q 017968 239 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 318 (363)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~ 318 (363)
+++++.+....+.. ..-++.++++|+|.+ |+.+++++.+|+|++|+.||||++|.+. +...
T Consensus 326 ~~~~~~~~~~~~~~----------~~~~~~~~l~~~T~~-a~~l~~~~~~G~l~~G~~ADlvlld~~~--------~~~~ 386 (410)
T PRK06846 326 LEKANLLAELYRWS----------DERSLSRSLALATGG-VLPLNDEGERVWPKVGDEASFVLVDASC--------SAEA 386 (410)
T ss_pred HHHHHHHHHHhcCC----------CHHHHHHHHHHHcCC-ccccccCCCccCCCCCCcccEEEEeCCC--------hHHH
Confidence 99888766544321 112467899999988 4567876678999999999999999853 1111
Q ss_pred hhccccCCCccEEEEccEEEEEC
Q 017968 319 LVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 319 ~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+ .....+..||++|++||..
T Consensus 387 ~---~~~~~v~~v~~~G~~v~~~ 406 (410)
T PRK06846 387 V---ARQSPRTAVFHKGQLVAGS 406 (410)
T ss_pred H---HhcCCceEEEECCEEEeee
Confidence 1 2336899999999999964
No 52
>PRK08044 allantoinase; Provisional
Probab=99.91 E-value=1.1e-23 Score=199.62 Aligned_cols=214 Identities=13% Similarity=0.143 Sum_probs=137.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHH--HhhcCC-------CCC-----------hHHHHHHhCCCCCCeeE
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV--MDTRKV-------DHG-----------TVTFLDKIEFLQNNLLS 176 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~--~~~~~~-------~~~-----------~~~~~~~~~~~~~~~~~ 176 (363)
.+...+.++++.+++.|.++.+|+.+........ ....|. ... .+...+.. +.+.++
T Consensus 164 ~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~---g~~vhi 240 (449)
T PRK08044 164 VNDWQFYKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVA---GCRLHV 240 (449)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHh---CCCEEE
Confidence 3566788888999999999999998765311111 111110 000 11122222 334444
Q ss_pred EEeecCCh-hHHHHHHhCC--CeEEEChhhhc-------------------cc-cCcccHHHHHHcCCeEEEecCCCCCC
Q 017968 177 AHTVWVNH-TEIGLLSRAG--VKVSHCPASAM-------------------RM-LGFAPIKEMLHADICVSLGTDGAPSN 233 (363)
Q Consensus 177 ~H~~~~~~-~~~~~~~~~g--~~v~~~p~~~~-------------------~~-~~~~~~~~~l~~G~~~~lgTD~~~~~ 233 (363)
.|...... +.+...++.| +++++||++.. |. .+...+++++..|.+++|+|||.|++
T Consensus 241 ~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~sDH~P~~ 320 (449)
T PRK08044 241 CHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCP 320 (449)
T ss_pred EeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHhCCCceEEEcCCCCCC
Confidence 44443222 2344455555 66677886642 11 23567888899999999999999975
Q ss_pred CC---CcHHHHH--------HHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEE
Q 017968 234 NR---MSIVDEM--------YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 302 (363)
Q Consensus 234 ~~---~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~ 302 (363)
.. .++++.. .+..++... ....+++++++++++|.||||++|++ ++|+|++|++|||+++
T Consensus 321 ~~~K~~~~~~~~~g~~g~e~~l~~~~~~~--------v~~~~l~~~~~v~~~s~npA~~lgl~-~~G~i~~G~~ADlvi~ 391 (449)
T PRK08044 321 PEMKAGNIMEAWGGIAGLQNCMDVMFDEA--------VQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFI 391 (449)
T ss_pred hHHccCChhhCCCCceEHHHHHHHHHHHH--------HHcCCCCHHHHHHHHHHhHHHHhCCC-CCCcCCCCCccCEEEE
Confidence 21 1232221 111111111 12345999999999999999999995 4799999999999999
Q ss_pred cCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEECCeec
Q 017968 303 DPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 345 (363)
Q Consensus 303 d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 345 (363)
|++..+.+ ..++|+.+..+.+ +|.+||++|++||++++.+
T Consensus 392 d~~~~~~v~~~~~~s~~~~sp~~G~~l~G---~v~~t~~~G~~v~~~~~~~ 439 (449)
T PRK08044 392 QPNSSYVLKNEDLEYRHKVSPYVGRTIGA---RITKTILRGDVIYDIEQGF 439 (449)
T ss_pred CCCCcEEECHHHccccCCCCCCCCCEEee---eEEEEEECCEEEEECCccc
Confidence 99865443 3456777776665 8999999999999988754
No 53
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=99.91 E-value=2.7e-22 Score=185.42 Aligned_cols=261 Identities=21% Similarity=0.255 Sum_probs=173.7
Q ss_pred HHHHHHhCCceEeecCCc-----CC---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhc
Q 017968 27 CGIELIHSGVTCFAEAGG-----QH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 98 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~-----~~---~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (363)
++.+++++|||||+|+.. .. +...+++..+.|+|.+.....++. |......+....+ .+++.+.
T Consensus 82 ~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~~----p~~t~t~~~~~d~----~~~d~ii 153 (389)
T TIGR01975 82 TLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYHV----PSRTITGSVESDL----LLIDKVI 153 (389)
T ss_pred HHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEcccccC----CCcccccchhhhe----eeehhhc
Confidence 578999999999999863 22 447889999999999998877654 3333322222222 2244443
Q ss_pred CCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcC----Ce--eeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCC
Q 017968 99 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK----TG--IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 172 (363)
Q Consensus 99 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g----~~--v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (363)
|.-++.++.|.....+.+++.++.+.++..| ++ +++|.++.....+.. .+.++...+...
T Consensus 154 ----G~~~ia~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~~l~~l----------~~~~~~~di~~~ 219 (389)
T TIGR01975 154 ----GVGEIAISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKRALQPI----------YELVENTDVPIT 219 (389)
T ss_pred ----ccceEEEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchhhHHHH----------HHHHHhcCCChh
Confidence 2224788888888889999999999999988 99 999998876554432 233333333221
Q ss_pred CeeEEEeec---CChhHHHHHHhCCCeEEEChhhhcc-c--cCc---ccHHHHHHcCCe---EEEecCCCCCCCCC----
Q 017968 173 NLLSAHTVW---VNHTEIGLLSRAGVKVSHCPASAMR-M--LGF---APIKEMLHADIC---VSLGTDGAPSNNRM---- 236 (363)
Q Consensus 173 ~~~~~H~~~---~~~~~~~~~~~~g~~v~~~p~~~~~-~--~~~---~~~~~~l~~G~~---~~lgTD~~~~~~~~---- 236 (363)
.....|... +-++.++.+ ++|..+.++-..... + ... ..++.++++|++ +++|||++.+....
T Consensus 220 ~f~pth~~r~~~l~~~~i~~~-~~gg~iDv~~~~~~~~l~~~~~~~~~~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g 298 (389)
T TIGR01975 220 QFLPTHINRNVPLFEAGLEFA-KKGGTIDLTSSIDPQFRKEGEVAPAEGIKKALEAGVPLEKVTFSSDGNGSQPFFDENG 298 (389)
T ss_pred heecCccCCCHHHHHHHHHHH-HhCCcEEEeCCCCccchhccccChHHHHHHHHHcCCCcceEEEEeCCCCCCCcccccc
Confidence 222222211 012235554 445556665322222 1 122 245889999996 59999986321111
Q ss_pred -----------cHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCC
Q 017968 237 -----------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 305 (363)
Q Consensus 237 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~ 305 (363)
+++.+++.+. ...+++++++++++|.|||+++|++ ++|.|++|++|||+++|.+
T Consensus 299 ~~~~~g~g~~~sl~~~~~~lv--------------~~g~ls~~eal~~~T~npA~~Lgl~-~~G~I~~G~~ADlvild~~ 363 (389)
T TIGR01975 299 ELTGLGVGSFETLFEEVREAV--------------KDGDVPLEKALRVITSNVAGVLNLT-GKGEISPGNDADLVVLDPD 363 (389)
T ss_pred ccccCCcCcHHHHHHHHHHHH--------------HhCCCCHHHHHHHHHHHHHHHhCCC-CCCeECCCCcCCEEEEcCC
Confidence 1233332211 1224899999999999999999997 6899999999999999976
Q ss_pred CCCCCCcCChhhhhhccccCCCccEEEEccEEEEECCeec
Q 017968 306 SWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 345 (363)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 345 (363)
..+..||.+|++++++++++
T Consensus 364 --------------------~~i~~v~~~G~~v~~~g~~~ 383 (389)
T TIGR01975 364 --------------------LRIHSVIARGKLMVKDGKAC 383 (389)
T ss_pred --------------------CCEEEEEECCEEEEECCEEE
Confidence 27889999999999999976
No 54
>PRK09236 dihydroorotase; Reviewed
Probab=99.91 E-value=8.3e-23 Score=194.04 Aligned_cols=154 Identities=21% Similarity=0.280 Sum_probs=109.5
Q ss_pred EEeecCChhHHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCCCC------------CCCcHHHHHH
Q 017968 177 AHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN------------NRMSIVDEMY 243 (363)
Q Consensus 177 ~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~------------~~~~~~~~~~ 243 (363)
.|+.++++++++. .|..+.+||. ++. .+..++++++++|+++++||||+|+. .+...++..
T Consensus 262 ~H~l~l~~~~~~~---~~~~~~~~Pp--lr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~- 335 (444)
T PRK09236 262 VHHLWFDDSDYAR---LGNLIKCNPA--IKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLPLVQHA- 335 (444)
T ss_pred hhhhhcCHHHHhc---cCceEEECCC--CCCHHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcccHHHH-
Confidence 4555666665442 3667777773 555 67789999999999999999999873 112222222
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhcc-
Q 017968 244 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYC- 322 (363)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~- 322 (363)
+..+++.. ....++++++++++|.|||+++|++ ++|+|++|++|||+++|++..+..+.+++.....+.
T Consensus 336 l~~l~~~v---------~~~~~~~~~~~~~~t~~pA~~lgl~-~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp 405 (444)
T PRK09236 336 LPALLELV---------HEGKLSLEKVVEKTSHAPAILFDIK-ERGFIREGYWADLVLVDLNSPWTVTKENILYKCGWSP 405 (444)
T ss_pred HHHHHHHH---------HhcCCCHHHHHHHHHHhHHHhcCCC-CCCccccCCcCCEEEEcCCCCEEEchHHhcccCCCCC
Confidence 22222211 1235999999999999999999995 579999999999999999877666544443332222
Q ss_pred ----ccCCCccEEEEccEEEEECCeecc
Q 017968 323 ----MRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 323 ----~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
.....|.+||++|++||++|+++.
T Consensus 406 ~~g~~~~g~v~~t~v~G~~v~~~g~~~~ 433 (444)
T PRK09236 406 FEGRTFRSRVATTFVNGQLVYHNGQLVE 433 (444)
T ss_pred CCCCEEeeeEEEEEECCEEEEECCEEcc
Confidence 123489999999999999998763
No 55
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=99.91 E-value=4.9e-22 Score=187.31 Aligned_cols=234 Identities=18% Similarity=0.144 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEeccCccc--cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH
Q 017968 84 DDCIQSQKELYAKHHHAADGRIRIWFGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 161 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 161 (363)
...+.+..+++++.... |.+.+-.+....+ ..+.+++.+++++|+++|.++.+|+.+........ ..
T Consensus 163 ~~~~~~~~~l~~~al~~--Ga~g~~~~~~y~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~e~~a---------v~ 231 (415)
T cd01297 163 EEELAKMRELLREALEA--GALGISTGLAYAPRLYAGTAELVALARVAARYGGVYQTHVRYEGDSILEA---------LD 231 (415)
T ss_pred HHHHHHHHHHHHHHHHC--CCeEEEcccccCCcccCCHHHHHHHHHHHHHcCCEEEEEECcccccHHHH---------HH
Confidence 34456666665443322 2222222222222 56889999999999999999999997653211110 12
Q ss_pred HHHHHhCCCCCCeeEEEeecCCh----------hHHHHHHhCC--CeEEEChhhhccccCcccHHHHHHcCCeEEEecCC
Q 017968 162 TFLDKIEFLQNNLLSAHTVWVNH----------TEIGLLSRAG--VKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDG 229 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H~~~~~~----------~~~~~~~~~g--~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgTD~ 229 (363)
+.++.....+.+.+++|++.... +.++..++.| ++..+||.... ...+++++++. .+++++|||
T Consensus 232 ~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~G~~v~~e~~p~~~~---~~~~~~~l~~~-~~~~i~SDh 307 (415)
T cd01297 232 ELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAEGLQVTADVYPYGAG---SEDDVRRIMAH-PVVMGGSDG 307 (415)
T ss_pred HHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHhCCcEEEEeCCCCCC---cHHHHHHHHcC-CCceeeeCC
Confidence 22223333466789999988776 3455666655 45557774322 14567777776 999999999
Q ss_pred CCCCC-CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCC
Q 017968 230 APSNN-RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 308 (363)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~ 308 (363)
.|.+. ....... +..++.... .....++++++++++|.|||+++|++ ++|+|++|++|||||||++...
T Consensus 308 ~~~~~~~~~~~~~--~~~~l~~~~-------~~~~~~~~~~~~~~~t~~pA~~~gl~-~~G~l~~G~~ADlvv~d~~~~~ 377 (415)
T cd01297 308 GALGKPHPRSYGD--FTRVLGHYV-------RERKLLSLEEAVRKMTGLPARVFGLA-DRGRIAPGYRADIVVFDPDTLA 377 (415)
T ss_pred CcCCCCCcchhCC--HHHHHHHHh-------cccCCCCHHHHHHHHHHHHHHHhCCC-CCceeCCCCCCCEEEEcccccc
Confidence 98431 0011111 111221110 01223899999999999999999996 4699999999999999998755
Q ss_pred CCCcCChhhhhhccccCCCccEEEEccEEEEECCeeccc
Q 017968 309 MVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLL 347 (363)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~ 347 (363)
..+..++ +......|.+||++|+++++++++++.
T Consensus 378 ~~~~~~~-----~~~~~~~v~~viv~G~~v~~~~~~~~~ 411 (415)
T cd01297 378 DRATFTR-----PNQPAEGIEAVLVNGVPVVRDGAFTGA 411 (415)
T ss_pred cccchhh-----hccCCCCceEEEECCEEEEECCEECCC
Confidence 4443221 123335799999999999999998754
No 56
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=99.90 E-value=4.7e-22 Score=189.79 Aligned_cols=300 Identities=15% Similarity=0.112 Sum_probs=168.6
Q ss_pred chhHHHHHHHHHHHHHhCCceEeecCCc-C-----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHH
Q 017968 17 EEDSYISTLLCGIELIHSGVTCFAEAGG-Q-----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 90 (363)
Q Consensus 17 ~ed~~~~~~~~~~~~l~~GvTtv~d~~~-~-----~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
.+++...++++ +++||||+++|+. . ..+.+....+...-.....+.... +..+ . ..+++
T Consensus 69 ~e~~~~~s~aa----l~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~-----~---~~~ei 133 (447)
T cd01315 69 WEGFETGTKAA----AAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWG---GLVP-----G---NLDQL 133 (447)
T ss_pred cccHHHHHHHH----HhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEE---eecC-----C---CHHHH
Confidence 46777777877 9999999999962 1 122222222222111111111110 0000 0 12233
Q ss_pred HHHHHHhcCCCCCCeEEEeccCc---cccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhh--cC-------CC-
Q 017968 91 KELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT--RK-------VD- 157 (363)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~--~~-------~~- 157 (363)
.++.+. +...++++++.+. ....+.+.+.++++.++++|+++++|+............. .| ..
T Consensus 134 ~~l~~~----G~~giKv~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g~~~~~~~~~~ 209 (447)
T cd01315 134 RPLDEA----GVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKGKRDYRDYLAS 209 (447)
T ss_pred HHHHHc----CCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcCCCChHHhhcc
Confidence 333221 2234666654432 1235778899999999999999999997653211111100 00 00
Q ss_pred -CC-----hHH-HHHHhCCCCCCeeEEEeecCChhH-HHHHHhCC--CeEEEChhhhc-------------------cc-
Q 017968 158 -HG-----TVT-FLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVSHCPASAM-------------------RM- 207 (363)
Q Consensus 158 -~~-----~~~-~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~~- 207 (363)
+. .+. .+......+.+.++.|......-+ ++.++..| +++++||++.. +.
T Consensus 210 ~p~~~e~~~~~~~~~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~~~~~~~~~Pplr~~ 289 (447)
T cd01315 210 RPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPIRDA 289 (447)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccCCCCceEECCCCCCh
Confidence 00 011 111111223345555544322222 33444455 55667775431 11
Q ss_pred cCcccHHHHHHcCCeEEEecCCCCCCCC------CcHHHH--------HHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 017968 208 LGFAPIKEMLHADICVSLGTDGAPSNNR------MSIVDE--------MYLASLINKGREVFANGTTDPAALPAETVLRM 273 (363)
Q Consensus 208 ~~~~~~~~~l~~G~~~~lgTD~~~~~~~------~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 273 (363)
.+...++++++.|.+++++|||.|+... .+++.. ..+..++... ....++++++++++
T Consensus 290 ~~~~~l~~~l~~g~i~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 361 (447)
T cd01315 290 ANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEA--------VNKRGLSLEDIARL 361 (447)
T ss_pred HHHHHHHHHHhCCceeEEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHH--------HHcCCCCHHHHHHH
Confidence 2345677789999999999999987410 111111 1111111110 11235899999999
Q ss_pred HHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCC--------cCChhhhhhccccCCCccEEEEccEEEEECCeec
Q 017968 274 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP--------VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 345 (363)
Q Consensus 274 ~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 345 (363)
+|.|||+++|+++++|+|++|++|||+|+|++..+... .++|+....+. .+|.+||++|+++|++++++
T Consensus 362 ~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~d~~~~~~~~~~~~~~~~~~~~~~g~~~~---g~v~~ti~~G~~v~~~~~~~ 438 (447)
T cd01315 362 MCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKISPYVGRTLK---GRVHATILRGTVVYQDGEVV 438 (447)
T ss_pred HhHHHHHHhCCCCCCccccCCCCCCEEEEcCCCCEEEcHHHccccCCCCCccCeEEe---eeEEEEEECCEEEEECCeEc
Confidence 99999999999766899999999999999988643221 23444444333 47999999999999999987
Q ss_pred c
Q 017968 346 L 346 (363)
Q Consensus 346 ~ 346 (363)
.
T Consensus 439 ~ 439 (447)
T cd01315 439 G 439 (447)
T ss_pred c
Confidence 4
No 57
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.90 E-value=4.3e-22 Score=186.71 Aligned_cols=262 Identities=21% Similarity=0.251 Sum_probs=169.4
Q ss_pred HHHHHHHhCCceEeecCCc-----CCH---HHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHh
Q 017968 26 LCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 97 (363)
Q Consensus 26 ~~~~~~l~~GvTtv~d~~~-----~~~---~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (363)
.++.+++++||||++||.. ... ....+++.+.|++.+.....++. +..+ ....+.+...+.+++
T Consensus 81 ~~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~ 152 (388)
T PRK10657 81 VQLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGSYHV----PVRT----ITGSIRKDIVLIDKV 152 (388)
T ss_pred HHHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecCCCC----Cchh----hhcchhhceehhhhh
Confidence 3556669999999999872 222 34466777999999865554432 1100 111111111223333
Q ss_pred cCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCC------eeeEeccCChhhHHHHHhhcCCCCChH-HHHHHhCCC
Q 017968 98 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFL 170 (363)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 170 (363)
.+. + ++.+.++.....+.+.+.++.+.++..+. ++++|+.+.....+ .+ +.+++.|+.
T Consensus 153 ~g~--g--~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~~~l~-----------~v~~~l~~~Gv~ 217 (388)
T PRK10657 153 IGV--G--EIAISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGKKGLQ-----------PLFELLENTDIP 217 (388)
T ss_pred hCc--c--eeeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCchHHHH-----------HHHHHHHhcCCC
Confidence 321 1 44566666667788999988888875444 89999986443221 23 345677877
Q ss_pred CCCeeEEEeec---CChhHHHHHHhCCCeEEEC-hhhhccc----cCcccHHHHHHcCC---eEEEecCCCCCCCCC---
Q 017968 171 QNNLLSAHTVW---VNHTEIGLLSRAGVKVSHC-PASAMRM----LGFAPIKEMLHADI---CVSLGTDGAPSNNRM--- 236 (363)
Q Consensus 171 ~~~~~~~H~~~---~~~~~~~~~~~~g~~v~~~-p~~~~~~----~~~~~~~~~l~~G~---~~~lgTD~~~~~~~~--- 236 (363)
....+..|+.+ ..++.++.+ +.|..+.+. +...++. .....++++++.|+ +++++||++..+...
T Consensus 218 ~~~~~~~H~~~~~~~~~~~~~~~-~~G~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~ 296 (388)
T PRK10657 218 ISQFLPTHVNRNEPLFEQALEFA-KKGGVIDLTTSDPDFLGEGEVAPAEALKRALEAGVPLSRVTLSSDGNGSLPKFDED 296 (388)
T ss_pred cceeeCcccCCCHHHHHHHHHHH-HcCCeEEEecCCCcccccCccCHHHHHHHHHHcCCChhheEEECCCCCCCceeccC
Confidence 66666777665 223334444 456666333 3222222 23467889999998 679999985432111
Q ss_pred ------------cHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcC
Q 017968 237 ------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDP 304 (363)
Q Consensus 237 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~ 304 (363)
.+...+..+. ...+++++++++|+|.|||+++|+++ +|+|++|++|||+++|.
T Consensus 297 g~~~~~g~~~~~~l~~~~~~~~--------------~~~gis~~~~l~~aT~npA~~lg~~~-~G~l~~G~~AD~vv~~~ 361 (388)
T PRK10657 297 GNLVGLGVGSVESLLEEVRELV--------------KDEGLPLEDALKPLTSNVARFLKLNG-KGEILPGKDADLLVLDD 361 (388)
T ss_pred CCEeccCcCchhhHHHHHHHHH--------------HhcCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEECC
Confidence 1233332211 12258999999999999999999975 89999999999999993
Q ss_pred CCCCCCCcCChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 305 FSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
+ ..+..||++|++|++++++++
T Consensus 362 ~--------------------~~~~~~~~~G~~v~~~~~~~~ 383 (388)
T PRK10657 362 D--------------------LRIEQVIAKGKLMVKDGKALV 383 (388)
T ss_pred C--------------------CCEEEEEECCEEEEECCEEec
Confidence 2 378999999999999999764
No 58
>PRK07627 dihydroorotase; Provisional
Probab=99.90 E-value=2.8e-22 Score=188.49 Aligned_cols=289 Identities=15% Similarity=0.136 Sum_probs=166.1
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCCcCC--------HHHHHHHHH-HcCCeEEEecccccCCCCCCcccccCChHHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVE-LLGLRACLVQSTMDCGEGLPASWAVRTTDDC 86 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~--------~~~~~~~~~-~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
..|++.+.++++ +.+||||+++|.... .+....... ..+...+. ...+..+ .....
T Consensus 71 ~~e~~~t~s~aa----~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g----------~~~~~ 135 (425)
T PRK07627 71 YKATLESEMAAA----VAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYP-LGALTVG----------LKGEV 135 (425)
T ss_pred ccCcHHHHHHHH----HhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEE-eCeEEcC----------CCccC
Confidence 468888899888 999999999986422 112222221 22333322 2222111 01111
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHH------HhhcCCCCCh
Q 017968 87 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV------MDTRKVDHGT 160 (363)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~------~~~~~~~~~~ 160 (363)
+.+..++.+. + +.. +........+...+.++++.+++.|.++.+|+.+........ ....+....+
T Consensus 136 ~~~i~~l~~~------G-~~~-fk~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~~~~~~g~~~~~~~~~~~P 207 (425)
T PRK07627 136 LTEMVELTEA------G-CVG-FSQANVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRGGVAASGAVASRLGLSGVP 207 (425)
T ss_pred HHHHHHHHhC------C-EEE-EEcCCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhCCCcCCCHhHHHcCCCCCC
Confidence 2333333221 2 221 222222345677899999999999999999997643211000 0000000000
Q ss_pred --HH------HHHHhCCCCCCeeEEEeecCChhH-HHHHHhCC--CeEEEChhhhc-------------------cc-cC
Q 017968 161 --VT------FLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVSHCPASAM-------------------RM-LG 209 (363)
Q Consensus 161 --~~------~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~~-~~ 209 (363)
.+ .+.-....+.+.++.|.+....-+ +...++.| +++++||++-. |. .+
T Consensus 208 ~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d 287 (425)
T PRK07627 208 VAAETIALHTIFELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGYFDSQFRLDPPLRSQRD 287 (425)
T ss_pred HHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhccCCceEEeCCCCCHHH
Confidence 11 111112223344444444322222 34445566 66788997632 11 23
Q ss_pred cccHHHHHHcCCeEEEecCCCCCCCC--C-cHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHH
Q 017968 210 FAPIKEMLHADICVSLGTDGAPSNNR--M-SIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATING 278 (363)
Q Consensus 210 ~~~~~~~l~~G~~~~lgTD~~~~~~~--~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~p 278 (363)
...+++++++|.+++++|||.|+... . +++. +..+..++... ...+++++++++++|.||
T Consensus 288 ~~~L~~~l~~G~id~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~~---------~~~~i~~~~~l~~~t~~p 358 (425)
T PRK07627 288 REAIRAALADGTIDAICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLKWA---------DEAKVPLARALARITSAP 358 (425)
T ss_pred HHHHHHHHhcCCCcEEEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHHH---------HhCCCCHHHHHHHHHHHH
Confidence 45688899999999999999887421 1 1111 11111111110 133599999999999999
Q ss_pred HHhccCCCCccccCCCCcccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 279 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 279 A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
|+++|+ ++|.|++|++|||+++|++..+.+ +.++|+....+.+ +|.+||++|++||++
T Consensus 359 A~~lg~--~~G~l~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~sp~~g~~~~g---~v~~t~v~G~~v~~~ 424 (425)
T PRK07627 359 ARVLGL--PAGRLAEGAPADLCVFDPDAHWRVEPRALKSQGKNTPFLGYELPG---RVRATLVAGQVAFER 424 (425)
T ss_pred HHHhCC--CCCcccCCCcCCEEEECCCCcEEEChhhccccCCCCCCcCCEeee---EEEEEEECCEEEeec
Confidence 999999 469999999999999999863332 3456776665543 799999999999976
No 59
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=6.6e-22 Score=183.03 Aligned_cols=188 Identities=24% Similarity=0.338 Sum_probs=142.1
Q ss_pred ccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHh
Q 017968 113 QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR 192 (363)
Q Consensus 113 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 192 (363)
.....+++++++++..|++.|+++.+|+.+.. .+....+.+. ..+.|+.+++.+..+.+++
T Consensus 213 ~~~~fs~~e~~~~l~~a~~~g~~v~~HA~~~~---------------g~~~A~~~g~----~s~~H~~~ld~~~~~~~a~ 273 (406)
T COG1228 213 EGGQFSPEEIRAVLAAALKAGIPVKAHAHGAD---------------GIKLAIRLGA----KSAEHGTLLDHETAALLAE 273 (406)
T ss_pred cccccCHHHHHHHHHHHHHCCCceEEEecccc---------------hHHHHHHhCc----ceehhhhhcCHhHHHHHhh
Confidence 34456888899999999999999999998654 2222333333 3578999999999999999
Q ss_pred --CCCe-EEEChhhhccc--cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 017968 193 --AGVK-VSHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 267 (363)
Q Consensus 193 --~g~~-v~~~p~~~~~~--~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (363)
.|.. .+..|.....+ ....+++.+++.|++++++||+.|.++..++..++. +..+ .+|++
T Consensus 274 ~~~g~~~~~l~p~~~~~l~e~~~~~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~---l~~~------------~gmtp 338 (406)
T COG1228 274 KGAGTPVPVLLPRTKFELRELDYKPARKLIDAGVKVAIGTDHNPGTSHGSLALEMA---LAVR------------LGMTP 338 (406)
T ss_pred ccCCCccccccchhhhhhhcccchhHHHHHHCCCEEEEEcCCCCCchhhHHHHHHH---HHHH------------cCCCH
Confidence 6653 34555554444 557889999999999999999998753112222222 2222 23999
Q ss_pred HHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEECCe
Q 017968 268 ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 343 (363)
Q Consensus 268 ~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~ 343 (363)
+++|+.+|.|||+++|+.+++|+|++||+|||||+|.+++..+ .+......+..||++|+++++.+.
T Consensus 339 ~EaL~a~T~naA~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i---------~y~~~~~~v~~v~k~G~~~~~~~~ 405 (406)
T COG1228 339 EEALKAATINAAKALGLADKVGSLEPGKDADLVVWDGDPLADI---------PYFLGLNKVEAVIKDGKVVYERGS 405 (406)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCccCEEEEcCCChhhc---------cccccCCceEEEEECCEEeecCCC
Confidence 9999999999999999999999999999999999999854332 222334589999999999997653
No 60
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.89 E-value=1.9e-21 Score=187.16 Aligned_cols=264 Identities=21% Similarity=0.192 Sum_probs=173.6
Q ss_pred CCCchhHHHHHHHHHHHHHhCCceEeecCCcCCH--HHHHHHHHHcC---CeEEEecccccCCCCCCcccccCChHHHHH
Q 017968 14 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV--SEMAKAVELLG---LRACLVQSTMDCGEGLPASWAVRTTDDCIQ 88 (363)
Q Consensus 14 ~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~g---ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (363)
..++++++...+.++..+++.||||+.|+..... ....+...+.| +|.......... ......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~GiT~v~d~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~~------------~~~~~~ 242 (479)
T cd01300 175 PPTPEERRAALRAAARELASLGVTTVHDAGGGAADDIEAYRRLAAAGELTLRVRVALYVSPL------------AEDLLE 242 (479)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCChhhHHHHHHHHHHCCCCeEEEEEEeccccc------------hhhhhh
Confidence 5678888888899999999999999999864221 23344444443 443322111100 000000
Q ss_pred HHHHHHHHhcC---CCCCCeEEEecc-------------------CccccCCHHHHHHHHHHHHHcCCeeeEeccCChhh
Q 017968 89 SQKELYAKHHH---AADGRIRIWFGI-------------------RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 146 (363)
Q Consensus 89 ~~~~~~~~~~~---~~~~~v~~~~~~-------------------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 146 (363)
+... ...... ..-+.+|+++.. .+....+++.+.++++.|++.|+++++|+.+...
T Consensus 243 ~~~~-~~~~~~~~~~~~~~vKl~~DG~~~~~ta~l~~pY~~~~~~~g~~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~- 320 (479)
T cd01300 243 ELGA-RKNGAGDDRLRLGGVKLFADGSLGSRTAALSEPYLDSPGTGGLLLISPEELEELVRAADEAGLQVAIHAIGDRA- 320 (479)
T ss_pred HHhh-hccCCCCCcEEEeeEEEEEcCCCCcccccccCCcCCCCCCCCCccCCHHHHHHHHHHHHHCCCCEEEEEecHHH-
Confidence 0000 000000 001234444311 1123457899999999999999999999986443
Q ss_pred HHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhcc--------------ccCccc
Q 017968 147 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR--------------MLGFAP 212 (363)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~--------------~~~~~~ 212 (363)
.....+. ........+..+.+..+.|+..+++++++++++.|+.+++||.+... .....|
T Consensus 321 i~~~l~~------~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~gv~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p 394 (479)
T cd01300 321 VDTVLDA------LEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKLGVIASVQPNHLYSDGDAAEDRRLGEERAKRSYP 394 (479)
T ss_pred HHHHHHH------HHHHHHhcCCCCCCceeeecccCCHHHHHHHHHcCCceEeCcccccCchHHHHHhcccHHHHhcCch
Confidence 2222211 11222334556778899999999999999999999999999986421 135788
Q ss_pred HHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccC
Q 017968 213 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 292 (363)
Q Consensus 213 ~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~ 292 (363)
++.+++.|+++++|||+++.+ .+++..++.+.......... .......+++.++++++|.|||+++|+++++|+|+
T Consensus 395 ~~~~~~~Gv~v~lGSD~~~~~--~~p~~~~~~av~~~~~~~~~--~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe 470 (479)
T cd01300 395 FRSLLDAGVPVALGSDAPVAP--PDPLLGIWAAVTRKTPGGGV--LGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLE 470 (479)
T ss_pred HHHHHHCCCeeeccCCCCCCC--CCHHHHHHHHheeeCCCCCC--CCCccccCCHHHHHHHHHHHHHHHhcccccccccc
Confidence 999999999999999997653 56777776654322211100 00123569999999999999999999988899999
Q ss_pred CCCcccEEE
Q 017968 293 AGKKADMVV 301 (363)
Q Consensus 293 ~G~~ADlvv 301 (363)
+|++|||||
T Consensus 471 ~Gk~ADlvv 479 (479)
T cd01300 471 PGKLADFVV 479 (479)
T ss_pred CCcccceeC
Confidence 999999986
No 61
>PRK01211 dihydroorotase; Provisional
Probab=99.89 E-value=7.8e-23 Score=190.45 Aligned_cols=287 Identities=12% Similarity=0.088 Sum_probs=162.3
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCceEeecCCcC-----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHH
Q 017968 13 SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCI 87 (363)
Q Consensus 13 ~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
..-..||+.++|++| +++||||++||... +.+.+....+...-..+.-+..... .. . ...
T Consensus 59 g~~~ked~~s~s~AA----aaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~---~~----~-~~~--- 123 (409)
T PRK01211 59 GETEKEDFSTGTLSA----IFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSM---ET----G-NNA--- 123 (409)
T ss_pred CCcccCcHHHHHHHH----HcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEec---cC----C-chh---
Confidence 344689999999999 99999999999742 2233322222222111111111110 00 0 000
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHH-----HhhcCCCCC---
Q 017968 88 QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV-----MDTRKVDHG--- 159 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~-----~~~~~~~~~--- 159 (363)
+..+. +...++++.+... .........+.++.+++.|.++.+|+.+........ ...+.....
T Consensus 124 ----~~~~~----g~~~~k~f~~~~~-~~~~~~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~~~~~~rP~~a 194 (409)
T PRK01211 124 ----LILDE----RSIGLKVYMGGTT-NTNGTDIEGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDHDLARPIEC 194 (409)
T ss_pred ----hHHhc----cCcEEEEEcCCCc-CCCccccCHHHHHHHHccCCEEEEeccChHHhhhhhhCcchHhhCCCCCCHHH
Confidence 11111 1123555443211 000001122345667789999999997654311100 011111101
Q ss_pred -hHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhc-----------------cc-cCcccHHHHHHcC
Q 017968 160 -TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM-----------------RM-LGFAPIKEMLHAD 220 (363)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~-----------------~~-~~~~~~~~~l~~G 220 (363)
.....+...+...+ .|.+|++..+-- ..+++++||++-. |. .+...+++++..|
T Consensus 195 E~~ai~~~~~la~~~---~hi~HvSt~~~~----~~vt~Ev~phhL~l~~~~~~~~~~kvnPPLRs~~d~~aL~~~l~dG 267 (409)
T PRK01211 195 EIKAVKYVKNLDLKT---KIIAHVSSIDVI----GRFLREVTPHHLLLNDDMPLGSYGKVNPPLRDRWTQERLLEEYISG 267 (409)
T ss_pred HHHHHHHHHHHhCCC---cEEEEecChhhc----CceEEEecHHHHccccccccCCceeEcCCCCCHHHHHHHHHHHhCC
Confidence 11112222232233 455555543311 3688889997642 11 2356788899999
Q ss_pred CeEEEecCCCCCCCC-----------CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCcc
Q 017968 221 ICVSLGTDGAPSNNR-----------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 289 (363)
Q Consensus 221 ~~~~lgTD~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G 289 (363)
.+++++|||+|+... ..-.+. .+..++. . .....++++++++++|.||||+||+. +|
T Consensus 268 ~ID~i~SDHaP~~~~eK~~~~~a~~G~~gle~-~lpl~~~-~--------v~~~~isl~~~v~~~s~nPAki~gl~--kG 335 (409)
T PRK01211 268 RFDILSSDHAPHTEEDKQEFEYAKSGIIGVET-RVPLFLA-L--------VKKKILPLDVLYKTAIERPASLFGIK--KG 335 (409)
T ss_pred CCCEEeCCCCCCChhHhCCHhhCCCCCCcHHH-HHHHHHH-H--------HHcCCCCHHHHHHHHHHHHHHHhCCC--CC
Confidence 999999999997421 111111 1112221 1 12346999999999999999999993 69
Q ss_pred ccCCCCcccEEEEcCCCCCCCC--------cCChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 290 SLEAGKKADMVVVDPFSWPMVP--------VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 290 ~i~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
.|++|++|||||||++..+.+. .++|+.+.. -. .|.+||++|+++|+++++.+
T Consensus 336 ~l~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~spf~G~~---~~-~v~~tiv~G~~v~~~~~~~~ 396 (409)
T PRK01211 336 KIEEGYDADFMAFDFTNIKKINDKRLHSKCPVSPFNGFD---AI-FPSHVIMRGEVVIDNYELIS 396 (409)
T ss_pred cccCCCcCCEEEEcCCCeEEEChHHhhccCCCCCCCCCE---ec-cEEEEEECCEEEEECCEEcc
Confidence 9999999999999998755432 233444432 12 78999999999999887653
No 62
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=99.88 E-value=8.3e-21 Score=178.63 Aligned_cols=212 Identities=18% Similarity=0.136 Sum_probs=132.4
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCC-------CCCh-------H-HHHHHhCCCCCCeeEEEee
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV-------DHGT-------V-TFLDKIEFLQNNLLSAHTV 180 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~-------~~~~-------~-~~~~~~~~~~~~~~~~H~~ 180 (363)
..+...+.++++.++++|+++.+|+.+......... ..+. ...+ + +.+.-....+.+.++.|.+
T Consensus 143 ~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~-~~g~~~~~~~~~~~p~~aE~~ai~~~~~la~~~~~~~~i~Hvs 221 (411)
T TIGR00857 143 VQDILSMRRALEYAAIAGVPIALHAEDPDLIYGGVM-HEGPSAAQLGLPARPPEAEEVAVARLLELAKHAGCPVHICHIS 221 (411)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecCCHHHHhhhhh-cCCcccHhhCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEeCC
Confidence 457789999999999999999999987543211100 0010 0000 1 0111111223345555544
Q ss_pred cCChhH-HHHHHhCC--CeEEEChhhhc-------------------cc-cCcccHHHHHHcCCeEEEecCCCCCCCCC-
Q 017968 181 WVNHTE-IGLLSRAG--VKVSHCPASAM-------------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNRM- 236 (363)
Q Consensus 181 ~~~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~- 236 (363)
+...-+ +...++.| +++++||++.. |. .+..++++++..|.+++++|||.|+....
T Consensus 222 ~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~~~k 301 (411)
T TIGR00857 222 TKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTLEEK 301 (411)
T ss_pred CHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCChHHc
Confidence 422222 44445555 77788886631 11 23456889999999999999999874210
Q ss_pred --cHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCC
Q 017968 237 --SIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 306 (363)
Q Consensus 237 --~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~ 306 (363)
+++. +..+..+++.. ...+++++++++++|.|||+++|+++ +|.|++|++|||+++|.+.
T Consensus 302 ~~~~~~~~~G~~g~e~~~~~~~~~~---------~~~~~~~~~~~~~~t~~pa~~~g~~~-~G~l~~G~~ADlvi~d~~~ 371 (411)
T TIGR00857 302 TKEFAAAPPGIPGLETALPLLLQLL---------VKGLISLKDLIRMLSINPARIFGLPD-KGTLEEGNPADITVFDLKK 371 (411)
T ss_pred cCCHhhCCCCceeHHHHHHHHHHHH---------HhCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcCCEEEEcCCC
Confidence 1111 11111222111 12258999999999999999999964 5999999999999999987
Q ss_pred CCCCC--------cCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 307 WPMVP--------VHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 307 ~~~~~--------~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.+..+ .++|+.+..+.+ .|..|+++|++|++|
T Consensus 372 ~~~~~~~~~~~~~~~sp~~g~~~~g---~v~~tiv~G~~v~~~ 411 (411)
T TIGR00857 372 EWTINAETFYSKAKNTPFEGMSLKG---KPIATILRGKVVYED 411 (411)
T ss_pred CEEEchHHCccCCCCCCcCCCEEEe---EEEEEEECCEEEecC
Confidence 54432 234554444433 899999999999975
No 63
>PRK00369 pyrC dihydroorotase; Provisional
Probab=99.88 E-value=7.9e-22 Score=182.70 Aligned_cols=154 Identities=12% Similarity=0.168 Sum_probs=107.9
Q ss_pred EEeecCChh-HHHHHHhCCCeEEEChhhhcc---------------c-cCcccHHHHHHcCCeEEEecCCCCCCCC---C
Q 017968 177 AHTVWVNHT-EIGLLSRAGVKVSHCPASAMR---------------M-LGFAPIKEMLHADICVSLGTDGAPSNNR---M 236 (363)
Q Consensus 177 ~H~~~~~~~-~~~~~~~~g~~v~~~p~~~~~---------------~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~---~ 236 (363)
.|.+|+|.. .++..++.|+++++||++-.. . .+...+++++.+ +++++|||+|+... .
T Consensus 193 lhi~HvSt~~~v~~ak~~gvt~Ev~pHhL~l~~~~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHaP~~~~~K~~ 270 (392)
T PRK00369 193 VHITHASNPRTVRLAKELGFTVDITPHHLLVNGEKDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSFEKLQ 270 (392)
T ss_pred EEEEECCCHHHHHHHHHCCCeEEechhHheeccCCCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCCCCCHHHccC
Confidence 455565543 477777889999999987432 1 234567778877 89999999998521 1
Q ss_pred cHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCC
Q 017968 237 SIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 308 (363)
Q Consensus 237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~ 308 (363)
+++. +..+..++. . .....++++++++++|.|||+++|++ + |.|++|++|||+++|++.+.
T Consensus 271 ~f~~~~~Gi~GlE~~lpll~~-~--------v~~~~lsl~~~v~~~s~nPA~ilgl~-~-g~i~~G~~ADlvi~d~~~~~ 339 (392)
T PRK00369 271 PYEVCPPGIAALSFTPPFIYT-L--------VSKGILSIDRAVELISTNPARILGIP-Y-GEIKEGYRANFTVIQFEDWR 339 (392)
T ss_pred CHhhCCCCCeeHHHHHHHHHH-H--------HHcCCCCHHHHHHHHHHHHHHHhCCC-C-CccCCCCccCEEEEeCCcee
Confidence 1111 011111221 1 12345999999999999999999995 3 88999999999999987432
Q ss_pred -----CCCcCChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 309 -----MVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 309 -----~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
....++|+.+..+.+ .|.+||++|++||+++++++
T Consensus 340 ~~~~~sk~~~sp~~G~~l~G---~v~~ti~~G~~v~~~~~~~~ 379 (392)
T PRK00369 340 YSTKYSKVIETPLDGFELKA---SVYATIVQGKLAYLEGEVFP 379 (392)
T ss_pred EccccccCCCCCCCCCEeee---EEEEEEECCEEEEECCeEec
Confidence 123345776665554 99999999999999998763
No 64
>PRK09060 dihydroorotase; Validated
Probab=99.88 E-value=1.1e-20 Score=179.11 Aligned_cols=296 Identities=15% Similarity=0.107 Sum_probs=166.2
Q ss_pred CCchhHHHHHHHHHHHHHhCCceEeecCCcC-----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHH
Q 017968 15 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 89 (363)
Q Consensus 15 ~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (363)
...|++.+.++++ +++||||+++|... +.+.+....+...-.....+...-.. . ..+. .+
T Consensus 71 ~~~e~~~t~~~aa----~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~---~----~~~~----~~ 135 (444)
T PRK09060 71 EHKEDLETGSRAA----VLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFYVGG---T----RDNA----DE 135 (444)
T ss_pred CccchHHHHHHHH----HhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEEecc---C----CCCH----HH
Confidence 3568888888888 99999999998642 23333333333221111111111000 0 0011 12
Q ss_pred HHHHHHHhcCCCCCCeEEEecc--CccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhH--HHHHhhcCC-----C--C
Q 017968 90 QKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN--QVVMDTRKV-----D--H 158 (363)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~--~~~~~~~~~-----~--~ 158 (363)
..++.. +.+ ...+++++.. ......+...+.+++ ++.+.++.+|+.+..... .... ..|. . +
T Consensus 136 l~el~~-~~g--v~g~k~fm~~~~~~~~~~d~~~l~~~~---~~~~~~v~~H~E~~~l~~~~~~~~-~~g~~~~~~~~~p 208 (444)
T PRK09060 136 LAELER-LPG--CAGIKVFMGSSTGDLLVEDDEGLRRIL---RNGRRRAAFHSEDEYRLRERKGLR-VEGDPSSHPVWRD 208 (444)
T ss_pred HHHHHh-hcC--ceEEEEEeccCCCCcccCCHHHHHHHH---HhCCCeEEEECCCHHHHHHHHHHH-hcCCcccccccCC
Confidence 222211 111 1124554432 112223445555554 445889999997643211 1100 1100 0 0
Q ss_pred ChHH------HHHHhCCCCCCeeEEEeecCChhHHHHHHhC--CCeEEEChhhhc--------------------cc-cC
Q 017968 159 GTVT------FLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GVKVSHCPASAM--------------------RM-LG 209 (363)
Q Consensus 159 ~~~~------~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~--g~~v~~~p~~~~--------------------~~-~~ 209 (363)
...+ .+.-....+.+.++.|... .+.++.+++. .+++++||++.. |. ..
T Consensus 209 ~~aE~~av~~~~~la~~~~~~lhi~h~st--~~~v~~i~~~~~~vt~ev~ph~l~l~~~~~~~~~~~~~k~~PPlr~~~~ 286 (444)
T PRK09060 209 EEAALLATRRLVRLARETGRRIHVLHVST--AEEIDFLADHKDVATVEVTPHHLTLAAPECYERLGTLAQMNPPIRDARH 286 (444)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHhCCCeEEEeChHHhccCchhhcccCCceEEEeCCCCCHHH
Confidence 0011 1111222343444555443 3445555543 478889885531 11 23
Q ss_pred cccHHHHHHcCCeEEEecCCCCCCCC------------CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHH
Q 017968 210 FAPIKEMLHADICVSLGTDGAPSNNR------------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 277 (363)
Q Consensus 210 ~~~~~~~l~~G~~~~lgTD~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~ 277 (363)
...+++++++|++++++|||.|+... ..-.+ .....++.. .....++++++++++|.|
T Consensus 287 ~~~l~~al~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e-~~~~l~~~~---------v~~g~l~~~~~~~~~s~~ 356 (444)
T PRK09060 287 RDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTGVQ-TLVPIMLDH---------VNAGRLSLERFVDLTSAG 356 (444)
T ss_pred HHHHHHHHhCCCccEEecCCCCCCHHHhcCCcccCCCCcccHH-HHHHHHHHH---------HHcCCCCHHHHHHHHhHh
Confidence 45688899999999999999997411 11111 112222211 112349999999999999
Q ss_pred HHHhccCCCCccccCCCCcccEEEEcCCCCCCCC--------cCChhhhhhccccCCCccEEEEccEEEEECCeecccC
Q 017968 278 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP--------VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLM 348 (363)
Q Consensus 278 pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d 348 (363)
|||++|++ ++|+|++|++|||+|+|++..+.++ .++|+.+..+.+ +|.+||++|+++|++|++++..
T Consensus 357 pa~~~gl~-~~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sp~~g~~l~g---~~~~tiv~G~~v~~~g~~~~~~ 431 (444)
T PRK09060 357 PARIFGIA-GKGRIAVGYDADFTIVDLKRRETITNEWIASRCGWTPYDGKEVTG---WPVGTIVRGQRVMWDGELVGPP 431 (444)
T ss_pred HHHHhCCC-CCCcccCCCcCCEEEEcCCCCEEEChHHhcccCCCCCCCCCEEee---eEEEEEECCEEEEECCEEccCC
Confidence 99999994 5799999999999999998755332 245666665554 7899999999999999988643
No 65
>PRK09059 dihydroorotase; Validated
Probab=99.87 E-value=6.8e-21 Score=179.39 Aligned_cols=210 Identities=13% Similarity=0.129 Sum_probs=130.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHH------HHHhhcCCCCC-----hHHHHHH---hCCCCCCeeEEEeecC
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQ------VVMDTRKVDHG-----TVTFLDK---IEFLQNNLLSAHTVWV 182 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~H~~~~ 182 (363)
.+...+.++++.+++.|.++.+|+.+...... ......+.... .....+. ....+.+.++.|.+..
T Consensus 163 ~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~~~hi~hvs~~ 242 (429)
T PRK09059 163 ANTQVMRRALTYARDFDAVIVHETRDPDLGGNGVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRGRYHAAQISCA 242 (429)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEecCChhhhcCCCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEecCCH
Confidence 45667889999999999999999976542110 00001110000 1111111 1122334444443332
Q ss_pred ChhH-HHHHHhCC--CeEEEChhhhc-------------------cc-cCcccHHHHHHcCCeEEEecCCCCCCCCC---
Q 017968 183 NHTE-IGLLSRAG--VKVSHCPASAM-------------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNRM--- 236 (363)
Q Consensus 183 ~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~--- 236 (363)
..-+ +...++.| +++++||++-. |. .+...+++.+..|.+++++|||.|++...
T Consensus 243 ~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~i~sDh~p~~~~~K~~ 322 (429)
T PRK09059 243 ESAEALRRAKDRGLKVTAGVSINHLSLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRL 322 (429)
T ss_pred HHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhccCCccEEcCCCCCHHHHHHHHHHHHcCCCcEEEeCCCCCCHHHCcC
Confidence 2222 44445566 66678987632 11 22456788899999999999999984210
Q ss_pred cHHHHH--------HHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCC
Q 017968 237 SIVDEM--------YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 308 (363)
Q Consensus 237 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~ 308 (363)
+++... .+..++. . .....++++++++++|.||||++|+. +|+|++|++||||++|++..+
T Consensus 323 ~~~~~~~G~~gle~~l~~~~~-~--------v~~~~l~l~~~~~~~s~nPA~~~gl~--~G~l~~G~~ADlvl~d~~~~~ 391 (429)
T PRK09059 323 PFSEAAAGAIGLETLLAAALR-L--------YHNGEVPLLRLIEALSTRPAEIFGLP--AGTLKPGAPADIIVIDLDEPW 391 (429)
T ss_pred ChhhCCCCcccHHHHHHHHHH-H--------HHcCCCCHHHHHHHHhHHHHHHhCCC--cCcccCCCcCCEEEECCCCCE
Confidence 111111 1111111 1 11335899999999999999999994 599999999999999998754
Q ss_pred CC--------CcCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 309 MV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 309 ~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
.+ ..++|+.+..+.+ +|..||++|++||+
T Consensus 392 ~v~~~~~~s~~~~sPf~G~~l~G---~v~~ti~~G~~v~~ 428 (429)
T PRK09059 392 VVDPEDLKSRSKNTPFEEARFQG---RVVRTIVAGKTVYE 428 (429)
T ss_pred EECcccCccCCCCCCCCCCEEee---EEEEEEECCEEEee
Confidence 43 3356777776665 89999999999985
No 66
>PRK02382 dihydroorotase; Provisional
Probab=99.87 E-value=3.6e-20 Score=176.01 Aligned_cols=295 Identities=17% Similarity=0.159 Sum_probs=169.4
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCCcCC-----HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 90 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
..+++.+.++++ +++||||+++|+... .+.+.......+-+.+..+...- . . ....++.
T Consensus 70 ~~e~~~~~~~aa----~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~~-~---~--------~~~~~~l 133 (443)
T PRK02382 70 HKETWYTGSRSA----AAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGING-G---V--------TGNWDPL 133 (443)
T ss_pred chhhHHHHHHHH----HhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEEe-e---e--------ccchhhH
Confidence 447777777777 999999999986422 22222222222212222111110 0 0 0011223
Q ss_pred HHHHHHhcCCCCCCeEEEecc-CccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcC--------CCCChH
Q 017968 91 KELYAKHHHAADGRIRIWFGI-RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK--------VDHGTV 161 (363)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~--------~~~~~~ 161 (363)
.++.+. + ..+.-+++... ......+.+.+.++++.+++.|+++.+|+.+............| ......
T Consensus 134 ~~l~~~--g-v~~~gkv~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~g~~~~~~~~~~~p~~ 210 (443)
T PRK02382 134 ESLWER--G-VFALGEIFMADSTGGMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAKLLKGDADADAWSAYRPAA 210 (443)
T ss_pred HHHHhc--C-ccceeEEEEEecCCCcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHhhcCCCCHhhCCCcCCHH
Confidence 333322 1 11111444322 12234567889999999999999999999765432111111000 000000
Q ss_pred -------HHHHHhCCCCCCeeEEEeecCCh-hHHHHHHhCCCeEEEChhhhc-------------------cc-cCcccH
Q 017968 162 -------TFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPASAM-------------------RM-LGFAPI 213 (363)
Q Consensus 162 -------~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~g~~v~~~p~~~~-------------------~~-~~~~~~ 213 (363)
..+......+. ..|..|++. ..++.+++.++++++||++.. |. .+...+
T Consensus 211 ~E~~av~~~~~la~~~g~---~~hi~h~ss~~~~~~i~~~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL 287 (443)
T PRK02382 211 AEAAAVERALEVASETGA---RIHIAHISTPEGVDAARREGITCEVTPHHLFLSRRDWERLGTFGKMNPPLRSEKRREAL 287 (443)
T ss_pred HHHHHHHHHHHHHHHhCC---CEEEEECCCHHHHHHHHHCCcEEEEchhhhhcCHHHHhccCceEEEcCCCCChHHHHHH
Confidence 11111112232 356666665 446777776789999997531 11 223457
Q ss_pred HHHHHcCCeEEEecCCCCCCCC---CcHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhc
Q 017968 214 KEMLHADICVSLGTDGAPSNNR---MSIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 282 (363)
Q Consensus 214 ~~~l~~G~~~~lgTD~~~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~l 282 (363)
++.++.|.+++|+|||.|+... .+++. +..+..++. . ....+++++++++++|.|||+++
T Consensus 288 ~~~l~~g~i~~i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~~~~~-~--------~~~~~~~l~~~~~~~t~~pA~~~ 358 (443)
T PRK02382 288 WERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGVETMLPLLLA-A--------VRKNRLPLERVRDVTAANPARIF 358 (443)
T ss_pred HHHHhCCCCCEEEcCCCCCCHHHhcCChhhCCCCcccHHHHHHHHHH-H--------HHcCCCCHHHHHHHHhHHHHHHc
Confidence 7788899999999999997410 01111 111112221 1 12345999999999999999999
Q ss_pred cCCCCccccCCCCcccEEEEcCCCCCCCCc--------CChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 283 LWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 283 g~~~~~G~i~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
|++ ++|.|++|++|||+++|++..+..+. ++|+.... ...|.+||++|+++|++++++.
T Consensus 359 g~~-~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~s~~~~sp~~g~~----~~~v~~tiv~G~~v~~~~~~~~ 425 (443)
T PRK02382 359 GLD-GKGRIAEGYDADLVLVDPDAAREIRGDDLHSKAGWTPFEGME----GVFPELTMVRGTVVWDGDDINA 425 (443)
T ss_pred CCC-CCCccCCCCcCCEEEEcCCCcEEEcHHHhcccCCCCCcCCCE----eceEEEEEECCEEEEECCEEec
Confidence 995 67999999999999999876544322 23443321 1367899999999999998763
No 67
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=99.87 E-value=1.3e-20 Score=175.11 Aligned_cols=169 Identities=19% Similarity=0.181 Sum_probs=124.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCe
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 196 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 196 (363)
.+.+.++++++.|+++|+++.+|..+... .++...+.|+. +..| ..+.+.++.+++.|+.
T Consensus 211 ~~~e~i~~~v~~A~~~g~~v~sH~~~~~~--------------~i~~a~~~Gv~----~~e~--~~~~e~~~~~~~~g~~ 270 (383)
T PRK15446 211 YAPPNRRAIAALARARGIPLASHDDDTPE--------------HVAEAHALGVA----IAEF--PTTLEAARAARALGMS 270 (383)
T ss_pred cCHHHHHHHHHHHHHCCCceeecCCCCHH--------------HHHHHHHcCCc----eeeC--CCcHHHHHHHHHCCCE
Confidence 46788999999999999999999965443 23333444442 2333 3455667788888998
Q ss_pred EEEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 017968 197 VSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 273 (363)
Q Consensus 197 v~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 273 (363)
+..++...++. .+..+++++++.|+++++|||+.|+ +++..+... . ...++++++++++
T Consensus 271 v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~----~~~~~~~~~--~------------~~~gls~~~al~~ 332 (383)
T PRK15446 271 VLMGAPNVVRGGSHSGNVSALDLAAAGLLDILSSDYYPA----SLLDAAFRL--A------------DDGGLDLPQAVAL 332 (383)
T ss_pred EEeCCcccccCCcccchHhHHHHHHCCCcEEEEcCCChh----hHHHHHHHH--H------------HhcCCCHHHHHHH
Confidence 88776543442 4567889999999999999999764 233322211 1 1225899999999
Q ss_pred HHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 274 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 274 ~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+|.|||+++|+++ +|+|++|++|||+++|.+. ....+..||++|++|++.
T Consensus 333 ~T~npA~~lgl~~-~G~I~~G~~ADlvv~d~~~-----------------~~~~v~~v~~~G~~v~~~ 382 (383)
T PRK15446 333 VTANPARAAGLDD-RGEIAPGKRADLVRVRRAG-----------------GLPVVRAVWRGGRRVFLA 382 (383)
T ss_pred HhHHHHHHcCCCC-CcCcCCCCcCCEEEEcCCC-----------------CCcchheEEECCEEEEeC
Confidence 9999999999964 5999999999999999871 113788999999999865
No 68
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.87 E-value=1.5e-20 Score=168.83 Aligned_cols=163 Identities=18% Similarity=0.230 Sum_probs=122.0
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCe
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 196 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 196 (363)
.+.+.++++++.|++.|+++.+|.++.... ++...+.|.. +..|. .+.+.++.+++.|+.
T Consensus 160 ~~~~~~~~iv~~A~~~gl~vasH~d~~~~~--------------v~~a~~~Gv~----~~E~p--~t~e~a~~a~~~G~~ 219 (325)
T cd01306 160 YAPANRSELAALARARGIPLASHDDDTPEH--------------VAEAHELGVV----ISEFP--TTLEAAKAARELGLQ 219 (325)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEecCCChHH--------------HHHHHHCCCe----eccCC--CCHHHHHHHHHCCCE
Confidence 456889999999999999999999865432 2333333432 23342 567778899999999
Q ss_pred EEEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 017968 197 VSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 273 (363)
Q Consensus 197 v~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 273 (363)
+++++...++. .+..+++++++.|++++++||+.|+ +++...... .. ..++++++++++
T Consensus 220 vv~gapn~lrg~s~~g~~~~~~ll~~Gv~~al~SD~~p~----sll~~~~~l--a~------------~~gl~l~eAl~~ 281 (325)
T cd01306 220 TLMGAPNVVRGGSHSGNVSARELAAHGLLDILSSDYVPA----SLLHAAFRL--AD------------LGGWSLPEAVAL 281 (325)
T ss_pred EEecCcccccCccccccHhHHHHHHCCCeEEEEcCCCcH----hHHHHHHHH--HH------------HcCCCHHHHHHH
Confidence 99887654443 3567899999999999999999764 233322111 11 235899999999
Q ss_pred HHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEcc
Q 017968 274 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNG 335 (363)
Q Consensus 274 ~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G 335 (363)
+|.|||+++|++ ++|+|++|++||||++|.+. +...+..||++|
T Consensus 282 aT~nPA~~lGl~-d~G~I~~G~~ADlvvvd~~~-----------------~~p~v~~v~~~G 325 (325)
T cd01306 282 VSANPARAVGLT-DRGSIAPGKRADLILVDDMD-----------------GVPVVRTVWRGG 325 (325)
T ss_pred HhHHHHHHcCCC-CCCCcCCCCCCCEEEEeCCC-----------------CCCccceEEeCc
Confidence 999999999997 46999999999999999862 224778899887
No 69
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.87 E-value=7.1e-22 Score=181.56 Aligned_cols=258 Identities=28% Similarity=0.336 Sum_probs=169.9
Q ss_pred CCchhHHHHHHHHHHHHHhCCceEeecCCcCCHHHH----------HHHHHHcCCeE-EEecccccCCCCCCcccccCCh
Q 017968 15 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEM----------AKAVELLGLRA-CLVQSTMDCGEGLPASWAVRTT 83 (363)
Q Consensus 15 ~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~----------~~~~~~~gir~-~~~~~~~~~~~~~~~~~~~~~~ 83 (363)
+++++.+...+.+..+++++||||+++++..+.... ........... .+..... + ....+.....
T Consensus 22 ~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g--~~~~~~~~~~ 97 (333)
T PF01979_consen 22 LDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIELRNEIMEGLAAAPKIEPAMTLLGTGSV--G--GHGEGPNEPP 97 (333)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHHHHHHHHHHHHHHHHEEEEEEEEECEC--S--EEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCccccccccccccccccchhhhccccccccccc--c--cccccccccc
Confidence 568888999999999999999999999843222111 11111111111 1111111 0 0000000000
Q ss_pred H-----H---HHHHHHHHHHHhcCCCC--CCeEEEeccCccccCCHHHHHHHHHHHHH-----c-CCeeeEeccCChhhH
Q 017968 84 D-----D---CIQSQKELYAKHHHAAD--GRIRIWFGIRQIMNATDRLLLETRDMARE-----F-KTGIHMHVAEIPYEN 147 (363)
Q Consensus 84 ~-----~---~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-----~-g~~v~~H~~~~~~~~ 147 (363)
+ . ...+..+.+........ ..+...+.+......+.+.++..++.+++ . ++++++|+.+.....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 177 (333)
T PF01979_consen 98 DKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYTVSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEV 177 (333)
T ss_dssp HHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTTSCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHH
T ss_pred ccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccccchhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccc
Confidence 0 0 01122333333322110 13455566677778888989999999988 3 999999999987763
Q ss_pred HHHHhhcCCCCChHHHHHHhCCC-----CCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhcc----------------
Q 017968 148 QVVMDTRKVDHGTVTFLDKIEFL-----QNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR---------------- 206 (363)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~---------------- 206 (363)
....+.+ ...+++.+...+++ +...++.|+.++++++++++++.+..+..||.++..
T Consensus 178 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (333)
T PF01979_consen 178 EAMTHLY--GMSPIEALDHLGLLEEAIDDGVDLIAHGTHLSDEEIELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAE 255 (333)
T ss_dssp CCCHHHH--SHHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEHHHHHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBT
T ss_pred eeEeeee--eccchhhhccchhhhhhcccccceeeccccCCHHHhhhhhccCCccccccchhhhhccccccccccchhcc
Confidence 3333333 22466677777777 667889999999999999999999999999988765
Q ss_pred ----c-cCcccHHHHHHc-CCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHH
Q 017968 207 ----M-LGFAPIKEMLHA-DICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK 280 (363)
Q Consensus 207 ----~-~~~~~~~~~l~~-G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~ 280 (363)
+ ....++..++.. |+. +|||+.. ++++...... ++++++++|+|.||||
T Consensus 256 ~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~--------~~l~~~~~~~---------------~~~~~~l~~aT~n~Ak 310 (333)
T PF01979_consen 256 GIYGLGSGGAPLFRMLDKMGVN--LGTDGVA--------EELKLFVRLG---------------ISPEEALKMATINPAK 310 (333)
T ss_dssp SBSCTTHHHHHHHHHHHCTTHE--ETTCTTC--------HHHHHHHHHH---------------SHHHHHHHHHTHHHHH
T ss_pred ccccccccccchhhhhhhcccc--ccccccc--------cccccccccc---------------ccccccccccchhHHH
Confidence 2 234556677777 888 9999331 5555443221 7899999999999999
Q ss_pred hccCCCCccccCCCCcccEEEEc
Q 017968 281 SVLWDNDIGSLEAGKKADMVVVD 303 (363)
Q Consensus 281 ~lg~~~~~G~i~~G~~ADlvv~d 303 (363)
++|+++++|+|++||+|||||+|
T Consensus 311 ~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 311 ILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp HTTSTTTSSSSSTTSB--EEEEE
T ss_pred HcCCCCCEEEeCcCCCcCEEEeC
Confidence 99998889999999999999997
No 70
>PRK09237 dihydroorotase; Provisional
Probab=99.87 E-value=8e-20 Score=170.65 Aligned_cols=280 Identities=16% Similarity=0.141 Sum_probs=170.1
Q ss_pred HHHhCCceEeecCCc---CCHHHHHHHHHHc-CCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCe
Q 017968 30 ELIHSGVTCFAEAGG---QHVSEMAKAVELL-GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI 105 (363)
Q Consensus 30 ~~l~~GvTtv~d~~~---~~~~~~~~~~~~~-gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 105 (363)
.++.+||||+++++. .+.+.+.+..... +.+......+...+...+. ..........++..+++.++...-. .+
T Consensus 76 ~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~-gl 153 (380)
T PRK09237 76 VGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLLAQD-ELADLEDIDADAVAEAVKRNPDFIV-GI 153 (380)
T ss_pred HHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeecccccccc-hhcCHhHCCHHHHHHHHHhCcCcEE-EE
Confidence 359999999999763 4456666666655 7665433222211100011 1111111123444445544322111 12
Q ss_pred EEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCCh-
Q 017968 106 RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH- 184 (363)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~- 184 (363)
+.++..........+.++...+.+++.|+++.+|+.+.....+.. +. ++.+...+.||.+.++
T Consensus 154 k~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l-------------~~---~l~~g~~~~H~~~~~~~ 217 (380)
T PRK09237 154 KARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEI-------------LE---LLRPGDILTHCFNGKPN 217 (380)
T ss_pred EEEEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHH-------------Hh---hccCCCEEEecCCCCCC
Confidence 333322211111113445555666789999999997654322211 11 2222346799998876
Q ss_pred ----------hHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCC-eEEEecCCCCCC-CCCcHHHHHHHHHHHhccc
Q 017968 185 ----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSN-NRMSIVDEMYLASLINKGR 252 (363)
Q Consensus 185 ----------~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~-~~~lgTD~~~~~-~~~~~~~~~~~~~~~~~~~ 252 (363)
++...+.++|..+.+...+.. .......++++.|+ +.+++||..+.. ...+.+........+.
T Consensus 218 ~~~~~~~~~~~~a~~~l~~G~~~~ig~g~~~--~~~~~~~~l~~~g~~~~~l~tD~~~~~~~~~~~~~l~~~~~~~~--- 292 (380)
T PRK09237 218 RILDEDGELRPSVLEALERGVRLDVGHGTAS--FSFKVAEAAIAAGILPDTISTDIYCRNRINGPVYSLATVMSKFL--- 292 (380)
T ss_pred CccCCCCcchHHHHHHHHCCEEEEecCCCCc--ccHHHHHHHHHCCCCceEEECCCCCCCcccchHhHHHHHHHHHH---
Confidence 456667788998887643311 13455677888996 679999987642 1112222222211111
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEE
Q 017968 253 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVM 332 (363)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 332 (363)
..+++++++++++|.|||+++|+ +++|+|++|++|||++++.+... .+..|+...+++......|..|+
T Consensus 293 ---------~~g~~~~~al~~aT~n~A~~lgl-~~~G~l~~G~~ADlvv~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~ 361 (380)
T PRK09237 293 ---------ALGMPLEEVIAAVTKNAADALRL-PELGRLQVGSDADLTLFTLKDGP-FTLTDSEGDSLIGERLLTPLATV 361 (380)
T ss_pred ---------HhCCCHHHHHHHHHHHHHHHcCC-CCCCcCCCCCcCCEEEEeCCCCC-ccccCCCCCEEEecCCCcceEEE
Confidence 12589999999999999999999 46899999999999999987655 35678888888888888999999
Q ss_pred EccEEEEECCe
Q 017968 333 CNGQWVMKNKK 343 (363)
Q Consensus 333 ~~G~~v~~~~~ 343 (363)
++|++++.+-.
T Consensus 362 v~G~~~~~~~~ 372 (380)
T PRK09237 362 RGGKVVLTEQG 372 (380)
T ss_pred ECCEEEEccCc
Confidence 99999997644
No 71
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=99.87 E-value=9.6e-22 Score=173.91 Aligned_cols=321 Identities=13% Similarity=0.117 Sum_probs=195.4
Q ss_pred ccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCC-CcccccC
Q 017968 7 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGL-PASWAVR 81 (363)
Q Consensus 7 ~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~-~~~~~~~ 81 (363)
+..|+....+-+||+.++.+| +.+|+|.++||.. .++-+..+..++. .-...++|++... -..|..
T Consensus 75 lq~p~~G~ts~DdF~~GTkAA----laGGtTmiID~vlp~~~~slv~afe~wr~~----Ad~k~cCDyglhv~It~W~~- 145 (522)
T KOG2584|consen 75 LQMPFMGMTSVDDFFQGTKAA----LAGGTTMIIDFVLPDKGTSLVEAFEKWREW----ADPKVCCDYGLHVGITWWSP- 145 (522)
T ss_pred eccccCCccchhhhhcccHHH----hcCCceEEEEEecCCCCchHHHHHHHHHhh----cCCceeeeeeeeEeeeecCc-
Confidence 456889999999999999999 9999999999852 2222222221111 1122334443210 011221
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHh--hcCCCC-
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRKVDH- 158 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~--~~~~~~- 158 (363)
+.. ++..-+. +-+ +-...+++++-...+..+++++.+++..+++.|...++|+.....-.+...+ ..|...
T Consensus 146 ~v~---eem~~l~-~ek--GvnsF~~fmayk~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~gitgP 219 (522)
T KOG2584|consen 146 SVK---EEMEILV-KEK--GVNSFKFFMAYKDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLLELGITGP 219 (522)
T ss_pred chH---HHHHHHh-hhc--CcceEEeeeeeccccccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHcCCcCc
Confidence 111 2222222 212 2234566677777777889999999999999999999999776543333322 111110
Q ss_pred ------ChH-----HHHHH---hCCCCCCeeEEEeecCChhH-HHHHHhCCCeEEEChhhh-------------------
Q 017968 159 ------GTV-----TFLDK---IEFLQNNLLSAHTVWVNHTE-IGLLSRAGVKVSHCPASA------------------- 204 (363)
Q Consensus 159 ------~~~-----~~~~~---~~~~~~~~~~~H~~~~~~~~-~~~~~~~g~~v~~~p~~~------------------- 204 (363)
++. +..+. ....+-....+|..+.+..+ +...++.|..+--.|...
T Consensus 220 Egh~lSRPee~EaEA~~rai~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~ 299 (522)
T KOG2584|consen 220 EGHELSRPEELEAEATNRAITIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAA 299 (522)
T ss_pred ccccccCchhhhHHHHHHHHHHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcce
Confidence 111 11222 22333456788988888755 555555454333333221
Q ss_pred ------ccc--cCcccHHHHHHcCCeEEEecCCCCCCCC------CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 017968 205 ------MRM--LGFAPIKEMLHADICVSLGTDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDPAALPAETV 270 (363)
Q Consensus 205 ------~~~--~~~~~~~~~l~~G~~~~lgTD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (363)
++. ....-+..+|..|..-..||||++.+.. .|+.........++-.-..+++-.+....+++.+.
T Consensus 300 ~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~f 379 (522)
T KOG2584|consen 300 FVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRF 379 (522)
T ss_pred eeeCCCCCCCCCCHHHHHHHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccE
Confidence 111 1224578899999999999999987521 11111111101111111112222233456888899
Q ss_pred HHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcC--------ChhhhhhccccCCCccEEEEccEEEEECC
Q 017968 271 LRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH--------DRITSLVYCMRTENVVSVMCNGQWVMKNK 342 (363)
Q Consensus 271 l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~--------~~~~~~~~~~~~~~v~~v~~~G~~v~~~~ 342 (363)
+.-.+.|.||++++.++||+|++|++||+||+|++.-..++.+ +.++++..++ .++.||.+||+||++|
T Consensus 380 VavtstnaAkifnlYprKGrIavGsDADiVIwdp~at~tIS~~th~~~~d~NifEGm~~~G---~plvtIsrGriv~eng 456 (522)
T KOG2584|consen 380 VAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPNATKTISAKTHHSANDFNIFEGMTVHG---VPLVTISRGRVVYENG 456 (522)
T ss_pred EEEecccchhheeccCcCceecccCCCcEEEECCCcceEeccccccccccceeecCcEecc---eeEEEEeCCeEEEecC
Confidence 9999999999999999999999999999999999976555433 3455555554 8899999999999998
Q ss_pred eec
Q 017968 343 KIL 345 (363)
Q Consensus 343 ~~~ 345 (363)
.+.
T Consensus 457 ~~~ 459 (522)
T KOG2584|consen 457 NLV 459 (522)
T ss_pred cEE
Confidence 864
No 72
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=99.87 E-value=2.3e-20 Score=170.95 Aligned_cols=248 Identities=19% Similarity=0.199 Sum_probs=151.0
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCCcC-----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 90 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
..||+.+++++| +++||||+++|... +.+.+....+...-..+.-+...-. ... ...+.+.
T Consensus 22 ~~e~~~t~t~aA----~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~---~~~-------~~~~~el 87 (337)
T cd01302 22 YKEDFESGSRAA----AAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSYVDFSFHAG---IGP-------GDVTDEL 87 (337)
T ss_pred chhHHHHHHHHH----HhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcEeeEEEEEe---ccC-------ccCHHHH
Confidence 578999999999 99999999999642 2333333333332222221111110 000 0112333
Q ss_pred HHHHHHhcCCCCCCeEEEeccCcc--ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhC
Q 017968 91 KELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 168 (363)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (363)
.++.+. +...++++...... ...+.+.+.++++.+++.|.++.+|+. ......+..+
T Consensus 88 ~~l~~~----Gv~g~K~f~~~~~~~~~~~~~~~l~~~~~~~~~~g~~v~~H~E-----------------r~~~la~~~g 146 (337)
T cd01302 88 KKLFDA----GINSLKVFMNYYFGELFDVDDGTLMRTFLEIASRGGPVMVHAE-----------------RAAQLAEEAG 146 (337)
T ss_pred HHHHHc----CCcEEEEEEeccCCCccccCHHHHHHHHHHHHhcCCeEEEeHH-----------------HHHHHHHHhC
Confidence 333221 22345665532221 145678888999999999999999997 1333334433
Q ss_pred CCCCCeeEEEeecCCh-hHHHHHHhCC--CeEEEChhhhc-------------------cc-cCcccHHHHHHcCCeEEE
Q 017968 169 FLQNNLLSAHTVWVNH-TEIGLLSRAG--VKVSHCPASAM-------------------RM-LGFAPIKEMLHADICVSL 225 (363)
Q Consensus 169 ~~~~~~~~~H~~~~~~-~~~~~~~~~g--~~v~~~p~~~~-------------------~~-~~~~~~~~~l~~G~~~~l 225 (363)
.+.++.|.+.... +.++.+++.| +++++||++-. |. .+...++++++.|.++++
T Consensus 147 ---~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i 223 (337)
T cd01302 147 ---ANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTI 223 (337)
T ss_pred ---CcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEE
Confidence 2455666553333 2244555555 56678887631 11 234678889999999999
Q ss_pred ecCCCCCCCCC-----cHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccC
Q 017968 226 GTDGAPSNNRM-----SIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 292 (363)
Q Consensus 226 gTD~~~~~~~~-----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~ 292 (363)
+|||.|++... +++. +..+..++.... ..+++++++++++|.|||+++|+.+ +|+|+
T Consensus 224 ~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~~~~~~---------~~~i~~~~~~~~~s~~pA~~~gl~~-~g~i~ 293 (337)
T cd01302 224 ASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPILLTEGV---------KRGLSLETLVEILSENPARIFGLYP-KGTIA 293 (337)
T ss_pred ecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHHHHHHH---------hcCCCHHHHHHHHHHHHHHHcCCCC-CCccc
Confidence 99999874210 1111 122222222211 2358999999999999999999964 69999
Q ss_pred CCCcccEEEEcCCCCCCCC
Q 017968 293 AGKKADMVVVDPFSWPMVP 311 (363)
Q Consensus 293 ~G~~ADlvv~d~~~~~~~~ 311 (363)
+|++|||+++|++..+.+.
T Consensus 294 ~G~~ADlvi~d~~~~~~v~ 312 (337)
T cd01302 294 VGYDADLVIVDPKKEWKVT 312 (337)
T ss_pred cCCcCCEEEEeCCCcEEEc
Confidence 9999999999998755443
No 73
>PRK06886 hypothetical protein; Validated
Probab=99.87 E-value=8.2e-20 Score=164.50 Aligned_cols=240 Identities=18% Similarity=0.155 Sum_probs=171.1
Q ss_pred CcCCCCchhHHHHHHHHHHHHHhCCceEeecC-------CcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCh
Q 017968 11 YESNMTEEDSYISTLLCGIELIHSGVTCFAEA-------GGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT 83 (363)
Q Consensus 11 ~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~-------~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~ 83 (363)
.+..+|.||++.++..++..++.+|||.++-+ +..+++.+.+..++..-+.-+....+- ++|+- ....
T Consensus 58 ~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~~~~a~~~~r~~~~~~idlq~vafP-q~g~~----~~~~ 132 (329)
T PRK06886 58 VKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDRAIIAAHKAREVYKHDIILKFANQT-LKGVI----EPTA 132 (329)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCccccHHHHHHHHHHHhcCcceEEEEecC-hhhcc----CccH
Confidence 45667999999999999999999999988643 235577888888877766655444331 11211 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEeccCc---cccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCCh
Q 017968 84 DDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 160 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~ 160 (363)
.+.+.+. .+. .+.+.- + |+. ....+.+.++.++++|+++|+++++|+++...+.....+. .
T Consensus 133 ~~l~~~a---l~~-----advvGG-i-P~~~~~~~~~~~e~l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~------l 196 (329)
T PRK06886 133 KKWFDIG---SEM-----VDMIGG-L-PYRDELDYGRGLEAMDILLDTAKSLGKMVHVHVDQFNTPKEKETEQ------L 196 (329)
T ss_pred HHHHHHH---HHh-----CCEEeC-c-cCCcCCCCCCCHHHHHHHHHHHHHcCCCeEEeECCCCchhHHHHHH------H
Confidence 1111111 111 122221 1 333 1346688999999999999999999999876544333221 2
Q ss_pred HHHHHHhCCCCCCeeEEEeecCChhH-------HHHHHhCCCeEEEChhhhcc---------c-cCcccHHHHHHcCCeE
Q 017968 161 VTFLDKIEFLQNNLLSAHTVWVNHTE-------IGLLSRAGVKVSHCPASAMR---------M-LGFAPIKEMLHADICV 223 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~~H~~~~~~~~-------~~~~~~~g~~v~~~p~~~~~---------~-~~~~~~~~~l~~G~~~ 223 (363)
.+...+.|+.+ +++++||++++..+ ++++++.|+.|++||.+|+. . ++..|+.+++++|+++
T Consensus 197 ~~~~~~~Gl~g-rV~~sH~~~L~~~~~~~~~~~i~~La~agi~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V 275 (329)
T PRK06886 197 CDKTIEHGMQG-RVVAIHGISIGAHSKEYRYRLYQKMREADMMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITV 275 (329)
T ss_pred HHHHHHcCCCC-CEEEEEeccccCcChhhHHHHHHHHHHcCCeEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeE
Confidence 22334678876 69999999999765 89999999999999998752 2 6789999999999999
Q ss_pred EEecCCCCC----CCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 224 SLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 224 ~lgTD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
++|||+... ..+.|+++.++.+....+. .++.++++|+|.|+|+++|++
T Consensus 276 ~lGtDnv~D~~~p~g~~Dmle~~~l~~~~~~~-------------~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 276 ALGTDNICDYMVPLCEGDMWQELSLLAAGCRF-------------YDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred EEecCCCcccCCCCCCCCHHHHHHHHHHHcCC-------------CCHHHHHHHHhhhHHHHhCCC
Confidence 999998631 2357999999887655432 358999999999999999984
No 74
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=99.86 E-value=3.1e-20 Score=171.21 Aligned_cols=282 Identities=16% Similarity=0.123 Sum_probs=160.6
Q ss_pred CCchhHHHHHHHHHHHHHhCCceEeecCCcCC-----HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHH
Q 017968 15 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 89 (363)
Q Consensus 15 ~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (363)
-..||+.+++++| +++||||+++|.... .+.+........-..+.-+..... +. .. ++
T Consensus 21 ~~~ed~~s~t~aA----~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~---~~-------~~---~~ 83 (361)
T cd01318 21 TYKEDFVSGSRAA----AAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSVVDYGLYFG---VT-------GS---ED 83 (361)
T ss_pred CccCcHHHHHHHH----HcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCceeEEEEEEe---ec-------Ch---hh
Confidence 3578999999999 999999999997422 232222222211111111111100 00 00 12
Q ss_pred HHHHHHHhcCCCCCCeEEEeccCc-cccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHh--hcC--CCCC--h--
Q 017968 90 QKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRK--VDHG--T-- 160 (363)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~--~~~--~~~~--~-- 160 (363)
..++.+.. ...++++..... ....+...+.++++.+. .++.+|+.+.......... ..+ .... .
T Consensus 84 l~~~~~~~----~~g~k~f~~~~~~~~~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~P~~aE 156 (361)
T cd01318 84 LEELDKAP----PAGYKIFMGDSTGDLLDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESAHPRIRDAEAA 156 (361)
T ss_pred HHHHHHhh----CcEEEEEEecCCCCcCCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccCCCCcCCHHHH
Confidence 22322211 123555543211 11256778888887775 7899999775431111110 000 0000 0
Q ss_pred -HH---HHHHhCCCCCCeeEEEeecCChhHHHHHHhC--CCeEEEChhhhc-------------------cc-cCcccHH
Q 017968 161 -VT---FLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GVKVSHCPASAM-------------------RM-LGFAPIK 214 (363)
Q Consensus 161 -~~---~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~--g~~v~~~p~~~~-------------------~~-~~~~~~~ 214 (363)
.. .+.-....+.+.++.|.+.. +.++++++. ++++++||.+-. |. .+...++
T Consensus 157 ~~av~r~~~la~~~~~~~hi~Hvs~~--~~~~~i~~~k~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~ 234 (361)
T cd01318 157 AVATARALKLARRHGARLHICHVSTP--EELKLIKKAKPGVTVEVTPHHLFLDVEDYDRLGTLGKVNPPLRSREDRKALL 234 (361)
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCCCH--HHHHHHHHhCCCeEEEeCHHHhhcCHHHHhcCCCeEEEeCCCCCHHHHHHHH
Confidence 00 11111123445555554443 346666665 899999997631 11 2234577
Q ss_pred HHHHcCCeEEEecCCCCCCCC---CcHH--------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhcc
Q 017968 215 EMLHADICVSLGTDGAPSNNR---MSIV--------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 283 (363)
Q Consensus 215 ~~l~~G~~~~lgTD~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg 283 (363)
+++++|.+++++|||.|+... .+++ .+..+..+.. . ....+++++++++++|.|||+++|
T Consensus 235 ~~l~~G~id~i~SDh~P~~~~~k~~~~~~a~~G~~g~e~~l~~~~~-~--------v~~~~l~l~~a~~~~t~nPA~~lg 305 (361)
T cd01318 235 QALADGRIDVIASDHAPHTLEEKRKGYPAAPSGIPGVETALPLMLT-L--------VNKGILSLSRVVRLTSHNPARIFG 305 (361)
T ss_pred HHHhCCCCCEEeeCCCCCCHHHccCChhhCCCCCccHHHHHHHHHH-H--------HHcCCCCHHHHHHHHhHHHHHHhC
Confidence 789999999999999987421 0000 0111111111 0 112358999999999999999999
Q ss_pred CCCCccccCCCCcccEEEEcCCCCCCCC--------cCChhhhhhccccCCCccEEEEcc
Q 017968 284 WDNDIGSLEAGKKADMVVVDPFSWPMVP--------VHDRITSLVYCMRTENVVSVMCNG 335 (363)
Q Consensus 284 ~~~~~G~i~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~~~~~~~~~v~~v~~~G 335 (363)
+++ +|.|++|++|||+++|++..+.++ .++|+.+..+.+ +|..||++|
T Consensus 306 l~~-~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~tp~~G~~l~G---~v~~t~~~G 361 (361)
T cd01318 306 IKN-KGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPFEGFEVTG---FPVMTIVRG 361 (361)
T ss_pred CCC-CCccCCCCcCCEEEEeCCCCEEECHHHccccCCCCCCCCCEEee---EEEEEEeCc
Confidence 964 799999999999999998765433 346777776665 888888887
No 75
>PRK04250 dihydroorotase; Provisional
Probab=99.85 E-value=4.8e-20 Score=171.82 Aligned_cols=153 Identities=14% Similarity=0.175 Sum_probs=105.3
Q ss_pred EEeecCChh-HHHHHHhCC---CeEEEChhhhcc------------------c-cCcccHHHHHHcCCeEEEecCCCCCC
Q 017968 177 AHTVWVNHT-EIGLLSRAG---VKVSHCPASAMR------------------M-LGFAPIKEMLHADICVSLGTDGAPSN 233 (363)
Q Consensus 177 ~H~~~~~~~-~~~~~~~~g---~~v~~~p~~~~~------------------~-~~~~~~~~~l~~G~~~~lgTD~~~~~ 233 (363)
.|.+|+|.. .++.+++.| +++++||++-.. . .+...+++++. .+++++|||.|+.
T Consensus 200 lhi~HvSt~~~~~~i~~~g~~~vt~Ev~ph~L~l~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~--~Id~i~sDHaP~~ 277 (398)
T PRK04250 200 LHICHISTKDGLKLILKSNLPWVSFEVTPHHLFLTRKDYERNPLLKVYPPLRSEEDRKALWENFS--KIPIIASDHAPHT 277 (398)
T ss_pred EEEEeCCCHHHHHHHHHcCCCcEEEEeCHHHhccCHHHHCCCCceEEcCCCCCHHHHHHHHHhhc--cCCEEEcCCcccC
Confidence 466666653 366666665 688899977421 1 22345666664 3999999999973
Q ss_pred --------CCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCC
Q 017968 234 --------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 305 (363)
Q Consensus 234 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~ 305 (363)
.+..-++.. +..++. . .....++++++++++|.|||+++|++ ++| |++|++|||++||++
T Consensus 278 ~~~k~~~~~G~~g~e~~-lpl~~~-~--------v~~~~lsl~~~v~~~t~npAk~lgl~-~~G-L~~G~~ADlvi~D~~ 345 (398)
T PRK04250 278 LEDKEAGAAGIPGLETE-VPLLLD-A--------ANKGMISLFDIVEKMHDNPARIFGIK-NYG-IEEGNYANFAVFDMK 345 (398)
T ss_pred HHHhhcCCCCcchHHHH-HHHHHH-H--------HHhcCCCHHHHHHHHHHHHHHHhCCC-CcC-ccCCCcCCEEEEcCC
Confidence 122222222 222222 1 12345999999999999999999995 579 999999999999998
Q ss_pred CCCCCCc--------CChhhhhhccccCCCccEEEEccEEEEECCeecc
Q 017968 306 SWPMVPV--------HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 346 (363)
Q Consensus 306 ~~~~~~~--------~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~ 346 (363)
..+..+. ++|+.+..+.+ +|.+||++|++||++|++++
T Consensus 346 ~~~~v~~~~~~s~~~~sp~~g~~l~g---~v~~tiv~G~~v~~~g~~~~ 391 (398)
T PRK04250 346 KEWTIKAEELYTKAGWTPYEGFKLKG---KVIMTILRGEVVMEDDEIIG 391 (398)
T ss_pred CcEEEChhhccccCCCCCCCCCEEee---EEEEEEECCEEEEECCEEcC
Confidence 7654443 24454444443 78999999999999998864
No 76
>PRK07369 dihydroorotase; Provisional
Probab=99.85 E-value=1.8e-20 Score=175.86 Aligned_cols=282 Identities=13% Similarity=0.099 Sum_probs=158.2
Q ss_pred CCchhHHHHHHHHHHHHHhCCceEeecCCcC-----CHHHHHHHHHH---c-CCeEEEecccccCCCCCCcccccCChHH
Q 017968 15 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVEL---L-GLRACLVQSTMDCGEGLPASWAVRTTDD 85 (363)
Q Consensus 15 ~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~---~-gir~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (363)
...||+.+.++++ +++||||+++|+.. ..+.+....+. . .+... .++.+..+ ....
T Consensus 72 ~~~e~~~s~~~aa----~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~----------~~~~ 136 (418)
T PRK07369 72 EERETLASLAAAA----AAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLH-FWGALTLG----------GQGK 136 (418)
T ss_pred CCCccHHHHHHHH----HhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEE-EEEEEeeC----------CCCc
Confidence 3568999999988 99999999999742 22322222222 1 12222 22222111 0111
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHH------HhhcCCCCC
Q 017968 86 CIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV------MDTRKVDHG 159 (363)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~------~~~~~~~~~ 159 (363)
.+.++.++.+. |.+. +.. .....+...+.++++.+++.|.++.+|+.+........ ....+....
T Consensus 137 ~~~ei~~l~~~------Gv~~--f~~-~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~g~~~~~~~~~~~ 207 (418)
T PRK07369 137 QLTELAELAAA------GVVG--FTD-GQPLENLALLRRLLEYLKPLGKPVALWPCDRSLAGNGVMREGLLALRLGLPGD 207 (418)
T ss_pred cHhhHHHHHHC------CCEE--EEC-CCcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhcCcccCChhHHHhCCCCC
Confidence 12333333221 2222 221 22234567888999999999999999997654311000 001111100
Q ss_pred -h-HH------HHHHhCCCCCCeeEEEeecCChhH-HHHHHhCC--CeEEEChhhhc-------------------cc-c
Q 017968 160 -T-VT------FLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVSHCPASAM-------------------RM-L 208 (363)
Q Consensus 160 -~-~~------~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~g--~~v~~~p~~~~-------------------~~-~ 208 (363)
. .+ .+.-....+.+.++.|.+....-+ ++..++.| +++++||++-. |. .
T Consensus 208 p~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~~~~~~kv~PPLR~~~ 287 (418)
T PRK07369 208 PASAETTALAALLELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALASYDPNLRLDPPLGNPS 287 (418)
T ss_pred CHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhccCCCcEECCCCCCHH
Confidence 0 00 111112224445444443322222 34445554 77789997642 11 2
Q ss_pred CcccHHHHHHcCCeEEEecCCCCCCCC---CcHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHH
Q 017968 209 GFAPIKEMLHADICVSLGTDGAPSNNR---MSIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 277 (363)
Q Consensus 209 ~~~~~~~~l~~G~~~~lgTD~~~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~ 277 (363)
+...+++++..|.+++++|||+|+... .+++. +..+..++... ....+++++++++++|.|
T Consensus 288 d~~aL~~~l~~G~Id~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~--------v~~~~i~l~~~v~~~s~n 359 (418)
T PRK07369 288 DRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNL--------VETGELSALQLWQALSTN 359 (418)
T ss_pred HHHHHHHHHhcCCCCEEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHH--------HHcCCCCHHHHHHHHHHh
Confidence 345788899999999999999998521 11111 11122222211 113358999999999999
Q ss_pred HHHhccCCCCccccCCCCcccEEEEcCCCCCCCC--------cCChhhhhhccccCCCccEEEE
Q 017968 278 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP--------VHDRITSLVYCMRTENVVSVMC 333 (363)
Q Consensus 278 pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~~~~~~~~~v~~v~~ 333 (363)
||++||++ .|.|++|++|||+++|++..+.+. .++|+.+..+.+ +|..||+
T Consensus 360 PA~~lgl~--~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G---~v~~t~~ 418 (418)
T PRK07369 360 PARCLGQE--PPSLAPGQPAELILFDPQKTWTVSAQTLHSLSRNTPWLGQTLKG---RVLQTWV 418 (418)
T ss_pred HHHHhCCC--cCcccCCCcCCEEEEcCCCCEEECcccccCCCCCCCCCCCEeee---EEEEEEC
Confidence 99999995 499999999999999998755443 345666655554 6666653
No 77
>PRK09358 adenosine deaminase; Provisional
Probab=99.85 E-value=1.8e-19 Score=165.57 Aligned_cols=240 Identities=17% Similarity=0.138 Sum_probs=170.6
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEe---ecCCc-----CC--------HHHHHHHHHHcCCeEEEec
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEAGG-----QH--------VSEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv---~d~~~-----~~--------~~~~~~~~~~~gir~~~~~ 65 (363)
+||+.+.|+.....|++|++..++.++.++++.|||++ +++.. .. .+.+.++.++.|++..+..
T Consensus 61 ~~l~~~~~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~~~gi~~~li~ 140 (340)
T PRK09358 61 SFLDKYDAGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEAEFGISVRLIL 140 (340)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHHhcCceEEEEE
Confidence 78999999999999999999999999999999999985 34321 11 2344566677899988877
Q ss_pred ccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChh
Q 017968 66 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 145 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~ 145 (363)
+.++.. +.+........+++.+. ..+.+.+.+... ....+.+.+.++++.|++.|+++++|++|...
T Consensus 141 ~~~r~~----------~~~~~~~~~~~~~~~~~--~~~vvg~~l~g~-e~~~~~~~~~~~~~~A~~~g~~~~~H~~E~~~ 207 (340)
T PRK09358 141 CFMRHF----------GEEAAARELEALAARYR--DDGVVGFDLAGD-ELGFPPSKFARAFDRARDAGLRLTAHAGEAGG 207 (340)
T ss_pred EecCCC----------CHHHHHHHHHHHHHHhc--CCcEEEEeCCCc-CCCCCHHHHHHHHHHHHHCCCCeEEcCCCCCc
Confidence 766421 12223333444444432 233444433211 12356788999999999999999999998643
Q ss_pred hHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC--hhHHHHHHhCCCeEEEChhhhccc-c----CcccHHHHHH
Q 017968 146 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-L----GFAPIKEMLH 218 (363)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~v~~~p~~~~~~-~----~~~~~~~~l~ 218 (363)
..+ ....++..| .. .+.||.+++ ++.++++++.|+.+++||++|+.+ . +..|++++++
T Consensus 208 ~~~-----------~~~al~~lg---~~-ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~~~~~~~~~pi~~l~~ 272 (340)
T PRK09358 208 PES-----------IWEALDELG---AE-RIGHGVRAIEDPALMARLADRRIPLEVCPTSNVQTGAVPSLAEHPLKTLLD 272 (340)
T ss_pred hhH-----------HHHHHHHcC---Cc-ccchhhhhccCHHHHHHHHHcCCeEEECCCccccccccCCcccChHHHHHH
Confidence 211 112222233 22 369999996 456999999999999999999877 3 5689999999
Q ss_pred cCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 219 ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 219 ~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
+|+++++|||.++.. +.+++++++.+.... ++++++ +..++.|+.+...++
T Consensus 273 ~Gv~v~lgTD~~~~~-~~~l~~e~~~~~~~~--------------~l~~~e-l~~l~~nai~~sf~~ 323 (340)
T PRK09358 273 AGVRVTINTDDPLVF-GTTLTEEYEALAEAF--------------GLSDED-LAQLARNALEAAFLS 323 (340)
T ss_pred CCCEEEECCCCCccc-CCCHHHHHHHHHHHh--------------CCCHHH-HHHHHHHHHHHHCCC
Confidence 999999999987654 358999988765321 488999 466678998876654
No 78
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=99.84 E-value=2.1e-19 Score=164.09 Aligned_cols=238 Identities=18% Similarity=0.196 Sum_probs=170.3
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCC--cC-------C--------HHHHHHHHHHcCCeEEEe
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQ-------H--------VSEMAKAVELLGLRACLV 64 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~--~~-------~--------~~~~~~~~~~~gir~~~~ 64 (363)
+|++.++|++....++++++..++.++.++++.||| ++++. +. + .+.+.++.++.|++..+.
T Consensus 52 ~~l~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi~~~li 130 (324)
T TIGR01430 52 DFLAKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGIKSRLI 130 (324)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 699999999999999999999999999999999995 55432 11 1 124556677889998777
Q ss_pred cccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCCh
Q 017968 65 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 144 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 144 (363)
.+.++.. .. ....+..+....+.. ...+.+.+... ....+.+.+.++++.|++.|+++++|++|..
T Consensus 131 ~~~~r~~----------~~-~~~~~~~~~~~~~~~--~~vvg~~l~~~-e~~~~~~~~~~~~~~A~~~g~~i~~Ha~E~~ 196 (324)
T TIGR01430 131 LCGMRHK----------QP-EAAEETLELAKPYKE--QTIVGFGLAGD-ERGGPPPDFVRAFAIARELGLHLTVHAGELG 196 (324)
T ss_pred EEEeCCC----------CH-HHHHHHHHHHHhhcc--CcEEEecCCCC-CCCCCHHHHHHHHHHHHHCCCCeEEecCCCC
Confidence 6666421 11 223333333333321 12333333322 2245688999999999999999999999863
Q ss_pred hhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecC--ChhHHHHHHhCCCeEEEChhhhcccc---C--cccHHHHH
Q 017968 145 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRML---G--FAPIKEML 217 (363)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~~g~~v~~~p~~~~~~~---~--~~~~~~~l 217 (363)
...+ ....+...|. ..+.|+.++ ++++++.++++|+.+++||.+|+.+. + ..|+++++
T Consensus 197 ~~~~-----------~~~~~~~~g~----~ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~~~~~~~~~pi~~l~ 261 (324)
T TIGR01430 197 GPES-----------VREALDDLGA----TRIGHGVRALEDPELLKRLAQENITLEVCPTSNVALGVVKSLAEHPLRRFL 261 (324)
T ss_pred ChHH-----------HHHHHHHcCc----hhcchhhhhccCHHHHHHHHHcCceEEECCcccccccccCCcccChHHHHH
Confidence 2111 1122223333 247999999 55689999999999999999998762 3 78999999
Q ss_pred HcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 218 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 218 ~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
++|+++++|||.+.... .++..++..+... .++++.+ +..+|.|+++...++
T Consensus 262 ~~Gv~v~igTD~~~~~~-~~l~~e~~~a~~~--------------~~l~~~e-l~~~~~na~~~~f~~ 313 (324)
T TIGR01430 262 EAGVKVTLNSDDPAYFG-SYLTEEYEIAAKH--------------AGLTEEE-LKQLARNALEGSFLS 313 (324)
T ss_pred HCCCEEEECCCCCcccC-CCHHHHHHHHHHH--------------cCCCHHH-HHHHHHHHHHHhCCC
Confidence 99999999999876543 3888888876532 2488999 889999999988764
No 79
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.84 E-value=8.7e-19 Score=162.33 Aligned_cols=167 Identities=20% Similarity=0.240 Sum_probs=122.4
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeE
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 197 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v 197 (363)
+.+.++++++.|+++|+++.+|..+.... +......|+ ....| .++.+..+.+++.|+.+
T Consensus 207 ~~e~i~~~v~~A~~~G~~v~sH~~~~~e~--------------i~~a~~~Gv----~~~E~--~~t~e~a~~~~~~G~~v 266 (376)
T TIGR02318 207 GLANRSEIAALARARGIPLASHDDDTPEH--------------VAEAHDLGV----TISEF--PTTLEAAKEARSLGMQI 266 (376)
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCCCHHH--------------HHHHHHCCC----Chhcc--CCCHHHHHHHHHcCCeE
Confidence 46888999999999999999999765542 223333343 22344 36777788888999998
Q ss_pred EEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 017968 198 SHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 274 (363)
Q Consensus 198 ~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 274 (363)
..|.....+. .+..+++++++.|++++++|||.|+. ++..+.... . ...++++.++++++
T Consensus 267 ~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~l~SD~~p~~----~l~~~~~~~--~-----------~~~gl~~~~al~~~ 329 (376)
T TIGR02318 267 LMGAPNIVRGGSHSGNLSARELAHEGLLDVLASDYVPAS----LLLAAFQLA--D-----------DVEGIPLPQAVKMV 329 (376)
T ss_pred EECCccccccccccchHHHHHHHHCCCcEEEEcCCCcHH----HHHHHHHHH--H-----------hhcCCCHHHHHHHH
Confidence 8774322232 34678999999999999999997642 222221110 0 11248999999999
Q ss_pred HHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEE
Q 017968 275 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 339 (363)
Q Consensus 275 T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~ 339 (363)
|.|||+++|++ ++|+|++|++|||+++|... ....+..||++|++||
T Consensus 330 T~npA~~lgl~-~~G~I~~G~~ADlvvvd~~~-----------------~~~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 330 TKNPARAVGLS-DRGSIAPGKRADLVRVHRVD-----------------GVPRIRAVWRAGRRVY 376 (376)
T ss_pred hHHHHHHcCCC-CCCcCCCCCcccEEEEcCCC-----------------CCccceEEEECCEEeC
Confidence 99999999996 57999999999999999841 1137889999999885
No 80
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.84 E-value=6.4e-19 Score=161.17 Aligned_cols=238 Identities=18% Similarity=0.170 Sum_probs=167.9
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCC--c-------CC--------HHHHHHHHHHcCCeEEEe
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--G-------QH--------VSEMAKAVELLGLRACLV 64 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~--~-------~~--------~~~~~~~~~~~gir~~~~ 64 (363)
+|++.+.|+....++++|++..++.++.++++.|||++ ++. + .. .+.+.++.++.|++..+.
T Consensus 53 ~~l~~~~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~-E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~gi~~~l~ 131 (325)
T cd01320 53 DFLAKYDFGLSVLQTEEDFERLAYEYLEDAAADGVVYA-EIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEFGIKARLI 131 (325)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEE-EEEeCchhhccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 68888889999889999999999999999999999965 321 1 11 234455566779998776
Q ss_pred cccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCCh
Q 017968 65 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 144 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 144 (363)
.+..... + .....+..+++.++.. +..+++.+..... ..+.+.+..+++.|++.|+++++|+.+..
T Consensus 132 ~~~~~~~---~--------~~~~~~~~~~~~~~~~--~~vvg~~l~~~~~-~~~~~~~~~~~~~A~~~g~~v~~H~~E~~ 197 (325)
T cd01320 132 LCGLRHL---S--------PESAQETLELALKYRD--KGVVGFDLAGDEV-GFPPEKFVRAFQRAREAGLRLTAHAGEAG 197 (325)
T ss_pred EEecCCC---C--------HHHHHHHHHHHHhccC--CCEEEeecCCCCC-CCCHHHHHHHHHHHHHCCCceEEeCCCCC
Confidence 6544311 1 1223444444444432 2344544443322 23778999999999999999999998864
Q ss_pred hhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC--hhHHHHHHhCCCeEEEChhhhccc-c----CcccHHHHH
Q 017968 145 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-L----GFAPIKEML 217 (363)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~v~~~p~~~~~~-~----~~~~~~~~l 217 (363)
.... ....++..|. ..+.|+.+++ +++++++++.|+.+++||.+|+.+ . ...|+++++
T Consensus 198 ~~~~-----------~~~a~~~~g~----~~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l~~~~~~~~~p~~~l~ 262 (325)
T cd01320 198 GPES-----------VRDALDLLGA----ERIGHGIRAIEDPELVKRLAERNIPLEVCPTSNVQTGAVKSLAEHPLRELL 262 (325)
T ss_pred CHHH-----------HHHHHHHcCC----cccchhhccCccHHHHHHHHHcCCeEEECCCccccccccCCcccChHHHHH
Confidence 3211 1122222332 2478999995 557999999999999999999876 2 268999999
Q ss_pred HcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 218 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 218 ~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
+.|+++++|||.++.+ ..+++.++..+... .++++.+ +..+|.|+++...+.
T Consensus 263 ~~Gv~v~lgTD~~~~~-~~~~~~e~~~~~~~--------------~~l~~~e-l~~~~~na~~~~f~~ 314 (325)
T cd01320 263 DAGVKVTINTDDPTVF-GTYLTDEYELLAEA--------------FGLTEEE-LKKLARNAVEASFLS 314 (325)
T ss_pred HCCCEEEECCCCCccc-CCCHHHHHHHHHHH--------------cCCCHHH-HHHHHHHHHHHhCCC
Confidence 9999999999987653 35788888776432 1488999 566889999987664
No 81
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.82 E-value=1.1e-17 Score=156.79 Aligned_cols=264 Identities=20% Similarity=0.233 Sum_probs=155.5
Q ss_pred HHHHHHhCCceEeecCCc-----CCH---HHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhc
Q 017968 27 CGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 98 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~-----~~~---~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (363)
++.+++++|+||++||.. ... ....+++.+.|++.+.....++.. .. ...+.+......++.+.
T Consensus 80 ~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~~~----~~----~~~~~~~~~~~~i~~~~ 151 (387)
T cd01308 80 TLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYEVP----TR----TITGSIRKDLLLIDKVI 151 (387)
T ss_pred HHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCC----Cc----CchhhHHHHHHHHHHhc
Confidence 456779999999999862 122 355677788999999876655422 11 11222222223344443
Q ss_pred CCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCC------eeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCC
Q 017968 99 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 172 (363)
Q Consensus 99 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (363)
+ .+ ...+..+.........+.++.+.++..+. .+++|..+.....+. ..+.+++.|.--.
T Consensus 152 ~--~g--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~~~~~~~----------i~~~~~~~G~~~~ 217 (387)
T cd01308 152 G--VG--EIAISDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDGKRALSP----------IFELIEETEIPIT 217 (387)
T ss_pred C--cc--eEEEcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchHHHHH----------HHHHHHhcCCCcc
Confidence 2 11 22223333345566777888888876443 478888755322221 2233344343111
Q ss_pred CeeEEEeecCChh---HHHHHHhCCCeEEEChhhhcc-c-----cCcccHHHHHHcCC---eEEEecCCCCC---CC--C
Q 017968 173 NLLSAHTVWVNHT---EIGLLSRAGVKVSHCPASAMR-M-----LGFAPIKEMLHADI---CVSLGTDGAPS---NN--R 235 (363)
Q Consensus 173 ~~~~~H~~~~~~~---~~~~~~~~g~~v~~~p~~~~~-~-----~~~~~~~~~l~~G~---~~~lgTD~~~~---~~--~ 235 (363)
+.+..|+. .+.+ +.....+.|..+.+.-..... . .....++.++++|+ .++++||+... .. +
T Consensus 218 ~~~~~~~~-~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g 296 (387)
T cd01308 218 QFLPTHIN-RTAPLFEQGVEFAKMGGTIDLTSSIDPQFRKEGEVRPSEALKRLLEQGVPLERITFSSDGNGSLPKFDENG 296 (387)
T ss_pred eeECCccc-CCHHHHHHHHHHHHcCCcEEEECCCCccccccCccChHHHHHHHHHhCCCCCcEEEEECCCCCcccCccCC
Confidence 22233332 3333 122344566655544322111 1 13456678899986 36999997421 10 0
Q ss_pred ------C----cHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCC
Q 017968 236 ------M----SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 305 (363)
Q Consensus 236 ------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~ 305 (363)
. .++..+..+ . ...+++++++++++|.|||+++|+++ +|+|++|++|||+++|++
T Consensus 297 ~~~~~g~~~~~~~~~~~~~~--v------------~~~~i~~~~al~~~T~npA~~lg~~~-~G~i~~G~~ADlvv~d~~ 361 (387)
T cd01308 297 NLVGLGVGSVDTLLREVREA--V------------KCGDIPLEVALRVITSNVARILKLRK-KGEIQPGFDADLVILDKD 361 (387)
T ss_pred eEEecCcCcHHHHHHHHHHH--H------------HhCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcCCEEEEcCC
Confidence 0 011111111 1 12248999999999999999999964 799999999999999986
Q ss_pred CCCCCCcCChhhhhhccccCCCccEEEEccEEEEECCeecccC
Q 017968 306 SWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLM 348 (363)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~~~d 348 (363)
.++..|+++|++++++|+++..|
T Consensus 362 --------------------~~~~~~~~~G~~v~~~~~~~~~~ 384 (387)
T cd01308 362 --------------------LDINSVIAKGQIMVRNGKLLVKG 384 (387)
T ss_pred --------------------CCEEEEEECCEEEEECCeEeecc
Confidence 37899999999999999987543
No 82
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=99.82 E-value=5e-19 Score=164.72 Aligned_cols=165 Identities=17% Similarity=0.164 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEE
Q 017968 120 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 199 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~ 199 (363)
..+.+++++|+++|++++++........+ .+...++.|+.....+..|..+++++++.. .+....+
T Consensus 172 ~~v~~~~~la~~~~~~i~i~h~ss~~~l~-----------~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~---~~~~~k~ 237 (374)
T cd01317 172 IMVARDLELAEATGARVHFQHLSTARSLE-----------LIRKAKAKGLPVTAEVTPHHLLLDDEALES---YDTNAKV 237 (374)
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCHHHHH-----------HHHHHHHCCCCEEEEecHHHHhcCHHHHhc---cCCceEE
Confidence 36678889999999999884433432222 233344445554445667888888877543 4666777
Q ss_pred Chhhhccc-cCcccHHHHHHcCCeEEEecCCCCCCCCCcH--HH---------HHHHHHHHhcccccccCCCCCCCCCCH
Q 017968 200 CPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI--VD---------EMYLASLINKGREVFANGTTDPAALPA 267 (363)
Q Consensus 200 ~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (363)
+|.. +. .+..++++++++|+++++||||+|++...+. +. ++.+..++.... ....+++
T Consensus 238 ~Ppl--r~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~--------~~~~~~~ 307 (374)
T cd01317 238 NPPL--RSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLV--------KGGLLTL 307 (374)
T ss_pred cCCC--CCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHH--------HcCCCCH
Confidence 8833 33 4689999999999999999999998532111 11 333333333221 1234899
Q ss_pred HHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC
Q 017968 268 ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 310 (363)
Q Consensus 268 ~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~ 310 (363)
+++++|+|.|||+++|++ + |.|++|++|||+++|++..+.+
T Consensus 308 ~~~~~~~t~npA~~lgl~-~-G~l~~G~~ADlvi~d~~~~~~~ 348 (374)
T cd01317 308 PDLIRALSTNPAKILGLP-P-GRLEVGAPADLVLFDPDAEWIV 348 (374)
T ss_pred HHHHHHHHHHHHHHhCCC-C-CcccCCCcCCEEEECCCCCEEE
Confidence 999999999999999995 3 9999999999999999875544
No 83
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.81 E-value=4.8e-18 Score=151.23 Aligned_cols=235 Identities=25% Similarity=0.327 Sum_probs=168.6
Q ss_pred cCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC--------CHHHHHHHHHHc-CCeEEEecccccCCCCCCcccccCC
Q 017968 12 ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELL-GLRACLVQSTMDCGEGLPASWAVRT 82 (363)
Q Consensus 12 ~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~-gir~~~~~~~~~~~~~~~~~~~~~~ 82 (363)
....++++++......+.+++++||||++++... ..+...+++.+. |++.+...+..+... ..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---- 96 (275)
T cd01292 25 AEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAGIRVVLGLGIPGVPA----AV---- 96 (275)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhcCeeeEEeccCCCCcc----cc----
Confidence 4678999999999999999999999999987532 356778888888 889887776654321 00
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccC---CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCC
Q 017968 83 TDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA---TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 159 (363)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~ 159 (363)
.....+...+.+..... .+. .+++.+..... +.+.++++++.|+++|+++++|+.+.... ..
T Consensus 97 ~~~~~~~~~~~i~~~~~--~~~--~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~H~~~~~~~-----------~~ 161 (275)
T cd01292 97 DEDAEALLLELLRRGLE--LGA--VGLKLAGPYTATGLSDESLRRVLEEARKLGLPVVIHAGELPDP-----------TR 161 (275)
T ss_pred chhHHHHHHHHHHHHHh--cCC--eeEeeCCCCCCCCCCcHHHHHHHHHHHHcCCeEEEeeCCcccC-----------cc
Confidence 11222233333333322 112 22334433333 78899999999999999999999876532 01
Q ss_pred hHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccc----cCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 160 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM----LGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~----~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
....+.+....+.+.++.|+.+.++++++.+++.|+.+++||.++... ....++.++++.|+++++|||+++.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~ 241 (275)
T cd01292 162 ALEDLVALLRLGGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYLLGRDGEGAEALRRLLELGIRVTLGTDGPPHPLG 241 (275)
T ss_pred CHHHHHHHHhcCCCEEEECCccCCHHHHHHHHHcCCeEEECCcccccccCCcCCcccHHHHHHCCCcEEEecCCCCCCCC
Confidence 222222222225678999999999999999999999999999987653 5578899999999999999999875334
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 281 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~ 281 (363)
.+++..++.+....+. +++..++++++|.|||++
T Consensus 242 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 242 TDLLALLRLLLKVLRL------------GLSLEEALRLATINPARA 275 (275)
T ss_pred CCHHHHHHHHHHHHhc------------CCCHHHHHHHHhccccCC
Confidence 5788888776544321 278999999999999974
No 84
>PRK09061 D-glutamate deacylase; Validated
Probab=99.81 E-value=1.5e-17 Score=159.75 Aligned_cols=217 Identities=18% Similarity=0.157 Sum_probs=131.6
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEeccCChh-----hHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCCh-----
Q 017968 115 MNATDRLLLETRDMAREFKTGIHMHVAEIPY-----ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH----- 184 (363)
Q Consensus 115 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----- 184 (363)
+..+.+.+.++++.|+++|.++.+|+.+... +..... ..++..+.. +.+.+++|+.....
T Consensus 194 p~~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~~~~~e~~av~-------~~i~lA~~~---G~rv~IsHlss~g~~~~~~ 263 (509)
T PRK09061 194 PGTGHKEYLELARLAARAGVPTYTHVRYLSNVDPRSSVDAYQ-------ELIAAAAET---GAHMHICHVNSTSLRDIDR 263 (509)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEEecCcccCCchhHHHHHH-------HHHHHHHHh---CCCEEEEeeccCCcccHHH
Confidence 4568899999999999999999999986532 111111 123333333 44677888776432
Q ss_pred --hHHHHHHhCCC--eEEEChhh-----------hc--------------------cccC--------------------
Q 017968 185 --TEIGLLSRAGV--KVSHCPAS-----------AM--------------------RMLG-------------------- 209 (363)
Q Consensus 185 --~~~~~~~~~g~--~v~~~p~~-----------~~--------------------~~~~-------------------- 209 (363)
+.++.+++.|+ +.++||.+ +. +++.
T Consensus 264 ~le~I~~Ar~~Gi~Vt~e~~P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~ 343 (509)
T PRK09061 264 CLALVEKAQAQGLDVTTEAYPYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHF 343 (509)
T ss_pred HHHHHHHHHHcCCcEEEEecCcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEe
Confidence 22556666664 44677766 10 0001
Q ss_pred --------cccHHHHHHcCCeEEEecCCCCCCCC------------C-cHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 017968 210 --------FAPIKEMLHADICVSLGTDGAPSNNR------------M-SIVDEMYLASLINKGREVFANGTTDPAALPAE 268 (363)
Q Consensus 210 --------~~~~~~~l~~G~~~~lgTD~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (363)
...+++.+..|.. +++|||.|+... . ....+++.+..+.+....+ ......++++
T Consensus 344 ~~~~~~~~~~~l~~~l~~p~~-~i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~---v~~~~~isl~ 419 (509)
T PRK09061 344 LDEDNPRDRALLDRSVLFPGA-AIASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREY---VRERKALSLL 419 (509)
T ss_pred ccCCCCccchhHHHHhCCCCc-eEecCCccccccccccccccccccccCCCCCchhhcchHHHHHHH---HhhcccCCHH
Confidence 2225556667766 999999764210 0 1111111111111110000 0012349999
Q ss_pred HHHHHHHHHHHHhcc-----CCCCccccCCCCcccEEEEcCCCCCCCC-cCChhhhhhccccCCCccEEEEccEEEEECC
Q 017968 269 TVLRMATINGAKSVL-----WDNDIGSLEAGKKADMVVVDPFSWPMVP-VHDRITSLVYCMRTENVVSVMCNGQWVMKNK 342 (363)
Q Consensus 269 ~~l~~~T~~pA~~lg-----~~~~~G~i~~G~~ADlvv~d~~~~~~~~-~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~ 342 (363)
++++++|.+||++|| +++ .|+|++|+.|||||||++.....+ ..++. .....|.+||++|+++|++|
T Consensus 420 ~ai~~~T~~pA~~lg~~~~~l~~-~G~i~~G~~ADlvv~D~~~~~~~~~~~~~~------~~~~gi~~v~v~G~~v~~~g 492 (509)
T PRK09061 420 EAIRKCTLMPAQILEDSVPAMRR-KGRLQAGADADIVVFDPETITDRATFEDPN------RPSEGVRHVLVNGVPVVSNG 492 (509)
T ss_pred HHHHHHHHHHHHHhccccccccC-CEeeCCCCCcCEEEEchhhccccccccccC------CCCCCceEEEECCEEEEECC
Confidence 999999999999999 853 699999999999999988532221 11221 11235899999999999999
Q ss_pred eec-ccCHHHH
Q 017968 343 KIL-LLMRGRL 352 (363)
Q Consensus 343 ~~~-~~d~~~~ 352 (363)
+++ +.-..++
T Consensus 493 ~~~~~~~~G~~ 503 (509)
T PRK09061 493 ELVRDARPGRP 503 (509)
T ss_pred EecCCCCCCeE
Confidence 975 4444443
No 85
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.79 E-value=7.5e-19 Score=150.68 Aligned_cols=164 Identities=15% Similarity=0.146 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhH-HHHHHhCCCeEE
Q 017968 120 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVKVS 198 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~g~~v~ 198 (363)
.....+...|++.|+.+..|-+.+....+.. ...| ..+ .-+.+..+ .+..++.|..|.
T Consensus 210 ~~r~~i~~~c~~rgI~lASHDDaT~~hV~es--------------~~~G-----v~i--AEFPtT~eAA~asr~~Gm~Vl 268 (377)
T COG3454 210 PNRQAIAALCRERGIALASHDDATVEHVAES--------------HGLG-----VAI--AEFPTTVEAAKASRELGMQVL 268 (377)
T ss_pred chHHHHHHHHHHcCCceecCCcCcHHHHHHH--------------HhcC-----eeE--EeCccHHHHHHHHHHhCchhh
Confidence 3455677888888888888887544322211 1111 111 22333333 444556677766
Q ss_pred EChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHH
Q 017968 199 HCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 275 (363)
Q Consensus 199 ~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T 275 (363)
..-..-.+. +|.-...++.+.|+.++++||..|. .++...+...-. ...+++.+|++|+|
T Consensus 269 MGAPNivrGgSHsGNvsA~ela~~glLDiLsSDY~P~----SLl~A~F~La~~-------------~~~~~lpqAvalvt 331 (377)
T COG3454 269 MGAPNIVRGGSHSGNVSARELAQHGLLDILSSDYVPA----SLLHAAFRLADL-------------GSNISLPQAVALVT 331 (377)
T ss_pred cCCCceeccCCcccchhHHHHHhCCceeeecccCCcH----HHHHHHHHHhhh-------------hcccCHHHHHHHhc
Confidence 654443333 5667789999999999999999876 255544332211 12368999999999
Q ss_pred HHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEE
Q 017968 276 INGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 339 (363)
Q Consensus 276 ~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~ 339 (363)
.|||+++|+.| .|+|++|++||||.+..+ ++...|..||+.|+.|+
T Consensus 332 ~nPA~algl~D-RG~Ia~GlrADlv~v~~~-----------------~~vp~ir~vwr~G~rv~ 377 (377)
T COG3454 332 KNPARALGLTD-RGRIAPGLRADLVRVRRD-----------------GGVPVIRTVWRAGKRVA 377 (377)
T ss_pred cCHHHhcCCCc-ccccccccccceEEEecC-----------------CCCceeeeeeecceecC
Confidence 99999999985 599999999999988776 23357899999999764
No 86
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=99.78 E-value=5.2e-17 Score=154.26 Aligned_cols=119 Identities=17% Similarity=0.144 Sum_probs=89.5
Q ss_pred cCcccHHHHHHcCCeEEEecCCCCCC-CCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCC
Q 017968 208 LGFAPIKEMLHADICVSLGTDGAPSN-NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 286 (363)
Q Consensus 208 ~~~~~~~~~l~~G~~~~lgTD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~ 286 (363)
..+.+.+.++++|+++++|||++... ...+++..++.+...+..+............+++.++|++.|.|||+++|+++
T Consensus 345 e~~~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~~iq~Av~rk~~~g~l~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~ 424 (572)
T PRK13309 345 ETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRAIQTADAMKAARGKLPEDAAGNDNFRVLRYVAKITINPAITQGVSH 424 (572)
T ss_pred hhhcchhHHHhCCCEEEEcCCCCcccCCcccHHHHHHHHHHHHhccCCCCccCCCcccccHHHHHHHHhHHHHHHcCccc
Confidence 34578888999999999999997531 23567877777664432221111110113458899999999999999999998
Q ss_pred CccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC-Ce
Q 017968 287 DIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN-KK 343 (363)
Q Consensus 287 ~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~-~~ 343 (363)
++|+|++|+.|||||+|++.+. .++..||++|+++|.. |.
T Consensus 425 ~~GsLe~Gk~ADlvvld~d~f~-----------------~~~~~vi~~G~iv~~~~gd 465 (572)
T PRK13309 425 VIGSVEVGKMADLVLWEPRFFG-----------------AKPKMVIKGGMINWAAMGD 465 (572)
T ss_pred CccccCCCCcCCEEEEchhhcC-----------------CCccEEEECCEEEEecCCC
Confidence 9999999999999999976321 3678999999999986 44
No 87
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.78 E-value=7.5e-18 Score=155.72 Aligned_cols=172 Identities=20% Similarity=0.169 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEC
Q 017968 121 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 200 (363)
Q Consensus 121 ~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~ 200 (363)
.++.+...++.. +++.+|+..... .. ..++..++.++ +.++.|+... ...++.+++.|+.++++
T Consensus 181 ~l~~l~~~~~~~-~~v~vHa~~~~~-i~----------~~l~~~~e~g~---~~~i~H~~~~-~~~~~~la~~gv~v~~~ 244 (359)
T cd01309 181 KLEALLPVLKGE-IPVRIHAHRADD-IL----------TAIRIAKEFGI---KITIEHGAEG-YKLADELAKHGIPVIYG 244 (359)
T ss_pred cHHHHHHHHcCC-eeEEEEeCCHHH-HH----------HHHHHHHHcCC---CEEEECchhH-HHHHHHHHHcCCCEEEC
Confidence 455666665543 899999975332 22 13444555554 4788999877 77789999999999999
Q ss_pred hhhhccc------cCcccHHHHHHcC-CeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 017968 201 PASAMRM------LGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 273 (363)
Q Consensus 201 p~~~~~~------~~~~~~~~~l~~G-~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 273 (363)
|..+.+. .+..+..++.++| ++++++||++..+. ..+......+ . ..++++++++++
T Consensus 245 P~~~~~~~~~~~~~~~~~~~~l~~aGGv~valgsD~~~~~~-~~l~~~~~~a---~------------~~gl~~~~al~~ 308 (359)
T cd01309 245 PTLTLPKKVEEVNDAIDTNAYLLKKGGVAFAISSDHPVLNI-RNLNLEAAKA---V------------KYGLSYEEALKA 308 (359)
T ss_pred ccccccccHHHhhcchhhHHHHHHcCCceEEEECCCCCccc-hhHHHHHHHH---H------------HcCCCHHHHHHH
Confidence 9875432 3567888999998 99999999965321 1222222211 1 124889999999
Q ss_pred HHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEE
Q 017968 274 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 339 (363)
Q Consensus 274 ~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~ 339 (363)
+|.|||+++|+++++|+|++|++||||++|.+++.. ..+|..||++|+++|
T Consensus 309 ~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl~~---------------~~~v~~v~i~G~~v~ 359 (359)
T cd01309 309 ITINPAKILGIEDRVGSLEPGKDADLVVWNGDPLEP---------------TSKPEQVYIDGRLVY 359 (359)
T ss_pred HHHHHHHHhCCCCCcccCCCCCccCEEEECCCcccc---------------cCcccEEEECCEEeC
Confidence 999999999998778999999999999999873321 148999999999885
No 88
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.77 E-value=6.3e-17 Score=151.69 Aligned_cols=202 Identities=18% Similarity=0.184 Sum_probs=123.0
Q ss_pred eccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHH-HHHHhCCCCCCeeEEEeecCChhH-
Q 017968 109 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVNHTE- 186 (363)
Q Consensus 109 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~- 186 (363)
+..+..+..++..+.+++++|+++++++.+|+...... ..++ .++. ..+...+..|.....-.+
T Consensus 217 fK~~ed~g~t~~~I~~aL~vA~~~dv~V~iHtdtlne~------------g~~E~t~aa--~~gr~iH~~H~egagggha 282 (568)
T PRK13985 217 FKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEA------------GCVEDTMAA--IAGRTMHTFHTEGAGGGHA 282 (568)
T ss_pred EEECCccCCCHHHHHHHHHHHHHcCCEEEEeCCCCCCc------------hhhHHHHHH--hcCCeEEEEeccCCCccch
Confidence 33444446788999999999999999999999754421 1222 2222 234445555544333211
Q ss_pred HHHHHhCC---Ce-EEEChhhh---------------------------------ccccCcccHHHHHHcCCeEEEecCC
Q 017968 187 IGLLSRAG---VK-VSHCPASA---------------------------------MRMLGFAPIKEMLHADICVSLGTDG 229 (363)
Q Consensus 187 ~~~~~~~g---~~-v~~~p~~~---------------------------------~~~~~~~~~~~~l~~G~~~~lgTD~ 229 (363)
-++++-.| +. -+++|+.. .|...+.+-.-+.+.|++.+++||.
T Consensus 283 pdi~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs 362 (568)
T PRK13985 283 PDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDS 362 (568)
T ss_pred hhHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccc
Confidence 22222222 21 11222111 0001112223366789999999998
Q ss_pred CCCCC-CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCC
Q 017968 230 APSNN-RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 308 (363)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~ 308 (363)
...+. +--.....+.+....+.+..+........+++++++|+++|.|||+++|+++++|+|++||.|||||+|++.+.
T Consensus 363 ~~mgr~ge~~~r~~q~a~k~~~~~g~l~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~ 442 (568)
T PRK13985 363 QAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFG 442 (568)
T ss_pred hhhCcccceeeehHHHHHHHHHhcCCCCCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCC
Confidence 75432 11122223333333332322222222245699999999999999999999888999999999999999987432
Q ss_pred CCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 309 MVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.++..||++|+++|..
T Consensus 443 -----------------~~pe~vi~~G~iv~~~ 458 (568)
T PRK13985 443 -----------------VKPNMIIKGGFIALSQ 458 (568)
T ss_pred -----------------CChheEEECCEEEEcc
Confidence 3778999999999974
No 89
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.76 E-value=8.6e-17 Score=151.81 Aligned_cols=256 Identities=21% Similarity=0.184 Sum_probs=155.9
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCCc--C----CHHHHHHHHHHcC--CeEEEec---ccccCCCCCCcccccCChH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAGG--Q----HVSEMAKAVELLG--LRACLVQ---STMDCGEGLPASWAVRTTD 84 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~~--~----~~~~~~~~~~~~g--ir~~~~~---~~~~~~~~~~~~~~~~~~~ 84 (363)
+.++.....+.+..++.+.||||+.++.. . ..+...+...+.+ +|..... .+-...+|.+ ...
T Consensus 124 ~~~~~~~~l~~~~~~~~a~GiTt~~d~~~~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~vk~~~dg~~------~~~ 197 (404)
T PF07969_consen 124 ELEEMREALREAAMAAGAYGITTVLDYGGGFASDPEDLEALRELAAEGGLPLRVHLYPRIGGVKIFADGSP------GGR 197 (404)
T ss_dssp HHHHHHHHHHHHHHHHCHTCEEEETTCECCCGEHHHHHHHHHHHHHCTC--SEEEEEEEEEEEEEESSSST------THH
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEecCCccccCCCHHHHHHHHHHhhhcCCCeeeeeecccCceeecccccc------ccc
Confidence 44555555566689999999999999871 1 1233334444444 3443322 1101111111 011
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHH
Q 017968 85 DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 164 (363)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
..........+.. + . ....+.....+++.+.++++.|.+.|+++++|+..+..... ..+.+
T Consensus 198 ~a~~~~~~~~~~~-g-----~--~~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~-----------~l~a~ 258 (404)
T PF07969_consen 198 TALLEEPYYADEP-G-----A--PVHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDE-----------ALDAI 258 (404)
T ss_dssp HHHHHHHHHHHHH-T-----S--EEEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHH-----------HHHHH
T ss_pred hhhhccccccCcc-c-----c--cccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHh-----------HHHHH
Confidence 1111111111111 0 0 12223444567777999999999999999999965543222 22333
Q ss_pred HHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhh--------------ccccCcccHHHHHHcCCeEEEecCCC
Q 017968 165 DKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASA--------------MRMLGFAPIKEMLHADICVSLGTDGA 230 (363)
Q Consensus 165 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~--------------~~~~~~~~~~~~l~~G~~~~lgTD~~ 230 (363)
+..... ..+.|+...++++++++++.++.+.+.|..- .+.....+++.+++.|+++++|||++
T Consensus 259 ~~~~~~---~~i~h~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gsD~p 335 (404)
T PF07969_consen 259 EAARAR---GRIEHAELIDPDDIERMAELGVTASVQPHFLFSWGGEWYEERLGPERARRIYPIRSLLDAGVRVALGSDAP 335 (404)
T ss_dssp HHHTCC---HEEEEHCBCCHHHHHHHHHHTTEEEECCTHHHHETEETHHHHHHHHCGGGBTHHHHHHHCTTEEEE--TTT
T ss_pred Hhhccc---ceeeccccCCHHHHHHHHHhCCccccChhHhhhccchhhhhhhhhHHHHHHhHHHHHHhccCceecCcCCc
Confidence 333221 1689999999999999999999999999210 11245688999999999999999987
Q ss_pred CCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEE
Q 017968 231 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 301 (363)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv 301 (363)
.. ..+++..+..+...................+|++++++++|.|||+++|+++++|+|++|+.|||||
T Consensus 336 ~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 336 VS--PPNPFRGIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp TS--SCCHHHHHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred cc--ccCcchhhhhhhccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence 53 2567776666554433220000001112569999999999999999999998889999999999997
No 90
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.76 E-value=1.1e-16 Score=151.86 Aligned_cols=206 Identities=16% Similarity=0.110 Sum_probs=124.5
Q ss_pred EEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhh---HHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC
Q 017968 107 IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 183 (363)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 183 (363)
++++++..+.++++.+++++++|+++|+++++|+ ++..+ .+...+.++. ++++.+...|+-+. |.
T Consensus 214 ~gfK~h~~y~~s~e~L~~al~~A~e~gv~V~iH~-ET~~E~g~ve~t~~a~g~--rpIh~~H~~G~g~g-----ha---- 281 (567)
T TIGR01792 214 CGLKVHEDWGATPAAIDNALSVADEYDVQVAVHT-DTLNESGFVEDTIAAFKG--RTIHTYHTEGAGGG-----HA---- 281 (567)
T ss_pred cEEEeCCCCCCCHHHHHHHHHHHHHcCCEEEEeC-CCcccchHHHHHHHHHCC--CcchhHhhcCCCCC-----cH----
Confidence 3466777778999999999999999999999999 77776 5555555544 46666666665431 10
Q ss_pred hhHHHHHHhCCC---------------------eEEEChhhhc-------------cccCcccHHHHHHcCCeEEEecCC
Q 017968 184 HTEIGLLSRAGV---------------------KVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDG 229 (363)
Q Consensus 184 ~~~~~~~~~~g~---------------------~v~~~p~~~~-------------~~~~~~~~~~~l~~G~~~~lgTD~ 229 (363)
++-++.+...++ .+-+|.+-+. |...+.+-.-+.+.|++.+++||.
T Consensus 282 pdi~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~~~~h~l~~~~~~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs 361 (567)
T TIGR01792 282 PDIIVVVGYNNILPSSTNPTLPYTVNTIDEHLDMLMVCHHLNPKIPEDVAFAESRIRKETIAAEDVLQDMGAISMISSDS 361 (567)
T ss_pred HHHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEEeccCCCCCcccchhhhhhccceeccccchhhhCCcEEEecCCc
Confidence 000111111111 1112222211 111223334467789999999999
Q ss_pred CCCCC-CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCC
Q 017968 230 APSNN-RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 308 (363)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~ 308 (363)
.+.+. +.-.....+.+....+.+..+...........+...|+++|.|||+++|+++++|+|++||.|||||++++.+.
T Consensus 362 ~~mgr~~~~~~r~~q~a~k~~~~~g~~~~~~~~~~~~rl~r~L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f~ 441 (567)
T TIGR01792 362 QAMGRIGEVVTRCWQTADKMKKQRGPLPGDSPGNDNNRVKRYVAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFFG 441 (567)
T ss_pred hhhCcccceeechHHHHHHHHHhcCCCcccccCChhhhHHHHHHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCcccC
Confidence 75421 11112222223222222221111110001112223399999999999999988999999999999999987322
Q ss_pred CCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 309 MVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.++..||++|++++..
T Consensus 442 -----------------~~p~~v~~~G~i~~~~ 457 (567)
T TIGR01792 442 -----------------VKPDMVLKGGLIAWAI 457 (567)
T ss_pred -----------------CChheEEECCEEEEEe
Confidence 3678999999999865
No 91
>PLN02303 urease
Probab=99.76 E-value=5e-17 Score=157.91 Aligned_cols=213 Identities=15% Similarity=0.095 Sum_probs=133.6
Q ss_pred eccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhh---HHHHHhhcCCCCChHHHHHHhCCCCCCe-----eEEEee
Q 017968 109 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNL-----LSAHTV 180 (363)
Q Consensus 109 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~H~~ 180 (363)
+.++..+..+++.+.+++++|+++|+++++|+. +..+ .+...+.++. +++++++..|++|.+- ++.+-+
T Consensus 486 fK~h~d~gvTpelL~raLe~AkelGVpVaIHAE-dLnE~G~vE~t~~a~G~--RpIh~~h~~Ga~gghapdi~~~~~~~n 562 (837)
T PLN02303 486 LKLHEDWGTTPAAIDNCLDVAEEYDIQVTIHTD-TLNESGCVEHSIAAFKG--RTIHTYHSEGAGGGHAPDIIKVCGVKN 562 (837)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHcCCEEEEecC-cccccchHHHHHHHHCC--ChHHHHHhcCCCCCCCcHHHHhcCCCC
Confidence 445555567899999999999999999999964 4544 5666667765 6999999999987431 111111
Q ss_pred cCC----h---hHHHHHHhCCCeEEEChhhhc-------------cccCcccHHHHHHcCCeEEEecCCCCCCC-CCcHH
Q 017968 181 WVN----H---TEIGLLSRAGVKVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIV 239 (363)
Q Consensus 181 ~~~----~---~~~~~~~~~g~~v~~~p~~~~-------------~~~~~~~~~~~l~~G~~~~lgTD~~~~~~-~~~~~ 239 (363)
-+. | -...-+.+.==.+-+|.+-+. |...+.+-.-+.+.|++.+++||....+. +.-+.
T Consensus 563 vlpsstnpt~p~t~nt~~e~~dm~m~~h~l~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge~i~ 642 (837)
T PLN02303 563 VLPSSTNPTRPYTKNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVIT 642 (837)
T ss_pred ccCCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCcccceee
Confidence 000 0 000000000001222322221 11122233346678999999999875432 11122
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhh
Q 017968 240 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSL 319 (363)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~ 319 (363)
...+.+......+..+........+++.+++|+.+|.|||+++|+++++|+|++||.|||||++++.+.
T Consensus 643 r~~q~A~k~~~~~g~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~fg----------- 711 (837)
T PLN02303 643 RTWQTAHKMKSQRGALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFFG----------- 711 (837)
T ss_pred ehHHHHHHHHHhcCCCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEecccccC-----------
Confidence 222333333222222222222335689999999999999999999999999999999999999975221
Q ss_pred hccccCCCccEEEEccEEEEEC
Q 017968 320 VYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 320 ~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.++..||++|+++|..
T Consensus 712 ------~~~~~vi~~G~ivy~~ 727 (837)
T PLN02303 712 ------AKPEMVIKGGQIAWAQ 727 (837)
T ss_pred ------CCeeEEEECCEEEEcc
Confidence 4789999999999975
No 92
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.75 E-value=2e-16 Score=149.52 Aligned_cols=195 Identities=18% Similarity=0.164 Sum_probs=120.6
Q ss_pred ccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCCh---hH-HH
Q 017968 113 QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---TE-IG 188 (363)
Q Consensus 113 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---~~-~~ 188 (363)
..+..+++.+.++++.|+++|+++.+|+...... ...+. ......+...+..|.....- .+ ++
T Consensus 227 ~d~g~t~~~i~~aL~~A~~~gv~V~iHadtlne~------------g~~E~-t~aa~~gr~iH~~H~egaggghapd~~~ 293 (573)
T PRK13206 227 EDWGSTPAAIDACLRVADAAGVQVALHSDTLNEA------------GFVED-TLAAIAGRSIHAYHTEGAGGGHAPDIIT 293 (573)
T ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEECCCcccc------------chhhH-HHHHhcCCeEEEEeccCCCcCcccHHHH
Confidence 3345788999999999999999999999754321 12222 11223344455555444332 12 22
Q ss_pred HHHhCCCe-EEEChhhh---------------------------------ccccCcccHHHHHHcCCeEEEecCCCCCCC
Q 017968 189 LLSRAGVK-VSHCPASA---------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNN 234 (363)
Q Consensus 189 ~~~~~g~~-v~~~p~~~---------------------------------~~~~~~~~~~~~l~~G~~~~lgTD~~~~~~ 234 (363)
.+-..++. -+++|+.. .|...+.+-..+++.|++.++|||.+..+.
T Consensus 294 ~~~~~n~lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~ 373 (573)
T PRK13206 294 VASHPNVLPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGR 373 (573)
T ss_pred hcCCCCCcCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhhhhhhhccceeeccCchHhhCCcEEeccCCcccccc
Confidence 22222221 11222111 011122333457889999999999986322
Q ss_pred ----CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC
Q 017968 235 ----RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 310 (363)
Q Consensus 235 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~ 310 (363)
..++|+.+..+ ...+..+. +......++..++|+++|.|||+++|+++.+|+|++|+.||||++|++.+.
T Consensus 374 ~~e~~~~~~q~a~~~---~~rr~~l~-g~~~~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~f~-- 447 (573)
T PRK13206 374 IGEVVLRTWQTAHVM---KRRRGALP-GDGRADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAFFG-- 447 (573)
T ss_pred ccchhhhHHHHHHHH---HhccCCCC-CCCcccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECccccC--
Confidence 12344443222 21111111 111245699999999999999999999878999999999999999987221
Q ss_pred CcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 311 PVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 311 ~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.++..||++|+++|..
T Consensus 448 ---------------~~~~~ti~~G~iv~~~ 463 (573)
T PRK13206 448 ---------------VRPHAVLKGGAIAWAA 463 (573)
T ss_pred ---------------CCccEEEECCEEEEec
Confidence 3678999999999875
No 93
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.75 E-value=4.4e-17 Score=138.46 Aligned_cols=241 Identities=16% Similarity=0.168 Sum_probs=145.4
Q ss_pred HhCCceEeecCCc---CCHHHHHH-HHHHcCCeEEEecccccCC-CCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeE
Q 017968 32 IHSGVTCFAEAGG---QHVSEMAK-AVELLGLRACLVQSTMDCG-EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 106 (363)
Q Consensus 32 l~~GvTtv~d~~~---~~~~~~~~-~~~~~gir~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 106 (363)
+.+||||++|.++ .+...+.+ ..+.+..|+.....+-..+ .+....+...+. ...++.+.+++....-. .+|
T Consensus 82 a~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs~~Gl~a~nE~~d~~ni--d~d~i~aa~reh~d~iv-GlK 158 (386)
T COG3964 82 APNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVSPPGLTASNELYDPDNI--DEDKIHAAFREHRDVIV-GLK 158 (386)
T ss_pred ccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeeccCcceeeehhhCChhhC--CHHHHHHHHHhCcCcEE-EEE
Confidence 7899999999875 33333322 2233333332221111100 000111111111 12344444544432111 123
Q ss_pred EEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCCh--
Q 017968 107 IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-- 184 (363)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-- 184 (363)
+-.+-+......-..+++..+.|++.++|+++|..+....- -+.++ .+++..++.||.+.-+
T Consensus 159 vR~s~~~~g~~GitPl~la~~ia~~~klPlmvHigePp~~~-------------dEvle---rL~~GDIitHcfngkpn~ 222 (386)
T COG3964 159 VRVSTEDIGEYGITPLTLALRIANDLKLPLMVHIGEPPVLM-------------DEVLE---RLRRGDIITHCFNGKPNT 222 (386)
T ss_pred EEeeeccccccCCchHHHHHHHHhhcCCceEEecCCCCccH-------------HHHHH---hccCCceeeeeccCCCCC
Confidence 33333322223334577888899999999999999865422 22222 2344568899987443
Q ss_pred ---------hHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCC-eEEEecCCCCCC-CCCcHHHHHHHHHHHhcccc
Q 017968 185 ---------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSN-NRMSIVDEMYLASLINKGRE 253 (363)
Q Consensus 185 ---------~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~-~~~lgTD~~~~~-~~~~~~~~~~~~~~~~~~~~ 253 (363)
.+.++++++|+...+..... ...+...++++..|+ +++|+||-+..+ -....++-...++.+.
T Consensus 223 ~l~~dg~vr~~vrra~erGV~fD~ghG~a--sfsf~vAr~aia~GllP~~ISSDlh~~~~~n~Pv~dla~~mSKll---- 296 (386)
T COG3964 223 ILTDDGVVRAEVRRARERGVIFDAGHGRA--SFSFNVARRAIANGLLPDIISSDLHTITKLNGPVYDLAWIMSKLL---- 296 (386)
T ss_pred ccccchhHHHHHHHHHhcceEEEccCCcc--eeeHHHHHHHHhcCCCcceeeccceeeeecCchHHHHHHHHHHHH----
Confidence 24677888888888655322 134566789999997 999999977654 2233455444444332
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCC
Q 017968 254 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 306 (363)
Q Consensus 254 ~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~ 306 (363)
..++++.++++.+|.|||..++++ .+|+|+||.+||++||+...
T Consensus 297 --------algmpl~~Vi~avT~npA~~i~l~-~~gtLa~G~~aD~tvf~lk~ 340 (386)
T COG3964 297 --------ALGMPLTDVINAVTHNPAVLIGLA-EIGTLAPGAFADITVFKLKN 340 (386)
T ss_pred --------HcCCcHHHHHHHHhcCHHHHhCcc-ccCccCCCcccceEEEEecc
Confidence 235999999999999999999997 78999999999999999753
No 94
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.74 E-value=1e-15 Score=145.18 Aligned_cols=191 Identities=19% Similarity=0.180 Sum_probs=122.3
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC-------hhHHH
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIG 188 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-------~~~~~ 188 (363)
..+++.+.++++.|+++|+++.+|+...... ...+...+ ...+ ...|.+|.. ++-++
T Consensus 224 g~t~~~l~~aL~~A~~~gv~V~iHa~tlne~------------G~~e~t~~-a~~g---~~iH~~H~egaggghapdii~ 287 (568)
T PRK13207 224 GATPAAIDNCLSVADEYDVQVAIHTDTLNES------------GFVEDTIA-AFKG---RTIHTFHTEGAGGGHAPDIIK 287 (568)
T ss_pred CCCHHHHHHHHHHHHHhCCEEEEeCCCcccc------------hHHHHHHH-hcCC---CEEEEEeecCCCcCCchHHHH
Confidence 4578999999999999999999999643321 11221111 1112 234555533 44567
Q ss_pred HHHhCCCeEE-EChhhhc---------------------------------cccCcccHHHHHHcCCeEEEecCCCCCC-
Q 017968 189 LLSRAGVKVS-HCPASAM---------------------------------RMLGFAPIKEMLHADICVSLGTDGAPSN- 233 (363)
Q Consensus 189 ~~~~~g~~v~-~~p~~~~---------------------------------~~~~~~~~~~~l~~G~~~~lgTD~~~~~- 233 (363)
.+...++.-. ++|+..+ |...+.+-.-+++.|++.+++||++..+
T Consensus 288 ~~~~~~v~p~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~ 367 (568)
T PRK13207 288 VAGEPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGR 367 (568)
T ss_pred HhhcCCCccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceeecccchhhhCCCEEEecCCcccccc
Confidence 7777665433 2332210 0011222334778999999999998652
Q ss_pred CCCcHHHHHHHHHHHhcccccc--cCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCC
Q 017968 234 NRMSIVDEMYLASLINKGREVF--ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 311 (363)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~ 311 (363)
-+..++..++.+...+...... ..+...+ ..+...++++|.|||+++|+++.+|+|++|+.||||+++++.+.
T Consensus 368 ~~~~~~r~~q~A~~r~~~~G~~~~d~~~~~n--~ri~~~l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~f~--- 442 (568)
T PRK13207 368 VGEVIIRTWQTAHKMKVQRGPLPGDSGRNDN--FRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAFFG--- 442 (568)
T ss_pred cccchhHHHHHHHHHHHccCCCCcccccCcc--chHHHHHHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchhcC---
Confidence 2356788887776654332211 0001111 22333399999999999999888999999999999999986321
Q ss_pred cCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 312 VHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 312 ~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.++..||++|++++..
T Consensus 443 --------------~~~~~ti~~G~iv~~~ 458 (568)
T PRK13207 443 --------------VKPELVLKGGMIAWAP 458 (568)
T ss_pred --------------CCceEEEECCEEEEec
Confidence 3678999999999976
No 95
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=99.73 E-value=9.6e-16 Score=139.91 Aligned_cols=274 Identities=15% Similarity=0.072 Sum_probs=149.3
Q ss_pred CCCchhHHHHHHHHHHHHHhCCceEeecCCcC-----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHH
Q 017968 14 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQ 88 (363)
Q Consensus 14 ~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (363)
.-..||+.+++++| +++|||||+||... +.+.+....+...-..+.-+...- +... ... .
T Consensus 20 ~~~~ed~~sgs~AA----a~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~vd~~~~~---~~~~-----~~~---~ 84 (344)
T cd01316 20 ATHKEDFASGTKAA----LAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKARCDYAFSI---GATS-----TNA---A 84 (344)
T ss_pred cCCcChHHHHHHHH----HhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcEEeEEEEe---eecC-----CCH---H
Confidence 34679999999999 99999999999642 233333222222211111111110 0000 011 1
Q ss_pred HHHHHHHHhcCCCCCCeEEEeccCccc-cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHh
Q 017968 89 SQKELYAKHHHAADGRIRIWFGIRQIM-NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKI 167 (363)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (363)
+..++... . ..++++....... ..+..........+...+.++..|....... ......+.
T Consensus 85 ~~~~l~~~----~-~g~k~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~e~~~~~------------~~l~la~~- 146 (344)
T cd01316 85 TVGELASE----A-VGLKFYLNETFSTLILDKITAWASHFNAWPSTKPIVTHAKSQTLA------------AVLLLASL- 146 (344)
T ss_pred HHHHHHhc----c-CeEEEEECCCCCCCccchHHHHHHHHHhcccCCCeEEehhhHHHH------------HHHHHHHH-
Confidence 12222111 1 2345544321110 0111111122223334577888888543210 02223333
Q ss_pred CCCCCCeeEEEeecCChhH-HHHHHhCC--CeEEEChhhhcc-----------------c-cCcccHHHHHHcCCeEEEe
Q 017968 168 EFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVSHCPASAMR-----------------M-LGFAPIKEMLHADICVSLG 226 (363)
Q Consensus 168 ~~~~~~~~~~H~~~~~~~~-~~~~~~~g--~~v~~~p~~~~~-----------------~-~~~~~~~~~l~~G~~~~lg 226 (363)
.+.+.++.|.+....-+ ++..++.| +++++||++-.. . .+...+++++. .+++++
T Consensus 147 --~g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~~~~k~~PPLR~~~dr~aL~~~l~--~id~i~ 222 (344)
T cd01316 147 --HNRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPRGQYEVRPFLPTREDQEALWENLD--YIDCFA 222 (344)
T ss_pred --HCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhcCCceeCCCCcCHHHHHHHHHHHh--cCCEEE
Confidence 24455555544433322 33444555 677899976421 1 22345666664 589999
Q ss_pred cCCCCCCCC----------CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCc
Q 017968 227 TDGAPSNNR----------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 296 (363)
Q Consensus 227 TD~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ 296 (363)
|||+|+... ..-.+ ..+..++. . .....+++.++++++|.||||++|+++. .
T Consensus 223 SDHaP~~~~~K~~~~a~~G~~g~e-~~lpl~~~-~--------v~~~~i~l~~l~~~~s~nPAk~~gl~~~--------~ 284 (344)
T cd01316 223 TDHAPHTLAEKTGNKPPPGFPGVE-TSLPLLLT-A--------VHEGRLTIEDIVDRLHTNPKRIFNLPPQ--------S 284 (344)
T ss_pred cCCCCCCHHHhcCCCCCCCcccHH-HHHHHHHH-H--------HHcCCCCHHHHHHHHHHhHHHHhCCCCC--------C
Confidence 999997521 11111 12222222 1 1234599999999999999999999532 3
Q ss_pred ccEEEEcCCCCCCC--------CcCChhhhhhccccCCCccEEEEccEEEEECCeec
Q 017968 297 ADMVVVDPFSWPMV--------PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 345 (363)
Q Consensus 297 ADlvv~d~~~~~~~--------~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 345 (363)
+||+++|++..+.+ ..++|+.+..+.+ +|.+||++|++||++|+++
T Consensus 285 ~~lvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G---~v~~ti~rG~~v~~~g~~~ 338 (344)
T cd01316 285 DTYVEVDLDEEWTIPKNPLQSKKGWTPFEGKKVKG---KVQRVVLRGETAFIDGEIV 338 (344)
T ss_pred CCEEEEeCCCcEEEChhhccccCCCCCCCCCEEee---EEEEEEECCEEEEECCEEc
Confidence 47999998865443 3356787777775 9999999999999999875
No 96
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.73 E-value=5.1e-16 Score=146.15 Aligned_cols=202 Identities=17% Similarity=0.170 Sum_probs=116.0
Q ss_pred ccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhH---
Q 017968 110 GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--- 186 (363)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~--- 186 (363)
..+..+..++..+.++++.|+++|+++.+|+...... ...+. ......+..++..|.....--+
T Consensus 218 K~~eD~g~t~~~i~~aL~~A~~~dv~VaiHadtlne~------------g~~E~-t~aa~~gr~iH~~H~egaggghapd 284 (567)
T cd00375 218 KLHEDWGATPAAIDTCLSVADEYDVQVAIHTDTLNES------------GFVED-TIAAIKGRTIHTYHTEGAGGGHAPD 284 (567)
T ss_pred EecCCCCCCHHHHHHHHHHHHhhCCEEEEECCCCCcc------------hHHHH-HHHHhcCCeEEEEecCCCCcccchH
Confidence 3333345688999999999999999999999753311 12222 1122334445555544333222
Q ss_pred -HHHHHhCCCe-EEEChhhh---------------------------------ccccCcccHHHHHHcCCeEEEecCCCC
Q 017968 187 -IGLLSRAGVK-VSHCPASA---------------------------------MRMLGFAPIKEMLHADICVSLGTDGAP 231 (363)
Q Consensus 187 -~~~~~~~g~~-v~~~p~~~---------------------------------~~~~~~~~~~~~l~~G~~~~lgTD~~~ 231 (363)
++.+-..++. -+++|+.. .|...+.+-.-+.+.|++.+++||...
T Consensus 285 i~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~ 364 (567)
T cd00375 285 IIKVAGHPNVLPSSTNPTRPFTVNTLDEHLDMLMVCHHLDPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQA 364 (567)
T ss_pred HHHhcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhh
Confidence 2222222221 11222111 000111222335678999999999874
Q ss_pred CCC-CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC
Q 017968 232 SNN-RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 310 (363)
Q Consensus 232 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~ 310 (363)
.+. +--.....+.+....+.+...........+....+.++++|.|||+++|+++++|+|++||.|||||++++.+.
T Consensus 365 mgr~ge~~~r~~q~a~k~~~~~g~~~~~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f~-- 442 (567)
T cd00375 365 MGRVGEVILRTWQTAHKMKAQRGPLPEDSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFFG-- 442 (567)
T ss_pred cCccceeeechHHHHHHHHHhcCCCCcccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCcccC--
Confidence 332 11122223333333332221111111112233455699999999999999888999999999999999987321
Q ss_pred CcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 311 PVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 311 ~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.++..||++|+++|..
T Consensus 443 ---------------~~p~~vi~~G~iv~~~ 458 (567)
T cd00375 443 ---------------VKPEMVLKGGFIAYAQ 458 (567)
T ss_pred ---------------CCeeEEEECCEEEEec
Confidence 3678999999999986
No 97
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.72 E-value=9.6e-16 Score=140.87 Aligned_cols=243 Identities=16% Similarity=0.159 Sum_probs=141.1
Q ss_pred HHHHHHHHHHhCCceEeecCCc---CCHHHHHHHH-HHcCCeEEEecccccCCCCCCcccccCChHH-HHHHHHHHHHHh
Q 017968 23 STLLCGIELIHSGVTCFAEAGG---QHVSEMAKAV-ELLGLRACLVQSTMDCGEGLPASWAVRTTDD-CIQSQKELYAKH 97 (363)
Q Consensus 23 ~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~-~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 97 (363)
.++++ +.+||||++|++. .+.+...+.. +..+.+......+...+ ++.+.... .... ..+...+.++..
T Consensus 54 ~~~~a----~~~GvTtvvd~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~g-~~~~~~~~-~~~~~~~~~l~~~~~e~ 127 (338)
T cd01307 54 PDMIG----VKSGVTTVVDAGSAGADNIDGFRYTVIERSATRVYAFLNISRVG-LVAQDELP-DPDNIDEDAVVAAAREY 127 (338)
T ss_pred HhHHH----HcCceeEEEeCCCCCCCCHHHHHHHHHHhhhceEEEEEeeeccc-cccccccC-ChhHCCHHHHHHHHHHC
Confidence 45555 9999999999864 3334433333 34554332211110001 00111111 1111 123333333333
Q ss_pred cCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEE
Q 017968 98 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSA 177 (363)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (363)
...- ..+++++..+.........+++.++.+++.|+|+++|+.+...... +.+.. +.....+.
T Consensus 128 ~~gi-~gik~~~~~~~~~~~~~~~l~~~~~~a~~~~~pi~vH~~~~~~~~~-------------~~~~~---l~~g~~~~ 190 (338)
T cd01307 128 PDVI-VGLKARASKSVVGEWGIKPLELAKKIAKEADLPLMVHIGSPPPILD-------------EVVPL---LRRGDVLT 190 (338)
T ss_pred cCcE-EEEEEEeecccccccCCcHHHHHHHHHHHcCCCEEEEeCCCCCCHH-------------HHHHH---hcCCCEEE
Confidence 2211 1256655544433333445889999999999999999976554322 11211 22234688
Q ss_pred EeecCCh-----------hHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCC-eEEEecCCCCCCC----CCcHHHH
Q 017968 178 HTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSNN----RMSIVDE 241 (363)
Q Consensus 178 H~~~~~~-----------~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~-~~~lgTD~~~~~~----~~~~~~~ 241 (363)
|+.+.+. +.+..+.++|+.+.++.... .....+..++++.|+ +.+++||.+..+. ...+...
T Consensus 191 H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~~--~~~~~~~~~l~~~G~~~~~lstD~~~~~~~~~p~~~l~~~ 268 (338)
T cd01307 191 HCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGTA--SFSFRVARAAIAAGLLPDTISSDIHGRNRTNGPVYALATT 268 (338)
T ss_pred eccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCCC--chhHHHHHHHHHCCCCCeeecCCccccCCCCCccccHHHH
Confidence 9888664 45777888898887663210 012244677889997 6789999854211 1111122
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCC
Q 017968 242 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 306 (363)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~ 306 (363)
+.. +. ..+++++++++++|.|||+++++ +++|+|++|++|||++++.+.
T Consensus 269 l~~---l~------------~~gi~~ee~~~~~T~NpA~~lgl-~~~G~l~~G~~ad~~v~~~~~ 317 (338)
T cd01307 269 LSK---LL------------ALGMPLEEVIEAVTANPARMLGL-AEIGTLAVGYDADLTVFDLKD 317 (338)
T ss_pred HHH---HH------------HcCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCcCCEEEEeCCC
Confidence 211 11 12589999999999999999999 468999999999999999874
No 98
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.71 E-value=8.8e-16 Score=148.01 Aligned_cols=251 Identities=17% Similarity=0.154 Sum_probs=142.6
Q ss_pred HHhCCceEeecCCcC-----C---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCC
Q 017968 31 LIHSGVTCFAEAGGQ-----H---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 102 (363)
Q Consensus 31 ~l~~GvTtv~d~~~~-----~---~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
++.+||||++++..+ . ++.+.+.++...++.+.... .+. .+.+ .......-..++..++++. . .-
T Consensus 73 al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~-s~v-p~~~--~e~~g~~~~~~~i~~~~~~-~--~V 145 (552)
T TIGR01178 73 VLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLP-SCV-PALQ--FETSGAVLTAEDIDELMEL-D--EV 145 (552)
T ss_pred HHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECC-CCC-CCCc--ccCCCCccCHHHHHHHHcC-C--Cc
Confidence 499999999987532 2 33445555555555432211 111 1111 1110011112344444432 0 11
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecC
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 182 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 182 (363)
-.++.++........+.+.++.+ +.+++.|..++.|+...... ....+...| ....|+...
T Consensus 146 ~glke~m~~~~v~~~d~~~l~~i-~~a~~~g~~I~gHap~l~~~-------------eL~~~~~aG-----i~~dHe~~s 206 (552)
T TIGR01178 146 LGLAEVMDYPGVINADIEMLNKI-NSARKRNKVIDGHCPGLSGK-------------LLNKYISAG-----ISNDHESTS 206 (552)
T ss_pred cEEEEEecchhhcCCCHHHHHHH-HHHHhCCCEEEecCCCCCHH-------------HHHHHHHcC-----CCCCcCcCC
Confidence 12344443322223455556555 78999999999999643321 223333333 345776544
Q ss_pred ChhHHHHHHhCCCeEEEChhhhccccCcccHHHHH--HcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCC
Q 017968 183 NHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML--HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 260 (363)
Q Consensus 183 ~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l--~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (363)
.+ +...-.+.|..+.+.-.+..+ +...+..++ ..+.+++++||.... .+++.+..+...+.+..
T Consensus 207 ~~-ea~e~~~~Gm~~~ir~gs~~~--n~~~~~~~~~~~~~~~~~l~TD~~~~---~~~~~~g~l~~~v~~ai-------- 272 (552)
T TIGR01178 207 IE-EAREKLRLGMKLMIREGSAAK--NLEALHPLINEKNCRSLMLCTDDRHV---NDILNEGHINHIVRRAI-------- 272 (552)
T ss_pred HH-HHHHHHHCCCEEEEeCCcccc--CHHHHHHHHhhcCCceEEEEeCCCCh---hHHHhcCCHHHHHHHHH--------
Confidence 44 444445788888775544322 222233222 356899999994211 23333222222222211
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 261 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 261 ~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
..+++++++++|+|.|||+++|++ +.|+|++|++|||+++|.. ....+..||++|++|.+
T Consensus 273 -~~g~~~~~Al~maT~npA~~lgl~-~~G~I~pG~~ADlvvl~~l------------------~~~~v~~v~~~G~~v~~ 332 (552)
T TIGR01178 273 -EHGVDPFDALQMASINPAEHFGID-VGGLIAPGDPADFVILKDL------------------RNFKVNKTYVKGKLLDL 332 (552)
T ss_pred -HcCCCHHHHHHHHHHHHHHHcCCC-CCcccCCCCcCCEEEECCC------------------CCceEEEEEECCEEEcc
Confidence 124899999999999999999997 4799999999999999842 11488999999999998
Q ss_pred C
Q 017968 341 N 341 (363)
Q Consensus 341 ~ 341 (363)
+
T Consensus 333 ~ 333 (552)
T TIGR01178 333 N 333 (552)
T ss_pred c
Confidence 7
No 99
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.70 E-value=4.4e-16 Score=139.24 Aligned_cols=274 Identities=17% Similarity=0.148 Sum_probs=148.2
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCC-cCCHH---HHHHH----HHHc--CCeEEEecccccCCCCCCcccccCChHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVS---EMAKA----VELL--GLRACLVQSTMDCGEGLPASWAVRTTDD 85 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~---~~~~~----~~~~--gir~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (363)
+.+.+..-++.. ++.|||++.... +...+ ..+++ +... ++.++..-+.+ -.+...+.++++.
T Consensus 72 ~~~~l~~i~~~~----~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP~----ls~~kkGAh~~~~ 143 (380)
T COG1820 72 SVETLETMAEAH----LRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQILGIHLEGPF----LSPEKKGAHNPEY 143 (380)
T ss_pred CHHHHHHHHHHh----hhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCceEEEEeecCc----cCHhhccCCCHHH
Confidence 445555555555 899999998643 23332 22222 2211 12222211111 1144555666666
Q ss_pred HHHHHHHHHHHhcCCCCCCe-EEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCC------
Q 017968 86 CIQSQKELYAKHHHAADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH------ 158 (363)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~------ 158 (363)
......+.++++.....+.+ .+-++|... .+.+ +++...+.|+.+.+=.++...+.....-..|...
T Consensus 144 ir~~~~~~~~~~~~~a~g~i~~vTlAPE~~--~~~e----~i~~l~~~giivs~GHS~Atye~~~~a~~~Ga~~~THlfN 217 (380)
T COG1820 144 IRPPDPEELEQLIAAADGLIKLVTLAPELD--GTKE----LIRLLANAGIVVSIGHSNATYEQARAAFEAGATFVTHLFN 217 (380)
T ss_pred hCCCCHHHHHHHHhhccCceEEEEECCCCC--CCHH----HHHHHHhCCeEEEecCccccHHHHHHHHHhCccEEEeecc
Confidence 65555555666655444444 444555542 1223 3333444444444422222222111111111100
Q ss_pred --ChHHHHHHhCCCCC-----C---eeEEEeecCChhHHHHHHhCC----CeEEEChhhhccc-cCcccHHH---HHHcC
Q 017968 159 --GTVTFLDKIEFLQN-----N---LLSAHTVWVNHTEIGLLSRAG----VKVSHCPASAMRM-LGFAPIKE---MLHAD 220 (363)
Q Consensus 159 --~~~~~~~~~~~~~~-----~---~~~~H~~~~~~~~~~~~~~~g----~~v~~~p~~~~~~-~~~~~~~~---~l~~G 220 (363)
.+. .-++-|+.|. + -+++.+.|++|..+++..+.+ +.+++.-.....+ .+...+.. -++.|
T Consensus 218 aMs~l-~hREPGvvGA~L~~~~~~~eiIaDG~HVhP~~~~ia~~~kg~~~i~LVTDam~a~G~~dg~y~lgg~~V~v~~g 296 (380)
T COG1820 218 AMSGL-HHREPGVVGAALDNPDVYAEIIADGVHVHPAAIRLALKAKGGDKIVLVTDAMAAAGLPDGEYILGGQTVTVADG 296 (380)
T ss_pred CCCCC-CCCCCcccceeecCCCeEEEEEccCcccCHHHHHHHHhccCCceEEEEEccccccCCCCccEEECCEEEEEECC
Confidence 000 1223333321 1 256778899999888776654 2222222111111 11111100 11233
Q ss_pred CeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEE
Q 017968 221 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMV 300 (363)
Q Consensus 221 ~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlv 300 (363)
.+.-.|+...++...|.+..+..... .+.++++|++|+|.+|||.+|+++++|+|++|++||||
T Consensus 297 --~~~~~~GtLAGS~Ltm~~avrn~v~~--------------~~~~~~eAv~maS~~PA~~lgl~~~~G~i~~G~~Adlv 360 (380)
T COG1820 297 --ARRLEDGTLAGSTLTMDEAVRNLVEW--------------GGISLAEAVRMASLNPAKALGLDDRLGSIKPGKDADLV 360 (380)
T ss_pred --EEECCCCceeeeeeeHHHHHHHHHHH--------------hCCCHHHHHHHhhhhHHHHhCCcCcccccCCCcccCEE
Confidence 34445666665667788888876433 24789999999999999999999889999999999999
Q ss_pred EEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 301 VVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 301 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
++|.+ .+|..||++|+++++
T Consensus 361 vld~d--------------------~~v~~T~i~G~~~~~ 380 (380)
T COG1820 361 VLDDD--------------------LNVKATWINGEKVFN 380 (380)
T ss_pred EECCC--------------------CcEEEEEECCEEeeC
Confidence 99987 699999999998873
No 100
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.69 E-value=5.9e-15 Score=139.43 Aligned_cols=172 Identities=20% Similarity=0.291 Sum_probs=111.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeE
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 197 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v 197 (363)
+.+.+.+.++.|++.|+++.+|+...... .+..+...|. ...|.....++.++++ +.|..+
T Consensus 119 ~~~~l~~~i~~A~~~g~~v~~Ha~g~~~~-------------~L~a~l~aGi-----~~dH~~~~~eea~e~l-~~G~~i 179 (422)
T cd01295 119 GDDEMLAKIQAAKKAGKPVDGHAPGLSGE-------------ELNAYMAAGI-----STDHEAMTGEEALEKL-RLGMYV 179 (422)
T ss_pred CcHHHHHHHHHHHhCCCEEEEeCCCCCHH-------------HHHHHHHcCC-----CCCcCCCcHHHHHHHH-HCCCEE
Confidence 55788889999999999999999654421 1111222332 1247655555556665 789999
Q ss_pred EEChhhhccccCcccHHHHHH--cCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHH
Q 017968 198 SHCPASAMRMLGFAPIKEMLH--ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 275 (363)
Q Consensus 198 ~~~p~~~~~~~~~~~~~~~l~--~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T 275 (363)
.+.+.+... ....+.+.+. .+.+++++||.++.. ++...-.....+.+. ...+++++++++++|
T Consensus 180 ~i~~g~~~~--~~~~~~~~l~~~~~~~i~l~TD~~~~~---~~~~~g~~~~v~r~a---------~~~g~s~~eal~~aT 245 (422)
T cd01295 180 MLREGSIAK--NLEALLPAITEKNFRRFMFCTDDVHPD---DLLSEGHLDYIVRRA---------IEAGIPPEDAIQMAT 245 (422)
T ss_pred EEECcccHh--hHHHHHHhhhhccCCeEEEEcCCCCch---hhhhcchHHHHHHHH---------HHcCCCHHHHHHHHh
Confidence 888654311 1112222222 478999999985321 121000000111110 022589999999999
Q ss_pred HHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 276 INGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 276 ~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.|||+++|+ +++|+|++|+.|||++++.. ...++..||++|+.|++.
T Consensus 246 ~n~A~~~gl-~~~G~i~~G~~AD~vv~~~~------------------~~~~v~~v~~~G~~v~~r 292 (422)
T cd01295 246 INPAECYGL-HDLGAIAPGRIADIVILDDL------------------ENFNITTVLAKGIAVVER 292 (422)
T ss_pred HHHHHHcCC-CCCcccCCCCcCCEEEECCC------------------CCCceEEEEECCeEEEEe
Confidence 999999999 56899999999999999842 124789999999999863
No 101
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.68 E-value=4.2e-15 Score=140.08 Aligned_cols=193 Identities=21% Similarity=0.190 Sum_probs=113.6
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHH-HHHHhCCCCCCeeEEEeecCCh----hHHHH
Q 017968 115 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVNH----TEIGL 189 (363)
Q Consensus 115 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~----~~~~~ 189 (363)
+..+++.+.+++++|+++|+++.+|+...... ...+ .++. +.+..++..|.....- +-++.
T Consensus 223 ~g~t~~~i~~aL~~A~~~dv~VaiHadtlne~------------g~~E~t~~a--~~gr~iH~~H~egaggghapd~l~~ 288 (569)
T PRK13308 223 WGAMPAAIDTCLEVADEYDFQVQLHTDTLNES------------GFVEDTLAA--IGGRTIHMYHTEGAGGGHAPDIIRV 288 (569)
T ss_pred CCCCHHHHHHHHHHHHhcCCEEEEeCCCcCcc------------hHHHHHHHH--hcCCeEEEEeccCCccCchhHHHHH
Confidence 35678899999999999999999999753311 1222 2222 2244455555443221 22333
Q ss_pred HHhCCCeE-EEChhhh---------------------------------ccccCcccHHHHHHcCCeEEEecCCCCCCCC
Q 017968 190 LSRAGVKV-SHCPASA---------------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNR 235 (363)
Q Consensus 190 ~~~~g~~v-~~~p~~~---------------------------------~~~~~~~~~~~~l~~G~~~~lgTD~~~~~~~ 235 (363)
+-..++.- +++|+.. .|...+.+-.-+.+.|++.+++||....+
T Consensus 289 ~~~~n~lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~mg-- 366 (569)
T PRK13308 289 VGEPHCLPSSTNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQGMG-- 366 (569)
T ss_pred hCCCCccCCCCCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHHHh--
Confidence 33333221 2222211 00011122233667899999999987543
Q ss_pred CcHHHHH----HHHHHHhcccccccCC-CCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC
Q 017968 236 MSIVDEM----YLASLINKGREVFANG-TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 310 (363)
Q Consensus 236 ~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~ 310 (363)
.+.+.+ +.+....+.+..+... .....+..+...++++|.|||+++|+++++|+|++|+.||||+++++.+.
T Consensus 367 -r~~e~i~r~~q~a~~~~~~~g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~fg-- 443 (569)
T PRK13308 367 -RIAEVIARTWQLASKMKDQRGPLPEDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAFFG-- 443 (569)
T ss_pred -HHHHHHHHHHHHHHHHhhcCCCCCcccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCcccC--
Confidence 233333 2332222212111111 00112234555799999999999999888999999999999999986221
Q ss_pred CcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 311 PVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 311 ~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
.++..||++|++++..
T Consensus 444 ---------------v~p~~ti~~G~iv~~~ 459 (569)
T PRK13308 444 ---------------IKPELVIKGGFPAWAA 459 (569)
T ss_pred ---------------CCeeEEEECCEEEEec
Confidence 3678999999998863
No 102
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.64 E-value=4.7e-14 Score=133.42 Aligned_cols=80 Identities=20% Similarity=0.163 Sum_probs=62.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 262 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 262 ~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+..++++++++|+|.|||++||+. ++|.|++|++|||+|+|.+.....+ +...+. . ....+.+||++|++|+++
T Consensus 427 ~Re~sL~EI~~mtTanPAkaLGL~-dkG~L~pGa~ADIaI~D~~~~~~~~---~~~~v~-~-~~~~v~~Tik~G~vV~~d 500 (556)
T TIGR03121 427 DREYSLYEIAIMTRAGPAKLLGLT-DRGHLGVGADADIAVYDINPDDVDT---DYADVE-K-AFSTALYVFKDGEIVVKD 500 (556)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCcCCEEEEeCcccccCC---chHHHh-h-ccCCccEEEECCEEEEEC
Confidence 446999999999999999999996 4699999999999999987543321 222221 1 124789999999999999
Q ss_pred Ceeccc
Q 017968 342 KKILLL 347 (363)
Q Consensus 342 ~~~~~~ 347 (363)
|+++..
T Consensus 501 Gei~~~ 506 (556)
T TIGR03121 501 GEIVET 506 (556)
T ss_pred CEEccC
Confidence 977643
No 103
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.61 E-value=2.4e-14 Score=133.18 Aligned_cols=191 Identities=21% Similarity=0.176 Sum_probs=113.7
Q ss_pred CCCeEEEeccCccccCCHHHH--HHHHHHHHHcCCeee-EeccCChhhHHHHHhhcCC---CCC----hHHHHHHhCCC-
Q 017968 102 DGRIRIWFGIRQIMNATDRLL--LETRDMAREFKTGIH-MHVAEIPYENQVVMDTRKV---DHG----TVTFLDKIEFL- 170 (363)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~l--~~~~~~a~~~g~~v~-~H~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~- 170 (363)
.+.+|+. +.++|.. .++++.+++.|+.+. -|............ ..|. .|. +...-++.++.
T Consensus 159 ~~~ik~~-------tlaPE~~~~~~~i~~~~~~gi~v~~GH~~a~~~~~~~a~-~~G~~~~tH~~n~m~~~~~r~~~~~~ 230 (374)
T cd00854 159 GGLIKLV-------TLAPELDGALELIRYLVERGIIVSIGHSDATYEQAVAAF-EAGATHVTHLFNAMSPLHHREPGVVG 230 (374)
T ss_pred CCCEEEE-------EECCCCCChHHHHHHHHHCCeEEEeeCCcCCHHHHHHHH-HcCCCeeeECCCCCCCcCCCCCcHHH
Confidence 3567764 2333444 678899999999995 78753311111111 1111 100 00000111111
Q ss_pred ----CC--Ce-eEEEeecCChhHHHHHHhCC--CeEEEChhhhccc---cCcccHHHH--HHcCCeEEEecCCCCCCCCC
Q 017968 171 ----QN--NL-LSAHTVWVNHTEIGLLSRAG--VKVSHCPASAMRM---LGFAPIKEM--LHADICVSLGTDGAPSNNRM 236 (363)
Q Consensus 171 ----~~--~~-~~~H~~~~~~~~~~~~~~~g--~~v~~~p~~~~~~---~~~~~~~~~--l~~G~~~~lgTD~~~~~~~~ 236 (363)
.. .. ++.|+.|+++++++.+.+.. -.+..||.++... .+..++... ...+....+++|... ++..
T Consensus 231 a~l~~~~~~~~li~dg~Hv~~~~~~~~~r~~g~~~~~lvtD~~~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~la-G~~~ 309 (374)
T cd00854 231 AALSDDDVYAELIADGIHVHPAAVRLAYRAKGADKIVLVTDAMAAAGLPDGEYELGGQTVTVKDGVARLADGTLA-GSTL 309 (374)
T ss_pred HhhcCCCCeEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEeccccccCCCCCeEEECCEEEEEECCEEEcCCCCee-ehHh
Confidence 11 12 77899999999998888774 5566666554322 122222211 011223344444332 2335
Q ss_pred cHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChh
Q 017968 237 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRI 316 (363)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~ 316 (363)
++.+.++.+... .+++++++++|+|.|||+++|++++.|.|++|+.|||+++|.+
T Consensus 310 ~l~~~~~~l~~~--------------~~l~~~~al~~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~----------- 364 (374)
T cd00854 310 TMDQAVRNMVKW--------------GGCPLEEAVRMASLNPAKLLGLDDRKGSLKPGKDADLVVLDDD----------- 364 (374)
T ss_pred hHHHHHHHHHHh--------------hCCCHHHHHHHHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCC-----------
Confidence 566666554321 2389999999999999999999766899999999999999986
Q ss_pred hhhhccccCCCccEEEEcc
Q 017968 317 TSLVYCMRTENVVSVMCNG 335 (363)
Q Consensus 317 ~~~~~~~~~~~v~~v~~~G 335 (363)
..|..||++|
T Consensus 365 ---------~~v~~~~~~G 374 (374)
T cd00854 365 ---------LNVKATWING 374 (374)
T ss_pred ---------CcEEEEEeCc
Confidence 4889999887
No 104
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.57 E-value=2e-13 Score=127.57 Aligned_cols=259 Identities=19% Similarity=0.240 Sum_probs=152.7
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCceEee-cC-------CcCCHHHHHHHHHHcCCeEEEec-ccccCCCCCCcccccCCh
Q 017968 13 SNMTEEDSYISTLLCGIELIHSGVTCFA-EA-------GGQHVSEMAKAVELLGLRACLVQ-STMDCGEGLPASWAVRTT 83 (363)
Q Consensus 13 ~~~~~ed~~~~~~~~~~~~l~~GvTtv~-d~-------~~~~~~~~~~~~~~~gir~~~~~-~~~~~~~~~~~~~~~~~~ 83 (363)
+.+||..|.. +. +..||||++ |. +......+++.+++..++.++.. ++.-.. | ......
T Consensus 89 Sm~tP~~FA~---~V----lp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~~~pScVPat---~--~Et~Ga 156 (584)
T COG1001 89 SMLTPSEFAR---AV----LPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYVMLPSCVPAT---P--FETSGA 156 (584)
T ss_pred cccCHHHHHH---Hh----hccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEEecccCccCC---c--cccCCc
Confidence 4567776432 22 788999987 32 33556788889999888876542 222110 1 111111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEE--EeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH
Q 017968 84 DDCIQSQKELYAKHHHAADGRIRI--WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 161 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 161 (363)
.-..++..++++.- ..+.+ ++...+.-.-+ +.+-..++.+++.|+++.-|+-..... ..
T Consensus 157 ~l~a~~i~e~~~~p-----~Vigl~E~Mn~pgVi~~D-~~~l~kl~a~~~~~k~VdGHapgl~g~-------------~L 217 (584)
T COG1001 157 ELTAEDIKELLEHP-----EVIGLGEMMNFPGVIEGD-PDMLAKLEAARKAGKPVDGHAPGLSGK-------------EL 217 (584)
T ss_pred eecHHHHHHHhhCC-----CccchhhhcCCchhccCC-HHHHHHHHHHHHcCCeecccCCCCChH-------------HH
Confidence 11223344443221 11111 11212222223 344556678899999999999754431 23
Q ss_pred HHHHHhCCCCCCeeEEEeecCChhH-HHHHHhCCCeEEEChhhhccccCcccHHHHH-HcC-CeEEEecCCCCCCC---C
Q 017968 162 TFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVKVSHCPASAMRMLGFAPIKEML-HAD-ICVSLGTDGAPSNN---R 235 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l-~~G-~~~~lgTD~~~~~~---~ 235 (363)
..+...|.- ..|= ..+.+| +++ .+.|..+.+--.|..+ +...+..++ +.| -.+++.||...... .
T Consensus 218 n~Y~aaGi~-----tDHE-~~t~EEa~~k-lr~Gm~i~iReGS~a~--dl~~l~~~i~e~~~~~~~lcTDD~~p~dl~~e 288 (584)
T COG1001 218 NAYIAAGIS-----TDHE-STTAEEALEK-LRLGMKIMIREGSAAK--DLAALLPAITELGSRRVMLCTDDRHPDDLLEE 288 (584)
T ss_pred HHHHhcCCC-----cCcc-cCCHHHHHHH-HhCCcEEEEEcCchhh--hHHHHHHHHhhcCCceEEEECCCCChhHhhhc
Confidence 333444432 2343 345555 444 4678887765433222 222333332 345 37899999764421 1
Q ss_pred CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCCh
Q 017968 236 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDR 315 (363)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~ 315 (363)
..+-..++.+. +.++++.++++|+|.|||+.+|+++ +|.|+||++||||+++.-
T Consensus 289 Ghld~~vR~Ai---------------~~Gv~p~~a~qmAtiN~A~~~gl~~-~G~iAPG~~ADlvi~~DL---------- 342 (584)
T COG1001 289 GHLDRLVRRAI---------------EEGVDPLDAYQMATINPAEHYGLDD-LGLIAPGRRADLVILEDL---------- 342 (584)
T ss_pred CCHHHHHHHHH---------------HcCCCHHHHHHHHhcCHHHHcCCcc-cccccCCccccEEEEccc----------
Confidence 12222223221 3469999999999999999999975 899999999999999852
Q ss_pred hhhhhccccCCCccEEEEccEEEEECCeec
Q 017968 316 ITSLVYCMRTENVVSVMCNGQWVMKNKKIL 345 (363)
Q Consensus 316 ~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 345 (363)
.+..+..|+++|+++.++|+.+
T Consensus 343 --------~~~~v~~V~~~G~~v~~~g~~l 364 (584)
T COG1001 343 --------RNFKVTSVLIKGRVVAEDGKAL 364 (584)
T ss_pred --------ccCceeEEEECCEEEecCCcee
Confidence 3369999999999999999733
No 105
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.57 E-value=3.6e-13 Score=126.92 Aligned_cols=79 Identities=20% Similarity=0.204 Sum_probs=61.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 262 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 262 ~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+..++++++++++|.|||+++|++ ++|.|++|++|||+|||++.....+ ++..... ....+|..||++|++|+++
T Consensus 424 ~reLSLeei~~mtT~nPAKiLGL~-~kG~L~~G~~ADLvIfD~n~~~v~~-~dl~s~~---~~~gkV~~Tiv~GkvVv~d 498 (541)
T cd01304 424 DREYSLYEIAIMTRAGPAKLLGLS-DKGHLGVGADADIAIYDDDPDQVDP-SDYEKVE---KAFSRAAYVLKDGEIVVKD 498 (541)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCC-CCCccCCCCcCCEEEEeCCcCccCc-hhhcCce---eecCcEEEEEECCEEEEEC
Confidence 345899999999999999999996 4699999999999999988653222 2222111 1224799999999999998
Q ss_pred Ceec
Q 017968 342 KKIL 345 (363)
Q Consensus 342 ~~~~ 345 (363)
|+++
T Consensus 499 Geiv 502 (541)
T cd01304 499 GEVV 502 (541)
T ss_pred CEEc
Confidence 8765
No 106
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.56 E-value=4.4e-13 Score=123.92 Aligned_cols=274 Identities=17% Similarity=0.158 Sum_probs=139.6
Q ss_pred CCchhHHHHHHHHHHHHHhCCceEeecCCcCC-HH---HHHHHHHHc--CCeEEEecccccCCCCC-CcccccCChHHHH
Q 017968 15 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VS---EMAKAVELL--GLRACLVQSTMDCGEGL-PASWAVRTTDDCI 87 (363)
Q Consensus 15 ~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~---~~~~~~~~~--gir~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 87 (363)
.++|++.+.++.. ++.|||+++++.... .+ ..++...+. .-.....+++.-.++-+ |...+..+.+...
T Consensus 74 ~~~e~~~~~~~~~----~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~HlEGPfi~~~~~Gah~~~~i~ 149 (380)
T TIGR00221 74 ASFETLEIMSERL----PKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHLEGPFLSPEKKGAHPPEYIR 149 (380)
T ss_pred CCHHHHHHHHHHH----HhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEeeecCcCChhhcCCCCHHHhh
Confidence 3567887777766 999999999875433 22 222222111 00111111111111111 3334444554444
Q ss_pred HHHHHHHHHhcCCCCCCeEEE-eccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCC---------
Q 017968 88 QSQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD--------- 157 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~--------- 157 (363)
+...+.++++.....+.++++ ++|... .-.++++++.+.|+.+.+=.+....+.....-..|..
T Consensus 150 ~p~~~~~~~~~~~~~~~i~~vTlAPE~~------~~~~~i~~l~~~gi~vs~GHs~A~~~~~~~a~~~Ga~~~THlfNaM 223 (380)
T TIGR00221 150 EPDVELFKKFLCEAGGVITKVTLAPEED------QHFELIRHLKDAGIIVSAGHTNATYELAKAAFKAGATHATHLYNAM 223 (380)
T ss_pred CcCHHHHHHHHHhcCCCEEEEEECCCCC------ChHHHHHHHHHCCeEEEeeCCCCCHHHHHHHHHcCCCeeeeeccCC
Confidence 443344444443333455542 344331 1135556666667766653222222222221122221
Q ss_pred -------CChH-HHHHHhCCCCCCeeEEEeecCChhHHHHHHhCC-C-e-EEEChhhh-ccc-cCcccHH---HHHHcCC
Q 017968 158 -------HGTV-TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG-V-K-VSHCPASA-MRM-LGFAPIK---EMLHADI 221 (363)
Q Consensus 158 -------~~~~-~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g-~-~-v~~~p~~~-~~~-~~~~~~~---~~l~~G~ 221 (363)
+..+ ..+..-.+. --++..+.|+.++-++.+.+.. . . +-++-... ..+ .+...+. -.++.|.
T Consensus 224 ~~~~hR~pg~vga~l~~~~~~--~elI~Dg~Hv~p~~~~~~~r~kg~~~~~lvtDa~~~~g~~~G~y~l~~~~v~~~~g~ 301 (380)
T TIGR00221 224 SPIHHREPGVIGAVLDHDDVY--TEIIADGIHIHPLNIRLAKKLKGDSKLCLVTDSMAAAGAKDGVFIFGGKTVYIREGT 301 (380)
T ss_pred CCcCCCCCcHHHHHhcCCCcE--EEEEcCCCcCCHHHHHHHHHhcCCCcEEEEeccccccCCCCceEeECCEEEEEECCE
Confidence 0111 111111110 1356678899998887766543 2 2 22222111 111 1111110 0111222
Q ss_pred eEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEE
Q 017968 222 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 301 (363)
Q Consensus 222 ~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv 301 (363)
. .+ .|+...++...+.+.++.+... .+++++++++|+|.|||+++|+++++|+|++|++|||++
T Consensus 302 ~-~~-~~g~LAGs~ltl~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvv 365 (380)
T TIGR00221 302 C-LD-SNGTLAGSSLTMIEGARNLVEF--------------TNISLTDAARMSSLNPARALGIDDRLGSVTVGKDANLVV 365 (380)
T ss_pred E-Ec-CCCceechhhhHHHHHHHHHHh--------------hCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCcCCEEE
Confidence 1 11 3443343446677777654311 248999999999999999999976679999999999999
Q ss_pred EcCCCCCCCCcCChhhhhhccccCCCccEEEEccE
Q 017968 302 VDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQ 336 (363)
Q Consensus 302 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~ 336 (363)
+|++ .+|..||++|+
T Consensus 366 ~d~~--------------------~~v~~t~~~G~ 380 (380)
T TIGR00221 366 FTPD--------------------FEVILTIVNGN 380 (380)
T ss_pred ECCC--------------------CCEEEEEeCCC
Confidence 9987 48999999985
No 107
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.56 E-value=3.4e-13 Score=123.78 Aligned_cols=163 Identities=10% Similarity=0.060 Sum_probs=96.6
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhC--CC
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GV 195 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~--g~ 195 (363)
+.+.+.++++.++++|+++.+|+.+......................++. .+.+.++.|.. +.+.++.+++. .+
T Consensus 111 d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e~~~~~~~~~lA~~~--p~~~v~i~Hvs--t~~~~~~i~~ak~~v 186 (335)
T cd01294 111 DLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREAKFIPVLEPLAQRF--PKLKIVLEHIT--TADAVEYVKSCNENV 186 (335)
T ss_pred CHHHHHHHHHHHHHcCCeEEEecCCCcccccchhhHHHHHHHHHHHHHHc--CCCeEEEeccc--HHHHHHHHHhCCCCc
Confidence 45789999999999999999999765431100000000000112222221 13345555543 23446666544 58
Q ss_pred eEEEChhhhcc---------------------c-cCcccHHHHHHcCCeE-EEecCCCCCCC----------CCcHHHHH
Q 017968 196 KVSHCPASAMR---------------------M-LGFAPIKEMLHADICV-SLGTDGAPSNN----------RMSIVDEM 242 (363)
Q Consensus 196 ~v~~~p~~~~~---------------------~-~~~~~~~~~l~~G~~~-~lgTD~~~~~~----------~~~~~~~~ 242 (363)
++++||++-.. . .+...+++++..|.++ +|+|||+|+.. +...++.+
T Consensus 187 t~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~~~g~~Gi~~~~~~ 266 (335)
T cd01294 187 AATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKESSCGCAGIFSAPIA 266 (335)
T ss_pred EEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccCCCCCccccCHHHH
Confidence 99999966321 1 1234678889999999 59999999742 11112111
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCC
Q 017968 243 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 295 (363)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~ 295 (363)
. ..++.. .. .++++++++++++.||||++|+.+++|.|.+|.
T Consensus 267 l-~~~~~~---------~~-~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 267 L-PYLAEV---------FE-EHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred H-HHHHHH---------Hh-ccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 1 111110 11 259999999999999999999976666555554
No 108
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.56 E-value=8e-13 Score=122.51 Aligned_cols=128 Identities=21% Similarity=0.270 Sum_probs=82.5
Q ss_pred eEEEeecCChhHHHHHHhCC-CeEE-EChhhhccccCcccHHH-------HHHcCCeEEEecCCCCCCCCCcHHHHHHHH
Q 017968 175 LSAHTVWVNHTEIGLLSRAG-VKVS-HCPASAMRMLGFAPIKE-------MLHADICVSLGTDGAPSNNRMSIVDEMYLA 245 (363)
Q Consensus 175 ~~~H~~~~~~~~~~~~~~~g-~~v~-~~p~~~~~~~~~~~~~~-------~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~ 245 (363)
+++.+.|+.+.-++.+.+.. -.+. ++-.. ...+.++-.. .++.|.. .+ .|+...++...+.+.++.+
T Consensus 245 lI~Dg~Hv~p~~~~~~~~~k~~~~~lvtDa~--~~~G~~~g~y~l~~~~v~v~~g~~-~~-~~G~LAGs~l~l~~~v~~l 320 (382)
T PRK11170 245 IIADGLHVDYANIRNAKRLKGDKLCLVTDAT--APAGANIEQFIFAGKTIYYRDGLC-VD-ENGTLSGSALTMIEAVRNL 320 (382)
T ss_pred EEcCcccCCHHHHHHHHHhcCCcEEEEeccc--cCCCCCCCeEEECCEEEEEECCEE-EC-CCCcccccHhHHHHHHHHH
Confidence 56678889998877765543 2222 22211 1111111110 1122221 11 2333333445667776654
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccC
Q 017968 246 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRT 325 (363)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~ 325 (363)
.. ..+++++++++|+|.|||+++|+++++|+|++|++|||+++|.+
T Consensus 321 ~~--------------~~~~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvvld~~-------------------- 366 (382)
T PRK11170 321 VE--------------HVGIALDEALRMATLYPARAIGVDKRLGSIEAGKVANLTAFTRD-------------------- 366 (382)
T ss_pred HH--------------hcCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEECCC--------------------
Confidence 32 12589999999999999999999766899999999999999976
Q ss_pred CCccEEEEccEEEEE
Q 017968 326 ENVVSVMCNGQWVMK 340 (363)
Q Consensus 326 ~~v~~v~~~G~~v~~ 340 (363)
.++..||++|+.++-
T Consensus 367 ~~v~~v~~~G~~~~~ 381 (382)
T PRK11170 367 FKITKTIVNGNEVVT 381 (382)
T ss_pred CcEEEEEECCEEeec
Confidence 489999999998873
No 109
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.54 E-value=6.3e-13 Score=128.51 Aligned_cols=257 Identities=14% Similarity=0.114 Sum_probs=147.9
Q ss_pred CCchhHHHHHHHHHHHHHhCCceEeecCCc--------CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHH
Q 017968 15 MTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC 86 (363)
Q Consensus 15 ~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
++++++.. .++.+||||+++++. ..++.+.+.++..++..++..... ....+ ........-.
T Consensus 98 ~~p~~~a~-------aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~ps~--vpa~~-~~Et~Ga~~~ 167 (588)
T PRK10027 98 MTPVTFET-------ATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSC--VPALE-GCDVNGASFT 167 (588)
T ss_pred CCHhHHHH-------HHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEeeccc--CcCCc-ccccCCCcCC
Confidence 46666533 248999999998542 234566777777887765432211 10011 0111111112
Q ss_pred HHHHHHHHHHhcCCCCCCeEEE--eccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHH
Q 017968 87 IQSQKELYAKHHHAADGRIRIW--FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 164 (363)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
.++..++++. ...+..+ +...+....+++.+.++... .|+++.-|+-..... ....+
T Consensus 168 ~~~~~~~l~~-----~~v~glgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p~l~g~-------------~L~ay 226 (588)
T PRK10027 168 LEQMLAWRDH-----PQVTGLAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCPGLGGK-------------ELNAY 226 (588)
T ss_pred HHHHHHHhcC-----CCceeEEeccCccccccCCHHHHHHHHHh---CCCceECCCCCCChH-------------HHHHH
Confidence 2344444331 1222221 22233334567778777743 788999998654321 23334
Q ss_pred HHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHc-C-CeEEEecCCCCCCC---CCcHH
Q 017968 165 DKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN---RMSIV 239 (363)
Q Consensus 165 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~-G-~~~~lgTD~~~~~~---~~~~~ 239 (363)
...|+. -.|-+...++-+++ .+.|..+.+-..+..+ +...+..++.. . -.+++.||...... ...+.
T Consensus 227 ~aaGi~-----sDHE~~t~eea~ek-lr~Gm~v~iRegS~~~--nl~~l~~~~~~~~~~~~~l~TDd~~~~~l~~~Ghi~ 298 (588)
T PRK10027 227 IAAGIE-----NCHESYQLEEGRRK-LQLGMSLMIREGSAAR--NLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHID 298 (588)
T ss_pred HHcCCC-----CCcccCCHHHHHHH-HHCCCEEEEeCCcccc--CHHHHHHHhhccCCCeEEEEcCCCChHHHHhccCHH
Confidence 444442 34544433444555 4688888876554322 23333333322 1 36799999764310 11222
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhh
Q 017968 240 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSL 319 (363)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~ 319 (363)
..++.+. ...++++++|++|+|.|||+.+|++ +.|+|++|+.|||+++|...
T Consensus 299 ~~vr~av--------------~~~Gi~~~~Ai~mAT~nPA~~lgl~-d~G~IapG~~ADlvvld~l~------------- 350 (588)
T PRK10027 299 ALIRRLI--------------EQHNVPLHVAYRVASWSTARHFGLN-HLGLLAPGKQADIVLLSDAR------------- 350 (588)
T ss_pred HHHHHHH--------------HHcCCCHHHHHHHHHHHHHHHcCCC-CCcccCCCCcCCEEEEccCC-------------
Confidence 3333321 1235899999999999999999997 47999999999999998631
Q ss_pred hccccCCCccEEEEccEEEEECCee
Q 017968 320 VYCMRTENVVSVMCNGQWVMKNKKI 344 (363)
Q Consensus 320 ~~~~~~~~v~~v~~~G~~v~~~~~~ 344 (363)
...+..||++|++|+++ +.
T Consensus 351 -----~~~v~~v~~~G~~v~~~-~~ 369 (588)
T PRK10027 351 -----KVTVQQVLVKGEPIDAQ-TL 369 (588)
T ss_pred -----CceEEEEEECCEEeecc-cc
Confidence 13789999999999987 53
No 110
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.51 E-value=1e-11 Score=115.55 Aligned_cols=265 Identities=15% Similarity=0.126 Sum_probs=140.1
Q ss_pred HHhCCceEeecCC---cCCHHHHHHHHHHcCCeEEEecccccCCCCC-CcccccCChHHHHHHHHHHHHHhcCCCCCCe-
Q 017968 31 LIHSGVTCFAEAG---GQHVSEMAKAVELLGLRACLVQSTMDCGEGL-PASWAVRTTDDCIQSQKELYAKHHHAADGRI- 105 (363)
Q Consensus 31 ~l~~GvTtv~d~~---~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 105 (363)
++..||||+++++ +.+.+.+.+.++..+.+.+... .+. ..|. |+...........++..+..+... ..+
T Consensus 74 a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~G~~~~~~~~~~~~~~~~~l~~~~~~~~----~~vv 147 (365)
T TIGR03583 74 GVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALL-NIS-RIGLVAQDELADLSNLDASAVKQAVERYP----DFIV 147 (365)
T ss_pred hhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEe-eeh-hccccChhhhhChHHhHHHHHHHHHHhCc----CcEE
Confidence 3788999999875 3455666666665554432211 111 0121 211100101112233333333221 222
Q ss_pred --EEEeccCccc--cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeec
Q 017968 106 --RIWFGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 181 (363)
Q Consensus 106 --~~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 181 (363)
+..+++.... ..++..+.+.+..+ +.++|+.+|+.+...... +.++.... + ....|+..
T Consensus 148 ~~~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~~~-------------~i~~~~~~-g--~~~~H~fn 210 (365)
T TIGR03583 148 GLKARMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPELD-------------EILALMEK-G--DVLTHCFN 210 (365)
T ss_pred EEEEeecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccCHH-------------HHHHHhcC-C--Ceeeeeec
Confidence 3334432111 12234444444433 689999999987654322 22222211 1 25689887
Q ss_pred CCh-----------hHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCC-eEEEecCCCCCC----CCCcHHHHHHHH
Q 017968 182 VNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSN----NRMSIVDEMYLA 245 (363)
Q Consensus 182 ~~~-----------~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~-~~~lgTD~~~~~----~~~~~~~~~~~~ 245 (363)
..+ +++....+.|..+.+....... .......+...++ .++.++|.+..+ +...+...++.+
T Consensus 211 g~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~~~--~~~~~~~~~~~~~~~~td~~d~~~~~~~~gp~~~l~~~~~~~ 288 (365)
T TIGR03583 211 GKPNGILRETGEVKPSVLEAYNRGVILDVGHGTASF--SFHVAEKAKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKF 288 (365)
T ss_pred CCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCCCc--hHHHHHHHHhCCCCCcccccccccCCCccCccccHHHHHHHH
Confidence 666 5566666778877765311111 1112233444553 466777763221 111233333332
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccC
Q 017968 246 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRT 325 (363)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~ 325 (363)
. . .+++++++++++|.|||+++|+++ +|+|++|++|||+++|.+.-. ....+.....+.....
T Consensus 289 ~--~-------------~g~~~~ea~~~~t~npa~~~gl~~-~g~i~~g~~ad~~~~~~~~~~-~~~~~~~g~~~~~~~~ 351 (365)
T TIGR03583 289 L--A-------------LGYSLEEVIEKVTKNAAEILKLTQ-KGRLQEGYDADLTIFTVKAEP-KKLTDSEGDSRIAEEQ 351 (365)
T ss_pred H--H-------------cCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcccEEEEecCCCC-ceeecCCCCEEEeccc
Confidence 1 1 248999999999999999999964 799999999999999975422 2222223333333334
Q ss_pred CCccEEEEccEE
Q 017968 326 ENVVSVMCNGQW 337 (363)
Q Consensus 326 ~~v~~v~~~G~~ 337 (363)
..+..|+++|+.
T Consensus 352 ~~~~~~~~~~~~ 363 (365)
T TIGR03583 352 IKPLAVIIGGEY 363 (365)
T ss_pred cceEEEEECCEE
Confidence 577889999985
No 111
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=99.48 E-value=9.1e-12 Score=112.45 Aligned_cols=238 Identities=17% Similarity=0.133 Sum_probs=153.8
Q ss_pred ccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecC---C------cCCHH--------HHHHHHHHcC-CeEEEe
Q 017968 3 WLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---G------GQHVS--------EMAKAVELLG-LRACLV 64 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~---~------~~~~~--------~~~~~~~~~g-ir~~~~ 64 (363)
+++.+........++++++..++..+.++.+.||..+--. . ....+ .+.++....+ +..-+.
T Consensus 27 f~~~f~~~~~~l~~~~~l~~~~~~~~~~~~~d~V~Y~E~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~lI 106 (305)
T cd00443 27 FFEKFLLVHNLLQKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAKQWFPPIKVRLI 106 (305)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEcchhhcCcccCCCHHHHHHHHHHHHHHHHHHcCCeeEeEE
Confidence 3444555555567899999999999999999999986421 1 11221 2223344445 665555
Q ss_pred cccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccC---CHHHHHHHHHHHHHcC-CeeeEec
Q 017968 65 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA---TDRLLLETRDMAREFK-TGIHMHV 140 (363)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~l~~~~~~a~~~g-~~v~~H~ 140 (363)
++..... ++ +.......+..++...+. ...++ ++..+.+.. +...+...++.|++.| +++.+|+
T Consensus 107 ~~~~R~~---~~----~~~~~~~~~~~~l~~~~~---~~vvG--~Dl~g~E~~~~~~~~~f~~~~~~ar~~g~l~~t~Ha 174 (305)
T cd00443 107 LSVDRRG---PY----VQNYLVASEILELAKFLS---NYVVG--IDLVGDESKGENPLRDFYSYYEYARRLGLLGLTLHC 174 (305)
T ss_pred EEEeCCC---Ch----hhhhhhHHHHHHHHHHhc---CCEEE--EEcCCCCCCCCCCHHHHHHHHHHHHHcCCcceEEee
Confidence 5555321 11 000112233333333332 22344 333333222 5778889999999999 9999999
Q ss_pred cCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCCh--hHHHHHHhCCCeEEEChhhhccccC-----cccH
Q 017968 141 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEIGLLSRAGVKVSHCPASAMRMLG-----FAPI 213 (363)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~g~~v~~~p~~~~~~~~-----~~~~ 213 (363)
+|... +.........+ ...+.|+.++.. +.++.++++++.+++||++|..+.. ..|+
T Consensus 175 GE~~~--------------~~~v~~~~~~~--~~RIgHg~~~~~~p~~~~~l~~~~i~ie~CP~SN~~~~~~~~~~~hP~ 238 (305)
T cd00443 175 GETGN--------------REELLQALLLL--PDRIGHGIFLLKHPELIYLVKLRNIPIEVCPTSNVVLGTVQSYEKHPF 238 (305)
T ss_pred cCCCC--------------hHHHHHHHHhc--cceeeceEecCCCHHHHHHHHHcCCEEEECcchhhhhcCCCChhhChH
Confidence 98743 12222223332 345799999987 8899999999999999999987732 3789
Q ss_pred HHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccC
Q 017968 214 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 284 (363)
Q Consensus 214 ~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~ 284 (363)
.+++++|++++++||.+..... ++.+++..+.... +++.++..++ ..|+-+.-.+
T Consensus 239 ~~~~~~G~~v~i~TDd~~~~~~-~l~~E~~~~~~~~--------------~l~~~~l~~l-~~nsi~~sf~ 293 (305)
T cd00443 239 MRFFKAGLPVSLSTDDPGIFGT-SLSEEYSLAAKTF--------------GLTFEDLCEL-NRNSVLSSFA 293 (305)
T ss_pred HHHHHCCCeEEEeCCCCcccCC-ChHHHHHHHHHHc--------------CcCHHHHHHH-HHHHHHHhcC
Confidence 9999999999999999876433 7888887664322 3778885554 4677666554
No 112
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.44 E-value=4.1e-12 Score=112.39 Aligned_cols=256 Identities=20% Similarity=0.195 Sum_probs=155.2
Q ss_pred HHHHHhCCceEeecCC---------------cCCHHHHHHHHHHcCCeE-EEecccccCCCCCCcccccCChHHHHHHHH
Q 017968 28 GIELIHSGVTCFAEAG---------------GQHVSEMAKAVELLGLRA-CLVQSTMDCGEGLPASWAVRTTDDCIQSQK 91 (363)
Q Consensus 28 ~~~~l~~GvTtv~d~~---------------~~~~~~~~~~~~~~gir~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (363)
+.++|.+||||+.--+ +-+...++++++...+.. +++.+.-.. | .
T Consensus 144 i~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a~d~~p~N~g~lgKGn~s~----~---------------~ 204 (568)
T COG0804 144 IEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQAADGLPMNIGFLGKGNASN----P---------------A 204 (568)
T ss_pred HHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHHhhhcCceeeEEeecCCCCC----c---------------h
Confidence 4566999999998432 133567788888777764 444433211 1 1
Q ss_pred HHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCC
Q 017968 92 ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 171 (363)
Q Consensus 92 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (363)
.+.+++.. +- +.+..|..+..++..++..+..|.+++++|.+|.+.-. +..+. ...+.++. +
T Consensus 205 ~L~Eqi~a---Ga--~GlKlHEDWG~TpaaI~~~L~VAD~~DvqVaiHtDTLN-EsGfv----------EdTi~A~~--g 266 (568)
T COG0804 205 PLAEQIEA---GA--IGLKLHEDWGATPAAIDTCLSVADEYDVQVAIHTDTLN-ESGFV----------EDTIAAIK--G 266 (568)
T ss_pred hHHHHHhh---cc--ceeEeecccCCCHHHHHHHHhhhhhhceEEEEeecccc-cccch----------HhHHHHhc--C
Confidence 12333322 11 23667888899999999999999999999999985422 11111 11122111 1
Q ss_pred CCeeEEEeecCC-------hhHHHHHHhCCCeE-EECh--------------------hhhc-------------cccCc
Q 017968 172 NNLLSAHTVWVN-------HTEIGLLSRAGVKV-SHCP--------------------ASAM-------------RMLGF 210 (363)
Q Consensus 172 ~~~~~~H~~~~~-------~~~~~~~~~~g~~v-~~~p--------------------~~~~-------------~~~~~ 210 (363)
+. .|..|.. |+-++.+...++.- +.+| +-+. |....
T Consensus 267 -Rt--IHtyHtEGAGGGHAPDiikv~~~~NvLPsSTNPT~PytvNT~~EhlDMlMVcHhL~p~ipeDvaFAeSRIR~eTI 343 (568)
T COG0804 267 -RT--IHTYHTEGAGGGHAPDIIKVAGQPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPRIPEDVAFAESRIRPETI 343 (568)
T ss_pred -ce--eEEeeccCCCCCCccHHHHHccCCCcCcCCCCCCCCcccccHHHhhhhhhhhccCCCCCcchhhhhhhccchhhh
Confidence 11 2333321 11122222222111 1111 1110 11111
Q ss_pred ccHHHHHHcCCeEEEecCCCCCCC-CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCcc
Q 017968 211 APIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 289 (363)
Q Consensus 211 ~~~~~~l~~G~~~~lgTD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G 289 (363)
.+-.-+.+-|..-+++||...... +--....++.+....+.+..+........++...+.+...|+|||-.-|+++.+|
T Consensus 344 AAEdiLhDmGafSmisSDSQAMGRvGEvi~RtwQtA~kmK~qrG~L~~d~~~nDN~RvkRYiaKyTINPAIthGis~~vG 423 (568)
T COG0804 344 AAEDILHDMGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGALPEDAGGNDNFRVKRYIAKYTINPAITHGISHEVG 423 (568)
T ss_pred hHHHHHhhccceEEeccchHhhhccchhhhhHHHHHHHHHHhcCCCCCCCCCCccHHHhhhhhheecCHHHhcccchhcc
Confidence 222335678999999999876542 2234566666666666665555444434568889999999999999999999999
Q ss_pred ccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEE
Q 017968 290 SLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 340 (363)
Q Consensus 290 ~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 340 (363)
++++||.||||++++.- .+.++..|+++|-+.+.
T Consensus 424 SvEvGK~ADlVLW~PaF-----------------FGvKP~~vlkgG~ia~a 457 (568)
T COG0804 424 SVEVGKLADLVLWDPAF-----------------FGVKPELVLKGGMIAWA 457 (568)
T ss_pred ceeccceeeeeeechhh-----------------cCCCcceEEecceeeee
Confidence 99999999999999861 12588899999987764
No 113
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.40 E-value=8.1e-12 Score=112.48 Aligned_cols=79 Identities=38% Similarity=0.508 Sum_probs=59.5
Q ss_pred cCcccHHHHHHcCCeEEEecCCCCCC--CCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 208 LGFAPIKEMLHADICVSLGTDGAPSN--NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 208 ~~~~~~~~~l~~G~~~~lgTD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
.....+.+++++|++++++||+.++. ....++......... .+++++++++++|.|||++||++
T Consensus 224 ~~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~~--------------~gl~~~~al~~~T~~pA~~lgl~ 289 (304)
T PF13147_consen 224 EDRAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAVR--------------AGLSPEEALRAATSNPARILGLD 289 (304)
T ss_dssp HHHHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHHH--------------TSSTHHHHHHHHTHHHHHHTTBT
T ss_pred hhhHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHhh--------------cCCCHHHHHHHHHHHHHHHhCCC
Confidence 34667789999999999999998753 123344333222111 25899999999999999999997
Q ss_pred CCccccCCCCcccEE
Q 017968 286 NDIGSLEAGKKADMV 300 (363)
Q Consensus 286 ~~~G~i~~G~~ADlv 300 (363)
+++|+|++|++||||
T Consensus 290 ~~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 290 DDKGSIAPGKDADLV 304 (304)
T ss_dssp TTSSSTSTTSB-EEE
T ss_pred CCCccCCCCCCCCcC
Confidence 789999999999997
No 114
>PTZ00124 adenosine deaminase; Provisional
Probab=99.39 E-value=4.6e-11 Score=109.33 Aligned_cols=239 Identities=15% Similarity=0.126 Sum_probs=150.3
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecC-C--------cCCHH----HHHH----HHH--HcCCeEE
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA-G--------GQHVS----EMAK----AVE--LLGLRAC 62 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~-~--------~~~~~----~~~~----~~~--~~gir~~ 62 (363)
+||+.+.+......+++|++..++..+.++.+.||..+--. . ..+.+ .+.+ +.. +.|+...
T Consensus 86 ~fl~~f~~~~~vl~t~~dl~r~a~e~~~d~~~dgV~Y~Eir~~P~~~~~~~gl~~~~vv~av~~g~~~a~~~~~~gI~~~ 165 (362)
T PTZ00124 86 EFVEKAIRVADIFNDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKHNLDIDLIHQAIVKGIKEAVELLDHKIEVG 165 (362)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEcCchhhhcCCCCCHHHHHHHHHHHHHHHHhccCCCceEe
Confidence 45666666666678999999999999999999999886421 1 11222 2222 222 3566655
Q ss_pred EecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccC
Q 017968 63 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 142 (363)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 142 (363)
+..+.+... +.+. ..+..++..++. ...|+ ++..+.+.. ...+..+++.|++.|+++.+|++|
T Consensus 166 lI~~~~R~~----------~~e~-a~e~~~~a~~~~---~~vvG--iDLaG~E~~-~~~f~~~f~~Ar~~Gl~~t~HaGE 228 (362)
T PTZ00124 166 LLCIGDTGH----------DAAP-IKESADFCLKHK---ADFVG--FDHAGHEVD-LKPFKDIFDYVREAGVNLTVHAGE 228 (362)
T ss_pred EEEEecCCC----------CHHH-HHHHHHHHHhcc---CCeEE--EeccCCCCC-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence 555544321 1222 223333333332 23344 444443332 356889999999999999999998
Q ss_pred ChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC--hhHHHHHHhCCCeEEEChhhhcccc-----CcccHHH
Q 017968 143 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----GFAPIKE 215 (363)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~v~~~p~~~~~~~-----~~~~~~~ 215 (363)
..... ...+.......+++ .-+.|+.++. ++.++.++++++.+++||+||..+. ...|++.
T Consensus 229 ~~~~~-----------~~~~v~~ai~~l~~-~RIGHG~~~~~d~~l~~~l~~~~I~lEvCPtSN~~~~~v~~~~~HPi~~ 296 (362)
T PTZ00124 229 DVTLP-----------NLNTLYSAIQVLKV-KRIGHGIRVAESQELIDMVKEKDILLEVCPISNVLLNNAKSMDTHPIRK 296 (362)
T ss_pred CCCCC-----------cchhHHHHHHHhCC-CccccccccCCCHHHHHHHHHcCCeEEECCcchhhhhcCCchhhHHHHH
Confidence 52110 00111122222222 2468999985 6669999999999999999997762 2478999
Q ss_pred HHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 216 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 216 ~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
++++|++++|+||.+... +.++..++..+.. ..+++.+++.++ +.|+.+...++
T Consensus 297 l~~~Gv~v~InTDDp~~~-~t~l~~Ey~~~~~--------------~~gls~~~l~~l-~~nai~asF~~ 350 (362)
T PTZ00124 297 LYDAGVKVSVNSDDPGMF-LTNINDDYEELYT--------------HLNFTLADFMKM-NEWALEKSFLD 350 (362)
T ss_pred HHHCCCcEEEeCCCcccc-CCChhHHHHHHHH--------------HcCCCHHHHHHH-HHHHHHHhcCC
Confidence 999999999999998753 3457777655431 125888886665 56777665543
No 115
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=99.38 E-value=4.9e-11 Score=109.05 Aligned_cols=162 Identities=12% Similarity=0.075 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHH--hCCCCCCeeEEEeecCChhHHHHHHhC--
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK--IEFLQNNLLSAHTVWVNHTEIGLLSRA-- 193 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~-- 193 (363)
+...+.++++.+++.|+++.+|+.+........... .......+.. ....+.+.+++|... .+.++.+++.
T Consensus 113 dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~e---~~a~~~~i~~lA~~~~~~~~~i~H~st--~~~~~~i~~a~~ 187 (341)
T TIGR00856 113 DIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDRE---ARFIESVLEPLRQRFPALKVVLEHITT--KDAIDYVEDGNN 187 (341)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCCcccccch---hhhhHHHHHHHHHHccCCeEEEEecCc--HHHHHHHHHcCC
Confidence 447889999999999999999997652111110000 0000111111 112233444444433 2334444432
Q ss_pred CCeEEEChhhhcc---------------------c-cCcccHHHHHHcCCeE-EEecCCCCCCC----------CCcHHH
Q 017968 194 GVKVSHCPASAMR---------------------M-LGFAPIKEMLHADICV-SLGTDGAPSNN----------RMSIVD 240 (363)
Q Consensus 194 g~~v~~~p~~~~~---------------------~-~~~~~~~~~l~~G~~~-~lgTD~~~~~~----------~~~~~~ 240 (363)
.++.++||++-.. . .+...+++++..|.++ +++|||+|+.. +..-.+
T Consensus 188 ~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~~~~~~G~~g~e 267 (341)
T TIGR00856 188 RLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKESSCGCAGCFSAP 267 (341)
T ss_pred CEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCCCCCCCCcccHH
Confidence 3788899966321 1 1234678899999999 69999999842 111111
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEc
Q 017968 241 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 303 (363)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d 303 (363)
..+..++. . . ...++++++++++|.||||++|+ ++ | +|||+|++
T Consensus 268 -~~l~~~~~-~--------~-~~~~~l~~~v~~~s~nPAk~~gl-~~-~------dAdi~~~~ 311 (341)
T TIGR00856 268 -TALPSYAE-V--------F-EEMNALENLEAFCSDNGPQFYGL-PV-N------STKIELVK 311 (341)
T ss_pred -HHHHHHHH-H--------H-hcCCCHHHHHHHHhHhHHHHhCC-CC-C------CceEEEEe
Confidence 11111111 0 1 11489999999999999999999 33 4 89999995
No 116
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=99.34 E-value=3.4e-10 Score=103.46 Aligned_cols=247 Identities=11% Similarity=-0.004 Sum_probs=149.6
Q ss_pred ccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCC-c----------CCHHHHHHH--------HHHc--CCeE
Q 017968 3 WLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G----------QHVSEMAKA--------VELL--GLRA 61 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~-~----------~~~~~~~~~--------~~~~--gir~ 61 (363)
|++.+.+......++++++..++..+.++.+.||..+--.. + ...+..+++ .... |+..
T Consensus 51 fl~~f~~~~~~l~~~~~~~~~~~~~~~d~~~dgV~Y~Eir~~P~~~~~~~~~g~~~~~v~~av~~~~~~~~~~~~~~i~v 130 (345)
T cd01321 51 FEQIFDIIDGLLTYLPIFRDYYRRLLEELYEDNVQYVELRSSFSPLYDLDGREYDYEETVQLLEEVVEKFKKTHPDFIGL 130 (345)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCCEEEEEeecchHHHHccCCCCCHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 45555556666778999999999999999999998865321 1 122222211 1112 4444
Q ss_pred EEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCC-CCCCeEEEeccCccc--cCCHHHHHHHHHHHHHcC--Cee
Q 017968 62 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA-ADGRIRIWFGIRQIM--NATDRLLLETRDMAREFK--TGI 136 (363)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~--~~~~~~l~~~~~~a~~~g--~~v 136 (363)
.+..+..+.. +.+.. .+..+....++.. ....+. ++..+.+ ..+...+..+++.|++.| +++
T Consensus 131 ~lI~~~~R~~----------~~e~~-~e~~~~a~~~~~~~~~~VvG--idL~G~E~~~~~~~~f~~~f~~ar~~g~~l~~ 197 (345)
T cd01321 131 KIIYATLRNF----------NDSEI-KESMEQCLNLKKKFPDFIAG--FDLVGQEDAGRPLLDFLPQLLWFPKQCAEIPF 197 (345)
T ss_pred EEEEEecCCC----------CHHHH-HHHHHHHHHHHHhCCCeEEE--EecCCCccCCCCHHHHHHHHHHHHHhCCCCce
Confidence 4444444321 12222 2222222222111 112233 4444433 345778889999999999 999
Q ss_pred eEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC--hhHHHHHHhCCCeEEEChhhhcccc-----C
Q 017968 137 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----G 209 (363)
Q Consensus 137 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~v~~~p~~~~~~~-----~ 209 (363)
.+|++|...... .......+.+ .++. .-+.|+..+. ++-++.++++++.+++||+||..+. .
T Consensus 198 t~HAGE~~~~~~---------~~~~~v~~al-~lg~-~RIGHG~~~~~dp~ll~~l~~~~I~lEvCPtSN~~~~~v~~~~ 266 (345)
T cd01321 198 FFHAGETNGDGT---------ETDENLVDAL-LLNT-KRIGHGFALPKHPLLMDLVKKKNIAIEVCPISNQVLGLVSDLR 266 (345)
T ss_pred EeecCCCcCCCC---------CChhHHHHHH-HhCC-CcCccccccCcCHHHHHHHHHcCCeEEECcchhhhhccccchh
Confidence 999998652100 0011112222 2332 2468999886 5568999999999999999998652 3
Q ss_pred cccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 210 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 210 ~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
..|++.++++|++++|+||.+......++..+...+.... ...+++.++ +..++.|+.+...++
T Consensus 267 ~HPl~~ll~~Gv~vtinTDDp~~f~t~~l~~Ey~~~~~~~-----------g~~~l~~~~-l~~l~~nsi~~sF~~ 330 (345)
T cd01321 267 NHPAAALLARGVPVVISSDDPGFWGAKGLSHDFYQAFMGL-----------APADAGLRG-LKQLAENSIRYSALS 330 (345)
T ss_pred hChHHHHHHCCCeEEEeCCCcchhCCCCchHHHHHHHHHh-----------ccCCCCHHH-HHHHHHHHHHHHCCC
Confidence 4689999999999999999986532225667665543211 011377888 555677888776664
No 117
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=99.32 E-value=5.9e-10 Score=100.58 Aligned_cols=241 Identities=10% Similarity=0.007 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHhCCceEeecCCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHH-HHH
Q 017968 20 SYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELY 94 (363)
Q Consensus 20 ~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 94 (363)
-+..+...+.++.+.||||+++.+.. +.....+.+++.|++.+...+.+.... .|........+...+... ++.
T Consensus 30 ~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G~hp~~~-~~~~~~~~~~~~l~~~~~~~l~ 108 (293)
T cd00530 30 DVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATGFYKDAF-YPEWVRLRSVEELTDMLIREIE 108 (293)
T ss_pred hHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecccCCCcc-ChHHHhhCCHHHHHHHHHHHHH
Confidence 34577888899999999999998753 467778888889998877666553210 011011111122222222 122
Q ss_pred HHhcCCC--CCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCC
Q 017968 95 AKHHHAA--DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 172 (363)
Q Consensus 95 ~~~~~~~--~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (363)
+.+.... .+.++-....+.......+.+++.+++|+++|+|+++|+.+..... ....+.+++.|+...
T Consensus 109 ~~~~~~~i~~~~IGEigld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~~----------~~~l~~l~~~g~~~~ 178 (293)
T cd00530 109 EGIEGTGIKAGIIKEAGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGLTMG----------LEQLRILEEEGVDPS 178 (293)
T ss_pred hccccCCcCceEEEEeecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCcccc----------HHHHHHHHHcCCChh
Confidence 1111100 0112111112212222345788999999999999999997541110 124556666676555
Q ss_pred CeeEEEeec-CChhHHHHHHhCCCeEEEChhhhcc---c----cCcccHHHHHHcCC--eEEEecCCCCCCC-----CCc
Q 017968 173 NLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAMR---M----LGFAPIKEMLHADI--CVSLGTDGAPSNN-----RMS 237 (363)
Q Consensus 173 ~~~~~H~~~-~~~~~~~~~~~~g~~v~~~p~~~~~---~----~~~~~~~~~l~~G~--~~~lgTD~~~~~~-----~~~ 237 (363)
+.++.||.. .+.+.+..+.+.|+.+.++...... . .....++++++.|. .+.++||.+.... ..+
T Consensus 179 ~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~~~ 258 (293)
T cd00530 179 KVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKDKIFGYPSDETRADAVKALIDEGYGDRLLLSHDVFRKSYLEKRYGGH 258 (293)
T ss_pred heEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCcccccCCCCHHHHHHHHHHHHHCCCcCCEEEeCCcCchhhhhhccCCC
Confidence 568899984 5567788899999999887543221 0 12344778888887 6799999753210 001
Q ss_pred -HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhc
Q 017968 238 -IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 282 (363)
Q Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~l 282 (363)
+..-+....... ...+++.+++.++.+.||+++|
T Consensus 259 ~~~~~~~~~~~~~-----------~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 259 GYDYILTRFIPRL-----------RERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred ChHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHCHHHhC
Confidence 111011111111 1235899999999999999875
No 118
>PRK05451 dihydroorotase; Provisional
Probab=99.30 E-value=9.6e-11 Score=107.62 Aligned_cols=162 Identities=11% Similarity=0.119 Sum_probs=98.8
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH-HHHHHh--CCCCCCeeEEEeecCChhHHHHHHh--
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKI--EFLQNNLLSAHTVWVNHTEIGLLSR-- 192 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~-- 192 (363)
+.+.+.++++.+.+.|+++.+|+++......... .....+ ..+... ...+.+.+++|+. +.+.++.+++
T Consensus 116 dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~----~e~~~~~~~l~~lA~~~pg~~lhI~Hls--t~~~~e~i~~a~ 189 (345)
T PRK05451 116 DIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFD----REAVFIDRVLEPLRRRFPKLKIVFEHIT--TKDAVDYVREAN 189 (345)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCccccccc----chHHHHHHHHHHHHHhcCCCcEEEEecC--cHHHHHHHHhcC
Confidence 6778999999999999999999976332111000 000001 111111 1113355556653 2344555554
Q ss_pred CCCeEEEChhhhc---------------------cc-cCcccHHHHHHcCCeE-EEecCCCCCCC-------CC-cHHHH
Q 017968 193 AGVKVSHCPASAM---------------------RM-LGFAPIKEMLHADICV-SLGTDGAPSNN-------RM-SIVDE 241 (363)
Q Consensus 193 ~g~~v~~~p~~~~---------------------~~-~~~~~~~~~l~~G~~~-~lgTD~~~~~~-------~~-~~~~~ 241 (363)
.++++++||++-. |. .+...+++.+..|.++ +|+|||+|+.. +. .++..
T Consensus 190 ~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~ 269 (345)
T PRK05451 190 DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSA 269 (345)
T ss_pred CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhH
Confidence 3678889996632 11 2345688899999999 89999999742 11 23332
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccccCCC
Q 017968 242 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 294 (363)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G 294 (363)
......+.... .. ..++++++++++.||||++|+.++||.|.+|
T Consensus 270 ~~g~~~~~~~~--------~~-~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~ 313 (345)
T PRK05451 270 PAALELYAEVF--------EE-AGALDKLEAFASLNGPDFYGLPRNTDTITLV 313 (345)
T ss_pred HHHHHHHHHHH--------Hc-CCCHHHHHHHHhHHHHHHhCCCCCCCeEEEE
Confidence 21111111110 01 1389999999999999999998889999888
No 119
>PLN02599 dihydroorotase
Probab=99.24 E-value=4.7e-10 Score=102.88 Aligned_cols=156 Identities=14% Similarity=0.109 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH-HHH--HHhCCCCCCeeEEEeecCChhH-HHHHHh--
Q 017968 119 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFL--DKIEFLQNNLLSAHTVWVNHTE-IGLLSR-- 192 (363)
Q Consensus 119 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~H~~~~~~~~-~~~~~~-- 192 (363)
.+.+.++++.+++.|+++.+|+.......+.... ....+ ..+ ......+.+. |..|++..+ ++.+++
T Consensus 135 ~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~----E~~~i~r~l~~~la~~~g~kI---~i~HiSt~~~ve~v~~ak 207 (364)
T PLN02599 135 LGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDR----EKVFIDTILAPLVQKLPQLKI---VMEHITTMDAVEFVESCG 207 (364)
T ss_pred HHHHHHHHHHHHhcCCEEEEecCCCccccccccc----HHHHHHHHHHHHHHhccCCeE---EEEecChHHHHHHHHhcc
Confidence 5788999999999999999999874431111110 00001 112 1112334344 444555432 444443
Q ss_pred C-CCeEEEChhhhcc---------------------c-cCcccHHHHHHcCCe-EEEecCCCCCCCC-------C-cHHH
Q 017968 193 A-GVKVSHCPASAMR---------------------M-LGFAPIKEMLHADIC-VSLGTDGAPSNNR-------M-SIVD 240 (363)
Q Consensus 193 ~-g~~v~~~p~~~~~---------------------~-~~~~~~~~~l~~G~~-~~lgTD~~~~~~~-------~-~~~~ 240 (363)
. .++.++||++-.. . .+...+++++..|.+ ++|||||+|+... . .++.
T Consensus 208 ~~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g~~Gi~~ 287 (364)
T PLN02599 208 DGNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEASCGCAGIYS 287 (364)
T ss_pred CCCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcCCCCCCCccc
Confidence 2 5788999976421 1 224568889999995 8999999997521 0 1111
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCccc
Q 017968 241 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 290 (363)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~~~G~ 290 (363)
.......+... . ...+ +++++++++|.|||+++|++.++|.
T Consensus 288 ~~~~l~~l~~~-------~-~~~g-~l~~l~~~~S~npA~~~gL~~~kg~ 328 (364)
T PLN02599 288 APVALSLYAKA-------F-EEAG-ALDKLEAFTSFNGPDFYGLPRNTST 328 (364)
T ss_pred HHHHHHHHHHH-------H-HhcC-CHHHHHHHHhHHHHHHhCCCCCCCe
Confidence 10001111110 0 1113 7899999999999999999545664
No 120
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=99.20 E-value=2e-09 Score=96.69 Aligned_cols=238 Identities=18% Similarity=0.167 Sum_probs=155.9
Q ss_pred CccccccccCcCCCCchhHHHHHHHHHHHHHhCCceEee---cCC-----cCCH--------HHHHHHHHHcCCeEEEec
Q 017968 2 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA---EAG-----GQHV--------SEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~---d~~-----~~~~--------~~~~~~~~~~gir~~~~~ 65 (363)
+||+.+.++.....+++|++..+...+..++..|+-... +.. ..+. +.+.++.++.|+..-...
T Consensus 65 ~fl~~~y~~~~v~~~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p~~~t~~~l~~~~~~e~~~~~~~~~~~~~gi~s~li~ 144 (345)
T COG1816 65 EFLEKYYRGASVLRTEEDFYRLAYEYLEDAAADNVVYAEIRFDPYLHTKRGLSVDTVVEGLIAGFRPAERDFGIHSKLIV 144 (345)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhcCCeEEEEEeCcchhhhccCCHHHHHHHHHHHHHHHhhccCCccceEE
Confidence 567888888888899999999999999999999998754 221 1222 233445667777765544
Q ss_pred ccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCe-EEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCCh
Q 017968 66 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 144 (363)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 144 (363)
+..... .++...+.. +....+.. ..+ .+.+++. ....+++.+..+++.++..|+.+..|++|..
T Consensus 145 ~~~r~~----------~~e~~~~~~-~~a~~~~~---~~~~~~~l~~~-e~~~p~~~f~~~f~~~r~~gl~lt~HaGE~~ 209 (345)
T COG1816 145 CLLRHL----------GFESADEEL-ELALRYRD---KLVTGVGLAGS-ESGYPPELFVSLFKLARDNGLKLTIHAGEAG 209 (345)
T ss_pred EEEeec----------CHHHHHHHH-HHHhhccc---ccCccCCCCcc-cccCCHHHHHHHHHHHHHcCceEEEeccccC
Confidence 443321 233333333 33333221 112 2222222 2345678899999999999999999999755
Q ss_pred hhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChh--HHHHHHhCCCeEEEChhhhccc-----cCcccHHHHH
Q 017968 145 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT--EIGLLSRAGVKVSHCPASAMRM-----LGFAPIKEML 217 (363)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~--~~~~~~~~g~~v~~~p~~~~~~-----~~~~~~~~~l 217 (363)
.... ..+.+...+. ..+.|+.....+ -+.++++.++.+++||.||..+ -...|++++.
T Consensus 210 ~~~~-----------i~~al~~~~~----~rI~HGi~~~~d~~L~~~l~~~qI~levCP~SNi~~~~v~~~~~hPf~~~~ 274 (345)
T COG1816 210 GPES-----------IRDALDLLGA----ERIGHGIRAIEDPELLYRLAERQIPLEVCPLSNIQLGVVPSLAKHPFKKLF 274 (345)
T ss_pred CcHH-----------HHHHHHHhch----hhhccccccccCHHHHHHHHHhCCeeEECCcchhhcccccchhhCcHHHHH
Confidence 4221 2222222222 136888876643 4788999999999999999655 2346899999
Q ss_pred HcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 218 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 218 ~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
++|++++++||.++... ..+..+...+.... +++..+ +..++.|.=+.-+++
T Consensus 275 d~Gv~VsLnTDdp~~f~-~~l~~Ey~~aa~~~--------------~l~~~d-l~~~arnav~~af~~ 326 (345)
T COG1816 275 DAGVKVSLNTDDPLYFG-TPLIEEYLVAAQIY--------------GLSRED-LCELARNAVEAAFIS 326 (345)
T ss_pred HcCCceEEcCCChhhcC-CchHHHHHHHHHHh--------------CCCHHH-HHHHHHHHHHHccCC
Confidence 99999999999998753 35666666554332 267777 555667776666654
No 121
>PRK09875 putative hydrolase; Provisional
Probab=99.16 E-value=2e-08 Score=89.21 Aligned_cols=240 Identities=13% Similarity=0.046 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHH
Q 017968 21 YISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 96 (363)
Q Consensus 21 ~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (363)
+..+..-+.++.+.|+.|++|+.+ .++..+.+..++.|++++.+.+.+...+ +|+.....+.++..+...+.+..
T Consensus 33 ~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~~~-~p~~~~~~~~e~la~~~i~ei~~ 111 (292)
T PRK09875 33 YAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAF-FPEHVATRSVQELAQEMVDEIEQ 111 (292)
T ss_pred HHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCCcc-CCHHHhcCCHHHHHHHHHHHHHH
Confidence 445555567778899999999764 6688999999999999999888875432 34444433444444444444444
Q ss_pred hcCC---CCCCe-EEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCC
Q 017968 97 HHHA---ADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 172 (363)
Q Consensus 97 ~~~~---~~~~v-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (363)
.... ..+.+ +++.+.......-.+.++.+++.+++.|+|+++|........ ..++.+++.|+--.
T Consensus 112 Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~-----------e~l~il~e~Gvd~~ 180 (292)
T PRK09875 112 GIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGL-----------EQLALLQAHGVDLS 180 (292)
T ss_pred hhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccchH-----------HHHHHHHHcCcCcc
Confidence 3221 12344 332222222222245678888888999999999975432111 24566777777666
Q ss_pred CeeEEEeecCC-hhHHHHHHhCCCeEEEChhh-hc-cc--cCcccHHHHHHcCC--eEEEecCCCCCCC-----CCcHHH
Q 017968 173 NLLSAHTVWVN-HTEIGLLSRAGVKVSHCPAS-AM-RM--LGFAPIKEMLHADI--CVSLGTDGAPSNN-----RMSIVD 240 (363)
Q Consensus 173 ~~~~~H~~~~~-~~~~~~~~~~g~~v~~~p~~-~~-~~--~~~~~~~~~l~~G~--~~~lgTD~~~~~~-----~~~~~~ 240 (363)
++++.|+.... .+.+..+.+.|+.+.++... .. .. .....+..+.+.|. .+.+++|...... +..+..
T Consensus 181 rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g~~~~~pd~~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~~~gg~G~~~ 260 (292)
T PRK09875 181 RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDY 260 (292)
T ss_pred eEEEeCCCCCCCHHHHHHHHHcCCEEEeccCCCcccCCHHHHHHHHHHHHhcCCCCeEEEeCCCCCcccccccCCCChhH
Confidence 78999986543 45578888999999985311 11 00 22455667778883 8999999754311 111111
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhcc
Q 017968 241 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 283 (363)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg 283 (363)
.+... +.++ ...+++-+++=+|...||+|+|+
T Consensus 261 i~~~~--ip~L---------~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 261 LLTTF--IPQL---------RQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHHHH--HHHH---------HHcCCCHHHHHHHHHHCHHHHhC
Confidence 11111 1111 12368999999999999999874
No 122
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=99.12 E-value=3.3e-09 Score=97.38 Aligned_cols=225 Identities=20% Similarity=0.233 Sum_probs=138.8
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecC---------Cc-CCHH--------HHHHHHHHcCCeEEEecccccCCCCCCcc
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEA---------GG-QHVS--------EMAKAVELLGLRACLVQSTMDCGEGLPAS 77 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~---------~~-~~~~--------~~~~~~~~~gir~~~~~~~~~~~~~~~~~ 77 (363)
++++++..++..+.++.+.||..+--. ++ ...+ .+.++..+.++..-+..+....
T Consensus 72 ~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a~~~~~i~~~li~~~~R~------- 144 (331)
T PF00962_consen 72 TPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRAEKEFGIKVRLIISVLRH------- 144 (331)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEETT-------
T ss_pred cHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhcccccccccccccccccc-------
Confidence 899999999999999999999997532 11 1222 2334555667666555444432
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCC
Q 017968 78 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 157 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~ 157 (363)
.......+..++..++.. ...|++.+..... ......+..+++.|++.|+++.+|++|.....
T Consensus 145 ----~~~~~~~~~~~~~~~~~~--~~vvG~dl~g~E~-~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~---------- 207 (331)
T PF00962_consen 145 ----FPDEWAEEIVELASKYPD--KGVVGFDLAGDED-GGPPLKFAPAFRKAREAGLKLTVHAGETGGPE---------- 207 (331)
T ss_dssp ----STHHHHHHHHHHHHHTTT--TTEEEEEEESSTT-STTGGGHHHHHHHHHHTT-EEEEEESSSSTHH----------
T ss_pred ----chHHHHHHHHHHHhhccc--ceEEEEEecCCcc-cCchHHHHHHHhhhcccceeecceecccCCcc----------
Confidence 134445555666655542 1345544433222 22334488899999999999999999876422
Q ss_pred CChHHHHHHhCCCCCCeeEEEeecCCh--hHHHHHHhCCCeEEEChhhhcccc-----CcccHHHHHHcCCeEEEecCCC
Q 017968 158 HGTVTFLDKIEFLQNNLLSAHTVWVNH--TEIGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGA 230 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~g~~v~~~p~~~~~~~-----~~~~~~~~l~~G~~~~lgTD~~ 230 (363)
........++.. -+.|+.++.. +-++.++++++.+++||+||..+. ...|++++++.|++++|+||.+
T Consensus 208 ----~~~~ai~~l~~~-RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~~~~~~~~~~~hP~~~~~~~gv~v~i~TDd~ 282 (331)
T PF00962_consen 208 ----HIRDAILLLGAD-RIGHGVRLIKDPELLELLAERQIPIEVCPTSNVQLGAVPSYEEHPLRKLLDAGVPVSINTDDP 282 (331)
T ss_dssp ----HHHHHHHTST-S-EEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHHHTTSSSTGGG-CHHHHHHTT-EEEE--BSH
T ss_pred ----cccchhhhccce-eecchhhhhhhhHHHHHHHHhCCCeeeCCCcCcccceeeecchhHHHHHHHcCCceeccCCCc
Confidence 222222334433 5799998764 447899999999999999997651 3469999999999999999987
Q ss_pred CCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 231 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
..- +.++..+...+.... +++.++ +..+..|+.+.-.++
T Consensus 283 ~~~-~~~l~~ey~~~~~~~--------------~l~~~~-l~~l~~nsi~~sf~~ 321 (331)
T PF00962_consen 283 GVF-GTTLSDEYYLAAEAF--------------GLSLAD-LKQLARNSIEASFLS 321 (331)
T ss_dssp HHH-T-SHHHHHHHHHHHH--------------T--HHH-HHHHHHHHHHCSSS-
T ss_pred ccc-CCCcHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHHcCC
Confidence 531 234667665554322 377877 555666887776654
No 123
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=98.98 E-value=2e-07 Score=88.58 Aligned_cols=238 Identities=11% Similarity=0.034 Sum_probs=136.6
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCceEeecCCc---------C--C----HHHHH---HHHHHc---CCeEEEecccccCC
Q 017968 13 SNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---------Q--H----VSEMA---KAVELL---GLRACLVQSTMDCG 71 (363)
Q Consensus 13 ~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~---------~--~----~~~~~---~~~~~~---gir~~~~~~~~~~~ 71 (363)
...+++++...++..+.++.+.||..+--... . . ++.+. +..+.. ++..-+.++..+..
T Consensus 188 ll~y~p~~~~~~~~~l~d~~~DgV~Y~ElR~~p~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~fi~~rlI~~~~R~~ 267 (479)
T TIGR01431 188 LLFYAPSWRDYYYRALEEFYADNVQYLELRSTLFILYELEGTSHDEEDSVRIYKEVTEKFMAEHPDFIGSKLIYSPLRNK 267 (479)
T ss_pred HHcCHHHHHHHHHHHHHHHHHcCCEEEEEEecCchHhhcCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEccCCC
Confidence 44678888889999999999999998752111 1 1 11122 222221 23333333333211
Q ss_pred CCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccc--cCCHHHHHHHHH-HHHHcCCeeeEeccCChhhHH
Q 017968 72 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM--NATDRLLLETRD-MAREFKTGIHMHVAEIPYENQ 148 (363)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~l~~~~~-~a~~~g~~v~~H~~~~~~~~~ 148 (363)
+.+...+. .+...+++....+. -++++..+.+ ..+...+...+. .+++.|+++.+|++|......
T Consensus 268 ----------~~~~~~~~-~~~a~~~k~~~p~~-vvGfDL~G~E~~g~pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~ 335 (479)
T TIGR01431 268 ----------DKEELDNY-IKVAMELKEKYPDF-VAGFDLVGQEDKGRSLLDFIDALLGPSDKEKLPYFFHAGETNWQGT 335 (479)
T ss_pred ----------CHHHHHHH-HHHHHHHHhhCCCe-EEEEeccCCCCCCCCHHHHHHHHHHHHHhCCCCEEEecCCcCCCCC
Confidence 22222222 22222222111122 2334443332 334555555554 566699999999998752110
Q ss_pred HHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC--hhHHHHHHhCCCeEEEChhhhcccc-----CcccHHHHHHcCC
Q 017968 149 VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADI 221 (363)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~g~~v~~~p~~~~~~~-----~~~~~~~~l~~G~ 221 (363)
.......+.+ +++.. -+.|+..+. +.-++.++++++.+++||.||..+. ...|+..++++|+
T Consensus 336 ---------~~d~nl~dAI-lLg~~-RIGHG~~l~~~P~l~~~vke~~I~lEvCP~SN~~l~~v~~~~~HPl~~lla~Gv 404 (479)
T TIGR01431 336 ---------TVDENLIDAL-LLNTT-RIGHGFALVKHPLVLQMLKERNIAVEVNPISNQVLQLVADLRNHPCAYLFADNY 404 (479)
T ss_pred ---------CchhHHHHHH-HcCCc-cccCcccccCCHHHHHHHHHhCCeEEECccchhhhcccCCcccChHHHHHHCCC
Confidence 0122233344 44433 469999887 5668999999999999999997652 2468999999999
Q ss_pred eEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 222 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 222 ~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
+++|+||.+..-....+..+...+..... ...+++.+ ++.+..|..+.-.++
T Consensus 405 pv~InSDDP~~~~~t~Ls~ef~~a~~~~~-----------~~~~~l~~-L~~la~NSi~~Sfl~ 456 (479)
T TIGR01431 405 PMVISSDDPAFWGATPLSHDFYIAFMGLA-----------SAKADLRT-LKQLALNSIKYSALS 456 (479)
T ss_pred cEEEeCCCccccCCCCchHHHHHHHHHhc-----------ccCCCHHH-HHHHHHHHHHHHCCC
Confidence 99999999865322235555554432110 11245544 677777888776664
No 124
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=98.85 E-value=8.5e-08 Score=81.15 Aligned_cols=58 Identities=26% Similarity=0.367 Sum_probs=54.1
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 264 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 264 ~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+.|.+-+++.+|..||+.||+++.||.|..|.+||||++|.+ ..|..||+.|+.|++.
T Consensus 348 gCs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~--------------------l~V~aT~isG~~V~~a 405 (407)
T KOG3892|consen 348 GCSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDS--------------------LHVQATYISGELVWQA 405 (407)
T ss_pred CCcHHHHHhhhccChHHhhccccccccccccccCceEEEccc--------------------eEEEEEEEccEEEEec
Confidence 578999999999999999999999999999999999999986 4899999999999864
No 125
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.83 E-value=2.9e-07 Score=82.47 Aligned_cols=238 Identities=11% Similarity=0.027 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHH
Q 017968 21 YISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 96 (363)
Q Consensus 21 ~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (363)
...+..-++++-..|+.|++|+.+ .++..+.+..+..|+.++.+.+.+-..+ .|+.....+.++..+.+...+..
T Consensus 37 ~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG~y~~~~-~p~~~~~~s~e~la~~~i~Ei~~ 115 (308)
T PF02126_consen 37 VEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTGFYKEPF-YPEWVREASVEELADLFIREIEE 115 (308)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEEE-SGGC-SCHHHHTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCCCCcccc-CChhhhcCCHHHHHHHHHHHHHh
Confidence 445556667888899999999864 6788999999999999998887774321 23322222333333333333333
Q ss_pred hcC---CCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCC
Q 017968 97 HHH---AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 173 (363)
Q Consensus 97 ~~~---~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (363)
-.. ...|.+|.+.+...........++.+.+..++.|+|+++|......... ..++.+.+.|+--.+
T Consensus 116 GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~----------e~~~il~e~Gv~~~r 185 (308)
T PF02126_consen 116 GIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGL----------EQLDILEEEGVDPSR 185 (308)
T ss_dssp -STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHH----------HHHHHHHHTT--GGG
T ss_pred cCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHH----------HHHHHHHHcCCChhH
Confidence 221 1124555533332222222346777778888999999999976552111 145677788876678
Q ss_pred eeEEEeecCChh-HHHHHHhCCCeEEEChh-----h-hc------cc--cCcccHHHHHHcCC--eEEEecCCCC---C-
Q 017968 174 LLSAHTVWVNHT-EIGLLSRAGVKVSHCPA-----S-AM------RM--LGFAPIKEMLHADI--CVSLGTDGAP---S- 232 (363)
Q Consensus 174 ~~~~H~~~~~~~-~~~~~~~~g~~v~~~p~-----~-~~------~~--~~~~~~~~~l~~G~--~~~lgTD~~~---~- 232 (363)
++++|+-...+. .+..+.++|+.+.+.-. . .. .. .....+..++++|. .+.+|.|..- .
T Consensus 186 vvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~~~g~~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~~~~ 265 (308)
T PF02126_consen 186 VVIGHMDRNPDLDYHRELADRGVYLEFDTIGREFSGKDKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRKSRLY 265 (308)
T ss_dssp EEETSGGGST-HHHHHHHHHTT-EEEETTTT-B-TTTTTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEEGSS
T ss_pred eEEeCCCCCCCHHHHHHHHhcCCEEEecCCcccccCcccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEecccccccccc
Confidence 899998744443 36677889999998543 1 10 00 22356788889997 7999999653 1
Q ss_pred CC-----CCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhc
Q 017968 233 NN-----RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 282 (363)
Q Consensus 233 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~l 282 (363)
.. +......- +...+. ..+++.+++=++...||+|+|
T Consensus 266 ~~gg~g~~~~~i~~~-fiP~L~------------~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 266 RYGGGGYGYIYILTR-FIPRLK------------ERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp SCCHHHHTTTHHHHT-HHHHHH------------HTTS-HHHHHHHHTHHHHHHH
T ss_pred ccCCCCccHHHHHHH-HHHHHH------------HcCCCHHHHHHHHHHCHHHHc
Confidence 00 11111111 111111 235889999999999999986
No 126
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.83 E-value=1.8e-06 Score=78.08 Aligned_cols=234 Identities=16% Similarity=0.155 Sum_probs=143.0
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCceEeecC--C-------c-CCH--------HHHHHHHHHcCCeEEEecccccCCCCC
Q 017968 13 SNMTEEDSYISTLLCGIELIHSGVTCFAEA--G-------G-QHV--------SEMAKAVELLGLRACLVQSTMDCGEGL 74 (363)
Q Consensus 13 ~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~--~-------~-~~~--------~~~~~~~~~~gir~~~~~~~~~~~~~~ 74 (363)
....+++++..++.+++++...||-.+.-. . + ... +...++-++.||-.-+.+++++.-
T Consensus 112 ll~~~~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~~~G~~t~e~~v~~~~~~~e~~~~~fpI~sklI~~~~R~~--- 188 (399)
T KOG1097|consen 112 LLIYAPAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYTADGDITPEDVVAIVIAALEKAKRDFPIKSKLIMCCIRHM--- 188 (399)
T ss_pred HHhhHHHHHHHHHHHHHHHHHcCceEEEEEccCchhhhcCCCCCHHHHHHHHHHHHHHHHHhCCCcceEEEeeccCC---
Confidence 345788899999999999999999986422 1 1 111 233456677787766666666532
Q ss_pred CcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccc--cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHh
Q 017968 75 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 152 (363)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~ 152 (363)
+ ++...+.+.+..+ .+.. .+.+-++++..+.+ .-+...+..+...+.+.|+++.+|++|.....
T Consensus 189 ~-------~e~~~e~v~~~~~-~~~~-~~~~VvGidL~G~e~~~~p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~----- 254 (399)
T KOG1097|consen 189 P-------PEVAEETVSEAKE-LNKL-FPNFVVGIDLVGQEDLGGPLSLFLEVLAKAPAKGIHLTFHAGETNGGA----- 254 (399)
T ss_pred C-------hHHHHHHHHHHHH-HHHh-CCCeEEEEecCCCCCCCCChhhhHHHHHhhhhcCCcEEEEccccCCCh-----
Confidence 1 2222222222222 1111 11223334444322 33456677777888889999999999874111
Q ss_pred hcCCCCChHHHHHHhCCCCCCeeEEEeecCChhH--HHHHHhCCCeEEEChhhhccc-----cCcccHHHHHHcCCeEEE
Q 017968 153 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRM-----LGFAPIKEMLHADICVSL 225 (363)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~g~~v~~~p~~~~~~-----~~~~~~~~~l~~G~~~~l 225 (363)
..++.+.+ +++. .-+.|+..+..++ +.++++.++.+++||.||.-+ ....|+.+++++|+++.|
T Consensus 255 ------~~v~~~LD--~l~~-~RIGHG~~l~~dp~L~~~~k~~nI~lEiCP~SN~vl~~v~d~rnhp~~~~~~~~vP~vI 325 (399)
T KOG1097|consen 255 ------SVVKNALD--LLGT-ERIGHGYFLTKDPELINLLKSRNIALEICPISNQVLGLVSDLRNHPVARLLAAGVPVVI 325 (399)
T ss_pred ------HHHHHHHH--hhCC-ccccCceeccCCHHHHHHHHhcCceEEEccchhhheeccccccccHHHHHHhCCCCEEE
Confidence 12222222 3432 3479999999877 889999999999999999655 235789999999999999
Q ss_pred ecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 226 GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 226 gTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
+||-+..-.+..+-.....+. ... .. +++.++ +..++.|..+..-++
T Consensus 326 ~sDDP~~f~~~~Lt~dfy~A~-~~~----------~~-~~~~~~-l~~la~nai~~S~l~ 372 (399)
T KOG1097|consen 326 NSDDPGFFGAAPLTLDFYLAF-LGI----------AP-NLDLRE-LKRLALNAIKYSFLS 372 (399)
T ss_pred eCCCcccccCccccHHHHHHH-Hhc----------cc-cCCHHH-HHHHHHHHhhhccCC
Confidence 999886522211222222221 111 11 466777 455666887776554
No 127
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.68 E-value=1.4e-06 Score=76.61 Aligned_cols=217 Identities=13% Similarity=0.073 Sum_probs=121.8
Q ss_pred HHHHHHhCCceEeecCCc--CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCC
Q 017968 27 CGIELIHSGVTCFAEAGG--QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 104 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~--~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (363)
.+.++...|+++++.++. .+.+...+.++..+ +.+.+.++. | .+........+++..+.++ . .+.
T Consensus 20 ~~~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~-~i~~~~Gih------P-~~~~~~~~~~~~~l~~~l~---~--~~~ 86 (252)
T TIGR00010 20 VIERAKAAGVTAVVAVGTDLEDFLRALELAEKYP-NVYAAVGVH------P-LDVDDDTKEDIKELERLAA---H--PKV 86 (252)
T ss_pred HHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHCC-CEEEEEEeC------c-chhhcCCHHHHHHHHHHcc---C--CCE
Confidence 446667889999998763 23456666677777 665544433 1 1111111233333333321 1 112
Q ss_pred eEEE-eccCccccCC-----HHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEE
Q 017968 105 IRIW-FGIRQIMNAT-----DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 178 (363)
Q Consensus 105 v~~~-~~~~~~~~~~-----~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 178 (363)
+.++ ++........ .+.++..++.|++.|++|.+|+...... ..+.+++.+. ....+.|
T Consensus 87 ~~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~~--~~~~i~H 151 (252)
T TIGR00010 87 VAIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAEED-------------VLDILREEKP--KVGGVLH 151 (252)
T ss_pred EEEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCccHH-------------HHHHHHhcCC--CCCEEEE
Confidence 2221 1221111111 3678888999999999999999753321 3444544431 2345679
Q ss_pred eecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcC--CeEEEecCCCCCC-----CCCcHHHHHH-HHHHHhc
Q 017968 179 TVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN-----NRMSIVDEMY-LASLINK 250 (363)
Q Consensus 179 ~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G--~~~~lgTD~~~~~-----~~~~~~~~~~-~~~~~~~ 250 (363)
+...+.+.+..+.+.|+.+.++...... ....+.++++.. -++.++||.+... ...+....+. ....+..
T Consensus 152 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~ 229 (252)
T TIGR00010 152 CFTGDAELAKKLLDLGFYISISGIVTFK--NAKSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAE 229 (252)
T ss_pred ccCCCHHHHHHHHHCCCeEeeceeEecC--CcHHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 8766667777888889999988643221 223355666654 3899999985311 0001111111 1111111
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHHHHHHHhccC
Q 017968 251 GREVFANGTTDPAALPAETVLRMATINGAKSVLW 284 (363)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~ 284 (363)
..+++.+++.++++.||++++++
T Consensus 230 -----------~~g~~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 230 -----------IKGMDVEELAQITTKNAKRLFGL 252 (252)
T ss_pred -----------HhCcCHHHHHHHHHHHHHHHhCc
Confidence 12589999999999999999875
No 128
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=98.59 E-value=3.2e-07 Score=82.06 Aligned_cols=81 Identities=21% Similarity=0.193 Sum_probs=65.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCCCcCChhhhhhccccCCCccEEEEccEEEEEC
Q 017968 262 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 341 (363)
Q Consensus 262 ~~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~ 341 (363)
+..+++.++..|.-.+|||.+|++.++|.|.+|++||+.|+|.++...-|++|--.-..- -..-.+|+++|++|+.+
T Consensus 435 drE~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~v~ka---f~~A~ytlK~GeIvvkd 511 (575)
T COG1229 435 DRELTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEKVEKA---FRKAAYTLKGGEIVVKD 511 (575)
T ss_pred cccccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHHHHHH---HhheeEEecCceEEEec
Confidence 345889999999999999999999889999999999999999997666665542211111 13678999999999999
Q ss_pred Ceec
Q 017968 342 KKIL 345 (363)
Q Consensus 342 ~~~~ 345 (363)
|+++
T Consensus 512 Geiv 515 (575)
T COG1229 512 GEIV 515 (575)
T ss_pred ceEE
Confidence 9986
No 129
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.58 E-value=1.8e-05 Score=69.53 Aligned_cols=217 Identities=13% Similarity=0.053 Sum_probs=119.0
Q ss_pred HHHHHHHhCCceEeecCCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCC
Q 017968 26 LCGIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 103 (363)
Q Consensus 26 ~~~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (363)
.-+.++...||++++.++.. ..+.+.+.++.. .+.+.+.++. | .+........+++.++.+ .. .+
T Consensus 19 ~~l~~~~~~gv~~~v~~~~~~~~~~~~~~la~~~-~~i~~~~G~h------P-~~~~~~~~~~~~~l~~~~----~~-~~ 85 (251)
T cd01310 19 DVLARAREAGVIKIIVVGTDLKSSKRALELAKKY-DNVYAAVGLH------P-HDADEHVDEDLDLLELLA----AN-PK 85 (251)
T ss_pred HHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhC-CCeEEEEeeC------c-chhhcCCHHHHHHHHHHh----cC-CC
Confidence 34566788899999988743 234445555554 3333332222 1 111111122233333222 11 11
Q ss_pred CeEE-EeccCcccc-----CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEE
Q 017968 104 RIRI-WFGIRQIMN-----ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSA 177 (363)
Q Consensus 104 ~v~~-~~~~~~~~~-----~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (363)
...+ -++...... ...+.++.+++.|++.++|+.+|+..... ...+.+++.+ ....++.
T Consensus 86 ~~~IGeiGld~~~~~~~~~~q~~~~~~~~~~a~e~~~pv~iH~~~~~~-------------~~~~l~~~~~--~~~~~i~ 150 (251)
T cd01310 86 VVAIGEIGLDYYRDKSPREVQKEVFRAQLELAKELNLPVVIHSRDAHE-------------DVLEILKEYG--PPKRGVF 150 (251)
T ss_pred EEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCchH-------------HHHHHHHhcC--CCCCEEE
Confidence 1222 122221111 23467888999999999999999875422 1344455544 1235667
Q ss_pred EeecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcC--CeEEEecCCCCCCCC------CcHHHHHHHHHHHh
Q 017968 178 HTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR------MSIVDEMYLASLIN 249 (363)
Q Consensus 178 H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G--~~~~lgTD~~~~~~~------~~~~~~~~~~~~~~ 249 (363)
|+...+.+.++.+.+.|+.+.+++..... ....+.++++.+ -++.++||++-.... ..+..-......+.
T Consensus 151 H~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la 228 (251)
T cd01310 151 HCFSGSAEEAKELLDLGFYISISGIVTFK--NANELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIA 228 (251)
T ss_pred EccCCCHHHHHHHHHcCCEEEeeeeeccC--CCHHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 88766667788888899999988754221 112355666654 378999998532110 01111111111111
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHHHHHHHhcc
Q 017968 250 KGREVFANGTTDPAALPAETVLRMATINGAKSVL 283 (363)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg 283 (363)
. ..+++.+++.++++.||+++||
T Consensus 229 ~-----------~~gl~~e~~~~~~~~N~~~ll~ 251 (251)
T cd01310 229 E-----------LKGISVEEVAEVTTENAKRLFG 251 (251)
T ss_pred H-----------HHCcCHHHHHHHHHHHHHHHhC
Confidence 1 1258999999999999999985
No 130
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.55 E-value=1.1e-07 Score=85.57 Aligned_cols=94 Identities=22% Similarity=0.235 Sum_probs=70.3
Q ss_pred CCCCHHHHHHHHHHHHHHhccCCCCccccCCCCcccEEEEcCCCCCCC----CcCChhhhhhccccCCCccEEEEccEEE
Q 017968 263 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV----PVHDRITSLVYCMRTENVVSVMCNGQWV 338 (363)
Q Consensus 263 ~~~~~~~~l~~~T~~pA~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~----~~~~~~~~~~~~~~~~~v~~v~~~G~~v 338 (363)
.-++++.+++.+|..+|+.+|+.+ .|.|++|++|||+|||+...... ...-|..+......+..++.|+++|.+.
T Consensus 472 p~l~Le~av~rmT~~~Ae~~GL~d-rGlvreG~rADl~viDp~~vr~~a~y~~~~lPa~G~~~~~vn~~~vat~v~Gvvs 550 (579)
T COG3653 472 PLLSLERAVRRMTGELAEWFGLGD-RGLVREGDRADLVVIDPHLVRDVATYTEPALPAYGILRVMVNRNVVATGVGGVVS 550 (579)
T ss_pred CcccHHHHHHHHhccHHHHhCccc-ccccccccccceEEEccccccccccccCccCCCCcceEEEEeccceeeecceeEE
Confidence 348999999999999999999975 59999999999999998643221 1122333333333344577788889999
Q ss_pred EECCeecc-cCHHHHHHHHH
Q 017968 339 MKNKKILL-LMRGRLFQLQD 357 (363)
Q Consensus 339 ~~~~~~~~-~d~~~~~~~~~ 357 (363)
+++|++.+ ++...++|...
T Consensus 551 ~rdGe~tg~~~aGR~lR~g~ 570 (579)
T COG3653 551 FRDGEFTGQVKAGRYLRAGE 570 (579)
T ss_pred EecCcccCcccccchhcccc
Confidence 99999998 67776666543
No 131
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.47 E-value=5.6e-05 Score=65.88 Aligned_cols=241 Identities=14% Similarity=0.055 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC-ChHHHHHHHHHHHH
Q 017968 21 YISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR-TTDDCIQSQKELYA 95 (363)
Q Consensus 21 ~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 95 (363)
.+.+..-+.++.+.|+-|++|+.+ .++..+.+.+++.|++++.+.+.+...+ +| .|... ..+...+.+...++
T Consensus 47 ~a~~~~e~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~~-~p-~~~~~~~i~~~ae~~v~ei~ 124 (316)
T COG1735 47 VALAIAELKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAAF-HP-EYFALRPIEELAEFVVKEIE 124 (316)
T ss_pred HHHHHHHHHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEecccccccc-ch-hHHhhCCHHHHHHHHHHHHH
Confidence 344555556778899999999864 5678889999999999999888775432 23 22221 22222233333333
Q ss_pred HhcCC---CCCCeEEEeccCccccCC---HHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCC
Q 017968 96 KHHHA---ADGRIRIWFGIRQIMNAT---DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF 169 (363)
Q Consensus 96 ~~~~~---~~~~v~~~~~~~~~~~~~---~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (363)
+.... ..|.|+.+ +. .+..+ .+.++.+++..++.|.|+++|.....-.. ...+.+.+.|+
T Consensus 125 ~Gi~gT~ikAGiIk~~-~~--~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g~-----------eq~~il~~egv 190 (316)
T COG1735 125 EGIAGTGIKAGIIKEA-GG--SPAITPLEEKSLRAAARAHKETGAPISTHTPAGTMGL-----------EQLRILAEEGV 190 (316)
T ss_pred hcccCCccccceeeec-cC--cccCCHHHHHHHHHHHHHhhhcCCCeEEeccchhhhH-----------HHHHHHHHcCC
Confidence 22111 12334432 11 22233 34577777778899999999997544211 24556677775
Q ss_pred CCCCeeEEEeec-CChhH-HHHHHhCCCeEEEChhhh-cc-c--cCcccHHHHHHcCC--eEEEecCCCCCCCCCcHHHH
Q 017968 170 LQNNLLSAHTVW-VNHTE-IGLLSRAGVKVSHCPASA-MR-M--LGFAPIKEMLHADI--CVSLGTDGAPSNNRMSIVDE 241 (363)
Q Consensus 170 ~~~~~~~~H~~~-~~~~~-~~~~~~~g~~v~~~p~~~-~~-~--~~~~~~~~~l~~G~--~~~lgTD~~~~~~~~~~~~~ 241 (363)
--.++.++|+.- .++.. .+.++.+|+.+...-..- .. . ....++.++++.|. .+.+|-|.... ..+.+..
T Consensus 191 dl~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG~d~y~pd~~r~~~~~~l~~~gy~d~i~ls~d~~~~--~~~~~~~ 268 (316)
T COG1735 191 DLRKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRIGKDKYYPDEDRIAPLLELVARGYADLILLSHDDICL--SDDVFLK 268 (316)
T ss_pred ChhHeeEeccCCCCChHHHHHHHHhcCceEEecccCccccCcHHHhhhhHHHHHHhhHhhheecccchhhh--hhhHHHH
Confidence 555788999873 33333 566777899888654321 11 1 34678889999997 56666222211 0111111
Q ss_pred HHHHH--------HHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccC
Q 017968 242 MYLAS--------LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 284 (363)
Q Consensus 242 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~ 284 (363)
..+.. ....... .....+++-+.+=.|.-.||+|+|..
T Consensus 269 ~~~~~~~~~g~~~I~~~fIP-----~Lk~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 269 SMLKANGGWGYGYILNDFIP-----RLKRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred hhhhhcCCcccchhhHhhHH-----HHHHcCCCHHHHHHHHhhCHHHHhcc
Confidence 10000 0000000 00134688666666888999999875
No 132
>PRK10812 putative DNAse; Provisional
Probab=97.95 E-value=0.0014 Score=57.87 Aligned_cols=139 Identities=13% Similarity=0.071 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEE
Q 017968 120 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 199 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~ 199 (363)
+.+++.+++|+++++|+.+|+..... ...+.+++.+....+ .+.|+...+.+.++.+.+.|..+.+
T Consensus 111 ~vf~~ql~lA~e~~~Pv~iH~r~a~~-------------~~l~iL~~~~~~~~~-~v~H~fsG~~~~a~~~~~~G~~is~ 176 (265)
T PRK10812 111 ESFRHHIQIGRELNKPVIVHTRDARA-------------DTLAILREEKVTDCG-GVLHCFTEDRETAGKLLDLGFYISF 176 (265)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeCchH-------------HHHHHHHhhcCCCCC-EEEEeecCCHHHHHHHHHCCCEEEE
Confidence 46788889999999999999865332 134445544332222 4589998888889999999999998
Q ss_pred ChhhhccccCcccHHHHHHcC--CeEEEecCCCCC---CC--C-CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 017968 200 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPS---NN--R-MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 271 (363)
Q Consensus 200 ~p~~~~~~~~~~~~~~~l~~G--~~~~lgTD~~~~---~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (363)
...... .....++++++.+ -.+.+.||.+-. +. . ..+..-...+..+... .+++.+++.
T Consensus 177 ~g~~t~--~~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~ia~l-----------~g~~~eei~ 243 (265)
T PRK10812 177 SGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVL-----------KGVSVEELA 243 (265)
T ss_pred Ceeeec--CccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH-----------hCCCHHHHH
Confidence 753322 2234466677665 378999998632 10 0 1122211111122111 248999999
Q ss_pred HHHHHHHHHhccCC
Q 017968 272 RMATINGAKSVLWD 285 (363)
Q Consensus 272 ~~~T~~pA~~lg~~ 285 (363)
+..+.|+.++++++
T Consensus 244 ~~~~~N~~~lf~~~ 257 (265)
T PRK10812 244 QVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999999984
No 133
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=97.89 E-value=0.007 Score=52.87 Aligned_cols=217 Identities=13% Similarity=0.109 Sum_probs=123.4
Q ss_pred HHHHHHhCCceEeecCCc--CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCC
Q 017968 27 CGIELIHSGVTCFAEAGG--QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 104 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~--~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (363)
-+.++...||+-++..+. .+.......++... ..+...++. |.. .....+...+...++++. ...
T Consensus 22 vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~-~v~~~~G~H------P~~-~~~~~~~~~~~l~~~~~~-----~~~ 88 (256)
T COG0084 22 VIARAREAGVKKMVVVGTDLEDFKRALELAEKYP-NVYAAVGVH------PLD-ADEHSEEDLEELEQLAEH-----HPK 88 (256)
T ss_pred HHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCC-CeEEEEeeC------CCc-cccccHHHHHHHHHHHhc-----CCC
Confidence 344457789999988763 22334555555555 333333322 322 222223444444444432 122
Q ss_pred e-EEE-eccCccccCC------HHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeE
Q 017968 105 I-RIW-FGIRQIMNAT------DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLS 176 (363)
Q Consensus 105 v-~~~-~~~~~~~~~~------~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (363)
+ .++ +|........ .+.+++-+++|+++++|+.+|+-+.... ..+.+++.+. ....+
T Consensus 89 vvaIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~~d-------------~~~iL~~~~~--~~~gi 153 (256)
T COG0084 89 VVAIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAHED-------------TLEILKEEGA--PVGGV 153 (256)
T ss_pred eEEEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccHHH-------------HHHHHHhcCC--CCCEE
Confidence 2 221 2332221111 2467888899999999999999765432 4555666554 33567
Q ss_pred EEeecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHc-CC-eEEEecCCCCCC---C-C--CcHHHHHHHHHHH
Q 017968 177 AHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-DI-CVSLGTDGAPSN---N-R--MSIVDEMYLASLI 248 (363)
Q Consensus 177 ~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~-G~-~~~lgTD~~~~~---~-~--~~~~~~~~~~~~~ 248 (363)
.||...+.++.+.+.+.|..+.+.+...+.. -..+++.++. -. ++.+-||.+-.. . + ..+..-...+..+
T Consensus 154 ~HcFsGs~e~a~~~~d~G~yisisG~itfk~--a~~~~ev~~~iPldrLL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~i 231 (256)
T COG0084 154 LHCFSGSAEEARKLLDLGFYISISGIVTFKN--AEKLREVARELPLDRLLLETDAPYLAPVPYRGKRNEPAYVRHVAEKL 231 (256)
T ss_pred EEccCCCHHHHHHHHHcCeEEEECceeecCC--cHHHHHHHHhCCHhHeEeccCCCCCCCcCCCCCCCCchHHHHHHHHH
Confidence 9999999999999999999999888766543 1122222221 11 568899986321 1 0 1122211222222
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccC
Q 017968 249 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 284 (363)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~ 284 (363)
... .+++++++.+..|.|.-+++++
T Consensus 232 Ael-----------k~~~~eeva~~t~~N~~~lf~~ 256 (256)
T COG0084 232 AEL-----------KGISAEEVAEITTENAKRLFGL 256 (256)
T ss_pred HHH-----------hCCCHHHHHHHHHHHHHHHhcC
Confidence 221 2589999999999998888764
No 134
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=97.86 E-value=0.0081 Score=52.92 Aligned_cols=137 Identities=11% Similarity=0.069 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEE
Q 017968 120 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 199 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~ 199 (363)
+.+++.+++|+++++|+.+|+-+...+ ..+.+++.+.. ...+.|+...+.++.+.+.+.|..+.+
T Consensus 114 ~vf~~ql~lA~~~~~Pv~iH~r~a~~~-------------~~~il~~~~~~--~~~i~H~fsG~~~~a~~~l~~G~~iS~ 178 (258)
T PRK11449 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDLP--RTGVVHGFSGSLQQAERFVQLGYKIGV 178 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccHH-------------HHHHHHhcCCC--CCeEEEcCCCCHHHHHHHHHCCCEEEe
Confidence 568888999999999999999754322 34445544421 235789999999999999999999998
Q ss_pred ChhhhccccCcccHHHHHHc-CC-eEEEecCCCCCCC-----C-CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 017968 200 CPASAMRMLGFAPIKEMLHA-DI-CVSLGTDGAPSNN-----R-MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 271 (363)
Q Consensus 200 ~p~~~~~~~~~~~~~~~l~~-G~-~~~lgTD~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (363)
.+..... ....++++++. .. .+.+.||.+-.+. . ..+.........+... .+++.+++.
T Consensus 179 ~g~it~~--~~~~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia~l-----------~~~~~~el~ 245 (258)
T PRK11449 179 GGTITYP--RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCEL-----------RPEPADEIA 245 (258)
T ss_pred Ccccccc--CcHHHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHHHH-----------HCcCHHHHH
Confidence 7755332 12224444442 22 6899999873210 0 1122222221111111 247889988
Q ss_pred HHHHHHHHHhccC
Q 017968 272 RMATINGAKSVLW 284 (363)
Q Consensus 272 ~~~T~~pA~~lg~ 284 (363)
+..+.|..+++|+
T Consensus 246 ~~~~~N~~~lf~~ 258 (258)
T PRK11449 246 EVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHhCc
Confidence 8899998888874
No 135
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=97.79 E-value=0.0019 Score=56.89 Aligned_cols=221 Identities=12% Similarity=0.107 Sum_probs=122.1
Q ss_pred HHHHHHHHhCCceEeecCCc--CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCC-hHHHHHHHHHHHHHhcCCC
Q 017968 25 LLCGIELIHSGVTCFAEAGG--QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRT-TDDCIQSQKELYAKHHHAA 101 (363)
Q Consensus 25 ~~~~~~~l~~GvTtv~d~~~--~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 101 (363)
...+.++.+.|++.++.++. .+.....+.+...+.+.+.+.++. | |.... .....+...++ .....
T Consensus 17 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~GiH------P--~~~~~~~~~~~~~l~~l-~~~~~-- 85 (255)
T PF01026_consen 17 PEVLERAREAGVSAIIIVSTDPEDWERVLELASQYPDRVYPALGIH------P--WEAHEVNEEDLEELEEL-INLNR-- 85 (255)
T ss_dssp HHHHHHHHHTTEEEEEEEESSHHHHHHHHHHHHHTTTEEEEEE---------G--GGGGGHSHHHHHHHHHH-HHHTS--
T ss_pred HHHHHHHHHcCCCEEEEcCCCHHHhHHHHHHHhcCCCeEEEEecCC------c--chhhhhhHHHHHHHHHH-HHhcc--
Confidence 34446678899999987653 334455666667777666655544 2 11111 22333444444 22221
Q ss_pred CCCeEEE-eccCc--cccC----CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCe
Q 017968 102 DGRIRIW-FGIRQ--IMNA----TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL 174 (363)
Q Consensus 102 ~~~v~~~-~~~~~--~~~~----~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (363)
...+.++ +|... .... -.+.+++.+++|+++++|+.+|+-.... ...+.+++.+..+. .
T Consensus 86 ~~~~aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~~-------------~~l~il~~~~~~~~-~ 151 (255)
T PF01026_consen 86 PKVVAIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAHE-------------ELLEILKEYGPPNL-R 151 (255)
T ss_dssp TTEEEEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHHH-------------HHHHHHHHTTGGTS-E
T ss_pred ccceeeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcHH-------------HHHHHHHhccccce-e
Confidence 1222221 22222 1111 1346888899999999999999976332 25566666663222 5
Q ss_pred eEEEeecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHc-CC-eEEEecCCCCC-----CC-CCcHHHHHHHHH
Q 017968 175 LSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-DI-CVSLGTDGAPS-----NN-RMSIVDEMYLAS 246 (363)
Q Consensus 175 ~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~-G~-~~~lgTD~~~~-----~~-~~~~~~~~~~~~ 246 (363)
.+.|+...+.++++.+.+.|..+++.+....+. .....++++. +. .+.+-||.+-. .. ...+..-...+.
T Consensus 152 ~i~H~f~g~~~~~~~~~~~g~~~S~~~~~~~~~--~~~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~ 229 (255)
T PF01026_consen 152 VIFHCFSGSPEEAKKFLDLGCYFSFSGAITFKN--SKKVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQ 229 (255)
T ss_dssp EEETT--S-HHHHHHHHHTTEEEEEEGGGGSTT--SHHHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHH
T ss_pred EEEecCCCCHHHHHHHHhcCceEEecccccccc--cHHHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHH
Confidence 789999999999999889999999988655432 2224444432 22 78999997421 10 011111111222
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhcc
Q 017968 247 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 283 (363)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg 283 (363)
.+...+ +++++++.+....|..+++|
T Consensus 230 ~la~~~-----------~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 230 ALAEIK-----------GISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp HHHHHH-----------TSTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHc-----------CCCHHHHHHHHHHHHHHHhC
Confidence 222211 38899999999999988875
No 136
>PRK10425 DNase TatD; Provisional
Probab=97.51 E-value=0.028 Score=49.47 Aligned_cols=139 Identities=13% Similarity=-0.007 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEE
Q 017968 120 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 199 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~ 199 (363)
+.+++-+++|+++++|+.+|+-+...+ ..+.++... ......+.|+...+.+.++.+.+.|..+.+
T Consensus 108 ~vF~~ql~lA~~~~~Pv~iH~r~a~~~-------------~l~iL~~~~-~~~~~~i~H~fsG~~~~~~~~l~~G~~~si 173 (258)
T PRK10425 108 RAFVAQLAIAAELNMPVFMHCRDAHER-------------FMALLEPWL-DKLPGAVLHCFTGTREEMQACLARGLYIGI 173 (258)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCchHH-------------HHHHHHHhc-cCCCCeEEEecCCCHHHHHHHHHCCCEEEE
Confidence 567888899999999999999754321 344444421 111124579999999999999999999998
Q ss_pred ChhhhccccCcccHHHHHH-cCC-eEEEecCCCCC---CC-------CCcHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 017968 200 CPASAMRMLGFAPIKEMLH-ADI-CVSLGTDGAPS---NN-------RMSIVDEMYLASLINKGREVFANGTTDPAALPA 267 (363)
Q Consensus 200 ~p~~~~~~~~~~~~~~~l~-~G~-~~~lgTD~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (363)
.+..... .....++++++ -.. .+.+-||.+-. +. ...+..-...+..+... .+++.
T Consensus 174 ~g~i~~~-~~~~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~iA~l-----------~~~~~ 241 (258)
T PRK10425 174 TGWVCDE-RRGLELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQRIAHW-----------RGEDA 241 (258)
T ss_pred Cceeecc-cccHHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHH-----------HCcCH
Confidence 8744211 11112344433 122 67889998631 10 11232222222222221 24889
Q ss_pred HHHHHHHHHHHHHhccC
Q 017968 268 ETVLRMATINGAKSVLW 284 (363)
Q Consensus 268 ~~~l~~~T~~pA~~lg~ 284 (363)
+++.+..+.|.-+++|+
T Consensus 242 ~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 242 AWLAATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999888888764
No 137
>PRK06361 hypothetical protein; Provisional
Probab=97.46 E-value=0.027 Score=48.07 Aligned_cols=202 Identities=16% Similarity=0.126 Sum_probs=109.1
Q ss_pred CcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHH
Q 017968 43 GGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL 122 (363)
Q Consensus 43 ~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 122 (363)
+...++++++.+.+.|+..+........ + ..........+.+++.+... .+++..|.... ...++.+
T Consensus 8 g~~~~~e~v~~A~~~Gl~~i~iTDH~~~----~------~~~~~~~~~~~~~~~~~~~~--~i~v~~GiE~~-~~~~~~~ 74 (212)
T PRK06361 8 GELIPSELVRRARVLGYRAIAITDHADA----S------NLEEILEKLVRAAEELELYW--DIEVIPGVELT-HVPPKLI 74 (212)
T ss_pred CCCCHHHHHHHHHHcCCCEEEEecCCCC----c------cHHHHHHHHHHHHHHHhhcC--CCEEEEEEEEc-ccCchhh
Confidence 3456788888888988886543222110 0 11122223333233332211 25555555332 1233455
Q ss_pred HHHHHHHHHcCCe-eeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEECh
Q 017968 123 LETRDMAREFKTG-IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCP 201 (363)
Q Consensus 123 ~~~~~~a~~~g~~-v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p 201 (363)
..+.+...+++.. +.+|-...... ... .......+.+.. .+++|.-.+..+.++.+++.|+.++++.
T Consensus 75 ~~~~~~~~~~~~~~~svH~~~~~~~--~~~-------~~~~~a~~~~~~---dvlaHpd~~~~~~~~~~~~~~~~lEin~ 142 (212)
T PRK06361 75 PKLAKKARDLGAEIVVVHGETIVEP--VEE-------GTNLAAIECEDV---DILAHPGLITEEEAELAAENGVFLEITA 142 (212)
T ss_pred chHHHHHHHCCCEEEEECCCCcchh--hhh-------hhHHHHHhCCCC---cEecCcchhhHHHHHHHHHcCeEEEEEC
Confidence 6666666666554 45672211100 000 001112233332 5778887777777899999999999986
Q ss_pred hhhccccCcccHHHHHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017968 202 ASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 281 (363)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~ 281 (363)
..........-+..+.+.|++++++||..-. .++. ....+..+. ...+++.++++.+.+.||+++
T Consensus 143 ~~~~~~~~~~~l~~a~~~gi~vv~~SDaH~~---~d~~-~~~~~~~i~-----------~~~gl~~~~v~~~~~~~~~~~ 207 (212)
T PRK06361 143 RKGHSLTNGHVARIAREAGAPLVINTDTHAP---SDLI-TYEFARKVA-----------LGAGLTEKELEEALENNPKLL 207 (212)
T ss_pred CCCcccchHHHHHHHHHhCCcEEEECCCCCH---HHHH-HHHHHHHHH-----------cCCCCCHHHHHHHHHHhHHHH
Confidence 3221111122334455679999999996622 1333 232222222 244699999999999999999
Q ss_pred ccC
Q 017968 282 VLW 284 (363)
Q Consensus 282 lg~ 284 (363)
+++
T Consensus 208 ~~~ 210 (212)
T PRK06361 208 LKR 210 (212)
T ss_pred HHh
Confidence 864
No 138
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=97.39 E-value=0.056 Score=45.29 Aligned_cols=217 Identities=11% Similarity=0.133 Sum_probs=120.8
Q ss_pred HHHHHhCCceEeec----CCc-CCH-------HHH----HHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHH
Q 017968 28 GIELIHSGVTCFAE----AGG-QHV-------SEM----AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK 91 (363)
Q Consensus 28 ~~~~l~~GvTtv~d----~~~-~~~-------~~~----~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (363)
+..|..+|+-+++. ..+ .+. +.. ..-+++.|++...+.++... ++|+. .+..+.+..
T Consensus 17 lekMa~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGvHPr--~iP~e-----~~~~l~~L~ 89 (254)
T COG1099 17 LEKMALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGVHPR--AIPPE-----LEEVLEELE 89 (254)
T ss_pred HHHHHHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeEEeccCCC--CCCch-----HHHHHHHHH
Confidence 55667777777653 221 111 211 23477889998887776633 23432 333334433
Q ss_pred HHHHHhcCCCCCCeEEE-eccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCC
Q 017968 92 ELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL 170 (363)
Q Consensus 92 ~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (363)
+++ . .++.|.++ +|.+.....-.+.+++=+++|+++++|+.+|.-...-.... ....+.+...++.
T Consensus 90 ~~l---~--~e~VvAiGEiGLe~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK~e~t--------~~ildi~~~~~l~ 156 (254)
T COG1099 90 ELL---S--NEDVVAIGEIGLEEATDEEKEVFREQLELARELDVPVIVHTPRRNKKEAT--------SKILDILIESGLK 156 (254)
T ss_pred hhc---c--cCCeeEeeecccccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcchhHH--------HHHHHHHHHcCCC
Confidence 332 2 13344432 23333222234567778899999999999998654322111 1256677777777
Q ss_pred CCCeeEEEeecCChhHHHHHHhCC--CeEEEChhhhccccCcccHHHHHHcC-CeEEEecCCCCCCCCCcHHHHHHHHHH
Q 017968 171 QNNLLSAHTVWVNHTEIGLLSRAG--VKVSHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASL 247 (363)
Q Consensus 171 ~~~~~~~H~~~~~~~~~~~~~~~g--~~v~~~p~~~~~~~~~~~~~~~l~~G-~~~~lgTD~~~~~~~~~~~~~~~~~~~ 247 (363)
....++.|++ .+.++.+.+.+ +.+++.|.- +....++.-..+-| -++.+.||..... .|++.-.+.+..
T Consensus 157 ~~lvvIDH~N---~etv~~vld~e~~vGlTvqPgK---lt~~eAveIV~ey~~~r~ilnSD~~s~~--sd~lavprtal~ 228 (254)
T COG1099 157 PSLVVIDHVN---EETVDEVLDEEFYVGLTVQPGK---LTVEEAVEIVREYGAERIILNSDAGSAA--SDPLAVPRTALE 228 (254)
T ss_pred hhheehhccc---HHHHHHHHhccceEEEEecCCc---CCHHHHHHHHHHhCcceEEEeccccccc--ccchhhhHHHHH
Confidence 6667777765 34455455555 555666621 11122223333446 5899999965432 356655555544
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccC
Q 017968 248 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 284 (363)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~ 284 (363)
+.. .+++-+++-+-+-.|.-+++|+
T Consensus 229 m~~------------~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 229 MEE------------RGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred HHH------------hcCCHHHHHHHHHHHHHHHhCc
Confidence 432 2477777777777777777776
No 139
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=97.38 E-value=0.0017 Score=61.75 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=69.8
Q ss_pred eEEEeecCChhH--HHHHHhCCCeEEEChhhhccc-c--CcccHHHHHHcCCeEEEecCCCCCCCC--CcHHHHHHHHHH
Q 017968 175 LSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 247 (363)
Q Consensus 175 ~~~H~~~~~~~~--~~~~~~~g~~v~~~p~~~~~~-~--~~~~~~~~l~~G~~~~lgTD~~~~~~~--~~~~~~~~~~~~ 247 (363)
.+.|+..+..+. ..+++..++.+++||.+|..+ . ...|+..+++.|++++|+||.+..-.. ..+.++...+..
T Consensus 351 RIGHGv~l~~dp~L~~l~~~~qI~levCPlSN~~l~~~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~~ 430 (496)
T cd01319 351 GISHGINLRKVPVLQYLYYLTQIGIAMSPLSNNSLFLSYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAAQ 430 (496)
T ss_pred ccccccccCCCHHHHHHHHHcCCeEEEecCccHhhhcCcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHHH
Confidence 468999876543 445668899999999999755 2 357899999999999999999864221 246676655443
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCC
Q 017968 248 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 286 (363)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~ 286 (363)
.. +++..+ +..++.|+.+.-++++
T Consensus 431 ~~--------------~Ls~~D-l~eLarNSV~~Sf~~~ 454 (496)
T cd01319 431 VW--------------KLSTCD-MCELARNSVLQSGFEH 454 (496)
T ss_pred Hc--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 22 377777 4556778888877753
No 140
>PLN03055 AMP deaminase; Provisional
Probab=97.35 E-value=0.0019 Score=62.55 Aligned_cols=97 Identities=18% Similarity=0.124 Sum_probs=71.2
Q ss_pred eEEEeecCCh--hHHHHHHhCCCeEEEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCC--CCcHHHHHHHHHH
Q 017968 175 LSAHTVWVNH--TEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNN--RMSIVDEMYLASL 247 (363)
Q Consensus 175 ~~~H~~~~~~--~~~~~~~~~g~~v~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~--~~~~~~~~~~~~~ 247 (363)
.+.|+..+.. .-+.+++..++.+++||.+|..+ -...|+..++++|++++|+||.+.... ...+.++...+..
T Consensus 441 RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa~ 520 (602)
T PLN03055 441 NIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAAQ 520 (602)
T ss_pred eecCccccCCCHHHHHHHHHcCCeEEEccCcchhhccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHHH
Confidence 4589887653 34677889999999999999755 234689999999999999999986532 1246676665543
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCC
Q 017968 248 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 286 (363)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~ 286 (363)
.. +++..+. ..++.|+.+..++++
T Consensus 521 ~~--------------~LS~~DL-~eLarNSV~~Sf~~~ 544 (602)
T PLN03055 521 VW--------------KLSSCDL-CEIARNSVLQSGFPH 544 (602)
T ss_pred Hh--------------CCCHHHH-HHHHHHHHHHhcCCH
Confidence 22 3778884 556789988888753
No 141
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=97.31 E-value=0.0051 Score=59.81 Aligned_cols=97 Identities=18% Similarity=0.196 Sum_probs=69.4
Q ss_pred eEEEeecCChhH--HHHHHhCCCeEEEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCCC--CcHHHHHHHHHH
Q 017968 175 LSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 247 (363)
Q Consensus 175 ~~~H~~~~~~~~--~~~~~~~g~~v~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~~--~~~~~~~~~~~~ 247 (363)
.+.|+..+..+. ..++...++.+++||.+|... -...|+..++++|++++|+||.+..... ..+.++...+..
T Consensus 463 RIgHGi~l~~dp~L~yl~~~~qI~LevCPtSN~~l~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~ 542 (611)
T TIGR01429 463 GINHGILLRKVPVLQYLYYLTQIPIAMSPLSNNSLFLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQ 542 (611)
T ss_pred ccccceecCCCHHHHHHHHHcCCeEEEcCCcchhhccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHH
Confidence 368998876433 455678999999999999754 2346899999999999999999864221 246676655443
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCC
Q 017968 248 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 286 (363)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~ 286 (363)
.. +++..+ +..++.|+.+..++++
T Consensus 543 ~~--------------~Ls~~D-l~eLarNSV~~S~~~~ 566 (611)
T TIGR01429 543 VW--------------KLSTCD-MCELARNSVLQSGFEH 566 (611)
T ss_pred Hh--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 22 377877 4455678888887753
No 142
>PLN02768 AMP deaminase
Probab=96.87 E-value=0.0095 Score=59.16 Aligned_cols=95 Identities=18% Similarity=0.145 Sum_probs=68.8
Q ss_pred EEEeecCChh--HHHHHHhCCCeEEEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCCC--CcHHHHHHHHHHH
Q 017968 176 SAHTVWVNHT--EIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLI 248 (363)
Q Consensus 176 ~~H~~~~~~~--~~~~~~~~g~~v~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~~--~~~~~~~~~~~~~ 248 (363)
+.|+..+... -..++...++.+++||.+|... -...|+.+++++|++++|+||.+..... ..+.++...+...
T Consensus 675 IgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak~ 754 (835)
T PLN02768 675 IAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASV 754 (835)
T ss_pred cCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHHH
Confidence 4788886543 2456777899999999999755 2356899999999999999999875321 2467776655433
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 249 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
. +++..++. -++.|..+..+++
T Consensus 755 ~--------------~LS~~DL~-ELarNSV~aSff~ 776 (835)
T PLN02768 755 W--------------KLSSCDLC-EIARNSVYQSGFS 776 (835)
T ss_pred h--------------CcCHHHHH-HHHHHHHHHhcCC
Confidence 2 37787744 4567888887775
No 143
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=96.83 E-value=0.015 Score=50.96 Aligned_cols=150 Identities=13% Similarity=0.141 Sum_probs=90.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHH-HHHHh--CCCCCCeeEEEeecCChhHHHHHHhC
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKI--EFLQNNLLSAHTVWVNHTEIGLLSRA 193 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~ 193 (363)
.+-+.+..+++..++.|+++.+|-..+....+.+.+.. ..++ .++.+ .+-.-.+++.|+..-+. ++.+++.
T Consensus 115 ~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~----~Fi~~vl~pl~~~fP~LKIV~EHiTT~da--v~~v~~~ 188 (344)
T COG0418 115 TDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREA----AFIESVLEPLRQRFPKLKIVLEHITTKDA--VEYVKDA 188 (344)
T ss_pred CcHHHHHHHHHHHHHcCCeEEEecccCCccccchhhHH----HHHHHHHHHHHhhCCcceEEEEEeccHHH--HHHHHhc
Confidence 34567788889999999999999987766555332211 1222 33332 23344588999876544 4455554
Q ss_pred C--CeEEEChhhhccc----------------------cCcccHHHHHHcCC-eEEEecCCCCCCCC--------CcHHH
Q 017968 194 G--VKVSHCPASAMRM----------------------LGFAPIKEMLHADI-CVSLGTDGAPSNNR--------MSIVD 240 (363)
Q Consensus 194 g--~~v~~~p~~~~~~----------------------~~~~~~~~~l~~G~-~~~lgTD~~~~~~~--------~~~~~ 240 (363)
+ +..+++|++-+.. .+..++.++.-.|- .+.+|||.+|+..+ -..+.
T Consensus 189 ~~nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke~~cgcAG~fs 268 (344)
T COG0418 189 NNNLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHARSRKESACGCAGIFS 268 (344)
T ss_pred CcceeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCcccccccccccccccc
Confidence 4 6777787664211 12345566666675 89999999997531 01222
Q ss_pred HH----HHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 241 EM----YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 241 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
+. .++..++.. =.++..=..++.|+.+++|++
T Consensus 269 ap~al~~~AevFE~~-------------naL~~LeaF~S~nGp~fY~lp 304 (344)
T COG0418 269 APFALPLYAEVFEEE-------------NALDNLEAFASDNGPKFYGLP 304 (344)
T ss_pred cHhHHHHHHHHHHHh-------------cHHHHHHHHHhhcCcceeccc
Confidence 22 222222221 125555567999999999996
No 144
>PTZ00310 AMP deaminase; Provisional
Probab=96.58 E-value=0.019 Score=60.61 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=70.4
Q ss_pred eEEEeecCChh--HHHHHHhCCCeEEEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCCC--CcHHHHHHHHHH
Q 017968 175 LSAHTVWVNHT--EIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 247 (363)
Q Consensus 175 ~~~H~~~~~~~--~~~~~~~~g~~v~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~~--~~~~~~~~~~~~ 247 (363)
-+.|+..+..+ -+.+++..++.+++||.+|... -.-.|+.+++++|++++|+||.+..... -.+.++...+..
T Consensus 1134 RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~~sy~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa~ 1213 (1453)
T PTZ00310 1134 SICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALFLAFLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAAR 1213 (1453)
T ss_pred cccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhhhchhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHHH
Confidence 36899987643 3557778999999999999654 3357899999999999999999865321 136677655543
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCCC
Q 017968 248 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 286 (363)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~~ 286 (363)
. .+++..+..+ +..|+...-|.+.
T Consensus 1214 ~--------------~~LS~~Dl~e-larNSV~~SGf~~ 1237 (1453)
T PTZ00310 1214 V--------------WGLSLNDLCE-IARNSVLQSGFDA 1237 (1453)
T ss_pred H--------------hCCCHHHHHH-HHHHHHHHcCCCH
Confidence 2 2477888544 5678888888753
No 145
>PTZ00310 AMP deaminase; Provisional
Probab=96.04 E-value=0.04 Score=58.28 Aligned_cols=96 Identities=13% Similarity=0.100 Sum_probs=67.3
Q ss_pred eEEEeecCChhH-HHH-HHhCCCeEEEChhhhccc----cCcccHHHHHHcCCeEEEecCCCCCCCC--CcHHHHHHHHH
Q 017968 175 LSAHTVWVNHTE-IGL-LSRAGVKVSHCPASAMRM----LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 246 (363)
Q Consensus 175 ~~~H~~~~~~~~-~~~-~~~~g~~v~~~p~~~~~~----~~~~~~~~~l~~G~~~~lgTD~~~~~~~--~~~~~~~~~~~ 246 (363)
.+.|+..+.... +.. +...++.+++||.+|..+ -.-.|+.+++++|++++|+||.+..... -.+.++...+.
T Consensus 504 RI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaa 583 (1453)
T PTZ00310 504 VITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAM 583 (1453)
T ss_pred cccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHH
Confidence 357888776543 444 448999999999999765 2346899999999999999999876322 14667766554
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 247 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
... +++..++. .++.|+....+++
T Consensus 584 q~~--------------gLS~~DL~-eLarNSV~aSf~~ 607 (1453)
T PTZ00310 584 KLF--------------SLSPLDTT-ELARNSVLNSSFP 607 (1453)
T ss_pred HHh--------------CcCHHHHH-HHHHHHHHHhCCC
Confidence 322 37777744 4466777776664
No 146
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=95.31 E-value=1.7 Score=39.12 Aligned_cols=158 Identities=15% Similarity=0.053 Sum_probs=82.0
Q ss_pred CCeEEEeccCccc-cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCC-ChHHHHHHhCCCCCCeeEEEee
Q 017968 103 GRIRIWFGIRQIM-NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH-GTVTFLDKIEFLQNNLLSAHTV 180 (363)
Q Consensus 103 ~~v~~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~H~~ 180 (363)
+++.+-+.+.... ..+.+.+..+.+.|+++|+|+.+|.+.......... ..... .....+.+..- -++++.|+-
T Consensus 126 gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~--~~~~p~~~~~va~~fP~--l~IVl~H~G 201 (293)
T COG2159 126 GFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEK--GHSDPLYLDDVARKFPE--LKIVLGHMG 201 (293)
T ss_pred CceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCccccc--CCCCchHHHHHHHHCCC--CcEEEEecC
Confidence 4555545443322 334555789999999999999999987543211100 00000 12234444422 358999986
Q ss_pred --cCCh-hHHHHHH-hCCCeEEEChhhhccccCcccHHHHHHc-C-CeEEEecCCCCCCCCCcHHHHHHHHHHHhccccc
Q 017968 181 --WVNH-TEIGLLS-RAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV 254 (363)
Q Consensus 181 --~~~~-~~~~~~~-~~g~~v~~~p~~~~~~~~~~~~~~~l~~-G-~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (363)
..-. +.+.... ..++.+..+-..... ..+++.+.+.. | -++..|||.+.. ++...+. ...
T Consensus 202 ~~~p~~~~a~~~a~~~~nvy~d~s~~~~~~--~~~~~~~~~~~~~~dkilFGSD~P~~----~~~~~l~--~~~------ 267 (293)
T COG2159 202 EDYPWELEAIELAYAHPNVYLDTSGVRPKY--FAPPLLEFLKELGPDKILFGSDYPAI----HPEVWLA--ELD------ 267 (293)
T ss_pred CCCchhHHHHHHHHhCCCceeeeecccccc--CChHHHHHHHhcccCeEEecCCCCCc----CHHHHHH--HHH------
Confidence 2222 2232222 234444433221111 11134444433 3 389999996543 2222111 111
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHHhccCC
Q 017968 255 FANGTTDPAALPAETVLRMATINGAKSVLWD 285 (363)
Q Consensus 255 ~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~ 285 (363)
...++.+..-+++-.|++|+++++
T Consensus 268 -------~l~l~~e~k~kiL~~NA~rll~l~ 291 (293)
T COG2159 268 -------ELGLSEEVKEKILGENAARLLGLD 291 (293)
T ss_pred -------hcCCCHHHHHHHHHHhHHHHhCcC
Confidence 123667777888899999999985
No 147
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=94.81 E-value=0.022 Score=35.73 Aligned_cols=29 Identities=28% Similarity=0.430 Sum_probs=20.8
Q ss_pred CCccEEEEccEEEEECCeecccCHHHHHH
Q 017968 326 ENVVSVMCNGQWVMKNKKILLLMRGRLFQ 354 (363)
Q Consensus 326 ~~v~~v~~~G~~v~~~~~~~~~d~~~~~~ 354 (363)
..+.+|||||++++++|++.+.-..++++
T Consensus 18 ~GI~~V~VNG~~vv~~g~~t~~~~G~~lr 46 (48)
T PF07908_consen 18 EGIDYVFVNGQIVVEDGEVTGARPGRVLR 46 (48)
T ss_dssp BSEEEEEETTEEEECTTEESSS----B--
T ss_pred CCEEEEEECCEEEEECCeECCCCCCeEec
Confidence 57999999999999999988776666554
No 148
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=93.14 E-value=5.7 Score=35.00 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCC----------hhHH
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----------HTEI 187 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----------~~~~ 187 (363)
+.+.+.++++.+.++|+++.+|+...... .....+++. +.+.++.|+.... ...+
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~~~l~------------~l~~l~~~~---~l~ivldH~G~p~~~~~~~~~~~~~~l 172 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDAVDLP------------ALLPFLQKL---PVAVVIDHFGRPDVTKGVDGAEFAALL 172 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCHhhHH------------HHHHHHHHC---CCCEEEECCCCCCCCCCCCCHhHHHHH
Confidence 66778899999999999999998642211 123344444 4568899977543 1113
Q ss_pred HHHHhCCCeEEEChhhhcc-----ccCc-ccHHHHHHcCC-eEEEecCCCCC
Q 017968 188 GLLSRAGVKVSHCPASAMR-----MLGF-APIKEMLHADI-CVSLGTDGAPS 232 (363)
Q Consensus 188 ~~~~~~g~~v~~~p~~~~~-----~~~~-~~~~~~l~~G~-~~~lgTD~~~~ 232 (363)
+.++..++.+.++-..... ..+. .-+..+++.|- ++..|||.+..
T Consensus 173 ~~l~~pNV~~k~Sg~~~~~~~~~~~~~~~~~~~~~~~~g~dRlmfGSD~P~~ 224 (263)
T cd01311 173 KLIEEGNVWVKVSGPYRLSVKQEAYADVIAFARQIVAAAPDRLVWGTDWPHP 224 (263)
T ss_pred HHHhcCCEEEEecchhhcCCCCCCHHHHHHHHHHHHHhCCCcEEEeCCCCCC
Confidence 3333345555554322111 0111 12233444565 89999999754
No 149
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=93.06 E-value=1.6 Score=39.63 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHcCCeeeE-eccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEee---------cCChhHHHH
Q 017968 120 RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGL 189 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~ 189 (363)
+.-+++++.+.+.|+.+.+ |+++.. ..+.++. ...+++++|.. .+++++++.
T Consensus 154 ~~G~~vv~~mn~lGmiiDvSH~s~~~---------------~~dv~~~---s~~PviaSHsn~ral~~h~RNltD~~i~~ 215 (309)
T cd01301 154 PFGKELVREMNRLGIIIDLSHLSERT---------------FWDVLDI---SNAPVIASHSNARALCDHPRNLTDAQLKA 215 (309)
T ss_pred HHHHHHHHHHHHcCCEEEcCCCCHHH---------------HHHHHHh---cCCCEEEeccChHHhcCCCCCCCHHHHHH
Confidence 3457788888899998866 776422 1111211 13456777754 377889999
Q ss_pred HHhCCCeEEEChhhhccc----cCcccHHHHH----H-cCC-eEEEecCCC
Q 017968 190 LSRAGVKVSHCPASAMRM----LGFAPIKEML----H-ADI-CVSLGTDGA 230 (363)
Q Consensus 190 ~~~~g~~v~~~p~~~~~~----~~~~~~~~~l----~-~G~-~~~lgTD~~ 230 (363)
++++|..|.++....+-. .....+.+.+ + .|+ .+++|||..
T Consensus 216 ia~~GGvigi~~~~~fl~~~~~~~~~~~~~hi~~i~~l~G~dhVgiGsDfd 266 (309)
T cd01301 216 IAETGGVIGVNFYPAFLSPGADATLDDVVRHIDYIVDLIGIDHVGLGSDFD 266 (309)
T ss_pred HHHcCCEEEEeeeHHHhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECcccC
Confidence 999997777665433211 1222222222 2 466 699999964
No 150
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=93.00 E-value=5.6 Score=34.50 Aligned_cols=108 Identities=12% Similarity=0.079 Sum_probs=65.1
Q ss_pred eeEEEeec------CChhHHHHHHhCCCeEEEChhhhcccc------Cc----ccHHHHHHcCCeEEEecCCCCCCCCCc
Q 017968 174 LLSAHTVW------VNHTEIGLLSRAGVKVSHCPASAMRML------GF----APIKEMLHADICVSLGTDGAPSNNRMS 237 (363)
Q Consensus 174 ~~~~H~~~------~~~~~~~~~~~~g~~v~~~p~~~~~~~------~~----~~~~~~l~~G~~~~lgTD~~~~~~~~~ 237 (363)
.+++|... .....++.++++|+.++++-....+.. .. ..+....+.|+++++|||.+....-.+
T Consensus 105 dIi~hp~~~~~~~~~~~~~~~~a~~~gv~lEIn~s~~~~~~~~~r~~~~~~~~~~~~~~~~~g~piiisSdAh~~~~l~~ 184 (237)
T PRK00912 105 DILSHPYTKRKDSGINHVLAKEAARNNVAIEFNLRDILKSRGGRRARTLSNFRDNLALARKYDFPLVLTSGAMSCYDLRS 184 (237)
T ss_pred cEEeCccccCCCCCcCHHHHHHHHHCCeEEEEEchHhhhhcccHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcccccCC
Confidence 35566543 233456888899999998775432211 01 223344457999999999654322122
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHhccCC-CCccccCCCCc
Q 017968 238 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD-NDIGSLEAGKK 296 (363)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~lg~~-~~~G~i~~G~~ 296 (363)
+.+...++ . ..+++.++++..++.+|.+++... .+.+.|..|..
T Consensus 185 ~~~~~~l~---~------------~~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 229 (237)
T PRK00912 185 PREMIALA---E------------LFGMEEDEALKALSYYPESIIKKNRNRKNYVIEGVE 229 (237)
T ss_pred HHHHHHHH---H------------HcCCCHHHHHHHHHHhHHHHHHhhccCCCcccccEE
Confidence 33332222 1 235899999999999999998542 34456666643
No 151
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=91.88 E-value=7.9 Score=33.62 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=32.2
Q ss_pred HHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCCeEEEecCCCCC
Q 017968 186 EIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPS 232 (363)
Q Consensus 186 ~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgTD~~~~ 232 (363)
.++.+++.|..+.++....-......-+..+.+.|+.+++|||.+..
T Consensus 152 ~~~~~~~~g~aleins~~~~~~~~~~~~~~~~e~G~~~~i~tDaH~~ 198 (237)
T COG1387 152 LIELAEKNGKALEINSRPGRLDPNSEILRLARELGVKLAIGTDAHRP 198 (237)
T ss_pred HHHHHHHhCcEEeecCCcCccCchHHHHHHHHHhCCeEEeecCcCCh
Confidence 37788889999988765221112334456667789999999996543
No 152
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=91.76 E-value=8.3 Score=33.64 Aligned_cols=136 Identities=11% Similarity=0.072 Sum_probs=82.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCeE
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 197 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v 197 (363)
+.+.++.++++|++.+++++.|......+.- . ...+.+++.|+. +..+.-|.+..... .+...|+.-
T Consensus 143 ~n~vl~~a~elA~dvdc~vqLHtes~~~~~~-~--------~i~~~ak~~G~~-~~~VVkHha~p~v~---~~~~~Gi~p 209 (285)
T COG1831 143 SNEVLEYAMELAKDVDCAVQLHTESLDEETY-E--------EIAEMAKEAGIK-PYRVVKHHAPPLVL---KCEEVGIFP 209 (285)
T ss_pred HHHHHHHHHHHhhcCCCcEEEecCCCChHHH-H--------HHHHHHHHhCCC-cceeEeecCCccch---hhhhcCcCC
Confidence 4567889999999999999999965432111 1 245567777773 33445564433322 222244433
Q ss_pred EEChhhhccccCcccHHHHHHcCCeEEEecCCCCCC----CCCcHHHHH-HHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 017968 198 SHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSN----NRMSIVDEM-YLASLINKGREVFANGTTDPAALPAETVLR 272 (363)
Q Consensus 198 ~~~p~~~~~~~~~~~~~~~l~~G~~~~lgTD~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 272 (363)
++ . .+...+.++++.|-...+-||.---+ .-+.++.-. +..-++++ ..++.+.+.+
T Consensus 210 SV----~---asr~~v~~a~~~g~~FmmETDyIDDp~RpgavL~PktVPrr~~~i~~~------------g~~~ee~vy~ 270 (285)
T COG1831 210 SV----P---ASRKNVEDAAELGPRFMMETDYIDDPRRPGAVLGPKTVPRRTREILEK------------GDLTEEDVYR 270 (285)
T ss_pred cc----c---ccHHHHHHHHhcCCceEeecccccCcccCCCcCCccchhHHHHHHHHh------------cCCcHHHHHH
Confidence 32 1 12235788999999999999985211 112222222 22222332 2367888889
Q ss_pred HHHHHHHHhccCC
Q 017968 273 MATINGAKSVLWD 285 (363)
Q Consensus 273 ~~T~~pA~~lg~~ 285 (363)
..-.||.+++|++
T Consensus 271 i~~E~pe~VYg~~ 283 (285)
T COG1831 271 IHVENPERVYGIE 283 (285)
T ss_pred HHHhCHHHHhCcc
Confidence 9999999999974
No 153
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=91.69 E-value=1.1 Score=39.48 Aligned_cols=146 Identities=13% Similarity=0.031 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecC--ChhH-HHHHHhC-CC
Q 017968 120 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTE-IGLLSRA-GV 195 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~--~~~~-~~~~~~~-g~ 195 (363)
.....+++.|.++|+++.+|++.............. ......+.+.. +-++++.|+-.. ...+ +.++.+. ++
T Consensus 117 ~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~~~~~~--~~~~~~~~~~P--~l~ii~~H~G~~~~~~~~~~~l~~~~~nv 192 (273)
T PF04909_consen 117 RLDDPIFEAAEELGLPVLIHTGMTGFPDAPSDPADP--EELEELLERFP--DLRIILAHLGGPFPWWEEALRLLDRFPNV 192 (273)
T ss_dssp HCHHHHHHHHHHHT-EEEEEESHTHHHHHHHHHHHH--HHHTTHHHHST--TSEEEESGGGTTHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHhhccceeeeccccchhhhhHHHHHH--HHHHHHHHHhc--CCeEEEecCcccchhHHHHHHHHHhCCcc
Confidence 333589999999999999997511110000000000 00111223322 235788898776 2233 4444442 45
Q ss_pred eEEEChhhh----ccc-cCcccHHHHHHc-CC-eEEEecCCCCCCCCCcHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 017968 196 KVSHCPASA----MRM-LGFAPIKEMLHA-DI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAE 268 (363)
Q Consensus 196 ~v~~~p~~~----~~~-~~~~~~~~~l~~-G~-~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (363)
.+.++-... ... .....+..+++. |. ++..|||.+... ............... .++.+
T Consensus 193 y~d~s~~~~~~~~~~~~~~~~~l~~~~~~~g~drilfGSD~P~~~----~~~~~~~~~~~~~~~-----------~l~~~ 257 (273)
T PF04909_consen 193 YVDLSGIPPFWYFWPPSFDRPFLRRAVDEFGPDRILFGSDYPHPD----GASPYEYIWEAYFLD-----------DLSEE 257 (273)
T ss_dssp EEECHSHHSSEEEETTHHCHHHHHHHHHHHTGGGEEEE--TTSST----HHHHHHHHHHHHHHH-----------HSSHH
T ss_pred cccccccccccccCcccccHHHHHHHHHHhCCceEEecCCCCCCC----ccccHHHHHHhhhcc-----------CCCHH
Confidence 544322110 011 223445555543 44 899999987542 222222211111100 05778
Q ss_pred HHHHHHHHHHHHhccC
Q 017968 269 TVLRMATINGAKSVLW 284 (363)
Q Consensus 269 ~~l~~~T~~pA~~lg~ 284 (363)
+.-+.+..|++|++++
T Consensus 258 ~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 258 EREKILYDNARRLYGL 273 (273)
T ss_dssp HHHHHHTHHHHHHHTC
T ss_pred HHHHHHhHhHHHHcCc
Confidence 8888999999999875
No 154
>PRK07945 hypothetical protein; Provisional
Probab=91.49 E-value=11 Score=34.58 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=31.7
Q ss_pred HHHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCC
Q 017968 186 EIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 231 (363)
Q Consensus 186 ~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~ 231 (363)
-++.+++.|+.++++.... +. ....-+..+.+.|+++++|||.+.
T Consensus 250 i~~a~~e~g~~lEINt~~~-r~~P~~~il~~a~e~G~~vtigSDAH~ 295 (335)
T PRK07945 250 VFAACREHGTAVEINSRPE-RRDPPTRLLRLALDAGCLFSIDTDAHA 295 (335)
T ss_pred HHHHHHHhCCEEEEeCCCC-CCCChHHHHHHHHHcCCeEEecCCCCC
Confidence 3678889999999986432 22 222345666778999999999553
No 155
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=90.07 E-value=7.4 Score=36.10 Aligned_cols=106 Identities=11% Similarity=-0.007 Sum_probs=59.4
Q ss_pred HHHHHHHhCCceEeecCC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCC
Q 017968 26 LCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 101 (363)
Q Consensus 26 ~~~~~~l~~GvTtv~d~~----~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (363)
..+..+..+|++.++.+- ..+++..++++++.|.......+ ++. +| .+.++...++.+++...+
T Consensus 102 ~Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~-YT~----sP-------vHt~e~yv~~akel~~~g 169 (472)
T COG5016 102 KFVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTIS-YTT----SP-------VHTLEYYVELAKELLEMG 169 (472)
T ss_pred HHHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEE-ecc----CC-------cccHHHHHHHHHHHHHcC
Confidence 444555999999987653 25677888999999985443333 332 22 222334444444443332
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCChhh
Q 017968 102 DGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPYE 146 (363)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~ 146 (363)
-+.+. +. ......++....++++.+++ .++++++|+..+...
T Consensus 170 ~DSIc--iK-DmaGlltP~~ayelVk~iK~~~~~pv~lHtH~TsG~ 212 (472)
T COG5016 170 VDSIC--IK-DMAGLLTPYEAYELVKAIKKELPVPVELHTHATSGM 212 (472)
T ss_pred CCEEE--ee-cccccCChHHHHHHHHHHHHhcCCeeEEecccccch
Confidence 22221 11 11123345555666666654 689998888776543
No 156
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=89.15 E-value=11 Score=33.69 Aligned_cols=157 Identities=11% Similarity=0.130 Sum_probs=85.0
Q ss_pred HHHhCCceEeecCCc--CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC-ChHHHHHHHHHHHHHhcCCCCCCeE
Q 017968 30 ELIHSGVTCFAEAGG--QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR-TTDDCIQSQKELYAKHHHAADGRIR 106 (363)
Q Consensus 30 ~~l~~GvTtv~d~~~--~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~ 106 (363)
.+...||.-++.+++ ...+.+.+.++......+...++.-. ....+... ..+...++...+++. .. ....+.
T Consensus 40 ~a~~~~v~~~~v~gt~~~d~~~~~~l~~~y~~~v~~t~G~HP~---~~~~~~~~~~~~~~~~~L~~~~~~-~~-~~k~vA 114 (296)
T KOG3020|consen 40 RAVQAGVSKLIVTGTSLKDSKEALELAEKYPGSVYPTFGVHPH---FSQEFSDQSRKEKFLDTLLSIIEN-GF-LPKVVA 114 (296)
T ss_pred HHHhccceEEEEeCCCcchHHHHHHHHhhCCCceeeccCcCCC---cccchhhccchhhHHHHHHHHHhh-cc-cCCeEE
Confidence 336668988887764 33456666666663333332222110 01111111 122334445555544 11 112222
Q ss_pred EE-ecc--CccccCCH----HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEe
Q 017968 107 IW-FGI--RQIMNATD----RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 179 (363)
Q Consensus 107 ~~-~~~--~~~~~~~~----~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 179 (363)
++ +|. ++...++. ..+++=+++|.+..+|+.+|+-.... ...+.+.+...--..-+..|+
T Consensus 115 iGEcGLD~~r~~~~~~~~Qk~vFekQl~LA~~~~~Pl~iH~r~a~~-------------d~~eIl~~~~~~~~~~vvvHs 181 (296)
T KOG3020|consen 115 IGECGLDYDRLQFSDKEEQKTVFEKQLDLAKRLKLPLFIHCRSAHE-------------DLLEILKRFLPECHKKVVVHS 181 (296)
T ss_pred eeccccccchhccCChHHHHHHHHHHHHHHHHccCCeeeechhhhH-------------HHHHHHHHhccccCCceEEEe
Confidence 21 111 11112222 35777889999999999999975322 144455554433222478999
Q ss_pred ecCChhHHHHHHhCCCeEEEChhhh
Q 017968 180 VWVNHTEIGLLSRAGVKVSHCPASA 204 (363)
Q Consensus 180 ~~~~~~~~~~~~~~g~~v~~~p~~~ 204 (363)
.+.+.++++.+.+.+..+.+++.+.
T Consensus 182 FtGs~e~~~~~lk~~~yig~~g~~~ 206 (296)
T KOG3020|consen 182 FTGSAEEAQKLLKLGLYIGFTGCSL 206 (296)
T ss_pred ccCCHHHHHHHHHccEEecccceee
Confidence 9999999999999997777666443
No 157
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=88.23 E-value=10 Score=34.21 Aligned_cols=136 Identities=15% Similarity=0.167 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHcCCeeeE-eccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEee---------cCChhHHHHH
Q 017968 121 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLL 190 (363)
Q Consensus 121 ~l~~~~~~a~~~g~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~~ 190 (363)
.-+++++.+.++|+.+.+ |+++... .+.+ .+-....+++|++ .+++++++.+
T Consensus 150 ~Gk~lV~~~N~LgIiiDlSH~s~kt~---------------~Dvl---~~s~~PviaSHSN~~al~~h~RNl~D~qlkaI 211 (313)
T COG2355 150 FGKELVREMNELGIIIDLSHLSDKTF---------------WDVL---DLSKAPVVASHSNARALVDHPRNLSDEQLKAI 211 (313)
T ss_pred HHHHHHHHHHhcCCEEEecccCCccH---------------HHHH---hccCCceEEecCCchhccCCCCCCCHHHHHHH
Confidence 457888999999999866 7765331 1111 1223345666654 4778899999
Q ss_pred HhCCCeEEEC--hhhhccc-cCcccHHH-------HHH-cCC-eEEEecCCCCCCCCCc-HHHHHHHHHHHhcccccccC
Q 017968 191 SRAGVKVSHC--PASAMRM-LGFAPIKE-------MLH-ADI-CVSLGTDGAPSNNRMS-IVDEMYLASLINKGREVFAN 257 (363)
Q Consensus 191 ~~~g~~v~~~--p~~~~~~-~~~~~~~~-------~l~-~G~-~~~lgTD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 257 (363)
+++|..|-++ |..--.. .....+.. +.+ -|+ -+++|||....+..++ +-+.-.+..++....
T Consensus 212 ~~~gGvIgv~~~~~fl~~~~~~~atldd~v~hI~h~v~~~G~dhVglGsDf~g~~~~p~gled~~~l~~l~~~L~----- 286 (313)
T COG2355 212 AETGGVIGVNFIPAFLRPGGAARATLDDLVRHIDHFVELVGIDHVGLGSDFDGGTGPPDGLEDVGKLPNLTAALI----- 286 (313)
T ss_pred HhcCCEEEEEeehhhccCCCCCCCCHHHHHHHHHHHHHhcCcceeEecccccCCCCCchhhcChhHHHHHHHHHH-----
Confidence 9998655544 3222110 01222222 233 355 6999999753321111 111112222222221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcc
Q 017968 258 GTTDPAALPAETVLRMATINGAKSVL 283 (363)
Q Consensus 258 ~~~~~~~~~~~~~l~~~T~~pA~~lg 283 (363)
..+++-+++-+.+-.|=-|++.
T Consensus 287 ----~~G~~e~~i~~i~~~N~lRV~~ 308 (313)
T COG2355 287 ----ERGYSEEEIEKIAGENWLRVLK 308 (313)
T ss_pred ----HcCCCHHHHHHHHHHhHHHHHH
Confidence 2346777777777777666653
No 158
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=87.47 E-value=5.8 Score=39.35 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=60.3
Q ss_pred HHHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCC
Q 017968 26 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 101 (363)
Q Consensus 26 ~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (363)
..++++.++|+..++.+.. .+++..++++++.|.......|.+. + | ..+.+...+ +.+++...+
T Consensus 100 ~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~-s---p----~~t~e~~~~----~ak~l~~~G 167 (596)
T PRK14042 100 AFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYTT-S---P----VHTLDNFLE----LGKKLAEMG 167 (596)
T ss_pred HHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEecC-C---C----CCCHHHHHH----HHHHHHHcC
Confidence 3556669999999875532 4456778889999986655444432 1 1 113333333 333333322
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCCh
Q 017968 102 DGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 144 (363)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~ 144 (363)
...+. +. ......++....++++..++ .++++++|+.++.
T Consensus 168 ad~I~--Ik-DtaG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~ 208 (596)
T PRK14042 168 CDSIA--IK-DMAGLLTPTVTVELYAGLKQATGLPVHLHSHSTS 208 (596)
T ss_pred CCEEE--eC-CcccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCC
Confidence 22222 22 22234567777777776664 5799999988764
No 159
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=86.75 E-value=2.3 Score=38.78 Aligned_cols=133 Identities=14% Similarity=0.111 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHcCCeeeE-eccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEee---------cCChhHHHH
Q 017968 120 RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGL 189 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~---------~~~~~~~~~ 189 (363)
+.=+++++.+.+.|+.+.+ |+++.. ..+.++. ...+++++|.. .+++++++.
T Consensus 160 ~~G~~vV~~mn~lGm~vDvSH~s~~t---------------~~Dv~~~---s~~PviaSHSn~ral~~h~RNltDe~ira 221 (320)
T PF01244_consen 160 PFGREVVREMNRLGMLVDVSHLSEKT---------------FWDVLEI---SKKPVIASHSNARALCPHPRNLTDEQIRA 221 (320)
T ss_dssp HHHHHHHHHHHHHT-EEE-TTB-HHH---------------HHHHHHH----SSEEEECCEEBTTTS--TTSB-HHHHHH
T ss_pred hHHHHHHHHHHHcCCeeeeccCCHHH---------------HHHHHhh---cCCCEEEeccChHhhCCCCCCCCHHHHHH
Confidence 4457888888999998866 775322 1112211 22345666655 467788999
Q ss_pred HHhCCCeEEEChhhhccc-c--CcccHHHHH-------H-cCC-eEEEecCCCCCC---CCC-cHHHHHHHHHHHhcccc
Q 017968 190 LSRAGVKVSHCPASAMRM-L--GFAPIKEML-------H-ADI-CVSLGTDGAPSN---NRM-SIVDEMYLASLINKGRE 253 (363)
Q Consensus 190 ~~~~g~~v~~~p~~~~~~-~--~~~~~~~~l-------~-~G~-~~~lgTD~~~~~---~~~-~~~~~~~~~~~~~~~~~ 253 (363)
++++|..|-++....+-. . ....+..++ + .|+ .+++|||.-... .+. +...-......+.+
T Consensus 222 ia~~GGviGi~~~~~fl~~~~~~~~~~~~~~~Hi~y~~~l~G~dhVgiGsDfdg~~~~~~gl~~~~~~~~l~~~L~~--- 298 (320)
T PF01244_consen 222 IAERGGVIGINFYPAFLGDDWDPRASLDDLVDHIDYIVDLVGIDHVGIGSDFDGIDGPPEGLEDPSDLPNLTEELLK--- 298 (320)
T ss_dssp HHHTT-EEEEESSHHHHSTTHSSG-BHHHHHHHHHHHHHHH-GGGEEEE--BTTTSSHBBTBSSGGGHHHHHHHHHH---
T ss_pred HHHCCcEEEEEcchhhhcccccccccHHHHHHHHHHHHHhcCCCeEEECcccCCCCCCCCccCCHHHHHHHHHHHHH---
Confidence 999997777665443211 1 223333322 2 355 699999963211 111 11111122221211
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHHhc
Q 017968 254 VFANGTTDPAALPAETVLRMATINGAKSV 282 (363)
Q Consensus 254 ~~~~~~~~~~~~~~~~~l~~~T~~pA~~l 282 (363)
.+++-+++-+.+-.|--|++
T Consensus 299 ---------rG~s~~~i~kI~g~N~lRv~ 318 (320)
T PF01244_consen 299 ---------RGYSEEDIEKILGGNFLRVL 318 (320)
T ss_dssp ---------TTS-HHHHHHHHTHHHHHHH
T ss_pred ---------CCCCHHHHHHHHhHhHHHHh
Confidence 24778887777777766654
No 160
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=86.53 E-value=12 Score=32.87 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=30.3
Q ss_pred HHHHHhCCCeEEEChhhhccc--cCc----ccHHHHHHcCCeEEEecCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRM--LGF----APIKEMLHADICVSLGTDGA 230 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~--~~~----~~~~~~l~~G~~~~lgTD~~ 230 (363)
++.+++.|..++++... ++. ... .-+..+.+.|+++++|||.+
T Consensus 191 l~~~~~~g~~lEiNt~g-~r~~~~~~yP~~~il~~~~~~g~~itlgSDAH 239 (253)
T TIGR01856 191 LKLVASQGKALEFNTSG-LRKPLEEAYPSKELLNLAKELGIPLVLGSDAH 239 (253)
T ss_pred HHHHHHcCCEEEEEcHh-hcCCCCCCCCCHHHHHHHHHcCCCEEecCCCC
Confidence 56788899999998753 232 112 23455667899999999955
No 161
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=84.18 E-value=12 Score=36.04 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=58.9
Q ss_pred HHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCC
Q 017968 27 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 102 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
.++.+.++|+..++-+.. .+.+..++.+++.|.......+... +| ..+.+.. .+..++....+.
T Consensus 110 fv~~a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~~~~~~i~yt~-----sp---~~t~~y~----~~~a~~l~~~Ga 177 (468)
T PRK12581 110 FISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTT-----SP---VHTLNYY----LSLVKELVEMGA 177 (468)
T ss_pred HHHHHHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCCEEEEEEEEEe-----CC---cCcHHHH----HHHHHHHHHcCC
Confidence 456679999999875532 3456777889999987654444332 11 1123333 333333332222
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCChh
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPY 145 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~ 145 (363)
+.+. +. ......++....++++..++ .++++++|+.++..
T Consensus 178 d~I~--Ik-DtaG~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~G 218 (468)
T PRK12581 178 DSIC--IK-DMAGILTPKAAKELVSGIKAMTNLPLIVHTHATSG 218 (468)
T ss_pred CEEE--EC-CCCCCcCHHHHHHHHHHHHhccCCeEEEEeCCCCc
Confidence 3332 22 22234567777777777665 46888888877653
No 162
>PRK08609 hypothetical protein; Provisional
Probab=83.63 E-value=50 Score=32.89 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=32.5
Q ss_pred HHHHHhCCCeEEEChhhhccc-cCcccHHHHHHcCCeEEEecCCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 231 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~l~~G~~~~lgTD~~~ 231 (363)
++.+++.|+.+.++..+. +. .....+..+.+.|+++++|||.+.
T Consensus 485 ~~~a~~~G~~lEINa~~~-r~~~~~~~~~~~~e~Gv~i~igSDAH~ 529 (570)
T PRK08609 485 IELAKETNTALELNANPN-RLDLSAEHLKKAQEAGVKLAINTDAHH 529 (570)
T ss_pred HHHHHHhCCEEEEcCCcc-ccCccHHHHHHHHHcCCEEEEECCCCC
Confidence 456678999999986543 33 334556788889999999999653
No 163
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=83.41 E-value=15 Score=35.72 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=57.9
Q ss_pred HHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCC
Q 017968 27 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 102 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
.+..++.+|+..++-+.+ .+++..++++++.|.......+... + + ..+.+.. .++.+++...+.
T Consensus 102 fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~~i~yt~-s----p---~~t~e~~----~~~a~~l~~~Ga 169 (499)
T PRK12330 102 FVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQGTICYTV-S----P---IHTVEGF----VEQAKRLLDMGA 169 (499)
T ss_pred HHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEEEEEEec-C----C---CCCHHHH----HHHHHHHHHcCC
Confidence 445558899998765432 3456777888888876533333221 1 1 1133333 333333333222
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHc---CCeeeEeccCChh
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMAREF---KTGIHMHVAEIPY 145 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~~~~ 145 (363)
..+. +. ......++....++++..++. ++++++|+.++..
T Consensus 170 d~I~--Ik-DtaGll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~G 212 (499)
T PRK12330 170 DSIC--IK-DMAALLKPQPAYDIVKGIKEACGEDTRINLHCHSTTG 212 (499)
T ss_pred CEEE--eC-CCccCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCC
Confidence 3332 22 222345677778888777764 6899999887653
No 164
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=82.22 E-value=10 Score=28.55 Aligned_cols=47 Identities=23% Similarity=0.237 Sum_probs=23.5
Q ss_pred CcCCCCchhHHHHHHHHHHHHHhCCceEeecCCcC-------CHHHHHHHHHHcCCeEEEec
Q 017968 11 YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 11 ~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-------~~~~~~~~~~~~gir~~~~~ 65 (363)
.....+++| +.++.+.|+.||++..+. ......+++++.|+..+..+
T Consensus 11 vs~Q~~~~d--------~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iP 64 (110)
T PF04273_consen 11 VSGQPSPED--------LAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIP 64 (110)
T ss_dssp EECS--HHH--------HHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE--
T ss_pred ECCCCCHHH--------HHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEee
Confidence 345667777 345567789998876432 12345677778887755533
No 165
>PRK07328 histidinol-phosphatase; Provisional
Probab=77.97 E-value=49 Score=29.23 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=30.6
Q ss_pred HHHHHhCCCeEEEChhhhccc--cC----cccHHHHHHcCCeEEEecCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRM--LG----FAPIKEMLHADICVSLGTDGA 230 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~--~~----~~~~~~~l~~G~~~~lgTD~~ 230 (363)
++.+++.|+.++++... ++. .. ..-+..+.+.|+++++|||.+
T Consensus 183 l~~~~~~g~~lEiNt~~-~r~~~~~~yp~~~il~~~~~~g~~itigSDAH 231 (269)
T PRK07328 183 LDVIAAAGLALEVNTAG-LRKPVGEIYPSPALLRACRERGIPVVLGSDAH 231 (269)
T ss_pred HHHHHHcCCEEEEEchh-hcCCCCCCCCCHHHHHHHHHcCCCEEEeCCCC
Confidence 67788999999998753 222 11 123456677899999999965
No 166
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=77.83 E-value=44 Score=28.66 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=61.2
Q ss_pred hHHHHHHhCCCeEEEChhhhccccCcc------cHHH----HHHcCCeEEEecCCCCCCCCCcHHHHHHHHHHHhccccc
Q 017968 185 TEIGLLSRAGVKVSHCPASAMRMLGFA------PIKE----MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV 254 (363)
Q Consensus 185 ~~~~~~~~~g~~v~~~p~~~~~~~~~~------~~~~----~l~~G~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (363)
..++.++++++.+.+.-....+..+.. .++. ..+-|+++.++||.... .+++.+.....+...
T Consensus 117 ~~a~laa~~~valeisl~~ll~~~g~~Ra~~l~~lr~~lrl~rk~~v~ivvtS~A~s~---~elrsP~dv~sl~~~---- 189 (229)
T COG1603 117 VLARLAAEKGVALEISLRPLLRSSGYRRARLLSFLRSLLRLARKYDVPIVVTSDAESP---LELRSPRDVISLAKV---- 189 (229)
T ss_pred HHHHHHHhcCceEEEehHHhhccchhHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCh---hhhcChhhHHHHHHH----
Confidence 457888899999998766554432222 1222 22349999999997643 345555555544432
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHHhcc-CC-CCccccCCC
Q 017968 255 FANGTTDPAALPAETVLRMATINGAKSVL-WD-NDIGSLEAG 294 (363)
Q Consensus 255 ~~~~~~~~~~~~~~~~l~~~T~~pA~~lg-~~-~~~G~i~~G 294 (363)
.+++..+|-++++..|.++|. .. .+.|.|.+|
T Consensus 190 --------lG~e~~ea~~~~~~~p~~iL~~~~~~~~~~i~~g 223 (229)
T COG1603 190 --------LGLEDDEAKKSLSEYPRLILRNRNRIRDGFIVPG 223 (229)
T ss_pred --------hCCCHHHHHHHHHHhHHHHHHHhhhcCCceEEec
Confidence 258899999999999999986 21 123555554
No 167
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=77.80 E-value=22 Score=38.38 Aligned_cols=111 Identities=12% Similarity=-0.023 Sum_probs=60.6
Q ss_pred HHHHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCC
Q 017968 25 LLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 100 (363)
Q Consensus 25 ~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (363)
+..++++.++|+..++.+-. .++...++++++.|...-...+.. .. -.++.....+.+ ...++.+++...
T Consensus 628 ~~f~~~~~~~GidifrifD~lN~~~n~~~~~~~~~~~g~~~~~~i~yt-~~-~~d~~~~~~~l~----y~~~~ak~l~~~ 701 (1143)
T TIGR01235 628 KYFVKQAAQGGIDIFRVFDSLNWVENMRVGMDAVAEAGKVVEAAICYT-GD-ILDPARPKYDLK----YYTNLAVELEKA 701 (1143)
T ss_pred HHHHHHHHHcCCCEEEECccCcCHHHHHHHHHHHHHcCCEEEEEEEEe-cc-CCCcCCCCCCHH----HHHHHHHHHHHc
Confidence 44556679999999876543 456777888899997654433322 11 011111112233 333333333332
Q ss_pred CCCCeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCCh
Q 017968 101 ADGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 144 (363)
Q Consensus 101 ~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~ 144 (363)
+...+. +. ......++....++++..++ .++++++|+.++.
T Consensus 702 Gad~I~--ik-Dt~Gll~P~~~~~Lv~~lk~~~~~pi~~H~Hdt~ 743 (1143)
T TIGR01235 702 GAHILG--IK-DMAGLLKPAAAKLLIKALREKTDLPIHFHTHDTS 743 (1143)
T ss_pred CCCEEE--EC-CCcCCcCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 222222 22 22234566777777766654 5899999987754
No 168
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=76.84 E-value=30 Score=32.16 Aligned_cols=118 Identities=11% Similarity=0.137 Sum_probs=71.6
Q ss_pred cccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhh------cCCCCChHHHHHHhCCCCCCeeEEEeecCChhHH
Q 017968 114 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT------RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 187 (363)
Q Consensus 114 ~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 187 (363)
....+.+.++.+.+++++.|+++.+-..+... .+...+. ......-...++..+-.+..+++.-+.+.+.+|+
T Consensus 163 f~g~~~e~l~~L~~~~~~~Gl~~~t~v~d~~~-~~~l~~~vd~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~ 241 (360)
T PRK12595 163 FQGLGVEGLKILKQVADEYGLAVISEIVNPAD-VEVALDYVDVIQIGARNMQNFELLKAAGRVNKPVLLKRGLSATIEEF 241 (360)
T ss_pred ccCCCHHHHHHHHHHHHHcCCCEEEeeCCHHH-HHHHHHhCCeEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHH
Confidence 34456788999999999999999886654332 2222221 1111123457777777777888888877777764
Q ss_pred ----HHHHhCCC-eEEECh---hh-h-c-cc-cCcccHHHHHH-cCCeEEEecCCCCC
Q 017968 188 ----GLLSRAGV-KVSHCP---AS-A-M-RM-LGFAPIKEMLH-ADICVSLGTDGAPS 232 (363)
Q Consensus 188 ----~~~~~~g~-~v~~~p---~~-~-~-~~-~~~~~~~~~l~-~G~~~~lgTD~~~~ 232 (363)
+.+...|. .+..|. ++ . . +. .+...+..+.+ -|+++++.+||..+
T Consensus 242 ~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 242 IYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred HHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 44555553 344443 11 0 1 11 34444555555 68899998898754
No 169
>PRK08392 hypothetical protein; Provisional
Probab=75.81 E-value=49 Score=28.11 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=30.3
Q ss_pred HHHHHhCCCeEEEChhhhccccCcccHHHHHHcCCeEEEecCCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP 231 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgTD~~~ 231 (363)
++.++++|..++++... +.....-+..+.+.|+++++|||.+.
T Consensus 143 ~~~~~~~g~~lEiNt~~--~~p~~~~l~~~~~~G~~~~igSDAH~ 185 (215)
T PRK08392 143 LDLAEAYGKAFEISSRY--RVPDLEFIRECIKRGIKLTFASDAHR 185 (215)
T ss_pred HHHHHHhCCEEEEeCCC--CCCCHHHHHHHHHcCCEEEEeCCCCC
Confidence 67788899999987531 11122345677788999999999553
No 170
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=75.77 E-value=24 Score=33.79 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=56.3
Q ss_pred HHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCC
Q 017968 28 GIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 103 (363)
Q Consensus 28 ~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (363)
+..++++|+..+.-+.+ .+....++.+++.|.......+..+ .+. .+.+...+- .++....+.+
T Consensus 102 v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~-----~p~---~~~~~~~~~----a~~l~~~Gad 169 (448)
T PRK12331 102 VQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTT-----SPV---HTIDYFVKL----AKEMQEMGAD 169 (448)
T ss_pred HHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeec-----CCC---CCHHHHHHH----HHHHHHcCCC
Confidence 35568889987664422 3456777888888976543333222 111 123333333 3333332223
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCChh
Q 017968 104 RIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPY 145 (363)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~ 145 (363)
.+. +. ......++....++++..++ .++++++|+.++..
T Consensus 170 ~I~--i~-Dt~G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~G 209 (448)
T PRK12331 170 SIC--IK-DMAGILTPYVAYELVKRIKEAVTVPLEVHTHATSG 209 (448)
T ss_pred EEE--Ec-CCCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 332 22 22234567777777776654 57899999887653
No 171
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=74.67 E-value=25 Score=33.89 Aligned_cols=103 Identities=11% Similarity=-0.011 Sum_probs=55.3
Q ss_pred HHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCC
Q 017968 28 GIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 103 (363)
Q Consensus 28 ~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (363)
+..++++|+..+.-+.+ .+....++.+++.|.......+.. . .+ ..+.+. ..++.++....+.+
T Consensus 101 v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t-~----~p---~~t~e~----~~~~a~~l~~~Gad 168 (467)
T PRK14041 101 VKKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHGAHVQGAISYT-V----SP---VHTLEY----YLEFARELVDMGVD 168 (467)
T ss_pred HHHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCCCEEEEEEEec-c----CC---CCCHHH----HHHHHHHHHHcCCC
Confidence 45558889988765432 234566777888887654332221 1 11 112333 33333333332223
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCChh
Q 017968 104 RIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPY 145 (363)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~ 145 (363)
.+. +.. .....++....++++..++ .++++++|+.++..
T Consensus 169 ~I~--i~D-t~G~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~G 208 (467)
T PRK14041 169 SIC--IKD-MAGLLTPKRAYELVKALKKKFGVPVEVHSHCTTG 208 (467)
T ss_pred EEE--ECC-ccCCcCHHHHHHHHHHHHHhcCCceEEEecCCCC
Confidence 332 222 2234567777777776654 57899999887653
No 172
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=71.13 E-value=35 Score=30.00 Aligned_cols=108 Identities=6% Similarity=-0.013 Sum_probs=58.2
Q ss_pred CCCcccccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCc--cccCC-HHH---HHHHHHHHHHc-CCeeeEeccCChh
Q 017968 73 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ--IMNAT-DRL---LLETRDMAREF-KTGIHMHVAEIPY 145 (363)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~-~~~---l~~~~~~a~~~-g~~v~~H~~~~~~ 145 (363)
+|.+.....+.++..+.+.+.++ .+.+.+++...... ....+ .++ +..+++.+++. ++|+.+|......
T Consensus 12 SF~dg~~~~~~~~~~~~a~~~~~----~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~v 87 (257)
T TIGR01496 12 SFSDGGRFLSVDKAVAHAERMLE----EGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEV 87 (257)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH----CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHH
Confidence 34443333344554455444443 23467776432111 11123 334 55666777776 9999999875432
Q ss_pred hHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecC-ChhHHHHHHhCCCeEEEChhh
Q 017968 146 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPAS 203 (363)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~g~~v~~~p~~ 203 (363)
++...+.| ..++-|.... .++-++.+++.|+.++..+..
T Consensus 88 ---------------i~~al~~G----~~iINsis~~~~~~~~~l~~~~~~~vV~m~~~ 127 (257)
T TIGR01496 88 ---------------ARAALEAG----ADIINDVSGGQDPAMLEVAAEYGVPLVLMHMR 127 (257)
T ss_pred ---------------HHHHHHcC----CCEEEECCCCCCchhHHHHHHcCCcEEEEeCC
Confidence 22122222 2356676665 444577888889888887643
No 173
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=70.29 E-value=76 Score=28.37 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=21.6
Q ss_pred HHHHHhCCceEee-cCCcCCH-------HHHHHHHHHcCCeE
Q 017968 28 GIELIHSGVTCFA-EAGGQHV-------SEMAKAVELLGLRA 61 (363)
Q Consensus 28 ~~~~l~~GvTtv~-d~~~~~~-------~~~~~~~~~~gir~ 61 (363)
+.+++..|+|+|+ |.+.... .+..+.++..|+-.
T Consensus 88 i~~ai~~GFtSVM~DgS~lp~eeNi~~T~~vv~~Ah~~gv~V 129 (282)
T TIGR01858 88 IRQKVHAGVRSAMIDGSHFPFAQNVKLVKEVVDFCHRQDCSV 129 (282)
T ss_pred HHHHHHcCCCEEeecCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 4666888999976 5554333 24556667777654
No 174
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=69.02 E-value=38 Score=33.70 Aligned_cols=102 Identities=14% Similarity=0.098 Sum_probs=55.2
Q ss_pred HHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCC
Q 017968 28 GIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 103 (363)
Q Consensus 28 ~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (363)
+..++.+|+..+.-+.. .+....++.+++.|.......+... .+. .+.+.. .++.+++...+.+
T Consensus 97 v~~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~-----~p~---~~~~~~----~~~~~~~~~~Gad 164 (582)
T TIGR01108 97 VKKAVENGMDVFRIFDALNDPRNLQAAIQAAKKHGAHAQGTISYTT-----SPV---HTLETY----LDLAEELLEMGVD 164 (582)
T ss_pred HHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCEEEEEEEecc-----CCC---CCHHHH----HHHHHHHHHcCCC
Confidence 45568889988664422 3355667888888987654433222 111 123333 3333333332223
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCCh
Q 017968 104 RIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 144 (363)
Q Consensus 104 ~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~ 144 (363)
.+. +. ......++....++++..++ .++++++|++++.
T Consensus 165 ~I~--i~-Dt~G~~~P~~v~~lv~~lk~~~~~pi~~H~Hnt~ 203 (582)
T TIGR01108 165 SIC--IK-DMAGILTPKAAYELVSALKKRFGLPVHLHSHATT 203 (582)
T ss_pred EEE--EC-CCCCCcCHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 322 22 22234567777777777654 5788888887753
No 175
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=68.47 E-value=39 Score=33.78 Aligned_cols=103 Identities=15% Similarity=0.074 Sum_probs=55.8
Q ss_pred HHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCC
Q 017968 27 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 102 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
.+.+++++|+..+.-+.+ .+....++.+++.|.......+... .+. .+.+..++-..++ ...+.
T Consensus 101 ~v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~-----~p~---~t~~~~~~~a~~l----~~~Ga 168 (592)
T PRK09282 101 FVEKAAENGIDIFRIFDALNDVRNMEVAIKAAKKAGAHVQGTISYTT-----SPV---HTIEKYVELAKEL----EEMGC 168 (592)
T ss_pred HHHHHHHCCCCEEEEEEecChHHHHHHHHHHHHHcCCEEEEEEEecc-----CCC---CCHHHHHHHHHHH----HHcCC
Confidence 355668889988765432 3345667778888876553332221 111 1333333333333 32222
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCCh
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 144 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~ 144 (363)
+.+. +. .......+..+.++++..++ .++++++|++++.
T Consensus 169 d~I~--i~-Dt~G~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~ 208 (592)
T PRK09282 169 DSIC--IK-DMAGLLTPYAAYELVKALKEEVDLPVQLHSHCTS 208 (592)
T ss_pred CEEE--EC-CcCCCcCHHHHHHHHHHHHHhCCCeEEEEEcCCC
Confidence 3222 22 22234567777778777665 5788888887753
No 176
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=65.48 E-value=21 Score=30.75 Aligned_cols=111 Identities=11% Similarity=0.091 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHH--hCCCCCCeeEEEeecCChhH-HHHHHhCCCe
Q 017968 120 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK--IEFLQNNLLSAHTVWVNHTE-IGLLSRAGVK 196 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~-~~~~~~~g~~ 196 (363)
..+--+++...+.|+++.+|-.-....... .+.++...+..+.. ..+-...+++.||...+..+ ++-+++..+.
T Consensus 117 ~~fyPvf~aMqe~nm~LnvHGEvpps~D~~---Vf~aE~~Flptll~LhqrfP~LKivlEHcTt~dAv~~ve~a~~~sVa 193 (344)
T KOG2902|consen 117 GKFYPVFEAMQEQNMPLNVHGEVPPSIDGH---VFDAEKIFLPTLLQLHQRFPQLKIVLEHCTTMDAVNFVESAKEGSVA 193 (344)
T ss_pred hhhhHHHHHHHHcCceEEecCCCCCccCCc---eecchhhhHHHHHHHHHhCccceeHHHhcccHHHHHHHHhhcCCcee
Confidence 345566777888999999997543221100 11111112222222 22333457888988766544 3334444555
Q ss_pred EEEChhhhccc-------------------cCcccHHHHHHcCC-eEEEecCCCCCC
Q 017968 197 VSHCPASAMRM-------------------LGFAPIKEMLHADI-CVSLGTDGAPSN 233 (363)
Q Consensus 197 v~~~p~~~~~~-------------------~~~~~~~~~l~~G~-~~~lgTD~~~~~ 233 (363)
.++++++-+-. .+..++.++.-.|- ...+|||.+|++
T Consensus 194 aTvTahHL~Lt~~dwqg~P~nfCkPVaK~e~dr~AlvkAatSg~pkFFfGsDSAPHp 250 (344)
T KOG2902|consen 194 ATVTAHHLLLTRNDWQGQPHNFCKPVAKREIDREALVKAATSGSPKFFFGSDSAPHP 250 (344)
T ss_pred eEeehheeEEehhhhcCCCcccccccccCcccHHHHHHHHhcCCCceeecCCCCCCc
Confidence 56666543111 12233444444565 789999999876
No 177
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=63.96 E-value=98 Score=27.77 Aligned_cols=34 Identities=6% Similarity=0.260 Sum_probs=18.5
Q ss_pred HHHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeE
Q 017968 28 GIELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRA 61 (363)
Q Consensus 28 ~~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~ 61 (363)
+.++++.|+|+|+ |.+...++ ++.+.++..|+-.
T Consensus 93 i~~ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gv~V 134 (288)
T TIGR00167 93 CAQAVKAGFSSVMIDGSHEPFEENIELTKKVVERAHKMGVSV 134 (288)
T ss_pred HHHHHHcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 4445777888865 54433332 3444555556544
No 178
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed
Probab=63.52 E-value=1.2e+02 Score=27.87 Aligned_cols=111 Identities=15% Similarity=0.193 Sum_probs=61.3
Q ss_pred HHHHhCCceEee-cCCc-----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCC
Q 017968 29 IELIHSGVTCFA-EAGG-----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 102 (363)
Q Consensus 29 ~~~l~~GvTtv~-d~~~-----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
.+++..|+-.++ +.++ +.+..+++++++.++-+..+...-.-...+-..++....+...+-..+.++.......
T Consensus 95 l~a~~~G~~~iRINPGNig~~~~~v~~vv~~ak~~~ipIRIGvN~GSL~~~~~~~yg~~t~eamveSAl~~~~~le~~~f 174 (360)
T PRK00366 95 LAAAEAGADALRINPGNIGKRDERVREVVEAAKDYGIPIRIGVNAGSLEKDLLEKYGEPTPEALVESALRHAKILEELGF 174 (360)
T ss_pred HHHHHhCCCEEEECCCCCCchHHHHHHHHHHHHHCCCCEEEecCCccChHHHHHHcCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 344888999887 3443 2356788899999988766544321100011122222344444444444444433333
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCC
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 143 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 143 (363)
..+.+-+..+. ....++....++++.+.|+|+-+.|.
T Consensus 175 ~~iviS~KsS~----v~~~i~ayrlla~~~dyPLHlGvTEA 211 (360)
T PRK00366 175 DDIKISVKASD----VQDLIAAYRLLAKRCDYPLHLGVTEA 211 (360)
T ss_pred CcEEEEEEcCC----HHHHHHHHHHHHhcCCCCceecccCC
Confidence 33444333222 34567777778888999988877664
No 179
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=63.32 E-value=1.1e+02 Score=27.33 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=21.3
Q ss_pred HHHHHHhCCceEee-cCCcCCH-------HHHHHHHHHcCCeE
Q 017968 27 CGIELIHSGVTCFA-EAGGQHV-------SEMAKAVELLGLRA 61 (363)
Q Consensus 27 ~~~~~l~~GvTtv~-d~~~~~~-------~~~~~~~~~~gir~ 61 (363)
.+.++++.|+|+|+ |.+...+ .++.+.++..|+..
T Consensus 89 ~i~~Ai~~GftSVM~DgS~l~~eeNi~~T~~vv~~Ah~~gv~V 131 (284)
T PRK09195 89 DIAQKVRSGVRSVMIDGSHLPFAQNISLVKEVVDFCHRFDVSV 131 (284)
T ss_pred HHHHHHHcCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 34556888999876 5554333 24456666767554
No 180
>PRK09248 putative hydrolase; Validated
Probab=61.92 E-value=1.1e+02 Score=26.60 Aligned_cols=45 Identities=20% Similarity=0.067 Sum_probs=30.2
Q ss_pred HHHHHhCCCeEEEChhhhc--cc----cCcccHHHHHHcCCeEEEecCCCC
Q 017968 187 IGLLSRAGVKVSHCPASAM--RM----LGFAPIKEMLHADICVSLGTDGAP 231 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~--~~----~~~~~~~~~l~~G~~~~lgTD~~~ 231 (363)
++.+++.|+.++++-.+.. +. .....+..+.+.|+++++|||.+.
T Consensus 146 ~~~~~~~g~~lEvN~~~l~~~~~g~~~~~~~~~~~~~~~g~~~~~gSDAH~ 196 (246)
T PRK09248 146 VKAAKEHNVALEINNSSFGHSRKGSEDNCRAIAALCKKAGVWVALGSDAHI 196 (246)
T ss_pred HHHHHHhCCEEEEECCCCccCCCCCcChHHHHHHHHHHcCCeEEEeCCCCC
Confidence 5777888998888765431 11 112234566778999999999653
No 181
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=61.78 E-value=63 Score=32.30 Aligned_cols=103 Identities=15% Similarity=0.097 Sum_probs=54.6
Q ss_pred HHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCC
Q 017968 27 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 102 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
.+..++++|+..++-+.. .++...++.+++.|.......+... . | . .+. +...++.++....+.
T Consensus 102 ~v~~a~~~Gid~~rifd~lnd~~~~~~ai~~ak~~G~~~~~~i~yt~-~---p-~---~~~----~~~~~~a~~l~~~Ga 169 (593)
T PRK14040 102 FVERAVKNGMDVFRVFDAMNDPRNLETALKAVRKVGAHAQGTLSYTT-S---P-V---HTL----QTWVDLAKQLEDMGV 169 (593)
T ss_pred HHHHHHhcCCCEEEEeeeCCcHHHHHHHHHHHHHcCCeEEEEEEEee-C---C-c---cCH----HHHHHHHHHHHHcCC
Confidence 345568899998765432 2345667888888876432222221 1 1 1 122 333333333333222
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCCh
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 144 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~ 144 (363)
..+. +.. ......+..+.++++..++ .++++++|++++.
T Consensus 170 d~i~--i~D-t~G~l~P~~~~~lv~~lk~~~~~pi~~H~Hnt~ 209 (593)
T PRK14040 170 DSLC--IKD-MAGLLKPYAAYELVSRIKKRVDVPLHLHCHATT 209 (593)
T ss_pred CEEE--ECC-CCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 3222 222 2234566777777766654 5788888887753
No 182
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=59.61 E-value=1.3e+02 Score=26.91 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=19.2
Q ss_pred HHHHHhCCceEee-cCCcCCH-------HHHHHHHHHcCCeE
Q 017968 28 GIELIHSGVTCFA-EAGGQHV-------SEMAKAVELLGLRA 61 (363)
Q Consensus 28 ~~~~l~~GvTtv~-d~~~~~~-------~~~~~~~~~~gir~ 61 (363)
+.++++.|+|+|+ |.+...+ +++++.++..|+-.
T Consensus 93 i~~ai~~GftSVM~DgS~lp~eeNi~~Trevv~~Ah~~gv~V 134 (285)
T PRK07709 93 CKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSV 134 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 3455777888865 5443333 24455566666554
No 183
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]
Probab=58.53 E-value=1e+02 Score=31.82 Aligned_cols=112 Identities=14% Similarity=0.094 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCC-CcccccCChHHHHHHHHHHHHHh
Q 017968 23 STLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGL-PASWAVRTTDDCIQSQKELYAKH 97 (363)
Q Consensus 23 ~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 97 (363)
..+..++++.++||--++-+-. .+++..+++..+.| ...-...+++. +-+ |.+..+ +. +....+.+++
T Consensus 631 Vi~~Fvkqaa~~GIDvFRiFDsLNwv~~M~vaidAV~e~g-kv~EatiCYTG-Dildp~r~kY-~L----~YY~~lA~el 703 (1149)
T COG1038 631 VIREFVKQAAKSGIDVFRIFDSLNWVEQMRVAIDAVREAG-KVAEATICYTG-DILDPGRKKY-TL----DYYVKLAKEL 703 (1149)
T ss_pred HHHHHHHHHHhcCccEEEeehhhcchhhhhhHHHHHHhcC-CeEEEEEEecc-ccCCCCcccc-cH----HHHHHHHHHH
Confidence 3455677778899888765533 34456677888888 44444444432 212 222222 33 4444444443
Q ss_pred cCCCCCCeEEEeccCcc-ccCCHHHHHHHHHHH-HHcCCeeeEeccCChh
Q 017968 98 HHAADGRIRIWFGIRQI-MNATDRLLLETRDMA-REFKTGIHMHVAEIPY 145 (363)
Q Consensus 98 ~~~~~~~v~~~~~~~~~-~~~~~~~l~~~~~~a-~~~g~~v~~H~~~~~~ 145 (363)
...+. .+ +++-.+ .-.-+....+++... .+.++|+|+|..++..
T Consensus 704 ~~~Ga-HI---laIKDMAGLLKP~AA~~Li~aLr~~~dlPIHlHTHDTsG 749 (1149)
T COG1038 704 EKAGA-HI---LAIKDMAGLLKPAAAYRLISALRETVDLPIHLHTHDTSG 749 (1149)
T ss_pred HhcCC-cE---EEehhhhhccCHHHHHHHHHHHHHhcCCceEEeccCCCc
Confidence 32211 11 111111 011223333444333 4579999999987653
No 184
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=57.58 E-value=1.4e+02 Score=26.69 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=17.4
Q ss_pred HHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeE
Q 017968 29 IELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRA 61 (363)
Q Consensus 29 ~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~ 61 (363)
.++++.|+|+|+ |.+...++ .+++.++..|+-.
T Consensus 94 ~~ai~~GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~gv~V 134 (286)
T PRK08610 94 KEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSV 134 (286)
T ss_pred HHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 444777777765 54433332 4445555555543
No 185
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=56.45 E-value=96 Score=28.87 Aligned_cols=107 Identities=14% Similarity=0.100 Sum_probs=58.1
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCCcC-----CHHHHHHH---HHHcCCeEEEecccccCCCCCCcccccCChHHHH
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKA---VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCI 87 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~---~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
..+++.+.++++ +.+||||+++|... ..+.+... +++.....+...+.+... .....+
T Consensus 30 ~~e~~~s~s~aA----~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 95 (374)
T cd01317 30 YKETLESGAKAA----AAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGIVRVLPIGALTKG----------LKGEEL 95 (374)
T ss_pred ccchHHHHHHHH----HhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCceeEEEEEEEeeC----------CCcccH
Confidence 467889999998 99999999999642 22333222 222222112112222110 001112
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCCh
Q 017968 88 QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 144 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 144 (363)
+++.++.+ .|... +........+...+.++++.+++.|.++.+|+.+..
T Consensus 96 ~~i~~l~~------~G~~~--~k~~~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~ 144 (374)
T cd01317 96 TEIGELLE------AGAVG--FSDDGKPIQDAELLRRALEYAAMLDLPIIVHPEDPS 144 (374)
T ss_pred HHHHHHHH------CCcEE--EEcCCcCCCCHHHHHHHHHHHHhcCCeEEEecCChh
Confidence 23333322 12221 222222235678899999999999999999995433
No 186
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=56.12 E-value=1.5e+02 Score=26.52 Aligned_cols=121 Identities=7% Similarity=0.030 Sum_probs=0.0
Q ss_pred HHHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcC
Q 017968 28 GIELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH 99 (363)
Q Consensus 28 ~~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (363)
+.++++.|+|+|+ |.+...++ ++.+.++..|+..=--.+.+-...+--............++..+++++-.
T Consensus 90 i~~ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gvsVEaElG~igg~e~~~~~~~~~~~~T~peeA~~Fv~~Tg- 168 (284)
T PRK12737 90 IKKKVRAGIRSVMIDGSHLSFEENIAIVKEVVEFCHRYDASVEAELGRLGGQEDDLVVDEKDAMYTNPDAAAEFVERTG- 168 (284)
T ss_pred HHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccccccCCCHHHHHHHHHHhC-
Q ss_pred CCCCCeEEEecc-CccccCCHHH-HHHHHHHHHHcCCeeeEeccCChhhHHHHH
Q 017968 100 AADGRIRIWFGI-RQIMNATDRL-LLETRDMAREFKTGIHMHVAEIPYENQVVM 151 (363)
Q Consensus 100 ~~~~~v~~~~~~-~~~~~~~~~~-l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~ 151 (363)
-+.+.+.++. |+.....+.. ++.+.+..+..++|+.+|=+.+..+.+...
T Consensus 169 --vD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~~~~iPLVlHGgSG~~~e~~~k 220 (284)
T PRK12737 169 --IDSLAVAIGTAHGLYKGEPKLDFERLAEIREKVSIPLVLHGASGVPDEDVKK 220 (284)
T ss_pred --CCEEeeccCccccccCCCCcCCHHHHHHHHHHhCCCEEEeCCCCCCHHHHHH
No 187
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=55.55 E-value=1.5e+02 Score=26.26 Aligned_cols=72 Identities=10% Similarity=0.081 Sum_probs=43.1
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhh------cCCCCChHHHHHHhCCCCCCeeEEEeecCChhHH
Q 017968 115 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT------RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 187 (363)
Q Consensus 115 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 187 (363)
.....+.++.+.+++++.|+++.+-..+... .+...+. ......-...++..+-.+..+++.-+...+.+++
T Consensus 73 ~G~g~~gl~~l~~~~~~~Gl~~~te~~d~~~-~~~l~~~vd~~kIga~~~~n~~LL~~~a~~gkPV~lk~G~~~s~~e~ 150 (266)
T PRK13398 73 QGLGEEGLKILKEVGDKYNLPVVTEVMDTRD-VEEVADYADMLQIGSRNMQNFELLKEVGKTKKPILLKRGMSATLEEW 150 (266)
T ss_pred CCcHHHHHHHHHHHHHHcCCCEEEeeCChhh-HHHHHHhCCEEEECcccccCHHHHHHHhcCCCcEEEeCCCCCCHHHH
Confidence 3345788999999999999999886654432 2222221 0111112345666666666677777766666653
No 188
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=55.32 E-value=1.5e+02 Score=26.28 Aligned_cols=27 Identities=19% Similarity=0.192 Sum_probs=13.0
Q ss_pred CCHHHHHHHHHHHHH-cCCeeeEeccCC
Q 017968 117 ATDRLLLETRDMARE-FKTGIHMHVAEI 143 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~-~g~~v~~H~~~~ 143 (363)
.+++.+.++++..++ .++++.+|+.++
T Consensus 175 ~~P~~v~~lv~~l~~~~~~~l~~H~Hnd 202 (275)
T cd07937 175 LTPYAAYELVKALKKEVGLPIHLHTHDT 202 (275)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEecCC
Confidence 344555555544443 245555555443
No 189
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=54.58 E-value=1.6e+02 Score=26.37 Aligned_cols=125 Identities=10% Similarity=-0.013 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHH
Q 017968 24 TLLCGIELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 95 (363)
Q Consensus 24 ~~~~~~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (363)
+...+.++++.|+|+|+ |.+....+ ++.+.++..|+-.=--.+.+-....-.............++..++++
T Consensus 86 ~~e~i~~ai~~GFtSVM~DgS~lp~eeNi~~T~evv~~Ah~~gv~VEaElG~igg~ed~~~~~~~~~~~T~peea~~Fv~ 165 (286)
T PRK12738 86 SLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVE 165 (286)
T ss_pred CHHHHHHHHHcCCCeEeecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEeeCCccCCcccccchhcCCCHHHHHHHHH
Q ss_pred HhcCCCCCCeEEEecc-CccccCCHHH-HHHHHHHHHHcCCeeeEeccCChhhHHHHH
Q 017968 96 KHHHAADGRIRIWFGI-RQIMNATDRL-LLETRDMAREFKTGIHMHVAEIPYENQVVM 151 (363)
Q Consensus 96 ~~~~~~~~~v~~~~~~-~~~~~~~~~~-l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~ 151 (363)
+-. -+.+.+.++. |+.....+.. ++.+-+..+..++|+.+|=+.+....+...
T Consensus 166 ~Tg---vD~LAvaiGt~HG~Y~~~p~Ldfd~l~~I~~~~~vPLVLHGgSG~~~e~~~k 220 (286)
T PRK12738 166 LTG---VDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRR 220 (286)
T ss_pred HhC---CCEEEeccCcccCCCCCCCcCCHHHHHHHHHHhCCCEEEeCCCCCCHHHHHH
No 190
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=54.54 E-value=1.7e+02 Score=26.74 Aligned_cols=108 Identities=15% Similarity=0.119 Sum_probs=60.6
Q ss_pred HhCCceEee-cCCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeE
Q 017968 32 IHSGVTCFA-EAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 106 (363)
Q Consensus 32 l~~GvTtv~-d~~~----~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 106 (363)
+..|+-.++ +.++ +.+..+++++++.++-+..+...-.-...+-..++....+...+-..+.++.........+.
T Consensus 90 ~~~g~dkiRINPGNig~~e~v~~vv~~ak~~~ipIRIGVN~GSL~~~~~~kyg~~t~eamveSAl~~v~~le~~~F~div 169 (346)
T TIGR00612 90 MAKGVAKVRINPGNIGFRERVRDVVEKARDHGKAMRIGVNHGSLERRLLEKYGDATAEAMVQSALEEAAILEKLGFRNVV 169 (346)
T ss_pred HHhccCeEEECCCCCCCHHHHHHHHHHHHHCCCCEEEecCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHCCCCcEE
Confidence 788888887 3433 34568889999999887665443211100111222224444444444444443333333344
Q ss_pred EEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCC
Q 017968 107 IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 143 (363)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 143 (363)
+-+..+. ....++....++++.+.|+|+-+.|.
T Consensus 170 iS~KsSd----v~~~i~ayr~la~~~dyPLHlGVTEA 202 (346)
T TIGR00612 170 LSMKASD----VAETVAAYRLLAERSDYPLHLGVTEA 202 (346)
T ss_pred EEEEcCC----HHHHHHHHHHHHhhCCCCceeccccC
Confidence 4333222 34567777778888999988877664
No 191
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=53.94 E-value=1.6e+02 Score=26.27 Aligned_cols=35 Identities=11% Similarity=0.146 Sum_probs=19.9
Q ss_pred HHHHHHhCCceEee-cCCcCCH-------HHHHHHHHHcCCeE
Q 017968 27 CGIELIHSGVTCFA-EAGGQHV-------SEMAKAVELLGLRA 61 (363)
Q Consensus 27 ~~~~~l~~GvTtv~-d~~~~~~-------~~~~~~~~~~gir~ 61 (363)
.+.++++.|+|+|+ |.+.... .+..+.++..|+-.
T Consensus 89 ~i~~Ai~~GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~gv~V 131 (283)
T PRK07998 89 DVKQAVRAGFTSVMIDGAALPFEENIAFTKEAVDFAKSYGVPV 131 (283)
T ss_pred HHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 34455777888875 4443332 24455666667643
No 192
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=53.61 E-value=1.7e+02 Score=26.28 Aligned_cols=115 Identities=9% Similarity=0.085 Sum_probs=54.7
Q ss_pred HHHHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeEEEecccccCC-CCCCcccccCChHHHHHHHHHHHHHh
Q 017968 27 CGIELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRACLVQSTMDCG-EGLPASWAVRTTDDCIQSQKELYAKH 97 (363)
Q Consensus 27 ~~~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (363)
.+.+++..|+|+|+ |.+...++ .+.+.++..|+-.=--.+.+-.. ++..............++..+++++-
T Consensus 88 ~i~~ai~~GftSVM~DgS~l~~eeNi~~T~~vv~~ah~~gv~VEaElG~i~g~ed~~~~~~~~~~~~TdP~~a~~Fv~~T 167 (287)
T PF01116_consen 88 DIKRAIDAGFTSVMIDGSALPFEENIAITREVVEYAHAYGVSVEAELGHIGGKEDGIESEEETESLYTDPEEAKEFVEET 167 (287)
T ss_dssp HHHHHHHHTSSEEEEE-TTS-HHHHHHHHHHHHHHHHHTT-EEEEEESBSSSSCTTCSSSTT-TTCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCcccccccCCcCCHHHHHHHHHHHHHhhhhhCCEEEEEeeeeeccCCCccccccccccccCHHHHHHHHHHh
Confidence 34556888999976 66544443 55667888886654333333211 12111100011222345667776654
Q ss_pred cCCCCCCeEEEecc-CccccC--CHH-HHHHHHHHHHHc-CCeeeEeccCCh
Q 017968 98 HHAADGRIRIWFGI-RQIMNA--TDR-LLLETRDMAREF-KTGIHMHVAEIP 144 (363)
Q Consensus 98 ~~~~~~~v~~~~~~-~~~~~~--~~~-~l~~~~~~a~~~-g~~v~~H~~~~~ 144 (363)
. -+.+.+.++. |+.... .+. -++.+.+..+.. ++|+.+|=+.+.
T Consensus 168 g---vD~LAvaiGt~HG~y~~~~~p~Ld~~~L~~I~~~~~~iPLVlHGgSG~ 216 (287)
T PF01116_consen 168 G---VDALAVAIGTAHGMYKGGKKPKLDFDRLKEIREAVPDIPLVLHGGSGL 216 (287)
T ss_dssp T---TSEEEE-SSSBSSSBSSSSSTC--HHHHHHHHHHHHTSEEEESSCTTS
T ss_pred C---CCEEEEecCccccccCCCCCcccCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 2 2334444432 333222 121 244444555555 889888876433
No 193
>PRK13404 dihydropyrimidinase; Provisional
Probab=50.28 E-value=1.3e+02 Score=29.27 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeE-eccCC
Q 017968 118 TDRLLLETRDMAREFKTGIHM-HVAEI 143 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~-H~~~~ 143 (363)
....+.+++.+|++.|.++|+ |++..
T Consensus 219 E~~~v~~~~~la~~~g~~~hi~Hvs~~ 245 (477)
T PRK13404 219 EREATHRAIALAELVDVPILIVHVSGR 245 (477)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCH
Confidence 345678888999999999955 88643
No 194
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=50.09 E-value=1.6e+02 Score=24.93 Aligned_cols=60 Identities=12% Similarity=0.035 Sum_probs=34.9
Q ss_pred ccccccCcCCCCchhHHHHHHHHHHHHHhCCceEee-cCCcCCHHHHHHHHHHcCCeEEEecccc
Q 017968 5 HDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA-EAGGQHVSEMAKAVELLGLRACLVQSTM 68 (363)
Q Consensus 5 ~~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~gir~~~~~~~~ 68 (363)
+....|+-+..++|+....+++. +.+|++.+. .+.+......++...+..-+...+.+++
T Consensus 7 ~~~liaVlr~~~~e~a~~~~~al----~~~Gi~~iEit~~t~~a~~~i~~l~~~~~~~~vGAGTV 67 (204)
T TIGR01182 7 EAKIVPVIRIDDVDDALPLAKAL----IEGGLRVLEVTLRTPVALDAIRLLRKEVPDALIGAGTV 67 (204)
T ss_pred hCCEEEEEecCCHHHHHHHHHHH----HHcCCCEEEEeCCCccHHHHHHHHHHHCCCCEEEEEeC
Confidence 34556666777788766666655 888999775 3444444444444433333555555544
No 195
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=49.69 E-value=1.4e+02 Score=27.54 Aligned_cols=28 Identities=11% Similarity=-0.039 Sum_probs=15.2
Q ss_pred CCHHHHHHHHHHHHHc---CCeeeEeccCCh
Q 017968 117 ATDRLLLETRDMAREF---KTGIHMHVAEIP 144 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~---g~~v~~H~~~~~ 144 (363)
..++.+.++++..++. ++++.+|..++.
T Consensus 170 ~~P~~v~~~v~~l~~~l~~~i~ig~H~Hnnl 200 (337)
T PRK08195 170 LLPEDVRDRVRALRAALKPDTQVGFHGHNNL 200 (337)
T ss_pred CCHHHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence 4455555666555543 455666665543
No 196
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=49.50 E-value=1.8e+02 Score=25.47 Aligned_cols=116 Identities=12% Similarity=0.156 Sum_probs=64.2
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhh------cCCCCChHHHHHHhCCCCCCeeEEEeecCChhHH-
Q 017968 115 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT------RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI- 187 (363)
Q Consensus 115 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~- 187 (363)
.....+.++.+.+.++++|+++..-..+... .+...+. ......-...++..+-.+..+++.-+...+.+|+
T Consensus 61 ~G~G~~gl~~L~~~~~~~Gl~~~Tev~d~~~-v~~~~e~vdilqIgs~~~~n~~LL~~va~tgkPVilk~G~~~t~~e~~ 139 (250)
T PRK13397 61 QGLGLQGIRYLHEVCQEFGLLSVSEIMSERQ-LEEAYDYLDVIQVGARNMQNFEFLKTLSHIDKPILFKRGLMATIEEYL 139 (250)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeeCCHHH-HHHHHhcCCEEEECcccccCHHHHHHHHccCCeEEEeCCCCCCHHHHH
Confidence 4446678999999999999999886654332 2222221 0111113456666666677777777777777763
Q ss_pred ---HHHHhCCC-eEEEChhh----h--cc-ccCcccHHHHHH-cCCeEEEecCCCC
Q 017968 188 ---GLLSRAGV-KVSHCPAS----A--MR-MLGFAPIKEMLH-ADICVSLGTDGAP 231 (363)
Q Consensus 188 ---~~~~~~g~-~v~~~p~~----~--~~-~~~~~~~~~~l~-~G~~~~lgTD~~~ 231 (363)
+.+++.|. .+..|... + .+ ..+...+..+.+ -++++.++.-|..
T Consensus 140 ~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~ 195 (250)
T PRK13397 140 GALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHST 195 (250)
T ss_pred HHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCC
Confidence 44555443 34444311 1 11 122233344444 5677777644653
No 197
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain. Citramalate synthase (CMS) catalyzes the conversion of pyruvate and acetyl-CoA to (R)-citramalate in the first dedicated step of the citramalate pathway. Citramalate is only found in Leptospira interrogans and a few other microorganisms. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center con
Probab=49.36 E-value=1.9e+02 Score=25.74 Aligned_cols=58 Identities=10% Similarity=0.108 Sum_probs=29.2
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCc-cccCCHHHHHHHHHHHHHcCCeeeEec
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTGIHMHV 140 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~ 140 (363)
+.++.++.+.+.++..+..+ ..+.+.+...+ +...+++.+.++++.+.+.|.....-+
T Consensus 109 t~~e~l~~~~~~i~~a~~~G-~~v~~~~~d~~~~~r~~~~~~~~~~~~~~~~G~~~i~l~ 167 (280)
T cd07945 109 TPEEHFADIREVIEYAIKNG-IEVNIYLEDWSNGMRDSPDYVFQLVDFLSDLPIKRIMLP 167 (280)
T ss_pred CHHHHHHHHHHHHHHHHhCC-CEEEEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCEEEec
Confidence 34555566666655554332 12333222111 124466777777777777776543333
No 198
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=48.65 E-value=1.5e+02 Score=26.11 Aligned_cols=25 Identities=8% Similarity=0.053 Sum_probs=11.0
Q ss_pred CHHHHHHHHHHHHHc-C--CeeeEeccC
Q 017968 118 TDRLLLETRDMAREF-K--TGIHMHVAE 142 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~-g--~~v~~H~~~ 142 (363)
+++.+.++++..++. + +++.+|+.+
T Consensus 165 ~P~~v~~lv~~l~~~~~~~~~i~~H~Hn 192 (266)
T cd07944 165 YPEDIKRIISLLRSNLDKDIKLGFHAHN 192 (266)
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEeCC
Confidence 444444444444332 2 445555443
No 199
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=48.16 E-value=1.9e+02 Score=25.42 Aligned_cols=115 Identities=13% Similarity=0.115 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhh------cCCCCChHHHHHHhCCCCCCeeEEEeecCChhHH---
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT------RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI--- 187 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~--- 187 (363)
...+.++.+.+++++.|+++..-..+... .+...+. ......-...++..+-.+..+++.-+...+.+|+
T Consensus 73 ~g~~gl~~l~~~~~~~Gl~~~t~~~d~~~-~~~l~~~~d~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~A 151 (260)
T TIGR01361 73 LGEEGLKLLRRAADEHGLPVVTEVMDPRD-VEIVAEYADILQIGARNMQNFELLKEVGKQGKPVLLKRGMGNTIEEWLYA 151 (260)
T ss_pred cHHHHHHHHHHHHHHhCCCEEEeeCChhh-HHHHHhhCCEEEECcccccCHHHHHHHhcCCCcEEEeCCCCCCHHHHHHH
Confidence 35778899999999999998876654332 1222111 1111112345566666666677777766666553
Q ss_pred -HHHHhCCC-eEEEChh-h-hc----cc-cCcccHHHHHHc-CCeEEEecCCCCC
Q 017968 188 -GLLSRAGV-KVSHCPA-S-AM----RM-LGFAPIKEMLHA-DICVSLGTDGAPS 232 (363)
Q Consensus 188 -~~~~~~g~-~v~~~p~-~-~~----~~-~~~~~~~~~l~~-G~~~~lgTD~~~~ 232 (363)
+.+++.|. .+.+|.. . .. +. .+...+..+.+. ++++++-+||..+
T Consensus 152 ve~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 152 AEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 44444443 2333221 1 11 11 233444455443 7777777777643
No 200
>PRK12999 pyruvate carboxylase; Reviewed
Probab=48.05 E-value=1.5e+02 Score=32.34 Aligned_cols=108 Identities=16% Similarity=0.055 Sum_probs=55.3
Q ss_pred HHHHHHhCCceEeecCCc----CCHHHHHHHHHHcCCeEEEecccc-cCCCCCCcccccCChHHHHHHHHHHHHHhcCCC
Q 017968 27 CGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTM-DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 101 (363)
Q Consensus 27 ~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (363)
.+..+.++|+..+.-+-. .+++..++.+++.|.......+.. |.. ++.....+.+...+ +.+++...+
T Consensus 632 ~i~~a~~~Gid~~rifd~lnd~~~~~~~i~~vk~~g~~~~~~i~ytg~~~---d~~~~~~~~~~~~~----~a~~l~~~G 704 (1146)
T PRK12999 632 FVREAAAAGIDVFRIFDSLNWVENMRVAIDAVRETGKIAEAAICYTGDIL---DPARAKYDLDYYVD----LAKELEKAG 704 (1146)
T ss_pred HHHHHHHcCCCEEEEeccCChHHHHHHHHHHHHHcCCeEEEEEEEEecCC---CCCCCCCCHHHHHH----HHHHHHHcC
Confidence 355668899999875533 234566677778886433333322 111 11111113333333 333333222
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHH-cCCeeeEeccCCh
Q 017968 102 DGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIP 144 (363)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~ 144 (363)
...+. +.. .....++....++++..++ .++++++|+.++.
T Consensus 705 a~~i~--ikD-t~G~l~P~~~~~lv~~lk~~~~ipi~~H~Hnt~ 745 (1146)
T PRK12999 705 AHILA--IKD-MAGLLKPAAAYELVSALKEEVDLPIHLHTHDTS 745 (1146)
T ss_pred CCEEE--ECC-ccCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCC
Confidence 23222 222 2234566777777776654 5899999987754
No 201
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=46.44 E-value=2.3e+02 Score=25.73 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=19.7
Q ss_pred HHHHHhCCceEee-cCCcCCH-------HHHHHHHHHcCCeE
Q 017968 28 GIELIHSGVTCFA-EAGGQHV-------SEMAKAVELLGLRA 61 (363)
Q Consensus 28 ~~~~l~~GvTtv~-d~~~~~~-------~~~~~~~~~~gir~ 61 (363)
+.+++..|+|+|+ |.+.... ....+.++..|+-.
T Consensus 90 i~~ai~~GftSVM~DgS~l~~eeNi~~T~~vve~Ah~~gv~V 131 (307)
T PRK05835 90 CEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSV 131 (307)
T ss_pred HHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 4455888888875 5543333 24455566666554
No 202
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain. 4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate
Probab=44.41 E-value=2e+02 Score=25.28 Aligned_cols=19 Identities=16% Similarity=0.256 Sum_probs=9.2
Q ss_pred CCHHHHHHHHHHHHHcCCe
Q 017968 117 ATDRLLLETRDMAREFKTG 135 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~ 135 (363)
.+++.+.++++.+.+.|..
T Consensus 138 ~~~~~~~~~~~~~~~~G~d 156 (263)
T cd07943 138 ASPEELAEQAKLMESYGAD 156 (263)
T ss_pred CCHHHHHHHHHHHHHcCCC
Confidence 3444444555555554444
No 203
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=44.28 E-value=2.3e+02 Score=25.22 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=18.5
Q ss_pred HHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeE
Q 017968 29 IELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRA 61 (363)
Q Consensus 29 ~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~ 61 (363)
.++++.|+|+++ |.+...++ ++.+.++..|+-.
T Consensus 86 ~~ai~~GftSVMiD~S~l~~eeNi~~t~~vv~~ah~~gv~V 126 (276)
T cd00947 86 KRAIRAGFSSVMIDGSHLPFEENVAKTKEVVELAHAYGVSV 126 (276)
T ss_pred HHHHHhCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 344777888765 55443332 4455566666554
No 204
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=42.34 E-value=63 Score=27.26 Aligned_cols=114 Identities=17% Similarity=0.234 Sum_probs=51.9
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecC
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 182 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 182 (363)
|..+++++...-...+...+.++.+ .++.|..+.+-..++..-.+ ..+.++.+..+-...+--++..+
T Consensus 4 GrLkIflG~apGVGKTy~ML~ea~~-l~~~G~DVViG~vethgR~e-----------t~~l~~gLe~iP~~~i~y~g~~~ 71 (211)
T PF02702_consen 4 GRLKIFLGAAPGVGKTYAMLQEAHR-LKEQGVDVVIGYVETHGRPE-----------TEALLEGLEVIPRKKIEYRGRTL 71 (211)
T ss_dssp --EEEEEESSTTSSHHHHHHHHHHH-HHHTT--EEEEE---TT-HH-----------HHHHHCTS-B---EEEEETTEEE
T ss_pred ccEEEEEecCCCCCHHHHHHHHHHH-HHHCCCCEEEEEecCCCcHH-----------HHHHHcCCCcCCCeeEeeCCEec
Confidence 6788888765544455566665544 46678888776655432111 22222333333333333344455
Q ss_pred ChhHHHHHHhCCCeEEEC---hhhhc---cc-cCcccHHHHHHcCCeEEEecC
Q 017968 183 NHTEIGLLSRAGVKVSHC---PASAM---RM-LGFAPIKEMLHADICVSLGTD 228 (363)
Q Consensus 183 ~~~~~~~~~~~g~~v~~~---p~~~~---~~-~~~~~~~~~l~~G~~~~lgTD 228 (363)
.+-+++.+.++.-.++.. .++|. +. +.+..+.+++++|+.+.-..+
T Consensus 72 ~E~DldaiL~R~P~vvLVDELAHtN~pgsr~~kR~qDVeeLL~aGIdV~TTlN 124 (211)
T PF02702_consen 72 EEMDLDAILARRPQVVLVDELAHTNAPGSRHKKRYQDVEELLDAGIDVYTTLN 124 (211)
T ss_dssp EE--HHHHHHH--SEEEES-TT-B--TT-SSSBHHHHHHHHHHTT-EEEEEEE
T ss_pred ccCCHHHHHhcCCCEEEeCcccccCCCCCCCcccHHhHHHHHHCCCeEEEeee
Confidence 555666555555444432 22222 22 567889999999997664443
No 205
>PRK06740 histidinol-phosphatase; Validated
Probab=42.24 E-value=51 Score=30.21 Aligned_cols=44 Identities=9% Similarity=0.101 Sum_probs=30.9
Q ss_pred HHHHHhCCCeEEEChhhhccc--cCc----ccHHHHHHcCCeEEEecCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRM--LGF----APIKEMLHADICVSLGTDGA 230 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~--~~~----~~~~~~l~~G~~~~lgTD~~ 230 (363)
++.+++.|+.++++..+..+. ... .-+..+.+.|+++++|||.+
T Consensus 245 ~~a~~~~g~~lEINt~~~~r~~~~e~yP~~~il~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 245 ARALVETNTATEINAGLYYRYPVREMCPSPLFLQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHcCCEEEEECccccCCCCCCCCcCHHHHHHHHHCCCeEEEeeCCC
Confidence 467788999999988643332 112 23456677899999999965
No 206
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=41.59 E-value=23 Score=23.68 Aligned_cols=11 Identities=27% Similarity=0.380 Sum_probs=8.5
Q ss_pred HHHHhCCceEe
Q 017968 29 IELIHSGVTCF 39 (363)
Q Consensus 29 ~~~l~~GvTtv 39 (363)
..++++|||||
T Consensus 58 ~~~l~~GvTTV 68 (68)
T PF13594_consen 58 AAALAGGVTTV 68 (68)
T ss_dssp HHHHHTTEEEE
T ss_pred HHHHCcceeeC
Confidence 44479999997
No 207
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=41.02 E-value=2.7e+02 Score=24.95 Aligned_cols=170 Identities=12% Similarity=0.082 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEEeccCccccCC-HHH-HHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHH
Q 017968 86 CIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT-DRL-LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTF 163 (363)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~-l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~ 163 (363)
.++.+.+..++.+ ++ |-+.++.......+ .+. ..-+..+|+++++||.+|++.+..... +..
T Consensus 30 ~~~AileaA~e~~---sP-vIiq~S~g~~~y~gg~~~~~~~v~~~a~~~~vPV~lHlDHg~~~~~------------~~~ 93 (286)
T COG0191 30 TLQAILEAAEEEK---SP-VIIQFSEGAAKYAGGADSLAHMVKALAEKYGVPVALHLDHGASFED------------CKQ 93 (286)
T ss_pred HHHHHHHHHHHhC---CC-EEEEecccHHHHhchHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH------------HHH
Confidence 3444444444432 23 33344444433334 233 344557888999999999987653221 122
Q ss_pred HHHhCCCCCCeeEEEeecCChh--------HHHHHHhCCCeEEEChhhhccc-------------cCcccHHHHHHcC-C
Q 017968 164 LDKIEFLQNNLLSAHTVWVNHT--------EIGLLSRAGVKVSHCPASAMRM-------------LGFAPIKEMLHAD-I 221 (363)
Q Consensus 164 ~~~~~~~~~~~~~~H~~~~~~~--------~~~~~~~~g~~v~~~p~~~~~~-------------~~~~~~~~~l~~G-~ 221 (363)
..+.|+ ..+...+++.+-+ -++.+.+.|+.|+..-..-... .......+..+.+ +
T Consensus 94 ai~~GF---sSvMiDgS~~~~eENi~~tkevv~~ah~~gvsVEaElG~~GG~Edg~~~~~~~~~~tdp~ea~~fv~~tgi 170 (286)
T COG0191 94 AIRAGF---SSVMIDGSHLPFEENIAITKEVVEFAHAYGVSVEAELGTLGGEEDGVVLYTDPADLTDPEEALEFVERTGI 170 (286)
T ss_pred HHhcCC---ceEEecCCcCCHHHHHHHHHHHHHHHHHcCCcEEEEeccccCccCCcccccchhhhCCHHHHHHHHhccCc
Confidence 222232 2233344444432 2567778898888665332111 1112234444443 3
Q ss_pred ---eEEEecCCCCCCC---C--CcHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017968 222 ---CVSLGTDGAPSNN---R--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 281 (363)
Q Consensus 222 ---~~~lgTD~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~pA~~ 281 (363)
.+++||=|.++.. . ++.+.+++-.. . .++. +.-..++|.+++-+.+..+-+|+
T Consensus 171 D~LA~aiGn~HG~Yk~~~p~L~~~~L~~i~~~~---~--~PlV--lHGgSGip~~eI~~aI~~GV~Kv 231 (286)
T COG0191 171 DALAAAIGNVHGVYKPGNPKLDFDRLKEIQEAV---S--LPLV--LHGGSGIPDEEIREAIKLGVAKV 231 (286)
T ss_pred ceeeeeccccccCCCCCCCCCCHHHHHHHHHHh---C--CCEE--EeCCCCCCHHHHHHHHHhCceEE
Confidence 5778888876542 1 22233332221 1 1111 11134688888776666554443
No 208
>COG3589 Uncharacterized conserved protein [Function unknown]
Probab=40.64 E-value=2.9e+02 Score=25.33 Aligned_cols=91 Identities=11% Similarity=0.049 Sum_probs=56.9
Q ss_pred CCeEEEeccCccccC---CHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEe
Q 017968 103 GRIRIWFGIRQIMNA---TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 179 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~---~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 179 (363)
|+-.++.+.+..... -...+.+++..|+++|+.+.+-++-.- ....+.....++...+.|+-|-| +-|
T Consensus 29 Gf~~IFtsl~~~~~~~~~~~~~~~ell~~Anklg~~vivDvnPsi------l~~l~~S~~~l~~f~e~G~~glR--lD~- 99 (360)
T COG3589 29 GFKRIFTSLLIPEEDAELYFHRFKELLKEANKLGLRVIVDVNPSI------LKELNISLDNLSRFQELGVDGLR--LDY- 99 (360)
T ss_pred CccceeeecccCCchHHHHHHHHHHHHHHHHhcCcEEEEEcCHHH------HhhcCCChHHHHHHHHhhhhhee--ecc-
Confidence 444555555443222 234578899999999999999886321 22333333346667777776532 233
Q ss_pred ecCChhHHHHHHhCCCeEEEChhh
Q 017968 180 VWVNHTEIGLLSRAGVKVSHCPAS 203 (363)
Q Consensus 180 ~~~~~~~~~~~~~~g~~v~~~p~~ 203 (363)
.++-+++..+.+.+.+|..+++.
T Consensus 100 -gfS~eei~~ms~~~lkieLN~S~ 122 (360)
T COG3589 100 -GFSGEEIAEMSKNPLKIELNAST 122 (360)
T ss_pred -cCCHHHHHHHhcCCeEEEEchhh
Confidence 46677777887777888888754
No 209
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=40.42 E-value=2.5e+02 Score=24.52 Aligned_cols=113 Identities=9% Similarity=0.031 Sum_probs=55.6
Q ss_pred HHHHHHHhCCceEeecCC-----------cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCh---HHHHHHHH
Q 017968 26 LCGIELIHSGVTCFAEAG-----------GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT---DDCIQSQK 91 (363)
Q Consensus 26 ~~~~~~l~~GvTtv~d~~-----------~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 91 (363)
..+..+.+.|++.+--.. ....+.+.+..++.|+.......... +++........ ...++...
T Consensus 17 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~v~s~~~~~~---~~~~~~~~~~~~~r~~~~~~~~ 93 (275)
T PRK09856 17 HAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETN---GYPYNMMLGDEHMRRESLDMIK 93 (275)
T ss_pred HHHHHHHHcCCCEEEEccCCccccccccCchHHHHHHHHHHHcCCeEEEecCccc---CcCccccCCCHHHHHHHHHHHH
Confidence 345566788999876321 11246677888899998643221111 11111100011 11222333
Q ss_pred HHHHHhcCCCCCCeEEEeccCccccCC-------HHHHHHHHHHHHHcCCeeeEecc
Q 017968 92 ELYAKHHHAADGRIRIWFGIRQIMNAT-------DRLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 92 ~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
..++.....+...+.+..+........ .+.++++.++|++.|+.+.+|..
T Consensus 94 ~~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~ 150 (275)
T PRK09856 94 LAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPL 150 (275)
T ss_pred HHHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 333333333334443322211111111 23578889999999999998864
No 210
>PRK05588 histidinol-phosphatase; Provisional
Probab=39.78 E-value=62 Score=28.28 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=31.0
Q ss_pred HHHHHhCCCeEEEChhhhccccC----cccHHHHHHcCCe-EEEecCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRMLG----FAPIKEMLHADIC-VSLGTDGA 230 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~~~----~~~~~~~l~~G~~-~~lgTD~~ 230 (363)
++.+++.|+.++++..+..+... ...+..+.+.|++ +++|||.+
T Consensus 172 l~~~~~~g~~lEINt~~l~~~~~~~~~~~~l~~~~~~g~~~i~lgSDAH 220 (255)
T PRK05588 172 LKVLIEKEKVLEINTRRLDDKRSVENLVKIYKRFYELGGKYITLGSDAH 220 (255)
T ss_pred HHHHHHcCCEEEEECcccCCCCCCCCHHHHHHHHHHcCCcEEEEECCCC
Confidence 57788999999998744221111 2246777888987 79999965
No 211
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. Members of this protein family are 4-hydroxy-2-oxovalerate aldolase, also called 4-hydroxy-2-ketovalerate aldolase and 2-oxo-4-hydroxypentanoate aldolase. This enzyme, part of the pathway for the meta-cleavage of catechol, produces pyruvate and acetaldehyde. Acetaldehyde is then converted by acetaldehyde dehydrogenase (acylating) (DmpF; EC 1.2.1.10) to acetyl-CoA. The two enzymes are tightly associated.
Probab=38.49 E-value=2.6e+02 Score=25.69 Aligned_cols=26 Identities=12% Similarity=0.070 Sum_probs=11.0
Q ss_pred CHHHHHHHHHHHHHc-C--CeeeEeccCC
Q 017968 118 TDRLLLETRDMAREF-K--TGIHMHVAEI 143 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~-g--~~v~~H~~~~ 143 (363)
.++.+.++++..++. + +++.+|+.++
T Consensus 170 ~P~~v~~~v~~l~~~l~~~i~ig~H~Hnn 198 (333)
T TIGR03217 170 LPDDVRDRVRALKAVLKPETQVGFHAHHN 198 (333)
T ss_pred CHHHHHHHHHHHHHhCCCCceEEEEeCCC
Confidence 344444444444332 2 4444444433
No 212
>TIGR03586 PseI pseudaminic acid synthase.
Probab=38.14 E-value=3.2e+02 Score=25.05 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCC-----C---CChHHHHHHhCCCCCCeeEEEeecCChhH--
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV-----D---HGTVTFLDKIEFLQNNLLSAHTVWVNHTE-- 186 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-- 186 (363)
.+.+...++.+++++.|+++..-..+... .+...+ ++. . -.-...++..+-.+..++++-+. .+.+|
T Consensus 74 l~~e~~~~L~~~~~~~Gi~~~stpfd~~s-vd~l~~-~~v~~~KI~S~~~~n~~LL~~va~~gkPvilstG~-~t~~Ei~ 150 (327)
T TIGR03586 74 TPWEWHKELFERAKELGLTIFSSPFDETA-VDFLES-LDVPAYKIASFEITDLPLIRYVAKTGKPIIMSTGI-ATLEEIQ 150 (327)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEccCCHHH-HHHHHH-cCCCEEEECCccccCHHHHHHHHhcCCcEEEECCC-CCHHHHH
Confidence 35677888999999999998877655442 233322 211 0 01244666666667777777776 45555
Q ss_pred --HHHHHhCCC-eEE--EChhhhccc---cCcccHHHHHH-cCCeEEEecCCCCC
Q 017968 187 --IGLLSRAGV-KVS--HCPASAMRM---LGFAPIKEMLH-ADICVSLGTDGAPS 232 (363)
Q Consensus 187 --~~~~~~~g~-~v~--~~p~~~~~~---~~~~~~~~~l~-~G~~~~lgTD~~~~ 232 (363)
++.+.+.|. .++ +|.+..... .+...+..+.+ -++++++ |||..+
T Consensus 151 ~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~-SDHt~G 204 (327)
T TIGR03586 151 EAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGL-SDHTLG 204 (327)
T ss_pred HHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEe-eCCCCc
Confidence 345555554 244 364332111 22333333333 3788888 688754
No 213
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=37.73 E-value=2.5e+02 Score=23.72 Aligned_cols=91 Identities=13% Similarity=0.007 Sum_probs=58.3
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCC
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 195 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~ 195 (363)
..+.+...++.+.+.+.|+++.=-...+....+ .++.+++. -++..+.-+.-++.++.+.+.+.|.
T Consensus 16 ~~~~e~a~~~~~al~~~Gi~~iEit~~t~~a~~-----------~i~~l~~~---~~~~~vGAGTVl~~~~a~~a~~aGA 81 (204)
T TIGR01182 16 IDDVDDALPLAKALIEGGLRVLEVTLRTPVALD-----------AIRLLRKE---VPDALIGAGTVLNPEQLRQAVDAGA 81 (204)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHH-----------HHHHHHHH---CCCCEEEEEeCCCHHHHHHHHHcCC
Confidence 346777888888888888885322222221111 22233221 1245677777888999999999999
Q ss_pred eEEEChhhhccccCcccHHHHHHcCCeEEE
Q 017968 196 KVSHCPASAMRMLGFAPIKEMLHADICVSL 225 (363)
Q Consensus 196 ~v~~~p~~~~~~~~~~~~~~~l~~G~~~~l 225 (363)
...++|..+.. -+..+.+.|++..-
T Consensus 82 ~FivsP~~~~~-----v~~~~~~~~i~~iP 106 (204)
T TIGR01182 82 QFIVSPGLTPE-----LAKHAQDHGIPIIP 106 (204)
T ss_pred CEEECCCCCHH-----HHHHHHHcCCcEEC
Confidence 99999977543 35566777776654
No 214
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=36.46 E-value=2.7e+02 Score=23.69 Aligned_cols=170 Identities=10% Similarity=0.087 Sum_probs=83.8
Q ss_pred cccccCcCCCCchhHHHHHHHHHHHHHhCCceEeec-CCcCCH-HHHHHHHHHcC--CeEEEecccccCCCCCCcccccC
Q 017968 6 DRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE-AGGQHV-SEMAKAVELLG--LRACLVQSTMDCGEGLPASWAVR 81 (363)
Q Consensus 6 ~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d-~~~~~~-~~~~~~~~~~g--ir~~~~~~~~~~~~~~~~~~~~~ 81 (363)
....|+-+..++|+....+++. +.+|++.+.- +..... +.+.+..++.+ .....+.+++..
T Consensus 13 ~~vi~vir~~~~~~a~~~~~al----~~~Gi~~iEit~~~~~a~~~i~~l~~~~~~~p~~~vGaGTV~~----------- 77 (213)
T PRK06552 13 NGVVAVVRGESKEEALKISLAV----IKGGIKAIEVTYTNPFASEVIKELVELYKDDPEVLIGAGTVLD----------- 77 (213)
T ss_pred CCEEEEEECCCHHHHHHHHHHH----HHCCCCEEEEECCCccHHHHHHHHHHHcCCCCCeEEeeeeCCC-----------
Confidence 3455666666777766555554 8888888753 333333 33333344443 235555555431
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChH
Q 017968 82 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 161 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 161 (363)
. ++.+..++. +. .+.++|+. + .++++.|++.|+++.--+.. +.
T Consensus 78 -~----~~~~~a~~a----GA---~FivsP~~----~----~~v~~~~~~~~i~~iPG~~T-----------------~~ 120 (213)
T PRK06552 78 -A----VTARLAILA----GA---QFIVSPSF----N----RETAKICNLYQIPYLPGCMT-----------------VT 120 (213)
T ss_pred -H----HHHHHHHHc----CC---CEEECCCC----C----HHHHHHHHHcCCCEECCcCC-----------------HH
Confidence 1 222332322 11 22233322 2 45667888889887654432 22
Q ss_pred HHHHHhCCCCCCeeEEE-eecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcC-CeEEEecCCCC
Q 017968 162 TFLDKIEFLQNNLLSAH-TVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAP 231 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~~H-~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G-~~~~lgTD~~~ 231 (363)
+...... .|...+-.. ......+.++.++..--.+-++|+.... ...+.+.+++| ..+++||....
T Consensus 121 E~~~A~~-~Gad~vklFPa~~~G~~~ik~l~~~~p~ip~~atGGI~---~~N~~~~l~aGa~~vavgs~l~~ 188 (213)
T PRK06552 121 EIVTALE-AGSEIVKLFPGSTLGPSFIKAIKGPLPQVNVMVTGGVN---LDNVKDWFAAGADAVGIGGELNK 188 (213)
T ss_pred HHHHHHH-cCCCEEEECCcccCCHHHHHHHhhhCCCCEEEEECCCC---HHHHHHHHHCCCcEEEEchHHhC
Confidence 2222211 122222111 1123344455554432223444544332 36688999999 58888888754
No 215
>PRK08123 histidinol-phosphatase; Reviewed
Probab=36.19 E-value=57 Score=28.84 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=30.2
Q ss_pred HHHHHhCCCeEEEChhhhcc--ccCc----ccHHHHHHcCCeEEEecCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMR--MLGF----APIKEMLHADICVSLGTDGA 230 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~--~~~~----~~~~~~l~~G~~~~lgTD~~ 230 (363)
++.+++.|..++++.++--+ .... .-+..+.+.|+++++|||.+
T Consensus 203 l~~~~~~g~~lEINtsgl~~~~~~~~yP~~~il~~~~e~g~~itlgSDAH 252 (270)
T PRK08123 203 LALIKKRGYELDFNTAGLRKPYCGEPYPPGEIITLAKKLGIPLVYGSDAH 252 (270)
T ss_pred HHHHHHcCCEEEEEchhhcCCCCCCCCCcHHHHHHHHHcCCCEEEeCCCC
Confidence 57788899999998754321 1112 23455667899999999955
No 216
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=35.77 E-value=2.7e+02 Score=23.49 Aligned_cols=59 Identities=12% Similarity=-0.026 Sum_probs=33.3
Q ss_pred cccccCcCCCCchhHHHHHHHHHHHHHhCCceEeec-CCcCCHHHHHHHHHHcCCeEEEecccc
Q 017968 6 DRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE-AGGQHVSEMAKAVELLGLRACLVQSTM 68 (363)
Q Consensus 6 ~~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d-~~~~~~~~~~~~~~~~gir~~~~~~~~ 68 (363)
+...|+-+..++++....+++. +.+|++.+.- +........++...+..-....+.+++
T Consensus 4 ~~vv~Vir~~~~~~a~~ia~al----~~gGi~~iEit~~tp~a~~~I~~l~~~~~~~~vGAGTV 63 (201)
T PRK06015 4 QPVIPVLLIDDVEHAVPLARAL----AAGGLPAIEITLRTPAALDAIRAVAAEVEEAIVGAGTI 63 (201)
T ss_pred CCEEEEEEcCCHHHHHHHHHHH----HHCCCCEEEEeCCCccHHHHHHHHHHHCCCCEEeeEeC
Confidence 3455666667777766666555 8899997753 333444444444333333455555544
No 217
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=33.96 E-value=2.9e+02 Score=23.31 Aligned_cols=92 Identities=8% Similarity=0.006 Sum_probs=58.1
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCC
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 195 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~ 195 (363)
..+.+...++.+.+.+.|+++.=-.-.+....+ .++.+.+. . +...+.-+.-++.++.+...+.|.
T Consensus 12 ~~~~~~a~~ia~al~~gGi~~iEit~~tp~a~~-----------~I~~l~~~-~--~~~~vGAGTVl~~e~a~~ai~aGA 77 (201)
T PRK06015 12 IDDVEHAVPLARALAAGGLPAIEITLRTPAALD-----------AIRAVAAE-V--EEAIVGAGTILNAKQFEDAAKAGS 77 (201)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCccHHH-----------HHHHHHHH-C--CCCEEeeEeCcCHHHHHHHHHcCC
Confidence 346777888888888888875322222221111 22222221 1 245677777888999999999999
Q ss_pred eEEEChhhhccccCcccHHHHHHcCCeEEEe
Q 017968 196 KVSHCPASAMRMLGFAPIKEMLHADICVSLG 226 (363)
Q Consensus 196 ~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lg 226 (363)
...++|..+.. -+..+.+.|++..-|
T Consensus 78 ~FivSP~~~~~-----vi~~a~~~~i~~iPG 103 (201)
T PRK06015 78 RFIVSPGTTQE-----LLAAANDSDVPLLPG 103 (201)
T ss_pred CEEECCCCCHH-----HHHHHHHcCCCEeCC
Confidence 99999977543 255566777766543
No 218
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=33.82 E-value=3.4e+02 Score=24.07 Aligned_cols=25 Identities=12% Similarity=0.116 Sum_probs=10.5
Q ss_pred CHHHHHHHHHHHHHc--CCeeeEeccC
Q 017968 118 TDRLLLETRDMAREF--KTGIHMHVAE 142 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~--g~~v~~H~~~ 142 (363)
++..+.++++..++. ++++.+|+.+
T Consensus 176 ~P~~v~~lv~~l~~~~~~~~i~~H~Hn 202 (274)
T cd07938 176 TPAQVRRLLEAVLERFPDEKLALHFHD 202 (274)
T ss_pred CHHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 344444444444332 2444444443
No 219
>PRK07329 hypothetical protein; Provisional
Probab=33.82 E-value=65 Score=28.04 Aligned_cols=45 Identities=11% Similarity=-0.043 Sum_probs=30.7
Q ss_pred HHHHHhCCCeEEEChhhhcccc---C-cccHHHHHHcCC-eEEEecCCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRML---G-FAPIKEMLHADI-CVSLGTDGAP 231 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~~---~-~~~~~~~l~~G~-~~~lgTD~~~ 231 (363)
++.++++|+.++++..+..+.. . ...+..+.+.|+ ++++|||.+.
T Consensus 171 ~~~~~~~~~~lEiNt~~~~~~~~~~~~~~~l~~~~~~g~~~i~~gSDAH~ 220 (246)
T PRK07329 171 FAKMIDNDLAFELNTKSMYLYGNEGLYRYAIELYKQLGGKLFSIGSDAHK 220 (246)
T ss_pred HHHHHHcCCeEEEECcccccCCCCcchHHHHHHHHHcCCeEEEecCCCCC
Confidence 4678889999998876532211 1 224666678897 4999999764
No 220
>TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative. This family is conserved at better than 40 % identity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein.
Probab=33.38 E-value=3.4e+02 Score=23.88 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHcCCeeeEecc
Q 017968 120 RLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 120 ~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
+.++++.++|+++|+.+.+|..
T Consensus 133 ~~l~~l~~~A~~~Gv~l~lE~~ 154 (279)
T TIGR00542 133 EGLKEAVELAARAQVTLAVEIM 154 (279)
T ss_pred HHHHHHHHHHHHcCCEEEEeeC
Confidence 4577888999999999999864
No 221
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=32.43 E-value=4e+02 Score=24.46 Aligned_cols=112 Identities=14% Similarity=0.207 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCC--------CCChHHHHHHhCCCCCCeeEEEeecCChhH--
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV--------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-- 186 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-- 186 (363)
.+.+.+++++++|++.|+.+..-..+... .+...+ ++. .-.-...++...-.+..++++-+. .+.+|
T Consensus 73 l~~e~~~~L~~~~~~~Gi~~~stpfd~~s-vd~l~~-~~v~~~KIaS~~~~n~pLL~~~A~~gkPvilStGm-atl~Ei~ 149 (329)
T TIGR03569 73 LSEEDHRELKEYCESKGIEFLSTPFDLES-ADFLED-LGVPRFKIPSGEITNAPLLKKIARFGKPVILSTGM-ATLEEIE 149 (329)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEeCCHHH-HHHHHh-cCCCEEEECcccccCHHHHHHHHhcCCcEEEECCC-CCHHHHH
Confidence 46788999999999999998877654432 233322 111 111234556655566677777666 45555
Q ss_pred --HHHHHhCCCe-----EEEChhhhccc---cCcccHHHHHH-cCCeEEEecCCCCC
Q 017968 187 --IGLLSRAGVK-----VSHCPASAMRM---LGFAPIKEMLH-ADICVSLGTDGAPS 232 (363)
Q Consensus 187 --~~~~~~~g~~-----v~~~p~~~~~~---~~~~~~~~~l~-~G~~~~lgTD~~~~ 232 (363)
++.+++.|.. +-+|.+..... .+...+..+.+ -+++++. |||...
T Consensus 150 ~Av~~i~~~G~~~~~i~llhC~s~YP~~~~~~nL~~I~~Lk~~f~~pVG~-SdHt~G 205 (329)
T TIGR03569 150 AAVGVLRDAGTPDSNITLLHCTTEYPAPFEDVNLNAMDTLKEAFDLPVGY-SDHTLG 205 (329)
T ss_pred HHHHHHHHcCCCcCcEEEEEECCCCCCCcccCCHHHHHHHHHHhCCCEEE-CCCCcc
Confidence 4455555543 44465432111 22333333333 3688887 798754
No 222
>PRK08185 hypothetical protein; Provisional
Probab=32.24 E-value=3.7e+02 Score=24.05 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=44.5
Q ss_pred EeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhH-
Q 017968 108 WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE- 186 (363)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~- 186 (363)
.+++........+...-+..+|++..+|+.+|++.+.... .+...-+.|+ ..+...+++++.++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~a~~~~vPV~lHLDHg~~~e------------~i~~ai~~Gf---~SVM~D~S~l~~eeN 107 (283)
T PRK08185 43 AIHPNELDFLGDNFFAYVRERAKRSPVPFVIHLDHGATIE------------DVMRAIRCGF---TSVMIDGSLLPYEEN 107 (283)
T ss_pred EeCcchhhhccHHHHHHHHHHHHHCCCCEEEECCCCCCHH------------HHHHHHHcCC---CEEEEeCCCCCHHHH
Confidence 3444333233445555566788899999999998765321 2222223333 34556667777654
Q ss_pred -------HHHHHhCCCeEEECh
Q 017968 187 -------IGLLSRAGVKVSHCP 201 (363)
Q Consensus 187 -------~~~~~~~g~~v~~~p 201 (363)
.+.+...|+.++...
T Consensus 108 i~~t~~vv~~a~~~gv~vE~El 129 (283)
T PRK08185 108 VALTKEVVELAHKVGVSVEGEL 129 (283)
T ss_pred HHHHHHHHHHHHHcCCeEEEEE
Confidence 234456677776443
No 223
>PLN02727 NAD kinase
Probab=32.21 E-value=4.2e+02 Score=28.16 Aligned_cols=38 Identities=8% Similarity=0.073 Sum_probs=22.5
Q ss_pred HHHHHhCCceEeecCCcCC------HHHHHHHHHHcCCeEEEec
Q 017968 28 GIELIHSGVTCFAEAGGQH------VSEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 28 ~~~~l~~GvTtv~d~~~~~------~~~~~~~~~~~gir~~~~~ 65 (363)
+.++++.|+.||++..+.. ..+..++++..|+..+..+
T Consensus 274 la~LA~~GfKTIINLRpd~E~~q~~~~ee~eAae~~GL~yVhIP 317 (986)
T PLN02727 274 LKWLLEKGFKTIVDLRAEIVKDNFYQAAVDDAISSGKIEVVKIP 317 (986)
T ss_pred HHHHHHCCCeEEEECCCCCcCCCchhHHHHHHHHHcCCeEEEee
Confidence 3444667888888764322 2245566777777765543
No 224
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=32.20 E-value=3.8e+02 Score=24.93 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=30.0
Q ss_pred HHHHHHHHhcCCCCCCeEEEeccCccccC---CHHHHHHHHHHHHHcCCeeeEeccCC
Q 017968 89 SQKELYAKHHHAADGRIRIWFGIRQIMNA---TDRLLLETRDMAREFKTGIHMHVAEI 143 (363)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~l~~~~~~a~~~g~~v~~H~~~~ 143 (363)
+..+.++..+. .|.-.++.+.+.+... -.+.+.++.++|+++|+.+++-++..
T Consensus 15 ~~~~yi~~a~~--~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 15 ENKAYIEKAAK--YGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp HHHHHHHHHHC--TTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred HHHHHHHHHHH--CCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 33444444443 3455666666654432 24678889999999999999888654
No 225
>PRK15108 biotin synthase; Provisional
Probab=31.89 E-value=3.3e+02 Score=25.08 Aligned_cols=26 Identities=8% Similarity=-0.001 Sum_probs=17.3
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecc
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
....+.+.++++.+++.++.+.++.+
T Consensus 107 ~~~~e~i~~~i~~ik~~~i~v~~s~G 132 (345)
T PRK15108 107 ERDMPYLEQMVQGVKAMGLETCMTLG 132 (345)
T ss_pred cchHHHHHHHHHHHHhCCCEEEEeCC
Confidence 34457778888888877766655443
No 226
>PRK13669 hypothetical protein; Provisional
Probab=31.43 E-value=96 Score=21.65 Aligned_cols=30 Identities=17% Similarity=0.072 Sum_probs=23.0
Q ss_pred CCccEEEEccEEEEECCeecccCHHHHHHHHHHHhc
Q 017968 326 ENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLLM 361 (363)
Q Consensus 326 ~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~~ 361 (363)
..=.+.+|||++|... +++++...+.+.+.
T Consensus 44 ~~~~FAlVng~~V~a~------t~eeL~~kI~~~i~ 73 (78)
T PRK13669 44 SEGLFALVNGEVVEGE------TPEELVENIYAHLE 73 (78)
T ss_pred ccCceEEECCeEeecC------CHHHHHHHHHHHHh
Confidence 4556789999999866 88888888776553
No 227
>COG2100 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=31.05 E-value=1.7e+02 Score=26.66 Aligned_cols=47 Identities=15% Similarity=0.094 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcC
Q 017968 84 DDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 133 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g 133 (363)
+..++.+.++.+.+.+ ..+.+.++|--.+..+++++.+++++|++.|
T Consensus 238 dYdv~kvle~aE~i~~---a~idvlIaPv~lPG~ND~E~~~iIe~A~~iG 284 (414)
T COG2100 238 DYDVKKVLEVAEYIAN---AGIDVLIAPVWLPGVNDDEMPKIIEWAREIG 284 (414)
T ss_pred ccCHHHHHHHHHHHHh---CCCCEEEeeeecCCcChHHHHHHHHHHHHhC
Confidence 3445555666665554 3467778888888899999999999999877
No 228
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=31.05 E-value=4.2e+02 Score=24.25 Aligned_cols=146 Identities=9% Similarity=0.027 Sum_probs=0.0
Q ss_pred HHHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcC
Q 017968 28 GIELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH 99 (363)
Q Consensus 28 ~~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (363)
+.++++.|+|+|+ |.+....+ ++.+.++..|+-.=--.+.+-... .............++..+++++-.
T Consensus 101 i~~ai~~GftSVMiD~S~lp~eeNI~~T~evv~~Ah~~GvsVEaElG~igg~e--d~~~~~~~~~T~peeA~~Fv~~Tg- 177 (321)
T PRK07084 101 CKDCIDSGFSSVMIDGSHLPYEENVALTKKVVEYAHQFDVTVEGELGVLAGVE--DEVSAEHHTYTQPEEVEDFVKKTG- 177 (321)
T ss_pred HHHHHHcCCCEEEeeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEEeeecCcc--CCccCcccccCCHHHHHHHHHHhC-
Q ss_pred CCCCCeEEEeccCcccc-------CCHHHHHHHHHHHHHc-CCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCC
Q 017968 100 AADGRIRIWFGIRQIMN-------ATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 171 (363)
Q Consensus 100 ~~~~~v~~~~~~~~~~~-------~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (363)
-+.+.+.++...-.. .+.=.++.+.+..+.. ++|+.+|=+.+. +.++++...-.|
T Consensus 178 --vD~LAvaiGt~HG~Y~~~~~~~~p~Ld~d~L~~I~~~~~~vPLVLHGgSg~---------------~~~~~~~~~~~g 240 (321)
T PRK07084 178 --VDSLAISIGTSHGAYKFKPGQCPPPLRFDILEEIEKRIPGFPIVLHGSSSV---------------PQEYVKTINEYG 240 (321)
T ss_pred --CCEEeeccccccccccCCCCCCCCccCHHHHHHHHHhcCCCCEEEeCCCCC---------------cHHHHHHHHHhc
Q ss_pred CCeeEEEeecCChhHHHHHHhCCC
Q 017968 172 NNLLSAHTVWVNHTEIGLLSRAGV 195 (363)
Q Consensus 172 ~~~~~~H~~~~~~~~~~~~~~~g~ 195 (363)
-.+.....+++++++.+.+.|+
T Consensus 241 --~~~~~~~Gi~~e~~~kai~~GI 262 (321)
T PRK07084 241 --GKLKDAIGIPEEQLRKAAKSAV 262 (321)
T ss_pred --CccccCCCCCHHHHHHHHHcCC
No 229
>PRK11858 aksA trans-homoaconitate synthase; Reviewed
Probab=30.81 E-value=4.5e+02 Score=24.58 Aligned_cols=19 Identities=21% Similarity=0.167 Sum_probs=8.5
Q ss_pred CCHHHHHHHHHHHHHcCCe
Q 017968 117 ATDRLLLETRDMAREFKTG 135 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~ 135 (363)
.+++.+.++++.+.+.|..
T Consensus 142 ~~~~~l~~~~~~~~~~Ga~ 160 (378)
T PRK11858 142 TDLDFLIEFAKAAEEAGAD 160 (378)
T ss_pred CCHHHHHHHHHHHHhCCCC
Confidence 3444444444444444433
No 230
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=30.21 E-value=3.7e+02 Score=23.46 Aligned_cols=155 Identities=16% Similarity=0.137 Sum_probs=87.7
Q ss_pred hCCceEeecCCcCCH----HHHHHHHHHcCCeEEE--ecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCCCCeE
Q 017968 33 HSGVTCFAEAGGQHV----SEMAKAVELLGLRACL--VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 106 (363)
Q Consensus 33 ~~GvTtv~d~~~~~~----~~~~~~~~~~gir~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 106 (363)
..|++.++|....-. ....+++++.|+..+- .+...... .+.|.. .....+..+.......+.|
T Consensus 64 ~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eRp~~~~~~---~~~~~~------v~~~~eA~~~l~~~~~~~i- 133 (249)
T PF02571_consen 64 ENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFERPSWQPEP---DDNWHY------VDSYEEAAELLKELGGGRI- 133 (249)
T ss_pred hCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEcCCcccCC---CCeEEE------eCCHHHHHHHHhhcCCCCE-
Confidence 469999999753222 3556788888877532 12211100 011111 1122222333322222333
Q ss_pred EEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhH
Q 017968 107 IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 186 (363)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 186 (363)
+++..+ ..+..+.. +...+.++.+.+-.... . ..|+...+.+...+.+..+.+
T Consensus 134 -flttGs------k~L~~f~~-~~~~~~r~~~RvLp~~~--------------~-----~~g~~~~~iia~~GPfs~e~n 186 (249)
T PF02571_consen 134 -FLTTGS------KNLPPFVP-APLPGERLFARVLPTPE--------------S-----ALGFPPKNIIAMQGPFSKELN 186 (249)
T ss_pred -EEeCch------hhHHHHhh-cccCCCEEEEEECCCcc--------------c-----cCCCChhhEEEEeCCCCHHHH
Confidence 333222 44555544 55667777777653321 1 556656667777887777778
Q ss_pred HHHHHhCCCeEEEChhhhccccCcccHHHHHHcCCeEEE
Q 017968 187 IGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSL 225 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~l 225 (363)
..++++.++.+.+|=.|... ...+-+..+.+.|+++.+
T Consensus 187 ~al~~~~~i~~lVtK~SG~~-g~~eKi~AA~~lgi~viv 224 (249)
T PF02571_consen 187 RALFRQYGIDVLVTKESGGS-GFDEKIEAARELGIPVIV 224 (249)
T ss_pred HHHHHHcCCCEEEEcCCCch-hhHHHHHHHHHcCCeEEE
Confidence 89999999999988766544 334556778889997665
No 231
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=30.00 E-value=1.3e+02 Score=31.14 Aligned_cols=108 Identities=8% Similarity=0.107 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHH----HHHHhCC-------CCCCeeEEEeec---CChhH
Q 017968 121 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT----FLDKIEF-------LQNNLLSAHTVW---VNHTE 186 (363)
Q Consensus 121 ~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~~~H~~~---~~~~~ 186 (363)
....++..++..|+.+.+-..+........+..-|......+ .+++.+. .+......|+.- +++++
T Consensus 594 ~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~q 673 (1019)
T KOG0203|consen 594 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQ 673 (1019)
T ss_pred cCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHH
Confidence 344667889999999888777765544444433332111111 1222211 123456677765 55678
Q ss_pred HHHHHhCCCeEEEChhhhccccCcccHHHHHHcCCeEEEecCCC
Q 017968 187 IGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGA 230 (363)
Q Consensus 187 ~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgTD~~ 230 (363)
++.+.+..--+++.-++... -..-+...-+.|.++++.=|+.
T Consensus 674 ld~il~nh~eIVFARTSPqQ--KLiIVe~cQr~GaiVaVTGDGV 715 (1019)
T KOG0203|consen 674 LDELLQNHQEIVFARTSPQQ--KLIIVEGCQRQGAIVAVTGDGV 715 (1019)
T ss_pred HHHHHHhCCceEEEecCccc--eEEeEhhhhhcCcEEEEeCCCc
Confidence 88887777656544333221 1223455567788999888875
No 232
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length and are found in both eukaryotes and bacteria.; GO: 0005507 copper ion binding, 0055070 copper ion homeostasis; PDB: 2BDQ_A 3IWP_I 1X8C_B 1X7I_A 1TWD_B.
Probab=29.76 E-value=3.4e+02 Score=22.87 Aligned_cols=24 Identities=21% Similarity=0.196 Sum_probs=18.6
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecc
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
..+.+.++++++.|+ ++++..|..
T Consensus 99 ~iD~~~~~~Li~~a~--~~~~tFHRA 122 (201)
T PF03932_consen 99 EIDEEALEELIEAAG--GMPVTFHRA 122 (201)
T ss_dssp SB-HHHHHHHHHHHT--TSEEEE-GG
T ss_pred CcCHHHHHHHHHhcC--CCeEEEeCc
Confidence 577888999999887 899999974
No 233
>PF07293 DUF1450: Protein of unknown function (DUF1450); InterPro: IPR009910 This entry consists of several hypothetical bacterial proteins of around 80 residues in length representing two families. Members contain four highly conserved cysteine residues and their function is unknown.
Probab=29.34 E-value=1.1e+02 Score=21.44 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=22.6
Q ss_pred CCccEEEEccEEEEECCeecccCHHHHHHHHHHHh
Q 017968 326 ENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 360 (363)
Q Consensus 326 ~~v~~v~~~G~~v~~~~~~~~~d~~~~~~~~~~~~ 360 (363)
..-.+.+|||++|..+ +.+++...+.+-+
T Consensus 44 ~~~pFAlVnG~~V~A~------t~eeL~~kI~~~i 72 (78)
T PF07293_consen 44 AKKPFALVNGEIVAAE------TAEELLEKIKEKI 72 (78)
T ss_pred CCCccEEECCEEEecC------CHHHHHHHHHHHH
Confidence 3556789999999876 8888888776654
No 234
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=29.27 E-value=4.6e+02 Score=27.52 Aligned_cols=49 Identities=8% Similarity=0.148 Sum_probs=34.9
Q ss_pred cCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCC
Q 017968 111 IRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 172 (363)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (363)
.-++...+..+.+..++.+++.|++|++-.++.... ..+..+++|+.+.
T Consensus 578 lVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~T-------------A~AI~r~iGi~~~ 626 (972)
T KOG0202|consen 578 LVGILDPPRPEVADAIELCRQAGIRVIMITGDNKET-------------AEAIAREIGIFSE 626 (972)
T ss_pred EeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHH-------------HHHHHHHhCCCcC
Confidence 334444556778899999999999999999887653 4455566666543
No 235
>KOG1096 consensus Adenosine monophosphate deaminase [Nucleotide transport and metabolism]
Probab=28.71 E-value=1.2e+02 Score=30.43 Aligned_cols=75 Identities=19% Similarity=0.295 Sum_probs=49.6
Q ss_pred EEEeecCChhH-HHH-HHhCCCeEEEChhhhccc---cCcccHHHHHHcCCeEEEecCCCCCCC--CCcHHHHHHHHHHH
Q 017968 176 SAHTVWVNHTE-IGL-LSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNN--RMSIVDEMYLASLI 248 (363)
Q Consensus 176 ~~H~~~~~~~~-~~~-~~~~g~~v~~~p~~~~~~---~~~~~~~~~l~~G~~~~lgTD~~~~~~--~~~~~~~~~~~~~~ 248 (363)
+.|+..+...- ++. +.=..+.+.+.|-+|-.+ -...|+.++++.|..++++||.+...+ .-.+.++...++.+
T Consensus 612 Ishg~Llrk~PvLQYLyYL~QIpIamSPLSnnslfl~Y~kNPf~~~f~~GL~VSLSTddpLqf~yTkEPLiEEYSIAAqi 691 (768)
T KOG1096|consen 612 ISHGILLRKVPVLQYLYYLAQIPIAMSPLSNNSLFLSYHKNPFPEYFKRGLNVSLSTDDPLQFHYTKEPLIEEYSIAAQV 691 (768)
T ss_pred ccchhhhccchHHHHHHHHHhcchhhccccccccccccccCchHHHHHhhceeeeccCCchhhhcccchHHHHHHHHHHH
Confidence 57777655432 332 223467888888887544 456799999999999999999875421 22355666666655
Q ss_pred hc
Q 017968 249 NK 250 (363)
Q Consensus 249 ~~ 250 (363)
.+
T Consensus 692 yk 693 (768)
T KOG1096|consen 692 YK 693 (768)
T ss_pred Hh
Confidence 54
No 236
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=28.71 E-value=3.7e+02 Score=22.87 Aligned_cols=95 Identities=12% Similarity=0.023 Sum_probs=59.1
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCC-CCeeEEEeecCChhHHHHHHhCC
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEIGLLSRAG 194 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~~~~~~~~~~~~g 194 (363)
..+.+....+.+...+.|+++.=-.-.+....+ .++.+++. ..+ +..++.=+.-++.++.+...+.|
T Consensus 21 ~~~~~~a~~~~~al~~~Gi~~iEit~~~~~a~~-----------~i~~l~~~-~~~~p~~~vGaGTV~~~~~~~~a~~aG 88 (213)
T PRK06552 21 GESKEEALKISLAVIKGGIKAIEVTYTNPFASE-----------VIKELVEL-YKDDPEVLIGAGTVLDAVTARLAILAG 88 (213)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCCccHHH-----------HHHHHHHH-cCCCCCeEEeeeeCCCHHHHHHHHHcC
Confidence 346778888888888889885422222221111 22233221 111 24667777788899999999999
Q ss_pred CeEEEChhhhccccCcccHHHHHHcCCeEEEec
Q 017968 195 VKVSHCPASAMRMLGFAPIKEMLHADICVSLGT 227 (363)
Q Consensus 195 ~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgT 227 (363)
....++|..+... +..+.+.|++..-|+
T Consensus 89 A~FivsP~~~~~v-----~~~~~~~~i~~iPG~ 116 (213)
T PRK06552 89 AQFIVSPSFNRET-----AKICNLYQIPYLPGC 116 (213)
T ss_pred CCEEECCCCCHHH-----HHHHHHcCCCEECCc
Confidence 9999999776432 444556666655444
No 237
>PRK10490 sensor protein KdpD; Provisional
Probab=28.65 E-value=3.8e+02 Score=28.53 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=60.3
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeec
Q 017968 102 DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 181 (363)
Q Consensus 102 ~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 181 (363)
.|..|+++|...--..+...+.++.+. ++.|..|.+-..|+-.-.+ ..+.++.+..+-.+.+--++..
T Consensus 22 ~g~l~i~~g~~~gvgkt~~ml~~a~~~-~~~g~dvv~g~~e~h~r~~-----------t~~~~~~l~~~p~~~~~~~~~~ 89 (895)
T PRK10490 22 RGKLKIFFGACAGVGKTYAMLQEAQRL-RAQGLDVLVGVVETHGRKE-----------TAALLEGLTVLPPKRIHHRGRH 89 (895)
T ss_pred CCcEEEEeecCCCCCHHHHHHHHHHHH-HhCCCcEEEEEeeCCCCHH-----------HHHHhcCCCcCCCeeEeECCee
Confidence 578899887655445566666666554 5568887765544321111 2222333333333333334445
Q ss_pred CChhHHHHHHhCCCeEEEC---hhhhc---cc-cCcccHHHHHHcCCeEEE
Q 017968 182 VNHTEIGLLSRAGVKVSHC---PASAM---RM-LGFAPIKEMLHADICVSL 225 (363)
Q Consensus 182 ~~~~~~~~~~~~g~~v~~~---p~~~~---~~-~~~~~~~~~l~~G~~~~l 225 (363)
+.+-+++.+.++.-.++.. .++|. +. +.+..+.+++++|+.+.-
T Consensus 90 ~~e~d~~~~l~~~p~~~lvdelah~n~~g~~~~kr~qdv~~ll~~gi~v~t 140 (895)
T PRK10490 90 ISEFDLDAALARRPALILMDELAHSNAPGSRHPKRWQDVEELLEAGIDVFT 140 (895)
T ss_pred ccccCHHHHHhCCCCEEEEeccccCCCCCCCCCccHhhHHHHHHCCCeEEe
Confidence 5555666666655333322 22232 22 567788888888886543
No 238
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain. Desulfobacterium autotrophicum LeuA3 is sequence-similar to alpha-isopropylmalate synthase (LeuA) but its exact function is unknown. Members of this family have an N-terminal TIM barrel domain that belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of in
Probab=28.41 E-value=4.2e+02 Score=23.43 Aligned_cols=29 Identities=14% Similarity=0.149 Sum_probs=17.9
Q ss_pred cCCHHHHHHHHHHHHH-cC-CeeeEeccCCh
Q 017968 116 NATDRLLLETRDMARE-FK-TGIHMHVAEIP 144 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~-~g-~~v~~H~~~~~ 144 (363)
..+++.+.++++..++ .+ +++.+|+.++.
T Consensus 176 ~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~ 206 (273)
T cd07941 176 GTLPHEIAEIVKEVRERLPGVPLGIHAHNDS 206 (273)
T ss_pred CCCHHHHHHHHHHHHHhCCCCeeEEEecCCC
Confidence 4566777777766654 34 56667766544
No 239
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=27.55 E-value=1.7e+02 Score=24.62 Aligned_cols=50 Identities=20% Similarity=0.322 Sum_probs=24.0
Q ss_pred ccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCCc---CCHHHHHHHHHHcCCeEEE
Q 017968 9 WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACL 63 (363)
Q Consensus 9 ~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gir~~~ 63 (363)
||....-.-|++...+.++ ++.|++- ...+. ++.+++.+.+.+.|+..++
T Consensus 155 fPm~Gl~~leE~~avAkA~----a~~g~~l-EPTGGIdl~N~~~I~~i~l~aGv~~vi 207 (218)
T PF07071_consen 155 FPMGGLKHLEELKAVAKAC----ARNGFTL-EPTGGIDLDNFEEIVKICLDAGVEKVI 207 (218)
T ss_dssp ---TTTTTHHHHHHHHHHH----HHCT-EE-EEBSS--TTTHHHHHHHHHHTT-S-B-
T ss_pred eecCCcccHHHHHHHHHHH----HHcCcee-CCcCCcCHHHHHHHHHHHHHcCCCeec
Confidence 4555555555555555555 6666665 33322 4556666666666665543
No 240
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=27.14 E-value=1.6e+02 Score=28.15 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHcCCeeeE-eccC
Q 017968 119 DRLLLETRDMAREFKTGIHM-HVAE 142 (363)
Q Consensus 119 ~~~l~~~~~~a~~~g~~v~~-H~~~ 142 (363)
.+.+.+++++|++.|+++|+ |++.
T Consensus 215 ~~~~~~~~~la~~~g~~vhi~Hiss 239 (443)
T TIGR03178 215 VEAIRRTLALAKVTGCRVHVVHLSS 239 (443)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 35578888999999999966 7764
No 241
>PRK12344 putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional
Probab=26.89 E-value=6.2e+02 Score=24.96 Aligned_cols=31 Identities=10% Similarity=-0.066 Sum_probs=21.8
Q ss_pred ccCCHHHHHHHHHHHHH-cCCeeeEeccCChh
Q 017968 115 MNATDRLLLETRDMARE-FKTGIHMHVAEIPY 145 (363)
Q Consensus 115 ~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~ 145 (363)
....|..+.++++..++ .++++.+|+.++..
T Consensus 182 G~~~P~~v~~li~~l~~~~~v~i~~H~HND~G 213 (524)
T PRK12344 182 GGTLPHEVAEIVAEVRAAPGVPLGIHAHNDSG 213 (524)
T ss_pred CCcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 34567777777776655 48899999887653
No 242
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=26.76 E-value=4.5e+02 Score=23.22 Aligned_cols=20 Identities=10% Similarity=0.396 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHcCCeEEEec
Q 017968 46 HVSEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 46 ~~~~~~~~~~~~gir~~~~~ 65 (363)
..+.+.+.+.+.|+..+..+
T Consensus 107 G~e~F~~~~~~aGvdgviip 126 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIP 126 (263)
T ss_pred CHHHHHHHHHHcCCeEEEec
Confidence 45677888888888876633
No 243
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=25.76 E-value=5.3e+02 Score=23.75 Aligned_cols=117 Identities=13% Similarity=0.107 Sum_probs=64.4
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhh------cCCCCChHHHHHHhCCCCCCeeEEEeecCChhHH-
Q 017968 115 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT------RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI- 187 (363)
Q Consensus 115 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~- 187 (363)
.....+.++.+.+++++.|+++.+-..+... .+...+. ......-...++..+-.+..+++.-+...+.+|+
T Consensus 139 ~G~g~~gL~~L~~~~~~~Gl~v~tev~d~~~-~~~l~~~vd~lqIgAr~~~N~~LL~~va~~~kPViLk~G~~~ti~E~l 217 (335)
T PRK08673 139 QGLGEEGLKLLAEAREETGLPIVTEVMDPRD-VELVAEYVDILQIGARNMQNFDLLKEVGKTNKPVLLKRGMSATIEEWL 217 (335)
T ss_pred ccccHHHHHHHHHHHHHcCCcEEEeeCCHHH-HHHHHHhCCeEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHH
Confidence 3345778888999999999999887655432 2222221 1111123446666676677777777777666653
Q ss_pred ---HHHHhCCC-eEEEChh--hhc----cc-cCcccHHHHHH-cCCeEEEecCCCCC
Q 017968 188 ---GLLSRAGV-KVSHCPA--SAM----RM-LGFAPIKEMLH-ADICVSLGTDGAPS 232 (363)
Q Consensus 188 ---~~~~~~g~-~v~~~p~--~~~----~~-~~~~~~~~~l~-~G~~~~lgTD~~~~ 232 (363)
+.+...|- .+..|-. +.+ +. -+...+..+.+ .+.+++.-+||..+
T Consensus 218 ~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G 274 (335)
T PRK08673 218 MAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATG 274 (335)
T ss_pred HHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCc
Confidence 33443332 3333331 011 11 23344444444 36777777777644
No 244
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=25.10 E-value=3.3e+02 Score=21.07 Aligned_cols=27 Identities=7% Similarity=-0.172 Sum_probs=16.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeccCCh
Q 017968 118 TDRLLLETRDMAREFKTGIHMHVAEIP 144 (363)
Q Consensus 118 ~~~~l~~~~~~a~~~g~~v~~H~~~~~ 144 (363)
+++....+.+..+....|+.+||..+.
T Consensus 71 ~~~~v~~f~~~~~~~~~pvL~HC~sG~ 97 (135)
T TIGR01244 71 TPDDVETFRAAIGAAEGPVLAYCRSGT 97 (135)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCh
Confidence 344444555555556788999996554
No 245
>PRK08044 allantoinase; Provisional
Probab=24.38 E-value=1.3e+02 Score=28.94 Aligned_cols=24 Identities=21% Similarity=0.112 Sum_probs=20.0
Q ss_pred CchhHHHHHHHHHHHHHhCCceEeecCC
Q 017968 16 TEEDSYISTLLCGIELIHSGVTCFAEAG 43 (363)
Q Consensus 16 ~~ed~~~~~~~~~~~~l~~GvTtv~d~~ 43 (363)
..|++...++++ +++||||++||+
T Consensus 69 ~~e~~~~~~~aa----~~gGvTtv~d~~ 92 (449)
T PRK08044 69 HWEGYETGTRAA----AKGGITTMIEMP 92 (449)
T ss_pred ccccHHHHHHHH----HhCCceEEECCc
Confidence 367777777777 999999999996
No 246
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=24.34 E-value=5e+02 Score=22.99 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=21.1
Q ss_pred HhCCceE-eecCCc------CCHHHHHHHHHHcCCeEEEec
Q 017968 32 IHSGVTC-FAEAGG------QHVSEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 32 l~~GvTt-v~d~~~------~~~~~~~~~~~~~gir~~~~~ 65 (363)
-+.|+++ ++-|.+ ...+.+.+.+.+.|+.+++.+
T Consensus 89 r~~~~~~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivp 129 (265)
T COG0159 89 RAKGVKVPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVP 129 (265)
T ss_pred HhcCCCCCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeC
Confidence 4455663 444443 334677888889998876633
No 247
>PLN02389 biotin synthase
Probab=24.31 E-value=6e+02 Score=23.85 Aligned_cols=24 Identities=21% Similarity=0.030 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEec
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHV 140 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~ 140 (363)
.+.+.-.+.++.|++.|+.+..|.
T Consensus 210 ~s~e~rl~ti~~a~~~Gi~v~sg~ 233 (379)
T PLN02389 210 RSYDDRLETLEAVREAGISVCSGG 233 (379)
T ss_pred CCHHHHHHHHHHHHHcCCeEeEEE
Confidence 356666678889999999886664
No 248
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=24.26 E-value=3.7e+02 Score=21.42 Aligned_cols=27 Identities=4% Similarity=-0.042 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHcCCeeeEeccCChh
Q 017968 119 DRLLLETRDMAREFKTGIHMHVAEIPY 145 (363)
Q Consensus 119 ~~~l~~~~~~a~~~g~~v~~H~~~~~~ 145 (363)
.+.+.++++...+..-|+.+||..++.
T Consensus 110 ~~~~~~~~~~l~~~~~p~l~HC~aGKD 136 (164)
T PF13350_consen 110 AEAYRKIFELLADAPGPVLFHCTAGKD 136 (164)
T ss_dssp HHHHHHHHHHHH-TT--EEEE-SSSSS
T ss_pred hHHHHHHHHHhccCCCcEEEECCCCCc
Confidence 677888888776655699999987664
No 249
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=24.02 E-value=5.3e+02 Score=23.11 Aligned_cols=121 Identities=7% Similarity=0.016 Sum_probs=0.0
Q ss_pred HHHHHhCCceEee-cCCcCCHH-------HHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcC
Q 017968 28 GIELIHSGVTCFA-EAGGQHVS-------EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH 99 (363)
Q Consensus 28 ~~~~l~~GvTtv~-d~~~~~~~-------~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (363)
+.+++..|+|+|+ |-+...++ ++.+.++..|+..=--.+.+-...+-.............++..+++++-.
T Consensus 90 i~~ai~~GftSVM~DgS~lp~eeNi~~T~~vv~~Ah~~gvsVEaElG~vgg~e~~~~~~~~~~~~T~pe~a~~Fv~~Tg- 168 (284)
T PRK12857 90 VMKCIRNGFTSVMIDGSKLPLEENIALTKKVVEIAHAVGVSVEAELGKIGGTEDDITVDEREAAMTDPEEARRFVEETG- 168 (284)
T ss_pred HHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeeecCCccCCCCcccchhhcCCHHHHHHHHHHHC-
Q ss_pred CCCCCeEEEeccCc--cccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHH
Q 017968 100 AADGRIRIWFGIRQ--IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 151 (363)
Q Consensus 100 ~~~~~v~~~~~~~~--~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~ 151 (363)
-+.+.+.++... ....+.=.++.+-+..+..++|+.+|=+.+..+.+...
T Consensus 169 --vD~LAvaiGt~HG~y~~~p~Ld~~~L~~i~~~~~vPLVlHGgSG~~~e~~~~ 220 (284)
T PRK12857 169 --VDALAIAIGTAHGPYKGEPKLDFDRLAKIKELVNIPIVLHGSSGVPDEAIRK 220 (284)
T ss_pred --CCEEeeccCccccccCCCCcCCHHHHHHHHHHhCCCEEEeCCCCCCHHHHHH
No 250
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=24.02 E-value=4.2e+02 Score=23.03 Aligned_cols=103 Identities=10% Similarity=-0.031 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhCCceEeecCCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCChHHHHHHHHHHHHHhcCCCC
Q 017968 23 STLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 102 (363)
Q Consensus 23 ~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
.+...+...++-|..|..-+....+++.++.+++.++..+.+.-.+... ..-..+.+.++..+..+-
T Consensus 19 e~~g~yID~lKfg~Gt~~l~~~~~l~eki~la~~~~V~v~~GGtl~E~~-------------~~q~~~~~Yl~~~k~lGf 85 (237)
T TIGR03849 19 KVCGDYITFVKFGWGTSALIDRDIVKEKIEMYKDYGIKVYPGGTLFEIA-------------HSKGKFDEYLNECDELGF 85 (237)
T ss_pred HHhhhheeeEEecCceEeeccHHHHHHHHHHHHHcCCeEeCCccHHHHH-------------HHhhhHHHHHHHHHHcCC
Confidence 4455566778888777777765567888999999999987763233210 000122222333332222
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEecc
Q 017968 103 GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 141 (363)
Q Consensus 103 ~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 141 (363)
+.|- ++... ...+.+...++++.+++.|..+..-++
T Consensus 86 ~~IE--iS~G~-~~i~~~~~~rlI~~~~~~g~~v~~EvG 121 (237)
T TIGR03849 86 EAVE--ISDGS-MEISLEERCNLIERAKDNGFMVLSEVG 121 (237)
T ss_pred CEEE--EcCCc-cCCCHHHHHHHHHHHHhCCCeEecccc
Confidence 2333 22222 345778888899999999988775543
No 251
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=23.61 E-value=5.1e+02 Score=22.78 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.5
Q ss_pred CCHHHHHHHHHHcCCeEEEec
Q 017968 45 QHVSEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 45 ~~~~~~~~~~~~~gir~~~~~ 65 (363)
...+.+.+.+.+.|+.+++.+
T Consensus 104 ~G~e~f~~~~~~aGvdGviip 124 (258)
T PRK13111 104 YGVERFAADAAEAGVDGLIIP 124 (258)
T ss_pred cCHHHHHHHHHHcCCcEEEEC
Confidence 356788999999999887754
No 252
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=23.56 E-value=5.6e+02 Score=23.29 Aligned_cols=107 Identities=11% Similarity=0.048 Sum_probs=58.5
Q ss_pred hCCceEee--cCCcCCHHHHHHHHHHcCCeEEEecccc---------cCCCCCCcc---cccCChHHHHHHHHHHHHHhc
Q 017968 33 HSGVTCFA--EAGGQHVSEMAKAVELLGLRACLVQSTM---------DCGEGLPAS---WAVRTTDDCIQSQKELYAKHH 98 (363)
Q Consensus 33 ~~GvTtv~--d~~~~~~~~~~~~~~~~gir~~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 98 (363)
.-|+.+.. -.+...-+.+.+..++.|+...+...-- +...+--.. -++.-.+...+...+.+++..
T Consensus 48 ~lG~~~~a~GflGg~tg~~~~~~l~~~gi~~~fv~v~g~TRinvki~~~~~~~~Tein~~Gp~is~~~~~~~l~~~~~~l 127 (310)
T COG1105 48 DLGIPVTALGFLGGFTGEFFVALLKDEGIPDAFVEVKGDTRINVKILDEEDGEETEINFPGPEISEAELEQFLEQLKALL 127 (310)
T ss_pred HcCCCceEEEecCCccHHHHHHHHHhcCCCceEEEccCCCeeeEEEEecCCCcEEEecCCCCCCCHHHHHHHHHHHHHhc
Confidence 34555433 2344556677777788887764432211 110000000 001122334444444444422
Q ss_pred CCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccC
Q 017968 99 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 142 (363)
Q Consensus 99 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 142 (363)
. +.-+ +.++.+-++..+.+.+.++++.+++.|..+.+-+++
T Consensus 128 ~--~~d~-VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 128 E--SDDI-VVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred c--cCCE-EEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 2 2222 345556677889999999999999999999988864
No 253
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=23.26 E-value=4.7e+02 Score=22.26 Aligned_cols=50 Identities=16% Similarity=0.061 Sum_probs=38.6
Q ss_pred CeeEEEeecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCCeEEEec
Q 017968 173 NLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGT 227 (363)
Q Consensus 173 ~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgT 227 (363)
+.++.-+.-+++++.+.+.+.|....++|..+... ++.+.+.|++.+=|.
T Consensus 64 ~~lIGAGTVL~~~q~~~a~~aGa~fiVsP~~~~ev-----~~~a~~~~ip~~PG~ 113 (211)
T COG0800 64 EALIGAGTVLNPEQARQAIAAGAQFIVSPGLNPEV-----AKAANRYGIPYIPGV 113 (211)
T ss_pred ccEEccccccCHHHHHHHHHcCCCEEECCCCCHHH-----HHHHHhCCCcccCCC
Confidence 45677778899999999999999999999776443 566677777666443
No 254
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=22.95 E-value=4.8e+02 Score=22.22 Aligned_cols=170 Identities=14% Similarity=0.089 Sum_probs=85.1
Q ss_pred ccccCcCCCCchhHHHHHHHHHHHHHhCCceEeec-CCcCCHHHH-HHHHHHcCCeEEEecccccCCCCCCcccccCChH
Q 017968 7 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE-AGGQHVSEM-AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTD 84 (363)
Q Consensus 7 ~~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d-~~~~~~~~~-~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~ 84 (363)
...|.-...++|+-...+.+. +.+|++++.- +.+....+. ...+++.+ +...+.+++-. .
T Consensus 14 ~vI~Vlr~~~~e~a~~~a~Al----i~gGi~~IEITl~sp~a~e~I~~l~~~~p-~~lIGAGTVL~------------~- 75 (211)
T COG0800 14 PVVPVIRGDDVEEALPLAKAL----IEGGIPAIEITLRTPAALEAIRALAKEFP-EALIGAGTVLN------------P- 75 (211)
T ss_pred CeeEEEEeCCHHHHHHHHHHH----HHcCCCeEEEecCCCCHHHHHHHHHHhCc-ccEEccccccC------------H-
Confidence 344555666777755555544 9999999864 333444444 44455555 77777776631 1
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEeccCccccCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHH
Q 017968 85 DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 164 (363)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
++..+.++. +. ++.++|+. + .++++.|.++++++.--+.... .+...
T Consensus 76 ---~q~~~a~~a----Ga---~fiVsP~~----~----~ev~~~a~~~~ip~~PG~~Tpt---------------Ei~~A 122 (211)
T COG0800 76 ---EQARQAIAA----GA---QFIVSPGL----N----PEVAKAANRYGIPYIPGVATPT---------------EIMAA 122 (211)
T ss_pred ---HHHHHHHHc----CC---CEEECCCC----C----HHHHHHHHhCCCcccCCCCCHH---------------HHHHH
Confidence 233333322 11 22233332 3 4577889999999875554211 11122
Q ss_pred HHhCCCCCCeeEEEeecCChhHHHHHHhCCCeEEEChhhhccccCcccHHHHHHcCC-eEEEecCCCC
Q 017968 165 DKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAP 231 (363)
Q Consensus 165 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~l~~G~-~~~lgTD~~~ 231 (363)
.+.|.-.-.. +.-...-...-+..++.-=..+.+||+..... ..+.+.+..|+ .+.+||.-.+
T Consensus 123 le~G~~~lK~-FPa~~~Gg~~~~ka~~gP~~~v~~~pTGGVs~---~N~~~yla~gv~avG~Gs~l~~ 186 (211)
T COG0800 123 LELGASALKF-FPAEVVGGPAMLKALAGPFPQVRFCPTGGVSL---DNAADYLAAGVVAVGLGSWLVP 186 (211)
T ss_pred HHcChhheee-cCccccCcHHHHHHHcCCCCCCeEeecCCCCH---HHHHHHHhCCceEEecCccccC
Confidence 2223211011 00001112222333332224477788775543 46888999994 3333455443
No 255
>TIGR02660 nifV_homocitr homocitrate synthase NifV. This family consists of the NifV clade of homocitrate synthases, most of which are found in operons for nitrogen fixation. Members are closely homologous to enzymes that include 2-isopropylmalate synthase, (R)-citramalate synthase, and homocitrate synthases associated with other processes. The homocitrate made by this enzyme becomes a part of the iron-molybdenum cofactor of nitrogenase.
Probab=21.36 E-value=6.6e+02 Score=23.30 Aligned_cols=28 Identities=21% Similarity=0.205 Sum_probs=15.3
Q ss_pred eccCccccCCHHHHHHHHHHHHHcCCee
Q 017968 109 FGIRQIMNATDRLLLETRDMAREFKTGI 136 (363)
Q Consensus 109 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v 136 (363)
++.......+++.+.++++.+.+.|...
T Consensus 131 ~~~ed~~r~~~~~l~~~~~~~~~~Ga~~ 158 (365)
T TIGR02660 131 VGGEDASRADPDFLVELAEVAAEAGADR 158 (365)
T ss_pred EeecCCCCCCHHHHHHHHHHHHHcCcCE
Confidence 4443334455666666666666666543
No 256
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=21.03 E-value=3.1e+02 Score=23.01 Aligned_cols=92 Identities=14% Similarity=0.026 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCCCe
Q 017968 117 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 196 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~ 196 (363)
.+.+...++.+...+.|+++.=-...+....+ .++.+.+. . ++.++.-+.-++.++.+...+.|..
T Consensus 17 ~~~~~a~~~~~al~~gGi~~iEiT~~t~~a~~-----------~I~~l~~~-~--p~~~vGAGTV~~~e~a~~a~~aGA~ 82 (196)
T PF01081_consen 17 DDPEDAVPIAEALIEGGIRAIEITLRTPNALE-----------AIEALRKE-F--PDLLVGAGTVLTAEQAEAAIAAGAQ 82 (196)
T ss_dssp SSGGGHHHHHHHHHHTT--EEEEETTSTTHHH-----------HHHHHHHH-H--TTSEEEEES--SHHHHHHHHHHT-S
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCccHHH-----------HHHHHHHH-C--CCCeeEEEeccCHHHHHHHHHcCCC
Confidence 34566677778888888875322222222111 22222221 1 3456677777888999999999999
Q ss_pred EEEChhhhccccCcccHHHHHHcCCeEEEec
Q 017968 197 VSHCPASAMRMLGFAPIKEMLHADICVSLGT 227 (363)
Q Consensus 197 v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgT 227 (363)
..++|..+.. -+..+.+.|++..=|.
T Consensus 83 FivSP~~~~~-----v~~~~~~~~i~~iPG~ 108 (196)
T PF01081_consen 83 FIVSPGFDPE-----VIEYAREYGIPYIPGV 108 (196)
T ss_dssp EEEESS--HH-----HHHHHHHHTSEEEEEE
T ss_pred EEECCCCCHH-----HHHHHHHcCCcccCCc
Confidence 9999976543 2566677777766554
No 257
>PF02007 MtrH: Tetrahydromethanopterin S-methyltransferase MtrH subunit; InterPro: IPR023467 In archaea the enzyme tetrahydromethanopterin S-methyltransferase is composed of eight subunits, MtrA-H. The enzyme is a membrane- associated enzyme complex which catalyzes an energy-conserving, sodium-ion-translocating step in methanogenesis from hydrogen and carbon dioxide []. Subunit MtrH catalyzes the methylation reaction and was shown to exhibit methyltetrahydromethanopterin:cob(I)alamin methyltransferase activity []. CH3-H4MPT + cob(I)alamin --> H4MPT + CH3-cob(III)alamin (H4MPT = tetrahydromethanopterin); GO: 0008168 methyltransferase activity, 0006730 one-carbon metabolic process
Probab=20.92 E-value=3.9e+02 Score=24.00 Aligned_cols=74 Identities=8% Similarity=0.151 Sum_probs=48.0
Q ss_pred cCCHHHHHHHHHHHHH-cCCeeeEeccCChhhHHHHHhhcCCCCChHHHHHHhCCCCCCeeEEEeecCChhHHHHHHhCC
Q 017968 116 NATDRLLLETRDMARE-FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 194 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g 194 (363)
..+++.+.+.+++..+ .+.|+.+--.+...-.. ......+.|+.+.-..-+=.....++|++.+++.+
T Consensus 73 ~~s~EA~~kYidFv~~i~d~PfliDS~~~~~R~~-----------a~~yv~E~Gl~dR~IYNSIn~~~~~~EieaLkes~ 141 (296)
T PF02007_consen 73 AESPEAMEKYIDFVAEITDSPFLIDSSSPEVRIA-----------AAKYVTEIGLADRAIYNSINMSIEDEEIEALKESD 141 (296)
T ss_pred cCCHHHHHHHHHHHhhcCCCCeEecCCCHHHHHH-----------HHHHHhhhchhhhhhhhcCCCCCCHHHHHHHHhcC
Confidence 3577888888888877 67887776654332111 44566677776644433334456678899999998
Q ss_pred CeEEEC
Q 017968 195 VKVSHC 200 (363)
Q Consensus 195 ~~v~~~ 200 (363)
+.-.+.
T Consensus 142 i~aaIv 147 (296)
T PF02007_consen 142 IDAAIV 147 (296)
T ss_pred CCEEEE
Confidence 655543
No 258
>PLN02591 tryptophan synthase
Probab=20.70 E-value=5.8e+02 Score=22.34 Aligned_cols=20 Identities=10% Similarity=0.298 Sum_probs=14.3
Q ss_pred CHHHHHHHHHHcCCeEEEec
Q 017968 46 HVSEMAKAVELLGLRACLVQ 65 (363)
Q Consensus 46 ~~~~~~~~~~~~gir~~~~~ 65 (363)
..+.+.+.+.+.|+.+++.+
T Consensus 94 G~~~F~~~~~~aGv~Gviip 113 (250)
T PLN02591 94 GIDKFMATIKEAGVHGLVVP 113 (250)
T ss_pred HHHHHHHHHHHcCCCEEEeC
Confidence 35677888888888776644
No 259
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=20.52 E-value=5.5e+02 Score=22.02 Aligned_cols=96 Identities=9% Similarity=-0.006 Sum_probs=60.5
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEeccCChhhHHHHHhhcCCCCChHHHHH-HhCCCCCCeeEEEeecCChhHHHHHHhCC
Q 017968 116 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLD-KIEFLQNNLLSAHTVWVNHTEIGLLSRAG 194 (363)
Q Consensus 116 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~g 194 (363)
..+.+...++.+...+.|+++.=-.-.+....+ .++.+. +.+-..++.++.=+.-++.++.+...+.|
T Consensus 23 ~~~~~~a~~~~~al~~gGi~~iEiT~~tp~a~~-----------~i~~l~~~~~~~~p~~~vGaGTVl~~e~a~~a~~aG 91 (222)
T PRK07114 23 HADVEVAKKVIKACYDGGARVFEFTNRGDFAHE-----------VFAELVKYAAKELPGMILGVGSIVDAATAALYIQLG 91 (222)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCCcHHH-----------HHHHHHHHHHhhCCCeEEeeEeCcCHHHHHHHHHcC
Confidence 356788888889899999885322222211111 122221 11222234667778888999999999999
Q ss_pred CeEEEChhhhccccCcccHHHHHHcCCeEEEec
Q 017968 195 VKVSHCPASAMRMLGFAPIKEMLHADICVSLGT 227 (363)
Q Consensus 195 ~~v~~~p~~~~~~~~~~~~~~~l~~G~~~~lgT 227 (363)
....++|..+... +..+.+.|++..-|.
T Consensus 92 A~FiVsP~~~~~v-----~~~~~~~~i~~iPG~ 119 (222)
T PRK07114 92 ANFIVTPLFNPDI-----AKVCNRRKVPYSPGC 119 (222)
T ss_pred CCEEECCCCCHHH-----HHHHHHcCCCEeCCC
Confidence 9999999775432 566677777666443
No 260
>KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism]
Probab=20.32 E-value=6.7e+02 Score=22.93 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=55.2
Q ss_pred cccCcCCCCchhHHHHHHHHHHHHHhCCceEeecCC----------cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 017968 8 IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----------GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 77 (363)
Q Consensus 8 ~~~~~~~~~~ed~~~~~~~~~~~~l~~GvTtv~d~~----------~~~~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~ 77 (363)
.|+|..-+|+| ++.++.+.|+|-++.++ +.++..+.+..++.+...-+...++|.+ |..
T Consensus 134 gfRY~~PlTEe--------a~~qikkd~v~r~VafsqYPQyS~sTsGSSln~l~r~~r~~~~~~~~~wsiIdrW---~t~ 202 (395)
T KOG1321|consen 134 GFRYAHPLTEE--------ALEQIKKDGVTRAVAFSQYPQYSCSTSGSSLNELWRQFREDGYERDIKWSIIDRW---PTR 202 (395)
T ss_pred eeeecCcccHH--------HHHHHHhcCceeEEeeccCCceeeecCcccHHHHHHHHHhcCcccCCceEeeccc---ccc
Confidence 34555556655 47889999999987652 3567888888899988877777777654 221
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCCeEEEeccCcc
Q 017968 78 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI 114 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 114 (363)
.+. .....+.+++..+.+..-..+-|-++++.|+.
T Consensus 203 ~gl--IkafA~~I~keL~~F~~~~r~~VVIlFSAHsl 237 (395)
T KOG1321|consen 203 EGL--IKAFAENIEKELQTFPEPVRDDVVILFSAHSL 237 (395)
T ss_pred chH--HHHHHHHHHHHHHhcCCcccccEEEEEecCCC
Confidence 111 11112223333333332222456777777764
No 261
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=20.23 E-value=5.7e+02 Score=22.06 Aligned_cols=22 Identities=14% Similarity=0.043 Sum_probs=14.0
Q ss_pred CCHHHHHHHHHHHHHcCCeeeE
Q 017968 117 ATDRLLLETRDMAREFKTGIHM 138 (363)
Q Consensus 117 ~~~~~l~~~~~~a~~~g~~v~~ 138 (363)
.+++.+.++++.+.+.|.....
T Consensus 143 ~~~~~l~~~~~~~~~~g~~~i~ 164 (265)
T cd03174 143 TDPEYVLEVAKALEEAGADEIS 164 (265)
T ss_pred CCHHHHHHHHHHHHHcCCCEEE
Confidence 5666677777777777654433
Done!