Query 017971
Match_columns 363
No_of_seqs 172 out of 2894
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 07:51:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us3_A Calsequestrin-1; calciu 100.0 8.5E-45 2.9E-49 337.7 31.4 312 39-361 9-348 (367)
2 1sji_A Calsequestrin 2, calseq 100.0 8.2E-44 2.8E-48 329.6 31.0 312 39-361 7-346 (350)
3 2r2j_A Thioredoxin domain-cont 100.0 4E-43 1.4E-47 328.5 25.2 310 42-361 4-329 (382)
4 3f8u_A Protein disulfide-isome 100.0 2.2E-41 7.4E-46 326.6 28.7 308 43-361 1-334 (481)
5 2b5e_A Protein disulfide-isome 100.0 5.7E-40 1.9E-44 318.4 25.4 304 39-361 10-340 (504)
6 3apo_A DNAJ homolog subfamily 100.0 6E-34 2E-38 289.9 30.3 311 37-361 110-542 (780)
7 3apo_A DNAJ homolog subfamily 100.0 1.9E-31 6.3E-36 271.5 31.0 309 43-361 440-767 (780)
8 3ed3_A Protein disulfide-isome 100.0 7.1E-31 2.4E-35 236.6 21.1 215 40-261 14-278 (298)
9 3idv_A Protein disulfide-isome 100.0 2.4E-28 8.3E-33 213.9 21.4 210 39-254 11-239 (241)
10 3q6o_A Sulfhydryl oxidase 1; p 99.9 4.7E-25 1.6E-29 193.4 19.9 211 36-249 5-237 (244)
11 3h79_A Thioredoxin-like protei 99.9 9.5E-23 3.2E-27 160.2 14.5 111 38-148 10-126 (127)
12 3t58_A Sulfhydryl oxidase 1; o 99.9 2.2E-22 7.6E-27 193.4 19.2 210 37-249 6-237 (519)
13 3ec3_A Protein disulfide-isome 99.9 9.9E-22 3.4E-26 172.7 19.4 206 148-361 3-228 (250)
14 2h8l_A Protein disulfide-isome 99.9 7E-22 2.4E-26 173.9 16.6 207 147-361 2-230 (252)
15 2dj1_A Protein disulfide-isome 99.9 6.8E-22 2.3E-26 157.9 14.9 120 37-156 11-130 (140)
16 4f9z_D Endoplasmic reticulum r 99.9 7.8E-22 2.7E-26 170.9 15.7 203 151-361 9-225 (227)
17 3zzx_A Thioredoxin; oxidoreduc 99.9 2.3E-21 7.9E-26 146.6 13.4 99 45-148 2-104 (105)
18 3uem_A Protein disulfide-isome 99.9 1.2E-19 4.1E-24 168.2 27.8 296 42-358 16-354 (361)
19 1mek_A Protein disulfide isome 99.9 9.2E-22 3.1E-26 152.5 10.0 115 39-153 3-120 (120)
20 3gnj_A Thioredoxin domain prot 99.9 1.5E-20 5E-25 143.7 14.2 106 42-150 3-110 (111)
21 3uvt_A Thioredoxin domain-cont 99.8 1.5E-20 5.1E-25 143.7 13.5 106 42-148 4-110 (111)
22 1x5e_A Thioredoxin domain cont 99.8 1.9E-20 6.5E-25 146.7 14.2 113 41-157 5-117 (126)
23 2ywm_A Glutaredoxin-like prote 99.8 2.3E-20 7.9E-25 161.8 16.0 191 51-250 9-218 (229)
24 2voc_A Thioredoxin; electron t 99.8 3E-20 1E-24 142.5 14.2 105 44-152 2-107 (112)
25 3tco_A Thioredoxin (TRXA-1); d 99.8 4.2E-20 1.4E-24 140.6 14.1 105 42-149 3-108 (109)
26 2ppt_A Thioredoxin-2; thiredox 99.8 9.8E-20 3.4E-24 147.9 16.0 111 38-151 42-153 (155)
27 1x5d_A Protein disulfide-isome 99.8 8.2E-20 2.8E-24 144.3 14.7 110 41-150 5-117 (133)
28 3apq_A DNAJ homolog subfamily 99.8 2.7E-20 9.2E-25 159.2 12.7 119 37-158 91-210 (210)
29 3die_A Thioredoxin, TRX; elect 99.8 7.6E-20 2.6E-24 138.4 13.9 102 43-148 3-105 (106)
30 2trx_A Thioredoxin; electron t 99.8 1.2E-19 4.2E-24 137.9 15.0 104 43-149 2-107 (108)
31 1a8l_A Protein disulfide oxido 99.8 4.3E-20 1.5E-24 159.7 14.1 192 51-250 10-224 (226)
32 2dml_A Protein disulfide-isome 99.8 4.6E-20 1.6E-24 145.3 12.9 113 34-149 8-123 (130)
33 2yzu_A Thioredoxin; redox prot 99.8 9.7E-20 3.3E-24 138.5 13.7 106 43-151 1-107 (109)
34 3ga4_A Dolichyl-diphosphooligo 99.8 9.6E-20 3.3E-24 149.3 14.5 114 42-155 17-158 (178)
35 1nsw_A Thioredoxin, TRX; therm 99.8 8.4E-20 2.9E-24 138.1 13.2 102 45-149 2-104 (105)
36 3p2a_A Thioredoxin 2, putative 99.8 1.3E-19 4.4E-24 146.1 15.1 112 37-151 32-144 (148)
37 2qsi_A Putative hydrogenase ex 99.8 5.6E-20 1.9E-24 143.4 11.9 105 42-149 14-122 (137)
38 2l5l_A Thioredoxin; structural 99.8 1.4E-19 4.8E-24 143.8 14.5 108 41-151 7-127 (136)
39 2i4a_A Thioredoxin; acidophIle 99.8 2.3E-19 8E-24 136.0 15.0 103 43-148 2-106 (107)
40 3hxs_A Thioredoxin, TRXP; elec 99.8 8.9E-20 3.1E-24 145.7 13.1 109 39-150 18-139 (141)
41 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.1E-19 3.7E-24 145.2 13.4 106 42-150 5-112 (140)
42 2av4_A Thioredoxin-like protei 99.8 1.5E-19 5.1E-24 143.1 13.2 102 45-149 23-138 (160)
43 3qfa_C Thioredoxin; protein-pr 99.8 9.3E-20 3.2E-24 140.6 11.4 103 42-149 11-116 (116)
44 2o8v_B Thioredoxin 1; disulfid 99.8 2.4E-19 8.4E-24 140.8 13.9 104 43-149 22-127 (128)
45 2e0q_A Thioredoxin; electron t 99.8 2.7E-19 9.4E-24 134.7 13.3 102 45-150 1-103 (104)
46 3idv_A Protein disulfide-isome 99.8 1.9E-19 6.5E-24 157.1 14.3 112 42-153 129-240 (241)
47 2qgv_A Hydrogenase-1 operon pr 99.8 6E-20 2E-24 143.8 9.5 108 44-154 18-129 (140)
48 1w4v_A Thioredoxin, mitochondr 99.8 3.8E-19 1.3E-23 137.8 14.0 106 41-149 11-118 (119)
49 1thx_A Thioredoxin, thioredoxi 99.8 5.5E-19 1.9E-23 135.7 14.7 106 42-150 6-113 (115)
50 1t00_A Thioredoxin, TRX; redox 99.8 4.5E-19 1.5E-23 135.7 13.8 105 43-150 5-111 (112)
51 1r26_A Thioredoxin; redox-acti 99.8 4.9E-19 1.7E-23 138.4 14.0 105 41-150 17-123 (125)
52 1dby_A Chloroplast thioredoxin 99.8 4.6E-19 1.6E-23 134.4 13.1 103 44-149 2-106 (107)
53 3uem_A Protein disulfide-isome 99.8 4.6E-19 1.6E-23 164.3 15.9 207 147-361 13-230 (361)
54 4euy_A Uncharacterized protein 99.8 9.7E-20 3.3E-24 137.9 9.1 97 49-149 7-104 (105)
55 1fb6_A Thioredoxin M; electron 99.8 8.1E-19 2.8E-23 132.5 13.5 101 45-148 2-104 (105)
56 1gh2_A Thioredoxin-like protei 99.8 1.1E-18 3.8E-23 132.4 14.2 101 45-150 3-107 (107)
57 3f3q_A Thioredoxin-1; His TAG, 99.8 1E-18 3.5E-23 133.2 14.0 101 43-148 7-108 (109)
58 2c0g_A ERP29 homolog, windbeut 99.8 7.8E-19 2.7E-23 152.3 14.7 122 40-166 13-148 (248)
59 1ep7_A Thioredoxin CH1, H-type 99.8 1.1E-18 3.8E-23 133.5 13.9 104 43-150 2-111 (112)
60 2djj_A PDI, protein disulfide- 99.8 2.3E-19 8E-24 139.3 10.2 108 41-151 5-118 (121)
61 2pu9_C TRX-F, thioredoxin F-ty 99.8 9.2E-19 3.1E-23 133.8 13.3 104 41-149 3-110 (111)
62 2i1u_A Thioredoxin, TRX, MPT46 99.8 7.4E-19 2.5E-23 136.4 12.9 107 41-150 10-118 (121)
63 1xwb_A Thioredoxin; dimerizati 99.8 2.1E-18 7E-23 130.5 14.6 100 45-148 2-105 (106)
64 1syr_A Thioredoxin; SGPP, stru 99.8 1.4E-18 4.9E-23 133.0 13.8 103 42-149 8-111 (112)
65 2dj3_A Protein disulfide-isome 99.8 2.6E-19 9E-24 141.5 9.2 112 41-153 5-121 (133)
66 3dxb_A Thioredoxin N-terminall 99.8 1.7E-18 5.8E-23 149.3 15.1 113 37-152 6-120 (222)
67 3aps_A DNAJ homolog subfamily 99.8 4.2E-19 1.4E-23 138.1 10.2 107 42-151 2-114 (122)
68 3d6i_A Monothiol glutaredoxin- 99.8 2E-18 6.7E-23 132.2 13.7 103 44-149 1-108 (112)
69 2xc2_A Thioredoxinn; oxidoredu 99.8 2.3E-18 7.8E-23 132.9 13.8 100 44-149 14-117 (117)
70 3qou_A Protein YBBN; thioredox 99.8 1.5E-18 5.2E-23 155.6 14.4 106 42-150 6-114 (287)
71 3m9j_A Thioredoxin; oxidoreduc 99.8 2.4E-18 8.2E-23 129.9 13.2 99 46-149 3-105 (105)
72 2vlu_A Thioredoxin, thioredoxi 99.8 3.2E-18 1.1E-22 133.1 14.2 104 42-150 12-120 (122)
73 1oaz_A Thioredoxin 1; immune s 99.8 5.3E-19 1.8E-23 137.8 9.4 104 43-149 3-122 (123)
74 1v98_A Thioredoxin; oxidoreduc 99.8 2.6E-18 8.9E-23 137.1 13.5 105 43-150 33-138 (140)
75 1faa_A Thioredoxin F; electron 99.8 3.9E-18 1.3E-22 133.0 14.2 103 42-149 17-123 (124)
76 1xfl_A Thioredoxin H1; AT3G510 99.8 5.7E-18 2E-22 132.2 14.5 104 41-149 14-123 (124)
77 2vim_A Thioredoxin, TRX; thior 99.8 5.2E-18 1.8E-22 127.8 13.6 99 45-148 1-103 (104)
78 2wz9_A Glutaredoxin-3; protein 99.8 4.6E-18 1.6E-22 137.8 13.4 105 42-151 11-119 (153)
79 3ul3_B Thioredoxin, thioredoxi 99.8 1.5E-18 5.2E-23 136.2 10.0 99 47-148 29-128 (128)
80 3emx_A Thioredoxin; structural 99.8 1.8E-18 6.3E-23 137.1 10.5 106 41-153 14-129 (135)
81 2qc7_A ERP31, ERP28, endoplasm 99.8 7.6E-18 2.6E-22 145.7 15.2 102 43-149 5-118 (240)
82 2l6c_A Thioredoxin; oxidoreduc 99.8 1.8E-18 6.2E-23 132.0 9.5 102 45-151 5-107 (110)
83 3gix_A Thioredoxin-like protei 99.8 5.3E-18 1.8E-22 136.7 12.7 99 48-149 9-120 (149)
84 2es7_A Q8ZP25_salty, putative 99.8 7.6E-19 2.6E-23 140.1 7.6 111 44-158 18-133 (142)
85 3f8u_A Protein disulfide-isome 99.8 2.9E-16 1E-20 151.0 26.7 296 43-360 110-460 (481)
86 2oe3_A Thioredoxin-3; electron 99.8 6.8E-18 2.3E-22 129.7 12.2 100 43-147 12-113 (114)
87 2vm1_A Thioredoxin, thioredoxi 99.8 1.7E-17 5.7E-22 128.0 13.9 105 42-151 5-115 (118)
88 2j23_A Thioredoxin; immune pro 99.8 7E-18 2.4E-22 131.0 11.8 106 41-149 13-120 (121)
89 2dj0_A Thioredoxin-related tra 99.8 3.4E-19 1.2E-23 141.7 4.3 105 42-148 6-119 (137)
90 1zma_A Bacterocin transport ac 99.8 2.5E-18 8.7E-23 132.9 9.1 102 42-146 11-117 (118)
91 3evi_A Phosducin-like protein 99.7 2E-17 6.8E-22 127.3 13.1 99 43-148 3-112 (118)
92 1ti3_A Thioredoxin H, PTTRXH1; 99.7 1.4E-17 4.7E-22 127.5 12.1 103 42-149 3-111 (113)
93 3d22_A TRXH4, thioredoxin H-ty 99.7 2.3E-17 8E-22 131.3 13.1 106 41-151 22-133 (139)
94 1qgv_A Spliceosomal protein U5 99.7 2.8E-17 9.4E-22 131.4 13.2 97 49-148 10-119 (142)
95 2l57_A Uncharacterized protein 99.7 9.3E-18 3.2E-22 131.3 9.6 105 45-152 6-119 (126)
96 2f51_A Thioredoxin; electron t 99.7 6.6E-17 2.3E-21 124.9 12.7 105 43-152 3-115 (118)
97 3cxg_A Putative thioredoxin; m 99.7 2.8E-17 9.4E-22 129.9 10.6 106 39-150 16-129 (133)
98 2hls_A Protein disulfide oxido 99.7 1E-16 3.5E-21 139.9 14.6 193 51-253 15-227 (243)
99 2dbc_A PDCL2, unnamed protein 99.7 1.3E-16 4.4E-21 126.3 12.4 101 42-149 9-120 (135)
100 1a8l_A Protein disulfide oxido 99.7 1.5E-16 5.2E-21 137.3 12.8 105 45-149 118-225 (226)
101 2yj7_A LPBCA thioredoxin; oxid 99.5 2E-18 6.9E-23 130.3 0.0 102 44-148 2-105 (106)
102 3qcp_A QSOX from trypanosoma b 99.7 7.5E-18 2.6E-22 158.0 3.4 111 39-150 19-139 (470)
103 2kuc_A Putative disulphide-iso 99.7 1.4E-16 4.7E-21 125.2 9.5 105 45-152 8-123 (130)
104 4f9z_D Endoplasmic reticulum r 99.7 2E-15 6.7E-20 130.5 17.2 193 44-250 10-223 (227)
105 2trc_P Phosducin, MEKA, PP33; 99.7 1.6E-16 5.3E-21 135.9 9.4 102 42-148 98-211 (217)
106 2b5e_A Protein disulfide-isome 99.7 3.5E-16 1.2E-20 151.3 12.9 111 41-153 356-470 (504)
107 2fwh_A Thiol:disulfide interch 99.6 6E-16 2.1E-20 122.3 9.7 99 48-150 17-128 (134)
108 2djk_A PDI, protein disulfide- 99.6 7.8E-16 2.7E-20 121.5 10.3 104 45-152 8-117 (133)
109 1fo5_A Thioredoxin; disulfide 99.6 8.7E-16 3E-20 111.0 9.7 82 61-148 3-84 (85)
110 1a0r_P Phosducin, MEKA, PP33; 99.6 1.1E-15 3.8E-20 132.3 11.9 103 42-149 111-225 (245)
111 3fk8_A Disulphide isomerase; A 99.6 1.4E-15 4.7E-20 120.0 10.6 93 53-148 22-131 (133)
112 1wmj_A Thioredoxin H-type; str 99.6 3.9E-17 1.3E-21 128.3 1.5 108 39-151 10-123 (130)
113 1wou_A Thioredoxin -related pr 99.6 1.4E-15 4.9E-20 118.2 10.0 100 44-147 6-122 (123)
114 1nho_A Probable thioredoxin; b 99.6 1.1E-15 3.7E-20 110.5 7.7 82 62-149 3-84 (85)
115 2ywm_A Glutaredoxin-like prote 99.6 1.9E-15 6.6E-20 130.7 10.2 101 44-150 119-220 (229)
116 3iv4_A Putative oxidoreductase 99.6 5.3E-15 1.8E-19 110.6 11.0 98 43-145 6-111 (112)
117 2hls_A Protein disulfide oxido 99.6 9.9E-15 3.4E-19 127.2 13.7 103 48-153 125-229 (243)
118 3kp8_A Vkorc1/thioredoxin doma 99.6 1.1E-15 3.9E-20 115.3 5.6 76 60-148 12-93 (106)
119 3f9u_A Putative exported cytoc 99.5 1.5E-14 5.3E-19 119.2 8.4 102 45-149 28-165 (172)
120 2lst_A Thioredoxin; structural 99.3 7.3E-16 2.5E-20 121.0 0.0 98 50-150 9-116 (130)
121 3dml_A Putative uncharacterize 99.5 2.2E-14 7.5E-19 108.8 6.2 90 59-149 17-109 (116)
122 2ju5_A Thioredoxin disulfide i 99.5 1.5E-13 5.1E-18 111.2 11.6 93 54-150 41-152 (154)
123 1lu4_A Soluble secreted antige 99.5 1.2E-13 4.1E-18 108.8 10.6 87 59-149 23-135 (136)
124 1zzo_A RV1677; thioredoxin fol 99.5 3.5E-13 1.2E-17 105.9 13.3 88 59-150 24-135 (136)
125 1sen_A Thioredoxin-like protei 99.5 2.5E-14 8.6E-19 117.0 6.1 96 51-149 37-147 (164)
126 1ilo_A Conserved hypothetical 99.5 1.2E-13 4E-18 97.7 8.8 74 63-145 2-76 (77)
127 2b5x_A YKUV protein, TRXY; thi 99.5 3.4E-13 1.2E-17 107.7 12.4 102 46-150 15-145 (148)
128 2f9s_A Thiol-disulfide oxidore 99.5 8.4E-13 2.9E-17 106.1 13.9 111 33-152 6-140 (151)
129 1sji_A Calsequestrin 2, calseq 99.5 2.8E-12 9.5E-17 118.0 19.1 198 43-252 123-346 (350)
130 3erw_A Sporulation thiol-disul 99.5 5.1E-13 1.7E-17 106.3 12.2 107 29-145 11-144 (145)
131 3or5_A Thiol:disulfide interch 99.5 5.4E-13 1.9E-17 108.8 11.9 112 30-150 11-151 (165)
132 3bj5_A Protein disulfide-isome 99.5 2.4E-13 8.4E-18 108.6 9.3 115 246-361 7-127 (147)
133 3us3_A Calsequestrin-1; calciu 99.4 3.2E-12 1.1E-16 118.3 17.1 200 43-254 125-350 (367)
134 2h8l_A Protein disulfide-isome 99.4 7.2E-12 2.5E-16 109.8 18.0 192 43-251 6-229 (252)
135 2h30_A Thioredoxin, peptide me 99.4 6E-13 2E-17 108.5 10.1 105 44-150 22-156 (164)
136 2lja_A Putative thiol-disulfid 99.4 1.5E-12 5.3E-17 104.6 12.2 113 30-151 6-144 (152)
137 3gl3_A Putative thiol:disulfid 99.4 5E-12 1.7E-16 101.6 13.8 112 30-151 6-143 (152)
138 3fkf_A Thiol-disulfide oxidore 99.4 1.9E-12 6.5E-17 103.4 11.2 113 29-150 7-146 (148)
139 2l5o_A Putative thioredoxin; s 99.4 2.9E-12 9.9E-17 103.1 12.3 112 30-150 5-141 (153)
140 3ewl_A Uncharacterized conserv 99.4 3.6E-12 1.2E-16 101.2 12.5 110 29-149 3-140 (142)
141 3ph9_A Anterior gradient prote 99.4 4.7E-13 1.6E-17 107.2 7.2 98 51-149 35-144 (151)
142 3ia1_A THIO-disulfide isomeras 99.4 3.2E-12 1.1E-16 103.0 11.8 108 32-152 10-146 (154)
143 3raz_A Thioredoxin-related pro 99.4 3.7E-12 1.3E-16 102.4 12.0 91 59-151 23-141 (151)
144 3hcz_A Possible thiol-disulfid 99.4 1.5E-12 5.3E-17 103.9 9.6 110 30-148 8-144 (148)
145 4evm_A Thioredoxin family prot 99.4 5.1E-12 1.7E-16 99.2 12.5 105 34-148 3-137 (138)
146 2lrn_A Thiol:disulfide interch 99.4 4.7E-12 1.6E-16 101.9 12.2 108 32-150 8-141 (152)
147 1z6n_A Hypothetical protein PA 99.4 1.9E-12 6.6E-17 105.7 9.5 88 46-137 39-131 (167)
148 3kp9_A Vkorc1/thioredoxin doma 99.4 1.1E-12 3.7E-17 115.9 8.4 85 50-149 189-279 (291)
149 3ira_A Conserved protein; meth 99.4 1.4E-12 4.8E-17 106.6 8.0 82 46-130 25-118 (173)
150 3eur_A Uncharacterized protein 99.4 6.7E-12 2.3E-16 99.7 11.7 107 30-146 8-141 (142)
151 2fgx_A Putative thioredoxin; N 99.3 2.2E-12 7.6E-17 96.4 7.8 77 62-145 30-106 (107)
152 3hdc_A Thioredoxin family prot 99.3 1.7E-11 5.8E-16 99.3 13.2 91 59-151 40-153 (158)
153 3lor_A Thiol-disulfide isomera 99.3 1.4E-11 4.8E-16 99.8 12.5 90 59-150 29-155 (160)
154 2b1k_A Thiol:disulfide interch 99.3 3.5E-12 1.2E-16 104.4 8.8 107 37-149 25-159 (168)
155 1ttz_A Conserved hypothetical 99.3 2.5E-12 8.4E-17 92.8 6.6 75 64-150 3-77 (87)
156 3ec3_A Protein disulfide-isome 99.3 5.1E-11 1.7E-15 104.2 15.7 192 43-251 6-227 (250)
157 3eyt_A Uncharacterized protein 99.3 2E-11 7E-16 98.7 12.1 90 59-150 27-152 (158)
158 3lwa_A Secreted thiol-disulfid 99.3 3E-11 1E-15 100.4 13.3 91 59-149 58-180 (183)
159 3kcm_A Thioredoxin family prot 99.3 3E-11 1E-15 97.2 12.7 113 29-150 4-143 (154)
160 2lrt_A Uncharacterized protein 99.3 4.9E-11 1.7E-15 96.0 13.3 106 30-144 12-142 (152)
161 1kng_A Thiol:disulfide interch 99.3 7.4E-12 2.5E-16 101.0 8.3 86 59-149 41-151 (156)
162 3ha9_A Uncharacterized thiored 99.3 3.1E-11 1.1E-15 98.4 10.9 86 59-149 36-163 (165)
163 3fw2_A Thiol-disulfide oxidore 99.2 1.2E-10 4.1E-15 93.3 12.9 112 29-149 7-147 (150)
164 2djk_A PDI, protein disulfide- 99.2 2.4E-11 8.3E-16 95.5 8.6 109 250-361 3-115 (133)
165 3ed3_A Protein disulfide-isome 99.2 1.7E-10 5.9E-15 103.4 15.1 199 150-357 16-263 (298)
166 1i5g_A Tryparedoxin II; electr 99.2 8.8E-11 3E-15 93.4 10.7 72 59-131 27-124 (144)
167 1jfu_A Thiol:disulfide interch 99.2 2.7E-10 9.3E-15 94.7 13.9 111 32-151 39-181 (186)
168 3kh7_A Thiol:disulfide interch 99.2 1.4E-10 4.7E-15 95.8 11.7 85 59-149 57-166 (176)
169 1o73_A Tryparedoxin; electron 99.2 7.7E-11 2.6E-15 93.6 9.4 73 59-132 27-125 (144)
170 1o8x_A Tryparedoxin, TRYX, TXN 99.2 9.9E-11 3.4E-15 93.3 10.1 72 59-131 27-124 (146)
171 2hyx_A Protein DIPZ; thioredox 99.2 1.2E-10 4E-15 106.4 11.5 89 59-149 81-198 (352)
172 2ywi_A Hypothetical conserved 99.2 2E-10 6.8E-15 96.4 11.1 111 31-150 22-174 (196)
173 2cvb_A Probable thiol-disulfid 99.2 1.9E-10 6.6E-15 95.8 10.9 109 31-150 11-159 (188)
174 4fo5_A Thioredoxin-like protei 99.1 2.2E-10 7.7E-15 90.9 9.8 84 59-146 31-141 (143)
175 3s9f_A Tryparedoxin; thioredox 99.1 2E-10 6.7E-15 93.8 9.3 72 59-131 47-144 (165)
176 2lus_A Thioredoxion; CR-Trp16, 98.7 7.4E-12 2.5E-16 99.4 0.0 78 59-136 24-128 (143)
177 3u5r_E Uncharacterized protein 99.1 5.6E-10 1.9E-14 95.4 11.5 111 30-150 35-187 (218)
178 2e7p_A Glutaredoxin; thioredox 99.0 1.4E-10 4.8E-15 88.6 5.0 87 51-148 11-106 (116)
179 2r2j_A Thioredoxin domain-cont 99.0 2.2E-09 7.6E-14 99.7 14.1 192 44-251 119-328 (382)
180 1wjk_A C330018D20RIK protein; 99.0 3.6E-10 1.2E-14 84.0 6.8 81 59-150 14-96 (100)
181 3drn_A Peroxiredoxin, bacterio 99.0 1.9E-09 6.5E-14 87.4 11.5 96 30-134 5-129 (161)
182 2dlx_A UBX domain-containing p 99.0 1.7E-09 5.9E-14 86.5 10.7 95 51-149 29-135 (153)
183 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.6E-09 5.4E-14 104.9 12.2 96 46-148 102-198 (521)
184 2ls5_A Uncharacterized protein 98.6 3.5E-11 1.2E-15 97.4 0.0 88 59-148 32-146 (159)
185 2ggt_A SCO1 protein homolog, m 99.0 4E-09 1.4E-13 85.5 11.6 106 37-149 7-160 (164)
186 2rli_A SCO2 protein homolog, m 99.0 5.1E-09 1.8E-13 85.5 12.1 107 36-149 9-163 (171)
187 2k6v_A Putative cytochrome C o 99.0 9E-10 3.1E-14 90.1 7.5 90 59-148 34-171 (172)
188 2k8s_A Thioredoxin; dimer, str 99.0 3.5E-10 1.2E-14 80.3 3.6 63 63-130 3-66 (80)
189 2p31_A CL683, glutathione pero 98.9 3.8E-09 1.3E-13 87.4 10.0 111 30-149 26-180 (181)
190 2vup_A Glutathione peroxidase- 98.9 6.6E-09 2.3E-13 86.7 11.3 110 32-150 27-185 (190)
191 3cmi_A Peroxiredoxin HYR1; thi 98.9 3.6E-09 1.2E-13 86.7 9.4 108 33-150 12-168 (171)
192 1we0_A Alkyl hydroperoxide red 98.9 4.6E-09 1.6E-13 87.4 10.0 89 59-149 30-156 (187)
193 2p5q_A Glutathione peroxidase 98.9 7.7E-09 2.6E-13 84.3 11.1 112 30-150 9-168 (170)
194 2v1m_A Glutathione peroxidase; 98.9 9.5E-09 3.3E-13 83.7 11.4 112 29-149 7-166 (169)
195 1ego_A Glutaredoxin; electron 98.9 3.9E-09 1.3E-13 75.6 8.0 76 63-149 2-83 (85)
196 1xvw_A Hypothetical protein RV 98.9 1.1E-08 3.7E-13 82.6 10.7 109 30-147 12-157 (160)
197 3dwv_A Glutathione peroxidase- 98.9 1.5E-08 5.1E-13 84.3 11.7 112 30-150 23-183 (187)
198 2bmx_A Alkyl hydroperoxidase C 98.8 1.2E-08 4E-13 85.5 9.9 90 59-150 44-170 (195)
199 2obi_A PHGPX, GPX-4, phospholi 98.8 1.8E-08 6.1E-13 83.5 10.8 110 30-148 24-182 (183)
200 3q6o_A Sulfhydryl oxidase 1; p 98.8 2.5E-07 8.6E-12 80.2 18.4 192 151-361 12-236 (244)
201 1zof_A Alkyl hydroperoxide-red 98.8 1.6E-08 5.4E-13 84.9 9.6 89 59-149 32-160 (198)
202 3kij_A Probable glutathione pe 98.8 3.1E-08 1E-12 81.8 10.8 114 27-149 12-169 (180)
203 2f8a_A Glutathione peroxidase 98.8 2.8E-08 9.5E-13 84.1 10.6 68 28-104 21-89 (208)
204 2gs3_A PHGPX, GPX-4, phospholi 98.8 3.1E-08 1E-12 82.2 10.5 111 29-148 25-184 (185)
205 2l4c_A Endoplasmic reticulum r 98.8 9E-08 3.1E-12 73.6 11.7 95 43-148 21-122 (124)
206 1qmv_A Human thioredoxin perox 98.7 6E-08 2.1E-12 81.3 10.9 88 59-148 33-161 (197)
207 1eej_A Thiol:disulfide interch 98.7 2.3E-08 7.8E-13 85.2 8.4 80 60-148 86-209 (216)
208 3gyk_A 27KDA outer membrane pr 98.7 6.9E-08 2.4E-12 79.2 10.0 83 59-149 21-172 (175)
209 1xzo_A BSSCO, hypothetical pro 98.7 1.1E-07 3.8E-12 77.7 11.1 112 32-150 12-172 (174)
210 1t3b_A Thiol:disulfide interch 98.7 4.4E-08 1.5E-12 83.1 8.0 81 59-148 85-209 (211)
211 2b7k_A SCO1 protein; metalloch 98.7 1.4E-07 4.8E-12 79.3 10.7 110 34-150 22-179 (200)
212 1uul_A Tryparedoxin peroxidase 98.7 1.4E-07 4.6E-12 79.4 10.5 89 59-149 35-164 (202)
213 2l4c_A Endoplasmic reticulum r 98.6 4.2E-08 1.4E-12 75.5 5.8 100 146-252 14-124 (124)
214 3t58_A Sulfhydryl oxidase 1; o 98.6 1.6E-06 5.3E-11 83.3 17.4 192 152-361 13-236 (519)
215 1zye_A Thioredoxin-dependent p 98.6 2.8E-07 9.6E-12 78.6 11.0 89 59-149 55-184 (220)
216 2h01_A 2-Cys peroxiredoxin; th 98.6 2.1E-07 7.1E-12 77.6 9.7 88 59-148 30-157 (192)
217 2jsy_A Probable thiol peroxida 98.6 4.7E-07 1.6E-11 73.5 11.5 106 32-148 23-165 (167)
218 1h75_A Glutaredoxin-like prote 98.6 5.3E-08 1.8E-12 68.9 5.0 71 64-148 3-76 (81)
219 3gkn_A Bacterioferritin comigr 98.6 5.3E-07 1.8E-11 72.8 11.6 111 29-148 9-160 (163)
220 3ztl_A Thioredoxin peroxidase; 98.5 6.2E-07 2.1E-11 76.6 10.6 87 59-147 68-195 (222)
221 2a4v_A Peroxiredoxin DOT5; yea 98.5 7.8E-07 2.7E-11 71.6 10.5 100 30-138 10-139 (159)
222 1r7h_A NRDH-redoxin; thioredox 98.5 3.6E-07 1.2E-11 63.3 7.4 68 64-145 3-73 (75)
223 1v58_A Thiol:disulfide interch 98.5 6.5E-07 2.2E-11 77.4 10.4 85 61-150 98-233 (241)
224 2i3y_A Epididymal secretory gl 98.5 3.4E-06 1.2E-10 71.5 13.9 63 32-104 34-97 (215)
225 1xvq_A Thiol peroxidase; thior 98.5 7.4E-07 2.5E-11 73.1 9.5 88 32-131 23-143 (175)
226 3tco_A Thioredoxin (TRXA-1); d 98.5 1.6E-06 5.3E-11 64.6 10.5 106 252-361 3-109 (109)
227 1kte_A Thioltransferase; redox 98.4 3.9E-07 1.3E-11 67.9 6.7 70 51-130 3-79 (105)
228 3me7_A Putative uncharacterize 98.4 2.5E-06 8.4E-11 69.6 11.9 115 30-151 4-163 (170)
229 2i81_A 2-Cys peroxiredoxin; st 98.4 9.7E-07 3.3E-11 74.9 9.7 88 59-148 51-178 (213)
230 3die_A Thioredoxin, TRX; elect 98.4 2.7E-06 9.2E-11 63.0 11.1 102 254-360 4-106 (106)
231 3hxs_A Thioredoxin, TRXP; elec 98.4 2.5E-06 8.7E-11 66.9 11.4 105 253-361 22-139 (141)
232 1nsw_A Thioredoxin, TRX; therm 98.4 2.7E-06 9.2E-11 63.0 10.5 102 255-361 2-105 (105)
233 3gnj_A Thioredoxin domain prot 98.4 3.7E-06 1.3E-10 62.8 11.1 103 254-360 5-109 (111)
234 3qfa_C Thioredoxin; protein-pr 98.4 4.3E-06 1.5E-10 63.4 11.3 104 252-360 11-116 (116)
235 4g2e_A Peroxiredoxin; redox pr 98.4 3.8E-07 1.3E-11 73.4 5.4 110 29-147 6-155 (157)
236 3aps_A DNAJ homolog subfamily 98.4 2.8E-06 9.7E-11 64.8 9.9 104 254-361 4-113 (122)
237 2e0q_A Thioredoxin; electron t 98.3 3.8E-06 1.3E-10 61.7 10.2 101 256-361 2-103 (104)
238 2r37_A Glutathione peroxidase 98.3 5.6E-06 1.9E-10 69.7 12.3 63 32-104 16-79 (207)
239 2yzu_A Thioredoxin; redox prot 98.3 3.7E-06 1.3E-10 62.5 9.9 102 255-361 3-106 (109)
240 2l5l_A Thioredoxin; structural 98.3 6.2E-06 2.1E-10 64.4 11.5 104 255-362 11-127 (136)
241 1fb6_A Thioredoxin M; electron 98.3 7.4E-06 2.5E-10 60.4 11.4 102 255-360 2-105 (105)
242 1syr_A Thioredoxin; SGPP, stru 98.3 5.3E-06 1.8E-10 62.3 10.4 104 252-360 8-111 (112)
243 2hze_A Glutaredoxin-1; thiored 98.3 7E-07 2.4E-11 67.7 5.3 67 51-130 10-86 (114)
244 3h93_A Thiol:disulfide interch 98.3 2.1E-06 7E-11 71.5 8.5 86 59-149 24-183 (192)
245 2trx_A Thioredoxin; electron t 98.3 1.1E-05 3.7E-10 59.9 11.5 102 255-361 4-108 (108)
246 3hz4_A Thioredoxin; NYSGXRC, P 98.3 3.5E-06 1.2E-10 66.2 9.0 105 253-361 6-112 (140)
247 1dby_A Chloroplast thioredoxin 98.3 8E-06 2.7E-10 60.5 10.6 102 255-361 3-107 (107)
248 3m9j_A Thioredoxin; oxidoreduc 98.3 7.9E-06 2.7E-10 60.3 10.5 96 260-360 8-105 (105)
249 3hd5_A Thiol:disulfide interch 98.3 2.9E-06 9.9E-11 70.7 8.7 43 59-104 24-66 (195)
250 2cq9_A GLRX2 protein, glutared 98.2 1.4E-06 4.9E-11 67.6 6.1 68 50-130 17-91 (130)
251 4euy_A Uncharacterized protein 98.2 3.6E-06 1.2E-10 62.5 8.0 98 260-361 8-105 (105)
252 2vim_A Thioredoxin, TRX; thior 98.2 1.1E-05 3.9E-10 59.3 10.8 99 257-360 3-104 (104)
253 2ht9_A Glutaredoxin-2; thiored 98.2 2E-06 6.9E-11 68.1 6.9 68 50-130 39-113 (146)
254 1thx_A Thioredoxin, thioredoxi 98.2 1.3E-05 4.4E-10 60.2 11.2 104 253-361 7-113 (115)
255 3f3q_A Thioredoxin-1; His TAG, 98.2 1.7E-05 5.7E-10 59.3 11.5 100 255-360 9-109 (109)
256 2i4a_A Thioredoxin; acidophIle 98.2 1.2E-05 4E-10 59.5 10.5 101 255-360 4-107 (107)
257 3bj5_A Protein disulfide-isome 98.2 2.8E-05 9.6E-10 61.6 12.8 109 43-154 14-131 (147)
258 1w4v_A Thioredoxin, mitochondr 98.2 1.6E-05 5.5E-10 60.4 11.1 105 252-361 12-119 (119)
259 3p2a_A Thioredoxin 2, putative 98.2 1.2E-05 4.3E-10 63.6 10.8 104 254-361 39-143 (148)
260 2yan_A Glutaredoxin-3; oxidore 98.2 3.8E-06 1.3E-10 62.5 7.0 67 51-130 8-83 (105)
261 2i1u_A Thioredoxin, TRX, MPT46 98.2 1.3E-05 4.6E-10 60.8 10.3 106 252-361 11-118 (121)
262 2voc_A Thioredoxin; electron t 98.2 9.4E-06 3.2E-10 60.9 9.2 102 255-362 3-106 (112)
263 2ppt_A Thioredoxin-2; thiredox 98.2 1.4E-05 4.8E-10 64.0 10.4 103 255-361 49-152 (155)
264 1t00_A Thioredoxin, TRX; redox 98.2 2E-05 6.8E-10 58.9 10.8 104 254-361 6-111 (112)
265 1r26_A Thioredoxin; redox-acti 98.2 1.3E-05 4.4E-10 61.6 9.8 101 255-361 21-123 (125)
266 2o8v_B Thioredoxin 1; disulfid 98.2 1.5E-05 5E-10 61.6 10.1 102 255-361 24-128 (128)
267 2qsi_A Putative hydrogenase ex 98.1 1.4E-05 4.6E-10 62.1 9.6 101 256-360 18-122 (137)
268 2dml_A Protein disulfide-isome 98.1 7.2E-06 2.5E-10 63.2 8.2 103 254-360 18-123 (130)
269 1v98_A Thioredoxin; oxidoreduc 98.1 1.6E-05 5.3E-10 62.3 10.2 104 253-361 33-138 (140)
270 1xwb_A Thioredoxin; dimerizati 98.1 2.6E-05 8.8E-10 57.5 10.6 100 256-360 3-106 (106)
271 2c0d_A Thioredoxin peroxidase 98.1 1.4E-05 4.6E-10 68.1 10.2 88 59-148 55-182 (221)
272 1x5d_A Protein disulfide-isome 98.1 1.1E-05 3.8E-10 62.4 8.9 105 253-361 7-117 (133)
273 2vlu_A Thioredoxin, thioredoxi 98.1 2.2E-05 7.6E-10 59.7 10.2 104 252-361 12-120 (122)
274 3ixr_A Bacterioferritin comigr 98.1 6E-06 2E-10 67.8 7.4 88 59-148 50-176 (179)
275 4gqc_A Thiol peroxidase, perox 98.1 1.5E-06 5.2E-11 70.4 3.4 114 29-149 7-159 (164)
276 1psq_A Probable thiol peroxida 98.1 2.4E-05 8.3E-10 63.0 10.6 107 30-147 19-162 (163)
277 1tp9_A Peroxiredoxin, PRX D (t 98.1 2E-05 6.7E-10 63.5 10.0 69 59-129 34-139 (162)
278 3c1r_A Glutaredoxin-1; oxidize 98.1 3.4E-06 1.2E-10 64.3 5.1 70 51-130 16-93 (118)
279 4hde_A SCO1/SENC family lipopr 98.1 6E-05 2E-09 61.2 12.9 68 30-104 9-77 (170)
280 3ic4_A Glutaredoxin (GRX-1); s 98.1 6.1E-06 2.1E-10 59.7 6.0 70 63-146 13-91 (92)
281 2l57_A Uncharacterized protein 98.1 3.7E-05 1.3E-09 58.9 10.9 104 255-362 6-118 (126)
282 3h79_A Thioredoxin-like protei 98.1 3.5E-05 1.2E-09 59.2 10.6 102 253-358 15-125 (127)
283 3uvt_A Thioredoxin domain-cont 98.1 3.1E-05 1.1E-09 57.6 10.0 100 254-358 6-109 (111)
284 3p7x_A Probable thiol peroxida 98.1 2.1E-05 7.3E-10 63.6 9.6 106 30-147 23-165 (166)
285 1gh2_A Thioredoxin-like protei 98.1 4.6E-05 1.6E-09 56.4 10.8 97 259-360 8-106 (107)
286 2klx_A Glutaredoxin; thioredox 98.0 4.5E-06 1.5E-10 60.0 4.8 57 63-130 7-66 (89)
287 2wz9_A Glutaredoxin-3; protein 98.0 4.3E-05 1.5E-09 60.9 11.0 103 253-361 12-118 (153)
288 1n8j_A AHPC, alkyl hydroperoxi 98.0 2.7E-05 9.1E-10 64.3 10.1 89 59-149 29-155 (186)
289 2pu9_C TRX-F, thioredoxin F-ty 98.0 5.4E-05 1.8E-09 56.5 10.8 102 253-360 5-110 (111)
290 1nm3_A Protein HI0572; hybrid, 98.0 3E-05 1E-09 66.8 10.6 70 59-130 32-137 (241)
291 3gv1_A Disulfide interchange p 98.0 8.7E-06 3E-10 64.5 6.4 81 59-150 13-139 (147)
292 2xc2_A Thioredoxinn; oxidoredu 98.0 5.4E-05 1.9E-09 57.1 10.5 100 255-360 15-117 (117)
293 2dj1_A Protein disulfide-isome 98.0 1.3E-05 4.3E-10 62.7 7.2 103 254-361 18-124 (140)
294 1faa_A Thioredoxin F; electron 98.0 5.7E-05 1.9E-09 57.6 10.6 105 252-361 17-124 (124)
295 3rhb_A ATGRXC5, glutaredoxin-C 98.0 9.4E-06 3.2E-10 61.2 6.0 68 51-131 10-85 (113)
296 3dxb_A Thioredoxin N-terminall 98.0 5.1E-05 1.7E-09 64.5 11.3 106 252-361 11-118 (222)
297 2yzh_A Probable thiol peroxida 98.0 3.2E-05 1.1E-09 62.8 9.5 104 32-147 26-169 (171)
298 2wfc_A Peroxiredoxin 5, PRDX5; 98.0 2.7E-05 9.2E-10 63.1 9.0 67 30-104 6-76 (167)
299 3zzx_A Thioredoxin; oxidoreduc 98.0 7.9E-05 2.7E-09 55.2 10.8 93 260-357 8-102 (105)
300 2pn8_A Peroxiredoxin-4; thiore 98.0 3.8E-05 1.3E-09 64.8 10.2 88 59-148 47-175 (211)
301 1ep7_A Thioredoxin CH1, H-type 98.0 5.8E-05 2E-09 56.3 10.0 100 256-361 5-111 (112)
302 1z6m_A Conserved hypothetical 98.0 5.7E-05 1.9E-09 61.6 10.7 83 59-146 26-174 (175)
303 3qmx_A Glutaredoxin A, glutare 98.0 1.5E-05 5.1E-10 58.6 6.4 60 60-130 14-78 (99)
304 3qpm_A Peroxiredoxin; oxidored 98.0 5.7E-05 1.9E-09 65.1 10.9 88 59-148 76-204 (240)
305 2vm1_A Thioredoxin, thioredoxi 98.0 8.4E-05 2.9E-09 55.9 10.8 102 255-361 8-114 (118)
306 3a2v_A Probable peroxiredoxin; 98.0 2E-05 6.7E-10 68.2 8.0 91 56-148 29-160 (249)
307 2qgv_A Hydrogenase-1 operon pr 97.9 2E-05 6.8E-10 61.4 7.1 104 254-361 18-125 (140)
308 1un2_A DSBA, thiol-disulfide i 97.9 2.6E-06 8.9E-11 71.2 2.2 44 60-106 113-159 (197)
309 3apq_A DNAJ homolog subfamily 97.9 4.4E-05 1.5E-09 64.3 9.9 104 253-361 97-202 (210)
310 1x5e_A Thioredoxin domain cont 97.9 3.6E-05 1.2E-09 59.0 8.5 101 253-360 7-109 (126)
311 2oe3_A Thioredoxin-3; electron 97.9 5.2E-05 1.8E-09 57.1 9.1 98 255-358 14-113 (114)
312 3d6i_A Monothiol glutaredoxin- 97.9 6.3E-05 2.2E-09 56.1 9.5 100 256-361 3-109 (112)
313 2j23_A Thioredoxin; immune pro 97.9 4.2E-05 1.4E-09 58.2 8.5 102 254-360 16-120 (121)
314 2znm_A Thiol:disulfide interch 97.9 2.5E-05 8.6E-10 64.9 7.7 41 60-103 22-62 (195)
315 1ti3_A Thioredoxin H, PTTRXH1; 97.9 6.8E-05 2.3E-09 55.9 9.4 97 259-361 11-112 (113)
316 1mek_A Protein disulfide isome 97.9 1.6E-05 5.6E-10 60.0 5.8 103 255-361 9-117 (120)
317 1xfl_A Thioredoxin H1; AT3G510 97.9 0.00014 4.8E-09 55.6 10.9 97 259-361 23-124 (124)
318 2l6c_A Thioredoxin; oxidoreduc 97.9 9.5E-05 3.2E-09 55.2 9.5 99 256-360 6-105 (110)
319 2es7_A Q8ZP25_salty, putative 97.9 1.8E-05 6.2E-10 62.3 5.6 104 254-361 18-125 (142)
320 3ul3_B Thioredoxin, thioredoxi 97.8 4.7E-05 1.6E-09 58.5 7.7 103 252-358 24-127 (128)
321 1fov_A Glutaredoxin 3, GRX3; a 97.8 3.3E-05 1.1E-09 54.2 6.2 67 64-146 3-73 (82)
322 1q98_A Thiol peroxidase, TPX; 97.8 4.5E-05 1.5E-09 61.6 7.8 66 30-106 20-86 (165)
323 2djj_A PDI, protein disulfide- 97.8 5.3E-05 1.8E-09 57.4 7.3 103 253-362 7-118 (121)
324 3nzn_A Glutaredoxin; structura 97.8 5.6E-05 1.9E-09 55.8 7.1 72 61-145 21-101 (103)
325 1oaz_A Thioredoxin 1; immune s 97.8 2.9E-05 9.9E-10 59.4 5.7 102 255-361 5-123 (123)
326 2khp_A Glutaredoxin; thioredox 97.8 3.8E-05 1.3E-09 55.4 5.8 57 63-130 7-67 (92)
327 3ga4_A Dolichyl-diphosphooligo 97.8 0.00013 4.6E-09 59.3 9.5 93 243-338 8-114 (178)
328 3msz_A Glutaredoxin 1; alpha-b 97.8 0.00013 4.5E-09 51.9 8.5 74 62-149 4-86 (89)
329 2dj3_A Protein disulfide-isome 97.7 6.8E-05 2.3E-09 57.9 7.1 106 252-361 6-118 (133)
330 4dvc_A Thiol:disulfide interch 97.7 0.00011 3.7E-09 60.2 8.7 33 59-91 20-52 (184)
331 2rem_A Disulfide oxidoreductas 97.7 0.00021 7.1E-09 59.1 10.5 41 60-103 25-65 (193)
332 3tjj_A Peroxiredoxin-4; thiore 97.7 0.00012 4.1E-09 63.6 9.1 87 59-147 90-217 (254)
333 3zrd_A Thiol peroxidase; oxido 97.7 8.4E-05 2.9E-09 62.1 7.8 66 30-106 55-121 (200)
334 3h8q_A Thioredoxin reductase 3 97.7 7.1E-05 2.4E-09 56.4 6.6 68 50-130 7-81 (114)
335 3d22_A TRXH4, thioredoxin H-ty 97.7 0.00021 7.2E-09 55.6 9.6 97 259-361 31-132 (139)
336 2lqo_A Putative glutaredoxin R 97.7 8.1E-05 2.8E-09 53.6 6.4 75 63-150 5-84 (92)
337 2f51_A Thioredoxin; electron t 97.7 0.00037 1.3E-08 52.6 10.3 79 254-336 4-85 (118)
338 3qou_A Protein YBBN; thioredox 97.7 0.00011 3.7E-09 65.0 8.4 105 252-360 6-113 (287)
339 3uma_A Hypothetical peroxiredo 97.6 0.0001 3.4E-09 60.7 6.6 43 60-104 56-101 (184)
340 3evi_A Phosducin-like protein 97.6 0.00054 1.8E-08 51.9 10.2 100 252-358 2-111 (118)
341 3mng_A Peroxiredoxin-5, mitoch 97.6 0.00018 6.1E-09 58.6 8.0 56 59-116 42-103 (173)
342 2yj7_A LPBCA thioredoxin; oxid 96.8 8.9E-06 3E-10 59.9 0.0 100 256-360 4-106 (106)
343 2ec4_A FAS-associated factor 1 97.6 0.00081 2.8E-08 54.8 11.7 88 58-148 53-166 (178)
344 2pwj_A Mitochondrial peroxired 97.6 8.2E-05 2.8E-09 60.5 5.5 59 59-119 43-107 (171)
345 3emx_A Thioredoxin; structural 97.6 0.00034 1.2E-08 54.3 8.9 100 255-361 18-126 (135)
346 2v2g_A Peroxiredoxin 6; oxidor 97.6 0.00042 1.4E-08 59.2 10.1 86 61-148 30-163 (233)
347 1prx_A HORF6; peroxiredoxin, h 97.5 0.00084 2.9E-08 57.0 11.7 85 62-148 34-167 (224)
348 3ctg_A Glutaredoxin-2; reduced 97.5 0.0002 6.7E-09 55.3 6.9 71 50-130 27-105 (129)
349 1wik_A Thioredoxin-like protei 97.5 0.00014 4.7E-09 54.3 5.9 67 51-130 6-81 (109)
350 2dj0_A Thioredoxin-related tra 97.5 8.2E-05 2.8E-09 57.9 4.7 104 254-358 8-118 (137)
351 1lu4_A Soluble secreted antige 97.4 0.00095 3.3E-08 51.2 10.0 89 269-361 23-136 (136)
352 2c0g_A ERP29 homolog, windbeut 97.4 0.00057 1.9E-08 58.9 9.0 102 253-360 16-131 (248)
353 2fwh_A Thiol:disulfide interch 97.4 0.00057 2E-08 52.8 8.3 85 270-358 31-125 (134)
354 1nho_A Probable thioredoxin; b 97.4 0.00041 1.4E-08 48.6 6.4 77 278-361 8-85 (85)
355 1zzo_A RV1677; thioredoxin fol 97.3 0.002 7E-08 49.2 10.4 89 269-361 24-135 (136)
356 1xcc_A 1-Cys peroxiredoxin; un 97.3 0.001 3.6E-08 56.3 9.3 85 62-148 34-164 (220)
357 3hz8_A Thiol:disulfide interch 97.3 0.00034 1.2E-08 58.0 6.2 45 59-106 23-67 (193)
358 1zma_A Bacterocin transport ac 97.3 0.00037 1.3E-08 52.4 5.9 102 252-357 11-117 (118)
359 2av4_A Thioredoxin-like protei 97.3 0.00083 2.8E-08 53.1 7.8 103 255-361 23-139 (160)
360 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.016 5.3E-07 55.7 18.5 137 216-359 60-198 (521)
361 3gix_A Thioredoxin-like protei 97.3 0.0014 4.8E-08 51.7 9.3 98 259-360 10-120 (149)
362 1fo5_A Thioredoxin; disulfide 97.3 0.00041 1.4E-08 48.6 5.5 80 273-360 5-85 (85)
363 2qc7_A ERP31, ERP28, endoplasm 97.3 0.0011 3.8E-08 56.7 9.0 102 254-359 6-117 (240)
364 3keb_A Probable thiol peroxida 97.3 0.0019 6.5E-08 54.5 10.3 107 29-149 24-175 (224)
365 2dbc_A PDCL2, unnamed protein 97.2 0.0028 9.7E-08 48.9 10.2 101 251-358 8-118 (135)
366 3cxg_A Putative thioredoxin; m 97.1 0.0019 6.3E-08 49.9 8.3 101 255-361 22-129 (133)
367 1qgv_A Spliceosomal protein U5 97.1 0.002 6.7E-08 50.4 8.3 75 259-337 10-87 (142)
368 3fk8_A Disulphide isomerase; A 97.1 0.0011 3.6E-08 51.0 6.5 92 268-360 27-132 (133)
369 2kuc_A Putative disulphide-iso 97.0 0.0014 4.9E-08 50.0 6.7 89 269-361 26-121 (130)
370 1wou_A Thioredoxin -related pr 97.0 0.0017 5.8E-08 49.3 7.1 99 255-357 7-121 (123)
371 1wmj_A Thioredoxin H-type; str 97.0 0.0001 3.6E-09 56.5 -0.0 101 255-361 16-122 (130)
372 3gha_A Disulfide bond formatio 96.9 0.0056 1.9E-07 50.9 10.0 87 59-150 28-192 (202)
373 3l9v_A Putative thiol-disulfid 96.8 0.00049 1.7E-08 56.8 2.8 42 61-105 15-59 (189)
374 3sbc_A Peroxiredoxin TSA1; alp 96.8 0.011 3.9E-07 49.4 11.0 111 30-147 26-178 (216)
375 3or5_A Thiol:disulfide interch 96.8 0.0071 2.4E-07 48.0 9.4 89 269-361 33-151 (165)
376 2trc_P Phosducin, MEKA, PP33; 96.8 0.0025 8.6E-08 53.7 6.6 81 253-339 99-183 (217)
377 3l4n_A Monothiol glutaredoxin- 96.7 0.0028 9.5E-08 48.5 6.1 70 51-130 5-81 (127)
378 2b5x_A YKUV protein, TRXY; thi 96.7 0.0081 2.8E-07 46.5 9.1 89 269-361 28-145 (148)
379 3iv4_A Putative oxidoreductase 96.7 0.006 2E-07 45.2 7.4 91 260-354 14-109 (112)
380 3ha9_A Uncharacterized thiored 96.6 0.02 6.8E-07 45.4 11.0 88 269-361 36-164 (165)
381 2ju5_A Thioredoxin disulfide i 96.6 0.01 3.5E-07 46.9 8.7 92 268-362 45-153 (154)
382 3feu_A Putative lipoprotein; a 96.6 0.0012 4.2E-08 54.2 3.2 40 60-104 22-61 (185)
383 3qcp_A QSOX from trypanosoma b 96.5 0.0033 1.1E-07 59.0 6.4 81 254-338 24-115 (470)
384 3erw_A Sporulation thiol-disul 96.5 0.015 5E-07 44.8 9.3 84 269-356 33-144 (145)
385 1a0r_P Phosducin, MEKA, PP33; 96.5 0.009 3.1E-07 51.2 8.1 82 252-339 111-196 (245)
386 2wci_A Glutaredoxin-4; redox-a 96.3 0.0035 1.2E-07 48.5 4.3 68 51-130 26-101 (135)
387 3fkf_A Thiol-disulfide oxidore 96.3 0.023 7.9E-07 43.9 9.2 87 269-361 32-146 (148)
388 2f9s_A Thiol-disulfide oxidore 96.3 0.021 7.1E-07 44.5 8.8 89 269-361 25-138 (151)
389 2lst_A Thioredoxin; structural 95.2 0.00074 2.5E-08 51.7 0.0 95 263-361 12-116 (130)
390 1z6n_A Hypothetical protein PA 96.2 0.026 9E-07 45.3 9.2 84 257-340 40-123 (167)
391 2lrn_A Thiol:disulfide interch 96.2 0.032 1.1E-06 43.5 9.6 87 269-361 28-141 (152)
392 4eo3_A Bacterioferritin comigr 96.0 0.053 1.8E-06 48.5 11.2 104 33-149 4-138 (322)
393 3f4s_A Alpha-DSBA1, putative u 96.0 0.022 7.5E-07 48.2 8.1 41 60-101 39-80 (226)
394 4f82_A Thioredoxin reductase; 96.0 0.021 7.2E-07 46.2 7.5 50 53-104 41-92 (176)
395 3ipz_A Monothiol glutaredoxin- 95.9 0.0095 3.2E-07 44.1 5.0 67 51-130 9-84 (109)
396 3tue_A Tryparedoxin peroxidase 95.9 0.061 2.1E-06 45.0 10.3 69 29-104 28-99 (219)
397 3raz_A Thioredoxin-related pro 95.9 0.061 2.1E-06 41.8 9.9 91 269-361 23-140 (151)
398 3gx8_A Monothiol glutaredoxin- 95.9 0.017 5.7E-07 43.7 6.2 68 51-130 7-85 (121)
399 1aba_A Glutaredoxin; electron 95.8 0.013 4.6E-07 41.2 5.1 57 64-130 2-76 (87)
400 3ia1_A THIO-disulfide isomeras 95.7 0.059 2E-06 42.0 9.2 86 271-361 31-144 (154)
401 4evm_A Thioredoxin family prot 95.7 0.074 2.5E-06 40.1 9.5 86 269-358 21-136 (138)
402 3lor_A Thiol-disulfide isomera 95.6 0.092 3.1E-06 41.1 10.0 88 270-361 30-155 (160)
403 2l5o_A Putative thioredoxin; s 95.6 0.049 1.7E-06 42.3 8.3 89 269-361 27-141 (153)
404 2wem_A Glutaredoxin-related pr 95.6 0.016 5.3E-07 43.6 4.9 67 51-130 11-87 (118)
405 3kcm_A Thioredoxin family prot 95.6 0.096 3.3E-06 40.6 9.9 89 269-361 27-143 (154)
406 1t1v_A SH3BGRL3, SH3 domain-bi 95.5 0.017 5.7E-07 41.3 4.8 56 64-130 4-71 (93)
407 3zyw_A Glutaredoxin-3; metal b 95.5 0.013 4.6E-07 43.5 4.4 67 51-130 7-82 (111)
408 1nm3_A Protein HI0572; hybrid, 95.5 0.028 9.5E-07 47.9 6.9 59 61-130 169-230 (241)
409 2lja_A Putative thiol-disulfid 95.5 0.041 1.4E-06 42.7 7.4 88 270-361 30-143 (152)
410 3gl3_A Putative thiol:disulfid 95.5 0.12 4E-06 40.0 10.0 89 269-361 27-142 (152)
411 2ct6_A SH3 domain-binding glut 95.5 0.022 7.4E-07 42.3 5.3 57 63-130 9-83 (111)
412 2h30_A Thioredoxin, peptide me 95.3 0.031 1.1E-06 44.1 6.2 102 256-361 24-156 (164)
413 3l9s_A Thiol:disulfide interch 95.2 0.013 4.3E-07 48.3 3.6 39 61-102 22-63 (191)
414 3fw2_A Thiol-disulfide oxidore 95.2 0.12 4.1E-06 40.0 9.1 86 270-361 33-148 (150)
415 1kng_A Thiol:disulfide interch 95.1 0.11 3.8E-06 40.3 8.8 87 270-361 42-152 (156)
416 3hdc_A Thioredoxin family prot 95.1 0.14 4.8E-06 40.1 9.4 68 269-340 40-128 (158)
417 3ira_A Conserved protein; meth 94.9 0.051 1.7E-06 43.8 6.2 90 246-339 13-116 (173)
418 3hcz_A Possible thiol-disulfid 94.9 0.06 2E-06 41.4 6.6 85 269-359 30-141 (148)
419 1sen_A Thioredoxin-like protei 94.8 0.014 4.9E-07 46.6 2.9 98 262-361 38-148 (164)
420 2b1k_A Thiol:disulfide interch 94.8 0.13 4.4E-06 40.7 8.6 87 269-361 50-160 (168)
421 3eyt_A Uncharacterized protein 94.8 0.18 6E-06 39.3 9.3 88 270-361 28-152 (158)
422 1jfu_A Thiol:disulfide interch 94.6 0.27 9.1E-06 39.6 10.0 91 270-361 60-180 (186)
423 3lwa_A Secreted thiol-disulfid 94.6 0.12 4.1E-06 41.6 7.9 92 269-361 58-181 (183)
424 1ilo_A Conserved hypothetical 94.5 0.11 3.7E-06 35.0 6.5 70 276-356 5-76 (77)
425 2ywi_A Hypothetical conserved 94.2 0.21 7.1E-06 40.6 8.5 86 272-361 48-174 (196)
426 3f9u_A Putative exported cytoc 94.1 0.078 2.7E-06 42.3 5.8 91 267-361 44-166 (172)
427 2axo_A Hypothetical protein AT 94.0 0.042 1.5E-06 47.4 4.1 81 59-148 41-141 (270)
428 1o8x_A Tryparedoxin, TRYX, TXN 93.9 0.34 1.2E-05 37.1 9.1 68 269-340 27-122 (146)
429 1i5g_A Tryparedoxin II; electr 93.9 0.36 1.2E-05 36.9 9.0 68 269-340 27-122 (144)
430 2cvb_A Probable thiol-disulfid 93.9 0.31 1.1E-05 39.3 9.0 87 270-361 33-159 (188)
431 1o73_A Tryparedoxin; electron 93.8 0.36 1.2E-05 36.8 8.9 68 269-340 27-122 (144)
432 3s9f_A Tryparedoxin; thioredox 93.8 0.39 1.3E-05 38.0 9.3 68 270-341 48-143 (165)
433 3kh7_A Thiol:disulfide interch 93.8 0.36 1.2E-05 38.6 9.2 86 270-361 58-167 (176)
434 2wul_A Glutaredoxin related pr 93.1 0.13 4.3E-06 38.5 4.8 70 50-130 10-87 (118)
435 3c7m_A Thiol:disulfide interch 93.1 0.15 5.2E-06 41.5 5.9 41 60-103 17-58 (195)
436 2lrt_A Uncharacterized protein 92.7 0.38 1.3E-05 37.3 7.5 67 270-340 35-126 (152)
437 3u5r_E Uncharacterized protein 92.2 0.59 2E-05 38.9 8.5 85 273-361 62-187 (218)
438 1ttz_A Conserved hypothetical 92.0 0.41 1.4E-05 33.5 6.1 73 277-361 5-77 (87)
439 3ewl_A Uncharacterized conserv 92.0 0.61 2.1E-05 35.4 7.7 85 270-360 27-140 (142)
440 1u6t_A SH3 domain-binding glut 91.9 0.47 1.6E-05 35.5 6.6 62 64-130 2-75 (121)
441 2hyx_A Protein DIPZ; thioredox 91.5 0.56 1.9E-05 42.3 8.0 88 270-361 82-199 (352)
442 3eur_A Uncharacterized protein 91.5 1.3 4.4E-05 33.6 9.2 81 270-356 31-140 (142)
443 2fgx_A Putative thioredoxin; N 90.9 0.57 2E-05 34.2 6.1 75 275-356 32-106 (107)
444 3tdg_A DSBG, putative uncharac 90.9 0.2 6.9E-06 43.2 4.2 28 60-87 147-174 (273)
445 2in3_A Hypothetical protein; D 89.9 0.47 1.6E-05 39.2 5.6 45 105-149 164-209 (216)
446 2dlx_A UBX domain-containing p 89.6 0.99 3.4E-05 35.3 7.0 90 266-360 38-135 (153)
447 3gn3_A Putative protein-disulf 89.3 0.6 2.1E-05 37.7 5.7 42 59-102 13-54 (182)
448 3kp8_A Vkorc1/thioredoxin doma 88.9 0.76 2.6E-05 33.3 5.4 70 273-356 15-90 (106)
449 3drn_A Peroxiredoxin, bacterio 88.7 2.2 7.7E-05 33.1 8.6 68 273-340 32-123 (161)
450 2jad_A Yellow fluorescent prot 88.5 0.33 1.1E-05 43.7 3.8 71 52-130 253-329 (362)
451 4fo5_A Thioredoxin-like protei 88.5 2 6.8E-05 32.5 8.0 69 270-342 32-128 (143)
452 2kok_A Arsenate reductase; bru 88.3 2.1 7.2E-05 31.8 7.7 35 64-107 7-41 (120)
453 1v58_A Thiol:disulfide interch 88.2 2.6 8.8E-05 35.6 9.2 88 270-361 96-233 (241)
454 2x8g_A Thioredoxin glutathione 88.1 0.71 2.4E-05 44.9 6.2 67 51-130 9-82 (598)
455 1ego_A Glutaredoxin; electron 88.0 1.2 4.2E-05 30.2 5.9 57 276-333 4-64 (85)
456 2rli_A SCO2 protein homolog, m 87.8 2.2 7.4E-05 33.4 8.0 34 328-361 130-164 (171)
457 3bci_A Disulfide bond protein 87.6 1.2 4.2E-05 35.7 6.5 42 60-102 11-53 (186)
458 3gmf_A Protein-disulfide isome 87.2 1.4 4.8E-05 36.3 6.7 44 59-103 14-58 (205)
459 2k8s_A Thioredoxin; dimer, str 86.4 1.5 5.1E-05 29.6 5.5 51 280-333 9-61 (80)
460 2bmx_A Alkyl hydroperoxidase C 85.6 2 6.8E-05 34.7 6.8 47 314-360 116-169 (195)
461 2k6v_A Putative cytochrome C o 85.0 2.4 8.2E-05 33.1 6.9 89 270-360 35-172 (172)
462 3bci_A Disulfide bond protein 84.3 0.86 2.9E-05 36.7 3.9 40 106-149 138-177 (186)
463 1t4y_A Adaptive-response senso 84.2 9.5 0.00033 27.3 10.3 85 63-148 13-97 (105)
464 2ggt_A SCO1 protein homolog, m 83.5 4.9 0.00017 30.9 8.1 32 330-361 129-161 (164)
465 2lus_A Thioredoxion; CR-Trp16, 84.0 0.22 7.6E-06 37.9 0.0 24 314-340 98-121 (143)
466 1we0_A Alkyl hydroperoxide red 83.4 2.6 8.8E-05 33.7 6.5 47 314-360 102-156 (187)
467 1xiy_A Peroxiredoxin, pfaop; a 83.4 1.8 6.1E-05 34.9 5.4 57 59-116 42-104 (182)
468 3gyk_A 27KDA outer membrane pr 83.4 4.4 0.00015 31.8 7.9 41 269-309 20-60 (175)
469 2jsy_A Probable thiol peroxida 82.5 7.5 0.00026 30.1 8.9 90 270-360 44-166 (167)
470 2ls5_A Uncharacterized protein 83.1 0.26 8.9E-06 38.4 0.0 45 315-360 103-147 (159)
471 3dml_A Putative uncharacterize 82.3 0.97 3.3E-05 33.5 3.1 43 207-250 66-108 (116)
472 3ph9_A Anterior gradient prote 82.2 12 0.00043 28.8 9.8 77 174-250 46-143 (151)
473 1xvw_A Hypothetical protein RV 81.6 3.1 0.00011 32.0 6.2 69 272-340 38-134 (160)
474 3kzq_A Putative uncharacterize 81.5 1.6 5.6E-05 35.7 4.7 43 107-149 159-202 (208)
475 2p5q_A Glutathione peroxidase 81.3 9.2 0.00031 29.5 9.0 93 270-363 32-170 (170)
476 3cmi_A Peroxiredoxin HYR1; thi 81.1 5.1 0.00018 31.3 7.4 92 269-362 31-169 (171)
477 1uul_A Tryparedoxin peroxidase 80.2 4.5 0.00015 32.8 6.9 46 315-360 111-164 (202)
478 3gn3_A Putative protein-disulf 79.4 1.5 5.3E-05 35.3 3.7 36 108-145 145-181 (182)
479 3ktb_A Arsenical resistance op 79.0 8.9 0.00031 27.7 7.1 64 79-146 26-102 (106)
480 2xhf_A Peroxiredoxin 5; oxidor 78.5 3.2 0.00011 33.0 5.3 55 59-115 41-100 (171)
481 1z3e_A Regulatory protein SPX; 77.9 1.8 6.3E-05 32.7 3.5 34 64-106 3-36 (132)
482 1zye_A Thioredoxin-dependent p 77.2 8.2 0.00028 31.8 7.7 47 314-360 130-184 (220)
483 3kgk_A Arsenical resistance op 76.8 10 0.00034 27.6 6.9 51 96-148 41-101 (110)
484 1zof_A Alkyl hydroperoxide-red 76.2 2.3 7.8E-05 34.4 3.9 47 314-360 107-160 (198)
485 1xvq_A Thiol peroxidase; thior 76.1 7.9 0.00027 30.4 7.1 46 314-360 109-164 (175)
486 3feu_A Putative lipoprotein; a 73.6 2.3 8E-05 34.2 3.3 42 106-149 141-183 (185)
487 3gmf_A Protein-disulfide isome 73.5 3.3 0.00011 34.0 4.2 40 107-150 157-197 (205)
488 3l78_A Regulatory protein SPX; 73.4 3.2 0.00011 30.8 3.8 34 64-106 2-35 (120)
489 2i81_A 2-Cys peroxiredoxin; st 73.3 13 0.00044 30.4 7.9 29 314-342 126-156 (213)
490 1rw1_A Conserved hypothetical 73.0 2.9 9.8E-05 30.7 3.4 33 64-105 2-34 (114)
491 1qmv_A Human thioredoxin perox 72.8 10 0.00036 30.4 7.1 45 315-359 109-161 (197)
492 2vup_A Glutathione peroxidase- 71.2 11 0.00037 30.0 6.9 91 270-361 48-185 (190)
493 2obi_A PHGPX, GPX-4, phospholi 71.1 9.9 0.00034 30.0 6.6 33 328-360 150-183 (183)
494 1wjk_A C330018D20RIK protein; 71.1 9.4 0.00032 26.9 5.7 79 272-362 17-97 (100)
495 3fz4_A Putative arsenate reduc 70.7 4.5 0.00015 30.0 4.0 35 63-106 4-38 (120)
496 3gkn_A Bacterioferritin comigr 69.8 14 0.00048 28.3 7.1 14 328-341 125-138 (163)
497 3pl5_A SMU_165, putative uncha 69.7 29 0.001 30.5 9.7 105 204-312 46-157 (320)
498 3jr7_A Uncharacterized EGV fam 68.3 28 0.00095 30.3 9.2 105 204-312 31-138 (298)
499 1wwj_A Circadian clock protein 67.7 5.8 0.0002 28.5 3.7 60 61-122 7-66 (105)
500 2h01_A 2-Cys peroxiredoxin; th 67.5 9.2 0.00031 30.5 5.6 29 314-342 105-135 (192)
No 1
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=8.5e-45 Score=337.68 Aligned_cols=312 Identities=15% Similarity=0.221 Sum_probs=264.7
Q ss_pred cCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHH------HHHHHHHHHhhcCCCCeEEEEEeCccchhhhhh
Q 017971 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLA------PQLDEAAPILAKLKEPIVIAKVDADKYSRLASK 112 (363)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~------~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~ 112 (363)
+...+.|+.|++++|+++++++++++|.||||||+||+... |.|+++++.+++. ++.+++|||++++++|++
T Consensus 9 ~~~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~--~v~~~~Vd~~~~~~l~~~ 86 (367)
T 3us3_A 9 YDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK--GVGFGLVDSEKDAAVAKK 86 (367)
T ss_dssp CCCCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTTHHHHHH
T ss_pred CCCCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC--CceEEEEeCcccHHHHHH
Confidence 55667899999999999998899999999999999973332 7999999988643 599999999999999999
Q ss_pred CCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHH-hcCCcccEEEeecCCh-----hHH
Q 017971 113 QEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVE-NAGTFFPLFIGFGLDE-----SVM 186 (363)
Q Consensus 113 ~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~-----~~~ 186 (363)
|+|+++||+++|++|+++.|.|.++.+.|++|+.+++++++..+++..+++++++ +++ +++|+|+... +.+
T Consensus 87 ~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~---~~vv~ff~~~~~~~~~~f 163 (367)
T 3us3_A 87 LGLTEEDSIYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDE---IKLIGYFKNKDSEHYKAF 163 (367)
T ss_dssp HTCCSTTEEEEEETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSS---CEEEEECSCTTCHHHHHH
T ss_pred cCCCcCceEEEEECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCC---cEEEEEECCCCchHHHHH
Confidence 9999999999999999999999999999999999999999999999899999998 343 5788877542 358
Q ss_pred HHHHHHhhhhhHHHHhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-CCHHHHHHHHHhhcCCCcccCChhhHHh
Q 017971 187 SNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLNL 265 (363)
Q Consensus 187 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~-~~~~~l~~fi~~~~~p~~~~lt~~~~~~ 265 (363)
.++|..+++.+.|+. ..++.+++.++++. |++++|++..+.+..|.|. .+.++|.+||..++.|+++++|.+++..
T Consensus 164 ~~~A~~~~~~~~F~~--~~~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~ 240 (367)
T 3us3_A 164 KEAAEEFHPYIPFFA--TFDSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYE 240 (367)
T ss_dssp HHHHHHHTTTSCEEE--ECCHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHH
T ss_pred HHHHHhhcCCcEEEE--ECCHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHH
Confidence 889999988777765 34577899999985 9999999877788899985 8999999999999999999999999877
Q ss_pred hhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC---cEEEEEeccCchhHH----hhcCCCCCCCCCeEEEEeC
Q 017971 266 LKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFA----DTFEANKKSKLPKMVVWDG 336 (363)
Q Consensus 266 l~~~--~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~---~~f~~vd~~~~~~~~----~~~gi~~~~~~P~~vi~~~ 336 (363)
+..+ .++.+++|+ +.......++.+.++++|+++++ +.|+|+|+.+++..+ +.||+ . .+.|+++|++.
T Consensus 241 ~~~~~~~~~~~~~f~-~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl-~-~~~P~~~i~~~ 317 (367)
T 3us3_A 241 TWEDDMDGIHIVAFA-EEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDI-D-LSAPQIGVVNV 317 (367)
T ss_dssp HHHSCBTTEEEEEEC-CTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTC-C-TTSCEEEEEET
T ss_pred HHhhccCCcEEEEEE-cCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCC-C-CCCCeEEEEec
Confidence 6654 235555555 44555678899999999999986 999999999987665 45999 3 57999999998
Q ss_pred C-C--CeeEEE---EEEeehhhhhHhhhhhc
Q 017971 337 N-E--NYLTVS---INVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 337 ~-~--~y~~~~---~~~~~~~~~~~~~~~~~ 361 (363)
. + +||.+. .+++.+.|..|+..+|.
T Consensus 318 ~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~ 348 (367)
T 3us3_A 318 TDADSVWMEMDDEEDLPSAEELEDWLEDVLE 348 (367)
T ss_dssp TTCCEEECCCCTTSCCCCHHHHHHHHHHHHH
T ss_pred ccccceeecCCcccccCCHHHHHHHHHHHHc
Confidence 6 3 355444 47999999999999885
No 2
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=8.2e-44 Score=329.58 Aligned_cols=312 Identities=20% Similarity=0.270 Sum_probs=266.6
Q ss_pred cCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHH-------HHHHHHHhhcCCCCeEEEEEeCccchhhhh
Q 017971 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQ-------LDEAAPILAKLKEPIVIAKVDADKYSRLAS 111 (363)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~-------~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~ 111 (363)
++.++.|+.|++++|++.++++++++|.||||||+ |+++.|. |+++++.+++. ++.+++|||++++++|+
T Consensus 7 ~~~~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~v~~~~Vd~~~~~~l~~ 83 (350)
T 1sji_A 7 YDGKDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--DIGFVMVDAKKEAKLAK 83 (350)
T ss_dssp CCCCCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--SEEEEEEETTTTHHHHH
T ss_pred CCCCCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--CcEEEEEeCCCCHHHHH
Confidence 44567899999999999998899999999999999 9999888 99999988764 59999999999999999
Q ss_pred hCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHH-hcCCcccEEEeecCCh-----hH
Q 017971 112 KQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVE-NAGTFFPLFIGFGLDE-----SV 185 (363)
Q Consensus 112 ~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~-----~~ 185 (363)
+|+|.++||+++|++|+...|.|.++.+.|.+|+.+.+++++..+++.++++++++ .++ +++|+|+... +.
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~---~~vv~ff~~~~~~~~~~ 160 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQ---IKLIGFFKSEESEYYKA 160 (350)
T ss_dssp HHTCCSTTEEEEEETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSS---CEEEEECSCTTSHHHHH
T ss_pred hcCCCccceEEEEECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCC---cEEEEEECCCCcHHHHH
Confidence 99999999999999999888999999999999999999999999998889999987 554 4778877541 35
Q ss_pred HHHHHHHhhhhhHHHHhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-CCHHHHHHHHHhhcCCCcccCChhhHH
Q 017971 186 MSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLN 264 (363)
Q Consensus 186 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~-~~~~~l~~fi~~~~~p~~~~lt~~~~~ 264 (363)
+.++|..+++...|+.. .++++++.++++ .|++++|++.++.+..|.|. .+.++|.+||..++.|.++++|.+++.
T Consensus 161 ~~~~A~~~~~~~~f~~~--~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~ 237 (350)
T 1sji_A 161 FEEAAEHFQPYIKFFAT--FDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMF 237 (350)
T ss_dssp HHHHHHHTTTTSEEEEE--CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHH
T ss_pred HHHHHHhhccCcEEEEE--CCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHH
Confidence 78889888887766653 457789999999 89999999876778889997 899999999999999999999999999
Q ss_pred hhhcCCC-cEEEEEEeCCChhhHHHHHHHHHHHHHhCCC---cEEEEEeccCchhHH----hhcCCCCCCCCCeEEEEeC
Q 017971 265 LLKDDKR-KIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFA----DTFEANKKSKLPKMVVWDG 336 (363)
Q Consensus 265 ~l~~~~~-~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~---~~f~~vd~~~~~~~~----~~~gi~~~~~~P~~vi~~~ 336 (363)
.++.++. +..++++....+....++.+.++++|+++++ +.|+|+|+.+++..+ +.||+ . .+.|+++|++.
T Consensus 238 ~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi-~-~~~P~~~i~~~ 315 (350)
T 1sji_A 238 ETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKI-D-LFKPQIGVVNV 315 (350)
T ss_dssp HHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCS-C-TTSCEEEEEES
T ss_pred HHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCC-C-ccCCcEEEEec
Confidence 9988754 5444445444444467889999999999873 999999999998888 88999 3 46899999998
Q ss_pred C-C-CeeE-E---EEEEeehhhhhHhhhhhc
Q 017971 337 N-E-NYLT-V---SINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 337 ~-~-~y~~-~---~~~~~~~~~~~~~~~~~~ 361 (363)
. + +|+. . +++.+.+.|..|+..+|.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 316 TDADSVWMEIPDDDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp SSSCEEESCSSCCSCCCCHHHHHHHHHHHHT
T ss_pred ccccccccCCCcccccCCHHHHHHHHHHHhc
Confidence 4 4 5542 2 247888999999999885
No 3
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-43 Score=328.54 Aligned_cols=310 Identities=19% Similarity=0.339 Sum_probs=241.2
Q ss_pred CCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcC---CCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKL---KEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~---~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
.+.|+.|++++|+++++++++++|.||||||+||+++.|.|+++++.+++. ...+.++.|||++++++|++|+|.++
T Consensus 4 ~~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~ 83 (382)
T 2r2j_A 4 GSEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKY 83 (382)
T ss_dssp ----CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEE
T ss_pred CCceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcC
Confidence 457899999999999988899999999999999999999999999998643 23499999999999999999999999
Q ss_pred CEEEEEeCCEEE--eecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHH
Q 017971 119 PTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLAL 191 (363)
Q Consensus 119 Pt~~~~~~g~~~--~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~a~ 191 (363)
||+++|++|+.+ .|.|.++.+.|.+|+.+.+++++..+++..++++ +..+. +++++|+.+. ..+..+|.
T Consensus 84 Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~---~~~v~ff~~~~~~~~~~f~~~A~ 159 (382)
T 2r2j_A 84 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSK---RNIIGYFEQKDSDNYRVFERVAN 159 (382)
T ss_dssp SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------C---CEEEEEESCSSSHHHHHHHHHHH
T ss_pred CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCC---CEEEEEECCCCChhHHHHHHHHH
Confidence 999999999876 5999999999999999999999999988777887 54443 5777776432 25888999
Q ss_pred HhhhhhHHHHhhhcchhhhhhcCCCCCCeEEEEcCC--CCCcccccCCC-CHHHHHHHHHhhcCCCcccCChhhHHhhhc
Q 017971 192 KYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPS--YNEHNIFYGPF-DEEFLEEFIKQNFLPLSVPINQDTLNLLKD 268 (363)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~iv~~~~~--~~~~~~~~g~~-~~~~l~~fi~~~~~p~~~~lt~~~~~~l~~ 268 (363)
.+++.+.|++... ++.+.+++++.| ++|++. .+....|.|.+ +.++|.+||..+..|.++++|.+++..++.
T Consensus 160 ~~~~~~~F~~~~~---~~~~~~~v~~~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~ 234 (382)
T 2r2j_A 160 ILHDDCAFLSAFG---DVSKPERYSGDN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTE 234 (382)
T ss_dssp HHTTTCEEEEEES---CC--------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHT
T ss_pred HhhccceEEEEeh---hhHHhhCCCCCc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhc
Confidence 9988776655432 467778888888 455553 23567899999 999999999999999999999999999998
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEE--E
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVS--I 345 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~--~ 345 (363)
.+.+++++++.....+..+.+.+.+.+++.++++ +.|+|+|+.+++.+++.||+ ...++|+++|.+....|..++ +
T Consensus 235 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl-~~~~~P~i~i~~~~~~y~~~~~~~ 313 (382)
T 2r2j_A 235 EGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQK-TPADCPVIAIDSFRHMYVFGDFKD 313 (382)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTC-CGGGCSEEEEECSSCEEECCCSGG
T ss_pred CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCC-CccCCCEEEEEcchhcCCCCcccc
Confidence 8999998888665556667788888888888887 99999999999999999999 456899999998754453332 2
Q ss_pred EEeehhhhhHhhhhhc
Q 017971 346 NVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 346 ~~~~~~~~~~~~~~~~ 361 (363)
..+.+.|..||..+|.
T Consensus 314 ~~~~~~i~~F~~d~~~ 329 (382)
T 2r2j_A 314 VLIPGKLKQFVFDLHS 329 (382)
T ss_dssp GGSTTHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHC
Confidence 2344789999999874
No 4
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=2.2e-41 Score=326.59 Aligned_cols=308 Identities=24% Similarity=0.419 Sum_probs=261.6
Q ss_pred CCeEEcChhhHHHhHcCC---CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 43 GKVIELDESNFDSAISSF---DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~---~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
+.|+.|++++|++.+.++ ++++|.||||||++|+++.|.|+++++.+++. +.++.|||++++++|++|+|.++|
T Consensus 1 s~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~P 77 (481)
T 3f8u_A 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI---VPLAKVDCTANTNTCNKYGVSGYP 77 (481)
T ss_dssp CCCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CCEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc---eEEEEEECCCCHHHHHhcCCCCCC
Confidence 368999999999999777 99999999999999999999999999998764 999999999999999999999999
Q ss_pred EEEEEeCCE-EEeecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHh
Q 017971 120 TLKIFMHGI-PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKY 193 (363)
Q Consensus 120 t~~~~~~g~-~~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~a~~~ 193 (363)
|+++|++|+ ...|.|.++.+.|.+|+.+.++|++..+.+..+++++++.++ +++++|+.+. ..+..+|..+
T Consensus 78 tl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~vv~~~~~~~~~~~~~f~~~a~~~ 154 (481)
T 3f8u_A 78 TLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKD---ASIVGFFDDSFSEAHSEFLKAASNL 154 (481)
T ss_dssp EEEEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSS---CEEEEEESCTTCHHHHHHHHHHHHH
T ss_pred EEEEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCC---cEEEEEECCCccchHHHHHHHHHHh
Confidence 999999996 457999999999999999999999999999999999998765 5777776432 3588889999
Q ss_pred hhhhHHHHhhhcchhhhhhcCCCCCCeEEEEc------CCCCCccccc-CCCCHHHHHHHHHhhcCCCcccCChhhHHhh
Q 017971 194 KKKAWFAVAKDFSEDTMVLYDFDKVPALVALQ------PSYNEHNIFY-GPFDEEFLEEFIKQNFLPLSVPINQDTLNLL 266 (363)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~p~iv~~~------~~~~~~~~~~-g~~~~~~l~~fi~~~~~p~~~~lt~~~~~~l 266 (363)
++.+.|+. ..+.++++.++++..| +++|+ ..++....|. |.++.++|.+||..+++|+++++|.+++..+
T Consensus 155 ~~~~~F~~--~~~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~ 231 (481)
T 3f8u_A 155 RDNYRFAH--TNVESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI 231 (481)
T ss_dssp TTTSCEEE--ECCHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHH
T ss_pred ccCceEEE--ECCHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHh
Confidence 88877764 4567889999998754 88888 3345667888 8889999999999999999999999999998
Q ss_pred hcCCCcEEEEEEeCC---ChhhHHHHHHHHHHHHHhCCC----cEEEEEeccCchhHHhhcCCC-CCCCCCeEEEEeCCC
Q 017971 267 KDDKRKIVLAIVEDE---TEEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEAN-KKSKLPKMVVWDGNE 338 (363)
Q Consensus 267 ~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~~a~~~~~----~~f~~vd~~~~~~~~~~~gi~-~~~~~P~~vi~~~~~ 338 (363)
.. .+.+++++..+ ..+..+.+.+.++++|+++++ +.|+++|+.++...++.||++ ...+.|.++|++.++
T Consensus 232 ~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~~~ 309 (481)
T 3f8u_A 232 QG--KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG 309 (481)
T ss_dssp TT--SSEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECSSS
T ss_pred cC--CCceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcCCC
Confidence 75 45666655432 222234467888999988764 999999999999999999993 134799999999777
Q ss_pred CeeEEEEEEeeh--hhhhHhhhhhc
Q 017971 339 NYLTVSINVLKT--RVCFFMLTLLQ 361 (363)
Q Consensus 339 ~y~~~~~~~~~~--~~~~~~~~~~~ 361 (363)
+.|.++++++.+ .|..|+..++.
T Consensus 310 ~ky~~~~~~t~e~~~l~~f~~~~~~ 334 (481)
T 3f8u_A 310 EKFVMQEEFSRDGKALERFLQDYFD 334 (481)
T ss_dssp CEEECCSCCCTTSHHHHHHHHHHHH
T ss_pred cccCCCcccCccHHHHHHHHHHHhc
Confidence 777777888888 99999998875
No 5
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=5.7e-40 Score=318.38 Aligned_cols=304 Identities=23% Similarity=0.398 Sum_probs=256.3
Q ss_pred cCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
+..++.|+.|++++|++.++++++++|.||||||+||+++.|.|+++++.+++. ++.++.|||++++++|++|+|.++
T Consensus 10 ~~~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~ 87 (504)
T 2b5e_A 10 APEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTENQDLCMEHNIPGF 87 (504)
T ss_dssp CCTTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCCCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHhcCCCcC
Confidence 445678999999999999998999999999999999999999999999988753 499999999999999999999999
Q ss_pred CEEEEEeCCE---EEeecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCC--h---hHHHHHH
Q 017971 119 PTLKIFMHGI---PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD--E---SVMSNLA 190 (363)
Q Consensus 119 Pt~~~~~~g~---~~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~---~~~~~~a 190 (363)
||+++|++|+ ...|.|.++.+.|.+|+.+.+++++..+++ ++++++.++.. +.+++|+.+ + ..+..+|
T Consensus 88 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~-~~~v~~f~~~~~~~~~~f~~~A 163 (504)
T 2b5e_A 88 PSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFV-TPVIVQSGKIDADFNATFYSMA 163 (504)
T ss_dssp SEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCS-SCEEEEEESCCHHHHHHHHHHH
T ss_pred CEEEEEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCc-eEEEEEeCCCCchHHHHHHHHH
Confidence 9999999997 667999999999999999999999999988 88898876522 244444432 2 3588889
Q ss_pred HHhhhhhHHHHhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-C---CHHHHHHHHHhhcCCCcccCChhhHHhh
Q 017971 191 LKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-F---DEEFLEEFIKQNFLPLSVPINQDTLNLL 266 (363)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~-~---~~~~l~~fi~~~~~p~~~~lt~~~~~~l 266 (363)
..+++...|+... ++.+.++++ ++++++.+ ....|.|. + +.++|.+||..+.+|.++++|.+++..+
T Consensus 164 ~~~~~~~~F~~~~----~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~ 234 (504)
T 2b5e_A 164 NKHFNDYDFVSAE----NADDDFKLS----IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQY 234 (504)
T ss_dssp HHTTTTCEEEEEE----CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHH
T ss_pred HHhhcCcEEEEEH----HHHHhcCCe----EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHH
Confidence 9998877776432 456666654 67776643 66778888 6 9999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCC-CCeeEEE
Q 017971 267 KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGN-ENYLTVS 344 (363)
Q Consensus 267 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~-~~y~~~~ 344 (363)
+..+.++++++++. .+..+.+.+.++++|+++++ +.|+|+|+.+++.+++.||+ ..+.|+++|++.. +++|...
T Consensus 235 ~~~~~~~~~l~~~~--~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~~~~~~~~~gl--~~~~P~v~i~~~~~~~ky~~~ 310 (504)
T 2b5e_A 235 VESGLPLGYLFYND--EEELEEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNM--KEQFPLFAIHDMTEDLKYGLP 310 (504)
T ss_dssp HHTTSCEEEEEESS--HHHHHHHHHHHHHHHHHTTTTCEEEEEEHHHHTTHHHHTTC--CSCSSEEEEEETTTTEEEECC
T ss_pred hcCCCcEEEEEecC--cccHHHHHHHHHHHHHhcCCeeEEEEEehhhhHHHHHHcCC--cccCCEEEEEeCCcCcccCCC
Confidence 99999998888744 33347889999999999998 99999999999999999999 3689999999984 5455554
Q ss_pred --EE-----------EeehhhhhHhhhhhc
Q 017971 345 --IN-----------VLKTRVCFFMLTLLQ 361 (363)
Q Consensus 345 --~~-----------~~~~~~~~~~~~~~~ 361 (363)
++ .+.+.+..|+..++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~ 340 (504)
T 2b5e_A 311 QLSEEAFDELSDKIVLESKAIESLVKDFLK 340 (504)
T ss_dssp CCCHHHHHTCCSCCCCCHHHHHHHHHHHHH
T ss_pred CCccchhhccccccccCHHHHHHHHHHHHc
Confidence 44 667889999988764
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=6e-34 Score=289.88 Aligned_cols=311 Identities=18% Similarity=0.223 Sum_probs=249.5
Q ss_pred cccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcC
Q 017971 37 TKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (363)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 116 (363)
+.+..++.|+.|+.++|++.++++++++|.||||||++|+++.|.|+++++.+++. +.+++|||++++++|++|+|.
T Consensus 110 g~~~~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~~~~l~~~~~v~ 186 (780)
T 3apo_A 110 GIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGL---LRIGAVNCGDDRMLCRMKGVN 186 (780)
T ss_dssp STTTTCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTCSSCC------
T ss_pred cccCCCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCc---eEEEEEeCCCcHHHHHHcCCc
Confidence 45677889999999999999988999999999999999999999999999988653 999999999999999999999
Q ss_pred cCCEEEEEeCCEE-EeecCCCCHHHHHHHHHhhcCCCceecCCh---HHHHHHHHhcCCcccEEEeecCCh------hHH
Q 017971 117 AFPTLKIFMHGIP-TEYYGPRKAELLVRYLKKFVAPDVSILNSD---AEVSDFVENAGTFFPLFIGFGLDE------SVM 186 (363)
Q Consensus 117 ~~Pt~~~~~~g~~-~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~---~~~~~~~~~~~~~~~~~v~~~~~~------~~~ 186 (363)
++||+++|++|+. .+|.|.++.+.|.+|+.+.+++.+..+++. +++++++..+. +++++|++.. ..+
T Consensus 187 ~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~---~~vi~f~~~~~~~~~~~~~ 263 (780)
T 3apo_A 187 SYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGV---GWLITFCSKGEDCLTSQTR 263 (780)
T ss_dssp --CEEEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTC---EEEEEEECTTSCCCCHHHH
T ss_pred eeeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCC---CEEEEEecCcccccCHHHH
Confidence 9999999999984 679999999999999999999999999887 67888886643 5777776432 234
Q ss_pred HHHHHHhhhhhH--------------------------------------------------------------------
Q 017971 187 SNLALKYKKKAW-------------------------------------------------------------------- 198 (363)
Q Consensus 187 ~~~a~~~~~~~~-------------------------------------------------------------------- 198 (363)
..++..+++.+.
T Consensus 264 ~~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~ 343 (780)
T 3apo_A 264 LRLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSAN 343 (780)
T ss_dssp HHHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHH
T ss_pred HHHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHH
Confidence 445544421110
Q ss_pred -----------------------------------------HHHh-hhcchhhhhhcCCCCCCeEEEEcCCC-CCccccc
Q 017971 199 -----------------------------------------FAVA-KDFSEDTMVLYDFDKVPALVALQPSY-NEHNIFY 235 (363)
Q Consensus 199 -----------------------------------------~~~~-~~~~~~~~~~~~~~~~p~iv~~~~~~-~~~~~~~ 235 (363)
|+.+ ...+..+++.+++.. |++++++..+ +....|.
T Consensus 344 ~f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~-p~i~l~~~~~~e~~~~~~ 422 (780)
T 3apo_A 344 QLEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQ-PSLAVFKGQGTKEYEIHH 422 (780)
T ss_dssp HHHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCS-CEEEEEESSTTSSEEECC
T ss_pred HHHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccC-ChhhhccCCCcceeeecc
Confidence 0000 012345677888876 9999998765 4467788
Q ss_pred CCCCHHHHHHHHHhhcCCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCch
Q 017971 236 GPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFA 314 (363)
Q Consensus 236 g~~~~~~l~~fi~~~~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~ 314 (363)
|..+.++|.+|+..+..|.+.++|.+++..+ .++++++.|+.+ -....+.+...+.++|+++++ +.|+.||+++++
T Consensus 423 g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~-wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~ 499 (780)
T 3apo_A 423 GKKILYDILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAP-WSPPSRALLPELRKASTLLYGQLKVGTLDCTIHE 499 (780)
T ss_dssp SCCCHHHHHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred cHhhHHHHHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECC-CCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCH
Confidence 9999999999999999999999999999888 567888888754 345667889999999999976 999999999999
Q ss_pred hHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 315 DFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 315 ~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.+++.||+ ...|++++++. |+.+...+....+.+..|+..+|.
T Consensus 500 ~~~~~~~v---~~~Pt~~~~~~-g~~~~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 500 GLCNMYNI---QAYPTTVVFNQ-SSIHEYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp HHHHHTTC---CSSSEEEEEET-TEEEEECSCSCHHHHHHHHHHHHS
T ss_pred HHHHHcCC---CcCCeEEEEcC-CceeeecCcccHHHHHHHHHhhcc
Confidence 99999999 45999999965 555778888899999999998874
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.9e-31 Score=271.54 Aligned_cols=309 Identities=16% Similarity=0.206 Sum_probs=257.5
Q ss_pred CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
+.|.++++++|++. .+++++|.||++||++|+++.|.|+++++.+++ ++.|+.|||++++.+|+.|+|.++|+++
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 514 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG---QLKVGTLDCTIHEGLCNMYNIQAYPTTV 514 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEeCCCCHHHHHHcCCCcCCeEE
Confidence 45899999999887 778999999999999999999999999998864 4999999999999999999999999999
Q ss_pred EEeCCEEEeecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHHhh
Q 017971 123 IFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALKYK 194 (363)
Q Consensus 123 ~~~~g~~~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~a~~~~ 194 (363)
+|++|+...|.|.++.+.|.+|+.+.+.+++..++. .++++++...+...++++.|+..+ +.+.++|..++
T Consensus 515 ~~~~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~~-~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~ 593 (780)
T 3apo_A 515 VFNQSSIHEYEGHHSAEQILEFIEDLRNPSVVSLTP-STFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLT 593 (780)
T ss_dssp EEETTEEEEECSCSCHHHHHHHHHHHHSCSEEECCH-HHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCceeeecCcccHHHHHHHHHhhcccceeecCc-ccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh
Confidence 999998888999999999999999999999999975 679999876543446778777542 35777888887
Q ss_pred hhhHHHHh-hhcchhhhhhcCCCCCCeEEEEcCCCC---CcccccC-CCCHHHHHHHHHhhcCCCcccCChhhHHh-hhc
Q 017971 195 KKAWFAVA-KDFSEDTMVLYDFDKVPALVALQPSYN---EHNIFYG-PFDEEFLEEFIKQNFLPLSVPINQDTLNL-LKD 268 (363)
Q Consensus 195 ~~~~~~~~-~~~~~~~~~~~~~~~~p~iv~~~~~~~---~~~~~~g-~~~~~~l~~fi~~~~~p~~~~lt~~~~~~-l~~ 268 (363)
+...|+.+ .+.+..++..++++++|++++|+.+.. .+..|.| ..+.++|.+||.+...|.+.+++.+++.. +..
T Consensus 594 ~~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~~ 673 (780)
T 3apo_A 594 GLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVLQ 673 (780)
T ss_dssp TTSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTTT
T ss_pred CCeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHhc
Confidence 75544433 234566788999999999999987543 3566889 88999999999999999999999999965 666
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEE--
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSI-- 345 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~-- 345 (363)
.++++++.|+. .-....+.+...+.++|+++++ +.|+.+|+++++.+++.+|+ ...|++++++..+......+
T Consensus 674 ~~~~v~v~F~a-~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~~G~~ 749 (780)
T 3apo_A 674 GKTHWVVDFYA-PWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSVKLYQYERAKKSIWEEQ 749 (780)
T ss_dssp CSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCC---CcCCEEEEEcCCCccccccCcc
Confidence 77788877764 3566678889999999999876 99999999999999999999 67999999954443334444
Q ss_pred --EEeehhhhhHhhhhhc
Q 017971 346 --NVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 346 --~~~~~~~~~~~~~~~~ 361 (363)
....+.+..|+...|+
T Consensus 750 ~g~~~~~~l~~~l~~~l~ 767 (780)
T 3apo_A 750 INSRDAKTIAALIYGKLE 767 (780)
T ss_dssp ECCCCHHHHHHHHHHHTT
T ss_pred cCCcCHHHHHHHHHHHHH
Confidence 4678899999988875
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.1e-31 Score=236.58 Aligned_cols=215 Identities=24% Similarity=0.405 Sum_probs=183.0
Q ss_pred CCCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhCCcC
Q 017971 40 KIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQEID 116 (363)
Q Consensus 40 ~~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~~i~ 116 (363)
..++.|++|++++|++.+ +.+++++|.|||+||++|+++.|.|+++++.+.+. +.++.|||+ +++++|++|+|.
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~---~~~~~v~~d~~~~~~l~~~~~I~ 90 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV---VQVAAVNCDLNKNKALCAKYDVN 90 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC---cEEEEEEccCccCHHHHHhCCCC
Confidence 356789999999999999 56789999999999999999999999999988653 899999998 789999999999
Q ss_pred cCCEEEEEeCCE------------------EEeecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEe
Q 017971 117 AFPTLKIFMHGI------------------PTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIG 178 (363)
Q Consensus 117 ~~Pt~~~~~~g~------------------~~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~ 178 (363)
++||+++|++|+ ...|.|.++.+.|++|+.+.+++.+..+++..+++++++.++. +.+++
T Consensus 91 ~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~--~~vi~ 168 (298)
T 3ed3_A 91 GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPK--LSVVL 168 (298)
T ss_dssp BSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSS--EEEEE
T ss_pred ccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCc--eEEEE
Confidence 999999999885 5679999999999999999999999999998899999987643 56666
Q ss_pred ecCC---hhHHHHHHHHhhhhhHHHHhhhcchhhhhhc-----C-----C-------------CCCCeEEEEcCCCCCcc
Q 017971 179 FGLD---ESVMSNLALKYKKKAWFAVAKDFSEDTMVLY-----D-----F-------------DKVPALVALQPSYNEHN 232 (363)
Q Consensus 179 ~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-----~-----~-------------~~~p~iv~~~~~~~~~~ 232 (363)
|..+ ...++.+|..+++.+.|+.+. +.+++..+ + + ...|++++|+...+.+.
T Consensus 169 fs~~~~~~~~f~~~A~~~~~~~~F~~v~--~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 169 FSKQDKISPVYKSIALDWLGKFDFYSIS--NKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp EESSSSCCHHHHHHHHHTBTTEEEEEEE--GGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred EcCCCcchHHHHHHHHHhhcCcEEEEEc--chHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 6533 357999999999988877653 23333222 2 2 56899999998888899
Q ss_pred cccC-CCCHHHHHHHHH--hhcCCCcccCChh
Q 017971 233 IFYG-PFDEEFLEEFIK--QNFLPLSVPINQD 261 (363)
Q Consensus 233 ~~~g-~~~~~~l~~fi~--~~~~p~~~~lt~~ 261 (363)
.|.| .++.++|.+||. .+..|.++++|..
T Consensus 247 ~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~ 278 (298)
T 3ed3_A 247 EYEGNSINKNDISKFLRDTFSITPNEGPFSRR 278 (298)
T ss_dssp ECCCSSCCHHHHHHHHHHHHTCCCSSSTTSHH
T ss_pred EeccccCCHHHHHHHHHhhcCCCCCcCCCchH
Confidence 9995 689999999999 7789999999973
No 9
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.96 E-value=2.4e-28 Score=213.85 Aligned_cols=210 Identities=28% Similarity=0.507 Sum_probs=176.1
Q ss_pred cCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
...++.|+.|++++|++.+.++++++|.||++||++|+++.|.|.++++.+++.+.++.++.|||++++++|++|+|.++
T Consensus 11 ~~~~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 90 (241)
T 3idv_A 11 VKEENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY 90 (241)
T ss_dssp CEEETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS
T ss_pred cccCCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC
Confidence 34467899999999999999999999999999999999999999999999987766799999999999999999999999
Q ss_pred CEEEEEeCCEEEeecCCCCHHHHHHHHHhhcCCC-------ceecCChHHHHHHHHhcCCcccEEEeecCCh--------
Q 017971 119 PTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPD-------VSILNSDAEVSDFVENAGTFFPLFIGFGLDE-------- 183 (363)
Q Consensus 119 Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~~~~-------v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-------- 183 (363)
||+++|++|+.+.|.|.++.+.|.+|+.+...+. +..+ +..++++++..++ ++++.|+..+
T Consensus 91 Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~v~f~a~wC~~C~~~~ 166 (241)
T 3idv_A 91 PTIKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVL-TKENFDEVVNDAD---IILVEFYAPWCGHCKKLA 166 (241)
T ss_dssp SEEEEEETTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEEC-CTTTHHHHHHHCS---EEEEEEECTTCTGGGGTH
T ss_pred CEEEEEcCCCcccccCcccHHHHHHHHhhccCcccccccccceec-cHHHHHHhhccCC---eEEEEEECCCCHHHHHhH
Confidence 9999999999999999999999999999987653 3444 4467999987765 5777776432
Q ss_pred hHHHHHHHHhhhh---hHHH-HhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCCHHHHHHHHHhhcCCC
Q 017971 184 SVMSNLALKYKKK---AWFA-VAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPL 254 (363)
Q Consensus 184 ~~~~~~a~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p~ 254 (363)
+.+..++..+.+. ..+. +..+.+.+++..|++.++|++++|++ +....|.|..+.++|.+||+++..|.
T Consensus 167 p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~--g~~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 167 PEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRK--GRPYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEET--TEEEECCSCCSHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEEC--CeEEEecCCCCHHHHHHHHHhhhCCC
Confidence 4577777777653 2332 22345678999999999999999986 45566899999999999999987664
No 10
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.93 E-value=4.7e-25 Score=193.43 Aligned_cols=211 Identities=16% Similarity=0.240 Sum_probs=157.8
Q ss_pred ccccCCCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC--ccchhhhhh
Q 017971 36 ETKFKIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASK 112 (363)
Q Consensus 36 ~~~~~~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~--~~~~~l~~~ 112 (363)
.+.++..+.|..|++++|++.+ +.+++++|.|||+||++|+++.|.|+++++.+.+....+.|+.||| ++++++|++
T Consensus 5 ~~l~~~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~ 84 (244)
T 3q6o_A 5 SALYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRD 84 (244)
T ss_dssp -CCSCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHH
T ss_pred cCCCCCCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHH
Confidence 3446667899999999999987 5558999999999999999999999999999987555699999999 678999999
Q ss_pred CCcCcCCEEEEEeCC------EEEeecCCCCHHHHHHHHHhhcCCCce---------ecCChHHHHHHHHhcCCcccEEE
Q 017971 113 QEIDAFPTLKIFMHG------IPTEYYGPRKAELLVRYLKKFVAPDVS---------ILNSDAEVSDFVENAGTFFPLFI 177 (363)
Q Consensus 113 ~~i~~~Pt~~~~~~g------~~~~y~g~~~~~~i~~~i~~~~~~~v~---------~i~~~~~~~~~~~~~~~~~~~~v 177 (363)
|+|.++||+++|.+| ..+.+.| ++.+.|.+++.+.+..... ...+..++++++..+... +..+
T Consensus 85 ~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~-~~al 162 (244)
T 3q6o_A 85 FNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEE-YLAL 162 (244)
T ss_dssp TTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCS-EEEE
T ss_pred cCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCc-eEEE
Confidence 999999999999873 4445666 7999999999888753321 233457799998776543 3444
Q ss_pred eecC-ChhHHHHHHHHhhhh--hHHHHhhhcchhhhhhcCCCCCCeEEEEcCCCCCccccc-CCCCHHHHHHHHHh
Q 017971 178 GFGL-DESVMSNLALKYKKK--AWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFY-GPFDEEFLEEFIKQ 249 (363)
Q Consensus 178 ~~~~-~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~-g~~~~~~l~~fi~~ 249 (363)
.|.+ +....++++..+... ..+..+.+....+++.|+++++|+++++.++ +....+. ..-+.+.+..++++
T Consensus 163 ~f~~~~~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~-g~~~~~~~~~~~r~~~~~~l~~ 237 (244)
T 3q6o_A 163 IFEXGGSYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRN-GSVSRVPVLMESRSFYTAYLQR 237 (244)
T ss_dssp EEECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETT-SCEEECCCSSSSHHHHHHHHHT
T ss_pred EEEECCcchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCC-CCeEeeccccccHHHHHHHHHh
Confidence 4443 334566666666643 2233333445889999999999999999864 4444444 33356666666654
No 11
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.89 E-value=9.5e-23 Score=160.21 Aligned_cols=111 Identities=23% Similarity=0.413 Sum_probs=98.0
Q ss_pred ccCCCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhc--CCCCeEEEEEeCccchhhhhhCC
Q 017971 38 KFKIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAK--LKEPIVIAKVDADKYSRLASKQE 114 (363)
Q Consensus 38 ~~~~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~--~~~~v~~~~vd~~~~~~l~~~~~ 114 (363)
.+...+.|.+|++++|++.+ +++++++|.||++||++|+++.|.|+++++.+.. ...++.++.|||++++++|++|+
T Consensus 10 ~~~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~ 89 (127)
T 3h79_A 10 DGERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMR 89 (127)
T ss_dssp ---CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTT
T ss_pred CcCCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcC
Confidence 34567889999999999998 4689999999999999999999999999988753 23569999999999999999999
Q ss_pred cCcCCEEEEEeCCEE---EeecCCCCHHHHHHHHHhh
Q 017971 115 IDAFPTLKIFMHGIP---TEYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 115 i~~~Pt~~~~~~g~~---~~y~g~~~~~~i~~~i~~~ 148 (363)
|.++||+++|++|.. ..|.|.++.+.|.+|+.++
T Consensus 90 v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999999998754 5799999999999999875
No 12
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.89 E-value=2.2e-22 Score=193.42 Aligned_cols=210 Identities=16% Similarity=0.212 Sum_probs=158.3
Q ss_pred cccCCCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhC
Q 017971 37 TKFKIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQ 113 (363)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~ 113 (363)
+.+++.+.|.++++++|++.+ +++++++|.|||+||++|+++.|.|+++++.+++.+..+.|+.|||+ +++++|++|
T Consensus 6 ~Ly~~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~ 85 (519)
T 3t58_A 6 VLYSSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREF 85 (519)
T ss_dssp CSCCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHT
T ss_pred ccCCCCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHc
Confidence 445667889999999999987 56689999999999999999999999999999875556999999995 489999999
Q ss_pred CcCcCCEEEEEeCC----EE-EeecCCCCHHHHHHHHHhhcCCC----------ceecCChHHHHHHHHhcCCcccEEEe
Q 017971 114 EIDAFPTLKIFMHG----IP-TEYYGPRKAELLVRYLKKFVAPD----------VSILNSDAEVSDFVENAGTFFPLFIG 178 (363)
Q Consensus 114 ~i~~~Pt~~~~~~g----~~-~~y~g~~~~~~i~~~i~~~~~~~----------v~~i~~~~~~~~~~~~~~~~~~~~v~ 178 (363)
+|.++||+++|.+| +. ..+.|.++.+.|.+++.+.+... +..+ +..++++++..+... ++++.
T Consensus 86 ~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~i-t~~~l~~~l~~~~~~-~vall 163 (519)
T 3t58_A 86 NIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPA-KLNDIDGFFTRNKAD-YLALV 163 (519)
T ss_dssp TCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBC-CHHHHTTGGGSCCCS-EEEEE
T ss_pred CCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcC-CHHHHHHHhccCCCC-eEEEE
Confidence 99999999999853 33 34778899999999999887533 2333 446788888776543 45555
Q ss_pred ecCCh-hHHHHHHHHhhhh--hHHHHhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCCC-CHHHHHHHHHh
Q 017971 179 FGLDE-SVMSNLALKYKKK--AWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPF-DEEFLEEFIKQ 249 (363)
Q Consensus 179 ~~~~~-~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~~-~~~~l~~fi~~ 249 (363)
|.+.. ...++++..+... ..+..+.+.+..++++||++++|+++++.+++ ....+.... ....+..++++
T Consensus 164 F~~~~s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nG-k~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 164 FEREDSYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNG-SVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp EECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTS-CEEECCCSSCSHHHHHHHHTT
T ss_pred ecCCchHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCC-ceeecccccccHHHHHHHHHH
Confidence 65443 3567777777653 33333345557899999999999999998743 322222222 34556677665
No 13
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.89 E-value=9.9e-22 Score=172.65 Aligned_cols=206 Identities=13% Similarity=0.165 Sum_probs=169.3
Q ss_pred hcCCCceecCChHHHHHHHHh-cCCcccEEEeecCCh-----hHHHHHHHHhhhhhHHHHhhhcchhhhhhcCCCCCCeE
Q 017971 148 FVAPDVSILNSDAEVSDFVEN-AGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 221 (363)
Q Consensus 148 ~~~~~v~~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 221 (363)
..+|++.+|++.++++++++. ++ +++|+|+.+. +.+.++|..+++.+.|+. +.++++++.++++. |++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~---v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~--t~~~~v~~~~~v~~-p~i 76 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDD---VVILGVFQGVGDPGYLQYQDAANTLREDYKFHH--TFSTEIAKFLKVSL-GKL 76 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSS---CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEE--ECCHHHHHHHTCCS-SEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCC---eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEE--ECcHHHHHHcCCCC-CeE
Confidence 468999999999999999987 65 6889988542 358889999999888775 45678888999986 999
Q ss_pred EEEcCC------CCCccccc--CCCCHHHHHHHHHhhcCCCcccCChhhHHhhhcCCCcEEEEEEeCC-C---hhhHHHH
Q 017971 222 VALQPS------YNEHNIFY--GPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDE-T---EEKSQKL 289 (363)
Q Consensus 222 v~~~~~------~~~~~~~~--g~~~~~~l~~fi~~~~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~-~---~~~~~~~ 289 (363)
++|++. ++....|. |.++.++|.+||..+++|+++++|.+|+..+.. +.+.+++++..+ . .+..+.+
T Consensus 77 vlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~ 155 (250)
T 3ec3_A 77 VLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFW 155 (250)
T ss_dssp EEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHH
T ss_pred EEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHH
Confidence 999963 35567888 478999999999999999999999999998774 678887777422 1 4556778
Q ss_pred HHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCC-CeEEEEeCCCCeeEEE-EEEeehhhhhHhhhhhc
Q 017971 290 VTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL-PKMVVWDGNENYLTVS-INVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 290 ~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~-P~~vi~~~~~~y~~~~-~~~~~~~~~~~~~~~~~ 361 (363)
++.++++|++++.+.|+|+|+.++...++.||+ ...+. |.+++++.+++.|.+. .+++.+.|..||..||.
T Consensus 156 ~~~~~~vAk~~kki~F~~~d~~~~~~~l~~fgl-~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 156 RNKVLEVAKDFPEYTFAIADEEDYATEVKDLGL-SESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFKK 228 (250)
T ss_dssp HHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC-SSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcceeEEEEcHHHHHHHHHHcCC-CccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999 44443 6889998777666655 78899999999999985
No 14
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.88 E-value=7e-22 Score=173.93 Aligned_cols=207 Identities=15% Similarity=0.257 Sum_probs=166.0
Q ss_pred hhcCCCceecCChHHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHHHHhhhcchhhhhhcCCCCCCeE
Q 017971 147 KFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 221 (363)
Q Consensus 147 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 221 (363)
++++|++.+|++.++++++++.++ +++|+|+.+. +.+.++|..+++.+.|+.. .++++++.++++. |++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~---v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~--~~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKD---ASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT--NVESLVNEYDDNG-EGI 75 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSS---CEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEE--CCHHHHHHHCSSS-EEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCC---eEEEEEECCCCChHHHHHHHHHHhcccCcEEEEE--ChHHHHHHhCCCC-CcE
Confidence 467899999999999999998765 5888888542 3588899999988877754 4677899999996 999
Q ss_pred EEEcCC------CCCcccc-cCCCCHHHHHHHHHhhcCCCcccCChhhHHhhhcCCCcEEEEEEeCCC---hhhHHHHHH
Q 017971 222 VALQPS------YNEHNIF-YGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDET---EEKSQKLVT 291 (363)
Q Consensus 222 v~~~~~------~~~~~~~-~g~~~~~~l~~fi~~~~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~---~~~~~~~~~ 291 (363)
++|++. ++....| .|.++.++|.+||..+++|+++++|.+++..+.. .+.+++++..+. .+..+.+.+
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~ 153 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQG--KDLLIAYYDVDYEKNAKGSNYWRN 153 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSS--SSEEEEEECCBTTTBHHHHHHHHH
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcC--CCeEEEEeecchhhcchhHHHHHH
Confidence 999862 3456788 8999999999999999999999999999998854 466666654322 233557889
Q ss_pred HHHHHHHhCCC----cEEEEEeccCchhHHhhcCCC-CCCCCCeEEEEeCCCCeeEEEEEEeehh--hhhHhhhhhc
Q 017971 292 TLKAAASANRE----LVFCYVGIKQFADFADTFEAN-KKSKLPKMVVWDGNENYLTVSINVLKTR--VCFFMLTLLQ 361 (363)
Q Consensus 292 ~l~~~a~~~~~----~~f~~vd~~~~~~~~~~~gi~-~~~~~P~~vi~~~~~~y~~~~~~~~~~~--~~~~~~~~~~ 361 (363)
.++++|+++++ +.|+|+|+.++...++.||+. ...++|.++|++.++++|.++.+++.+. |..||..++.
T Consensus 154 ~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 154 RVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHHC
Confidence 99999998763 999999999999999999992 1358999999988776776777888888 9999999884
No 15
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.88 E-value=6.8e-22 Score=157.93 Aligned_cols=120 Identities=38% Similarity=0.699 Sum_probs=109.0
Q ss_pred cccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcC
Q 017971 37 TKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (363)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 116 (363)
.....++.+..+++++|++.+.++++++|.||++||++|+++.|.|.++++.+.+.+.++.++.|||++++++|++|+|.
T Consensus 11 ~~~~~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~ 90 (140)
T 2dj1_A 11 LEVKEENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVS 90 (140)
T ss_dssp SCCEEETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCC
T ss_pred cccCCCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCC
Confidence 34445678999999999999988899999999999999999999999999998876567999999999999999999999
Q ss_pred cCCEEEEEeCCEEEeecCCCCHHHHHHHHHhhcCCCceec
Q 017971 117 AFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSIL 156 (363)
Q Consensus 117 ~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~~~~v~~i 156 (363)
++|++++|++|+...|.|.++.+.|.+|+.+.+.+++...
T Consensus 91 ~~Pt~~~~~~G~~~~~~g~~~~~~l~~~l~~~~~~~~~~~ 130 (140)
T 2dj1_A 91 GYPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTPP 130 (140)
T ss_dssp SSSEEEEEETTEEEECCSCCCHHHHHHHHHHHHSSSCCCC
T ss_pred ccCeEEEEECCcEEEcCCCCCHHHHHHHHHHhcCCCCCCC
Confidence 9999999999996679999999999999999998766543
No 16
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.88 E-value=7.8e-22 Score=170.85 Aligned_cols=203 Identities=18% Similarity=0.250 Sum_probs=167.3
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHHHHhhhcchhhhhhcCCCCCCeEEEEc
Q 017971 151 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQ 225 (363)
Q Consensus 151 ~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~iv~~~ 225 (363)
..+++|++..+++++++.++ +++|+|+.+. +.+.++|..+. .+.|+. +.++++++.++++. |++++|+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~---v~vVgff~~~~~~~~~~f~~~A~~l~-~~~F~~--t~~~~v~~~~~v~~-p~i~lfk 81 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATE---VAVIGFFQDLEIPAVPILHSMVQKFP-GVSFGI--STDSEVLTHYNITG-NTICLFR 81 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSS---EEEEEECSCSCSTHHHHHHHHTTTCT-TSEEEE--ECCHHHHHHTTCCS-SEEEEEE
T ss_pred CCCeeeCCHHHHHHHHhcCC---eEEEEEecCCCchhHHHHHHHHHhCC-CceEEE--ECCHHHHHHcCCCC-CeEEEEE
Confidence 35778889899999998765 6889988542 45888888884 455543 55788999999987 9999999
Q ss_pred CCCCCcccccC----CCCHHHHHHHHHhhcCCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC
Q 017971 226 PSYNEHNIFYG----PFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR 301 (363)
Q Consensus 226 ~~~~~~~~~~g----~~~~~~l~~fi~~~~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~ 301 (363)
+.++.+..|.| .++.++|.+||+.++.|+++++|.+|+..+...+.|.+++++.+......+++.+.++++|++++
T Consensus 82 ~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k 161 (227)
T 4f9z_D 82 LVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQ 161 (227)
T ss_dssp TTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTT
T ss_pred ecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhh
Confidence 76666667774 78999999999999999999999999999998888888776655445567788999999999999
Q ss_pred C-cEEEEEecc--CchhHHhhcCCCCCCCCCeEEEEeCC-CCeeEE-EEEEeehhhhhHhhhhhc
Q 017971 302 E-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGN-ENYLTV-SINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 302 ~-~~f~~vd~~--~~~~~~~~~gi~~~~~~P~~vi~~~~-~~y~~~-~~~~~~~~~~~~~~~~~~ 361 (363)
+ +.|+|+|+. ++...++.||+ ...++|+++|++.. +++|.+ .++++.+.|..||..+|.
T Consensus 162 ~~i~F~~vd~~~~~~~~~l~~fgl-~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 162 GKILFILVDSGMKENGKVISFFKL-KESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp TTCEEEEEETTSGGGHHHHHHTTC-CGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCccHhHHHHHHHcCC-CcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhC
Confidence 8 999999996 47789999999 45689999999976 445554 478999999999999985
No 17
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.87 E-value=2.3e-21 Score=146.59 Aligned_cols=99 Identities=29% Similarity=0.643 Sum_probs=87.1
Q ss_pred eEEc-ChhhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 45 VIEL-DESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 45 v~~l-~~~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
|.++ |.++|++.+. ++++++|.|||+||++|+.+.|.|+++++.+. ++.|+.||+++++++|++|+|.++||+
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~d~~~~l~~~~~V~~~PT~ 77 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS----DVVFLKVDVDECEDIAQDNQIACMPTF 77 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEETTTCHHHHHHTTCCBSSEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC----CeEEEEEecccCHHHHHHcCCCeecEE
Confidence 4555 4578999884 36799999999999999999999999998764 389999999999999999999999999
Q ss_pred EEEeCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 122 KIFMHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
++|++|+.+. +.| .+.+.|.+|+.++
T Consensus 78 ~~~~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 78 LFMKNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 9999999875 677 6899999999875
No 18
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.87 E-value=1.2e-19 Score=168.18 Aligned_cols=296 Identities=14% Similarity=0.175 Sum_probs=226.7
Q ss_pred CCCeEEc-ChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 42 DGKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 42 ~~~v~~l-~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
...+..+ +.++++++++.++.++|.|+.+-+..+ ...|.++|+.+. ++.|+.+ .++++|+++++.. |+
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~~----~~~F~~t---~~~~v~~~~~v~~-~~ 84 (361)
T 3uem_A 16 SEFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAID----DIPFGIT---SNSDVFSKYQLDK-DG 84 (361)
T ss_dssp CSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHCS----SSCEEEE---CCHHHHHHTTCSS-SE
T ss_pred cccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcCC----CceEEEE---CcHHHHHHhCCCC-Ce
Confidence 3456777 558899999988999999998776544 578999998773 2777744 5789999999998 99
Q ss_pred EEEEeC--CEEEeecCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCC-h-------hHHHHHH
Q 017971 121 LKIFMH--GIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E-------SVMSNLA 190 (363)
Q Consensus 121 ~~~~~~--g~~~~y~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~-~-------~~~~~~a 190 (363)
+.+|+. +..+.|.|..+.+.|.+|+.....|.+.+++.+ ++..+...... ++++.|+.. . +.++++|
T Consensus 85 i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~-~~~~~~~~~~~--~~~v~F~~~~~~~~~~~~~~~~~~A 161 (361)
T 3uem_A 85 VVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQ-TAPKIFGGEIK--THILLFLPKSVSDYDGKLSNFKTAA 161 (361)
T ss_dssp EEEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTT-THHHHHSCSCC--EEEEEECCSSSSSHHHHHHHHHHHH
T ss_pred EEEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCcc-cHHHHhcCCCC--cEEEEEEeCCchhHHHHHHHHHHHH
Confidence 999987 667889999999999999999999999999875 47777765543 455655532 1 3477888
Q ss_pred HHhhhhhHHHHhh-h--cchhhhhhcCCCC--CCeEEEEcCCCCCccccc---CCCCHHHHHHHHHhhcC----------
Q 017971 191 LKYKKKAWFAVAK-D--FSEDTMVLYDFDK--VPALVALQPSYNEHNIFY---GPFDEEFLEEFIKQNFL---------- 252 (363)
Q Consensus 191 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~--~p~iv~~~~~~~~~~~~~---g~~~~~~l~~fi~~~~~---------- 252 (363)
..+++...|..+. + ....+++.||+.. .|+++++..+. ....|. |..+.+.|.+|+++...
T Consensus 162 ~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~ 240 (361)
T 3uem_A 162 ESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQ 240 (361)
T ss_dssp GGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCC
T ss_pred HHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcCCCcccccCC
Confidence 8888776555442 2 3577899999987 99999998632 233443 78899999999988521
Q ss_pred --------CCcccCChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC---cEEEEEeccCchhHHhhc
Q 017971 253 --------PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFADTF 320 (363)
Q Consensus 253 --------p~~~~lt~~~~~~l~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~---~~f~~vd~~~~~~~~~~~ 320 (363)
..+..++..++..+. ..++++++.|+. .-....+.+...+.++|..+++ +.++.+|+..+. ++.+
T Consensus 241 ~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a-~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~ 317 (361)
T 3uem_A 241 ELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYA-PWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAV 317 (361)
T ss_dssp CCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSC
T ss_pred CCCcccccCCcEEeecCchhhhcccCCCcEEEEEec-CcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhc
Confidence 125567788888765 456667666664 4677778899999999998875 999999998765 6788
Q ss_pred CCCCCCCCCeEEEEeCC-C-CeeEEEEEEeehhhhhHhhh
Q 017971 321 EANKKSKLPKMVVWDGN-E-NYLTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 321 gi~~~~~~P~~vi~~~~-~-~y~~~~~~~~~~~~~~~~~~ 358 (363)
++ ...|++++++.+ | .....+|....+.+..|+.+
T Consensus 318 ~v---~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~ 354 (361)
T 3uem_A 318 KV---HSFPTLKFFPASADRTVIDYNGERTLDGFKKFLES 354 (361)
T ss_dssp CC---CSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTT
T ss_pred CC---cccCeEEEEECCCCcceeEecCCCCHHHHHHHHHh
Confidence 88 679999999655 3 46777888888888888865
No 19
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.86 E-value=9.2e-22 Score=152.49 Aligned_cols=115 Identities=42% Similarity=0.712 Sum_probs=104.9
Q ss_pred cCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 39 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
+..++.+..+++++|++.+.++++++|.||++||++|+++.|.|.++++.+++.+.++.++.+||+++++++++|+|.++
T Consensus 3 ~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 82 (120)
T 1mek_A 3 PEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGY 82 (120)
T ss_dssp CCEETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSS
T ss_pred ccCCCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcc
Confidence 45567899999999999998889999999999999999999999999998876556799999999999999999999999
Q ss_pred CEEEEEeCCEE---EeecCCCCHHHHHHHHHhhcCCCc
Q 017971 119 PTLKIFMHGIP---TEYYGPRKAELLVRYLKKFVAPDV 153 (363)
Q Consensus 119 Pt~~~~~~g~~---~~y~g~~~~~~i~~~i~~~~~~~v 153 (363)
|++++|++|+. ..|.|.++.+.|.+|+.+.+++++
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~~ 120 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAA 120 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCCC
T ss_pred cEEEEEeCCCcCCcccccCccCHHHHHHHHHhccCCCC
Confidence 99999999875 468999999999999999988764
No 20
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.85 E-value=1.5e-20 Score=143.73 Aligned_cols=106 Identities=18% Similarity=0.278 Sum_probs=97.7
Q ss_pred CCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 42 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
...+..+++++|++.+ +++++++|.||++||++|+.+.|.+.++++.+.+ ++.|+.+|++++++++++|+|.++||
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 79 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE---SFGFYYVDVEEEKTLFQRFSLKGVPQ 79 (111)
T ss_dssp CCCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSCE
T ss_pred CCcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC---ceEEEEEECCcChhHHHhcCCCcCCE
Confidence 4578999999999999 7889999999999999999999999999988754 49999999999999999999999999
Q ss_pred EEEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 121 LKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 121 ~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+++|++|+.+ .+.|..+.+.+.+|+.+.++
T Consensus 80 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 80 ILYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 9999999876 58999999999999988753
No 21
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.85 E-value=1.5e-20 Score=143.65 Aligned_cols=106 Identities=35% Similarity=0.595 Sum_probs=96.1
Q ss_pred CCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
.+.+..+++++|++.+. +++++|.||++||++|+.+.|.|.++++.+......+.++.+||++++++|++|+|.++||+
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 46799999999999998 68999999999999999999999999987654445699999999999999999999999999
Q ss_pred EEEeCCEEE-eecCCCCHHHHHHHHHhh
Q 017971 122 KIFMHGIPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
++|++|+.+ .|.|..+.+.|.+|+.++
T Consensus 83 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 999999876 589999999999999875
No 22
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=1.9e-20 Score=146.70 Aligned_cols=113 Identities=26% Similarity=0.493 Sum_probs=101.4
Q ss_pred CCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 41 IDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
..+.++.+++++|++.+++ .++|.||++||++|+++.|.|.++++.+.+. ++.|+.|||+++++++++|+|.++||
T Consensus 5 ~~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt 80 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDL--EVNIAKVDVTEQPGLSGRFIINALPT 80 (126)
T ss_dssp CCCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccC--CeEEEEEECcCCHHHHHHcCCcccCE
Confidence 3578999999999998764 3999999999999999999999999987642 49999999999999999999999999
Q ss_pred EEEEeCCEEEeecCCCCHHHHHHHHHhhcCCCceecC
Q 017971 121 LKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILN 157 (363)
Q Consensus 121 ~~~~~~g~~~~y~g~~~~~~i~~~i~~~~~~~v~~i~ 157 (363)
+++|++|+...|.|..+.+.|.+|+.+.+.+.+..+.
T Consensus 81 ~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 117 (126)
T 1x5e_A 81 IYHCKDGEFRRYQGPRTKKDFINFISDKEWKSIEPVS 117 (126)
T ss_dssp EEEEETTEEEECCSCCCHHHHHHHHHTCGGGGSCEEC
T ss_pred EEEEeCCeEEEeecCCCHHHHHHHHHHHhhccCCCch
Confidence 9999999977899999999999999999877666554
No 23
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.85 E-value=2.3e-20 Score=161.83 Aligned_cols=191 Identities=12% Similarity=0.069 Sum_probs=140.5
Q ss_pred hhHHHhH--cCCCeEEEEEE-----CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEE
Q 017971 51 SNFDSAI--SSFDYILVDFY-----APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (363)
Q Consensus 51 ~~f~~~l--~~~~~~lv~fy-----~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 123 (363)
+.+++.+ +..++++|.|| +|||+||+++.|+|.++++.+.+ .+++.++.|||++++++|++|+|+++||+++
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~-~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 87 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVG-QDKIKLDIYSPFTHKEETEKYGVDRVPTIVI 87 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHC-TTTEEEEEECTTTCHHHHHHTTCCBSSEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCC-CCceEEEEecCcccHHHHHHcCCCcCcEEEE
Confidence 4455556 34466666666 89999999999999999988754 3459999999999999999999999999999
Q ss_pred EeCCE-EEeecCCCCHHHHHHHHHhhcC--CCceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHH
Q 017971 124 FMHGI-PTEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALK 192 (363)
Q Consensus 124 ~~~g~-~~~y~g~~~~~~i~~~i~~~~~--~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~a~~ 192 (363)
|++|. ..+|.|.++.+++.+|+..... ..+..++. ..++.+...... ++++.|+..+ +.+..++..
T Consensus 88 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~--~~~v~F~a~wC~~C~~~~~~~~~~~~~ 164 (229)
T 2ywm_A 88 EGDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSE-KTLELLQVVDIP--IEIWVFVTTSCGYCPSAAVMAWDFALA 164 (229)
T ss_dssp ESSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCH-HHHHHHTTCCSC--EEEEEEECTTCTTHHHHHHHHHHHHHH
T ss_pred ECCCcccceecCCccHHHHHHHHHHHHhccCCccCCCH-HHHHHHHhcCCC--eEEEEEECCCCcchHHHHHHHHHHHHH
Confidence 98654 5679999999999999988753 44555644 567777643331 3355565442 235555555
Q ss_pred hhhhhHH-HHhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCCHHHHHHHHHhh
Q 017971 193 YKKKAWF-AVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 250 (363)
Q Consensus 193 ~~~~~~~-~~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~~~~~~l~~fi~~~ 250 (363)
+. ...+ .+..+..++++..|++.++|++++ . +....+.|..+.++|.+|+.+.
T Consensus 165 ~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~-~---G~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 165 ND-YITSKVIDASENQDLAEQFQVVGVPKIVI-N---KGVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp CT-TEEEEEEEGGGCHHHHHHTTCCSSSEEEE-G---GGTEEEESCCCHHHHHHHHHHH
T ss_pred CC-CeEEEEEECCCCHHHHHHcCCcccCEEEE-C---CEEEEeeCCCCHHHHHHHHHHH
Confidence 52 2222 222344677899999999999888 2 3445588999999999999875
No 24
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.84 E-value=3e-20 Score=142.49 Aligned_cols=105 Identities=28% Similarity=0.502 Sum_probs=97.0
Q ss_pred CeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEE
Q 017971 44 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (363)
Q Consensus 44 ~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 123 (363)
.++++++++|++.+ ++++++|.||++||++|+++.|.+.++++.+.+ ++.++.+|++++++++++|+|.++|++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 77 (112)
T 2voc_A 2 AIVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD---KLKIVKIDVDENQETAGKYGVMSIPTLLV 77 (112)
T ss_dssp CCEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT---TCEEEEEETTTCCSHHHHTTCCSBSEEEE
T ss_pred CeEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 46889999999999 889999999999999999999999999998764 39999999999999999999999999999
Q ss_pred EeCCEEE-eecCCCCHHHHHHHHHhhcCCC
Q 017971 124 FMHGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 124 ~~~g~~~-~y~g~~~~~~i~~~i~~~~~~~ 152 (363)
|++|+.+ .+.|..+.+.+.+|+.+..+++
T Consensus 78 ~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 78 LKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 9999876 5899999999999999998765
No 25
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.84 E-value=4.2e-20 Score=140.56 Aligned_cols=105 Identities=26% Similarity=0.494 Sum_probs=97.5
Q ss_pred CCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
.+.+..+++++|++.+.++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++++++++++|+|.++|++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 79 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG---KAVFGRLNVDENQKIADKYSVLNIPTT 79 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC---CceEEEEccccCHHHHHhcCcccCCEE
Confidence 46789999999999998899999999999999999999999999998764 499999999999999999999999999
Q ss_pred EEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 122 KIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++|++|+.+ .+.|..+.+.|.+++.+.+
T Consensus 80 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 80 LIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 999999876 4899999999999998875
No 26
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.83 E-value=9.8e-20 Score=147.95 Aligned_cols=111 Identities=32% Similarity=0.555 Sum_probs=100.4
Q ss_pred ccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCc
Q 017971 38 KFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (363)
Q Consensus 38 ~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 117 (363)
.+.-.+.+.++++++|++.++++++++|.||++||++|+.+.|.|+++++.+.+. +.|+.||++++++++++|+|.+
T Consensus 42 ~~~~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~~~~l~~~~~i~~ 118 (155)
T 2ppt_A 42 AGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQAHPAVAGRHRIQG 118 (155)
T ss_dssp CBSCCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTSTHHHHHTTCCS
T ss_pred ccccCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCccHHHHHHcCCCc
Confidence 3444678999999999999977899999999999999999999999999988653 9999999999999999999999
Q ss_pred CCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhcCC
Q 017971 118 FPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 118 ~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~~ 151 (363)
+||+++|++|+.+ .+.|..+.+.|.+|+.+.++.
T Consensus 119 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 119 IPAFILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred CCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 9999999999876 489999999999999988764
No 27
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=8.2e-20 Score=144.32 Aligned_cols=110 Identities=40% Similarity=0.684 Sum_probs=98.2
Q ss_pred CCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhc-CCCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 41 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAK-LKEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~-~~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
..+.+..+++++|++.+ +++++++|.||++||++|+++.|.|.++++.+.. ...++.|+.|||++++++|++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 45789999999999976 6778999999999999999999999999998862 113499999999999999999999999
Q ss_pred CEEEEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 119 PTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 119 Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
|++++|.+|+.+ .|.|.++.+.|.+|+.+.+.
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 999999998754 59999999999999988764
No 28
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.83 E-value=2.7e-20 Score=159.24 Aligned_cols=119 Identities=30% Similarity=0.549 Sum_probs=107.8
Q ss_pred cccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcC
Q 017971 37 TKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (363)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 116 (363)
+.+.++..+..+++++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+ .+.|+.|||++++++|++|+|.
T Consensus 91 g~~~~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~ 167 (210)
T 3apq_A 91 GIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG---LLRIGAVNCGDDRMLCRMKGVN 167 (210)
T ss_dssp STTTTCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCC
T ss_pred cccCCCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC---ceEEEEEECCccHHHHHHcCCC
Confidence 3456778899999999999998889999999999999999999999999998754 3999999999999999999999
Q ss_pred cCCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhcCCCceecCC
Q 017971 117 AFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNS 158 (363)
Q Consensus 117 ~~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~~~v~~i~~ 158 (363)
++||+++|++|+.+ .|.|.++.+.|.+|+.+.+.+.+.+|++
T Consensus 168 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 168 SYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp SSSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred cCCeEEEEECCCceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 99999999988754 5899999999999999999998888753
No 29
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.83 E-value=7.6e-20 Score=138.43 Aligned_cols=102 Identities=34% Similarity=0.527 Sum_probs=94.6
Q ss_pred CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
..+.++++++|++.+ ++++++|.||++||++|+.+.|.+.++++.+.+. +.++.+|++++++++++|+|.++|+++
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDENPSTAAKYEVMSIPTLI 78 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCcCHHHHHhCCCcccCEEE
Confidence 468999999999999 8899999999999999999999999999987643 999999999999999999999999999
Q ss_pred EEeCCEEE-eecCCCCHHHHHHHHHhh
Q 017971 123 IFMHGIPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 123 ~~~~g~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
+|++|+.+ .+.|..+.+.+.+|+.+.
T Consensus 79 ~~~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 79 VFKDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred EEeCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 99999876 589999999999999875
No 30
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.83 E-value=1.2e-19 Score=137.91 Aligned_cols=104 Identities=35% Similarity=0.585 Sum_probs=94.6
Q ss_pred CCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+.|..+++++|++.+ +++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++++++++++|+|.++|++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGIPTL 78 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCTTHHHHTTCCSSSEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCcccCEE
Confidence 568999999999765 6778999999999999999999999999988754 399999999999999999999999999
Q ss_pred EEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 122 KIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++|++|+.+ .+.|..+.+.+.+|+.+.+
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 79 LLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 999999876 4899999999999998765
No 31
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.83 E-value=4.3e-20 Score=159.74 Aligned_cols=192 Identities=18% Similarity=0.219 Sum_probs=142.0
Q ss_pred hhHHHhH---cCCCeEEEEEECC-CChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc--chhhhhhCCcCcCCEEEEE
Q 017971 51 SNFDSAI---SSFDYILVDFYAP-WCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--YSRLASKQEIDAFPTLKIF 124 (363)
Q Consensus 51 ~~f~~~l---~~~~~~lv~fy~~-~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~ 124 (363)
+.+++.+ .+++.+++.||++ ||++|+++.|.|+++++. .+++.++.+||++ ++++|++|+|.++||+++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~----~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL----TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTIT 85 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT----CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh----CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEE
Confidence 4556666 2346778999999 999999999999999853 2359999999999 9999999999999999999
Q ss_pred eCCEE--EeecCCCCHHHHHHHHHhhcC--CCceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHH
Q 017971 125 MHGIP--TEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALK 192 (363)
Q Consensus 125 ~~g~~--~~y~g~~~~~~i~~~i~~~~~--~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~a~~ 192 (363)
++|+. ..|.|.+..+.+.+|+..... .....+ +...++.+...... ++++.|+..+ +.+.+++..
T Consensus 86 ~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~--~~~v~F~a~wC~~C~~~~p~~~~l~~~ 162 (226)
T 1a8l_A 86 QDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQD--VRILVFVTPTCPYCPLAVRMAHKFAIE 162 (226)
T ss_dssp ETTBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSC--EEEEEEECSSCTTHHHHHHHHHHHHHH
T ss_pred cCCceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCC--cEEEEEeCCCCCccHHHHHHHHHHHHh
Confidence 98864 579999999999999988653 233444 33456665433331 3366666442 346666666
Q ss_pred hh----hhhHHH-HhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCCHHHHHHHHHhh
Q 017971 193 YK----KKAWFA-VAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 250 (363)
Q Consensus 193 ~~----~~~~~~-~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~~~~~~l~~fi~~~ 250 (363)
+. +...+. +..+.+..+...|++.++|++++++.+ +....+.|..+.++|.+||++.
T Consensus 163 ~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 163 NTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred cccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHh
Confidence 65 222222 223445778999999999999998742 3456788999999999999874
No 32
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=4.6e-20 Score=145.26 Aligned_cols=113 Identities=37% Similarity=0.662 Sum_probs=100.2
Q ss_pred ccccccCCCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhh
Q 017971 34 EEETKFKIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASK 112 (363)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~ 112 (363)
+....+...+.+..+++++|++.+ +++++++|.||++||++|+++.|.|.++++.+.+ .+.++.+||++++++|++
T Consensus 8 ~~~~l~~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~l~~~ 84 (130)
T 2dml_A 8 AVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD---VVKVGAVNADKHQSLGGQ 84 (130)
T ss_dssp CCCCSSCTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHH
T ss_pred ccccccCCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC---ceEEEEEeCCCCHHHHHH
Confidence 334556677889999999999965 6778999999999999999999999999988764 399999999999999999
Q ss_pred CCcCcCCEEEEEeCCE--EEeecCCCCHHHHHHHHHhhc
Q 017971 113 QEIDAFPTLKIFMHGI--PTEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 113 ~~i~~~Pt~~~~~~g~--~~~y~g~~~~~~i~~~i~~~~ 149 (363)
|+|.++||+++|.+|. ...|.|.++.+.+.+|+.+.+
T Consensus 85 ~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 85 YGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp HTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 9999999999998765 457999999999999998875
No 33
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.83 E-value=9.7e-20 Score=138.46 Aligned_cols=106 Identities=29% Similarity=0.584 Sum_probs=95.8
Q ss_pred CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
+.+.++++++|+++++++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++++++++++|++.++|+++
T Consensus 1 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 77 (109)
T 2yzu_A 1 AKPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG---KLLVAKLDVDENPKTAMRYRVMSIPTVI 77 (109)
T ss_dssp -CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC---ceEEEEEECCCCHhHHHhCCCCcCCEEE
Confidence 3578999999999888889999999999999999999999999988764 3999999999999999999999999999
Q ss_pred EEeCCEEE-eecCCCCHHHHHHHHHhhcCC
Q 017971 123 IFMHGIPT-EYYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 123 ~~~~g~~~-~y~g~~~~~~i~~~i~~~~~~ 151 (363)
+|++|+.+ .+.|..+.+.+.+|+.+.++.
T Consensus 78 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 78 LFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 99999876 489999999999999988753
No 34
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.83 E-value=9.6e-20 Score=149.28 Aligned_cols=114 Identities=13% Similarity=0.232 Sum_probs=97.7
Q ss_pred CCCeEEcChhhHHHhHcC--CCeEEEEEEC-------CCChhhhhHHHHHHHHHHHhhcCC--CCeEEEEEeCccchhhh
Q 017971 42 DGKVIELDESNFDSAISS--FDYILVDFYA-------PWCGHCKRLAPQLDEAAPILAKLK--EPIVIAKVDADKYSRLA 110 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~--~~~~lv~fy~-------~~C~~C~~~~~~~~~~a~~~~~~~--~~v~~~~vd~~~~~~l~ 110 (363)
.+.|++||+++|++.+.. +.+++|.||| +||++|+.+.|+|+++|+.+.+.. +++.|++||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 467999999999998854 4579999999 499999999999999999986211 35999999999999999
Q ss_pred hhCCcCcCCEEEEEeCCE--E-----------Eee---cC-CCCHHHHHHHHHhhcCCCcee
Q 017971 111 SKQEIDAFPTLKIFMHGI--P-----------TEY---YG-PRKAELLVRYLKKFVAPDVSI 155 (363)
Q Consensus 111 ~~~~i~~~Pt~~~~~~g~--~-----------~~y---~g-~~~~~~i~~~i~~~~~~~v~~ 155 (363)
++|+|+++||+++|++|. . ..| .| .++++.|.+|+.+.++..+..
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I 158 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITV 158 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccc
Confidence 999999999999999874 1 345 35 899999999999999866643
No 35
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.83 E-value=8.4e-20 Score=138.06 Aligned_cols=102 Identities=34% Similarity=0.597 Sum_probs=93.5
Q ss_pred eEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEE
Q 017971 45 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF 124 (363)
Q Consensus 45 v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 124 (363)
|+++++++|++.++++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++++++++++|+|.++|++++|
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD---KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 68899999998888889999999999999999999999999988754 399999999999999999999999999999
Q ss_pred eCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 125 MHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 125 ~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++|+.+ .+.|..+.+.+.+++.+.+
T Consensus 79 ~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 999866 4899999999999987754
No 36
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.83 E-value=1.3e-19 Score=146.14 Aligned_cols=112 Identities=24% Similarity=0.483 Sum_probs=101.9
Q ss_pred cccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcC
Q 017971 37 TKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (363)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 116 (363)
+.+...+.+..+++++|++.+.++++++|.||++||++|+++.|.|+++++.+.+ ++.|+.||++++++++++|+|.
T Consensus 32 ~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~ 108 (148)
T 3p2a_A 32 GHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG---KVRFVKVNTEAEPALSTRFRIR 108 (148)
T ss_dssp CCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCC
T ss_pred CCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC---ceEEEEEECcCCHHHHHHCCCC
Confidence 3444678899999999999998889999999999999999999999999988754 3999999999999999999999
Q ss_pred cCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcCC
Q 017971 117 AFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 117 ~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~~ 151 (363)
++||+++|++|+.+. |.|..+.+.|.+|+.+.+..
T Consensus 109 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 109 SIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp SSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred ccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999999998764 89999999999999988653
No 37
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.82 E-value=5.6e-20 Score=143.42 Aligned_cols=105 Identities=15% Similarity=0.131 Sum_probs=94.4
Q ss_pred CCCeEEcChhhHHHhHcCCC-eEEEEEECCCC--hhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 42 DGKVIELDESNFDSAISSFD-YILVDFYAPWC--GHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~-~~lv~fy~~~C--~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
+.....+|+++|++.+.+.+ +++|.|||+|| ++|+.+.|.++++++++.+ ++.|++||.+++++++++|+|+++
T Consensus 14 ~~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~---~v~~~KVdvDe~~~la~~ygV~si 90 (137)
T 2qsi_A 14 PNAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG---RLVAAEVAAEAERGLMARFGVAVC 90 (137)
T ss_dssp ---CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT---TEEEEEECGGGHHHHHHHHTCCSS
T ss_pred hcCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC---CcEEEEEECCCCHHHHHHcCCccC
Confidence 45567999999999986665 99999999999 9999999999999998754 499999999999999999999999
Q ss_pred CEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 119 Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
||+++|++|+.+. ..|..+.+.|.+|+.+++
T Consensus 91 PTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 91 PSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp SEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999885 789999999999998776
No 38
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.82 E-value=1.4e-19 Score=143.79 Aligned_cols=108 Identities=35% Similarity=0.558 Sum_probs=98.1
Q ss_pred CCCCeEEcChhhHHHhHc------------CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh
Q 017971 41 IDGKVIELDESNFDSAIS------------SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR 108 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l~------------~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~ 108 (363)
....++.+++++|.+.+. ++++++|.||++||++|+++.|.+.++++.+.+ ++.++.|||+++++
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~ 83 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG---QIVIYKVDTEKEQE 83 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CEEEEEEeCCCCHH
Confidence 356799999999999885 468999999999999999999999999988754 39999999999999
Q ss_pred hhhhCCcCcCCEEEEE-eCCEEEeecCCCCHHHHHHHHHhhcCC
Q 017971 109 LASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 109 l~~~~~i~~~Pt~~~~-~~g~~~~y~g~~~~~~i~~~i~~~~~~ 151 (363)
++++|+|.++||+++| ++|+.+.+.|..+.+.|.+|+.+....
T Consensus 84 l~~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 84 LAGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HHHHTTCCSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHcCCCCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999 788887899999999999999988753
No 39
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.82 E-value=2.3e-19 Score=135.96 Aligned_cols=103 Identities=26% Similarity=0.532 Sum_probs=94.4
Q ss_pred CCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+.+..+++++|++.+ +++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++++++++++|+|.++|++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG---KVTVAKVNIDDNPETPNAYQVRSIPTL 78 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT---SEEEEEEETTTCCHHHHHTTCCSSSEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC---cEEEEEEECCCCHHHHHhcCCCccCEE
Confidence 468999999999876 6778999999999999999999999999998764 499999999999999999999999999
Q ss_pred EEEeCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 122 KIFMHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
++|++|+.+. +.|..+.+.+.+|+.+.
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999998764 89999999999999875
No 40
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.82 E-value=8.9e-20 Score=145.75 Aligned_cols=109 Identities=36% Similarity=0.530 Sum_probs=95.6
Q ss_pred cCCCCCeEEcChhhHHHhHcC------------CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 017971 39 FKIDGKVIELDESNFDSAISS------------FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~l~~------------~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
....+.+..+++++|++.+.. +++++|.||++||++|+.+.|.|.++++.+.+ ++.++.|||+++
T Consensus 18 ~~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~ 94 (141)
T 3hxs_A 18 EKPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG---KIYIYKVNVDKE 94 (141)
T ss_dssp -----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEETTTC
T ss_pred cCCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC---ceEEEEEECCCC
Confidence 445678999999999998853 78999999999999999999999999998764 399999999999
Q ss_pred hhhhhhCCcCcCCEEEEE-eCCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 107 SRLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 107 ~~l~~~~~i~~~Pt~~~~-~~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
++++++|+|.++|++++| ++|+...+.|..+.+.|.+|+.+.+.
T Consensus 95 ~~~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 95 PELARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHHHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999999999999 56777789999999999999988764
No 41
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.82 E-value=1.1e-19 Score=145.16 Aligned_cols=106 Identities=25% Similarity=0.459 Sum_probs=97.6
Q ss_pred CCCeEEcChhhHH-HhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 42 DGKVIELDESNFD-SAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 42 ~~~v~~l~~~~f~-~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
.+.+..+++++|+ .+++++++++|.||++||++|+++.|.|.++++.+.+ ++.|+.|||++++++|++|+|.++||
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 81 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS---SAVFGRINIATNPWTAEKYGVQGTPT 81 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TSEEEEEETTTCHHHHHHHTCCEESE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC---ceEEEEEECCcCHhHHHHCCCCcCCE
Confidence 5689999999999 5567789999999999999999999999999998865 39999999999999999999999999
Q ss_pred EEEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 121 LKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 121 ~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+++|++|+.+ .|.|..+.+.|.+|+.+.+.
T Consensus 82 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 82 FKFFCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 9999999876 58999999999999998864
No 42
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.82 E-value=1.5e-19 Score=143.11 Aligned_cols=102 Identities=15% Similarity=0.189 Sum_probs=89.8
Q ss_pred eEEcC-hhhHHHhH--cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 45 VIELD-ESNFDSAI--SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 45 v~~l~-~~~f~~~l--~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+..|+ .++|++.+ +++++++|.|||+||++|+...|.++++|+++.+. +.|++||.+++++++++|+|.+.||+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe~~e~a~~y~V~siPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITEVPDFNTMYELYDPVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTCCTTTTTTTCCSSEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCCCHHHHHHcCCCCCCEE
Confidence 56665 48899877 36789999999999999999999999999988654 99999999999999999999999999
Q ss_pred EEEeCCEEE----------eecCCCC-HHHHHHHHHhhc
Q 017971 122 KIFMHGIPT----------EYYGPRK-AELLVRYLKKFV 149 (363)
Q Consensus 122 ~~~~~g~~~----------~y~g~~~-~~~i~~~i~~~~ 149 (363)
++|++|+.+ +..|..+ .++|++++....
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999999987 4678776 888888887664
No 43
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.82 E-value=9.3e-20 Score=140.65 Aligned_cols=103 Identities=25% Similarity=0.489 Sum_probs=92.2
Q ss_pred CCCeEEcChhhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 42 DGKVIELDESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
.......+.++|++++. ++++++|.||++||++|+++.|.|+++++.+.+ +.|+.||++++++++++|+|.++|
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----v~~~~vd~d~~~~l~~~~~v~~~P 86 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASECEVKSMP 86 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT----SEEEEEETTTTHHHHHHTTCCSSS
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCcccc
Confidence 45667788999999997 789999999999999999999999999977643 999999999999999999999999
Q ss_pred EEEEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 120 TLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 120 t~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
|+++|++|+.+ .+.|. +.+.|.+++.+.+
T Consensus 87 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 87 TFQFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEEEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 99999999766 48898 9999999998753
No 44
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.81 E-value=2.4e-19 Score=140.80 Aligned_cols=104 Identities=34% Similarity=0.549 Sum_probs=94.6
Q ss_pred CCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+.+..+++++|++.+ +++++++|.||++||++|+++.|.|+++++.+.+ ++.|+.|||+++++++++|+|.++||+
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 98 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGIPTL 98 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT---TEEEEEEETTTCCTTSGGGTCCSSSEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCccCEE
Confidence 458999999999765 7789999999999999999999999999988754 399999999999999999999999999
Q ss_pred EEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 122 KIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++|++|+.+ .+.|..+.+.|.+|+.+.+
T Consensus 99 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 99 LLFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 999999876 4899999999999998764
No 45
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.81 E-value=2.7e-19 Score=134.65 Aligned_cols=102 Identities=32% Similarity=0.592 Sum_probs=94.1
Q ss_pred eEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEE
Q 017971 45 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF 124 (363)
Q Consensus 45 v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 124 (363)
|+++++++|++.++++++++|.||++||++|+.+.|.+.++++.+.+ +.++.+|++++++++++|++.++|++++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 57899999999998889999999999999999999999999987643 99999999999999999999999999999
Q ss_pred eCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 125 MHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 125 ~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
++|+.+ .+.|..+.+.+.+|+.+.++
T Consensus 77 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 999876 58999999999999988764
No 46
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.81 E-value=1.9e-19 Score=157.10 Aligned_cols=112 Identities=43% Similarity=0.783 Sum_probs=105.4
Q ss_pred CCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
.+.+..++.++|++.++++++++|.||++||++|+.+.|.|.++++.+.+...++.++.+||++++++|++|+|.++||+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 208 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208 (241)
T ss_dssp CCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEE
Confidence 45789999999999998889999999999999999999999999999987667799999999999999999999999999
Q ss_pred EEEeCCEEEeecCCCCHHHHHHHHHhhcCCCc
Q 017971 122 KIFMHGIPTEYYGPRKAELLVRYLKKFVAPDV 153 (363)
Q Consensus 122 ~~~~~g~~~~y~g~~~~~~i~~~i~~~~~~~v 153 (363)
++|++|+.+.|.|.++.+.|.+|+.+..++.+
T Consensus 209 ~~~~~g~~~~~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 209 KIFRKGRPYDYNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEEETTEEEECCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEEECCeEEEecCCCCHHHHHHHHHhhhCCCC
Confidence 99999999999999999999999999988764
No 47
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.81 E-value=6e-20 Score=143.81 Aligned_cols=108 Identities=14% Similarity=0.113 Sum_probs=96.4
Q ss_pred CeEEcChhhHHHhHcCCCeEEEEEECCC--ChhhhhHHHHHHHHHHHhhcCCCC-eEEEEEeCccchhhhhhCCcCcCCE
Q 017971 44 KVIELDESNFDSAISSFDYILVDFYAPW--CGHCKRLAPQLDEAAPILAKLKEP-IVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 44 ~v~~l~~~~f~~~l~~~~~~lv~fy~~~--C~~C~~~~~~~~~~a~~~~~~~~~-v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
.+..+++++|++.+.++++++|.||++| |++|+.+.|.++++++++. ++ +.|++||.+++++++++|+|+++||
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~---g~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP---DYTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT---TSCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC---CCeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 6789999999999987789999999999 9999999999999998764 35 9999999999999999999999999
Q ss_pred EEEEeCCEEEe-ecCCCCHHHHHHHHHhhcCCCce
Q 017971 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFVAPDVS 154 (363)
Q Consensus 121 ~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~~~v~ 154 (363)
+++|++|+.+. ..|..+.+.|.+|+.+.+..+..
T Consensus 95 lilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 95 TLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQE 129 (140)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC----
T ss_pred EEEEECCEEEEEEecCCCHHHHHHHHHHHhcCCCC
Confidence 99999999885 78999999999999988764443
No 48
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.81 E-value=3.8e-19 Score=137.82 Aligned_cols=106 Identities=31% Similarity=0.526 Sum_probs=95.9
Q ss_pred CCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 41 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
..+++..+++++|++.+ +.+++++|.||++||++|+++.|.+.++++.+.+ ++.++.+|++++++++++|+|.++|
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~P 87 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG---KVVMAKVDIDDHTDLAIEYEVSAVP 87 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---SSEEEEEETTTTHHHHHHTTCCSSS
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCHHHHHHcCCCccc
Confidence 35689999999999866 6678999999999999999999999999987754 4999999999999999999999999
Q ss_pred EEEEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 120 TLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 120 t~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++++|++|+.+ .+.|..+.+.|.+|+.+.+
T Consensus 88 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 99999999866 5899999999999998765
No 49
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.81 E-value=5.5e-19 Score=135.72 Aligned_cols=106 Identities=22% Similarity=0.468 Sum_probs=96.4
Q ss_pred CCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 42 DGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
.+.|.++++++|++.+ ..+++++|.||++||++|+++.|.++++++.+.+ ++.++.+|++++++++++|+|.++|+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD---RLKVVKLEIDPNPTTVKKYKVEGVPA 82 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEESTTCHHHHHHTTCCSSSE
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC---cEEEEEEEcCCCHHHHHHcCCCceeE
Confidence 3569999999999876 6778999999999999999999999999988754 39999999999999999999999999
Q ss_pred EEEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 121 LKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 121 ~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+++|++|+.+ .+.|..+.+.+.+|+.+.++
T Consensus 83 ~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 83 LRLVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 9999999876 48999999999999998765
No 50
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.81 E-value=4.5e-19 Score=135.69 Aligned_cols=105 Identities=30% Similarity=0.608 Sum_probs=94.6
Q ss_pred CCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+.|..+++++|++.+ +++++++|.||++||++|+++.|.+.++++.+.+ ++.++.+|++++++++++|+|.++||+
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 81 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD---KIEIVKLNIDENPGTAAKYGVMSIPTL 81 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC---CeEEEEEEcCCCHHHHHhCCCCcccEE
Confidence 468999999998765 6678999999999999999999999999988754 399999999999999999999999999
Q ss_pred EEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 122 KIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
++|++|+.+ .+.|..+.+.+.+|+.+.+.
T Consensus 82 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999999876 48999999999999987753
No 51
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.81 E-value=4.9e-19 Score=138.43 Aligned_cols=105 Identities=26% Similarity=0.388 Sum_probs=94.6
Q ss_pred CCCCeEEcCh-hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 41 IDGKVIELDE-SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 41 ~~~~v~~l~~-~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
....+.++++ ++|++.+.++++++|.||++||++|+++.|.|.++++.+. ++.|+.|||+++++++++|+|.++|
T Consensus 17 ~~~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v~~~P 92 (125)
T 1r26_A 17 RYPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNNSEIVSKCRVLQLP 92 (125)
T ss_dssp CCSCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cccceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCHHHHHHcCCCccc
Confidence 3455899999 9999999888999999999999999999999999998763 3999999999999999999999999
Q ss_pred EEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcC
Q 017971 120 TLKIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 120 t~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~ 150 (363)
|+++|++|+.+. +.| .+.+.|.+++.+.+.
T Consensus 93 t~~i~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 93 TFIIARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEEEETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEEEeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 999999998764 788 688999999987753
No 52
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.80 E-value=4.6e-19 Score=134.44 Aligned_cols=103 Identities=28% Similarity=0.560 Sum_probs=93.3
Q ss_pred CeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 44 KVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 44 ~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
.|..+++++|++.+ +++++++|.||++||++|+++.|.+.++++.+.+ ++.++.+|++++++++++|+|.++||++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD---KLKCVKLNTDESPNVASEYGIRSIPTIM 78 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHHTCCSSCEEE
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC---ceEEEEEECCCCHHHHHHCCCCcCCEEE
Confidence 47889999999976 6678999999999999999999999999988754 3999999999999999999999999999
Q ss_pred EEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 123 IFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 123 ~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
+|++|+.+ .+.|..+.+.+.+++.+.+
T Consensus 79 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99988765 4899999999999998765
No 53
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.80 E-value=4.6e-19 Score=164.26 Aligned_cols=207 Identities=21% Similarity=0.249 Sum_probs=170.9
Q ss_pred hhcCCCceecCChHHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHHHHhhhcchhhhhhcCCCCCCeE
Q 017971 147 KFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPAL 221 (363)
Q Consensus 147 ~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 221 (363)
....+.+..|++.+++++++..++ +++|+|+++. ..+.++|..+ +.+.|+ .+.+.++++.++++. |++
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~~~---~~vvgff~~~~~~~~~~f~~~A~~~-~~~~F~--~t~~~~v~~~~~v~~-~~i 85 (361)
T 3uem_A 13 GPGSEFATTLPDGAAAESLVESSE---VAVIGFFKDVESDSAKQFLQAAEAI-DDIPFG--ITSNSDVFSKYQLDK-DGV 85 (361)
T ss_dssp CCCCSSSEECCSHHHHHHHHHTSS---EEEEEECSCTTSHHHHHHHHHHHHC-SSSCEE--EECCHHHHHHTTCSS-SEE
T ss_pred CCccccceecCCHHHHHHHHhcCC---cEEEEEEcCCCchHHHHHHHHHhcC-CCceEE--EECcHHHHHHhCCCC-CeE
Confidence 335577899999999999998876 6888888542 3578888877 444444 456788999999987 999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHhhcCCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC
Q 017971 222 VALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR 301 (363)
Q Consensus 222 v~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~ 301 (363)
++|++.++....|.|+++.++|.+||..+..|++.++|.+++..+...+.+.++++|........+++...++++|++++
T Consensus 86 ~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~ 165 (361)
T 3uem_A 86 VLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFK 165 (361)
T ss_dssp EEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGT
T ss_pred EEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHcc
Confidence 99998777888999999999999999999999999999999999887776665555555566677889999999999999
Q ss_pred C-cEEEEEecc--CchhHHhhcCCCCCCCCCeEEEEeCCC---CeeEEEEEEeehhhhhHhhhhhc
Q 017971 302 E-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNE---NYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 302 ~-~~f~~vd~~--~~~~~~~~~gi~~~~~~P~~vi~~~~~---~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+ +.|+++|+. +++.+++.||+ ...+.|++++++..+ +|....+..+.+.+..|+..+|.
T Consensus 166 ~~i~f~~vd~~~~~~~~~~~~fgi-~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 166 GKILFIFIDSDHTDNQRILEFFGL-KKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp TTCEEEEECTTSGGGHHHHHHTTC-CTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHT
T ss_pred CceEEEEecCChHHHHHHHHHcCC-CccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhc
Confidence 8 999999998 68999999999 456799999999843 44444578899999999999875
No 54
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.80 E-value=9.7e-20 Score=137.88 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=77.7
Q ss_pred ChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeCCE
Q 017971 49 DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGI 128 (363)
Q Consensus 49 ~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~ 128 (363)
+.++|++.++++++++|.||++||++|+.+.|.++++++.+. ++.++.+|++++++++++|+|.++||+++|++|+
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 457788888888999999999999999999999999998762 4999999999999999999999999999999998
Q ss_pred EE-eecCCCCHHHHHHHHHhhc
Q 017971 129 PT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 129 ~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
.+ .+.|..+.+.|.+++.+++
T Consensus 83 ~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEEeCCcCHHHHHHHHHHhh
Confidence 76 4899999999999998764
No 55
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.80 E-value=8.1e-19 Score=132.46 Aligned_cols=101 Identities=31% Similarity=0.591 Sum_probs=92.0
Q ss_pred eEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEE
Q 017971 45 VIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKI 123 (363)
Q Consensus 45 v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 123 (363)
|.++++++|++.+ +++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++++++++++|+|.++|++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG---KIAVYKLNTDEAPGIATQYNIRSIPTVLF 78 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC---ceEEEEEcCcchHHHHHhCCCCcccEEEE
Confidence 6789999999976 5678999999999999999999999999988754 39999999999999999999999999999
Q ss_pred EeCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 124 FMHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 124 ~~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
|++|+.+. +.|..+.+.+.+++.+.
T Consensus 79 ~~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 79 FKNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp EETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred EeCCeEEEEEecCCCHHHHHHHHHhh
Confidence 99998764 89999999999999875
No 56
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.80 E-value=1.1e-18 Score=132.45 Aligned_cols=101 Identities=24% Similarity=0.432 Sum_probs=88.1
Q ss_pred eEEc-ChhhHHHhH--cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 45 VIEL-DESNFDSAI--SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 45 v~~l-~~~~f~~~l--~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+..+ +.++|++.+ .++++++|.||++||++|+++.|.++++++.+. ++.|+.+|++++++++++|+|.++||+
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQCQGTAATNNISATPTF 78 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHhcCCCcccEE
Confidence 5556 668999998 568999999999999999999999999998762 499999999999999999999999999
Q ss_pred EEEeCCEEEe-ecCCCCHHHHHHHHHhhcC
Q 017971 122 KIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~ 150 (363)
++|++|+.+. +.|. ..++|.+|+.+.++
T Consensus 79 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 79 QFFRNKVRIDQYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHHHC
T ss_pred EEEECCeEEEEEeCC-CHHHHHHHHHHhcC
Confidence 9999998764 7885 45569999987653
No 57
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.80 E-value=1e-18 Score=133.20 Aligned_cols=101 Identities=31% Similarity=0.524 Sum_probs=90.9
Q ss_pred CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
......+.++|++++.++++++|.||++||++|+++.|.++++++.+.+ +.|+.+|++++++++++|+|.++||++
T Consensus 7 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~----~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 82 (109)
T 3f3q_A 7 MVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ----ADFYKLDVDELGDVAQKNEVSAMPTLL 82 (109)
T ss_dssp CCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 3455677899999999999999999999999999999999999987643 899999999999999999999999999
Q ss_pred EEeCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 123 IFMHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
+|++|+.+. +.|. +.+.|.+++.++
T Consensus 83 ~~~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 83 LFKNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 999998764 7887 779999999875
No 58
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.80 E-value=7.8e-19 Score=152.34 Aligned_cols=122 Identities=17% Similarity=0.271 Sum_probs=101.0
Q ss_pred CCCCCeEEcChhhHHHhHcCCCeEEEEEE--CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-----chhhhhh
Q 017971 40 KIDGKVIELDESNFDSAISSFDYILVDFY--APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----YSRLASK 112 (363)
Q Consensus 40 ~~~~~v~~l~~~~f~~~l~~~~~~lv~fy--~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-----~~~l~~~ 112 (363)
...+.++.|++++|++++++++++||.|| ||||+ +.|.|+++|+.+.+..+++.|++|||++ ++++|++
T Consensus 13 ~~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 13 VTCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp --CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 34677999999999998888899999999 99998 9999999999986523459999999999 8999999
Q ss_pred CCcC--cCCEEEEEeCCE---EEee--cCCCCHHHHHHHHHhhcCCCceecCChHHHHHHH
Q 017971 113 QEID--AFPTLKIFMHGI---PTEY--YGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFV 166 (363)
Q Consensus 113 ~~i~--~~Pt~~~~~~g~---~~~y--~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~ 166 (363)
|+|. ++||+++|+ |. +..| .|.++.+.|.+|+.++++.....-....+++.++
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~~~g~i~~~d~l~ 148 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCIKEFNEVL 148 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCCCCCTTCCHHHHHHH
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccccCCCCchHHHHHHH
Confidence 9999 999999999 87 5679 9999999999999999763322222223455444
No 59
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.80 E-value=1.1e-18 Score=133.47 Aligned_cols=104 Identities=30% Similarity=0.593 Sum_probs=93.2
Q ss_pred CCeEEc-ChhhHHHhHcC----CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCc
Q 017971 43 GKVIEL-DESNFDSAISS----FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (363)
Q Consensus 43 ~~v~~l-~~~~f~~~l~~----~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 117 (363)
+.+..+ +.++|++.+.+ +++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+|++++++++++|+|.+
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~ 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDAVAAVAEAAGITA 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTTHHHHHHHTCCB
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCchHHHHHHcCCCc
Confidence 467888 57899999865 89999999999999999999999999988754 49999999999999999999999
Q ss_pred CCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 118 FPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 118 ~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+||+++|++|+.+ .+.|. +.+.|.+|+.+.+.
T Consensus 79 ~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 79 MPTFHVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp SSEEEEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred ccEEEEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 9999999999876 48898 99999999988754
No 60
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.80 E-value=2.3e-19 Score=139.30 Aligned_cols=108 Identities=38% Similarity=0.748 Sum_probs=94.4
Q ss_pred CCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcC--CCCeEEEEEeCccchhhhhhCCcCc
Q 017971 41 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKL--KEPIVIAKVDADKYSRLASKQEIDA 117 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~--~~~v~~~~vd~~~~~~l~~~~~i~~ 117 (363)
..+.+.+|++++|++.+ +++++++|.||++||++|+++.|.|+++++.+.+. ..++.|+.+||++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 46789999999999986 67899999999999999999999999999988652 125999999999887 666 9999
Q ss_pred CCEEEEEeCC-E--EEeecCCCCHHHHHHHHHhhcCC
Q 017971 118 FPTLKIFMHG-I--PTEYYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 118 ~Pt~~~~~~g-~--~~~y~g~~~~~~i~~~i~~~~~~ 151 (363)
+||+++|.+| + ...|.|.++.+.|.+|+.+++..
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 9999999887 4 45699999999999999988753
No 61
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.80 E-value=9.2e-19 Score=133.81 Aligned_cols=104 Identities=25% Similarity=0.465 Sum_probs=92.3
Q ss_pred CCCCeEEcChhhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-cchhhhhhCCcCc
Q 017971 41 IDGKVIELDESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-KYSRLASKQEIDA 117 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~-~~~~l~~~~~i~~ 117 (363)
..+.|..+++++|++.+. ++++++|.||++||++|+++.|.+.++++.+. ++.++.+|++ ++++++++|+|.+
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~~~~~~~~~v~~ 78 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL----DVIFLKLDCNQENKTLAKELGIRV 78 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSTTHHHHHHHCCSB
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC----CeEEEEEecCcchHHHHHHcCCCe
Confidence 357899999999999996 57899999999999999999999999998764 2999999998 7899999999999
Q ss_pred CCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 118 FPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 118 ~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
+||++++++|+.+ .+.|.. .+.|.+++.+..
T Consensus 79 ~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 79 VPTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp SSEEEEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred eeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999999866 478874 899999998764
No 62
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.79 E-value=7.4e-19 Score=136.40 Aligned_cols=107 Identities=34% Similarity=0.597 Sum_probs=95.3
Q ss_pred CCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 41 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
..+.+..+++++|.+.+ +++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+||++++++|++|+|.++|
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~P 86 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT---DLTVAKLDVDTNPETARNFQVVSIP 86 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhcCCCcCC
Confidence 35679999999999765 6778999999999999999999999999988754 3999999999999999999999999
Q ss_pred EEEEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 120 TLKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 120 t~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
++++|++|+.+ .+.|..+.+.+.+|+.+.+.
T Consensus 87 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 87 TLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred EEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999999876 48999999999999987654
No 63
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.79 E-value=2.1e-18 Score=130.47 Aligned_cols=100 Identities=30% Similarity=0.627 Sum_probs=90.4
Q ss_pred eEEcCh-hhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 45 VIELDE-SNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 45 v~~l~~-~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+.++++ ++|++.+. ++++++|.||++||++|+++.|.++++++.+++ ++.++.+|++++++++++|++.++|++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDECEDIAMEYNISSMPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccchHHHHHHcCCCcccEE
Confidence 677888 99999986 789999999999999999999999999988753 499999999999999999999999999
Q ss_pred EEEeCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 122 KIFMHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
++|++|+.+. +.| .+.+.+.+|+.+.
T Consensus 79 ~~~~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred EEEcCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 9999998764 788 7889999999875
No 64
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.79 E-value=1.4e-18 Score=132.99 Aligned_cols=103 Identities=33% Similarity=0.661 Sum_probs=93.7
Q ss_pred CCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
.+....++.++|+++++++++++|.||++||++|+++.|.++++++.+. ++.++.+|++++++++++|+|.++|++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~----~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT----KMVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 4677899999999999988999999999999999999999999998764 399999999999999999999999999
Q ss_pred EEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 122 KIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++|++|+.+ .+.|. +.+.|.+|+.+.+
T Consensus 84 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 999999876 48898 9999999998764
No 65
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=2.6e-19 Score=141.49 Aligned_cols=112 Identities=29% Similarity=0.557 Sum_probs=98.6
Q ss_pred CCCCeEEcChhhHHHhHc-CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 41 IDGKVIELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l~-~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
..+.|..+++++|++.+. ++++++|.||++||++|+++.|.|+++++.+.+. .++.++.+||++++.++++|+|.++|
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~P 83 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATANDITNDQYKVEGFP 83 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTSCCCCSSCCCSSSS
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcCHHHHhhcCCCcCC
Confidence 467899999999999885 4789999999999999999999999999988642 35999999999999999999999999
Q ss_pred EEEEEeCCE---EEeec-CCCCHHHHHHHHHhhcCCCc
Q 017971 120 TLKIFMHGI---PTEYY-GPRKAELLVRYLKKFVAPDV 153 (363)
Q Consensus 120 t~~~~~~g~---~~~y~-g~~~~~~i~~~i~~~~~~~v 153 (363)
|+++|.+|. .+.|. |.++.+.|.+|+.+.+....
T Consensus 84 t~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 84 TIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 999998875 34677 56999999999999987553
No 66
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.79 E-value=1.7e-18 Score=149.30 Aligned_cols=113 Identities=33% Similarity=0.544 Sum_probs=100.4
Q ss_pred cccCCCCCeEEcChhhHHHh-HcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCc
Q 017971 37 TKFKIDGKVIELDESNFDSA-ISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (363)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~-l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i 115 (363)
+.+...+.+..+|+++|++. ++++++++|.||++||++|+.+.|.|+++++.+.+. +.++.|||++++++|++|+|
T Consensus 6 ~~~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~~~l~~~~~v 82 (222)
T 3dxb_A 6 HHHPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQNPGTAPKYGI 82 (222)
T ss_dssp ---CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTCTTTGGGGTC
T ss_pred cCCCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCCHHHHHHcCC
Confidence 34455788999999999985 577899999999999999999999999999987653 99999999999999999999
Q ss_pred CcCCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhcCCC
Q 017971 116 DAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 116 ~~~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~~~ 152 (363)
.++||+++|++|+.+ .+.|..+.+.+.+|+.+.+...
T Consensus 83 ~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 83 RGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp CSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred CcCCEEEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 999999999999876 5899999999999999988643
No 67
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.79 E-value=4.2e-19 Score=138.11 Aligned_cols=107 Identities=25% Similarity=0.544 Sum_probs=92.8
Q ss_pred CCCeEEcChhhHHH-hHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 42 DGKVIELDESNFDS-AISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 42 ~~~v~~l~~~~f~~-~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
++.+..+++++|++ +++++++++|.||++||++|+++.|.|+++++.+.+ ++.|+.+||+++++++++|+|.++||
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt 78 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG---KVRAGKVDCQAYPQTCQKAGIKAYPS 78 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCcCCHHHHHHcCCCccce
Confidence 35789999999965 557789999999999999999999999999998865 39999999999999999999999999
Q ss_pred EEEEeCCEE-EeecCC----CCHHHHHHHHHhhcCC
Q 017971 121 LKIFMHGIP-TEYYGP----RKAELLVRYLKKFVAP 151 (363)
Q Consensus 121 ~~~~~~g~~-~~y~g~----~~~~~i~~~i~~~~~~ 151 (363)
+++|.+|.. ..+.|. ++.+.|.+|+.+.+..
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 79 VKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred EEEEeCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 999976543 345554 8999999999888653
No 68
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2e-18 Score=132.15 Aligned_cols=103 Identities=22% Similarity=0.371 Sum_probs=88.3
Q ss_pred CeEEcCh-hhHHHhHcC---CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 44 KVIELDE-SNFDSAISS---FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 44 ~v~~l~~-~~f~~~l~~---~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
+|..+++ ++|++.+.+ +++++|.||++||++|+++.|.++++++.++. .++.++.+|++++++++++|+|.++|
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~P 78 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN--SNVSFLSIDADENSEISELFEISAVP 78 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG--TTSEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC--CCEEEEEEecccCHHHHHHcCCCccc
Confidence 3678887 999999976 78999999999999999999999999987643 24999999999999999999999999
Q ss_pred EEEEEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 120 TLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 120 t~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
|+++|++|+.+. +.|. ..++|.+++.+.+
T Consensus 79 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 79 YFIIIHKGTILKELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEEEETTEEEEEECSC-CHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCC-CHHHHHHHHHHHH
Confidence 999999998765 7787 4556999998765
No 69
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.78 E-value=2.3e-18 Score=132.93 Aligned_cols=100 Identities=32% Similarity=0.601 Sum_probs=90.4
Q ss_pred CeEEcCh-hhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 44 KVIELDE-SNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 44 ~v~~l~~-~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
.+.++++ ++|++.+. ++++++|.||++||++|+++.|.++++++.+ ++.++.+|++++++++++|+|.++||
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~~~~~~~~~v~~~Pt 88 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKLEETARKYNISAMPT 88 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCccHHHHHHcCCCccce
Confidence 4899998 99999996 7889999999999999999999999998765 49999999999999999999999999
Q ss_pred EEEEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 121 LKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 121 ~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
+++|++|+.+. +.| .+.+.|.+++.+.+
T Consensus 89 ~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 89 FIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 99999998764 788 68899999998753
No 70
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.78 E-value=1.5e-18 Score=155.59 Aligned_cols=106 Identities=25% Similarity=0.496 Sum_probs=98.1
Q ss_pred CCCeEEcChhhHHHhHcC--CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 42 DGKVIELDESNFDSAISS--FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~--~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
.+.|+++|+++|++.+.. +++++|.||++||++|+.+.|.|+++++.+.+ ++.|+.|||+++++++++|+|.++|
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~P 82 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG---QFILAKLDCDAEQMIAAQFGLRAIP 82 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS---SSEEEEEETTTCHHHHHTTTCCSSS
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC---CeEEEEEeCccCHHHHHHcCCCCCC
Confidence 467999999999998854 78999999999999999999999999998865 3999999999999999999999999
Q ss_pred EEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcC
Q 017971 120 TLKIFMHGIPTE-YYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 120 t~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~ 150 (363)
|+++|++|+.+. |.|..+.+.+.+|+....+
T Consensus 83 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 83 TVYLFQNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred eEEEEECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 999999998775 8999999999999999874
No 71
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.78 E-value=2.4e-18 Score=129.91 Aligned_cols=99 Identities=26% Similarity=0.583 Sum_probs=88.7
Q ss_pred EEc-ChhhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 46 IEL-DESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 46 ~~l-~~~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
..+ +.++|++.+. ++++++|.||++||++|+++.|.++++++.+.+ +.++.+|++++++++++|+|.++||++
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 78 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASESEVKSMPTFQ 78 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----SEEEEEETTTCHHHHHHTTCCBSSEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC----eEEEEEEhhhhHHHHHHcCCCcCcEEE
Confidence 344 5788999886 789999999999999999999999999987643 999999999999999999999999999
Q ss_pred EEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 123 IFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 123 ~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
+|++|+.+. +.|. +.+.+.+++.+.+
T Consensus 79 ~~~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 79 FFKKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 999998774 8888 9999999998753
No 72
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.78 E-value=3.2e-18 Score=133.09 Aligned_cols=104 Identities=24% Similarity=0.418 Sum_probs=93.7
Q ss_pred CCCeEEcChhhHHHhHc----CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCc
Q 017971 42 DGKVIELDESNFDSAIS----SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~----~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 117 (363)
.+.+..++.++|++.+. .+++++|.||++||++|+++.|.|+++++.+.+ +.|+.||++++++++++|+|.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~ 87 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDELKPIAEQFSVEA 87 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCCHHHHHHcCCCc
Confidence 45678889999999884 478999999999999999999999999987643 9999999999999999999999
Q ss_pred CCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 118 FPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 118 ~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+||+++|++|+.+ .+.|.. .+.|.+|+.+.+.
T Consensus 88 ~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 88 MPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SSEEEEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred ccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 9999999999876 488988 9999999998765
No 73
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.78 E-value=5.3e-19 Score=137.84 Aligned_cols=104 Identities=35% Similarity=0.585 Sum_probs=89.5
Q ss_pred CCeEEcChhhHHHhH-cCCCeEEEEEECCCCh--------------hhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccch
Q 017971 43 GKVIELDESNFDSAI-SSFDYILVDFYAPWCG--------------HCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS 107 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~--------------~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~ 107 (363)
+.++++++++|++.+ +++++++|.||++||+ +|+.+.|.|+++++.+.+ ++.++.+|+++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~---~~~~~~vd~d~~~ 79 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNP 79 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSCT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC---CeEEEEEECCCCH
Confidence 468999999998654 7789999999999999 999999999999987754 3999999999999
Q ss_pred hhhhhCCcCcCCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 108 RLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 108 ~l~~~~~i~~~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
+++++|+|.++||+++|++|+.+ .+.|..+.+++.+|+.+.+
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999999999999876 4899999999999998765
No 74
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.78 E-value=2.6e-18 Score=137.07 Aligned_cols=105 Identities=32% Similarity=0.631 Sum_probs=81.4
Q ss_pred CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 43 GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
+.+.++++++|++.+.+++.++|.||++||++|+.+.|.|+++++.+.+ ++.|+.||++++++++++|+|.++||++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG---RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 7899999999999886555599999999999999999999999988754 3999999999999999999999999999
Q ss_pred EEeCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 123 IFMHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 123 ~~~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+|++|+.+ .+.|..+.+.+.+|+.+.+.
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 99999876 48999999999999998765
No 75
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.78 E-value=3.9e-18 Score=132.98 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=92.2
Q ss_pred CCCeEEcChhhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-cchhhhhhCCcCcC
Q 017971 42 DGKVIELDESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-KYSRLASKQEIDAF 118 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~-~~~~l~~~~~i~~~ 118 (363)
.+.+..+++++|++.+. ++++++|.||++||++|+++.|.++++++.+. ++.++.+|++ ++++++++|+|.++
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~~~~~~vd~~~~~~~~~~~~~v~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL----DVIFLKLDCNQENKTLAKELGIRVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSTTHHHHHHHCCSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC----CCEEEEEecCcchHHHHHHcCCCee
Confidence 57899999999999885 67899999999999999999999999998764 3899999998 68999999999999
Q ss_pred CEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 119 Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
||++++++|+.+. +.|.. .+++.+++.+..
T Consensus 93 Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999998764 78876 899999998754
No 76
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.77 E-value=5.7e-18 Score=132.16 Aligned_cols=104 Identities=30% Similarity=0.532 Sum_probs=92.5
Q ss_pred CCCCeEEc-ChhhHHHhHc----CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCc
Q 017971 41 IDGKVIEL-DESNFDSAIS----SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (363)
Q Consensus 41 ~~~~v~~l-~~~~f~~~l~----~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i 115 (363)
..+.+..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+. ++.|+.+|++++++++++|+|
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v 89 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDELKSVASDWAI 89 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTSHHHHHHTTC
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHHcCC
Confidence 45678888 7799999885 47899999999999999999999999998764 499999999999999999999
Q ss_pred CcCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 116 DAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 116 ~~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
.++||+++|++|+.+. +.| .+.+.|.+++.+.+
T Consensus 90 ~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 90 QAMPTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp CSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 9999999999998764 778 58999999998764
No 77
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.77 E-value=5.2e-18 Score=127.77 Aligned_cols=99 Identities=27% Similarity=0.556 Sum_probs=88.5
Q ss_pred eEEcCh-hhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 45 VIELDE-SNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 45 v~~l~~-~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+..+++ ++|++.+. ++++++|.||++||++|+.+.|.+.++++.+. ++.++.+|++++++++++|++.++|++
T Consensus 1 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 76 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQNEEAAAKYSVTAMPTF 76 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CeecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCCHHHHHHcCCccccEE
Confidence 356666 89999996 68899999999999999999999999998764 499999999999999999999999999
Q ss_pred EEEeCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 122 KIFMHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 122 ~~~~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
++|++|+.+. +.| .+.+.+.+|+.+.
T Consensus 77 ~~~~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 77 VFIKDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 9999998764 788 6899999999875
No 78
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.77 E-value=4.6e-18 Score=137.79 Aligned_cols=105 Identities=22% Similarity=0.437 Sum_probs=93.5
Q ss_pred CCCeEEcC-hhhHHHhHcC--CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 42 DGKVIELD-ESNFDSAISS--FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 42 ~~~v~~l~-~~~f~~~l~~--~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
.+.+..++ .++|++.+++ +++++|.||++||++|+++.|.|+++++.+. ++.|+.|||+++++++++|+|.++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~ 86 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGVPEVSEKYEISSV 86 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCCHHHHHHcCCCCC
Confidence 46788887 5999999976 8999999999999999999999999998752 499999999999999999999999
Q ss_pred CEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcCC
Q 017971 119 PTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 119 Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~~ 151 (363)
|++++|.+|+.+. +.| .+.+.|.+|+.+.+..
T Consensus 87 Pt~~~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 87 PTFLFFKNSQKIDRLDG-AHAPELTKKVQRHASS 119 (153)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHHHSCT
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHHhcc
Confidence 9999999998775 667 5788999999999864
No 79
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.77 E-value=1.5e-18 Score=136.22 Aligned_cols=99 Identities=22% Similarity=0.344 Sum_probs=87.6
Q ss_pred EcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeC
Q 017971 47 ELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMH 126 (363)
Q Consensus 47 ~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~ 126 (363)
.++++.++....++++++|.||++||++|+++.|.++++++.+.+ ++.++.||++++++++++|+|.++||+++|++
T Consensus 29 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 105 (128)
T 3ul3_B 29 QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK---RIYLLKVDLDKNESLARKFSVKSLPTIILLKN 105 (128)
T ss_dssp CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEET
T ss_pred cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCCcCEEEEEEC
Confidence 444555666667889999999999999999999999999998864 39999999999999999999999999999999
Q ss_pred CEEE-eecCCCCHHHHHHHHHhh
Q 017971 127 GIPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 127 g~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
|+.+ .+.|..+.++|.+|+.++
T Consensus 106 G~~~~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 106 KTMLARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp TEEEEEESSCCCHHHHHHHHTTC
T ss_pred CEEEEEecCCCCHHHHHHHHHhC
Confidence 9876 489999999999998753
No 80
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.77 E-value=1.8e-18 Score=137.08 Aligned_cols=106 Identities=21% Similarity=0.301 Sum_probs=93.8
Q ss_pred CCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC---------ccchhhhh
Q 017971 41 IDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA---------DKYSRLAS 111 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~---------~~~~~l~~ 111 (363)
..+.+..++.++|++.+++ +++|.||++||++|+++.|.+.++++.+. +.|+.||+ ++++++++
T Consensus 14 ~~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~~~~d~~~~l~~ 86 (135)
T 3emx_A 14 EDGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGERELSAARLEMN 86 (135)
T ss_dssp ETTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ccCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhhhhhhhhHHHHH
Confidence 3578999999999999976 99999999999999999999999987542 88999999 88999999
Q ss_pred hCCcCcCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcCCCc
Q 017971 112 KQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAPDV 153 (363)
Q Consensus 112 ~~~i~~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~~~v 153 (363)
+|+|.++||+++|++|+.+. +.|..+.+.+.+++++...++-
T Consensus 87 ~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 87 KAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp HHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC----
T ss_pred HcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 99999999999999998764 8999999999999999987543
No 81
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.77 E-value=7.6e-18 Score=145.66 Aligned_cols=102 Identities=25% Similarity=0.417 Sum_probs=93.6
Q ss_pred CCeEEcChhhHHHhHcCCCeEEEEEEC--CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe-----CccchhhhhhCCc
Q 017971 43 GKVIELDESNFDSAISSFDYILVDFYA--PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD-----ADKYSRLASKQEI 115 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~~~~lv~fy~--~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd-----~~~~~~l~~~~~i 115 (363)
+.|+.|++++|++.++.+++++|.||| |||+ +.|.|+++++.+.+ .+++.|++|| |++++++|++|+|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~-~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSAS-SDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTT-CTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcC-CCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 568999999999999888999999999 9999 99999999999865 3469999999 6669999999999
Q ss_pred C--cCCEEEEEeCCE---EEeecCCCCHHHHHHHHHhhc
Q 017971 116 D--AFPTLKIFMHGI---PTEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 116 ~--~~Pt~~~~~~g~---~~~y~g~~~~~~i~~~i~~~~ 149 (363)
. ++||+++|++|. +..|.|.++.+.|.+|+.++.
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 999999999987 568999999999999999985
No 82
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.76 E-value=1.8e-18 Score=132.04 Aligned_cols=102 Identities=19% Similarity=0.264 Sum_probs=89.0
Q ss_pred eEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEE
Q 017971 45 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF 124 (363)
Q Consensus 45 v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 124 (363)
+..+++++| +.+.++++++|.||++||++|+++.|.++++++.+. ++.++.+|++++++++++|+|.++||+++|
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 455778899 777778999999999999999999999999987653 489999999999999999999999999999
Q ss_pred eCCEEE-eecCCCCHHHHHHHHHhhcCC
Q 017971 125 MHGIPT-EYYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 125 ~~g~~~-~y~g~~~~~~i~~~i~~~~~~ 151 (363)
++|+.+ ++.|..+.+.|.+++....++
T Consensus 80 ~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred ECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 999876 489999999999999887654
No 83
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.76 E-value=5.3e-18 Score=136.70 Aligned_cols=99 Identities=18% Similarity=0.262 Sum_probs=88.7
Q ss_pred cChhhHHHhH--cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEe
Q 017971 48 LDESNFDSAI--SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFM 125 (363)
Q Consensus 48 l~~~~f~~~l--~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~ 125 (363)
.+.++|++.+ +++++++|.|||+||++|+.+.|.++++++.+.+ .+.++.||++++++++++|+|.++||+++|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~---~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~ 85 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK---MAAIYLVDVDQTAVYTQYFDISYIPSTVFFF 85 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT---TEEEEEEETTTCCHHHHHTTCCSSSEEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCcCHHHHHHcCCCccCeEEEEE
Confidence 4678999988 5589999999999999999999999999987654 3999999999999999999999999999999
Q ss_pred CCEEE----------eecC-CCCHHHHHHHHHhhc
Q 017971 126 HGIPT----------EYYG-PRKAELLVRYLKKFV 149 (363)
Q Consensus 126 ~g~~~----------~y~g-~~~~~~i~~~i~~~~ 149 (363)
+|+.+ .+.| ..+.++|.+++....
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 99887 4788 888999999987764
No 84
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.76 E-value=7.6e-19 Score=140.09 Aligned_cols=111 Identities=12% Similarity=0.105 Sum_probs=81.6
Q ss_pred CeEEcChhhHHHhHcCCCeEEEEEECCC--ChhhhhHHHHHHHHHHHhhcCCCCeE--EEEEeCccchhhhhhCCcCcCC
Q 017971 44 KVIELDESNFDSAISSFDYILVDFYAPW--CGHCKRLAPQLDEAAPILAKLKEPIV--IAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 44 ~v~~l~~~~f~~~l~~~~~~lv~fy~~~--C~~C~~~~~~~~~~a~~~~~~~~~v~--~~~vd~~~~~~l~~~~~i~~~P 119 (363)
.+..+++++|++.+.+++.++|.|+++| |++|+.+.|.|+++++++ + ++. |++||++++++++++|+|.++|
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~---~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P---QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T---TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c---ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 6889999999999988888999999987 999999999999999876 3 377 9999999999999999999999
Q ss_pred EEEEEeCCEEE-eecCCCCHHHHHHHHHhhcCCCceecCC
Q 017971 120 TLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNS 158 (363)
Q Consensus 120 t~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~~~~v~~i~~ 158 (363)
|+++|++|+.+ ++.|.++.+.|.+|+.+.+..+...++.
T Consensus 94 T~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~~ 133 (142)
T 2es7_A 94 ATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQETV 133 (142)
T ss_dssp EEEEESCC----CEESCCCHHHHHHHHHHHHC--------
T ss_pred eEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCCc
Confidence 99999999876 4899999999999999999877776654
No 85
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.76 E-value=2.9e-16 Score=150.96 Aligned_cols=296 Identities=13% Similarity=0.177 Sum_probs=222.6
Q ss_pred CCeEEc-ChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l-~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
..+..+ +.++++++++.++.++|.|+.++|. ...+.|.++|+.+.+. +.|+.++ +.++++++++...| +
T Consensus 110 ~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~---~~~~~f~~~a~~~~~~---~~F~~~~---~~~~~~~~~v~~~~-i 179 (481)
T 3f8u_A 110 PASVPLRTEEEFKKFISDKDASIVGFFDDSFS---EAHSEFLKAASNLRDN---YRFAHTN---VESLVNEYDDNGEG-I 179 (481)
T ss_dssp CSEEEECSHHHHHHHTTSSSCEEEEEESCTTC---HHHHHHHHHHHHHTTT---SCEEEEC---CHHHHHHHCSSSEE-E
T ss_pred cCceecCCHHHHHHHHhcCCcEEEEEECCCcc---chHHHHHHHHHHhccC---ceEEEEC---CHHHHHHhCCCCCc-E
Confidence 456777 6788999998889999999998866 4468899999988654 7888764 67899999999876 7
Q ss_pred EEEe--------CCEEEeec-CCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeec-C----Ch----
Q 017971 122 KIFM--------HGIPTEYY-GPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG-L----DE---- 183 (363)
Q Consensus 122 ~~~~--------~g~~~~y~-g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~-~----~~---- 183 (363)
++|+ ++..+.|. |..+.+.|.+|+.....|.+.+++... +..+.+ . ++++.|. . ..
T Consensus 180 ~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n-~~~~~~-~----~~~v~~~~~~~~~~~~~~~ 253 (481)
T 3f8u_A 180 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDN-KDLIQG-K----DLLIAYYDVDYEKNAKGSN 253 (481)
T ss_dssp EEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTT-HHHHTT-S----SEEEEEECCCTTTCHHHHH
T ss_pred EEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhH-HHHhcC-C----CceEEEEecccccchhhHH
Confidence 7887 34567898 889999999999999999999998754 666653 2 2333332 1 11
Q ss_pred ---hHHHHHHHHhhhh---hHHHHh-hhcchhhhhhcCCC----CCCeEEEEcCCCCCcccccCCCCHH--HHHHHHHhh
Q 017971 184 ---SVMSNLALKYKKK---AWFAVA-KDFSEDTMVLYDFD----KVPALVALQPSYNEHNIFYGPFDEE--FLEEFIKQN 250 (363)
Q Consensus 184 ---~~~~~~a~~~~~~---~~~~~~-~~~~~~~~~~~~~~----~~p~iv~~~~~~~~~~~~~g~~~~~--~l~~fi~~~ 250 (363)
+.+.++|..+++. ..|..+ ..........+|+. ..|.++++. ..+....+.+.++.+ .|.+|+.+.
T Consensus 254 ~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~-~~~~ky~~~~~~t~e~~~l~~f~~~~ 332 (481)
T 3f8u_A 254 YWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRT-AKGEKFVMQEEFSRDGKALERFLQDY 332 (481)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEEC-SSSCEEECCSCCCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEc-CCCcccCCCcccCccHHHHHHHHHHH
Confidence 2256788888886 555543 12234456788987 579988886 334455666888888 999999775
Q ss_pred c-----------------CCCcccCChhhHHhhhcC-CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC---cEEEEEe
Q 017971 251 F-----------------LPLSVPINQDTLNLLKDD-KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVG 309 (363)
Q Consensus 251 ~-----------------~p~~~~lt~~~~~~l~~~-~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~---~~f~~vd 309 (363)
. ...+..++..++..+..+ ++++++.|+ ..-....+.+...+.++++.+++ +.|+.+|
T Consensus 333 ~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id 411 (481)
T 3f8u_A 333 FDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMD 411 (481)
T ss_dssp HHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEE
T ss_pred hcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEE
Confidence 1 112446677888875544 667777666 44677788899999999998765 9999999
Q ss_pred ccCchhHHhhcCCCCCCCCCeEEEEeCCCC--eeEEEEEEeehhhhhHhhhhh
Q 017971 310 IKQFADFADTFEANKKSKLPKMVVWDGNEN--YLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 310 ~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~--y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+..+ .+.+.+++ ...|++++++.+++ .....|....+.+..|+...+
T Consensus 412 ~~~~-~~~~~~~v---~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 460 (481)
T 3f8u_A 412 ATAN-DVPSPYEV---RGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA 460 (481)
T ss_dssp TTSS-CCCTTCCC---CSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHC
T ss_pred CCch-hhHhhCCC---cccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhc
Confidence 9876 67788888 68999999998876 677888888999999987654
No 86
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.76 E-value=6.8e-18 Score=129.67 Aligned_cols=100 Identities=27% Similarity=0.521 Sum_probs=87.8
Q ss_pred CCeEEcC-hhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIELD-ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l~-~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
+.+..++ .++|+++++++++++|.||++||++|+++.|.++++++.+.+ +.|+.+|++++++++++|+|.++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~~~~l~~~~~v~~~Pt~ 87 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDESPDIAKECEVTAMPTF 87 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSBSEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHCCCCcccEE
Confidence 4455554 466788888889999999999999999999999999987643 99999999999999999999999999
Q ss_pred EEEeCCEEE-eecCCCCHHHHHHHHHh
Q 017971 122 KIFMHGIPT-EYYGPRKAELLVRYLKK 147 (363)
Q Consensus 122 ~~~~~g~~~-~y~g~~~~~~i~~~i~~ 147 (363)
++|++|+.+ .+.|.. .+.|.+++.+
T Consensus 88 ~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred EEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 999999876 488988 9999999875
No 87
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.75 E-value=1.7e-17 Score=128.04 Aligned_cols=105 Identities=25% Similarity=0.529 Sum_probs=93.0
Q ss_pred CCCeEEc-ChhhHHHhHcC----CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcC
Q 017971 42 DGKVIEL-DESNFDSAISS----FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (363)
Q Consensus 42 ~~~v~~l-~~~~f~~~l~~----~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 116 (363)
.+.++.+ +.++|++.+.. +++++|.||++||++|+++.|.++++++.+. ++.++.+|++++++++++|++.
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~ 80 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDELKDVAEAYNVE 80 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCC
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccCHHHHHHcCCC
Confidence 4678888 57999998854 7899999999999999999999999998764 3999999999999999999999
Q ss_pred cCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcCC
Q 017971 117 AFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 117 ~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~~ 151 (363)
++|++++|++|+.+. +.| .+.+.+.+++.+.+..
T Consensus 81 ~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 81 AMPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp SBSEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred cCcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999998765 677 5899999999988754
No 88
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.75 E-value=7e-18 Score=131.05 Aligned_cols=106 Identities=25% Similarity=0.467 Sum_probs=93.7
Q ss_pred CCCCeEEcCh-hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 41 IDGKVIELDE-SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 41 ~~~~v~~l~~-~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
....+..+++ ++|++.++++++++|.||++||++|+.+.|.++++++.+.+. ++.++.+|++++++++++|+|.++|
T Consensus 13 ~~~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~v~~~~vd~d~~~~~~~~~~v~~~P 90 (121)
T 2j23_A 13 PRGSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD--KVGFYKVDVDEQSQIAQEVGIRAMP 90 (121)
T ss_dssp CCCCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH--HSEEEEEETTTCHHHHHHHTCCSSS
T ss_pred CCcceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC--cEEEEEEECcCCHHHHHHcCCCccc
Confidence 3456777766 889999988899999999999999999999999998876543 3899999999999999999999999
Q ss_pred EEEEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 120 TLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 120 t~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
|+++|++|+.+ .+.|. +.+.|.+|+.+.+
T Consensus 91 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 91 TFVFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 99999999876 48888 9999999998764
No 89
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=3.4e-19 Score=141.73 Aligned_cols=105 Identities=19% Similarity=0.369 Sum_probs=90.6
Q ss_pred CCCeEEcChhhHHHhHcCCC--eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcC---
Q 017971 42 DGKVIELDESNFDSAISSFD--YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID--- 116 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~--~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~--- 116 (363)
.+.+..+++++|++.+.+++ +++|.||++||++|+++.|.|+++++.+.+ .++.|+.|||+++++++++|+|.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~--~~v~~~~vd~~~~~~~~~~~~v~~~~ 83 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC--TGLNFGKVDVGRYTDVSTRYKVSTSP 83 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS--SSCEEEECCTTTCHHHHHHTTCCCCS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCccCHHHHHHccCcccC
Confidence 45699999999999985544 899999999999999999999999998853 24999999999999999999999
Q ss_pred ---cCCEEEEEeCCEEE-eecCCCCHHHHHHHHHhh
Q 017971 117 ---AFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 117 ---~~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
++||+++|++|+.+ .+.|..+.+.|.+|+.+.
T Consensus 84 ~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SSSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred CcCCCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 99999999999866 488888777766665443
No 90
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.75 E-value=2.5e-18 Score=132.91 Aligned_cols=102 Identities=11% Similarity=0.088 Sum_probs=86.0
Q ss_pred CCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe----CccchhhhhhCCcCc
Q 017971 42 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD----ADKYSRLASKQEIDA 117 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd----~~~~~~l~~~~~i~~ 117 (363)
-..+..++.++|++.+.++++++|.||++||++|+++.|.++++++.+.. .+.++.++ ++++++++++|+|.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~i~~ 87 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEEPSQLNDLQAFRSRYGIPT 87 (118)
T ss_dssp TTTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTCGGGHHHHHHHHHHHTCCS
T ss_pred HhhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCCcCcHHHHHHHHHHcCCCC
Confidence 34678899999999998889999999999999999999999999987642 36555332 233468999999999
Q ss_pred CCEEEEEeCCEEE-eecCCCCHHHHHHHHH
Q 017971 118 FPTLKIFMHGIPT-EYYGPRKAELLVRYLK 146 (363)
Q Consensus 118 ~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~ 146 (363)
+||+++|++|+.+ .+.|..+.+.|.+|+.
T Consensus 88 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 88 VPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp SCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred CCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 9999999999876 4899999999999985
No 91
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.75 E-value=2e-17 Score=127.28 Aligned_cols=99 Identities=15% Similarity=0.275 Sum_probs=82.4
Q ss_pred CCeEEcChhhHHHhHcC-CC--eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 43 GKVIELDESNFDSAISS-FD--YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~-~~--~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
+.+.++++++|.+.+.+ ++ +++|.|||+||++|+.+.|.++++|+++. ++.|++||+++. +++|+|.+.|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~----~v~f~kvd~d~~---~~~~~v~~~P 75 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP----ETKFVKAIVNSC---IQHYHDNCLP 75 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT----TSEEEEEEGGGT---STTCCGGGCS
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC----CCEEEEEEhHHh---HHHCCCCCCC
Confidence 46889999999997743 33 89999999999999999999999998764 399999999875 5899999999
Q ss_pred EEEEEeCCEEEe-ecCC-------CCHHHHHHHHHhh
Q 017971 120 TLKIFMHGIPTE-YYGP-------RKAELLVRYLKKF 148 (363)
Q Consensus 120 t~~~~~~g~~~~-y~g~-------~~~~~i~~~i~~~ 148 (363)
|+++|++|+.+. +.|. .+.+.|..++.+.
T Consensus 76 T~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 76 TIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999998774 5554 3566666666543
No 92
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.74 E-value=1.4e-17 Score=127.47 Aligned_cols=103 Identities=27% Similarity=0.488 Sum_probs=91.3
Q ss_pred CCCeEEc-ChhhHHHhHcC----CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcC
Q 017971 42 DGKVIEL-DESNFDSAISS----FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEID 116 (363)
Q Consensus 42 ~~~v~~l-~~~~f~~~l~~----~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 116 (363)
.+.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. ++.+..+|++++++++++|++.
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~~v~ 78 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELKAVAEEWNVE 78 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTCHHHHHHHHCS
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccccHHHHHhCCCC
Confidence 4568888 67999998854 7899999999999999999999999998764 4999999999999999999999
Q ss_pred cCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 117 AFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 117 ~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
++|++++|++|+.+. +.| .+.+.+.+++.+.+
T Consensus 79 ~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 79 AMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp STTEEEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred cccEEEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999999998765 677 68889999998765
No 93
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.74 E-value=2.3e-17 Score=131.29 Aligned_cols=106 Identities=23% Similarity=0.423 Sum_probs=92.6
Q ss_pred CCCCeEEcC-hhhHHHhHc----CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCc
Q 017971 41 IDGKVIELD-ESNFDSAIS----SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (363)
Q Consensus 41 ~~~~v~~l~-~~~f~~~l~----~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i 115 (363)
..+.+..++ .++|++.+. ++++++|.||++||++|+.+.|.++++++.+. ++.|+.||++++++++++|+|
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~~~~~~~~~v 97 (139)
T 3d22_A 22 AGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDELSDFSASWEI 97 (139)
T ss_dssp SCTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTC
T ss_pred cCCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcccHHHHHHcCC
Confidence 345677775 799999873 57899999999999999999999999998763 399999999999999999999
Q ss_pred CcCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcCC
Q 017971 116 DAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 116 ~~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~~ 151 (363)
.++||+++|++|+.+. +.|. +.+.|.+++.+.+..
T Consensus 98 ~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 98 KATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp CEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred CcccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999999999998764 7887 899999999888653
No 94
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.74 E-value=2.8e-17 Score=131.35 Aligned_cols=97 Identities=16% Similarity=0.163 Sum_probs=81.5
Q ss_pred ChhhHHHhHc--CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeC
Q 017971 49 DESNFDSAIS--SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMH 126 (363)
Q Consensus 49 ~~~~f~~~l~--~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~ 126 (363)
+.++|++.+. ++++++|.|||+||++|+.+.|.++++++.+.+ ++.|+.||++++++++++|+|.++||+++|++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~ 86 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITEVPDFNKMYELYDPCTVMFFFR 86 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTCCTTTTSSCSCSSCEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CeEEEEEccccCHHHHHHcCCCCCCEEEEEEC
Confidence 5788988763 578999999999999999999999999988754 39999999999999999999999999999999
Q ss_pred CEEEe----------ecCCCC-HHHHHHHHHhh
Q 017971 127 GIPTE----------YYGPRK-AELLVRYLKKF 148 (363)
Q Consensus 127 g~~~~----------y~g~~~-~~~i~~~i~~~ 148 (363)
|+.+. ..|..+ .+++.+++.+.
T Consensus 87 G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp TEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 98764 234443 66666666554
No 95
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.73 E-value=9.3e-18 Score=131.27 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=90.6
Q ss_pred eEEcChhhHH-----HhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe--CccchhhhhhCCcCc
Q 017971 45 VIELDESNFD-----SAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD--ADKYSRLASKQEIDA 117 (363)
Q Consensus 45 v~~l~~~~f~-----~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd--~~~~~~l~~~~~i~~ 117 (363)
+..++..+++ ....++++++|.||++||++|+++.|.+.++++.+. .++.++.|| ++++++++++|+|.+
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~---~~v~~~~v~~~~d~~~~~~~~~~v~~ 82 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE---GKFNIYYARLEEEKNIDLAYKYDANI 82 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS---SSCEEEEEETTSSHHHHHHHHTTCCS
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc---CCeEEEEEeCCCCchHHHHHHcCCcc
Confidence 3445555555 555677899999999999999999999999998875 349999999 999999999999999
Q ss_pred CCEEEEEe-CCEEE-eecCCCCHHHHHHHHHhhcCCC
Q 017971 118 FPTLKIFM-HGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 118 ~Pt~~~~~-~g~~~-~y~g~~~~~~i~~~i~~~~~~~ 152 (363)
+|++++|. +|+.+ .+.|..+.+.|.+++.+...+.
T Consensus 83 ~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 83 VPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred eeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 99999998 78765 5899999999999999987654
No 96
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.72 E-value=6.6e-17 Score=124.92 Aligned_cols=105 Identities=24% Similarity=0.435 Sum_probs=88.0
Q ss_pred CCeEEc--ChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 43 GKVIEL--DESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 43 ~~v~~l--~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
+.+..+ +.++|++.+ +++++++|.||++||++|+.+.|.++++++.+ .++.|+.||++++++++++|+|.++|
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~----~~v~~~~vd~~~~~~~~~~~~i~~~P 78 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN----KDVTFIKVDVDKNGNAADAYGVSSIP 78 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC----CCeEEEEEECCCCHHHHHhcCCCCCC
Confidence 346777 678998654 67889999999999999999999999999876 24999999999999999999999999
Q ss_pred EEEEEeC----CEEEe-ecCCCCHHHHHHHHHhhcCCC
Q 017971 120 TLKIFMH----GIPTE-YYGPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 120 t~~~~~~----g~~~~-y~g~~~~~~i~~~i~~~~~~~ 152 (363)
++++|++ |+.+. +.|..+ ++|.+.+.++..++
T Consensus 79 t~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 79 ALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC---
T ss_pred EEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhcc
Confidence 9999988 77664 778664 56999998887653
No 97
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.72 E-value=2.8e-17 Score=129.90 Aligned_cols=106 Identities=20% Similarity=0.427 Sum_probs=91.2
Q ss_pred cCCCCCeEEcCh-hhHHHhHcC--CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCc
Q 017971 39 FKIDGKVIELDE-SNFDSAISS--FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEI 115 (363)
Q Consensus 39 ~~~~~~v~~l~~-~~f~~~l~~--~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i 115 (363)
....+.++++++ ++|++.+.+ +++++|.||++||++|+++.|.++++++.+ ++.++.||++++++++++|+|
T Consensus 16 ~~~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~~l~~~~~v 90 (133)
T 3cxg_A 16 FQGQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIHPKLNDQHNI 90 (133)
T ss_dssp EETTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTCHHHHHHTTC
T ss_pred ccCCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccchHHHHHhcCC
Confidence 334567899986 889998854 469999999999999999999999988654 389999999999999999999
Q ss_pred CcCCEEEEEe--CCE--EE-eecCCCCHHHHHHHHHhhcC
Q 017971 116 DAFPTLKIFM--HGI--PT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 116 ~~~Pt~~~~~--~g~--~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
.++||+++|+ +|+ .+ .+.|. +.+.|.+++.+.+.
T Consensus 91 ~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 91 KALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred CCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9999999997 887 44 47787 89999999988764
No 98
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.71 E-value=1e-16 Score=139.86 Aligned_cols=193 Identities=13% Similarity=0.103 Sum_probs=135.2
Q ss_pred hhHHHhHc-CCCeEEEEEECCC--ChhhhhHHHHHHHHHHHhhcCCCC--eEEEEEeCccchhhhhhCCcCcCCEEEEEe
Q 017971 51 SNFDSAIS-SFDYILVDFYAPW--CGHCKRLAPQLDEAAPILAKLKEP--IVIAKVDADKYSRLASKQEIDAFPTLKIFM 125 (363)
Q Consensus 51 ~~f~~~l~-~~~~~lv~fy~~~--C~~C~~~~~~~~~~a~~~~~~~~~--v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~ 125 (363)
+.+++++. -.++++|.||++| |++|+.+.|.++++|+......++ +.|+.+|+++++++|++|+|.++||+.+|
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 34555663 3479999999999 999999999999999864221222 99999999999999999999999999999
Q ss_pred CCEEEeecCCCCHHHHHHHHHhhcC--CCceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHHhh-
Q 017971 126 HGIPTEYYGPRKAELLVRYLKKFVA--PDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALKYK- 194 (363)
Q Consensus 126 ~g~~~~y~g~~~~~~i~~~i~~~~~--~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~a~~~~- 194 (363)
+| ...|.|.++.+.+.+|+..... .....+ ++..++. +.+.... ++++.|+..+ +.+..++..+.
T Consensus 94 ~g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~-~~~~~~~-~~vv~F~a~wC~~C~~~~p~l~~la~~~~~ 169 (243)
T 2hls_A 94 GG-EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEA-LKSLKGR-VHIETIITPSCPYCPYAVLLAHMFAYEAWK 169 (243)
T ss_dssp TT-TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHH-HHHCCSC-EEEEEEECSSCSSHHHHHHHHHHHHHHHHH
T ss_pred CC-ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHH-HHHcCCC-cEEEEEECCCCCCcHHHHHHHHHHHHHccc
Confidence 67 7789999888899999877642 112223 3333433 3332222 4555555332 33555666552
Q ss_pred ---hhhHHH-HhhhcchhhhhhcCCCCCCeEEEEcCCCCCcccccCCCCHHHHHHHHHhhcCC
Q 017971 195 ---KKAWFA-VAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP 253 (363)
Q Consensus 195 ---~~~~~~-~~~~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p 253 (363)
....+. +..+..++++..|++.++|++++ + +. ..+.|..+.++|.+||.+..-+
T Consensus 170 ~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~--G~-~~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 170 QGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--N--GY-LVFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp TTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--T--TE-EEEESCCCHHHHHHHHHHHHTT
T ss_pred ccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--C--CE-EEEeCCCCHHHHHHHHHHHhhc
Confidence 112221 11234567888999999999877 2 33 3488999999999999987533
No 99
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=1.3e-16 Score=126.33 Aligned_cols=101 Identities=15% Similarity=0.219 Sum_probs=86.5
Q ss_pred CCCeEEcChhhHHHhHcC---CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcC
Q 017971 42 DGKVIELDESNFDSAISS---FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAF 118 (363)
Q Consensus 42 ~~~v~~l~~~~f~~~l~~---~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 118 (363)
.+.+..++.++|.+.+.+ +++++|.||++||++|+.+.|.|+++++.+. ++.|+.||++++. ++|+|.++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~~---~~~~i~~~ 81 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSCI---EHYHDNCL 81 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSSC---SSCCSSCC
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcCc---ccCCCCCC
Confidence 467999999999998853 2689999999999999999999999998763 4999999999875 78999999
Q ss_pred CEEEEEeCCEEEe-ecCCC-------CHHHHHHHHHhhc
Q 017971 119 PTLKIFMHGIPTE-YYGPR-------KAELLVRYLKKFV 149 (363)
Q Consensus 119 Pt~~~~~~g~~~~-y~g~~-------~~~~i~~~i~~~~ 149 (363)
||+++|++|+.+. +.|.. +.+.|.+++.++.
T Consensus 82 Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 82 PTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred CEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 9999999997654 66754 7888888888763
No 100
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.69 E-value=1.5e-16 Score=137.32 Aligned_cols=105 Identities=19% Similarity=0.224 Sum_probs=91.8
Q ss_pred eEEcChhhHHHhHcCCCeE-EEEEECCCChhhhhHHHHHHHHHHHhhcC-CCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 45 VIELDESNFDSAISSFDYI-LVDFYAPWCGHCKRLAPQLDEAAPILAKL-KEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 45 v~~l~~~~f~~~l~~~~~~-lv~fy~~~C~~C~~~~~~~~~~a~~~~~~-~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
+..+++++++++.+.++++ +|.||++||++|+++.|.|.++++.+.+. ..++.++.|||+++++++++|+|.++||++
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 197 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIV 197 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEE
Confidence 4567889998887666666 99999999999999999999999988621 124999999999999999999999999999
Q ss_pred EEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 123 IFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 123 ~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
+|++|+.. .|.|.++.+.|.+|+.+.+
T Consensus 198 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 198 IQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 99999765 5899999999999998764
No 101
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.51 E-value=2e-18 Score=130.33 Aligned_cols=102 Identities=33% Similarity=0.623 Sum_probs=90.4
Q ss_pred CeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 44 KVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 44 ~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
.+.++++++|++.+ +++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++++++++++|++.++|+++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 2yj7_A 2 SVIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG---KVKVVKVNVDENPNTAAQYGIRSIPTLL 78 (106)
Confidence 36788999998765 6778999999999999999999999999987754 4999999999999999999999999999
Q ss_pred EEeCCEEE-eecCCCCHHHHHHHHHhh
Q 017971 123 IFMHGIPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 123 ~~~~g~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
+|++|+.+ .+.|..+.+.+.+|+.+.
T Consensus 79 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 99888765 588999999999988764
No 102
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.68 E-value=7.5e-18 Score=157.99 Aligned_cols=111 Identities=23% Similarity=0.329 Sum_probs=93.1
Q ss_pred cCCCCCeEEcChhhHHHhHcCC--CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCC-----CeEEEEEeCccchhhhh
Q 017971 39 FKIDGKVIELDESNFDSAISSF--DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKE-----PIVIAKVDADKYSRLAS 111 (363)
Q Consensus 39 ~~~~~~v~~l~~~~f~~~l~~~--~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~-----~v~~~~vd~~~~~~l~~ 111 (363)
+...+.|+.|++++|++.+.++ ++++|.|||+||++|+++.|.|+++++.+..... .+.|+.|||++++++|+
T Consensus 19 ~~~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~ 98 (470)
T 3qcp_A 19 FHLDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCR 98 (470)
T ss_dssp CTTCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHH
T ss_pred cCCCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHH
Confidence 4457889999999999988543 7899999999999999999999999998864322 59999999999999999
Q ss_pred hCCcCcCCEEEEEeCCE---EEeecCCCCHHHHHHHHHhhcC
Q 017971 112 KQEIDAFPTLKIFMHGI---PTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 112 ~~~i~~~Pt~~~~~~g~---~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
+|+|.++||+++|.+|. ...|.|.++.+.| +|+.+++.
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l~ 139 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHLE 139 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTCC
T ss_pred HcCCCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhcC
Confidence 99999999999997553 3468898777766 66655553
No 103
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.4e-16 Score=125.19 Aligned_cols=105 Identities=28% Similarity=0.450 Sum_probs=89.3
Q ss_pred eEEcChhhHHHhH----cCCCeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeCc--cchhhhhhCCc
Q 017971 45 VIELDESNFDSAI----SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDAD--KYSRLASKQEI 115 (363)
Q Consensus 45 v~~l~~~~f~~~l----~~~~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~~i 115 (363)
.+.+++.+|++.+ .++++++|.||++||++|+++.|.+ .++++.+... +.++.+|++ .+..++++|+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~~~v 84 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGEGVELRKKYGV 84 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTTHHHHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcchHHHHHHcCC
Confidence 4556778888877 3678999999999999999999999 7777666543 889999998 57899999999
Q ss_pred CcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcCCC
Q 017971 116 DAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 116 ~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~~~ 152 (363)
.++|++++| ++|+.+ .+.|..+.+.+.+++.+...++
T Consensus 85 ~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 85 HAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 999999999 578765 5899999999999999987654
No 104
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.67 E-value=2e-15 Score=130.47 Aligned_cols=193 Identities=13% Similarity=0.123 Sum_probs=148.3
Q ss_pred CeEEc-ChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 44 KVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 44 ~v~~l-~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
.++.| +.+++++++++++.++|.|+++| |..+.++|.++|+.+. ++.|+... ++++|+++++.+ |+++
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~----~~~F~~t~---~~~v~~~~~v~~-p~i~ 78 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFP----GVSFGIST---DSEVLTHYNITG-NTIC 78 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCT----TSEEEEEC---CHHHHHHTTCCS-SEEE
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCC----CceEEEEC---CHHHHHHcCCCC-CeEE
Confidence 34555 66999999999999999999998 5689999999998873 38888754 788999999998 9999
Q ss_pred EEeCC--EEEeecC----CCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecC-C---h----hHHHH
Q 017971 123 IFMHG--IPTEYYG----PRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGL-D---E----SVMSN 188 (363)
Q Consensus 123 ~~~~g--~~~~y~g----~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~-~---~----~~~~~ 188 (363)
+|+++ ....|.| .++.+.|.+|+.....|.+.+++. .++.++.+.... .+++.|.. . . +.+++
T Consensus 79 lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~-~n~~~~~~~~~~--~~~l~f~~~~~~~~~~~~~~~~~ 155 (227)
T 4f9z_D 79 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNP-VTVIGLFNSVIQ--IHLLLIMNKASPEYEENMHRYQK 155 (227)
T ss_dssp EEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCH-HHHHHHHHSSCC--EEEEEEECTTSTTHHHHHHHHHH
T ss_pred EEEecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCc-ccHHHHhccCCc--eEEEEEEcCCcchHHHHHHHHHH
Confidence 99973 5667874 899999999999999999999976 457787765532 23344422 1 1 34778
Q ss_pred HHHHhhhhhHHHHhhh---cchhhhhhcCCC--CCCeEEEEcCCCCCcccc-cCCCCHHHHHHHHHhh
Q 017971 189 LALKYKKKAWFAVAKD---FSEDTMVLYDFD--KVPALVALQPSYNEHNIF-YGPFDEEFLEEFIKQN 250 (363)
Q Consensus 189 ~a~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~p~iv~~~~~~~~~~~~-~g~~~~~~l~~fi~~~ 250 (363)
+|+.+++...|..+.. ....+...+|+. ..|+++++....+....+ .+.++.+.|.+|+++.
T Consensus 156 vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 156 AAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 8999988766655422 133567889998 789999998654433333 3789999999999874
No 105
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.67 E-value=1.6e-16 Score=135.93 Aligned_cols=102 Identities=22% Similarity=0.314 Sum_probs=88.3
Q ss_pred CCCeEEc-ChhhHHHhHcCC---CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCc
Q 017971 42 DGKVIEL-DESNFDSAISSF---DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (363)
Q Consensus 42 ~~~v~~l-~~~~f~~~l~~~---~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 117 (363)
.+.|..+ +.++|.+.+.+. ++++|.||++||++|+.+.|.|.++++.+. .+.|+.||++ ++.++++|+|.+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~-~~~l~~~~~i~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS-NTGAGDRFSSDV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH-HHTCSTTSCGGG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC-cHHHHHHCCCCC
Confidence 4678999 899999988443 799999999999999999999999998763 4999999999 889999999999
Q ss_pred CCEEEEEeCCEEE-eecCCCC-------HHHHHHHHHhh
Q 017971 118 FPTLKIFMHGIPT-EYYGPRK-------AELLVRYLKKF 148 (363)
Q Consensus 118 ~Pt~~~~~~g~~~-~y~g~~~-------~~~i~~~i~~~ 148 (363)
+||+++|++|+.+ .+.|..+ .+.|.+|+.++
T Consensus 173 ~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 LPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9999999999876 4777665 37788887765
No 106
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.66 E-value=3.5e-16 Score=151.26 Aligned_cols=111 Identities=34% Similarity=0.594 Sum_probs=97.4
Q ss_pred CCCCeEEcChhhHHHhH-cCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCC
Q 017971 41 IDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFP 119 (363)
Q Consensus 41 ~~~~v~~l~~~~f~~~l-~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 119 (363)
.++.|..|++++|++.+ +.+++++|.||||||++|+.+.|.|+++++.+.....++.++.+||+.+... + |+|.++|
T Consensus 356 ~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~P 433 (504)
T 2b5e_A 356 QDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYP 433 (504)
T ss_dssp CSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSS
T ss_pred ccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecC
Confidence 45789999999999987 5678999999999999999999999999998873344699999999988754 4 9999999
Q ss_pred EEEEEeCCE---EEeecCCCCHHHHHHHHHhhcCCCc
Q 017971 120 TLKIFMHGI---PTEYYGPRKAELLVRYLKKFVAPDV 153 (363)
Q Consensus 120 t~~~~~~g~---~~~y~g~~~~~~i~~~i~~~~~~~v 153 (363)
|+++|++|+ ...|.|.++.+.|.+|+.++....+
T Consensus 434 t~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 434 TIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp EEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred eEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 999999885 4579999999999999999987654
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.64 E-value=6e-16 Score=122.31 Aligned_cols=99 Identities=20% Similarity=0.329 Sum_probs=84.7
Q ss_pred cChhhHHHhHcC--CCeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeC----ccchhhhhhCCcCcC
Q 017971 48 LDESNFDSAISS--FDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDA----DKYSRLASKQEIDAF 118 (363)
Q Consensus 48 l~~~~f~~~l~~--~~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~----~~~~~l~~~~~i~~~ 118 (363)
.+.++++..+.+ +++++|.||++||++|+++.|.+ .++++.++ ++.++.||+ +.+.+++++|+|.++
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~----~~~~~~vd~~~~~~~~~~l~~~~~v~~~ 92 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA----DTVLLQANVTANDAQDVALLKHLNVLGL 92 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT----TSEEEEEECTTCCHHHHHHHHHTTCCSS
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc----CcEEEEEeCCCCcchHHHHHHHcCCCCC
Confidence 356778887743 78999999999999999999999 88887764 299999999 667899999999999
Q ss_pred CEEEEE-eCCEEE---eecCCCCHHHHHHHHHhhcC
Q 017971 119 PTLKIF-MHGIPT---EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 119 Pt~~~~-~~g~~~---~y~g~~~~~~i~~~i~~~~~ 150 (363)
|++++| ++|+.+ .+.|..+.+.|.+++.+..+
T Consensus 93 Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 93 PTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp SEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred CEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 999999 788875 68999999999999987654
No 108
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.64 E-value=7.8e-16 Score=121.49 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=93.6
Q ss_pred eEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCc--CCEEE
Q 017971 45 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA--FPTLK 122 (363)
Q Consensus 45 v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~--~Pt~~ 122 (363)
+.++|+++|++.++.+.+++|.||++ |++|+.+.|.++++|+++++. +.|+.+|.++++.++++|||.+ .||++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk---~~f~~vd~d~~~~~a~~~gi~~~~iPtl~ 83 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV---INFGTIDAKAFGAHAGNLNLKTDKFPAFA 83 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT---SEEEEECTTTTGGGTTTTTCCSSSSSEEE
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe---EEEEEEchHHhHHHHHHcCCCcccCCEEE
Confidence 78999999999988888999999999 899999999999999987654 9999999999999999999999 99999
Q ss_pred EEeC--CEEEeec--CCCCHHHHHHHHHhhcCCC
Q 017971 123 IFMH--GIPTEYY--GPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 123 ~~~~--g~~~~y~--g~~~~~~i~~~i~~~~~~~ 152 (363)
+|++ |+.+... |..+.+.|.+|+.+++...
T Consensus 84 i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 84 IQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp EECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred EEecCcCcccCCCCccccCHHHHHHHHHHHHcCC
Confidence 9987 7666554 9999999999999887533
No 109
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.64 E-value=8.7e-16 Score=111.01 Aligned_cols=82 Identities=26% Similarity=0.378 Sum_probs=74.8
Q ss_pred CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHH
Q 017971 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (363)
Q Consensus 61 ~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~ 140 (363)
.+.+|.||++||++|+++.|.++++++.+.+ ++.+..+|++++++++++|++.++|++++ +|+. .+.|..+.+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCCHHH
Confidence 4689999999999999999999999987753 49999999999999999999999999998 8877 8899889999
Q ss_pred HHHHHHhh
Q 017971 141 LVRYLKKF 148 (363)
Q Consensus 141 i~~~i~~~ 148 (363)
+.+++.+.
T Consensus 77 l~~~l~~~ 84 (85)
T 1fo5_A 77 LVEAIKKR 84 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999875
No 110
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.64 E-value=1.1e-15 Score=132.34 Aligned_cols=103 Identities=20% Similarity=0.261 Sum_probs=87.8
Q ss_pred CCCeEEc-ChhhHHHhHc---CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCc
Q 017971 42 DGKVIEL-DESNFDSAIS---SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDA 117 (363)
Q Consensus 42 ~~~v~~l-~~~~f~~~l~---~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 117 (363)
.+.|..+ +.++|.+.+. .+++++|.||++||++|+.+.|.|.++++.+. .+.|+.||+++ +.++++|+|.+
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~----~v~f~kVd~d~-~~l~~~~~I~~ 185 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP----MVKFCKIKASN-TGAGDRFSSDV 185 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT----TSEEEEEEHHH-HCCTTSSCTTT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CCEEEEEeCCc-HHHHHHCCCCC
Confidence 4678999 7899999984 36899999999999999999999999998764 39999999987 78999999999
Q ss_pred CCEEEEEeCCEEEe-ecCC-------CCHHHHHHHHHhhc
Q 017971 118 FPTLKIFMHGIPTE-YYGP-------RKAELLVRYLKKFV 149 (363)
Q Consensus 118 ~Pt~~~~~~g~~~~-y~g~-------~~~~~i~~~i~~~~ 149 (363)
+||+++|++|+.+. +.|. .+.+.|..|+.++.
T Consensus 186 ~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 186 LPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred CCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 99999999998763 4442 45677888887763
No 111
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.63 E-value=1.4e-15 Score=120.00 Aligned_cols=93 Identities=20% Similarity=0.380 Sum_probs=79.9
Q ss_pred HHHhHcCCCeEEEEEECCCChhhhhHHHHHH--HHHHHhhcCCCCeEEEEEeC---ccchhhhhhCCc---CcCCEEEEE
Q 017971 53 FDSAISSFDYILVDFYAPWCGHCKRLAPQLD--EAAPILAKLKEPIVIAKVDA---DKYSRLASKQEI---DAFPTLKIF 124 (363)
Q Consensus 53 f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~--~~a~~~~~~~~~v~~~~vd~---~~~~~l~~~~~i---~~~Pt~~~~ 124 (363)
+.....++++++|.||++||++|+.+.|.|. ++++.+.+. +.++.||+ +++++++++|+| .++|++++|
T Consensus 22 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~ 98 (133)
T 3fk8_A 22 LAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVV 98 (133)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEE
T ss_pred HHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcccchHHHHHHhCCccCCccceEEEE
Confidence 3333466899999999999999999999999 999887543 99999999 899999999999 999999999
Q ss_pred -eCCEEEe-ecC-------CCCHHHHHHHHHhh
Q 017971 125 -MHGIPTE-YYG-------PRKAELLVRYLKKF 148 (363)
Q Consensus 125 -~~g~~~~-y~g-------~~~~~~i~~~i~~~ 148 (363)
++|+.+. +.| ..+.+.+.+|+.+.
T Consensus 99 d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 99 NSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp CTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 7887664 667 57888999888765
No 112
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.63 E-value=3.9e-17 Score=128.27 Aligned_cols=108 Identities=29% Similarity=0.537 Sum_probs=93.2
Q ss_pred cCCCCCeEEc-ChhhHHHhHc----CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhC
Q 017971 39 FKIDGKVIEL-DESNFDSAIS----SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQ 113 (363)
Q Consensus 39 ~~~~~~v~~l-~~~~f~~~l~----~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~ 113 (363)
+...+.+..+ +.++|++.+. ++++++|.||++||++|+++.|.+.++++.+. ++.++.+|++++++++++|
T Consensus 10 ~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~ 85 (130)
T 1wmj_A 10 AAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDELKEVAEKY 85 (130)
T ss_dssp CSSCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTSGGGHHHH
T ss_pred cccCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccchHHHHHHc
Confidence 3445678888 4589999885 37899999999999999999999999998764 3899999999999999999
Q ss_pred CcCcCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhcCC
Q 017971 114 EIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 114 ~i~~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~~~ 151 (363)
+|.++|++++|++|+.+. +.| .+.+.|.+++.+.+..
T Consensus 86 ~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 86 NVEAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp TCCSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred CCCccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 999999999999887664 677 5788999999888764
No 113
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.62 E-value=1.4e-15 Score=118.25 Aligned_cols=100 Identities=18% Similarity=0.253 Sum_probs=85.3
Q ss_pred CeEEcChhhHHHhHcC--CCeEEEEEECC-------CChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC-------ccch
Q 017971 44 KVIELDESNFDSAISS--FDYILVDFYAP-------WCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-------DKYS 107 (363)
Q Consensus 44 ~v~~l~~~~f~~~l~~--~~~~lv~fy~~-------~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~-------~~~~ 107 (363)
.+...+.++|++.+.+ +++++|.||++ ||++|+.+.|.+.++++.+.+ ++.|+.||+ +.++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHHHHHCTTC
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCchhhhchhH
Confidence 4667789999998865 78999999999 999999999999999877643 499999999 7889
Q ss_pred hhhhhCCcCcCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHh
Q 017971 108 RLASKQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKK 147 (363)
Q Consensus 108 ~l~~~~~i~~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~ 147 (363)
+++++|+|.++||+++|.++..+. +.| .+.+.|.+|+.+
T Consensus 83 ~~~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFRKNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 999999999999999998876554 444 567788888764
No 114
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.61 E-value=1.1e-15 Score=110.52 Aligned_cols=82 Identities=22% Similarity=0.301 Sum_probs=74.3
Q ss_pred eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHH
Q 017971 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELL 141 (363)
Q Consensus 62 ~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i 141 (363)
..+|.||++||++|+++.|.++++++.+.+ ++.+..+|++++++++++|++.++|++++ +|+. .+.|..+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD---KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS---SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCCHHHH
Confidence 468999999999999999999999988754 49999999999999999999999999998 7776 88998899999
Q ss_pred HHHHHhhc
Q 017971 142 VRYLKKFV 149 (363)
Q Consensus 142 ~~~i~~~~ 149 (363)
.+++.+.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998764
No 115
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.61 E-value=1.9e-15 Score=130.68 Aligned_cols=101 Identities=19% Similarity=0.209 Sum_probs=89.1
Q ss_pred CeEEcChhhHHHhHcCCCeE-EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 44 KVIELDESNFDSAISSFDYI-LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 44 ~v~~l~~~~f~~~l~~~~~~-lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
.+..+++++|+++++.++++ +|.||++||++|+.+.|.|+++++.+. ++.++.+||+++++++++|+|.++||++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 194 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND----YITSKVIDASENQDLAEQFQVVGVPKIV 194 (229)
T ss_dssp TCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEEGGGCHHHHHHTTCCSSSEEE
T ss_pred CccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC----CeEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 46778999999988666665 889999999999999999999998762 4999999999999999999999999999
Q ss_pred EEeCCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 123 IFMHGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 123 ~~~~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
+ +|+...|.|.++.+.|.+|+.+.+.
T Consensus 195 ~--~G~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 195 I--NKGVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp E--GGGTEEEESCCCHHHHHHHHHHHHH
T ss_pred E--CCEEEEeeCCCCHHHHHHHHHHHhh
Confidence 8 7775569999999999999987753
No 116
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.61 E-value=5.3e-15 Score=110.57 Aligned_cols=98 Identities=16% Similarity=0.132 Sum_probs=83.9
Q ss_pred CCeEEc-ChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCcCc
Q 017971 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDA 117 (363)
Q Consensus 43 ~~v~~l-~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~ 117 (363)
++...| +.++|+++++++++++|.|+|+||+.|+...|.++++++. . ++.++.||.+++++ ++++++|++
T Consensus 6 ~~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~~Sn~IA~~~~V~h 80 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERDLSDYIAKKTNVKH 80 (112)
T ss_dssp GCEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHHHHHHHHHHHTCCC
T ss_pred cceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCchhhHHHHHHhCCcc
Confidence 456677 5578999998899999999999999999999999999873 2 38999999999977 799999995
Q ss_pred -CCEEEEEeCCEEEe--ecCCCCHHHHHHHH
Q 017971 118 -FPTLKIFMHGIPTE--YYGPRKAELLVRYL 145 (363)
Q Consensus 118 -~Pt~~~~~~g~~~~--y~g~~~~~~i~~~i 145 (363)
.|++++|++|+.+- -.|..+.+.|.+.+
T Consensus 81 ~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 81 ESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp CSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999999998774 56778888777653
No 117
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.60 E-value=9.9e-15 Score=127.24 Aligned_cols=103 Identities=18% Similarity=0.206 Sum_probs=86.3
Q ss_pred cChhhHHHhHc-CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcC-CCCeEEEEEeCccchhhhhhCCcCcCCEEEEEe
Q 017971 48 LDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKL-KEPIVIAKVDADKYSRLASKQEIDAFPTLKIFM 125 (363)
Q Consensus 48 l~~~~f~~~l~-~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~-~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~ 125 (363)
+++++++.+.+ .++.+++.||+|||++|++..|.|++++..+... .+++.++.||++++++++++|+|.++||+++
T Consensus 125 l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-- 202 (243)
T 2hls_A 125 LEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-- 202 (243)
T ss_dssp CCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--
T ss_pred CCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--
Confidence 55666665543 3567899999999999999999999999887421 1359999999999999999999999999988
Q ss_pred CCEEEeecCCCCHHHHHHHHHhhcCCCc
Q 017971 126 HGIPTEYYGPRKAELLVRYLKKFVAPDV 153 (363)
Q Consensus 126 ~g~~~~y~g~~~~~~i~~~i~~~~~~~v 153 (363)
+|+.. |.|.++.++|.+|+.+.+++..
T Consensus 203 ~G~~~-~~G~~~~~~l~~~l~~~~~~~~ 229 (243)
T 2hls_A 203 NGYLV-FVGVPYEEDFLDYVKSAAEGRL 229 (243)
T ss_dssp TTEEE-EESCCCHHHHHHHHHHHHTTCC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHhhccc
Confidence 78754 9999999999999999887543
No 118
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.58 E-value=1.1e-15 Score=115.30 Aligned_cols=76 Identities=22% Similarity=0.287 Sum_probs=65.1
Q ss_pred CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc------cchhhhhhCCcCcCCEEEEEeCCEEEeec
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------KYSRLASKQEIDAFPTLKIFMHGIPTEYY 133 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~------~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~ 133 (363)
+++.+|.|||+||++|+++.|.|+++++.++ .|||+ +++++|++|+|.++||+++ +|+. |.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~--~~ 78 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT--YT 78 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE--EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE--ec
Confidence 3567999999999999999999999985542 57777 6889999999999999877 7764 89
Q ss_pred CCCCHHHHHHHHHhh
Q 017971 134 GPRKAELLVRYLKKF 148 (363)
Q Consensus 134 g~~~~~~i~~~i~~~ 148 (363)
|.++.+.|.+|+...
T Consensus 79 G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 79 GVRSLEALAVASGYP 93 (106)
T ss_dssp SCCCHHHHHHHHTCC
T ss_pred CCCCHHHHHHHhCCc
Confidence 999999999998544
No 119
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.53 E-value=1.5e-14 Score=119.25 Aligned_cols=102 Identities=16% Similarity=0.306 Sum_probs=82.2
Q ss_pred eEEcChhhHHHhH----cCCCeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeCccchhh--------
Q 017971 45 VIELDESNFDSAI----SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKYSRL-------- 109 (363)
Q Consensus 45 v~~l~~~~f~~~l----~~~~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~~~~~~l-------- 109 (363)
....+..+|++.+ .++++++|.|||+||++|+++.+.+ .++.+.+++ ++.++.||+++++++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~~~~~~~~~~~~ 104 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNKTPLTEPVKIME 104 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCCCEEEEEEEEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcccccchhhhhhh
Confidence 3445666777766 6789999999999999999986555 556655554 399999999988766
Q ss_pred ------------------hhhCCcCcCCEEEEE-eCCEEE-eecCCCC-HHHHHHHHHhhc
Q 017971 110 ------------------ASKQEIDAFPTLKIF-MHGIPT-EYYGPRK-AELLVRYLKKFV 149 (363)
Q Consensus 110 ------------------~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~-~~~i~~~i~~~~ 149 (363)
+++|+|.++||++++ ++|+.+ .+.|..+ .+.+.+++.+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 105 NGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp TTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999 678765 4789998 999999998764
No 120
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.29 E-value=7.3e-16 Score=121.04 Aligned_cols=98 Identities=17% Similarity=0.311 Sum_probs=82.3
Q ss_pred hhhHHHhHcCCCeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeC--ccchhhhhhCCcCcCCEEEEE
Q 017971 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDAFPTLKIF 124 (363)
Q Consensus 50 ~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~--~~~~~l~~~~~i~~~Pt~~~~ 124 (363)
++.++....++++++|.||++||++|+.+.|.+ .++++.+.+ ++.++.||+ +++++++++|+|.++||+++|
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA---RFVVASVSVDTPEGQELARRYRVPGTPTFVFL 85 (130)
Confidence 345555566778999999999999999999999 888876644 488999999 466899999999999999999
Q ss_pred --eCCEE--E-eecCCCCHHHHHHHHHhhcC
Q 017971 125 --MHGIP--T-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 125 --~~g~~--~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
++|+. + .+.|..+.+.+.+++.+.+.
T Consensus 86 d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 86 VPKAGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 56775 4 48899999999999988764
No 121
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.50 E-value=2.2e-14 Score=108.76 Aligned_cols=90 Identities=13% Similarity=0.270 Sum_probs=69.6
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc--hhhhhhCCcCcCCEEEEEeCCEEE-eecCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY--SRLASKQEIDAFPTLKIFMHGIPT-EYYGP 135 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~--~~l~~~~~i~~~Pt~~~~~~g~~~-~y~g~ 135 (363)
+.+.++|+|||+||++|+++.+++....+.... ...+.+..||.+++ ++++.+++|.++||+++|++|+.+ +..|.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCC
Confidence 447899999999999999998755433211100 01266778888876 579999999999999999999876 58999
Q ss_pred CCHHHHHHHHHhhc
Q 017971 136 RKAELLVRYLKKFV 149 (363)
Q Consensus 136 ~~~~~i~~~i~~~~ 149 (363)
...+.+..|+.+.+
T Consensus 96 ~~~~~f~~~L~~~l 109 (116)
T 3dml_A 96 PGEDFFWPMLARLI 109 (116)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999998764
No 122
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.50 E-value=1.5e-13 Score=111.16 Aligned_cols=93 Identities=18% Similarity=0.318 Sum_probs=76.9
Q ss_pred HHhHcCCCeEEEEEE-CCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeCccch-----------hhhhhCCcCcC
Q 017971 54 DSAISSFDYILVDFY-APWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKYS-----------RLASKQEIDAF 118 (363)
Q Consensus 54 ~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~~~~~-----------~l~~~~~i~~~ 118 (363)
.....++++++|.|| ++||++|+++.|.+ .++++.... ++.+..+|+++.+ +++++|+|.++
T Consensus 41 ~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~---~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~ 117 (154)
T 2ju5_A 41 EHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV---HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF 117 (154)
T ss_dssp HHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC---cEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC
Confidence 333356789999999 99999999999999 777665433 3899999998764 89999999999
Q ss_pred CEEEEE-eCCEEEe-ecCCC--CHHHHHHHHHhhcC
Q 017971 119 PTLKIF-MHGIPTE-YYGPR--KAELLVRYLKKFVA 150 (363)
Q Consensus 119 Pt~~~~-~~g~~~~-y~g~~--~~~~i~~~i~~~~~ 150 (363)
||++++ ++|+.+. + |.. +.+.+.+++.+.+.
T Consensus 118 Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 118 PELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp SEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 999999 6787654 6 888 89999999987754
No 123
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.50 E-value=1.2e-13 Score=108.82 Aligned_cols=87 Identities=15% Similarity=0.296 Sum_probs=77.0
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------chhhhhhCCcC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------YSRLASKQEID 116 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------~~~l~~~~~i~ 116 (363)
++++++|.||++||++|+...|.+.++++.+. ++.+..|+++. +..++++|++.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCC
Confidence 56899999999999999999999999998875 49999999987 68899999999
Q ss_pred cCCEEEEE-eCCEEEeec---CCCCHHHHHHHHHhhc
Q 017971 117 AFPTLKIF-MHGIPTEYY---GPRKAELLVRYLKKFV 149 (363)
Q Consensus 117 ~~Pt~~~~-~~g~~~~y~---g~~~~~~i~~~i~~~~ 149 (363)
++|+++++ ++|+...+. |..+.+.|.+++.+.+
T Consensus 99 ~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 99 WQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred CCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 99999999 567665788 9999999999998764
No 124
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.50 E-value=3.5e-13 Score=105.93 Aligned_cols=88 Identities=18% Similarity=0.285 Sum_probs=76.7
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-----------------------chhhhhhCCc
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----------------------YSRLASKQEI 115 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~i 115 (363)
++++++|.||++||++|+...|.+.++++.+. ++.+..|+++. +..+++.|++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 99 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC
Confidence 56899999999999999999999999998875 48999999843 5778999999
Q ss_pred CcCCEEEEEe-CCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 116 DAFPTLKIFM-HGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 116 ~~~Pt~~~~~-~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
.++|+++++. +|+...+.|..+.+.+.+++.+.+.
T Consensus 100 ~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 100 TQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred CCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 9999999995 6765578999999999999988754
No 125
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.49 E-value=2.5e-14 Score=116.99 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=78.4
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh-hhhhCCc--CcCCEEEEE-eC
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR-LASKQEI--DAFPTLKIF-MH 126 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~-l~~~~~i--~~~Pt~~~~-~~ 126 (363)
++++....++++++|.||++||++|+.+.|.|.++++..... +.|+.||++.+++ ++..|++ .++||+++| ++
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~ 113 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPS 113 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTT
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCchHHHHHhcccCCcCCeEEEECCC
Confidence 667777778899999999999999999999999987665432 5677788888877 8899988 669999999 68
Q ss_pred CEEEe-ecCC----------CCHHHHHHHHHhhc
Q 017971 127 GIPTE-YYGP----------RKAELLVRYLKKFV 149 (363)
Q Consensus 127 g~~~~-y~g~----------~~~~~i~~~i~~~~ 149 (363)
|+.+. +.|. .+.+.+++++.+.+
T Consensus 114 G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 114 GKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp SCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 87663 6663 77888888887764
No 126
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.49 E-value=1.2e-13 Score=97.70 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=64.7
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeCCEEEeecCCC-CHHHH
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPR-KAELL 141 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~-~~~~i 141 (363)
..|.||++||++|+.+.|.++++++.+.. ++.+..+| +++++++|+|.++||+++ +|+.+.. |.. +.++|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~~~~~~l 72 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI---DAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM-GRVASKEEI 72 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC---CEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC-SSCCCHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC---ceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc-CCCCCHHHH
Confidence 35899999999999999999999987653 49999999 788999999999999998 8876655 887 89999
Q ss_pred HHHH
Q 017971 142 VRYL 145 (363)
Q Consensus 142 ~~~i 145 (363)
.+|+
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8875
No 127
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.48 E-value=3.4e-13 Score=107.74 Aligned_cols=102 Identities=19% Similarity=0.250 Sum_probs=85.1
Q ss_pred EEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC----------------------
Q 017971 46 IELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA---------------------- 103 (363)
Q Consensus 46 ~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~---------------------- 103 (363)
..++.+.+.....++++++|.||++||++|++..|.+.++++.+.+. +.+..|++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 56666666655556789999999999999999999999999887653 88888885
Q ss_pred -----ccchhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 104 -----DKYSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 104 -----~~~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+.+..+++.|++.++|+++++ ++|+.+ .+.|..+.+.+.+++.+.+.
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 445689999999999999999 677765 47898999999999988765
No 128
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.47 E-value=8.4e-13 Score=106.12 Aligned_cols=111 Identities=16% Similarity=0.322 Sum_probs=88.7
Q ss_pred CccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-------
Q 017971 33 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK------- 105 (363)
Q Consensus 33 ~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~------- 105 (363)
.|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++.
T Consensus 6 ~p~~~l~~~~g~~~~l~~~-------~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~v~~d~~~~~~~~ 76 (151)
T 2f9s_A 6 APNFVLEDTNGKRIELSDL-------KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ--GVEIVAVNVGESKIAVHN 76 (151)
T ss_dssp CCCCEEECTTCCEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEEESCCHHHHHH
T ss_pred CCcceeEcCCCCEEEHHHc-------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHH
Confidence 4444444555666665542 5689999999999999999999999999988753 38888898865
Q ss_pred ---------------chhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcCCC
Q 017971 106 ---------------YSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 106 ---------------~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~~~ 152 (363)
+..+++.|++.++|+++++ ++|+.+ .+.|..+.+.|.+++.+.+...
T Consensus 77 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 77 FMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp HHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred HHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 4578999999999999999 577765 4789999999999999887643
No 129
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.47 E-value=2.8e-12 Score=118.00 Aligned_cols=198 Identities=13% Similarity=0.116 Sum_probs=145.0
Q ss_pred CCeEEcC-hhhHHHhHc-CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 43 GKVIELD-ESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 43 ~~v~~l~-~~~f~~~l~-~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
..+..++ .++++++++ +++.++|.|+++||. ...+.|.++|+.+.+ ++.|+.++ ++++|+++++. +|+
T Consensus 123 ~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~---~~~f~~~~---~~~~~~~~~v~-~p~ 192 (350)
T 1sji_A 123 DPVEIINSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQP---YIKFFATF---DKGVAKKLSLK-MNE 192 (350)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTT---TSEEEEEC---CHHHHHHHTCC-TTC
T ss_pred CcceeccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhcc---CcEEEEEC---CHHHHHHcCCC-CCc
Confidence 4577884 678999987 778999999999864 557899999998865 38899885 56799999999 999
Q ss_pred EEEEeC--CEEEeecCC-CCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCC-h-------hHHHHH
Q 017971 121 LKIFMH--GIPTEYYGP-RKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLD-E-------SVMSNL 189 (363)
Q Consensus 121 ~~~~~~--g~~~~y~g~-~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~-~-------~~~~~~ 189 (363)
+++|++ +.++.|.|. ++.+.|.+|+..+..|.+.+++.+. +.++.+......++ +.|... . +.++++
T Consensus 193 i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~-~~~~~~~~~~~~~~-l~f~~~~~~~~~~~~~~~~~v 270 (350)
T 1sji_A 193 VDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPED-MFETWEDDLNGIHI-VAFAERSDPDGYEFLEILKQV 270 (350)
T ss_dssp EEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTT-HHHHHHSCSSSEEE-EEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhh-HHHHhcCCCCCcEE-EEEEcCCCccHHHHHHHHHHH
Confidence 999986 356789997 9999999999999999999998754 66776543212233 334432 1 237778
Q ss_pred HHHhhh--hhHHHHh-hhcchhhh----hhcCCC-CCCeEEEEcCCCCCccc--cc---CCCCHHHHHHHHHhhcC
Q 017971 190 ALKYKK--KAWFAVA-KDFSEDTM----VLYDFD-KVPALVALQPSYNEHNI--FY---GPFDEEFLEEFIKQNFL 252 (363)
Q Consensus 190 a~~~~~--~~~~~~~-~~~~~~~~----~~~~~~-~~p~iv~~~~~~~~~~~--~~---g~~~~~~l~~fi~~~~~ 252 (363)
|..+++ ...|..+ ........ +.+|+. ..|.++++....+.... +. +.++.+.|.+|+++...
T Consensus 271 A~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 271 ARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp HHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHT
T ss_pred HHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhc
Confidence 888876 4444433 12223344 678887 47999999764343222 32 47899999999998643
No 130
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.47 E-value=5.1e-13 Score=106.30 Aligned_cols=107 Identities=20% Similarity=0.293 Sum_probs=85.7
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--- 105 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--- 105 (363)
.+...|+....+.++..+.+.+ ++++++|.||++||++|+...|.+.++++.+... ++.+..|+++.
T Consensus 11 ~g~~~p~~~l~~~~g~~~~l~~--------~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~ 80 (145)
T 3erw_A 11 QPAVPAVFLMKTIEGEDISIPN--------KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD--SVKLVTVNLVNSEQ 80 (145)
T ss_dssp -CCSCCEEEEECTTSCEEEESC--------TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS--SEEEEEEECGGGSS
T ss_pred CCCcCCCceeecCCCCEEeHHH--------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC--CEEEEEEEccCCcC
Confidence 3445555555555555555543 4589999999999999999999999999887633 49999999864
Q ss_pred ----------------------chhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHH
Q 017971 106 ----------------------YSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYL 145 (363)
Q Consensus 106 ----------------------~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i 145 (363)
+..+++.|++.++|+++++ ++|+.+ .+.|..+.+.+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 81 NQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 6689999999999999999 677765 489999999999886
No 131
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.45 E-value=5.4e-13 Score=108.78 Aligned_cols=112 Identities=18% Similarity=0.287 Sum_probs=89.4
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhh
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRL 109 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l 109 (363)
+...|+....+.++..+.+.+ .++++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++.+++.
T Consensus 11 g~~~p~~~l~~~~g~~~~l~~-------~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~v~~v~v~~d~~~~~ 81 (165)
T 3or5_A 11 PTPAPSFSGVTVDGKPFSSAS-------LKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR--GFTFVGIAVNEQLPN 81 (165)
T ss_dssp CCBCCCCEEECTTSCEEEGGG-------GTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT--TEEEEEEECSCCHHH
T ss_pred CCCCCCceeeCCCCCEechhH-------cCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHH
Confidence 344455444444555544443 25689999999999999999999999999988754 499999999988777
Q ss_pred hhhC---------------------------CcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 110 ASKQ---------------------------EIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 110 ~~~~---------------------------~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
++++ ++.++|+++++ ++|+.+ .+.|..+.+.+.+++.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 82 VKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp HHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 7777 89999999999 577765 47899999999999988875
No 132
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.45 E-value=2.4e-13 Score=108.63 Aligned_cols=115 Identities=17% Similarity=0.235 Sum_probs=91.6
Q ss_pred HHHhhcCCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEec--cCchhHHhhcCC
Q 017971 246 FIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGI--KQFADFADTFEA 322 (363)
Q Consensus 246 fi~~~~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~--~~~~~~~~~~gi 322 (363)
-++++++|++.++|.+++..++.++.+.+++++...++...+.+.+.++++|+++++ +.|+++|. .++...++.||+
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl 86 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGL 86 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTC
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCC
Confidence 356789999999999999999999999988877654455578899999999999998 99999999 677789999999
Q ss_pred CCCCCCCeEEEEeC--CCCeeEE-EEEEeehhhhhHhhhhhc
Q 017971 323 NKKSKLPKMVVWDG--NENYLTV-SINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 323 ~~~~~~P~~vi~~~--~~~y~~~-~~~~~~~~~~~~~~~~~~ 361 (363)
+..+.|+++|++. ++++|.+ .++++.+.|..||..||.
T Consensus 87 -~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 87 -KKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLE 127 (147)
T ss_dssp -CGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHT
T ss_pred -CcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHc
Confidence 5568999999986 4544554 488888999999999985
No 133
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.44 E-value=3.2e-12 Score=118.31 Aligned_cols=200 Identities=12% Similarity=0.111 Sum_probs=145.7
Q ss_pred CCeEEcC-hhhHHHhHc-CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 43 GKVIELD-ESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 43 ~~v~~l~-~~~f~~~l~-~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
..+..++ .++++++++ +++.++|.|+++||. ...+.|.++|+.+.+. +.|+.++ +.+++++|++.. |+
T Consensus 125 ~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~---~~F~~~~---~~~~~~~~~v~~-p~ 194 (367)
T 3us3_A 125 DPVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPY---IPFFATF---DSKVAKKLTLKL-NE 194 (367)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT---SCEEEEC---CHHHHHHHTCCT-TC
T ss_pred CCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCC---cEEEEEC---CHHHHHHcCCCC-Ce
Confidence 4577885 588999997 678999999999865 6678999999988654 8899886 467999999996 99
Q ss_pred EEEEeC--CEEEeecCC-CCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHH
Q 017971 121 LKIFMH--GIPTEYYGP-RKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNL 189 (363)
Q Consensus 121 ~~~~~~--g~~~~y~g~-~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~ 189 (363)
+++|++ +.++.|.|. ++.+.|.+|+..+..|.+.+++.+. +.+...+.... +.++.|.... +.++.+
T Consensus 195 i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~-~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~l~~v 272 (367)
T 3us3_A 195 IDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPES-MYETWEDDMDG-IHIVAFAEEADPDGYEFLEILKSV 272 (367)
T ss_dssp EEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGG-HHHHHHSCBTT-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhh-HHHHHhhccCC-cEEEEEEcCCChhHHHHHHHHHHH
Confidence 999987 467789995 9999999999999999999998754 55665543221 2444454321 237778
Q ss_pred HHHhhh--hhHHHHhh-hcchhh----hhhcCCC-CCCeEEEEcCCCCC--cccccC---CCCHHHHHHHHHhhcCCC
Q 017971 190 ALKYKK--KAWFAVAK-DFSEDT----MVLYDFD-KVPALVALQPSYNE--HNIFYG---PFDEEFLEEFIKQNFLPL 254 (363)
Q Consensus 190 a~~~~~--~~~~~~~~-~~~~~~----~~~~~~~-~~p~iv~~~~~~~~--~~~~~g---~~~~~~l~~fi~~~~~p~ 254 (363)
|+.+++ ...|..+. ...... ...+|+. +.|.++++....+. ...+.+ .++.+.|.+|+++.....
T Consensus 273 A~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gk 350 (367)
T 3us3_A 273 AQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGE 350 (367)
T ss_dssp HHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTS
T ss_pred HHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCC
Confidence 888887 45554331 111211 3458887 78999999865442 233443 689999999999874433
No 134
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.43 E-value=7.2e-12 Score=109.77 Aligned_cols=192 Identities=16% Similarity=0.218 Sum_probs=143.3
Q ss_pred CCeEEc-ChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l-~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
..+..| +.+.++++++.++.++|.|+++| |....+.|.++|+.+++. +.|+.+. +.++++++++.+ |++
T Consensus 6 P~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~---~~F~~~~---~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDN---YRFAHTN---VESLVNEYDDNG-EGI 75 (252)
T ss_dssp CCEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTT---SCEEEEC---CHHHHHHHCSSS-EEE
T ss_pred CCceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccC---cEEEEEC---hHHHHHHhCCCC-CcE
Confidence 347888 46778888988899999999998 457789999999988654 8888884 577999999997 999
Q ss_pred EEEeC--------CEEEee-cCCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeec--CC---h----
Q 017971 122 KIFMH--------GIPTEY-YGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG--LD---E---- 183 (363)
Q Consensus 122 ~~~~~--------g~~~~y-~g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~--~~---~---- 183 (363)
++|++ .....| .|..+.+.|.+|+..+.-|.+.+++.+. ...+ ... ++++.|. .. .
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n-~~~~-~~~----~~~v~~~~~~~~~~~~~~~ 149 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDN-KDLI-QGK----DLLIAYYDVDYEKNAKGSN 149 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTT-HHHH-SSS----SEEEEEECCBTTTBHHHHH
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccccc-Hhhh-cCC----CeEEEEeecchhhcchhHH
Confidence 99985 346679 9999999999999999999999998865 6665 222 2344433 11 1
Q ss_pred ---hHHHHHHHHhhhh---hHHHHh-hhcchhhhhhcCC----CCCCeEEEEcCCCCCcccccCCCCHHH--HHHHHHhh
Q 017971 184 ---SVMSNLALKYKKK---AWFAVA-KDFSEDTMVLYDF----DKVPALVALQPSYNEHNIFYGPFDEEF--LEEFIKQN 250 (363)
Q Consensus 184 ---~~~~~~a~~~~~~---~~~~~~-~~~~~~~~~~~~~----~~~p~iv~~~~~~~~~~~~~g~~~~~~--l~~fi~~~ 250 (363)
..++++|+.+++. ..|..+ ......+...+|+ ...|.++++.. .+....+.+.++.+. |.+|+++.
T Consensus 150 ~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 150 YWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDY 228 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECT-TSCEEECCSCCCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeC-cCcEecCCcccCcchHHHHHHHHHH
Confidence 2356688888876 555443 2223446788999 35799998864 344444667888888 99999986
Q ss_pred c
Q 017971 251 F 251 (363)
Q Consensus 251 ~ 251 (363)
.
T Consensus 229 ~ 229 (252)
T 2h8l_A 229 F 229 (252)
T ss_dssp H
T ss_pred H
Confidence 4
No 135
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.42 E-value=6e-13 Score=108.48 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=85.1
Q ss_pred CeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEE-----------------------
Q 017971 44 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAK----------------------- 100 (363)
Q Consensus 44 ~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~----------------------- 100 (363)
.+.+++.+.+.....++++++|.||++||++|+...|.+.++++.++..+ +.+..
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS--ANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT--SEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC--cEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 67777777776655567899999999999999999999999998765432 33333
Q ss_pred -----EeCccchhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 101 -----VDADKYSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 101 -----vd~~~~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
++++.+.+++++|+|.++|+++++ ++|+.+ .+.|..+.+.+.+++.+...
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 445567789999999999999999 577765 47899999999999988765
No 136
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.42 E-value=1.5e-12 Score=104.58 Aligned_cols=113 Identities=21% Similarity=0.350 Sum_probs=88.8
Q ss_pred CCCCc-cccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccch-
Q 017971 30 GLSSE-EETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS- 107 (363)
Q Consensus 30 ~~~~~-~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~- 107 (363)
|...| +....+.++..+.+.+. .+++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++.+.
T Consensus 6 G~~~p~~f~l~~~~g~~~~l~~~-------~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~ 76 (152)
T 2lja_A 6 GNPSAASFSYPDINGKTVSLADL-------KGKYIYIDVWATWCGPCRGELPALKELEEKYAGK--DIHFVSLSCDKNKK 76 (152)
T ss_dssp TCCCSSSCEEEETTTEEEESTTT-------TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS--SEEEEEEECCSCHH
T ss_pred CCCCCcccEeecCCCCEeeHHHc-------CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC--CeEEEEEEccCcHH
Confidence 33445 44444455555555432 5689999999999999999999999999887643 4999999998765
Q ss_pred ----------------------hhhhhCCcCcCCEEEEEe-CCEEEe-ecCCCCHHHHHHHHHhhcCC
Q 017971 108 ----------------------RLASKQEIDAFPTLKIFM-HGIPTE-YYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 108 ----------------------~l~~~~~i~~~Pt~~~~~-~g~~~~-y~g~~~~~~i~~~i~~~~~~ 151 (363)
.+++.|++.++|+++++. +|+.+. +.|..+.+.|.+++.+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 77 AWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp HHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 789999999999999997 677654 67888889999999888653
No 137
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.40 E-value=5e-12 Score=101.58 Aligned_cols=112 Identities=18% Similarity=0.316 Sum_probs=87.6
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccch--
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS-- 107 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~-- 107 (363)
|...|+....+ ++..+.+.+. ++++++|.||++||++|+...|.+.++++.+.+.+ +.+..|+++.++
T Consensus 6 G~~~P~f~l~~-~g~~~~l~~~-------~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~~~~ 75 (152)
T 3gl3_A 6 GDKAPDFALPG-KTGVVKLSDK-------TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG--FQVVAVNLDAKTGD 75 (152)
T ss_dssp TSBCCCCEEEB-SSSEEEGGGG-------TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSSHHH
T ss_pred CCcCCceEeeC-CCCeEeHHHh-------CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC--eEEEEEECCCCHHH
Confidence 44555555555 5666666543 56899999999999999999999999999987653 888889888655
Q ss_pred --------------------hhhhhCCcCcCCEEEEE-eCCEEE-eecCCC--CHHHHHHHHHhhcCC
Q 017971 108 --------------------RLASKQEIDAFPTLKIF-MHGIPT-EYYGPR--KAELLVRYLKKFVAP 151 (363)
Q Consensus 108 --------------------~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~--~~~~i~~~i~~~~~~ 151 (363)
.+++.|++.++|+++++ ++|+.+ .+.|.. +.+.|.+++.+....
T Consensus 76 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 76 AMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp HHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred HHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 68889999999999998 577665 467754 558999999888763
No 138
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.40 E-value=1.9e-12 Score=103.39 Aligned_cols=113 Identities=19% Similarity=0.261 Sum_probs=86.9
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHh-hcCCCCeEEEEEeCcc--
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPIL-AKLKEPIVIAKVDADK-- 105 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~-~~~~~~v~~~~vd~~~-- 105 (363)
.|...|+....+.++..+.+++.++ ++++++|.||++||++|+...|.+.++++.+ .+. ++.+..|+++.
T Consensus 7 ~g~~~p~~~l~~~~g~~~~l~~~~~-----~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~ 79 (148)
T 3fkf_A 7 VGKSAPYFSLPNEKGEKLSRSAERF-----RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK--NFAMLGISLDIDR 79 (148)
T ss_dssp TTSBCCCCCEEBTTSCEECTTSTTT-----TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT--TEEEEEEECCSCH
T ss_pred CCCcCCCeEeeCCCCCEEecccccc-----CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC--CeEEEEEECCCCH
Confidence 3455566666666777777763333 5689999999999999999999999999987 443 48888888876
Q ss_pred -----------------------chhhhhhCCcCcCCEEEEE-eCCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 106 -----------------------YSRLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 106 -----------------------~~~l~~~~~i~~~Pt~~~~-~~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
+..+++.|++.++|+++++ ++|+.+.. .. +.+.+.+++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~-~~-~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 80 EAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILAR-DI-QGEALTGKLKELLK 146 (148)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEE-SC-CHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEe-cC-CHHHHHHHHHHHHc
Confidence 4589999999999999999 56665432 22 88888888887653
No 139
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.40 E-value=2.9e-12 Score=103.08 Aligned_cols=112 Identities=15% Similarity=0.196 Sum_probs=86.9
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe-------
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD------- 102 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd------- 102 (363)
|...|+....+.++..+.+.+. ++++++|.||++||++|+...|.+.++++.+.+. ++.+..|+
T Consensus 5 G~~~p~~~l~~~~g~~~~l~~~-------~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~ 75 (153)
T 2l5o_A 5 SKTAPAFSLPDLHGKTVSNADL-------QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIE 75 (153)
T ss_dssp CTTCCSCEEECTTSCEEEHHHH-------TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHH
T ss_pred CCCCCCcEeecCCCCCccHHHh-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHH
Confidence 4445555555555555554321 5689999999999999999999999999988754 37676555
Q ss_pred ----------------CccchhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 103 ----------------ADKYSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 103 ----------------~~~~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
++.+..+++.|++.++|+++++ ++|+.+ .|.|..+.+.|.+++.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 76 SVRQYVKDYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4456789999999999999999 567654 48999999999999988764
No 140
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.39 E-value=3.6e-12 Score=101.22 Aligned_cols=110 Identities=17% Similarity=0.316 Sum_probs=83.9
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHH---HHHHhhcCCCCeEEEEEeCcc
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDE---AAPILAKLKEPIVIAKVDADK 105 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~---~a~~~~~~~~~v~~~~vd~~~ 105 (363)
.|..+|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.+ +.+.+++. ++.+..|+++.
T Consensus 3 ~G~~~p~f~l~~~~g~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~--~~~~v~v~~d~ 73 (142)
T 3ewl_A 3 AGMKAADFTYVTVHGDNSRMSRL-------KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG--TLRVLAIYPDE 73 (142)
T ss_dssp TTSBCCCCEEECTTCCEEEGGGC-------CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT--SEEEEEEECSS
T ss_pred CCCcCCCCEEECCCCCEEEhhhc-------CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC--CeEEEEEEecC
Confidence 34556666666667766666543 56899999999999999999999998 88887654 48999999886
Q ss_pred chhh------------------------hhhCCcCcCCEEEEEe-CCEEEeecCCCCHHHHHHHHHhhc
Q 017971 106 YSRL------------------------ASKQEIDAFPTLKIFM-HGIPTEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 106 ~~~l------------------------~~~~~i~~~Pt~~~~~-~g~~~~y~g~~~~~~i~~~i~~~~ 149 (363)
+++. ++.|+|.++|+++++. +|+.+ + +..+.++|.+++.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~-~-~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 74 NREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVI-L-KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEE-E-CSCCHHHHHHHHHC--
T ss_pred CHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEE-e-cCCCHHHHHHHHHHHc
Confidence 6543 4489999999999995 56543 3 5678899999887654
No 141
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.39 E-value=4.7e-13 Score=107.23 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=67.5
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEe-CCEE
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFM-HGIP 129 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~-~g~~ 129 (363)
+.++.+..++++++|.|||+||++|+.+.|.+.+..+..+..+.++....+| .+..+++.++++.++||+++|. +|+.
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCB
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCE
Confidence 3455556778999999999999999999999987532211101124444444 3455678899999999999998 7876
Q ss_pred Ee-ecCC----------CCHHHHHHHHHhhc
Q 017971 130 TE-YYGP----------RKAELLVRYLKKFV 149 (363)
Q Consensus 130 ~~-y~g~----------~~~~~i~~~i~~~~ 149 (363)
+. ..|. .+.+.+++.+++.+
T Consensus 114 v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 114 RADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp CTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 53 5565 33456666665543
No 142
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.38 E-value=3.2e-12 Score=102.97 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=86.7
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC--------
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-------- 103 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~-------- 103 (363)
..|+....+.++..+.+.+- + ++++|.||++||++|+...|.+.++++.+ ++.+..|++
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~-------~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~-----~v~~v~v~~d~~~~~~~ 76 (154)
T 3ia1_A 10 PLPDFLLLDPKGQPVTPATV-------S-KPAVIVFWASWCTVCKAEFPGLHRVAEET-----GVPFYVISREPRDTREV 76 (154)
T ss_dssp ECCCCCEECTTSCEECTTTS-------C-SSEEEEEECTTCHHHHHHHHHHHHHHHHH-----CCCEEEEECCTTCCHHH
T ss_pred cCCceEEECCCCCEechHHc-------C-CeEEEEEEcccChhHHHHHHHHHHHHHHc-----CCeEEEEeCCCcccHHH
Confidence 34444444455555554432 4 89999999999999999999999999987 278888888
Q ss_pred -------------------ccchhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcCCC
Q 017971 104 -------------------DKYSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVAPD 152 (363)
Q Consensus 104 -------------------~~~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~~~ 152 (363)
+.+..+++.|++.++|+++++ ++|+.+ .+.|..+.+.|.+++.++....
T Consensus 77 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 77 VLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp HHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 467889999999999998888 578765 4889999999999999987654
No 143
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.38 E-value=3.7e-12 Score=102.37 Aligned_cols=91 Identities=14% Similarity=0.233 Sum_probs=76.9
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc------------------------chhhhhhCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK------------------------YSRLASKQE 114 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~------------------------~~~l~~~~~ 114 (363)
++++++|.||++||++|+...|.+.++++.+++ .++.+..|+++. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK--GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhC
Confidence 568999999999999999999999999988743 359999999862 355778899
Q ss_pred --cCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcCC
Q 017971 115 --IDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVAP 151 (363)
Q Consensus 115 --i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~~ 151 (363)
+.++|+++++ ++|+.+ .+.|..+.+.+.+++.+....
T Consensus 101 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 101 NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 9999999999 467654 589999999999999887653
No 144
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.38 E-value=1.5e-12 Score=103.92 Aligned_cols=110 Identities=16% Similarity=0.221 Sum_probs=84.2
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh-
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR- 108 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~- 108 (363)
|...|+....+.++..+.+.+. ++++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++.+++
T Consensus 8 G~~~p~~~l~~~~g~~~~l~~~-------~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~ 78 (148)
T 3hcz_A 8 GKKAPNLYMTDTTGTYRYLYDV-------QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKDEE 78 (148)
T ss_dssp TSBCCCCCCBCTTSCBCCGGGC-------CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSSHH
T ss_pred CCcCCceEEecCCCCEEEhHHc-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCHHH
Confidence 3444554444444444443322 5689999999999999999999999999998764 49999999998777
Q ss_pred ------------------------hhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhh
Q 017971 109 ------------------------LASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 109 ------------------------l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
+++.|++.++|+++++ ++|+.+ .+.|..+.+.+++.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 79 WLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp HHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999 567655 467777777777666544
No 145
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.38 E-value=5.1e-12 Score=99.24 Aligned_cols=105 Identities=22% Similarity=0.388 Sum_probs=82.0
Q ss_pred ccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC----------
Q 017971 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA---------- 103 (363)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~---------- 103 (363)
|+....+.++..+.+.+. ++++++|.||++||++|+...|.+.++++.+. .++.+..+++
T Consensus 3 p~f~l~~~~g~~~~l~~~-------~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~v~i~~~~~~~~~~~~ 72 (138)
T 4evm_A 3 ADFELMGVDGKTYRLSDY-------KGKKVYLKFWASWCSICLASLPDTDEIAKEAG---DDYVVLTVVSPGHKGEQSEA 72 (138)
T ss_dssp CCCEEEBTTSCEEEGGGG-------TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT---TTEEEEEEECTTSTTCCCHH
T ss_pred CcceeECCCCCEEEHHHh-------CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC---CCcEEEEEEcCCCCchhhHH
Confidence 333444455666665542 56899999999999999999999999998743 3488888854
Q ss_pred ------------------ccchhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhh
Q 017971 104 ------------------DKYSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 104 ------------------~~~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
+.+..+++.|++.++|+++++ ++|+.+ .+.|..+.+.+.+++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 73 DFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HHHHHHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HHHHHHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 335679999999999999999 577765 588999999999988763
No 146
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.38 E-value=4.7e-12 Score=101.91 Aligned_cols=108 Identities=21% Similarity=0.343 Sum_probs=81.9
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc------
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK------ 105 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~------ 105 (363)
..|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++.
T Consensus 8 ~~p~f~l~~~~G~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~ 78 (152)
T 2lrn_A 8 VAPAITGIDLKGNSVSLNDF-------KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK--GFTIYGVSTDRREEDWK 78 (152)
T ss_dssp ECCCCEEECSSSCEEESGGG-------TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT--TEEEEEEECCSCHHHHH
T ss_pred cCCCceeEcCCCCEEeHHHc-------CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHH
Confidence 34454455556666666542 5689999999999999999999999999988653 48999999987
Q ss_pred -------------------chhhhhhCCcCcCCEEEEE-eCCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 106 -------------------YSRLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 106 -------------------~~~l~~~~~i~~~Pt~~~~-~~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
+..+++.|+|.++|+++++ ++|+.+... .+.+.+.+++.+...
T Consensus 79 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 79 KAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE--LRGDDLYNTVEKFVN 141 (152)
T ss_dssp HHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC--CCTTHHHHHHHHHHT
T ss_pred HHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEee--CCHHHHHHHHHHHHh
Confidence 5789999999999999999 567765421 234567666666543
No 147
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.37 E-value=1.9e-12 Score=105.66 Aligned_cols=88 Identities=16% Similarity=0.131 Sum_probs=71.1
Q ss_pred EEcChhhHHHhHc-CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCC---cCcCCEE
Q 017971 46 IELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQE---IDAFPTL 121 (363)
Q Consensus 46 ~~l~~~~f~~~l~-~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~---i~~~Pt~ 121 (363)
+.++++.++.+-. ++++++|.|||+||++|+...|.+.++++.+. ++.+..||.+++++++++|. +.++||+
T Consensus 39 ~~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~ 114 (167)
T 1z6n_A 39 NGLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRAEDDLRQRLALERIAIPLV 114 (167)
T ss_dssp HCCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHHHHHTTTTTTCSSCCSSEE
T ss_pred cCCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCCHHHHHHHHHcCCCCcCeE
Confidence 4456666655432 45789999999999999999999999997643 49999999999999999997 9999999
Q ss_pred EEEeCC-EEEeecCCCC
Q 017971 122 KIFMHG-IPTEYYGPRK 137 (363)
Q Consensus 122 ~~~~~g-~~~~y~g~~~ 137 (363)
++|.+| +.+...|.+.
T Consensus 115 i~~~~~G~~~~~~g~~p 131 (167)
T 1z6n_A 115 LVLDEEFNLLGRFVERP 131 (167)
T ss_dssp EEECTTCCEEEEEESSC
T ss_pred EEECCCCCEEEEEcCCC
Confidence 999875 6555446554
No 148
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.36 E-value=1.1e-12 Score=115.90 Aligned_cols=85 Identities=20% Similarity=0.314 Sum_probs=68.0
Q ss_pred hhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc------cchhhhhhCCcCcCCEEEE
Q 017971 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------KYSRLASKQEIDAFPTLKI 123 (363)
Q Consensus 50 ~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~------~~~~l~~~~~i~~~Pt~~~ 123 (363)
...+.+.+++.+ +|.||||||+||+++.|.|++++++++ .+||+ +++++|++++|+++||+++
T Consensus 189 ~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~---------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i 257 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII 257 (291)
T ss_dssp HHHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE
T ss_pred HHHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcC---------EEEEeecCchhhHHHHHHHcCCcccCeEEE
Confidence 455666665544 699999999999999999999986541 45665 3789999999999999655
Q ss_pred EeCCEEEeecCCCCHHHHHHHHHhhc
Q 017971 124 FMHGIPTEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 124 ~~~g~~~~y~g~~~~~~i~~~i~~~~ 149 (363)
+|+. |.|.++.+++.+|+....
T Consensus 258 --~G~~--~~G~~~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 258 --NGRT--YTGVRSLEALAVASGYPL 279 (291)
T ss_dssp --TTEE--EESCCCHHHHHHHTCCCC
T ss_pred --CCEE--ecCCCCHHHHHHHHCCCC
Confidence 8864 999999999999986443
No 149
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.36 E-value=1.4e-12 Score=106.62 Aligned_cols=82 Identities=18% Similarity=0.276 Sum_probs=70.3
Q ss_pred EEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHH-H--HHHHHHhhcCCCCeEEEEEeCccchhhhhhC--------C
Q 017971 46 IELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQ-L--DEAAPILAKLKEPIVIAKVDADKYSRLASKQ--------E 114 (363)
Q Consensus 46 ~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~-~--~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~--------~ 114 (363)
...+++.|+.+..+++++||.||++||++|+.+.|+ | .++++.+++. +.+++||.++++++.+.| +
T Consensus 25 ~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~---fv~ikVD~de~~~l~~~y~~~~q~~~g 101 (173)
T 3ira_A 25 YPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA---FVSIKVDREERPDIDNIYMTVCQIILG 101 (173)
T ss_dssp BCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH---CEEEEEETTTCHHHHHHHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc---CceeeeCCcccCcHHHHHHHHHHHHcC
Confidence 345678899999899999999999999999999994 3 4667766553 899999999999999998 9
Q ss_pred cCcCCEEEEEe-CCEEE
Q 017971 115 IDAFPTLKIFM-HGIPT 130 (363)
Q Consensus 115 i~~~Pt~~~~~-~g~~~ 130 (363)
+.++|+++++. +|+++
T Consensus 102 v~g~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 102 RGGWPLNIIMTPGKKPF 118 (173)
T ss_dssp CCCSSEEEEECTTSCEE
T ss_pred CCCCcceeeECCCCCce
Confidence 99999999997 67765
No 150
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.35 E-value=6.7e-12 Score=99.73 Aligned_cols=107 Identities=17% Similarity=0.164 Sum_probs=79.3
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHH---HHHHhhcCCCCeEEEEEeCccc
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDE---AAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~---~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
|..+|+....+.++....+.+- .+++++|.||++||++|+...|.+.+ +.+.+++. ++.+..|+.+.+
T Consensus 8 G~~ap~f~l~~~~g~~~~l~~~-------~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~--~~~vi~i~~d~~ 78 (142)
T 3eur_A 8 GTKALNFTYTLDSGVKGTLYQF-------PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK--KLKVLSIYPDEE 78 (142)
T ss_dssp TSBCCCCEEEETTSCEEETTTC-------CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT--SEEEEEEECSSC
T ss_pred CCccCCcEEEcCCCCEeeHHHc-------CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC--CeEEEEEEcCCC
Confidence 4455655555556666666442 45899999999999999999999999 89888653 488888998766
Q ss_pred hh------------------------hhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHH
Q 017971 107 SR------------------------LASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLK 146 (363)
Q Consensus 107 ~~------------------------l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~ 146 (363)
.+ +++.|++.++|+++++..+..+.+.+ .+.++|.+|+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 79 LDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp HHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEE-ECHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecC-CCHHHHHHHHh
Confidence 33 47889999999999996433333332 24678887775
No 151
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.34 E-value=2.2e-12 Score=96.41 Aligned_cols=77 Identities=14% Similarity=0.105 Sum_probs=68.9
Q ss_pred eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHH
Q 017971 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELL 141 (363)
Q Consensus 62 ~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i 141 (363)
..++.||++||+.|+++.|.+++++++. + +.+..+|.++++++.++|++. +|++++|.+|+.+ ..|..+.+.|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~~~~L 102 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---W--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLDSDVI 102 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---C--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCCCHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---C--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCCHHHH
Confidence 6699999999999999999999998764 2 889999999999999999997 9999999999876 4588888888
Q ss_pred HHHH
Q 017971 142 VRYL 145 (363)
Q Consensus 142 ~~~i 145 (363)
.+|+
T Consensus 103 ~~~L 106 (107)
T 2fgx_A 103 GAYL 106 (107)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8886
No 152
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.33 E-value=1.7e-11 Score=99.27 Aligned_cols=91 Identities=25% Similarity=0.457 Sum_probs=74.3
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------chhhhhhCCcCcCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------YSRLASKQEIDAFP 119 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-------------------~~~l~~~~~i~~~P 119 (363)
++++++|.||++||++|+...|.+.++++.+.+. ++.+..|+++. +.++++.|++.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG--DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT--SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC--CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcc
Confidence 5689999999999999999999999999988643 49999999987 68899999999999
Q ss_pred EEEEE-eCCEEE-eecCC--CCHHHHHHHHHhhcCC
Q 017971 120 TLKIF-MHGIPT-EYYGP--RKAELLVRYLKKFVAP 151 (363)
Q Consensus 120 t~~~~-~~g~~~-~y~g~--~~~~~i~~~i~~~~~~ 151 (363)
+++++ ++|+.. .+.|. .+.+++++.+.+..++
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 98888 567655 47775 4567777777766554
No 153
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.33 E-value=1.4e-11 Score=99.79 Aligned_cols=90 Identities=13% Similarity=0.238 Sum_probs=75.8
Q ss_pred CCCeEEEEEECCCChhhhh-HHHHHHHHHHHhhcCCCCeEEEEEeC----------------------------ccchh-
Q 017971 59 SFDYILVDFYAPWCGHCKR-LAPQLDEAAPILAKLKEPIVIAKVDA----------------------------DKYSR- 108 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~-~~~~~~~~a~~~~~~~~~v~~~~vd~----------------------------~~~~~- 108 (363)
++++++|.||++||++|+. ..|.+.++.+.+.+. ++.+..|++ +....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 106 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREG 106 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTT
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCcccc
Confidence 5689999999999999999 599999999988654 488888886 23334
Q ss_pred -----hhhhCCcCcCCEEEEEe-CCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 109 -----LASKQEIDAFPTLKIFM-HGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 109 -----l~~~~~i~~~Pt~~~~~-~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
+++.|++.++|+++++. +|+.+ .+.|..+.+.+.+++.+.+.
T Consensus 107 ~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 107 QRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp CSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred chhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 89999999999999995 67655 47899999999999988765
No 154
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.33 E-value=3.5e-12 Score=104.40 Aligned_cols=107 Identities=15% Similarity=0.213 Sum_probs=79.7
Q ss_pred cccCCCCCeEEc--ChhhHHHh-HcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe-----------
Q 017971 37 TKFKIDGKVIEL--DESNFDSA-ISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD----------- 102 (363)
Q Consensus 37 ~~~~~~~~v~~l--~~~~f~~~-l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd----------- 102 (363)
+...++-.+.++ +.+.+... +.++++++|.||++||++|+...|.+.++++. ++.+..|+
T Consensus 25 G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~v~~~~~~~~~~~~ 98 (168)
T 2b1k_A 25 GKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ------GIRVVGMNYKDDRQKAISW 98 (168)
T ss_dssp TSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCCEEEEEESCCHHHHHHH
T ss_pred CCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC------CCEEEEEECCCChHHHHHH
Confidence 334445556666 44444332 24678999999999999999999999998864 26666666
Q ss_pred ------------CccchhhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 103 ------------ADKYSRLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 103 ------------~~~~~~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++.+..++++|+|.++|+.+++ ++|+.+ .+.|..+.+.+.+++.+.+
T Consensus 99 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 99 LKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp HHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred HHHcCCCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 4556789999999999965555 577765 4789999999998887664
No 155
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.32 E-value=2.5e-12 Score=92.84 Aligned_cols=75 Identities=21% Similarity=0.186 Sum_probs=64.5
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHH
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVR 143 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~ 143 (363)
++.||++||++|+++.|.+++++..+ +.+||.+++++++++|+++ +|++++ .+|+.+. |..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCCHHHHHH
Confidence 78899999999999999998875321 6889999999999999998 999998 8888764 8889999999
Q ss_pred HHHhhcC
Q 017971 144 YLKKFVA 150 (363)
Q Consensus 144 ~i~~~~~ 150 (363)
|+.+...
T Consensus 71 ~l~~~~~ 77 (87)
T 1ttz_A 71 WLDAAPH 77 (87)
T ss_dssp HHHTCC-
T ss_pred HHHHHHH
Confidence 9987653
No 156
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.31 E-value=5.1e-11 Score=104.17 Aligned_cols=192 Identities=14% Similarity=0.109 Sum_probs=139.1
Q ss_pred CCeEEcCh-hhHHHhHcC-CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCE
Q 017971 43 GKVIELDE-SNFDSAISS-FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPT 120 (363)
Q Consensus 43 ~~v~~l~~-~~f~~~l~~-~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 120 (363)
..|..|++ ++++++++. ++.++|-|++++| ....+.|.++|+.+++. +.|+.+. +.++++++++.+ |+
T Consensus 6 P~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~---~~F~~t~---~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLRED---YKFHHTF---STEIAKFLKVSL-GK 75 (250)
T ss_dssp CSSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTT---CCEEEEC---CHHHHHHHTCCS-SE
T ss_pred CCceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcC---cEEEEEC---cHHHHHHcCCCC-Ce
Confidence 34677754 889998887 8999999999985 58899999999988654 8898874 678899999988 99
Q ss_pred EEEEeC--------CEEEeec--CCCCHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeec-CC-----h-
Q 017971 121 LKIFMH--------GIPTEYY--GPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG-LD-----E- 183 (363)
Q Consensus 121 ~~~~~~--------g~~~~y~--g~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~-~~-----~- 183 (363)
+++|++ ...+.|. |.++.+.|.+|+....-|.+.+++.++ ...... .. ++++.|. .+ .
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n-~~~~~~-~~---~l~~~~~~~d~~~~~~~ 150 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSN-DAKRYS-KR---PLVVVYYSVDFSFDYRT 150 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTT-HHHHSC-SS---SEEEEEECCCCSTTTHH
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccc-hhhhhc-cC---ccEEEEEecccccccch
Confidence 999985 3456798 579999999999999999999998864 555443 22 3344333 11 1
Q ss_pred ------hHHHHHHHHhhhhhHHHHhh-hcchhhhhhcCCCC--C-CeEEEEcCCCCCccccc-CCCCHHHHHHHHHhhc
Q 017971 184 ------SVMSNLALKYKKKAWFAVAK-DFSEDTMVLYDFDK--V-PALVALQPSYNEHNIFY-GPFDEEFLEEFIKQNF 251 (363)
Q Consensus 184 ------~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~-p~iv~~~~~~~~~~~~~-g~~~~~~l~~fi~~~~ 251 (363)
..++++|+.++ ...|..+. .........+|+.. . |.++++.. .+....+. +.++.+.|.+|++...
T Consensus 151 ~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 151 ATQFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDE-SGKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECT-TSCEEECCCCSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcC-CCceecCCcccCCHHHHHHHHHHHH
Confidence 23666787787 55554431 22234567888874 2 46666653 33444444 6789999999998864
No 157
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.30 E-value=2e-11 Score=98.67 Aligned_cols=90 Identities=12% Similarity=0.209 Sum_probs=75.5
Q ss_pred CCCeEEEEEECCCChhhhhH-HHHHHHHHHHhhcCCCCeEEEEEeCc----------------------------cch--
Q 017971 59 SFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIVIAKVDAD----------------------------KYS-- 107 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~-~~~~~~~a~~~~~~~~~v~~~~vd~~----------------------------~~~-- 107 (363)
++++++|.||++||++|+.. .|.+.++.+.+.+. ++.+..|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED--KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDG 104 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC--CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccch
Confidence 56899999999999999996 99999999988643 4888888863 222
Q ss_pred ---hhhhhCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhcC
Q 017971 108 ---RLASKQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 108 ---~l~~~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~~ 150 (363)
.+++.|++.++|+++++ ++|+.+ .+.|..+.+.+.+.+.+.+.
T Consensus 105 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 105 AMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 58999999999999999 467765 47899999999999988865
No 158
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.30 E-value=3e-11 Score=100.35 Aligned_cols=91 Identities=11% Similarity=0.235 Sum_probs=75.1
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCC----CCeEEEEEeCcc-chhhhhhC--------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLK----EPIVIAKVDADK-YSRLASKQ-------------------- 113 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~----~~v~~~~vd~~~-~~~l~~~~-------------------- 113 (363)
++++++|.||++||++|+...|.+.++.+.+.+.+ +++.|..|+++. +++.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 56899999999999999999999999999987653 234999999988 66666655
Q ss_pred -----CcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 114 -----EIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 114 -----~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++.++|+++++ ++|+.+ .+.|..+.+.|.+++.+.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 68999977776 567765 4889999999999998765
No 159
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.30 E-value=3e-11 Score=97.18 Aligned_cols=113 Identities=19% Similarity=0.372 Sum_probs=85.8
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc--
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-- 106 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~-- 106 (363)
.|...|+....+.++..+.+.+. ++++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++.+
T Consensus 4 ~G~~~p~~~l~~~~g~~~~l~~~-------~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~ 74 (154)
T 3kcm_A 4 EENPAPDFTLNTLNGEVVKLSDL-------KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK--PFRMLCVSIDEGGK 74 (154)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS--SEEEEEEECCTTHH
T ss_pred CCCCCCCeEEEcCCCCEEehhhc-------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--CeEEEEEEcCCcch
Confidence 34455665555566666666543 5689999999999999999999999999988653 488888988875
Q ss_pred ---------------------hhhhhhCCcCcCCEEEEE-eCCEEEe-ecCCC--CHHHHHHHHHhhcC
Q 017971 107 ---------------------SRLASKQEIDAFPTLKIF-MHGIPTE-YYGPR--KAELLVRYLKKFVA 150 (363)
Q Consensus 107 ---------------------~~l~~~~~i~~~Pt~~~~-~~g~~~~-y~g~~--~~~~i~~~i~~~~~ 150 (363)
..+++.|++.++|+++++ ++|+.+. +.|.. +.+.+.+++.+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 75 VAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp HHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred HHHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 448899999999977777 5677653 77764 66788888877654
No 160
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.29 E-value=4.9e-11 Score=95.99 Aligned_cols=106 Identities=12% Similarity=0.050 Sum_probs=81.1
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh-
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR- 108 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~- 108 (363)
+...|+....+.++..+.+.+- .+++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++...+
T Consensus 12 g~~~p~f~l~~~~G~~~~l~~~-------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~ 82 (152)
T 2lrt_A 12 EASIIDIQLKDLKGNTRSLTDL-------KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHF 82 (152)
T ss_dssp TTCSCCCCEEBTTSCEECTTTG-------GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHH
T ss_pred CCCCCCeEEEcCCCCEEeHHHh-------CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHH
Confidence 3445555555555555555432 4589999999999999999999999999998764 48999999987654
Q ss_pred ----------------------hhhhCCcCcCCEEEEEe-CCEEEe-ecCCCCHHHHHHH
Q 017971 109 ----------------------LASKQEIDAFPTLKIFM-HGIPTE-YYGPRKAELLVRY 144 (363)
Q Consensus 109 ----------------------l~~~~~i~~~Pt~~~~~-~g~~~~-y~g~~~~~~i~~~ 144 (363)
+++.|++.++|+++++. +|+.+. +.|..+.+....-
T Consensus 83 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 83 WKTSADNLPWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp HHHHHTTCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred HHHHHhCCCceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 88899999999999995 677654 6787776655443
No 161
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.28 E-value=7.4e-12 Score=100.97 Aligned_cols=86 Identities=21% Similarity=0.315 Sum_probs=70.2
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC-----------------------ccchhhhhhCCc
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-----------------------DKYSRLASKQEI 115 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~-----------------------~~~~~l~~~~~i 115 (363)
.+++++|.||++||++|++..|.+.++++. .++.+..|++ +.+..+++.|++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 115 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV 115 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc
Confidence 468999999999999999999999998754 2377777775 345678999999
Q ss_pred CcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 116 DAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 116 ~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
.++|+++++ ++|+.+ .+.|..+.+.+.+++.+.+
T Consensus 116 ~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 116 YGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp CSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred CccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 999977666 677765 4889999999998887764
No 162
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.26 E-value=3.1e-11 Score=98.43 Aligned_cols=86 Identities=20% Similarity=0.246 Sum_probs=73.7
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc------------------cc--------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------------------KY-------------- 106 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~------------------~~-------------- 106 (363)
++++++|.||++||++|+...|.+.++.+.+. ++.+..|+++ .+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDP 111 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCC
Confidence 56899999999999999999999999998875 4999999987 34
Q ss_pred --------hhhhhhCCcCcCCEEEEEe-CCEEEeecCCC-CHHHHHHHHHhhc
Q 017971 107 --------SRLASKQEIDAFPTLKIFM-HGIPTEYYGPR-KAELLVRYLKKFV 149 (363)
Q Consensus 107 --------~~l~~~~~i~~~Pt~~~~~-~g~~~~y~g~~-~~~~i~~~i~~~~ 149 (363)
..+++.|+|.++|+++++. +|+.+. .|.. +.+.|.+.+.+.+
T Consensus 112 ~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 112 SWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp TSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC-
T ss_pred CeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHh
Confidence 3789999999999999995 566555 8888 8999999988764
No 163
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.23 E-value=1.2e-10 Score=93.33 Aligned_cols=112 Identities=18% Similarity=0.198 Sum_probs=85.6
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChh--hhhHHHHHHHHHHHh-hcCCCCeEEEEEeCcc
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGH--CKRLAPQLDEAAPIL-AKLKEPIVIAKVDADK 105 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~--C~~~~~~~~~~a~~~-~~~~~~v~~~~vd~~~ 105 (363)
.|...|+....+.++..+.++++.+ ++++++|.||++||++ |+...|.+.++.+.+ ++. ++.+..|+++.
T Consensus 7 ~G~~~p~f~l~~~~g~~~~l~~~~~-----~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~ 79 (150)
T 3fw2_A 7 IGKYAPFFSLPNAKGEKITRSSDAF-----KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK--YIGMLGISLDV 79 (150)
T ss_dssp TTSBCCCCCEEBTTCCEECTTSTTT-----TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS--SEEEEEEECCS
T ss_pred CCCcCCccEeECCCCCEEecchhhh-----CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC--CeEEEEEEcCC
Confidence 3555666666666777777763333 5689999999999999 999999999999988 443 48899998876
Q ss_pred ch-------------------------hhhhhCCcCcCCEEEEE-eCCEEEeecCCCCHHHHHHHHHhhc
Q 017971 106 YS-------------------------RLASKQEIDAFPTLKIF-MHGIPTEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 106 ~~-------------------------~l~~~~~i~~~Pt~~~~-~~g~~~~y~g~~~~~~i~~~i~~~~ 149 (363)
.+ .+++.|++.++|+++++ ++|+.+... .+.+.+.+.+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 80 DKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN--LRGEELKKKIENIV 147 (150)
T ss_dssp CHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES--CCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEcc--CCHHHHHHHHHHHH
Confidence 54 78999999999999999 566654322 27777877776653
No 164
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.23 E-value=2.4e-11 Score=95.50 Aligned_cols=109 Identities=18% Similarity=0.230 Sum_probs=93.3
Q ss_pred hcCCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCC
Q 017971 250 NFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 328 (363)
Q Consensus 250 ~~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~ 328 (363)
.+.|++.++|.+++..+..++.|+++.|+.. ....+.+...+.++|+++++ +.|+++|.++++++++.||+ ...+.
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~--~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi-~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAET--AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNL-KTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSC--SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTC-CSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecC--hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCC-CcccC
Confidence 4789999999999998888888888888754 34566889999999999988 99999999999999999999 44569
Q ss_pred CeEEEEeC-CCCeeEEE--EEEeehhhhhHhhhhhc
Q 017971 329 PKMVVWDG-NENYLTVS--INVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 329 P~~vi~~~-~~~y~~~~--~~~~~~~~~~~~~~~~~ 361 (363)
|++++++. +|+.|... +.+..+.+..|+..+|+
T Consensus 80 Ptl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp SEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHH
T ss_pred CEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHc
Confidence 99999996 56556665 89999999999999885
No 165
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.23 E-value=1.7e-10 Score=103.36 Aligned_cols=199 Identities=16% Similarity=0.231 Sum_probs=138.9
Q ss_pred CCCceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHHhhhhhHHHHh-hh--cchhhhhhcCCCCC
Q 017971 150 APDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALKYKKKAWFAVA-KD--FSEDTMVLYDFDKV 218 (363)
Q Consensus 150 ~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~a~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~ 218 (363)
.+.+.+++. .++++.+.+... +++|.|+..+ +.+.+++..+.+...+..+ .+ ....++..|++.++
T Consensus 16 ~~~vv~lt~-~~f~~~i~~~~~--~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 16 DPHISELTP-KSFDKAIHNTNY--TSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp CTTCEECCH-HHHHHHHTSSSS--CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCeEEeCH-HHHHHHHHhCCC--eEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 346777855 679999954332 6777777653 3356666666654333322 12 45788999999999
Q ss_pred CeEEEEcCCC----------------CCcccccCCCCHHHHHHHHHhhcCCCcccCC-hhhHHhhhcC-CCcEEEEEEeC
Q 017971 219 PALVALQPSY----------------NEHNIFYGPFDEEFLEEFIKQNFLPLSVPIN-QDTLNLLKDD-KRKIVLAIVED 280 (363)
Q Consensus 219 p~iv~~~~~~----------------~~~~~~~g~~~~~~l~~fi~~~~~p~~~~lt-~~~~~~l~~~-~~~~~i~~~~~ 280 (363)
|++++|+++. .....|.|..+.+.|.+|+.+...+.+.+++ .+.++.+... ..+.+++ +..
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~-fs~ 171 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVL-FSK 171 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEE-EES
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEE-EcC
Confidence 9999998743 1256899999999999999999888888885 4677776655 3555554 443
Q ss_pred CChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHH--hhcCCC---------------CCCCCCeEEEEeCC-CCee
Q 017971 281 ETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFA--DTFEAN---------------KKSKLPKMVVWDGN-ENYL 341 (363)
Q Consensus 281 ~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~--~~~gi~---------------~~~~~P~~vi~~~~-~~y~ 341 (363)
... ....++.+|..+++ +.|+.++..+-.... +.|+.. ...+.|+++++++. +++.
T Consensus 172 ~~~-----~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 172 QDK-----ISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp SSS-----CCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred CCc-----chHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 222 23577888999887 999999876433222 333310 12568999999985 7888
Q ss_pred EEE-EEEeehhhhhHhh
Q 017971 342 TVS-INVLKTRVCFFML 357 (363)
Q Consensus 342 ~~~-~~~~~~~~~~~~~ 357 (363)
..+ +....+.|..|+.
T Consensus 247 ~y~g~~~~~~~i~~fi~ 263 (298)
T 3ed3_A 247 EYEGNSINKNDISKFLR 263 (298)
T ss_dssp ECCCSSCCHHHHHHHHH
T ss_pred EeccccCCHHHHHHHHH
Confidence 888 4789999999988
No 166
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.20 E-value=8.8e-11 Score=93.38 Aligned_cols=72 Identities=19% Similarity=0.267 Sum_probs=61.3
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~------------------------~~l~~~~~ 114 (363)
++++++|.||++||++|+...|.+.++++.+.+. .++.+..|+++.. ..++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC
Confidence 5689999999999999999999999999988641 2588888988763 57899999
Q ss_pred cCcCCEEEEEe--CCEEEe
Q 017971 115 IDAFPTLKIFM--HGIPTE 131 (363)
Q Consensus 115 i~~~Pt~~~~~--~g~~~~ 131 (363)
|.++|+++++. +|+.+.
T Consensus 106 v~~~P~~~lid~~~G~i~~ 124 (144)
T 1i5g_A 106 VKSIPTLVGVEADSGNIIT 124 (144)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCcEEe
Confidence 99999999996 676554
No 167
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.20 E-value=2.7e-10 Score=94.71 Aligned_cols=111 Identities=20% Similarity=0.358 Sum_probs=82.6
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc-----
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----- 106 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~----- 106 (363)
..|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++..
T Consensus 39 ~~p~f~l~~~~G~~~~l~~~-------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~ 109 (186)
T 1jfu_A 39 KLPDLAFEDADGKPKKLSDF-------RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP--NFEVVAINIDTRDPEKP 109 (186)
T ss_dssp BCCCCEEECTTSCEEEGGGG-------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT--TEEEEEEECCCSCTTHH
T ss_pred cCCCcEeEcCCCCEeeHHHc-------CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC--CcEEEEEECCCCCHHHH
Confidence 34444444445555555432 5689999999999999999999999999988643 488888988765
Q ss_pred hhhhhhCCcC-----------------------cCCEEEEE-eCCEEE-eecCCCC--HHHHHHHHHhhcCC
Q 017971 107 SRLASKQEID-----------------------AFPTLKIF-MHGIPT-EYYGPRK--AELLVRYLKKFVAP 151 (363)
Q Consensus 107 ~~l~~~~~i~-----------------------~~Pt~~~~-~~g~~~-~y~g~~~--~~~i~~~i~~~~~~ 151 (363)
..+++++++. ++|+++++ ++|+.+ .+.|..+ .+++.+++.+.+..
T Consensus 110 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 110 KTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp HHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred HHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 4567777774 89999999 567765 4778654 78899998887654
No 168
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.20 E-value=1.4e-10 Score=95.78 Aligned_cols=85 Identities=20% Similarity=0.320 Sum_probs=69.8
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC-----------------------ccchhhhhhCCc
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA-----------------------DKYSRLASKQEI 115 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~-----------------------~~~~~l~~~~~i 115 (363)
.+++++|.||++||++|+...|.+.++.+. ++.+..|++ +.+..+++.|++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 130 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGV 130 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCC
Confidence 568999999999999999999999998864 266777764 445678899999
Q ss_pred CcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 116 DAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 116 ~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
.++|+.+++ ++|+.+ .+.|..+.+.+.+++.+.+
T Consensus 131 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 131 YGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp CSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred CCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 999988888 467655 4789999999988887664
No 169
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.18 E-value=7.7e-11 Score=93.64 Aligned_cols=73 Identities=21% Similarity=0.323 Sum_probs=61.3
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~------------------------~~l~~~~~ 114 (363)
++++++|.||++||++|+...|.+.++++.+.+. .++.+..|+++.+ ..++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 5689999999999999999999999999988631 2488888888763 46899999
Q ss_pred cCcCCEEEEEe--CCEEEee
Q 017971 115 IDAFPTLKIFM--HGIPTEY 132 (363)
Q Consensus 115 i~~~Pt~~~~~--~g~~~~y 132 (363)
|.++|+++++. +|+.+..
T Consensus 106 v~~~Pt~~lid~~~G~i~~~ 125 (144)
T 1o73_A 106 VESIPTLITINADTGAIIGT 125 (144)
T ss_dssp CCSSSEEEEEETTTCCEEES
T ss_pred CCCCCEEEEEECCCCeEEec
Confidence 99999999998 6766543
No 170
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.18 E-value=9.9e-11 Score=93.35 Aligned_cols=72 Identities=19% Similarity=0.283 Sum_probs=61.2
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~------------------------~~l~~~~~ 114 (363)
++++++|.||++||++|+...|.+.++++.+.+. .++.+..|+++.+ ..++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC
Confidence 5689999999999999999999999999988631 2488888888753 57899999
Q ss_pred cCcCCEEEEEe--CCEEEe
Q 017971 115 IDAFPTLKIFM--HGIPTE 131 (363)
Q Consensus 115 i~~~Pt~~~~~--~g~~~~ 131 (363)
|.++|+++++. +|+.+.
T Consensus 106 v~~~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 106 VESIPTLIGVDADSGDVVT 124 (146)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCeEEE
Confidence 99999999997 676554
No 171
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.18 E-value=1.2e-10 Score=106.42 Aligned_cols=89 Identities=13% Similarity=0.222 Sum_probs=76.2
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---------------------------chhhhh
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------------------------YSRLAS 111 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---------------------------~~~l~~ 111 (363)
++++++|.||++||++|+...|.+.++++++++. ++.+..|+++. +..+++
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~--~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS--GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWT 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC--CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHH
Confidence 4689999999999999999999999999998754 38899998752 357899
Q ss_pred hCCcCcCCEEEEE-eCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 112 KQEIDAFPTLKIF-MHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 112 ~~~i~~~Pt~~~~-~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
.|+|.++|+++++ ++|+.+ .+.|..+.+.+.+++.+.+
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9999999999999 567765 4789999999999988765
No 172
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.16 E-value=2e-10 Score=96.35 Aligned_cols=111 Identities=16% Similarity=0.182 Sum_probs=82.2
Q ss_pred CCCcccccc-CCCCCeEEcChhhHHHhHcCCC-eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc----
Q 017971 31 LSSEEETKF-KIDGKVIELDESNFDSAISSFD-YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD---- 104 (363)
Q Consensus 31 ~~~~~~~~~-~~~~~v~~l~~~~f~~~l~~~~-~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~---- 104 (363)
...|+.... +.++..+.+.+ + .++ +++|.||++||++|+...|.+.++.+++.+. ++.+..|+++
T Consensus 22 ~~~p~f~l~~~~~G~~~~l~~------~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~ 92 (196)
T 2ywi_A 22 KQAPPFALTNVIDGNVVRLED------V-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQ 92 (196)
T ss_dssp CBCCCCEEEETTTCCEEEHHH------H-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTT
T ss_pred CcCCceeeeecCCCCEEeHHH------h-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCcccc
Confidence 334444444 44454444432 1 344 6999999999999999999999999988754 3888889883
Q ss_pred -------------------------cchhhhhhCCcCcCCEEEEEe-CCEEEe----------ecCCCCHHHHHHHHHhh
Q 017971 105 -------------------------KYSRLASKQEIDAFPTLKIFM-HGIPTE----------YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 105 -------------------------~~~~l~~~~~i~~~Pt~~~~~-~g~~~~----------y~g~~~~~~i~~~i~~~ 148 (363)
.+..+++.|++.++|+++++. +|+.+. +.|..+.+.|.+.+.+.
T Consensus 93 ~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 93 YPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp CGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 456789999999999999995 666542 24667888898888877
Q ss_pred cC
Q 017971 149 VA 150 (363)
Q Consensus 149 ~~ 150 (363)
+.
T Consensus 173 l~ 174 (196)
T 2ywi_A 173 LE 174 (196)
T ss_dssp HH
T ss_pred Hc
Confidence 64
No 173
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.16 E-value=1.9e-10 Score=95.84 Aligned_cols=109 Identities=15% Similarity=0.117 Sum_probs=81.6
Q ss_pred CCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC-------
Q 017971 31 LSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA------- 103 (363)
Q Consensus 31 ~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~------- 103 (363)
...|+....+.++..+.+.+- .+++++|.||++||++|+...|.+.++.+.+.+. +.+..|++
T Consensus 11 ~~~p~f~l~~~~G~~~~l~~~-------~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~ 80 (188)
T 2cvb_A 11 SPLIDAELPDPRGGRYRLSQF-------HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYP 80 (188)
T ss_dssp CBCCCCEEECTTSCEEEGGGC-------CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCG
T ss_pred CCCCCceeecCCCCEEeHHHh-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCcccccc
Confidence 344555555555655555432 4589999999999999999999999999987643 88899988
Q ss_pred ----------------------ccchhhhhhCCcCcCCEEEEEe-CCEEEeecCC----------CCHHHHHHHHHhhcC
Q 017971 104 ----------------------DKYSRLASKQEIDAFPTLKIFM-HGIPTEYYGP----------RKAELLVRYLKKFVA 150 (363)
Q Consensus 104 ----------------------~~~~~l~~~~~i~~~Pt~~~~~-~g~~~~y~g~----------~~~~~i~~~i~~~~~ 150 (363)
+.+.++++.|++.++|+++++. +|+.+ +.|. .+.+.|.+.+.+.+.
T Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~-~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 81 EDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLR-YHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp GGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEE-EEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEEECCCCcEE-EEEecCCccccccccCHHHHHHHHHHHHc
Confidence 3456789999999999999994 56544 3343 356788888877764
No 174
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.13 E-value=2.2e-10 Score=90.92 Aligned_cols=84 Identities=19% Similarity=0.199 Sum_probs=65.5
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc--------------------------hhhhhh
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY--------------------------SRLASK 112 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~--------------------------~~l~~~ 112 (363)
++++++|.||++||++|+...|.+.++.+.+++. ++.+..|+++.+ ..+++.
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 108 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKK 108 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHH
Confidence 5689999999999999999999999999887643 488888887743 247788
Q ss_pred CCcCcCCEEEEEe-CCEEEeecCCCCHHHHHHHHH
Q 017971 113 QEIDAFPTLKIFM-HGIPTEYYGPRKAELLVRYLK 146 (363)
Q Consensus 113 ~~i~~~Pt~~~~~-~g~~~~y~g~~~~~~i~~~i~ 146 (363)
|++.++|+.+++. +|+.+. .+ ...+++.+.+.
T Consensus 109 ~~v~~~P~~~lid~~G~i~~-~~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 109 YDLRKGFKNFLINDEGVIIA-AN-VTPEKLTEILK 141 (143)
T ss_dssp TTGGGCCCEEEECTTSBEEE-ES-CCHHHHHHHHT
T ss_pred cCCCCCCcEEEECCCCEEEE-cc-CCHHHHHHHHH
Confidence 9999999999997 565443 32 24666666654
No 175
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.12 E-value=2e-10 Score=93.79 Aligned_cols=72 Identities=25% Similarity=0.336 Sum_probs=61.5
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc------------------------hhhhhhCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY------------------------SRLASKQE 114 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~------------------------~~l~~~~~ 114 (363)
++++++|.||++||++|++..|.+.++++.+++. .++.+..|+++.. ..+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC
Confidence 5689999999999999999999999999998752 2588888888766 67899999
Q ss_pred cCcCCEEEEEeC--CEEEe
Q 017971 115 IDAFPTLKIFMH--GIPTE 131 (363)
Q Consensus 115 i~~~Pt~~~~~~--g~~~~ 131 (363)
|.++|+++++.. |+.+.
T Consensus 126 v~~~Pt~~lid~~~G~iv~ 144 (165)
T 3s9f_A 126 VESIPTLIGLNADTGDTVT 144 (165)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEeCCCCEEEe
Confidence 999999999983 65544
No 176
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.70 E-value=7.4e-12 Score=99.41 Aligned_cols=78 Identities=27% Similarity=0.405 Sum_probs=62.7
Q ss_pred CCC-eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc-------------------------hhhhhh
Q 017971 59 SFD-YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-------------------------SRLASK 112 (363)
Q Consensus 59 ~~~-~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~-------------------------~~l~~~ 112 (363)
+++ +++|.||++||++|+...|.+.++++.+++.+.++.+..|+++.+ ..++++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 345 999999999999999999999999988854334577888877655 378999
Q ss_pred CCcCcCCEEEEEe-CCEEEeecCCC
Q 017971 113 QEIDAFPTLKIFM-HGIPTEYYGPR 136 (363)
Q Consensus 113 ~~i~~~Pt~~~~~-~g~~~~y~g~~ 136 (363)
|+|.++|+++++. +|+.+...|..
T Consensus 104 ~~v~~~P~~~lid~~G~i~~~~~~~ 128 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLISMNGRG 128 (143)
Confidence 9999999999997 67665554433
No 177
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.10 E-value=5.6e-10 Score=95.44 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=81.3
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCC-eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc----
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFD-YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD---- 104 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~-~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~---- 104 (363)
|...|+....+.++..+.+.+- .++ +++|.||++||++|+...|.+.++.+++++. .+.+..|+++
T Consensus 35 G~~aP~f~l~~~~G~~v~l~~~-------~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~ 105 (218)
T 3u5r_E 35 GTRAADFVLPDAGGNLFTLAEF-------KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ--GLAVVAINSNDAQA 105 (218)
T ss_dssp TCBCCCCCEECTTCCEECGGGG-------TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT--TEEEEEEECSCTTT
T ss_pred CCcCCCcEeECCCCCEEeHHHh-------CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCcccc
Confidence 4445555555555555544331 345 5999999999999999999999999998754 3889999983
Q ss_pred -------------------------cchhhhhhCCcCcCCEEEEEe-CCEEEeecC-----------CCCHHHHHHHHHh
Q 017971 105 -------------------------KYSRLASKQEIDAFPTLKIFM-HGIPTEYYG-----------PRKAELLVRYLKK 147 (363)
Q Consensus 105 -------------------------~~~~l~~~~~i~~~Pt~~~~~-~g~~~~y~g-----------~~~~~~i~~~i~~ 147 (363)
.+..+++.|++.++|+++++. +|+. .|.| ..+.+.|.+.+.+
T Consensus 106 ~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i-~~~g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 106 FPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRL-VYHGQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp CGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBE-EEEECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcE-EEeccccccccccccccCHHHHHHHHHH
Confidence 456899999999999999995 5654 4554 2345677777766
Q ss_pred hcC
Q 017971 148 FVA 150 (363)
Q Consensus 148 ~~~ 150 (363)
.+.
T Consensus 185 ll~ 187 (218)
T 3u5r_E 185 VLK 187 (218)
T ss_dssp HHT
T ss_pred HHc
Confidence 654
No 178
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.05 E-value=1.4e-10 Score=88.64 Aligned_cols=87 Identities=21% Similarity=0.296 Sum_probs=61.3
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc-----hhhhhhCCcCcCCEEEEEe
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-----SRLASKQEIDAFPTLKIFM 125 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~-----~~l~~~~~i~~~Pt~~~~~ 125 (363)
+.++++++. +.+++ ||++||++|++..|.+++++.. +.+..+|.+.+ ..+++++++.++|++ |.
T Consensus 11 ~~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~-------~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~ 79 (116)
T 2e7p_A 11 KKAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS-------YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FI 79 (116)
T ss_dssp HHHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC-------CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC-------eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 445556654 45555 9999999999999999887521 45666666554 569999999999999 56
Q ss_pred CCEEEe-ecCCC---CHHHHHHHHHhh
Q 017971 126 HGIPTE-YYGPR---KAELLVRYLKKF 148 (363)
Q Consensus 126 ~g~~~~-y~g~~---~~~~i~~~i~~~ 148 (363)
+|+.+. +.|.. +.+.|.+|+.+.
T Consensus 80 ~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 80 GGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp TTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred CCEEECChHHHHHHHhCChHHHHHHHc
Confidence 887664 44433 445566666553
No 179
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.05 E-value=2.2e-09 Score=99.74 Aligned_cols=192 Identities=11% Similarity=0.128 Sum_probs=114.2
Q ss_pred CeEEcCh-hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 44 KVIELDE-SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 44 ~v~~l~~-~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
.+..+++ +++++ +..++.++|.|++++|.. ..+.|.++|+.+++. +.|+...+ ++++++++.++| ++
T Consensus 119 ~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~---~~F~~~~~----~~~~~~~v~~~p-i~ 186 (382)
T 2r2j_A 119 PIQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDD---CAFLSAFG----DVSKPERYSGDN-II 186 (382)
T ss_dssp CCEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTT---CEEEEEES----CC--------CE-EE
T ss_pred CceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhcc---ceEEEEeh----hhHHhhCCCCCc-eE
Confidence 3556643 46777 667788999999998654 467899999988654 88888886 367889999999 65
Q ss_pred EEeCC---EEEeecCCC-CHHHHHHHHHhhcCCCceecCChHHHHHHHHhcCCcccEEEeecCCh--h---HH-HHH---
Q 017971 123 IFMHG---IPTEYYGPR-KAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--S---VM-SNL--- 189 (363)
Q Consensus 123 ~~~~g---~~~~y~g~~-~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~---~~-~~~--- 189 (363)
++..+ ....|.|.+ +.+.|.+|+..+..|.+.+++.+ .+.++..... ++++.|.... + .+ ..+
T Consensus 187 ~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~-~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~ 262 (382)
T 2r2j_A 187 YKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFE-NGEELTEEGL---PFLILFHMKEDTESLEIFQNEVARQ 262 (382)
T ss_dssp EECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHH-HHHHHHTTCC---CEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChh-hHHHHhcCCC---cEEEEEecCCchHHHHHHHHHHHHH
Confidence 55542 456799998 99999999999999999999775 4667665443 4555554321 1 12 222
Q ss_pred HHHhhhhhHHHHh-hhcchhhhhhcCCC--CCCeEEEEcCCCCC-cccccCCCCHHHHHHHHHhhc
Q 017971 190 ALKYKKKAWFAVA-KDFSEDTMVLYDFD--KVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQNF 251 (363)
Q Consensus 190 a~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~p~iv~~~~~~~~-~~~~~g~~~~~~l~~fi~~~~ 251 (363)
+..+++...|..+ ..........+|++ ..|.+++....... ...+.+.++.+.|.+|+++..
T Consensus 263 ~~~~~~~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~~~y~~~~~~~~~~~~~i~~F~~d~~ 328 (382)
T 2r2j_A 263 LISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLH 328 (382)
T ss_dssp TGGGTTTSEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSSCEEECCCSGGGGSTTHHHHHHHHHH
T ss_pred HHHhCCeeEEEEEchHHhHHHHHHcCCCccCCCEEEEEcchhcCCCCccccccCHHHHHHHHHHHH
Confidence 2234444444333 12234467788887 57998887542110 111234456789999998863
No 180
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.04 E-value=3.6e-10 Score=83.98 Aligned_cols=81 Identities=16% Similarity=0.189 Sum_probs=66.3
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhCCcCcCCEEEEEeCCEEEeecCCC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQEIDAFPTLKIFMHGIPTEYYGPR 136 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~ 136 (363)
...+.++.|+++||++|+++.|.++++++ .+.|..+|.+ +++++.++|+ .++|++ +.+|+.. ..|..
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~-------~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~ 82 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD-------RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRV 82 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS-------SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSC
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh-------CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCC
Confidence 34678999999999999999999887542 2889999998 7899999999 999986 4677765 45668
Q ss_pred CHHHHHHHHHhhcC
Q 017971 137 KAELLVRYLKKFVA 150 (363)
Q Consensus 137 ~~~~i~~~i~~~~~ 150 (363)
+.+.|.+++.+...
T Consensus 83 ~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 83 NTSKLEKQLRKLSG 96 (100)
T ss_dssp CHHHHHHHHHSSSC
T ss_pred CHHHHHHHHHHHHh
Confidence 88999999987654
No 181
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.03 E-value=1.9e-09 Score=87.43 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=74.4
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCe-EEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc---
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDY-ILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--- 104 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~-~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~--- 104 (363)
|..+|+....+.++..+.+.+- .+++ ++|.|| ++||++|+...|.+.++.+++++.+ +.+..|+++
T Consensus 5 G~~~P~f~l~~~~G~~~~l~~~-------~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~vs~d~~~ 75 (161)
T 3drn_A 5 GDKAPLFEGIADNGEKISLSDY-------IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD--VVVIGVSSDDIN 75 (161)
T ss_dssp TSBCCCCEEEETTSCEEEGGGT-------TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC--EEEEEEESCCHH
T ss_pred CCcCCCeEeecCCCCEEEHHHh-------cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEeCCCHH
Confidence 4455665555566666665432 3455 999999 9999999999999999999987643 888888876
Q ss_pred ------------------cchhhhhhCCcCc----CCEEEEEe-CCEEE-eecC
Q 017971 105 ------------------KYSRLASKQEIDA----FPTLKIFM-HGIPT-EYYG 134 (363)
Q Consensus 105 ------------------~~~~l~~~~~i~~----~Pt~~~~~-~g~~~-~y~g 134 (363)
.+..+++.|++.+ +|+.+++. +|+.. .+.|
T Consensus 76 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 76 SHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp HHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEec
Confidence 5678899999999 99999995 67655 3677
No 182
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.03 E-value=1.7e-09 Score=86.49 Aligned_cols=95 Identities=14% Similarity=0.231 Sum_probs=72.9
Q ss_pred hhHHHhH----cCCCeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeCcc--chhhhhhCCcCcCCEE
Q 017971 51 SNFDSAI----SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADK--YSRLASKQEIDAFPTL 121 (363)
Q Consensus 51 ~~f~~~l----~~~~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~ 121 (363)
.+|++++ .++++++|.||++||..|+.+.... .++++.+++. +.+.++|.+. ...+.++|++.++|++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~---fv~v~~d~~~~~~~~l~~~y~v~~~P~~ 105 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH---FIFWQVYHDSEEGQRYIQFYKLGDFPYV 105 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT---EEEEEEESSSHHHHHHHHHHTCCSSSEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcC---eEEEEEecCCHhHHHHHHHcCCCCCCEE
Confidence 3555554 5689999999999999999997665 4455555443 8889999865 3568899999999999
Q ss_pred EEEeC--CEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 122 KIFMH--GIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 122 ~~~~~--g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
+++.. |+.+. ..| .+++++++++++.+
T Consensus 106 ~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 106 SILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp EEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred EEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 99964 54443 555 89999988887664
No 183
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.02 E-value=1.6e-09 Score=104.85 Aligned_cols=96 Identities=14% Similarity=0.223 Sum_probs=81.4
Q ss_pred EEcChhhHHHhHc-CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEE
Q 017971 46 IELDESNFDSAIS-SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF 124 (363)
Q Consensus 46 ~~l~~~~f~~~l~-~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 124 (363)
..++++.++++.+ ..+..++.||++||++|+...|.+++++.... ++.+.++|.+++++++++|+|.++|++++
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~~~~~~~~~i~svPt~~i- 176 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTFQNEITERNVMGVPAVFV- 176 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTCHHHHHHTTCCSSSEEEE-
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhhHHHHHHhCCCccCEEEE-
Confidence 4567777777653 34577889999999999999999999987643 49999999999999999999999999977
Q ss_pred eCCEEEeecCCCCHHHHHHHHHhh
Q 017971 125 MHGIPTEYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 125 ~~g~~~~y~g~~~~~~i~~~i~~~ 148 (363)
+|+.+. .|..+.++|.+|+.+.
T Consensus 177 -~g~~~~-~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 177 -NGKEFG-QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp -TTEEEE-ESCCCHHHHHHHHCCS
T ss_pred -CCEEEe-cCCCCHHHHHHHHhhc
Confidence 887664 4999999999998664
No 184
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=3.5e-11 Score=97.42 Aligned_cols=88 Identities=13% Similarity=0.215 Sum_probs=64.5
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHH-HHHHhhcCCCCeEEEEEeCccchhhhhhCC-----------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDE-AAPILAKLKEPIVIAKVDADKYSRLASKQE----------------------- 114 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~-~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~----------------------- 114 (363)
++++++|.||++||++|+...|.+.+ +.+.+.. ..++.+..|+++++++.+++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~-~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 110 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD-NADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYAL 110 (159)
Confidence 56899999999999999999999998 8777651 2348888888887665555444
Q ss_pred -cCcCCEEEEE-eCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 115 -IDAFPTLKIF-MHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 115 -i~~~Pt~~~~-~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
+.++|+++++ ++|+.+. +.| .+.+++.+++.+.
T Consensus 111 ~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 111 RDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQI 146 (159)
Confidence 6779999999 5676554 445 4555565555443
No 185
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.98 E-value=4e-09 Score=85.52 Aligned_cols=106 Identities=8% Similarity=0.111 Sum_probs=79.9
Q ss_pred cccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChh-hhhHHHHHHHHHHHhhcC--CCCeEEEEEeCccc-------
Q 017971 37 TKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKL--KEPIVIAKVDADKY------- 106 (363)
Q Consensus 37 ~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~-C~~~~~~~~~~a~~~~~~--~~~v~~~~vd~~~~------- 106 (363)
...+.++..+.+++- .+++++|.||++||++ |+...|.+.++.+.+++. ..++.+..|+++.+
T Consensus 7 ~l~~~~G~~~~l~~~-------~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 7 SLTTHTGERKTDKDY-------LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp EEEETTSCEEEGGGG-------TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred EEEeCCCCEEeHHHc-------CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 333445555555432 4689999999999997 999999999999988752 12588888888642
Q ss_pred ---------------------hhhhhhCCcCcCC---------------EEEEE-eCCEEEe-ecCCCCHHHHHHHHHhh
Q 017971 107 ---------------------SRLASKQEIDAFP---------------TLKIF-MHGIPTE-YYGPRKAELLVRYLKKF 148 (363)
Q Consensus 107 ---------------------~~l~~~~~i~~~P---------------t~~~~-~~g~~~~-y~g~~~~~~i~~~i~~~ 148 (363)
..+++.|++...| +.+++ ++|+.+. +.|..+.++|.+.+.+.
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATH 159 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 1378899999999 66666 5677654 78888999999888776
Q ss_pred c
Q 017971 149 V 149 (363)
Q Consensus 149 ~ 149 (363)
+
T Consensus 160 l 160 (164)
T 2ggt_A 160 M 160 (164)
T ss_dssp H
T ss_pred H
Confidence 5
No 186
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.98 E-value=5.1e-09 Score=85.51 Aligned_cols=107 Identities=14% Similarity=0.179 Sum_probs=80.8
Q ss_pred ccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChh-hhhHHHHHHHHHHHhhcC--CCCeEEEEEeCccc------
Q 017971 36 ETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKL--KEPIVIAKVDADKY------ 106 (363)
Q Consensus 36 ~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~-C~~~~~~~~~~a~~~~~~--~~~v~~~~vd~~~~------ 106 (363)
....+.++..+.+.+- .+++++|.||++||++ |+...|.+.++.+.+++. ..++.+..|+++.+
T Consensus 9 f~l~~~~G~~~~l~~~-------~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~ 81 (171)
T 2rli_A 9 FHLLDHRGRARCKADF-------RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEA 81 (171)
T ss_dssp CEEEETTSCEEETTTT-------TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHH
T ss_pred eEEEeCCCCEEeHHHh-------CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHH
Confidence 3334445555555532 4689999999999998 999999999999988642 23588888888732
Q ss_pred ----------------------hhhhhhCCcCcCC---------------EEEEE-eCCEEEe-ecCCCCHHHHHHHHHh
Q 017971 107 ----------------------SRLASKQEIDAFP---------------TLKIF-MHGIPTE-YYGPRKAELLVRYLKK 147 (363)
Q Consensus 107 ----------------------~~l~~~~~i~~~P---------------t~~~~-~~g~~~~-y~g~~~~~~i~~~i~~ 147 (363)
..+++.|++...| +++++ ++|+.+. |.|..+.+.|.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 82 MARYVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 2578899999888 66666 5677654 7898999999988877
Q ss_pred hc
Q 017971 148 FV 149 (363)
Q Consensus 148 ~~ 149 (363)
.+
T Consensus 162 ll 163 (171)
T 2rli_A 162 HM 163 (171)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 187
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.98 E-value=9e-10 Score=90.13 Aligned_cols=90 Identities=19% Similarity=0.171 Sum_probs=70.8
Q ss_pred CCCeEEEEEECCCChh-hhhHHHHHHHHHHHhhcCC-CCeEEEEEeCccc----------------------------hh
Q 017971 59 SFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKLK-EPIVIAKVDADKY----------------------------SR 108 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~-C~~~~~~~~~~a~~~~~~~-~~v~~~~vd~~~~----------------------------~~ 108 (363)
++++++|.||++||++ |+...|.+.++.+.+.+.+ .++.+..|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5689999999999997 9999999999998776421 2489999998743 24
Q ss_pred hhhhCC---------------cCcCCEEEEEeCCEEEe-ecCCC--CHHHHHHHHHhh
Q 017971 109 LASKQE---------------IDAFPTLKIFMHGIPTE-YYGPR--KAELLVRYLKKF 148 (363)
Q Consensus 109 l~~~~~---------------i~~~Pt~~~~~~g~~~~-y~g~~--~~~~i~~~i~~~ 148 (363)
+++.|+ +.++|+++++.+|+.+. +.|.. +.+.|.+.+++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 555555 46889999999776554 67776 889999888764
No 188
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.95 E-value=3.5e-10 Score=80.32 Aligned_cols=63 Identities=22% Similarity=0.276 Sum_probs=49.1
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-cchhhhhhCCcCcCCEEEEEeCCEEE
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-KYSRLASKQEIDAFPTLKIFMHGIPT 130 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~-~~~~l~~~~~i~~~Pt~~~~~~g~~~ 130 (363)
.++.||++||++|++..|.++++++.. +.++.+..+|.+ ++.++++++|+.++|++++ +|+..
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE
Confidence 367899999999999999999887543 223556566654 5788899999999999987 77643
No 189
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.94 E-value=3.8e-09 Score=87.41 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=79.2
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---- 105 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---- 105 (363)
+...|+....+.++..+.+.+- ++++++|.||++||++|++..|.+.++.+++++. .+.+..|+++.
T Consensus 26 g~~~p~f~l~~~~G~~~~l~~~-------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~ 96 (181)
T 2p31_A 26 EQDFYDFKAVNIRGKLVSLEKY-------RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQ 96 (181)
T ss_dssp -CCGGGCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTC
T ss_pred CCccCceEeecCCCCEecHHHc-------CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCC
Confidence 4455665555566666665432 5689999999999999999999999999998764 38888998853
Q ss_pred ---c----hhhhhh------------------------CCcCcCC-------EEEEE-eCCEEE-eecCCCCHHHHHHHH
Q 017971 106 ---Y----SRLASK------------------------QEIDAFP-------TLKIF-MHGIPT-EYYGPRKAELLVRYL 145 (363)
Q Consensus 106 ---~----~~l~~~------------------------~~i~~~P-------t~~~~-~~g~~~-~y~g~~~~~~i~~~i 145 (363)
. .+++++ |.+.++| +.+++ ++|+.+ .+.|..+.+.|.+.+
T Consensus 97 e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 176 (181)
T 2p31_A 97 EPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQI 176 (181)
T ss_dssp CCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHH
Confidence 1 122332 2255678 55555 677765 478888999999988
Q ss_pred Hhhc
Q 017971 146 KKFV 149 (363)
Q Consensus 146 ~~~~ 149 (363)
.+.+
T Consensus 177 ~~ll 180 (181)
T 2p31_A 177 TALV 180 (181)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 8764
No 190
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.93 E-value=6.6e-09 Score=86.67 Aligned_cols=110 Identities=15% Similarity=0.088 Sum_probs=79.0
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc------
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK------ 105 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~------ 105 (363)
..|+....+.++..+.+.+ + ++++++|.||++||+.|+...|.+.++.+++.+. .+.+..|++++
T Consensus 27 ~~p~f~l~~~~G~~~~l~~--~-----~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~ 97 (190)
T 2vup_A 27 SIFDFEVLDADHKPYNLVQ--H-----KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEP 97 (190)
T ss_dssp SGGGSCCBBTTSSBCCGGG--G-----TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCC
T ss_pred cccCeEEEcCCCCEEEHHH--c-----CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCC
Confidence 4455555555555444432 1 5689999999999999999999999999998764 38888888762
Q ss_pred -c----hhhh-h-----------------------------hCCcCcCC------EEEEE-eCCEEEe-ecCCCCHHHHH
Q 017971 106 -Y----SRLA-S-----------------------------KQEIDAFP------TLKIF-MHGIPTE-YYGPRKAELLV 142 (363)
Q Consensus 106 -~----~~l~-~-----------------------------~~~i~~~P------t~~~~-~~g~~~~-y~g~~~~~~i~ 142 (363)
. .+++ + .+++.++| +.+++ ++|+.+. +.|..+.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 177 (190)
T 2vup_A 98 GNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIE 177 (190)
T ss_dssp SCHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHH
T ss_pred CCHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHH
Confidence 1 1222 1 14788899 66666 6777654 78988999999
Q ss_pred HHHHhhcC
Q 017971 143 RYLKKFVA 150 (363)
Q Consensus 143 ~~i~~~~~ 150 (363)
+.+.+.+.
T Consensus 178 ~~i~~ll~ 185 (190)
T 2vup_A 178 KKLIPLLE 185 (190)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98887653
No 191
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.93 E-value=3.6e-09 Score=86.68 Aligned_cols=108 Identities=13% Similarity=0.125 Sum_probs=76.7
Q ss_pred CccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-------c
Q 017971 33 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-------K 105 (363)
Q Consensus 33 ~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~-------~ 105 (363)
.|+....+.++..+.+.+- ++++++|.||++||+.|+ ..|.+.++.+++.+. .+.+..|+++ +
T Consensus 12 ~~~f~l~d~~G~~~~l~~~-------~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d 81 (171)
T 3cmi_A 12 FYKLAPVDKKGQPFPFDQL-------KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPG 81 (171)
T ss_dssp GGGCCCBBTTSCBCCGGGG-------TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC-----
T ss_pred eeeeEEEcCCCCEecHHHc-------CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCC
Confidence 4455555555655555432 568999999999999999 999999999998764 3888888763 1
Q ss_pred ----chhhh------------------------------hhCCcCcCC------EEEEE-eCCEEEe-ecCCCCHHHHHH
Q 017971 106 ----YSRLA------------------------------SKQEIDAFP------TLKIF-MHGIPTE-YYGPRKAELLVR 143 (363)
Q Consensus 106 ----~~~l~------------------------------~~~~i~~~P------t~~~~-~~g~~~~-y~g~~~~~~i~~ 143 (363)
..+++ +.|++.++| +.+++ ++|+.+. +.|..+.+.|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 161 (171)
T 3cmi_A 82 SDEEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSE 161 (171)
T ss_dssp -------------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHH
T ss_pred CHHHHHHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 11122 246888999 66666 6777654 788888888888
Q ss_pred HHHhhcC
Q 017971 144 YLKKFVA 150 (363)
Q Consensus 144 ~i~~~~~ 150 (363)
.+.+.+.
T Consensus 162 ~i~~ll~ 168 (171)
T 3cmi_A 162 TIEELLK 168 (171)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8877654
No 192
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.92 E-value=4.6e-09 Score=87.36 Aligned_cols=89 Identities=19% Similarity=0.207 Sum_probs=71.4
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------------chhhhhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------------YSRLASK 112 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 112 (363)
.+++++|.|| ++||++|+...|.+.++.+.+.+. ++.+..|+++. +..+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQ 107 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHH
Confidence 4589999999 999999999999999999998764 38888888764 4568889
Q ss_pred CCcC------cCCEEEEE-eCCEEEe-ecCC----CCHHHHHHHHHhhc
Q 017971 113 QEID------AFPTLKIF-MHGIPTE-YYGP----RKAELLVRYLKKFV 149 (363)
Q Consensus 113 ~~i~------~~Pt~~~~-~~g~~~~-y~g~----~~~~~i~~~i~~~~ 149 (363)
|++. ++|+++++ ++|+... +.|. ++.++|.+.+.+..
T Consensus 108 ~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 108 FDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred hCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9998 99999999 5676553 5554 36777877776554
No 193
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.92 E-value=7.7e-09 Score=84.32 Aligned_cols=112 Identities=14% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---- 105 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---- 105 (363)
+...|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.++.+.+.+. ++.+..|+++.
T Consensus 9 g~~~p~f~l~~~~g~~~~l~~~-------~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~ 79 (170)
T 2p5q_A 9 PESVHDFTVKDAKENDVDLSIF-------KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEE 79 (170)
T ss_dssp -CCGGGCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTC
T ss_pred CccccceEEEcCCCCEecHHHh-------CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCC
Confidence 4445555555666666666542 5689999999999999999999999999998764 48899998852
Q ss_pred ---c----hhhhh-hC-----------------------------Cc--CcCC---EEEEE-eCCEEEe-ecCCCCHHHH
Q 017971 106 ---Y----SRLAS-KQ-----------------------------EI--DAFP---TLKIF-MHGIPTE-YYGPRKAELL 141 (363)
Q Consensus 106 ---~----~~l~~-~~-----------------------------~i--~~~P---t~~~~-~~g~~~~-y~g~~~~~~i 141 (363)
. .++++ ++ ++ .++| +.+++ ++|+.+. +.|..+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l 159 (170)
T 2p5q_A 80 EPGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSL 159 (170)
T ss_dssp CCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGG
T ss_pred CCCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHH
Confidence 1 22233 32 34 5678 76666 5677654 7888888889
Q ss_pred HHHHHhhcC
Q 017971 142 VRYLKKFVA 150 (363)
Q Consensus 142 ~~~i~~~~~ 150 (363)
.+.+.+.+.
T Consensus 160 ~~~i~~ll~ 168 (170)
T 2p5q_A 160 ERDIKQLLE 168 (170)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 888887764
No 194
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.91 E-value=9.5e-09 Score=83.67 Aligned_cols=112 Identities=18% Similarity=0.094 Sum_probs=79.2
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--- 105 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--- 105 (363)
.+...|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.++.+.+.+. .+.+..|+++.
T Consensus 7 ~g~~~p~f~l~~~~G~~~~l~~~-------~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~ 77 (169)
T 2v1m_A 7 SWNSIYEFTVKDINGVDVSLEKY-------RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGG 77 (169)
T ss_dssp CCCSGGGCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTT
T ss_pred CCcccccceeecCCCCCccHHHc-------CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCC
Confidence 34455666666666666666542 5689999999999999999999999999998764 38888998853
Q ss_pred -c-------hhhh-hhC-----------------------------C-----cCcCCEEEEE-eCCEEE-eecCCCCHHH
Q 017971 106 -Y-------SRLA-SKQ-----------------------------E-----IDAFPTLKIF-MHGIPT-EYYGPRKAEL 140 (363)
Q Consensus 106 -~-------~~l~-~~~-----------------------------~-----i~~~Pt~~~~-~~g~~~-~y~g~~~~~~ 140 (363)
+ ...+ +++ + +..+|+.+++ ++|+.+ .+.|..+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~ 157 (169)
T 2v1m_A 78 QEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYD 157 (169)
T ss_dssp CCCSCHHHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGG
T ss_pred CCCCCHHHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHH
Confidence 1 1121 221 3 3345777777 567665 4788888888
Q ss_pred HHHHHHhhc
Q 017971 141 LVRYLKKFV 149 (363)
Q Consensus 141 i~~~i~~~~ 149 (363)
|.+.+.+.+
T Consensus 158 l~~~i~~ll 166 (169)
T 2v1m_A 158 IEGDIMELL 166 (169)
T ss_dssp GHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888877654
No 195
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.91 E-value=3.9e-09 Score=75.61 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=60.5
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccch----hhhhhCC--cCcCCEEEEEeCCEEEeecCCC
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS----RLASKQE--IDAFPTLKIFMHGIPTEYYGPR 136 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~----~l~~~~~--i~~~Pt~~~~~~g~~~~y~g~~ 136 (363)
.++.|+++||++|++..+.+++++.... ++.+..+|.++++ ++.++++ +.++|++ |.+|+.+. |
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~----~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~--~-- 71 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD----DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG--G-- 71 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS----SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE--S--
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC----CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE--C--
Confidence 3678999999999999999999987643 2889999997764 7899999 9999998 45787653 2
Q ss_pred CHHHHHHHHHhhc
Q 017971 137 KAELLVRYLKKFV 149 (363)
Q Consensus 137 ~~~~i~~~i~~~~ 149 (363)
.++|.+++.+..
T Consensus 72 -~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 -YTDFAAWVKENL 83 (85)
T ss_dssp -SHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhc
Confidence 267888877653
No 196
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.89 E-value=1.1e-08 Score=82.63 Aligned_cols=109 Identities=13% Similarity=0.131 Sum_probs=77.1
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCC-eEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc--
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFD-YILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-- 105 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~-~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-- 105 (363)
|...|+....+.++..+.+.+- .++ +++|.|| ++||++|+...|.+.++.+++++. ++.+..|+++.
T Consensus 12 G~~~p~f~l~~~~G~~~~l~~~-------~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~is~d~~~ 82 (160)
T 1xvw_A 12 GATAPDFTLRDQNQQLVTLRGY-------RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND--DSAALAISVGPPP 82 (160)
T ss_dssp TSBCCCCEEECTTSCEEEGGGG-------TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS--SEEEEEEESCCHH
T ss_pred CCCCCCeEeEcCCCCEEeHHHh-------cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CcEEEEEeCCCHH
Confidence 3344554445555555555432 345 9999998 999999999999999999887643 48888888763
Q ss_pred ---------------------chhhhhhCCcC----cCC--EEEEE-eCCEEEe-ecCCC----CHHHHHHHHHh
Q 017971 106 ---------------------YSRLASKQEID----AFP--TLKIF-MHGIPTE-YYGPR----KAELLVRYLKK 147 (363)
Q Consensus 106 ---------------------~~~l~~~~~i~----~~P--t~~~~-~~g~~~~-y~g~~----~~~~i~~~i~~ 147 (363)
+..+++.|++. ++| +.+++ ++|+.+. +.|.. ..+.+.+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 83 THKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp HHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 66789999998 999 66666 5676553 55643 45666666554
No 197
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.88 E-value=1.5e-08 Score=84.29 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=79.5
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---- 105 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---- 105 (363)
+.+.|+....+.++..+.|++ + ++++++|.||++||++|+...|.+.++.+++++.+ +.+..|+++.
T Consensus 23 ~~~~p~f~l~d~~G~~~~l~~--~-----~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~~~~ 93 (187)
T 3dwv_A 23 ASSIFDFEVLDADHKPYNLVQ--H-----KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPSNQFGGQ 93 (187)
T ss_dssp CCSGGGSCCBBTTSCBCCGGG--G-----TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGT--CEEEEEEBCCCSSC
T ss_pred CCccCCeEEEcCCCCEeeHHH--h-----CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCC--eEEEEEECcccCCC
Confidence 344556556666665555543 2 56899999999999999999999999999997653 7777777651
Q ss_pred ----chhh---h---------------------------------hhCCcCcCC---EEEEE-eCCEEE-eecCCCCHHH
Q 017971 106 ----YSRL---A---------------------------------SKQEIDAFP---TLKIF-MHGIPT-EYYGPRKAEL 140 (363)
Q Consensus 106 ----~~~l---~---------------------------------~~~~i~~~P---t~~~~-~~g~~~-~y~g~~~~~~ 140 (363)
..++ + ..+++..+| +.+++ ++|+.+ .+.|..+.+.
T Consensus 94 e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~ 173 (187)
T 3dwv_A 94 EPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKD 173 (187)
T ss_dssp SSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHH
T ss_pred CCCCHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHH
Confidence 1111 1 112345667 77777 577765 4789999999
Q ss_pred HHHHHHhhcC
Q 017971 141 LVRYLKKFVA 150 (363)
Q Consensus 141 i~~~i~~~~~ 150 (363)
|.+.+.+.+.
T Consensus 174 l~~~i~~lL~ 183 (187)
T 3dwv_A 174 IEEKLIPLLG 183 (187)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 9999988865
No 198
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.85 E-value=1.2e-08 Score=85.55 Aligned_cols=90 Identities=13% Similarity=0.067 Sum_probs=73.4
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------------chhhhhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------------YSRLASK 112 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 112 (363)
.+++++|.|| ++||++|+...|.+.++.+.+.+. ++.+..|+++. +..+++.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 121 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQA 121 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHH
Confidence 4589999999 999999999999999999988754 48888888763 4567888
Q ss_pred CCcC-----cCCEEEEEe-CCEEEe-ecCC----CCHHHHHHHHHhhcC
Q 017971 113 QEID-----AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKKFVA 150 (363)
Q Consensus 113 ~~i~-----~~Pt~~~~~-~g~~~~-y~g~----~~~~~i~~~i~~~~~ 150 (363)
|++. ++|+++++. +|+.+. +.|. .+.+++.+.+.+...
T Consensus 122 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9999 999999995 676553 5554 378999999988765
No 199
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.85 E-value=1.8e-08 Score=83.47 Aligned_cols=110 Identities=19% Similarity=0.150 Sum_probs=76.8
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---- 105 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---- 105 (363)
+...|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.++.+++.+. .+.+..|+++.
T Consensus 24 g~~~p~f~l~~~~G~~~~l~~~-------~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~ 94 (183)
T 2obi_A 24 ARSMHEFSAKDIDGHMVNLDKY-------RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQ 94 (183)
T ss_dssp CCSGGGCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTC
T ss_pred cCcccceEEEcCCCCEeeHHHc-------CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECCCCCCC
Confidence 4445555555555655555432 5689999999999999999999999999998764 38888888752
Q ss_pred ---c----hhhhhhC-------------------------------C-----cCcCCEEEEE-eCCEEE-eecCCCCHHH
Q 017971 106 ---Y----SRLASKQ-------------------------------E-----IDAFPTLKIF-MHGIPT-EYYGPRKAEL 140 (363)
Q Consensus 106 ---~----~~l~~~~-------------------------------~-----i~~~Pt~~~~-~~g~~~-~y~g~~~~~~ 140 (363)
. .++++++ + ++..|+.+++ ++|+.+ .|.|..+.+.
T Consensus 95 e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~ 174 (183)
T 2obi_A 95 EPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLV 174 (183)
T ss_dssp CCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHH
T ss_pred CCCCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHH
Confidence 1 1112221 3 3335998888 567665 4788888888
Q ss_pred HHHHHHhh
Q 017971 141 LVRYLKKF 148 (363)
Q Consensus 141 i~~~i~~~ 148 (363)
|.+++.+.
T Consensus 175 l~~~i~~l 182 (183)
T 2obi_A 175 IEKDLPHY 182 (183)
T ss_dssp HHTTSGGG
T ss_pred HHHHHHHh
Confidence 88777654
No 200
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.84 E-value=2.5e-07 Score=80.20 Aligned_cols=192 Identities=14% Similarity=0.114 Sum_probs=121.5
Q ss_pred CCceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHHhhh---hhHHHHh-h--hcchhhhhhcCCC
Q 017971 151 PDVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALKYKK---KAWFAVA-K--DFSEDTMVLYDFD 216 (363)
Q Consensus 151 ~~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~a~~~~~---~~~~~~~-~--~~~~~~~~~~~~~ 216 (363)
..+..+++ .++++.+..... +++|.|+..+ +.+.+++..+.+ ...+..+ . +.+..++..|++.
T Consensus 12 ~~v~~l~~-~~f~~~i~~~~~--~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~ 88 (244)
T 3q6o_A 12 DPLTLLQA-DTVRGAVLGSRS--AWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIP 88 (244)
T ss_dssp SSSEEECT-TTHHHHHSSCSS--EEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCceeCCh-hhHHHHHhhCCC--eEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCC
Confidence 45777766 458877755432 6788887653 346677777765 3333322 1 3467789999999
Q ss_pred CCCeEEEEcCCCC----CcccccCCCCHHHHHHHHHhhc----------CCCcccCChhhHHhhh--cCCCcEEEEEEeC
Q 017971 217 KVPALVALQPSYN----EHNIFYGPFDEEFLEEFIKQNF----------LPLSVPINQDTLNLLK--DDKRKIVLAIVED 280 (363)
Q Consensus 217 ~~p~iv~~~~~~~----~~~~~~g~~~~~~l~~fi~~~~----------~p~~~~lt~~~~~~l~--~~~~~~~i~~~~~ 280 (363)
++|++++|+++.. ....+.| .+.+.|.+||.+.. .|.+...+..++..+. ....+.+++| .+
T Consensus 89 ~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f-~~ 166 (244)
T 3q6o_A 89 GFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIF-EX 166 (244)
T ss_dssp SSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEE-EC
T ss_pred ccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEE-EE
Confidence 9999999986322 2224555 68999999987751 1223344556666544 3334454444 34
Q ss_pred CChhhHHHHHHHHHHHHHh---CCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhh
Q 017971 281 ETEEKSQKLVTTLKAAASA---NRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFML 357 (363)
Q Consensus 281 ~~~~~~~~~~~~l~~~a~~---~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~ 357 (363)
.+... .+.++.. ++++.+..++.. ...+++.||+ .++|++++++++|+....+ ..-..+.|++
T Consensus 167 ~~~~~-------~~~~~~d~~~~~~i~v~~~~~~-~~~l~~~f~v---~~~Pslvl~~~~g~~~~~~---~~~~~r~~~~ 232 (244)
T 3q6o_A 167 GGSYL-------AREVALDLSQHKGVAVRRVLNT-EANVVRKFGV---TDFPSCYLLFRNGSVSRVP---VLMESRSFYT 232 (244)
T ss_dssp TTCCH-------HHHHHHHTTTCTTEEEEEEETT-CHHHHHHHTC---CCSSEEEEEETTSCEEECC---CSSSSHHHHH
T ss_pred CCcch-------HHHHHHHhccCCceEEEEEeCc-hHHHHHHcCC---CCCCeEEEEeCCCCeEeec---cccccHHHHH
Confidence 33321 2223333 334778777765 3679999999 5789999999998766665 3344567777
Q ss_pred hhhc
Q 017971 358 TLLQ 361 (363)
Q Consensus 358 ~~~~ 361 (363)
++|+
T Consensus 233 ~~l~ 236 (244)
T 3q6o_A 233 AYLQ 236 (244)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7775
No 201
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.81 E-value=1.6e-08 Score=84.91 Aligned_cols=89 Identities=9% Similarity=0.103 Sum_probs=71.8
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
++++++|.|| ++||++|+...|.+.++.+.+.+. ++.+..|+++. +.++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 4589999999 999999999999999999988764 38888888763 4578
Q ss_pred hhhCCcC-----cCCEEEEEe-CCEEEe-ecCCC----CHHHHHHHHHhhc
Q 017971 110 ASKQEID-----AFPTLKIFM-HGIPTE-YYGPR----KAELLVRYLKKFV 149 (363)
Q Consensus 110 ~~~~~i~-----~~Pt~~~~~-~g~~~~-y~g~~----~~~~i~~~i~~~~ 149 (363)
++.|++. ++|+.+++. +|+... +.|.. +.++|.+.+.+..
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8999999 999999995 677654 55543 6788888887654
No 202
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.80 E-value=3.1e-08 Score=81.80 Aligned_cols=114 Identities=14% Similarity=0.043 Sum_probs=79.9
Q ss_pred ccCCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-
Q 017971 27 TGRGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK- 105 (363)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~- 105 (363)
...+.+.|+....+.++..+.+++- ++++++|.||++||++|+...|.+.++.+.+.+. .+.+..|+++.
T Consensus 12 ~~~~~~~p~f~l~d~~G~~v~l~~~-------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~ 82 (180)
T 3kij_A 12 KPKINSFYAFEVKDAKGRTVSLEKY-------KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS--HFSVLAFPCNQF 82 (180)
T ss_dssp CCCCCCGGGCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT--SEEEEEEECCCS
T ss_pred cCCcCcccceEEecCCCCEecHHHc-------CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC--CeEEEEEECCcc
Confidence 3445566676667777777766542 5689999999999999999999999999998754 38888888753
Q ss_pred ------c----hhhhhh-CCcC--------------------------cCCE-----EEEEeCCEEE-eecCCCCHHHHH
Q 017971 106 ------Y----SRLASK-QEID--------------------------AFPT-----LKIFMHGIPT-EYYGPRKAELLV 142 (363)
Q Consensus 106 ------~----~~l~~~-~~i~--------------------------~~Pt-----~~~~~~g~~~-~y~g~~~~~~i~ 142 (363)
. .+++++ +++. +.|+ +++-++|+.+ .|.|..+.+.+.
T Consensus 83 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 162 (180)
T 3kij_A 83 GESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIR 162 (180)
T ss_dssp TTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTH
T ss_pred ccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHH
Confidence 2 234444 3321 2565 4444678766 478888877777
Q ss_pred HHHHhhc
Q 017971 143 RYLKKFV 149 (363)
Q Consensus 143 ~~i~~~~ 149 (363)
+.+.+.+
T Consensus 163 ~~i~~lL 169 (180)
T 3kij_A 163 PDIAALV 169 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666553
No 203
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.80 E-value=2.8e-08 Score=84.11 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=52.9
Q ss_pred cCCCCCccccccCCC-CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc
Q 017971 28 GRGLSSEEETKFKID-GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (363)
Q Consensus 28 ~~~~~~~~~~~~~~~-~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~ 104 (363)
..+...|+....+.+ +..+.|++- ++++++|.||++||++|++..|.+.++.+++++. .+.+..|+++
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~-------~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~--g~~vv~v~~d 89 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSL-------RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR--GLVVLGFPCN 89 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECC
T ss_pred hhcCccCceEeeeCCCCCCccHHHc-------CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC--CeEEEEEECC
Confidence 444556666666666 666666542 5689999999999999999999999999998764 3888889885
No 204
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.79 E-value=3.1e-08 Score=82.21 Aligned_cols=111 Identities=17% Similarity=0.102 Sum_probs=76.5
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--- 105 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--- 105 (363)
.+...|+....+.++..+.+.+- ++++++|.||++||++|+...|.+.++.+++++. .+.+..|+++.
T Consensus 25 ~g~~~p~f~l~~~~G~~v~l~~~-------~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d~~~~ 95 (185)
T 2gs3_A 25 CARSMHEFSAKDIDGHMVNLDKY-------RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGK 95 (185)
T ss_dssp GCCCGGGCEEEBTTSCEEEGGGG-------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTT
T ss_pred CCCCcCCceeEcCCCCEeeHHHc-------CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECcccCC
Confidence 34455665555666666666542 5689999999999999999999999999998764 38888888752
Q ss_pred -c-------hhhhhhCCc------------------------------------CcCCEEEEE-eCCEEE-eecCCCCHH
Q 017971 106 -Y-------SRLASKQEI------------------------------------DAFPTLKIF-MHGIPT-EYYGPRKAE 139 (363)
Q Consensus 106 -~-------~~l~~~~~i------------------------------------~~~Pt~~~~-~~g~~~-~y~g~~~~~ 139 (363)
+ .++++++++ +..|+.+++ ++|+.+ .|.|..+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~ 175 (185)
T 2gs3_A 96 QEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPL 175 (185)
T ss_dssp CCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGG
T ss_pred CCCCCHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHH
Confidence 1 223333322 224787777 467655 477877777
Q ss_pred HHHHHHHhh
Q 017971 140 LLVRYLKKF 148 (363)
Q Consensus 140 ~i~~~i~~~ 148 (363)
+|.+.+.+.
T Consensus 176 ~l~~~i~~l 184 (185)
T 2gs3_A 176 VIEKDLPHY 184 (185)
T ss_dssp GGGGGHHHH
T ss_pred HHHHHHHHh
Confidence 777666553
No 205
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.77 E-value=9e-08 Score=73.62 Aligned_cols=95 Identities=14% Similarity=0.081 Sum_probs=80.0
Q ss_pred CCeEEc-ChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEE
Q 017971 43 GKVIEL-DESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTL 121 (363)
Q Consensus 43 ~~v~~l-~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 121 (363)
..+..| +.++++++++.++.++|-|+++||+.| .+.|.++|+.+ . .+.|+.++ ++++++++++. .|++
T Consensus 21 ~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~---d~~F~~t~---~~~v~~~~~v~-~~~v 89 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-P---GVSFGIST---DSEVLTHYNIT-GNTI 89 (124)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T---TSEEEEEC---CHHHHHHTTCC-SSCE
T ss_pred CcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-C---CceEEEEC---hHHHHHHcCCC-CCeE
Confidence 445556 457899999888999999999999988 78999999987 3 38999886 57799999998 8999
Q ss_pred EEEeCC--EEEeecC----CCCHHHHHHHHHhh
Q 017971 122 KIFMHG--IPTEYYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 122 ~~~~~g--~~~~y~g----~~~~~~i~~~i~~~ 148 (363)
.+|++. ....|.| ..+.+.|.+||..+
T Consensus 90 vlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 90 CLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 999975 4667986 78999999999875
No 206
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.74 E-value=6e-08 Score=81.28 Aligned_cols=88 Identities=19% Similarity=0.231 Sum_probs=69.6
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
.+++++|.|| ++||++|+...|.+.++++++++. ++.+..|+++. +.++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 110 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL--GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRL 110 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHH
Confidence 4589999999 999999999999999999988754 38888888763 2468
Q ss_pred hhhCCcC------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhh
Q 017971 110 ASKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 110 ~~~~~i~------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~ 148 (363)
++.|++. .+|+.+++. +|+... +.| .++.+++.+.+...
T Consensus 111 ~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 111 SEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 8899998 899999884 566443 444 35678888887765
No 207
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.74 E-value=2.3e-08 Score=85.19 Aligned_cols=80 Identities=15% Similarity=0.301 Sum_probs=60.9
Q ss_pred CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe-------------------------------------
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD------------------------------------- 102 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd------------------------------------- 102 (363)
++++++.||++||++|+++.|.++++++. ++.+..+.
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC------CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 46899999999999999999999988652 13332221
Q ss_pred ---C----ccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhh
Q 017971 103 ---A----DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 103 ---~----~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~ 148 (363)
| +++..+++++||.++||+ ++.+|. .+.|..+.+.|.+++.+.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~--~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAV-VLSNGT--LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC--EEESCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEE-EEcCCe--EecCCCCHHHHHHHHHHh
Confidence 2 234668889999999999 566774 457888999999988765
No 208
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.71 E-value=6.9e-08 Score=79.23 Aligned_cols=83 Identities=14% Similarity=0.178 Sum_probs=64.3
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC-----------------------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA----------------------------------- 103 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~----------------------------------- 103 (363)
+.++.++.|+++||++|+++.|.+.++.+... ++.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~----~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~ 96 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP----NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSG 96 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCC----CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 34689999999999999999999999887542 255554442
Q ss_pred ----------------------------------ccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhhc
Q 017971 104 ----------------------------------DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 104 ----------------------------------~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~ 149 (363)
.++..+++++||.++||+++ +|+ .+.|..+.+.+.+.+.+.+
T Consensus 97 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~--~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 97 KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA--LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE--EECSCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE--EeeCCCCHHHHHHHHHHHH
Confidence 23445778899999999987 675 5679999999999887654
No 209
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.70 E-value=1.1e-07 Score=77.68 Aligned_cols=112 Identities=16% Similarity=0.188 Sum_probs=78.7
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCCh-hhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---ch
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCG-HCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---YS 107 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~-~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---~~ 107 (363)
..|+....+.++..+.+++- .+++++|.||++||+ +|+...|.+.++.+.+.+.+.++.+..|+++. .+
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~-------~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~ 84 (174)
T 1xzo_A 12 EVEPFTFQNQDGKNVSLESL-------KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKP 84 (174)
T ss_dssp ECCCCEEECTTSCEEETGGG-------TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCH
T ss_pred ccCCcEEEcCCCCEEehhhc-------CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCH
Confidence 34454555556666666542 568999999999999 99999999999999988765458888888762 11
Q ss_pred -------------------------hhhhh----------------CCcCcCCEEEEE-eCCEEEe-ecCCC--CHHHHH
Q 017971 108 -------------------------RLASK----------------QEIDAFPTLKIF-MHGIPTE-YYGPR--KAELLV 142 (363)
Q Consensus 108 -------------------------~l~~~----------------~~i~~~Pt~~~~-~~g~~~~-y~g~~--~~~~i~ 142 (363)
++.+. +++.+.|+.+++ ++|+.+. +.|.. +.++|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~ 164 (174)
T 1xzo_A 85 KQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDII 164 (174)
T ss_dssp HHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHH
T ss_pred HHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHH
Confidence 11112 235678987777 4677654 67765 578899
Q ss_pred HHHHhhcC
Q 017971 143 RYLKKFVA 150 (363)
Q Consensus 143 ~~i~~~~~ 150 (363)
+.+.+.+.
T Consensus 165 ~~l~~ll~ 172 (174)
T 1xzo_A 165 SDVKSAST 172 (174)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 98887653
No 210
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.67 E-value=4.4e-08 Score=83.07 Aligned_cols=81 Identities=21% Similarity=0.215 Sum_probs=61.2
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEE--Ee----------------------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAK--VD---------------------------------- 102 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~--vd---------------------------------- 102 (363)
+.++.++.|+++||++|++++|.++++.+. + +.+.. +.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~--v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----G--ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----T--EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----C--cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 346899999999999999999999987541 1 33322 21
Q ss_pred ----C----ccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhh
Q 017971 103 ----A----DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 103 ----~----~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~ 148 (363)
| +++.++++++||+++||+++ .+|+ .+.|..+.+.|.+++.+.
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLKPADLLRALEET 209 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCCHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCCHHHHHHHHHhc
Confidence 1 13456788999999999988 6775 567888999999988653
No 211
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.66 E-value=1.4e-07 Score=79.27 Aligned_cols=110 Identities=11% Similarity=0.028 Sum_probs=73.9
Q ss_pred ccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCChh-hhhHHHHHHHHHHHhhcC-CCCeEEEEEeCcc------
Q 017971 34 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGH-CKRLAPQLDEAAPILAKL-KEPIVIAKVDADK------ 105 (363)
Q Consensus 34 ~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~-C~~~~~~~~~~a~~~~~~-~~~v~~~~vd~~~------ 105 (363)
|+....+.++..+.+.+- .+++++|.||++||++ |+...|.+.++.+.+... +.++.+..|+++.
T Consensus 22 p~f~l~d~~G~~v~l~~~-------~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~ 94 (200)
T 2b7k_A 22 GPFHLEDMYGNEFTEKNL-------LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPA 94 (200)
T ss_dssp CCCEEEETTSCEEEGGGG-------TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHH
T ss_pred CCEEEEcCCCCEEeHHHc-------CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHH
Confidence 444444555555555431 4689999999999997 999999999988887643 3347777777762
Q ss_pred ----------------------chhhhhhCCcC-cCC---------------EEEEE-eCCEEEe-ecCCCCHHHHHHHH
Q 017971 106 ----------------------YSRLASKQEID-AFP---------------TLKIF-MHGIPTE-YYGPRKAELLVRYL 145 (363)
Q Consensus 106 ----------------------~~~l~~~~~i~-~~P---------------t~~~~-~~g~~~~-y~g~~~~~~i~~~i 145 (363)
...+++.|++. +.| +.+++ ++|+.+. +.|..+.+.+.+.+
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i 174 (200)
T 2b7k_A 95 VLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKI 174 (200)
T ss_dssp HHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHH
T ss_pred HHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHH
Confidence 13467888887 444 55555 5677654 67777777777776
Q ss_pred HhhcC
Q 017971 146 KKFVA 150 (363)
Q Consensus 146 ~~~~~ 150 (363)
.+.+.
T Consensus 175 ~~~l~ 179 (200)
T 2b7k_A 175 VEHVK 179 (200)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 212
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.66 E-value=1.4e-07 Score=79.45 Aligned_cols=89 Identities=13% Similarity=0.160 Sum_probs=69.7
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
.+++++|.|| ++||++|+...|.+.++.+++++. ++.+..|+++. +.++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~--~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI--GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCI 112 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHH
Confidence 4589999999 999999999999999999988753 38888888753 3468
Q ss_pred hhhCCcC------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhhc
Q 017971 110 ASKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKFV 149 (363)
Q Consensus 110 ~~~~~i~------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~~ 149 (363)
++.|++. ++|+.+++. +|+... +.| .++.+++.+.+....
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 8889999 999999995 565443 333 356788888776553
No 213
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.62 E-value=4.2e-08 Score=75.49 Aligned_cols=100 Identities=17% Similarity=0.233 Sum_probs=79.9
Q ss_pred HhhcCCCcee--cCChHHHHHHHHhcCCcccEEEeecCCh-----hHHHHHHHHhhhhhHHHHhhhcchhhhhhcCCCCC
Q 017971 146 KKFVAPDVSI--LNSDAEVSDFVENAGTFFPLFIGFGLDE-----SVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKV 218 (363)
Q Consensus 146 ~~~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (363)
.++.+|+... |++..++++|+..++ +++|||+++. +.+..+|..+ +.+.|+. +.++++++.++++ .
T Consensus 14 ~kq~gP~~~~~~i~s~~e~e~fi~~~~---v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~--t~~~~v~~~~~v~-~ 86 (124)
T 2l4c_A 14 SDGPGAAQEPTWLTDVPAAMEFIAATE---VAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGI--STDSEVLTHYNIT-G 86 (124)
T ss_dssp CCCSCCSCCCEECCSHHHHHHHHHTSS---EEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEE--ECCHHHHHHTTCC-S
T ss_pred HhccCCCCcceEcCCHHHHHHHHhcCC---CEEEEEECCCCChhHHHHHHHHHhC-CCceEEE--EChHHHHHHcCCC-C
Confidence 3566777755 999999999997655 6899998652 3588889888 6666654 4568899999998 6
Q ss_pred CeEEEEcCCCCCcccccC----CCCHHHHHHHHHhhcC
Q 017971 219 PALVALQPSYNEHNIFYG----PFDEEFLEEFIKQNFL 252 (363)
Q Consensus 219 p~iv~~~~~~~~~~~~~g----~~~~~~l~~fi~~~~~ 252 (363)
|++++|++.++....|.| .++.++|.+||..+++
T Consensus 87 ~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 87 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp SCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred CeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 999999987667778886 7899999999998763
No 214
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.60 E-value=1.6e-06 Score=83.34 Aligned_cols=192 Identities=13% Similarity=0.092 Sum_probs=121.1
Q ss_pred CceecCChHHHHHHHHhcCCcccEEEeecCCh--------hHHHHHHHHhhh---hhHHHHh-h--hcchhhhhhcCCCC
Q 017971 152 DVSILNSDAEVSDFVENAGTFFPLFIGFGLDE--------SVMSNLALKYKK---KAWFAVA-K--DFSEDTMVLYDFDK 217 (363)
Q Consensus 152 ~v~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~a~~~~~---~~~~~~~-~--~~~~~~~~~~~~~~ 217 (363)
.+..++. .++++.+.... .+++|.|+..+ +.+.+++..+.+ ...++.+ . +...+++..|++.+
T Consensus 13 ~V~~Lt~-~~f~~~v~~~~--k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 13 PLTLLDA-DSVRPTVLGSS--SAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp SSEEECT-TTHHHHHSSCS--SEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CcEECCh-HHHHHHHHhCC--CeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 5677766 45887775543 26888887653 347777777766 3333322 1 23678899999999
Q ss_pred CCeEEEEcCCC---CCcccccCCCCHHHHHHHHHhhc----------CCCcccCChhhHHhhhcCC--CcEEEEEEeCCC
Q 017971 218 VPALVALQPSY---NEHNIFYGPFDEEFLEEFIKQNF----------LPLSVPINQDTLNLLKDDK--RKIVLAIVEDET 282 (363)
Q Consensus 218 ~p~iv~~~~~~---~~~~~~~g~~~~~~l~~fi~~~~----------~p~~~~lt~~~~~~l~~~~--~~~~i~~~~~~~ 282 (363)
+|++++|.++. .....+.|..+.+.|.+||.+.. .|.+..++..++..+.... .+++++|. +.+
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~-~~~ 168 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFE-RED 168 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEE-CTT
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEec-CCc
Confidence 99999998632 23345567789999999987752 1234456666776655332 34555444 333
Q ss_pred hhhHHHHHHHHHHHHHhC---CCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhh
Q 017971 283 EEKSQKLVTTLKAAASAN---RELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTL 359 (363)
Q Consensus 283 ~~~~~~~~~~l~~~a~~~---~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~ 359 (363)
.. ..+.++..+ +++.+..++..+ ..+++.||+ ..+|++++++.+|+........- -+.|+.+.
T Consensus 169 s~-------~~~~~~ldl~~~~~v~v~~v~~~~-~~l~~kfgV---~~~Pslvl~~~nGk~~~~~v~~~---~r~~~~~~ 234 (519)
T 3t58_A 169 SY-------LGREVTLDLSQYHAVAVRRVLNTE-SDLVNKFGV---TDFPSCYLLLRNGSVSRVPVLVE---SRSFYTSY 234 (519)
T ss_dssp CC-------HHHHHHHHTTTCTTEEEEEEETTC-HHHHHHHTC---CCSSEEEEEETTSCEEECCCSSC---SHHHHHHH
T ss_pred hH-------HHHHHHHHhhccCCeeEEEecCch-HHHHHHcCC---CCCCeEEEEeCCCceeecccccc---cHHHHHHH
Confidence 22 222333333 347777776653 679999999 57899999999997655433322 23555555
Q ss_pred hc
Q 017971 360 LQ 361 (363)
Q Consensus 360 ~~ 361 (363)
|+
T Consensus 235 l~ 236 (519)
T 3t58_A 235 LR 236 (519)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 215
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.60 E-value=2.8e-07 Score=78.63 Aligned_cols=89 Identities=18% Similarity=0.247 Sum_probs=69.8
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
.+++++|.|| ++||+.|+...|.+.++.+++++. ++.+..|+++. +.++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i 132 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV--NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQI 132 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHH
Confidence 4589999999 999999999999999999998754 38888887753 3468
Q ss_pred hhhCCcC------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhhc
Q 017971 110 ASKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKFV 149 (363)
Q Consensus 110 ~~~~~i~------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~~ 149 (363)
++.|++. .+|+++++. +|+... +.| .++.+++.+.+....
T Consensus 133 ~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 133 SRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 8899999 999999994 666443 333 356788887776654
No 216
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.59 E-value=2.1e-07 Score=77.58 Aligned_cols=88 Identities=16% Similarity=0.293 Sum_probs=68.2
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
++++++|.|| ++||++|+...|.+.++.+++++. ++.+..|+++. +.++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER--NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 4589999999 999999999999999999988754 37788887753 3468
Q ss_pred hhhCCcC-----cCCEEEEE-eCCEEEe-ecCC----CCHHHHHHHHHhh
Q 017971 110 ASKQEID-----AFPTLKIF-MHGIPTE-YYGP----RKAELLVRYLKKF 148 (363)
Q Consensus 110 ~~~~~i~-----~~Pt~~~~-~~g~~~~-y~g~----~~~~~i~~~i~~~ 148 (363)
++.|++. .+|+++++ ++|+... +.|. ++.+++.+.+...
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 8899999 89999999 4676543 4442 4567777776544
No 217
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.58 E-value=4.7e-07 Score=73.48 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=72.0
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCC-ChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-----
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPW-CGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----- 105 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~-C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----- 105 (363)
..|+....+.++..+.+.+ . .+++++|.||++| |++|+...|.+.++.+++ . ++.+..|+.+.
T Consensus 23 ~~p~f~l~~~~G~~~~l~~-----~--~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~---~~~vv~is~d~~~~~~ 91 (167)
T 2jsy_A 23 QAPDFTVLTNSLEEKSLAD-----M--KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G---DVNVYTISADLPFAQA 91 (167)
T ss_dssp CCCCCEEEBTTCCEEEHHH-----H--TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S---SCEEEEEECSSGGGTS
T ss_pred cCCceEEECCCCCEeeHHH-----h--CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C---CCEEEEEECCCHHHHH
Confidence 3444444444444444432 1 4679999999999 999999999999999888 2 37777777652
Q ss_pred ------------------chhhhhhCCcCc------CCEEEEEe-CCEEEe-ecCC-----CCHHHHHHHHHhh
Q 017971 106 ------------------YSRLASKQEIDA------FPTLKIFM-HGIPTE-YYGP-----RKAELLVRYLKKF 148 (363)
Q Consensus 106 ------------------~~~l~~~~~i~~------~Pt~~~~~-~g~~~~-y~g~-----~~~~~i~~~i~~~ 148 (363)
+.++++.|++.. .|+.+++. +|+... +.|. .+.+++.+.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 92 RWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp CCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred HHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 345777888876 49988885 566543 4432 2447777777654
No 218
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.58 E-value=5.3e-08 Score=68.94 Aligned_cols=71 Identities=10% Similarity=0.209 Sum_probs=52.4
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhh---hCCcCcCCEEEEEeCCEEEeecCCCCHHH
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLAS---KQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~---~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~ 140 (363)
++.|+++||++|++..+.+++. .+.+..+|+++++++.+ ++++.++|++ +.+|+.+ |..+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~---------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~~---~g~~~~~ 68 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR---------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLSW---SGFRPDM 68 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEEE---ESCCHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC---------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEEE---ecCCHHH
Confidence 6789999999999999888752 16677899988766554 5899999998 3477643 3355667
Q ss_pred HHHHHHhh
Q 017971 141 LVRYLKKF 148 (363)
Q Consensus 141 i~~~i~~~ 148 (363)
|.+++.+.
T Consensus 69 l~~~l~~~ 76 (81)
T 1h75_A 69 INRLHPAP 76 (81)
T ss_dssp HGGGSCCC
T ss_pred HHHHHhcc
Confidence 76665443
No 219
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.58 E-value=5.3e-07 Score=72.83 Aligned_cols=111 Identities=14% Similarity=0.102 Sum_probs=78.7
Q ss_pred CCCCCcccc--ccCCCCCeEEcChhhHHHhHcCCCeEEEEEEC-CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-
Q 017971 29 RGLSSEEET--KFKIDGKVIELDESNFDSAISSFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD- 104 (363)
Q Consensus 29 ~~~~~~~~~--~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~-~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~- 104 (363)
.|...|+.. ..+.++..+.+++- .+++++|.||+ +||++|....|.+.++.+++++.+ +.+..|.++
T Consensus 9 ~G~~~P~f~~~l~~~~G~~~~l~~~-------~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d~ 79 (163)
T 3gkn_A 9 LELPAATFDLPLSLSGGTQTTLRAH-------AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG--AKILGVSRDS 79 (163)
T ss_dssp CCCCGGGGGCCEECSTTCEECSGGG-------TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT--CEEEEEESSC
T ss_pred cCCcCCCccccccCCCCCEEEHHHh-------CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 355667766 66666666655432 45799999998 999999999999999999987654 666666664
Q ss_pred --------------------cchhhhhhCCcCc------------CCEEEEEe-CCEEEe-ecCC---CCHHHHHHHHHh
Q 017971 105 --------------------KYSRLASKQEIDA------------FPTLKIFM-HGIPTE-YYGP---RKAELLVRYLKK 147 (363)
Q Consensus 105 --------------------~~~~l~~~~~i~~------------~Pt~~~~~-~g~~~~-y~g~---~~~~~i~~~i~~ 147 (363)
.+.++++.|++.. .|+.+++. +|+... +.|. ...+++.+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 80 VKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp HHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHH
Confidence 2346778888877 99999995 565542 4442 334666666655
Q ss_pred h
Q 017971 148 F 148 (363)
Q Consensus 148 ~ 148 (363)
.
T Consensus 160 l 160 (163)
T 3gkn_A 160 H 160 (163)
T ss_dssp H
T ss_pred H
Confidence 4
No 220
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.51 E-value=6.2e-07 Score=76.60 Aligned_cols=87 Identities=16% Similarity=0.223 Sum_probs=66.3
Q ss_pred CCCeEEEEEEC-CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy~-~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
.+++++|.||+ +||++|+...|.+.++.+++++.+ +.+..|+++. +..+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 145 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN--CQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEI 145 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHH
Confidence 56899999996 999999999999999999987543 8888887763 2357
Q ss_pred hhhCCcC------cCCEEEEEe-CCEEEe-ecCC----CCHHHHHHHHHh
Q 017971 110 ASKQEID------AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKK 147 (363)
Q Consensus 110 ~~~~~i~------~~Pt~~~~~-~g~~~~-y~g~----~~~~~i~~~i~~ 147 (363)
++.|++. .+|+.+++. +|+.+. +.|. ...+++++.+..
T Consensus 146 ~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 146 SKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 7889998 899999995 566543 4443 345666666644
No 221
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.50 E-value=7.8e-07 Score=71.59 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=67.5
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc----
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD---- 104 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~---- 104 (363)
|...|+....+.++..+.+. +...++++++|.|| +.||+.|....|.+.++.+++++.+ .+..|.++
T Consensus 10 G~~~P~f~l~~~~G~~v~l~-----~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~---~vv~is~d~~~~ 81 (159)
T 2a4v_A 10 GDPIPDLSLLNEDNDSISLK-----KITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA---AVFGLSADSVTS 81 (159)
T ss_dssp TCBCCSCEEECTTSCEEEHH-----HHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC---EEEEEESCCHHH
T ss_pred CCCCCCeEEECCCCCEEeHH-----HHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC---cEEEEeCCCHHH
Confidence 44455555555555544443 22233347888987 8999999999999999999987654 44444442
Q ss_pred -----------------cchhhhhhCCcCcCC-------EEEEEeCCEEEe-ecCCCCH
Q 017971 105 -----------------KYSRLASKQEIDAFP-------TLKIFMHGIPTE-YYGPRKA 138 (363)
Q Consensus 105 -----------------~~~~l~~~~~i~~~P-------t~~~~~~g~~~~-y~g~~~~ 138 (363)
.+..+++.|++...| ++++ ++|+... +.|....
T Consensus 82 ~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 82 QKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp HHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHH
T ss_pred HHHHHHHhCCCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEccCCcc
Confidence 344678889999999 6666 8888664 6675443
No 222
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.50 E-value=3.6e-07 Score=63.34 Aligned_cols=68 Identities=16% Similarity=0.215 Sum_probs=52.6
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhh---hCCcCcCCEEEEEeCCEEEeecCCCCHHH
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLAS---KQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~---~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~ 140 (363)
++.|+++||++|++..+.+++. .+.+..+|.+.++++.+ ++++.++|++.. +|+.+ |..+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~---------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~~---~g~~~~~ 68 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA---------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEHW---SGFRPER 68 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEEE---ESCCHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc---------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeEE---cCCCHHH
Confidence 5779999999999999888753 16677889988876665 899999999974 77542 3356777
Q ss_pred HHHHH
Q 017971 141 LVRYL 145 (363)
Q Consensus 141 i~~~i 145 (363)
|.+++
T Consensus 69 l~~~l 73 (75)
T 1r7h_A 69 IKQLQ 73 (75)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77776
No 223
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.49 E-value=6.5e-07 Score=77.44 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=63.1
Q ss_pred CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC-------------------------------------
Q 017971 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA------------------------------------- 103 (363)
Q Consensus 61 ~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~------------------------------------- 103 (363)
+..++.|+++||++|+++.|.+.++.+. + +|.+..++.
T Consensus 98 k~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g---~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 98 PVIVYVFADPFCPYCKQFWQQARPWVDS--G---KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHT--T---SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CeEEEEEECCCChhHHHHHHHHHHHHhC--C---cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 5689999999999999999999886653 1 355544332
Q ss_pred -------------ccchhhhhhCCcCcCCEEEEEe-CCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 104 -------------DKYSRLASKQEIDAFPTLKIFM-HGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 104 -------------~~~~~l~~~~~i~~~Pt~~~~~-~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
+++.++++++||.++|++++.. +|......|..+.+.|.+++.+...
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC---
T ss_pred ccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHHH
Confidence 1234567889999999999987 4765457899999999998876543
No 224
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.46 E-value=3.4e-06 Score=71.47 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=48.6
Q ss_pred CCccccccCCC-CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc
Q 017971 32 SSEEETKFKID-GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (363)
Q Consensus 32 ~~~~~~~~~~~-~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~ 104 (363)
+.++....+.+ +..+.|++- ++++++|.|||+||+.|+ ..|.++++.+++.+.+ +.+..|.|+
T Consensus 34 ~~pdF~l~d~~~G~~v~Lsd~-------~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g--~~Vlgvs~d 97 (215)
T 2i3y_A 34 TIYDYEAIALNKNEYVSFKQY-------VGKHILFVNVATYCGLTA-QYPELNALQEELKPYG--LVVLGFPCN 97 (215)
T ss_dssp CGGGCEEEBSSSSCEEEGGGG-------TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT--EEEEEEECC
T ss_pred CcCCcEeeeCCCCCEEcHHHh-------CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC--eEEEEEEcc
Confidence 44555555555 666666542 568999999999999998 8999999999987643 888888875
No 225
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.46 E-value=7.4e-07 Score=73.05 Aligned_cols=88 Identities=15% Similarity=0.116 Sum_probs=62.3
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCC-ChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc------
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPW-CGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------ 104 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~-C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~------ 104 (363)
..|+....+.++..+.+.+- ++++++|.||++| |++|+...|.+.++.++ + ++.+..|+.+
T Consensus 23 ~~P~f~l~~~~G~~v~l~~~-------~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~----~v~vv~Is~D~~~~~~ 90 (175)
T 1xvq_A 23 PAPAFTLTGGDLGVISSDQF-------RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S----GATVLCVSKDLPFAQK 90 (175)
T ss_dssp BCCCCEEECTTSCEEEGGGG-------TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T----TCEEEEEESSCHHHHT
T ss_pred cCCCeEEECCCCCEEeHHHc-------CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c----CCEEEEEECCCHHHHH
Confidence 34444444444545444331 4679999999999 99999999999999876 2 3777777765
Q ss_pred --------c--------chhhhhhCCcCcC---------CEEEEEe-CCEEEe
Q 017971 105 --------K--------YSRLASKQEIDAF---------PTLKIFM-HGIPTE 131 (363)
Q Consensus 105 --------~--------~~~l~~~~~i~~~---------Pt~~~~~-~g~~~~ 131 (363)
. +..+++.|++... |+.+++. +|+...
T Consensus 91 ~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~ 143 (175)
T 1xvq_A 91 RFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAY 143 (175)
T ss_dssp TCC------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEE
T ss_pred HHHHHcCCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEE
Confidence 2 3568888999877 8888775 676543
No 226
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.45 E-value=1.6e-06 Score=64.61 Aligned_cols=106 Identities=9% Similarity=0.135 Sum_probs=87.4
Q ss_pred CCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 252 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
.+.+..+|.+++......++++++.|+. ......+.+...+.++++.+++ +.|+.+|.+..+.+++.+++ ...|+
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~~~Pt 78 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWA-EWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSV---LNIPT 78 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEEC-CCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCc---ccCCE
Confidence 3567788999999877777788777764 4677788899999999999986 99999999999999999999 67999
Q ss_pred EEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 331 MVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 331 ~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++..........+....+.+..++..+|+
T Consensus 79 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 79 TLIFVNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred EEEEcCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 9999433356667888888999999988763
No 227
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.43 E-value=3.9e-07 Score=67.87 Aligned_cols=70 Identities=19% Similarity=0.214 Sum_probs=50.3
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc-------hhhhhhCCcCcCCEEEE
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-------SRLASKQEIDAFPTLKI 123 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~-------~~l~~~~~i~~~Pt~~~ 123 (363)
+.+++.++.++ ++.|+++||++|++..+.+++..... +. +..+|++.+ ..+.+.+++.++|++
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~----~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i-- 72 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKE----GL--LEFVDITATSDTNEIQDYLQQLTGARTVPRV-- 72 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCT----TS--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCC----Cc--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--
Confidence 45667776543 67799999999999999988754221 11 555677665 357888999999997
Q ss_pred EeCCEEE
Q 017971 124 FMHGIPT 130 (363)
Q Consensus 124 ~~~g~~~ 130 (363)
|.+|+.+
T Consensus 73 ~~~g~~i 79 (105)
T 1kte_A 73 FIGKECI 79 (105)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 4577654
No 228
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.43 E-value=2.5e-06 Score=69.55 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=79.8
Q ss_pred CCCCc-cccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCCh-hhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc--
Q 017971 30 GLSSE-EETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCG-HCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-- 105 (363)
Q Consensus 30 ~~~~~-~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~-~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-- 105 (363)
|...| +....+.++..+.+.+- .+++++|.||++||+ .|....|.+.++.+.+...+.++.+..|.++.
T Consensus 4 G~~~P~~f~l~d~~G~~v~l~~~-------~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d 76 (170)
T 3me7_A 4 GTYVPGDITLVDSYGNEFQLKNL-------KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKD 76 (170)
T ss_dssp TCBCCTTCEEEETTCCEEEGGGG-------TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTC
T ss_pred CCcCCCCeEEEcCCcCEEchHHh-------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCC
Confidence 34455 55555566666666542 468999999999997 69999999999999886544457777776541
Q ss_pred -----------------------------chhhhhhCC---------cCcCCEEEEEe-CCEEEe-ecCC-CCHHHHHHH
Q 017971 106 -----------------------------YSRLASKQE---------IDAFPTLKIFM-HGIPTE-YYGP-RKAELLVRY 144 (363)
Q Consensus 106 -----------------------------~~~l~~~~~---------i~~~Pt~~~~~-~g~~~~-y~g~-~~~~~i~~~ 144 (363)
...+++.|| +...|+++++. +|+... |.|. .+.++|.+-
T Consensus 77 ~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~ 156 (170)
T 3me7_A 77 TLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNA 156 (170)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHH
Confidence 123555555 34567888885 566553 6774 678899888
Q ss_pred HHhhcCC
Q 017971 145 LKKFVAP 151 (363)
Q Consensus 145 i~~~~~~ 151 (363)
+.+....
T Consensus 157 l~~~~~~ 163 (170)
T 3me7_A 157 LRLARGE 163 (170)
T ss_dssp HHHHTTC
T ss_pred HHHhhcc
Confidence 8887654
No 229
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.43 E-value=9.7e-07 Score=74.85 Aligned_cols=88 Identities=15% Similarity=0.269 Sum_probs=67.7
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
++++++|.|| ++||+.|+...|.+.++++++++. ++.+..|+++. +.++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER--NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 4579999999 999999999999999999988754 37777777653 3568
Q ss_pred hhhCCcC-----cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhh
Q 017971 110 ASKQEID-----AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 110 ~~~~~i~-----~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~ 148 (363)
++.|++. .+|+.+++. +|+... +.| .++.+++.+.+...
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 8899999 899999985 565442 333 24578888777654
No 230
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.42 E-value=2.7e-06 Score=62.97 Aligned_cols=102 Identities=10% Similarity=0.089 Sum_probs=84.2
Q ss_pred CcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEE
Q 017971 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~v 332 (363)
.+.+++.+++.... .++++++.|+ .......+.+...+.++++.+++ +.|+.+|.+..+.+++.+++ ...|+++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEV---MSIPTLI 78 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSBSEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCC---cccCEEE
Confidence 45678888888876 6677777766 45777888999999999999988 99999999999999999999 6799999
Q ss_pred EEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 333 VWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 333 i~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+++..+......+....+.+..++..+|
T Consensus 79 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 79 VFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 9974445667778888889999887765
No 231
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.42 E-value=2.5e-06 Score=66.93 Aligned_cols=105 Identities=7% Similarity=0.056 Sum_probs=86.2
Q ss_pred CCcccCChhhHHhhhc------------CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhh
Q 017971 253 PLSVPINQDTLNLLKD------------DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADT 319 (363)
Q Consensus 253 p~~~~lt~~~~~~l~~------------~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~ 319 (363)
+.+..++..++..... .++++++.|+. ......+.+...+.++++.+++ +.|+.+|.+..+.+++.
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 100 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYA-DWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARD 100 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEEC-TTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHH
Confidence 3456677777765433 35777777764 4677778889999999999986 99999999999999999
Q ss_pred cCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 320 FEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 320 ~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
||+ ...|++++++++|+.....+....+.+..|+..+|.
T Consensus 101 ~~v---~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 101 FGI---QSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp TTC---CSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred cCC---CCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 999 679999999999887788888899999999998875
No 232
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.40 E-value=2.7e-06 Score=62.96 Aligned_cols=102 Identities=8% Similarity=0.145 Sum_probs=82.9
Q ss_pred cccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
+.+++.+++......++++++.|+. ......+.+...+.++++.+++ +.|+.+|.++.+.+++.+|+ ...|++++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 77 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWA-AWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGI---MSIPTLIL 77 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCC---ccccEEEE
Confidence 3467778888777777888877764 4677788889999999999987 99999999999999999999 67899999
Q ss_pred EeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 334 WDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 334 ~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+ .+|+ .....|....+.+..++..+|+
T Consensus 78 ~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 105 (105)
T 1nsw_A 78 F-KGGRPVKQLIGYQPKEQLEAQLADVLQ 105 (105)
T ss_dssp E-ETTEEEEEEESCCCHHHHHHHTTTTTC
T ss_pred E-eCCeEEEEEecCCCHHHHHHHHHHHhC
Confidence 9 5554 5556777777889999888775
No 233
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.39 E-value=3.7e-06 Score=62.84 Aligned_cols=103 Identities=16% Similarity=0.236 Sum_probs=84.8
Q ss_pred CcccCChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 254 LSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 254 ~~~~lt~~~~~~l~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
.+.+++.+++.... ..++++++.|+. ......+.+...+.++++.+++ +.|+.+|.+..+.+++.+|+ ...|++
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a-~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 80 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSR-KNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSL---KGVPQI 80 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEEC-SSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSCEE
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeC-CCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCC---CcCCEE
Confidence 35678888888866 667777777764 4677788899999999999987 99999999999999999999 679999
Q ss_pred EEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 332 VVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 332 vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+++...+......+....+.+..|+...|
T Consensus 81 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 81 LYFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 99964445556777778889999988776
No 234
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.38 E-value=4.3e-06 Score=63.37 Aligned_cols=104 Identities=12% Similarity=0.120 Sum_probs=82.5
Q ss_pred CCCcccCChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 252 LPLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
-+.....|.++++.+.. .++++++.|+.+ .....+.+...+.+++++++++.|+.+|.++.+.+++.+|+ ...|
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 86 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSAT-WCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEV---KSMP 86 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECT-TCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC---CSSS
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECC-CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---cccc
Confidence 44566777888887665 677787777744 67778889999999999998899999999999999999999 6799
Q ss_pred eEEEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 330 KMVVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 330 ~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++++++..+......+. ..+.+..++..+|
T Consensus 87 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 87 TFQFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEEEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 99999443345556666 7888888887764
No 235
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.36 E-value=3.8e-07 Score=73.44 Aligned_cols=110 Identities=12% Similarity=0.178 Sum_probs=70.0
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc--
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-- 105 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-- 105 (363)
.|..+|+....+.++..+.|++- ++++++|.|| ++||+.|....|.+.++.+++++.+ +.+..|+.+.
T Consensus 6 vG~~aPdF~l~~~~G~~~~l~d~-------~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~--~~~v~vs~d~~~ 76 (157)
T 4g2e_A 6 IGELAPDFELPDTELKKVKLSAL-------KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVN--AVVLGISVDPPF 76 (157)
T ss_dssp TTSBCCCCEEEBTTSCEEEGGGG-------TTSCEEEEECSCTTCCC------CCSCGGGGGGGCS--SEEEEEESSCHH
T ss_pred CCCCCcCeEeECCCCCEEeHHHH-------CCCeEEEEecCCCCCCccccchhhcccccccccccC--ceEeeecccchh
Confidence 35667777777778888877652 5688999999 9999999999999998888776543 6666666542
Q ss_pred -------------------chhhhhhCCcC-----------cCCEEEEEe-CCEEE-ee-----cCCCCHHHHHHHHHh
Q 017971 106 -------------------YSRLASKQEID-----------AFPTLKIFM-HGIPT-EY-----YGPRKAELLVRYLKK 147 (363)
Q Consensus 106 -------------------~~~l~~~~~i~-----------~~Pt~~~~~-~g~~~-~y-----~g~~~~~~i~~~i~~ 147 (363)
+.+++++||+. ..|+.++.. +|+.. .+ .+..+.+++.+.+..
T Consensus 77 ~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 77 SNKAFKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp HHHHHHHHTTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 23466677763 356777774 45432 12 244567777777654
No 236
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.35 E-value=2.8e-06 Score=64.81 Aligned_cols=104 Identities=10% Similarity=0.088 Sum_probs=84.5
Q ss_pred CcccCChhhHH-hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 254 LSVPINQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 254 ~~~~lt~~~~~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
.+.+++.+++. .+...++++++.|+. ......+.+...+.++++.+++ +.|+.+|++..+.+++.+++ ...|++
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a-~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~ 79 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYA-PWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSV 79 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCC---CccceE
Confidence 35678888885 466667777777764 4677788889999999999885 99999999999999999999 679999
Q ss_pred EEEeCCCCeeEEEEE----EeehhhhhHhhhhhc
Q 017971 332 VVWDGNENYLTVSIN----VLKTRVCFFMLTLLQ 361 (363)
Q Consensus 332 vi~~~~~~y~~~~~~----~~~~~~~~~~~~~~~ 361 (363)
++++.+|+.....+. ...+.+..|+..+|+
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEEeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 999887765556665 678889999988875
No 237
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.34 E-value=3.8e-06 Score=61.74 Aligned_cols=101 Identities=12% Similarity=0.157 Sum_probs=81.7
Q ss_pred ccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEe
Q 017971 256 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (363)
Q Consensus 256 ~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~ 335 (363)
.+++.+++......++++++.|+ .......+.+...+.++++.++++.|+.+|.+..+.+++.+|+ ...|+++++
T Consensus 2 ~~l~~~~~~~~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~- 76 (104)
T 2e0q_A 2 IHLDSKNFDSFLASHEIAVVDFW-AEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGV---MSLPTVIFF- 76 (104)
T ss_dssp EECCTTTHHHHHHHSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSCEEEEE-
T ss_pred eecCHHHHHHHHhcCCcEEEEEE-CCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCc---cccCEEEEE-
Confidence 46778888876666677777766 4567778888999999999998899999999999999999999 578999999
Q ss_pred CCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 336 GNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 336 ~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.+|+ .....+....+.+..|+..+|.
T Consensus 77 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 4554 4566777778889999888764
No 238
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.34 E-value=5.6e-06 Score=69.72 Aligned_cols=63 Identities=21% Similarity=0.205 Sum_probs=49.3
Q ss_pred CCccccccCCC-CCeEEcChhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc
Q 017971 32 SSEEETKFKID-GKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (363)
Q Consensus 32 ~~~~~~~~~~~-~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~ 104 (363)
+.|+....+.+ +..+.|++- ++++++|.||++||+.| ...|.+.++.+++++.+ +.+..|.|+
T Consensus 16 ~~pdF~l~d~~~G~~v~Ls~~-------kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g--~~vlgvs~d 79 (207)
T 2r37_A 16 TIYEYGALTIDGEEYIPFKQY-------AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG--LVILGFPCN 79 (207)
T ss_dssp CGGGCEEEBTTSSCEEEGGGG-------TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT--EEEEEEECC
T ss_pred ccCCeEeeeCCCCCEEcHHHh-------CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC--EEEEEEECc
Confidence 45665666666 677777543 56899999999999999 68899999999987653 888888875
No 239
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.33 E-value=3.7e-06 Score=62.45 Aligned_cols=102 Identities=8% Similarity=0.102 Sum_probs=82.9
Q ss_pred cccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
+.+++.+++..+...+++.++.|+ .......+.+...+.++++.+++ +.|+.+|.+..+.+++.+|+ ...|++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 78 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRV---MSIPTVIL 78 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ceEccHhHHHHHhcCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCC---CcCCEEEE
Confidence 457788888877666777777766 45677788889999999999886 99999999999999999999 67899999
Q ss_pred EeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 334 WDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 334 ~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+ .+|+ .....+....+.+..|+..+|+
T Consensus 79 ~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 79 F-KDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp E-ETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred E-eCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 9 4554 5567777788899999988875
No 240
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.32 E-value=6.2e-06 Score=64.36 Aligned_cols=104 Identities=9% Similarity=0.050 Sum_probs=84.0
Q ss_pred cccCChhhHHhhhc------------CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcC
Q 017971 255 SVPINQDTLNLLKD------------DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFE 321 (363)
Q Consensus 255 ~~~lt~~~~~~l~~------------~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~g 321 (363)
+.+++.+++..... .++++++.|+. ......+.+...+.++++++++ +.|+.+|.+..+.+++.+|
T Consensus 11 v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a-~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~ 89 (136)
T 2l5l_A 11 VIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYA-DWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFG 89 (136)
T ss_dssp EEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEEC-TTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTT
T ss_pred eEEecchHHHHHHHhhccCccceeecCCCEEEEEEEC-CcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcC
Confidence 45666667765433 35677777664 4677788889999999999986 9999999999899999999
Q ss_pred CCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhcC
Q 017971 322 ANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQF 362 (363)
Q Consensus 322 i~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 362 (363)
+ ...|++++++.+|+.....+....+.+..|+...++-
T Consensus 90 v---~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 90 I---RSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp C---CSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTS
T ss_pred C---CCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhc
Confidence 9 6799999999888766677888889999999887753
No 241
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.32 E-value=7.4e-06 Score=60.41 Aligned_cols=102 Identities=8% Similarity=0.121 Sum_probs=80.9
Q ss_pred cccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEE
Q 017971 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 255 ~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~v 332 (363)
+..++.+++.. +...+++.++.|+. ......+.+...+.++++++++ +.|+.+|.++.+.+++.+|+ ...|+++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 77 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWA-PWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNI---RSIPTVL 77 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEEC-CCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCC---CcccEEE
Confidence 35677788877 44556777777764 5677788889999999999887 99999999998999999999 6789999
Q ss_pred EEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 333 VWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 333 i~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+++.........|....+.+..++.++|
T Consensus 78 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 78 FFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 9863334556778888888988888765
No 242
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.31 E-value=5.3e-06 Score=62.31 Aligned_cols=104 Identities=8% Similarity=0.160 Sum_probs=82.7
Q ss_pred CCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 252 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
.+....++.+++......++++++.|+ .......+.+...+.+++++++++.|+.+|.+..+.+++.+|+ ...|++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFF-AEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENI---TSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTC---CSSSEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCC---CcccEE
Confidence 344567788888887777777777776 4467788889999999999998899999999998999999999 678999
Q ss_pred EEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 332 VVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 332 vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++++.........+. ..+.+..++..+|
T Consensus 84 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 988633344556666 7888999888776
No 243
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.30 E-value=7e-07 Score=67.68 Aligned_cols=67 Identities=10% Similarity=0.156 Sum_probs=50.0
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeE---EEEEeCccch-------hhhhhCCcCcCCE
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIV---IAKVDADKYS-------RLASKQEIDAFPT 120 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~---~~~vd~~~~~-------~l~~~~~i~~~Pt 120 (363)
+.+++.++. ..++.|+++||++|++..+.+++.. +. +..+|++.++ ++.+.+++.++|+
T Consensus 10 ~~~~~~i~~--~~vv~f~~~~Cp~C~~~~~~L~~~~---------~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~ 78 (114)
T 2hze_A 10 EFVQQRLAN--NKVTIFVKYTCPFCRNALDILNKFS---------FKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPR 78 (114)
T ss_dssp HHHHTTCCT--TCEEEEECTTCHHHHHHHHHHTTSC---------BCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHhcc--CCEEEEEeCCChhHHHHHHHHHHcC---------CCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCE
Confidence 445555544 3477799999999999998877543 33 7778888774 7888999999999
Q ss_pred EEEEeCCEEE
Q 017971 121 LKIFMHGIPT 130 (363)
Q Consensus 121 ~~~~~~g~~~ 130 (363)
+++ +|+.+
T Consensus 79 v~i--~g~~i 86 (114)
T 2hze_A 79 IFF--GKTSI 86 (114)
T ss_dssp EEE--TTEEE
T ss_pred EEE--CCEEE
Confidence 743 77655
No 244
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.30 E-value=2.1e-06 Score=71.46 Aligned_cols=86 Identities=16% Similarity=0.253 Sum_probs=63.4
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc----------------------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD---------------------------------- 104 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~---------------------------------- 104 (363)
..++.++.|+++||++|+.+.|.+.++.+.+.+ ++.|-.+...
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~ 100 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA---DVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHK 100 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC---CeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999998877643 4767655442
Q ss_pred ---------------------------------------cchhhhhhCCcCcCCEEEEEeCCEEE-eecCCCCHHHHHHH
Q 017971 105 ---------------------------------------KYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRY 144 (363)
Q Consensus 105 ---------------------------------------~~~~l~~~~~i~~~Pt~~~~~~g~~~-~y~g~~~~~~i~~~ 144 (363)
.+...++++||.++|++++ +|+.. ...|..+.+.+.+.
T Consensus 101 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~ 178 (192)
T 3h93_A 101 EHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKL 178 (192)
T ss_dssp SCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHH
T ss_pred hCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHH
Confidence 0122456679999999987 66543 45577788888777
Q ss_pred HHhhc
Q 017971 145 LKKFV 149 (363)
Q Consensus 145 i~~~~ 149 (363)
+...+
T Consensus 179 i~~l~ 183 (192)
T 3h93_A 179 ADYLI 183 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76553
No 245
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.28 E-value=1.1e-05 Score=59.91 Aligned_cols=102 Identities=15% Similarity=0.177 Sum_probs=81.2
Q ss_pred cccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEE
Q 017971 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 255 ~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~v 332 (363)
+.+++.+++.. +...++++++.|+ .......+.+...+.++++++++ +.|+.+|.+..+.+++.+|+ ...|+++
T Consensus 4 v~~l~~~~f~~~~~~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 79 (108)
T 2trx_A 4 IIHLTDDSFDTDVLKADGAILVDFW-AEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTLL 79 (108)
T ss_dssp EEECCTTTHHHHTTTCSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTC---CSSSEEE
T ss_pred ceecchhhHHHHHHhcCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---cccCEEE
Confidence 56788888874 4455666766665 45677788889999999999886 99999999998999999999 6789999
Q ss_pred EEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 333 VWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 333 i~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++ .+|+ .....|....+.+..|+.+.|.
T Consensus 80 ~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 80 LF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp EE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 99 4554 4566777788889999888763
No 246
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.27 E-value=3.5e-06 Score=66.24 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=86.7
Q ss_pred CCcccCChhhHH-hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 253 PLSVPINQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 253 p~~~~lt~~~~~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
+.+.+++.+++. .+...++++++.|+. ......+.+...+.++++.+++ +.|+.+|++..+.+++.+++ ...|+
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 81 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYS-PACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGV---QGTPT 81 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTC---CEESE
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEEC-CCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCC---CcCCE
Confidence 456788888888 566667788777764 4677888899999999999888 99999999999999999999 67999
Q ss_pred EEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 331 MVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 331 ~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++...+......+....+.+..|+..+|.
T Consensus 82 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 82 FKFFCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 9999554455677788888899999988774
No 247
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.27 E-value=8e-06 Score=60.55 Aligned_cols=102 Identities=12% Similarity=0.180 Sum_probs=81.2
Q ss_pred cccCChhhHHhh-hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEE
Q 017971 255 SVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 255 ~~~lt~~~~~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~v 332 (363)
+.+++.+++... ...++++++.|+. ......+.+...+.++++++++ +.|+.+|.+..+.+++.+|+ ...|+++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWA-PWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGI---RSIPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTC---CSSCEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEEC-CCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCC---CcCCEEE
Confidence 356778888774 4556777777664 4677788889999999999886 99999999998999999999 6789999
Q ss_pred EEeCCC-CeeEEEEEEeehhhhhHhhhhhc
Q 017971 333 VWDGNE-NYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 333 i~~~~~-~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++ +| ......|....+.+..++..+|.
T Consensus 79 ~~~-~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 79 VFK-GGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp EES-SSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred EEe-CCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 984 55 45567777778889999888763
No 248
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.27 E-value=7.9e-06 Score=60.29 Aligned_cols=96 Identities=11% Similarity=0.143 Sum_probs=77.1
Q ss_pred hhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCC
Q 017971 260 QDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGN 337 (363)
Q Consensus 260 ~~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~ 337 (363)
.++++.... .++++++.|+. ......+.+...+.+++++++++.|+.+|.++.+.+++.+++ ...|++++++..
T Consensus 8 ~~~~~~~l~~~~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~g 83 (105)
T 3m9j_A 8 KTAFQEALDAAGDKLVVVDFSA-TWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEV---KSMPTFQFFKKG 83 (105)
T ss_dssp HHHHHHHHHHTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTC---CBSSEEEEEETT
T ss_pred HHHHHHHHHhcCCCeEEEEEEC-CCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCC---CcCcEEEEEECC
Confidence 456665444 56777777764 467778889999999999999999999999999999999999 679999999655
Q ss_pred CCeeEEEEEEeehhhhhHhhhhh
Q 017971 338 ENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 338 ~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+......+. ..+.+..++..+|
T Consensus 84 ~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 84 QKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEEEESS-CHHHHHHHHHHHC
T ss_pred eEEEEEeCC-CHHHHHHHHHHhC
Confidence 555666777 8888998888765
No 249
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.26 E-value=2.9e-06 Score=70.74 Aligned_cols=43 Identities=21% Similarity=0.458 Sum_probs=36.5
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~ 104 (363)
.++++++.||++||++|+++.|.+.++.+.+.+ ++.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ---DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC---CeEEEEEecc
Confidence 457899999999999999999999999887644 4888888764
No 250
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=1.4e-06 Score=67.61 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=49.8
Q ss_pred hhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc---h----hhhhhCCcCcCCEEE
Q 017971 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---S----RLASKQEIDAFPTLK 122 (363)
Q Consensus 50 ~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~---~----~l~~~~~i~~~Pt~~ 122 (363)
.+.+++++..++ ++.|+++||++|++..+.+.+.. +.+..+|++.+ + ++.+.+++.++|+++
T Consensus 17 ~~~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~---------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 17 VNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp HHHHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT---------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred HHHHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC---------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 455777776654 34499999999999999888753 34556777655 3 377889999999984
Q ss_pred EEeCCEEE
Q 017971 123 IFMHGIPT 130 (363)
Q Consensus 123 ~~~~g~~~ 130 (363)
.+|+.+
T Consensus 86 --i~G~~i 91 (130)
T 2cq9_A 86 --VNGTFI 91 (130)
T ss_dssp --ETTEEE
T ss_pred --ECCEEE
Confidence 477655
No 251
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.24 E-value=3.6e-06 Score=62.46 Aligned_cols=98 Identities=7% Similarity=0.079 Sum_probs=68.8
Q ss_pred hhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCC
Q 017971 260 QDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNEN 339 (363)
Q Consensus 260 ~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~ 339 (363)
.+++......++++++.|+.+ .....+.+...+.+++++++++.|+.+|.++.+.+++.+|+ ...|++++++....
T Consensus 8 ~~~~~~~~~~~~~vlv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~~ 83 (105)
T 4euy_A 8 IEELATYIEEQQLVLLFIKTE-NCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAV---FTGPTVLLFYNGKE 83 (105)
T ss_dssp --CCSSSTTCSSEEEEEEEES-SCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC------------CCCCEEEEEETTEE
T ss_pred HHHHHHHHhcCCCEEEEEeCC-CCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCC---CCCCEEEEEeCCeE
Confidence 345555556667777777654 67778888999999999998899999999999999999999 67999999974334
Q ss_pred eeEEEEEEeehhhhhHhhhhhc
Q 017971 340 YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 340 y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.....+....+.+..++.++|+
T Consensus 84 ~~~~~g~~~~~~l~~~l~~~~e 105 (105)
T 4euy_A 84 ILRESRFISLENLERTIQLFEE 105 (105)
T ss_dssp EEEEESSCCHHHHHHHHHTTC-
T ss_pred EEEEeCCcCHHHHHHHHHHhhC
Confidence 5666788888999999988764
No 252
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.24 E-value=1.1e-05 Score=59.28 Aligned_cols=99 Identities=16% Similarity=0.168 Sum_probs=75.5
Q ss_pred cCCh-hhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 257 PINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 257 ~lt~-~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
+++. +++..... .+++.++.|+ .......+.+...+.+++++++++.|+.+|.+..+.+++.+|+ ...|++++
T Consensus 3 ~i~~~~~~~~~l~~~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 78 (104)
T 2vim_A 3 VLATAADLEKLINENKGRLIVVDFF-AQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSV---TAMPTFVF 78 (104)
T ss_dssp ECCSHHHHHHHHHTTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ecCCHHHHHHHHHhcCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCC---ccccEEEE
Confidence 4444 66666544 5677777776 4467778888999999999998899999999999999999999 67899999
Q ss_pred EeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 334 WDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 334 ~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++.........| ...+.+..++..+|
T Consensus 79 ~~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 974333445555 56778888887654
No 253
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.24 E-value=2e-06 Score=68.11 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=50.0
Q ss_pred hhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc---h----hhhhhCCcCcCCEEE
Q 017971 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---S----RLASKQEIDAFPTLK 122 (363)
Q Consensus 50 ~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~---~----~l~~~~~i~~~Pt~~ 122 (363)
.+.+++++.+++ + +.|+++||++|++..+.+.++. +.+..+|++.+ + ++++.+++.++|+++
T Consensus 39 ~~~~~~~i~~~~-V-vvf~~~~Cp~C~~~k~~L~~~~---------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 39 VNQIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp HHHHHHHHHHCS-E-EEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred HHHHHHHhcCCC-E-EEEECCCChhHHHHHHHHHHcC---------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 466777776653 3 3499999999999999988753 33455676654 3 378889999999984
Q ss_pred EEeCCEEE
Q 017971 123 IFMHGIPT 130 (363)
Q Consensus 123 ~~~~g~~~ 130 (363)
.+|+.+
T Consensus 108 --i~G~~i 113 (146)
T 2ht9_A 108 --VNGTFI 113 (146)
T ss_dssp --ETTEEE
T ss_pred --ECCEEE
Confidence 477655
No 254
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.24 E-value=1.3e-05 Score=60.16 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=83.4
Q ss_pred CCcccCChhhHHhh-hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 253 PLSVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 253 p~~~~lt~~~~~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
..+.+++.+++... ...++++++.|+. ......+.+...+.+++..+++ +.|+.+|.+..+.+++.+|+ ...|+
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt 82 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWA-SWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKV---EGVPA 82 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEEC-TTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTC---CSSSE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEEC-CCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCC---CceeE
Confidence 34677888888864 4566777777764 4667778888999999999886 99999999999999999999 67899
Q ss_pred EEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 331 MVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 331 ~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++ .+|+ .....+....+.+..|+..+|.
T Consensus 83 ~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 83 LRLV-KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEE-cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 9999 5554 4556777788899999888764
No 255
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.23 E-value=1.7e-05 Score=59.29 Aligned_cols=100 Identities=9% Similarity=0.103 Sum_probs=80.3
Q ss_pred cccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEE
Q 017971 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~ 334 (363)
....+.+++......++++++.|+.+ .....+.+...+.+++++++++.|+.+|.+..+.+++.+++ ...|+++++
T Consensus 9 ~~~~~~~~f~~~~~~~k~vlv~f~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~ 84 (109)
T 3f3q_A 9 TQFKTASEFDSAIAQDKLVVVDFYAT-WCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEV---SAMPTLLLF 84 (109)
T ss_dssp EECCSHHHHHHHTTSSSCEEEEEECT-TCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEEE
T ss_pred cCCCCHHHHHHHHhcCCEEEEEEECC-cCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CccCEEEEE
Confidence 34566788888777788888877744 67778889999999999999999999999999999999999 679999999
Q ss_pred eCCC-CeeEEEEEEeehhhhhHhhhhh
Q 017971 335 DGNE-NYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 335 ~~~~-~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+ +| ......+. ..+.+..++..+|
T Consensus 85 ~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 85 K-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp E-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred E-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 8 55 44455555 5678888877654
No 256
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.22 E-value=1.2e-05 Score=59.54 Aligned_cols=101 Identities=6% Similarity=0.091 Sum_probs=79.9
Q ss_pred cccCChhhHHhh-hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEE
Q 017971 255 SVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 255 ~~~lt~~~~~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~v 332 (363)
+.+++.+++... ...++++++.|+ .......+.+...+.++++++++ +.|+.+|.++.+.+++.+|+ ...|+++
T Consensus 4 v~~l~~~~~~~~~~~~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 79 (107)
T 2i4a_A 4 TLAVSDSSFDQDVLKASGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQV---RSIPTLM 79 (107)
T ss_dssp EEECCTTTHHHHTTTCSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTC---CSSSEEE
T ss_pred eeecchhhhhHHHHhCCCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCC---CccCEEE
Confidence 567788888754 455667776666 45677788889999999998875 99999999998999999999 6799999
Q ss_pred EEeCCCC-eeEEEEEEeehhhhhHhhhhh
Q 017971 333 VWDGNEN-YLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 333 i~~~~~~-y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++ .+|+ .....|....+.+..++...|
T Consensus 80 ~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 80 LV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp EE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred EE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 99 5554 555677778888888887654
No 257
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.20 E-value=2.8e-05 Score=61.56 Aligned_cols=109 Identities=14% Similarity=0.134 Sum_probs=84.8
Q ss_pred CCeEEcChhhHHHhHcCCCeEEEE-EECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC--ccchhhhhhCCcCc--
Q 017971 43 GKVIELDESNFDSAISSFDYILVD-FYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDA-- 117 (363)
Q Consensus 43 ~~v~~l~~~~f~~~l~~~~~~lv~-fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~--~~~~~l~~~~~i~~-- 117 (363)
.-|.++|.+|..++..++-+..+. |....-..-..+.+.+.++|+.+++. +.|+.+|. +++..+.+.||+..
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk---i~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK---ILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT---CEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc---eEEEEEecchHhHHHHHHHcCCCccc
Confidence 358999999999988776666555 44434444677899999999988764 99999999 66667889999986
Q ss_pred CCEEEEEeC---CEEEeec-CCCCHHHHHHHHHhhcCCCce
Q 017971 118 FPTLKIFMH---GIPTEYY-GPRKAELLVRYLKKFVAPDVS 154 (363)
Q Consensus 118 ~Pt~~~~~~---g~~~~y~-g~~~~~~i~~~i~~~~~~~v~ 154 (363)
.|++.++.. +..+.+. +..+.+.|.+|+.+++...+.
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 899999874 4444444 788999999999999876653
No 258
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.20 E-value=1.6e-05 Score=60.36 Aligned_cols=105 Identities=13% Similarity=0.116 Sum_probs=83.4
Q ss_pred CCCcccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 252 LPLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 252 ~p~~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
-+.+..++.+++.. +...++++++.|+ .......+.+...+.++++++.+ +.|+.+|.++.+.+++.+++ ...|
T Consensus 12 ~~~~~~~~~~~f~~~v~~~~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 87 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNSETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEV---SAVP 87 (119)
T ss_dssp CSEEECCSHHHHHHHTTTCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTC---CSSS
T ss_pred ceEEEecChhhHHHHHHcCCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCC---Cccc
Confidence 34567788888876 4456677777776 44677788889999999998875 99999999998999999999 6799
Q ss_pred eEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++++ .+|+ .....+....+.+..|+..+|.
T Consensus 88 t~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 88 TVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp EEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 99999 4554 4556677778889999887763
No 259
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.20 E-value=1.2e-05 Score=63.55 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=86.1
Q ss_pred CcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEE
Q 017971 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~v 332 (363)
.+..++.+++......++++++.|+.+ .....+.+...+.++++++.+ +.|+.+|.++.+.+++.|++ ...|+++
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~-wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 114 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAP-WCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRI---RSIPTIM 114 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECS-SCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECC-CCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCC---CccCEEE
Confidence 356788888888777778888877744 667778889999999999876 99999999999999999999 6799999
Q ss_pred EEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 333 VWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 333 i~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++.........+....+.+..|+...|+
T Consensus 115 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 115 LYRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 99644455667788888999999988875
No 260
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.18 E-value=3.8e-06 Score=62.54 Aligned_cols=67 Identities=15% Similarity=0.305 Sum_probs=49.9
Q ss_pred hhHHHhHcCCCeEEEEEEC-----CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCcCcCCEE
Q 017971 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPTL 121 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~-----~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~~Pt~ 121 (363)
+.+++.++.++ ++ .|+. +||++|++..+.+.+.. +.+..+|.++++. +.+.+++.++|++
T Consensus 8 ~~~~~~i~~~~-vv-vf~~g~~~~~~C~~C~~~~~~L~~~~---------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 8 ERLKVLTNKAS-VM-LFMKGNKQEAKCGFSKQILEILNSTG---------VEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp HHHHHHHTSSS-EE-EEESBCSSSBCTTHHHHHHHHHHHHT---------CCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHhccCC-EE-EEEecCCCCCCCccHHHHHHHHHHCC---------CCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 45677776654 43 4777 99999999999887652 6678889988766 4555789999998
Q ss_pred EEEeCCEEE
Q 017971 122 KIFMHGIPT 130 (363)
Q Consensus 122 ~~~~~g~~~ 130 (363)
|.+|+.+
T Consensus 77 --~i~g~~i 83 (105)
T 2yan_A 77 --YVKGELV 83 (105)
T ss_dssp --EETTEEE
T ss_pred --EECCEEE
Confidence 4577654
No 261
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.18 E-value=1.3e-05 Score=60.76 Aligned_cols=106 Identities=7% Similarity=0.146 Sum_probs=83.4
Q ss_pred CCCcccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 252 LPLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 252 ~p~~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
...+.+++.+++.. +...++++++.|+. ......+.+...+.++++++++ +.|+.+|++..+.+++.+|+ ...|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~~~P 86 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWA-TWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQV---VSIP 86 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEEC-CCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCC---CcCC
Confidence 34567788888875 44566777777664 4677788899999999999876 99999999999999999999 6789
Q ss_pred eEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++++.........+....+.+..|+..+|.
T Consensus 87 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 87 TLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred EEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999733345667777778889988877664
No 262
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.18 E-value=9.4e-06 Score=60.94 Aligned_cols=102 Identities=10% Similarity=0.055 Sum_probs=82.0
Q ss_pred cccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
+.+++.+++.... .++++++.|+. ......+.+...+.++++++++ +.|+.+|.+..+.+++.+|+ ...|++++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a-~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~ 77 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWA-PWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGV---MSIPTLLV 77 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEEC-TTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTC---CSBSEEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---CcccEEEE
Confidence 3567888888766 66777777664 4566677788888999988875 99999999998999999999 67999999
Q ss_pred EeCCCC-eeEEEEEEeehhhhhHhhhhhcC
Q 017971 334 WDGNEN-YLTVSINVLKTRVCFFMLTLLQF 362 (363)
Q Consensus 334 ~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~ 362 (363)
+ .+|+ .....|....+.+..|+...+..
T Consensus 78 ~-~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 78 L-KDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp E-ETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred E-eCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9 5664 56678888889999999887754
No 263
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.16 E-value=1.4e-05 Score=63.99 Aligned_cols=103 Identities=10% Similarity=0.123 Sum_probs=83.4
Q ss_pred cccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
+.+++..++......++++++.|+. ......+.+...+.++++++++ +.|+.+|.++++.+++.||+ ...|++++
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a-~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i---~~~Pt~~~ 124 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWA-PWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRI---QGIPAFIL 124 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTC---CSSSEEEE
T ss_pred CccCCHHHHHHHHhCCCcEEEEEEC-CCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCC---CcCCEEEE
Confidence 4577888888766667788887774 4667778889999999999875 99999999999999999999 67999999
Q ss_pred EeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 334 WDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 334 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++.........+....+.+..|+..+|.
T Consensus 125 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 125 FHKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EeCCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 9533345567788888899999988775
No 264
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.16 E-value=2e-05 Score=58.93 Aligned_cols=104 Identities=12% Similarity=0.185 Sum_probs=82.0
Q ss_pred CcccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 254 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 254 ~~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
.+..++.+++.. +...++++++.|+. ......+.+...+.++++++++ +.|+.+|.+..+.+++.+|+ ...|++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 81 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWA-AWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGV---MSIPTL 81 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEEC-CCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCC---CcccEE
Confidence 356778888765 44566777777764 4677778889999999999876 99999999999999999999 678999
Q ss_pred EEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 332 VVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 332 vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++..........|....+.+..++..+|.
T Consensus 82 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 998543345667777778899999888774
No 265
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.16 E-value=1.3e-05 Score=61.64 Aligned_cols=101 Identities=8% Similarity=0.042 Sum_probs=80.1
Q ss_pred cccCCh-hhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 255 SVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 255 ~~~lt~-~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
+.+++. +++......++++++.|+. ......+.+...+.+++++++++.|+.+|.++.+.+++.+++ ...|++++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a-~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTA-VWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRV---LQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEEC-TTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEEC-CcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CcccEEEE
Confidence 567776 7887766777788877774 467777888999999999998899999999999999999999 67999998
Q ss_pred EeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 334 WDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 334 ~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+. +|+ .....+ ...+.+..++..+|.
T Consensus 97 ~~-~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 AR-SGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EE-TTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred Ee-CCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 84 553 444555 566788888887764
No 266
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.15 E-value=1.5e-05 Score=61.56 Aligned_cols=102 Identities=15% Similarity=0.180 Sum_probs=81.3
Q ss_pred cccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEE
Q 017971 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 255 ~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~v 332 (363)
+.+++.+++.. +...++++++.|+ .......+.+...+.++++++++ +.|+.+|.++.+.+++.+++ ...|+++
T Consensus 24 v~~l~~~~f~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 99 (128)
T 2o8v_B 24 IIHLTDDSFDTDVLKADGAILVDFW-AEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTLL 99 (128)
T ss_dssp SEEECTTTHHHHTTTCSSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTC---CSSSEEE
T ss_pred cEecChhhHHHHHHhcCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CccCEEE
Confidence 55678888875 4455666666665 44677788889999999999886 99999999998899999999 6799999
Q ss_pred EEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 333 VWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 333 i~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++ .+|+ .....+....+.+..|+..+|.
T Consensus 100 ~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 100 LF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp EE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 99 5564 4567777788899999988763
No 267
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.15 E-value=1.4e-05 Score=62.06 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=82.5
Q ss_pred ccCChhhHHhhhcCCC-cEEEEEEeCCCh--hhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 256 VPINQDTLNLLKDDKR-KIVLAIVEDETE--EKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 256 ~~lt~~~~~~l~~~~~-~~~i~~~~~~~~--~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
+++|.++++....... ++++.|..+ -. ...+.+..++.++++++.+ +.|+.||.++++.+...||+ ...|++
T Consensus 18 ~~vt~~~F~~~v~~~~~~vlVdF~A~-wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV---~siPTl 93 (137)
T 2qsi_A 18 TLVDEATVDDFIAHSGKIVVLFFRGD-AVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGV---AVCPSL 93 (137)
T ss_dssp EEECTTTHHHHHHTSSSEEEEEECCC-TTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTC---CSSSEE
T ss_pred cccCHhHHHHHHhcCCCcEEEEEeCC-ccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCC---ccCCEE
Confidence 3778888887554444 777766643 44 5667889999999999987 99999999999999999999 789999
Q ss_pred EEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 332 VVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 332 vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++|+....-....|-..++.+..++...|
T Consensus 94 ilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99988777777778888888888887765
No 268
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.14 E-value=7.2e-06 Score=63.25 Aligned_cols=103 Identities=13% Similarity=0.140 Sum_probs=83.5
Q ss_pred CcccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 254 LSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 254 ~~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
.+.+++.+++.. +...++++++.|+.+ .....+.+...+.++++++++ +.|+.+|.+..+.+++.+++ ...|++
T Consensus 18 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~ 93 (130)
T 2dml_A 18 DVIELTPSNFNREVIQSDGLWLVEFYAP-WCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGV---QGFPTI 93 (130)
T ss_dssp SSEECCTTTHHHHTTTCSSCEEEEEECT-TCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTC---CSSSEE
T ss_pred CcEECCHHHHHHHHhcCCCeEEEEEECC-CCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCC---CccCEE
Confidence 356788888887 556667777777644 555666778888999999888 99999999999999999999 679999
Q ss_pred EEEeCCCC-eeEEEEEEeehhhhhHhhhhh
Q 017971 332 VVWDGNEN-YLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 332 vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++++.+++ .....+....+.+..|+...|
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 99999886 777778888888888887765
No 269
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.14 E-value=1.6e-05 Score=62.35 Aligned_cols=104 Identities=11% Similarity=0.068 Sum_probs=71.1
Q ss_pred CCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 253 p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
+.+.+++.+++......+..+++ .|........+.+...+.+++.++++ +.|+.+|.+.++.+++.+++ ...|++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv-~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 108 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLV-DFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGV---RSVPTL 108 (140)
T ss_dssp ----------------CCCEEEE-EEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CccccCCHHHHHHHHHcCCCEEE-EEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCC---CccCEE
Confidence 44567777777765444445444 44455777788899999999999985 99999999999999999999 679999
Q ss_pred EEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 332 VVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 332 vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++. +|+ .....+....+.+..|+..+|.
T Consensus 109 ~~~~-~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 109 VLFR-RGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEEE-TTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEe-CCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 9995 554 5566777778899999988875
No 270
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.13 E-value=2.6e-05 Score=57.51 Aligned_cols=100 Identities=12% Similarity=0.116 Sum_probs=74.6
Q ss_pred ccCCh-hhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CcEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 256 VPINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 256 ~~lt~-~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
.+++. +++..... .+++.++.|+. ......+.+...+++++++++ ++.|+.+|.++.+.+++.+|+ ...|++
T Consensus 3 ~~l~~~~~~~~~l~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 78 (106)
T 1xwb_A 3 YQVKDKADLDGQLTKASGKLVVLDFFA-TWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNI---SSMPTF 78 (106)
T ss_dssp EECCSHHHHHHHHHHHTTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred eecCCHHHHHHHHHhcCCCEEEEEEEC-CcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCC---CcccEE
Confidence 34555 66666444 56677766664 467778888999999999985 599999999999999999999 678999
Q ss_pred EEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 332 VVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 332 vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++++.........+ ...+.+..++..+|
T Consensus 79 ~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 98864334445556 56677888877654
No 271
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.13 E-value=1.4e-05 Score=68.09 Aligned_cols=88 Identities=13% Similarity=0.191 Sum_probs=64.4
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
++++++|.|| ++||+.|+...|.+.++.+++++.+ +.+..|.++. +..+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~--v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKN--VELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 4579999999 9999999999999999998886533 6666666542 1245
Q ss_pred hhhCCc-----CcCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhh
Q 017971 110 ASKQEI-----DAFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 110 ~~~~~i-----~~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~ 148 (363)
++.|++ ...|+.+++. +|+... +.| .++.+++.+.+...
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 667787 3689999995 565443 333 35678888877654
No 272
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=1.1e-05 Score=62.36 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=82.9
Q ss_pred CCcccCChhhHHhhh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC----C-cEEEEEeccCchhHHhhcCCCCCC
Q 017971 253 PLSVPINQDTLNLLK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----E-LVFCYVGIKQFADFADTFEANKKS 326 (363)
Q Consensus 253 p~~~~lt~~~~~~l~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~----~-~~f~~vd~~~~~~~~~~~gi~~~~ 326 (363)
..+.+++.+++.... ..++++++.|+ .......+.+...+.+++++++ + +.|+.+|++..+.+++.+++ .
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~ 82 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGI---R 82 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTC---C
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCC---C
Confidence 346778888888743 55666666665 4467777888888888888765 4 99999999998999999999 6
Q ss_pred CCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 327 KLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 327 ~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
..|++++++..+......+....+.+..|+..+|+
T Consensus 83 ~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 83 GFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp SSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred eeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 79999999985456667788888899999888764
No 273
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.11 E-value=2.2e-05 Score=59.70 Aligned_cols=104 Identities=11% Similarity=0.114 Sum_probs=81.6
Q ss_pred CCCcccCChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCC
Q 017971 252 LPLSVPINQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 327 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~----~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~ 327 (363)
.+.+...+.+++..... .++++++.|+. ......+.+...+.+++++++++.|+.+|.++.+.+++.+|+ ..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 87 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTA-SWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSV---EA 87 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCC---Cc
Confidence 45566677777776433 46777777764 467778888999999999998899999999999999999999 67
Q ss_pred CCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 328 LPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 328 ~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.|+++++. +|+ .....+.. .+.+..|+..+|.
T Consensus 88 ~Pt~~~~~-~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 88 MPTFLFMK-EGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SSEEEEEE-TTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred ccEEEEEe-CCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 99999885 553 45566766 8889999888764
No 274
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.11 E-value=6e-06 Score=67.85 Aligned_cols=88 Identities=14% Similarity=0.150 Sum_probs=62.7
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---------------------chhhhhhCCcC
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------------------YSRLASKQEID 116 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---------------------~~~l~~~~~i~ 116 (363)
.+++++|.|| +.||+.|....|.+.++.+++++.+ +.+..|.++. +..+++.|++.
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~--~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~ 127 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQIN--ATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVI 127 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTT--EEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCc
Confidence 4578889998 9999999999999999999987653 6677676542 34577778875
Q ss_pred c------------CCEEEEEe-CCEEEe-ecC---CCCHHHHHHHHHhh
Q 017971 117 A------------FPTLKIFM-HGIPTE-YYG---PRKAELLVRYLKKF 148 (363)
Q Consensus 117 ~------------~Pt~~~~~-~g~~~~-y~g---~~~~~~i~~~i~~~ 148 (363)
. .|+.+++. +|+... +.+ ....+++++.+++.
T Consensus 128 ~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 128 KEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 3 58888885 566542 433 23456666666543
No 275
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.09 E-value=1.5e-06 Score=70.42 Aligned_cols=114 Identities=14% Similarity=0.136 Sum_probs=76.2
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc---
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--- 104 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~--- 104 (363)
.|..+|+...++.++..+.|+ +...+++++++.|| ++||++|....|.+.++.+++++.+ +.+..|..+
T Consensus 7 vG~~aPdF~l~~~~G~~v~Ls-----d~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~--v~vv~is~d~~~ 79 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFEPVNLY-----EVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN--AEVLAISVDSPW 79 (164)
T ss_dssp TTSBCCCCEEEBTTSCEEEHH-----HHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS--SEEEEEESSCHH
T ss_pred CCCCCcCcEeECCCCCEEEHH-----HHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC--ceEEEecCCCHH
Confidence 355667766666666666554 33446788888888 9999999999999988888877654 666666643
Q ss_pred ------------------cchhhhhhCCcC----------cCCEEEEEe-CCEEE-ee-----cCCCCHHHHHHHHHhhc
Q 017971 105 ------------------KYSRLASKQEID----------AFPTLKIFM-HGIPT-EY-----YGPRKAELLVRYLKKFV 149 (363)
Q Consensus 105 ------------------~~~~l~~~~~i~----------~~Pt~~~~~-~g~~~-~y-----~g~~~~~~i~~~i~~~~ 149 (363)
.+.++++.||+. ..|+.++.. +|+.. .+ .+..+.+++++-+++..
T Consensus 80 ~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 80 CLKKFKDENRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp HHHHHHHHTTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 234567778773 367777775 45432 22 23346777777776653
No 276
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.09 E-value=2.4e-05 Score=63.01 Aligned_cols=107 Identities=12% Similarity=0.029 Sum_probs=67.9
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEEC-CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--- 105 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~-~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--- 105 (363)
+...|+....+.++..+.+.+- ++++++|.||+ .||++|....|.+.++.+++ .++.+..|.++.
T Consensus 19 G~~~P~f~l~~~~G~~v~l~~~-------~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~----~~v~vv~is~d~~~~ 87 (163)
T 1psq_A 19 GDKALDFSLTTTDLSKKSLADF-------DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL----DNTVVLTVSMDLPFA 87 (163)
T ss_dssp TSBCCCCEEECTTSCEEEGGGG-------TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC----TTEEEEEEESSCHHH
T ss_pred CCCCCCEEEEcCCCcEeeHHHh-------CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc----CCcEEEEEECCCHHH
Confidence 3344555555555555555432 45799999995 99999999999999988766 236666665432
Q ss_pred --------------------chhhhhhCCcC----c--CCEEEEEe-CCEEEe-ecC-----CCCHHHHHHHHHh
Q 017971 106 --------------------YSRLASKQEID----A--FPTLKIFM-HGIPTE-YYG-----PRKAELLVRYLKK 147 (363)
Q Consensus 106 --------------------~~~l~~~~~i~----~--~Pt~~~~~-~g~~~~-y~g-----~~~~~~i~~~i~~ 147 (363)
+..+++.|++. + .|+.+++. +|+... +.| ....+++.+.+++
T Consensus 88 ~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 88 QKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp HHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 23456667765 3 38888885 565443 433 2334666666653
No 277
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.09 E-value=2e-05 Score=63.55 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=49.7
Q ss_pred CCCeEEEEEE-CCCChhhh-hHHHHHHHHHHHhhcCCCCeE-EEEEeCc-----------------------cchhhhhh
Q 017971 59 SFDYILVDFY-APWCGHCK-RLAPQLDEAAPILAKLKEPIV-IAKVDAD-----------------------KYSRLASK 112 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~-~~~~~~~~~a~~~~~~~~~v~-~~~vd~~-----------------------~~~~l~~~ 112 (363)
++++++|.|| +.||+.|. ...|.+.++.+++++.+ +. +..|..+ .+.++++.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~--v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG--VTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHA 111 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHH
Confidence 4578999999 89999999 89999999998887544 44 4444332 23446677
Q ss_pred CCcC------c-----CCEEEEEeCCEE
Q 017971 113 QEID------A-----FPTLKIFMHGIP 129 (363)
Q Consensus 113 ~~i~------~-----~Pt~~~~~~g~~ 129 (363)
||+. + .|+.+++.+|+.
T Consensus 112 ~gv~~~~~~~g~~~~~~p~~~vid~G~i 139 (162)
T 1tp9_A 112 LGLELDLQEKGLGTRSRRFALLVDDLKV 139 (162)
T ss_dssp TTCEEEETTTTSEEEECCEEEEEETTEE
T ss_pred cCcccccccCCCCccceeEEEEEECCEE
Confidence 7775 2 688888776654
No 278
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.09 E-value=3.4e-06 Score=64.25 Aligned_cols=70 Identities=9% Similarity=0.211 Sum_probs=50.9
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhH-HHHHHHHHHHhhcCCCCeEEEEEeCccch-------hhhhhCCcCcCCEEE
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIVIAKVDADKYS-------RLASKQEIDAFPTLK 122 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~-~~~~~~~a~~~~~~~~~v~~~~vd~~~~~-------~l~~~~~i~~~Pt~~ 122 (363)
+.+++.+..++ ++.|+++||++|++. .+.+++... ..+.+..+|.+.++ ++.+.+++.++|++
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v- 86 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV------PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI- 86 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC------CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE-
Confidence 45666665543 556999999999998 777665431 12667788887764 58888999999997
Q ss_pred EEeCCEEE
Q 017971 123 IFMHGIPT 130 (363)
Q Consensus 123 ~~~~g~~~ 130 (363)
|.+|+.+
T Consensus 87 -fi~g~~i 93 (118)
T 3c1r_A 87 -YINGKHI 93 (118)
T ss_dssp -EETTEEE
T ss_pred -EECCEEE
Confidence 5678765
No 279
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.08 E-value=6e-05 Score=61.24 Aligned_cols=68 Identities=15% Similarity=0.197 Sum_probs=52.5
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCCCh-hhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCG-HCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~C~-~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~ 104 (363)
+...|+....+.++..+.+++ | ++++++|.||.+||+ .|....+.+.++.+.+++.+.++.+..|.++
T Consensus 9 ~~~~PdF~L~d~~G~~v~l~d--~-----~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 9 NWDLETFQFTNQDGKPFGTKD--L-----KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp CBCCCCCEEECTTSCEEEHHH--H-----TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCcCCCcEEECCCCCEEeHHH--h-----CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 334566666666776666643 2 678999999999996 7999999999999888776667888877765
No 280
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.07 E-value=6.1e-06 Score=59.65 Aligned_cols=70 Identities=16% Similarity=0.165 Sum_probs=51.5
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-----cc----hhhhhhCCcCcCCEEEEEeCCEEEeec
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-----KY----SRLASKQEIDAFPTLKIFMHGIPTEYY 133 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~-----~~----~~l~~~~~i~~~Pt~~~~~~g~~~~y~ 133 (363)
.++.|+++||++|++..+.+++.. +.+-.+|.+ +. +++.+.+++.++|++++ +|+.+
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g---------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~i--- 78 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG---------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKHV--- 78 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEEE---
T ss_pred eEEEEECCCChHHHHHHHHHHHcC---------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEEE---
Confidence 367799999999999988887653 334445655 33 66777889999999987 67533
Q ss_pred CCCCHHHHHHHHH
Q 017971 134 GPRKAELLVRYLK 146 (363)
Q Consensus 134 g~~~~~~i~~~i~ 146 (363)
|..+.+.|.+++.
T Consensus 79 ~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 79 LGYNEEKLKELIR 91 (92)
T ss_dssp ESCCHHHHHHHHH
T ss_pred eCCCHHHHHHHhc
Confidence 3458888888874
No 281
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.07 E-value=3.7e-05 Score=58.86 Aligned_cols=104 Identities=14% Similarity=0.148 Sum_probs=80.4
Q ss_pred cccCChhhHH-----hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CcEEEEEe--ccCchhHHhhcCCCCCC
Q 017971 255 SVPINQDTLN-----LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVG--IKQFADFADTFEANKKS 326 (363)
Q Consensus 255 ~~~lt~~~~~-----~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd--~~~~~~~~~~~gi~~~~ 326 (363)
+..++..++. .....++++++.|+ .......+.+...+.+++++++ ++.|+.+| .+..+.+++.+|+ .
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v---~ 81 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFK-TDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDA---N 81 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTC---C
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCC---c
Confidence 3445555544 44455677777766 4467778888999999999985 49999999 8888889999999 6
Q ss_pred CCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhcC
Q 017971 327 KLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQF 362 (363)
Q Consensus 327 ~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~ 362 (363)
..|++++++++|+ .....+....+.+..++...+.-
T Consensus 82 ~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 82 IVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp SSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred ceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 7999999998876 44567778888999998887753
No 282
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.06 E-value=3.5e-05 Score=59.19 Aligned_cols=102 Identities=11% Similarity=0.137 Sum_probs=81.0
Q ss_pred CCcccCChhhHHhhhc-CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhC-----CC-cEEEEEeccCchhHHhhcCCCCC
Q 017971 253 PLSVPINQDTLNLLKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASAN-----RE-LVFCYVGIKQFADFADTFEANKK 325 (363)
Q Consensus 253 p~~~~lt~~~~~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~-----~~-~~f~~vd~~~~~~~~~~~gi~~~ 325 (363)
..+.+++.+++..... .++++++.|+. .-....+.+...+.++|..+ .+ +.|+.+|+++++.+++.+++
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v--- 90 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFVLYYV-PWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRV--- 90 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTC---
T ss_pred CceEECChhhHHHHHhCCCCCEEEEEEC-CccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCC---
Confidence 4567889999988654 46777777664 46677788888999888643 23 99999999999999999999
Q ss_pred CCCCeEEEEeCCCCe--eEEEEEEeehhhhhHhhh
Q 017971 326 SKLPKMVVWDGNENY--LTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 326 ~~~P~~vi~~~~~~y--~~~~~~~~~~~~~~~~~~ 358 (363)
...|++++++.+++- ...++....+.+..|+..
T Consensus 91 ~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~ 125 (127)
T 3h79_A 91 SGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp CSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHh
Confidence 679999999987642 567788889999998865
No 283
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.06 E-value=3.1e-05 Score=57.62 Aligned_cols=100 Identities=8% Similarity=0.100 Sum_probs=80.4
Q ss_pred CcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC----CcEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----ELVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~----~~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
.+..+|.+++..... ++++++.|+ .......+.+...+.++++.+. ++.|+.+|++..+.+++.+++ ...|
T Consensus 6 ~v~~l~~~~~~~~~~-~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~P 80 (111)
T 3uvt_A 6 TVLALTENNFDDTIA-EGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSV---RGYP 80 (111)
T ss_dssp CSEECCTTTHHHHHH-SSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred cceEcChhhHHHHhc-CCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCC---Cccc
Confidence 466788888888666 556666665 4577788889999999998864 499999999999999999999 6799
Q ss_pred eEEEEeCCCCeeEEEEEEeehhhhhHhhh
Q 017971 330 KMVVWDGNENYLTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 330 ~~vi~~~~~~y~~~~~~~~~~~~~~~~~~ 358 (363)
+++++...+......+....+.+..|+.+
T Consensus 81 t~~~~~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 81 TLLLFRGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHH
T ss_pred EEEEEeCCcEEEeccCCcCHHHHHHHHHh
Confidence 99999655556677788888888888764
No 284
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.06 E-value=2.1e-05 Score=63.57 Aligned_cols=106 Identities=11% Similarity=0.047 Sum_probs=69.2
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--- 105 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--- 105 (363)
+..+|+....+.++..+.|++- .+++++|.|| +.||++|....|.+.++.++ .++.+..|.++.
T Consensus 23 G~~aP~f~l~~~~G~~~~l~~~-------~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-----~~~~vv~is~d~~~~ 90 (166)
T 3p7x_A 23 GDFAPDFTVLDNDLNQVTLADY-------AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-----EEGIVLTISADLPFA 90 (166)
T ss_dssp TSBCCCCEEECTTSCEEEGGGG-------TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-----TTSEEEEEESSCHHH
T ss_pred CCCCCCeEEEcCCCCEEeHHHh-------CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-----CCCEEEEEECCCHHH
Confidence 4455666666666666666542 4578999999 78999999999999988765 225666565432
Q ss_pred --------------------chhhhhhCCcCc------CCEEEEEe-CCEEEe-ec-----CCCCHHHHHHHHHh
Q 017971 106 --------------------YSRLASKQEIDA------FPTLKIFM-HGIPTE-YY-----GPRKAELLVRYLKK 147 (363)
Q Consensus 106 --------------------~~~l~~~~~i~~------~Pt~~~~~-~g~~~~-y~-----g~~~~~~i~~~i~~ 147 (363)
+..+++.|++.. .|+.+++. +|+... +. +..+.+++.+.+++
T Consensus 91 ~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 91 QKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp HHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred HHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 335566677764 79988885 565432 22 23455677666543
No 285
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.06 E-value=4.6e-05 Score=56.41 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=73.9
Q ss_pred ChhhHHhhh--cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeC
Q 017971 259 NQDTLNLLK--DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 336 (363)
Q Consensus 259 t~~~~~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~ 336 (363)
+.+++.... ..++++++.|+. ......+.+...+.+++++++++.|+.+|.++.+.+++.+|+ ...|+++++..
T Consensus 8 ~~~~~~~~~~~~~~~~v~v~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~ 83 (107)
T 1gh2_A 8 SDPDFQPELSGAGSRLAVVKFTM-RGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNI---SATPTFQFFRN 83 (107)
T ss_dssp SGGGHHHHHHHTTTSCEEEEEEC-SSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSSEEEEEET
T ss_pred CHHHHHHHHHhCCCCEEEEEEEC-CCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCC---CcccEEEEEEC
Confidence 456777655 456777777664 467778888999999999997899999999999999999999 67999999954
Q ss_pred CCCeeEEEEEEeehhhhhHhhhhh
Q 017971 337 NENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 337 ~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
........|.. ..++..++..+|
T Consensus 84 G~~~~~~~G~~-~~~l~~~l~~~l 106 (107)
T 1gh2_A 84 KVRIDQYQGAD-AVGLEEKIKQHL 106 (107)
T ss_dssp TEEEEEEESSC-HHHHHHHHHHHH
T ss_pred CeEEEEEeCCC-HHHHHHHHHHhc
Confidence 43344555633 455888887765
No 286
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.04 E-value=4.5e-06 Score=60.01 Aligned_cols=57 Identities=19% Similarity=0.391 Sum_probs=45.1
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc--cchhhhhhC-CcCcCCEEEEEeCCEEE
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD--KYSRLASKQ-EIDAFPTLKIFMHGIPT 130 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~-~i~~~Pt~~~~~~g~~~ 130 (363)
.++.|+++||++|++..+.+++.. +.+..+|.+ ..+++.+.+ ++.++|+++ .+|+.+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~---------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~i 66 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG---------VKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYHV 66 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT---------CCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEEC
T ss_pred eEEEEECCCChhHHHHHHHHHHcC---------CCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEEE
Confidence 467899999999999998887642 556778887 567788888 999999985 477643
No 287
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.04 E-value=4.3e-05 Score=60.85 Aligned_cols=103 Identities=9% Similarity=0.100 Sum_probs=79.3
Q ss_pred CCcccCC-hhhHHhhhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 253 PLSVPIN-QDTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 253 p~~~~lt-~~~~~~l~~~--~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
..+.+++ .+++..+... ++++++.|+. ......+.+...+.+++++++++.|+.+|+++.+.+++.+|+ ...|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a-~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~P 87 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWA-PWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEI---SSVP 87 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSS
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEEC-CCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCC---CCCC
Confidence 3455555 4667665554 6777777764 467778889999999999998899999999999999999999 6799
Q ss_pred eEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++++ +|+. ....+ ...+.+..|+..+|.
T Consensus 88 t~~~~~-~G~~~~~~~G-~~~~~l~~~i~~~l~ 118 (153)
T 2wz9_A 88 TFLFFK-NSQKIDRLDG-AHAPELTKKVQRHAS 118 (153)
T ss_dssp EEEEEE-TTEEEEEEES-SCHHHHHHHHHHHSC
T ss_pred EEEEEE-CCEEEEEEeC-CCHHHHHHHHHHHhc
Confidence 999999 7653 33444 456778888888775
No 288
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.04 E-value=2.7e-05 Score=64.34 Aligned_cols=89 Identities=18% Similarity=0.103 Sum_probs=63.3
Q ss_pred CCCeEEEEEEC-CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------------chhhhhh
Q 017971 59 SFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------------YSRLASK 112 (363)
Q Consensus 59 ~~~~~lv~fy~-~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 112 (363)
.+++++|.||+ .||+.|....|.+.++.+++++.+ +.+..|.++. +..+++.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~--v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 106 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLG--VDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRN 106 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTT--EEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHH
Confidence 45899999995 999999999999999998887543 6777666542 1235566
Q ss_pred CCcC------cCCEEEEEe-CCEEEe-ecCC----CCHHHHHHHHHhhc
Q 017971 113 QEID------AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKKFV 149 (363)
Q Consensus 113 ~~i~------~~Pt~~~~~-~g~~~~-y~g~----~~~~~i~~~i~~~~ 149 (363)
|++. ..|+.+++. +|+... +.|. ++.+++.+.+....
T Consensus 107 ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 107 FDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 7776 369999986 565443 4443 35777877776553
No 289
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.03 E-value=5.4e-05 Score=56.48 Aligned_cols=102 Identities=11% Similarity=0.118 Sum_probs=77.1
Q ss_pred CCcccCChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEecc-CchhHHhhcCCCCCCCCC
Q 017971 253 PLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKLP 329 (363)
Q Consensus 253 p~~~~lt~~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~-~~~~~~~~~gi~~~~~~P 329 (363)
..+.+++.+++..... .++++++.|+. ......+.+...+.+++++++++.|+.+|.+ ..+.+++.+|+ ...|
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a-~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v---~~~P 80 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFT-QWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVVP 80 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SBSS
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEEC-CcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCC---Ceee
Confidence 3466788888887554 46777777764 4677778889999999999989999999998 67889999999 6789
Q ss_pred eEEEEeCCCC-eeEEEEEEeehhhhhHhhhhh
Q 017971 330 KMVVWDGNEN-YLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 330 ~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+++++ .+|+ .....+.. .+.+..++..++
T Consensus 81 t~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 81 TFKIL-KENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp EEEEE-SSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEEE-eCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 97666 5554 33445543 677888877665
No 290
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.03 E-value=3e-05 Score=66.79 Aligned_cols=70 Identities=14% Similarity=0.256 Sum_probs=51.6
Q ss_pred CCCeEEEEEE-CCCChhhh-hHHHHHHHHHHHhhcCCCCe-EEEEEeCcc----------------------chhhhhhC
Q 017971 59 SFDYILVDFY-APWCGHCK-RLAPQLDEAAPILAKLKEPI-VIAKVDADK----------------------YSRLASKQ 113 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~-~~~~~~~~~a~~~~~~~~~v-~~~~vd~~~----------------------~~~l~~~~ 113 (363)
++++++|.|| ++||++|+ ...|.+.++.+++++.+ + .+..|+.+. +..+++.|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG--VDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 4578999999 99999999 99999999998887654 6 566665432 23467777
Q ss_pred CcC-----------cCCEEEEEeCCEEE
Q 017971 114 EID-----------AFPTLKIFMHGIPT 130 (363)
Q Consensus 114 ~i~-----------~~Pt~~~~~~g~~~ 130 (363)
|+. ..|+.+++++|+..
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li~~G~i~ 137 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLVKNGVVE 137 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEEETTEEE
T ss_pred CceeecccccCcccceeEEEEEECCEEE
Confidence 775 34776666777654
No 291
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.02 E-value=8.7e-06 Score=64.47 Aligned_cols=81 Identities=19% Similarity=0.264 Sum_probs=60.4
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe------------------------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD------------------------------------ 102 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd------------------------------------ 102 (363)
+.+.+++.|+.++|++|+++.+.++++. ++.+.-.+
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l~--------~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKMT--------DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTCC--------SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhcC--------ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 4578999999999999999999976541 13332211
Q ss_pred ------C----ccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 103 ------A----DKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 103 ------~----~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
| +++..+++++||.++||+++ .+|+ ...|..+.+.|.+++.+...
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~--~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR--TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC--EEESCCCTTHHHHHHHHTSC
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE--EeeCCCCHHHHHHHHHHHHH
Confidence 1 12456788899999999998 6676 36688888999998887654
No 292
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.01 E-value=5.4e-05 Score=57.09 Aligned_cols=100 Identities=13% Similarity=0.227 Sum_probs=75.6
Q ss_pred cccCCh-hhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 255 SVPINQ-DTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 255 ~~~lt~-~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
+.+++. +++..... .++++++.|+. ......+.+...+.++++++ ++.|+.+|.++.+.+++.+|+ ...|++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a-~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v---~~~Pt~ 89 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFA-TWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNI---SAMPTF 89 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEEC-TTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTC---CSSSEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEEC-CCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCC---CccceE
Confidence 456665 67766544 56777777664 46777888899999999988 899999999999999999999 679999
Q ss_pred EEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 332 VVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 332 vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++++.........+ ...+.+..++..+|
T Consensus 90 ~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 99853333444555 56677888877654
No 293
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.01 E-value=1.3e-05 Score=62.73 Aligned_cols=103 Identities=11% Similarity=0.134 Sum_probs=81.4
Q ss_pred CcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC----cEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~----~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
.+..++.+++......++++++.|+ .......+.+...+.++++.+++ +.|+.+|+.+...+++.+++ ...|
T Consensus 18 ~v~~l~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~P 93 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADKDTVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDV---SGYP 93 (140)
T ss_dssp TEEECCTTTHHHHHTTCSEEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTC---CSSS
T ss_pred CCEEcChHhHHHHHhcCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCC---CccC
Confidence 3667788888887777777776665 44667777788888888876543 99999999999999999999 6799
Q ss_pred eEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++++ .+|+.....+....+.+..|+...|.
T Consensus 94 t~~~~-~~G~~~~~~g~~~~~~l~~~l~~~~~ 124 (140)
T 2dj1_A 94 TIKIL-KKGQAVDYDGSRTQEEIVAKVREVSQ 124 (140)
T ss_dssp EEEEE-ETTEEEECCSCCCHHHHHHHHHHHHS
T ss_pred eEEEE-ECCcEEEcCCCCCHHHHHHHHHHhcC
Confidence 99999 45666667788888899999988775
No 294
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.00 E-value=5.7e-05 Score=57.60 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=78.9
Q ss_pred CCCcccCChhhHHhhhc--CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEecc-CchhHHhhcCCCCCCCC
Q 017971 252 LPLSVPINQDTLNLLKD--DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKL 328 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~-~~~~~~~~~gi~~~~~~ 328 (363)
...+.+++.+++..... .++++++.|+ .......+.+...+.+++++++++.|+.+|.. +.+.+++.+|+ ...
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v---~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCC---Cee
Confidence 34466788888876543 5677777776 45677788889999999999999999999998 57889999999 678
Q ss_pred CeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 329 PKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 329 P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
|+++++..........+.. .+++..++..+++
T Consensus 93 Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~~ 124 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGAK-YDKLLEAIQAARS 124 (124)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHTC
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 9988875433334455554 6788888877653
No 295
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.00 E-value=9.4e-06 Score=61.20 Aligned_cols=68 Identities=15% Similarity=0.368 Sum_probs=47.5
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc----hh----hhhhCCcCcCCEEE
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----SR----LASKQEIDAFPTLK 122 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~----~~----l~~~~~i~~~Pt~~ 122 (363)
+.+++.++.++ ++.|+++||++|++..+.+.+.. +.+..+|.+.. ++ +.+..|..++|++
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~---------i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i- 77 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRLG---------VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV- 77 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHTT---------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHcC---------CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE-
Confidence 44566666655 66799999999999998887642 44456676542 33 4555699999998
Q ss_pred EEeCCEEEe
Q 017971 123 IFMHGIPTE 131 (363)
Q Consensus 123 ~~~~g~~~~ 131 (363)
|.+|+.+.
T Consensus 78 -fi~g~~ig 85 (113)
T 3rhb_A 78 -FVCGKHIG 85 (113)
T ss_dssp -EETTEEEE
T ss_pred -EECCEEEc
Confidence 55786553
No 296
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.00 E-value=5.1e-05 Score=64.52 Aligned_cols=106 Identities=13% Similarity=0.153 Sum_probs=88.1
Q ss_pred CCCcccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 252 LPLSVPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 252 ~p~~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
.+.+..+|.+++.. +...++++++.|+.+ -....+.+...+.++++++++ +.|+.+|++..+.+++.+++ ...|
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~-wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 86 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAE-WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIP 86 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECT-TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTC---CSBS
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECC-cCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCC---CcCC
Confidence 44567889999987 566777888877744 677788899999999999988 99999999999999999999 6899
Q ss_pred eEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++++..+......+....+.+..|+..+|+
T Consensus 87 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 87 TLLLFKNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred EEEEEECCeEEEEeccccChHHHHHHHHhhcc
Confidence 99999754455677788888999999988775
No 297
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.99 E-value=3.2e-05 Score=62.81 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=66.5
Q ss_pred CCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-----
Q 017971 32 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----- 105 (363)
Q Consensus 32 ~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----- 105 (363)
..|+....+.++..+.+++- .+++++|.|| +.||+.|....|.+.++.+++ .++.+..|.++.
T Consensus 26 ~~P~f~l~~~~G~~~~l~~~-------~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~----~~v~vv~Is~d~~~~~~ 94 (171)
T 2yzh_A 26 RAPEAVVVTKDLQEKIVGGA-------KDVVQVIITVPSLDTPVCETETKKFNEIMAGM----EGVDVTVVSMDLPFAQK 94 (171)
T ss_dssp BCCCEEEEETTSCEEEESSC-------CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC----TTEEEEEEESSCHHHHH
T ss_pred cCCceEEECCCCCEeeHHHh-------CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc----CCceEEEEeCCCHHHHH
Confidence 34444444455555555432 4578999999 899999999999999988766 236666665432
Q ss_pred ------------------chhhhhhCCcCc---------CCEEEEEe-CCEEEe-ecC-----CCCHHHHHHHHHh
Q 017971 106 ------------------YSRLASKQEIDA---------FPTLKIFM-HGIPTE-YYG-----PRKAELLVRYLKK 147 (363)
Q Consensus 106 ------------------~~~l~~~~~i~~---------~Pt~~~~~-~g~~~~-y~g-----~~~~~~i~~~i~~ 147 (363)
+..+ +.|++.. .|+.+++. +|+... +.| ..+.+++.+.+++
T Consensus 95 ~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ 169 (171)
T 2yzh_A 95 RFCESFNIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKE 169 (171)
T ss_dssp HHHHHTTCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHH
T ss_pred HHHHHcCCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHh
Confidence 2345 6666642 58888886 565442 432 3445677776654
No 298
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.99 E-value=2.7e-05 Score=63.13 Aligned_cols=67 Identities=13% Similarity=0.100 Sum_probs=45.2
Q ss_pred CCCCcccccc-CCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhh-HHHHHHHHHHHhhcCCCCe-EEEEEeCc
Q 017971 30 GLSSEEETKF-KIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKR-LAPQLDEAAPILAKLKEPI-VIAKVDAD 104 (363)
Q Consensus 30 ~~~~~~~~~~-~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~-~~~~~~~~a~~~~~~~~~v-~~~~vd~~ 104 (363)
+..+|+.... +.++..+.|++ .+ ++++++|.|| +.||+.|+. ..|.+.++.+++++.+ + .+..|+.+
T Consensus 6 G~~aP~f~l~~~~~G~~v~L~d-----~~-~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d 76 (167)
T 2wfc_A 6 GDKLPAVTVFGATPNDKVNMAE-----LF-AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG--VDIIACMAVN 76 (167)
T ss_dssp TCBCCCCEEESSSTTCEEEHHH-----HT-TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT--CCEEEEEESS
T ss_pred CCcCCCcEeecCCCCcEEeHHH-----Hh-CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 3445555554 45555554432 21 4567888886 999999999 9999999998887643 6 66666543
No 299
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.98 E-value=7.9e-05 Score=55.25 Aligned_cols=93 Identities=11% Similarity=0.180 Sum_probs=69.4
Q ss_pred hhhHHhh-hcC-CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCC
Q 017971 260 QDTLNLL-KDD-KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGN 337 (363)
Q Consensus 260 ~~~~~~l-~~~-~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~ 337 (363)
.+++... ... ++++++-|+ ..-....+.+...+.++++.++++.|+.+|+++++++++.||+ ...|+++++...
T Consensus 8 ~~~f~~~l~~~~~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V---~~~PT~~~~~~G 83 (105)
T 3zzx_A 8 QEDFTKQLNEAGNKLVVIDFY-ATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQI---ACMPTFLFMKNG 83 (105)
T ss_dssp HHHHHHHHHHTTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTC---CBSSEEEEEETT
T ss_pred HHHHHHHHHhcCCCEEEEEEE-CCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCC---CeecEEEEEECC
Confidence 4566653 333 345555555 4467777889999999999999999999999999999999999 679999999754
Q ss_pred CCeeEEEEEEeehhhhhHhh
Q 017971 338 ENYLTVSINVLKTRVCFFML 357 (363)
Q Consensus 338 ~~y~~~~~~~~~~~~~~~~~ 357 (363)
.......| ...+++..|+.
T Consensus 84 ~~v~~~~G-~~~~~l~~~i~ 102 (105)
T 3zzx_A 84 QKLDSLSG-ANYDKLLELVE 102 (105)
T ss_dssp EEEEEEES-CCHHHHHHHHH
T ss_pred EEEEEEeC-cCHHHHHHHHH
Confidence 44555566 35667777664
No 300
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.98 E-value=3.8e-05 Score=64.80 Aligned_cols=88 Identities=14% Similarity=0.222 Sum_probs=63.7
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
.+++++|.|| ++||++|....|.+.++.+++++. .+.+..|.++. +..+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 124 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 124 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHH
Confidence 4579999999 999999999999999999988653 37777666542 1245
Q ss_pred hhhCCcC------cCCEEEEEe-CCEEEe-ecCC----CCHHHHHHHHHhh
Q 017971 110 ASKQEID------AFPTLKIFM-HGIPTE-YYGP----RKAELLVRYLKKF 148 (363)
Q Consensus 110 ~~~~~i~------~~Pt~~~~~-~g~~~~-y~g~----~~~~~i~~~i~~~ 148 (363)
++.|++. ..|+.+++. +|+... +.|. ++.+++.+.+...
T Consensus 125 ~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 125 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 6667774 689999986 565442 3332 4677787777654
No 301
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.97 E-value=5.8e-05 Score=56.26 Aligned_cols=100 Identities=9% Similarity=0.136 Sum_probs=76.3
Q ss_pred ccC-ChhhHHhhhcC----CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC-CcEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 256 VPI-NQDTLNLLKDD----KRKIVLAIVEDETEEKSQKLVTTLKAAASANR-ELVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 256 ~~l-t~~~~~~l~~~----~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~-~~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
.++ +.+++...... ++++++.|+. ......+.+...+.+++..++ ++.|+.+|.+..+.+++.+|+ ...|
T Consensus 5 ~~i~~~~~~~~~l~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~P 80 (112)
T 1ep7_A 5 IVIDSKAAWDAQLAKGKEEHKPIVVDFTA-TWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGI---TAMP 80 (112)
T ss_dssp EEECSHHHHHHHHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTC---CBSS
T ss_pred EEecCHHHHHHHHHhhcccCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCC---Cccc
Confidence 344 34566654443 6777777764 467778888999999999998 499999999999999999999 6789
Q ss_pred eEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++++. +|+ .....+. ..+.+..|+..+|.
T Consensus 81 t~~~~~-~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 81 TFHVYK-DGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEEEE-TTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EEEEEE-CCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 998885 554 4455665 77889998887763
No 302
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.97 E-value=5.7e-05 Score=61.56 Aligned_cols=83 Identities=18% Similarity=0.191 Sum_probs=59.0
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---------------------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--------------------------------- 105 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--------------------------------- 105 (363)
..+..++.|+..+|++|+.+.|.+.++.+++.+ .+++.+...+..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~ 104 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVK-SGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFAT 104 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH-TTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhh-CCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHc
Confidence 346789999999999999999999988877621 1235555443310
Q ss_pred ---------------------------------chhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHH
Q 017971 106 ---------------------------------YSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLK 146 (363)
Q Consensus 106 ---------------------------------~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~ 146 (363)
+..+++++||.++|++++ +|+. +.|..+.+.+.+.+.
T Consensus 105 ~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~~--~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 105 QDEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEYI--FDESVTEEELRGYIE 174 (175)
T ss_dssp HHHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTEE--ECTTCCHHHHHHHHT
T ss_pred ChhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCEE--ccCCCCHHHHHHHhc
Confidence 112356679999999665 7764 468888888887764
No 303
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.97 E-value=1.5e-05 Score=58.57 Aligned_cols=60 Identities=12% Similarity=0.167 Sum_probs=46.1
Q ss_pred CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhC-----CcCcCCEEEEEeCCEEE
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQ-----EIDAFPTLKIFMHGIPT 130 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~-----~i~~~Pt~~~~~~g~~~ 130 (363)
.+.-++.|+++||++|++..+.+++.. +.+..+|.+.+++..+.+ +..++|++ |.+|+.+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~~---------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~i 78 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRKG---------VEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHI 78 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHHT---------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC---------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEE
Confidence 356677899999999999999888652 556778888877655544 88999988 4577654
No 304
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.96 E-value=5.7e-05 Score=65.07 Aligned_cols=88 Identities=13% Similarity=0.229 Sum_probs=64.3
Q ss_pred CCCeEEEEEEC-CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhh
Q 017971 59 SFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRL 109 (363)
Q Consensus 59 ~~~~~lv~fy~-~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 109 (363)
.+++++|.||+ .||+.|....|.+.++.+++++.+ +.+..|.++. +.++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~g--v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v 153 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAIN--TEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQI 153 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHH
Confidence 45899999999 999999999999999999987543 7777776652 1346
Q ss_pred hhhCCcC------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhh
Q 017971 110 ASKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 110 ~~~~~i~------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~ 148 (363)
++.|++. .+|+.+++. +|+... +.+ .+..+++.+.+...
T Consensus 154 ~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 154 SKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 7778887 689999985 555432 222 35567777766543
No 305
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.96 E-value=8.4e-05 Score=55.90 Aligned_cols=102 Identities=10% Similarity=0.182 Sum_probs=77.1
Q ss_pred cccC-ChhhHHhhhcC----CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 255 SVPI-NQDTLNLLKDD----KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 255 ~~~l-t~~~~~~l~~~----~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
+.++ +.++++..... ++++++.|+. ......+.+...+.+++++++++.|+.+|.+..+.+++.+|+ ...|
T Consensus 8 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~P 83 (118)
T 2vm1_A 8 VIACHTKQEFDTHMANGKDTGKLVIIDFTA-SWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNV---EAMP 83 (118)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSBS
T ss_pred eEEecCHHHHHHHHHhcccCCCEEEEEEEC-CCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCC---CcCc
Confidence 3444 45666654432 6777777764 467778888999999999998999999999998999999999 6799
Q ss_pred eEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++++.........+ ...+.+..++..+|+
T Consensus 84 t~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 84 TFLFIKDGEKVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp EEEEEETTEEEEEEES-CCHHHHHHHHHHHHC
T ss_pred EEEEEeCCeEEEEecC-CCHHHHHHHHHHHhc
Confidence 9999854333444555 467888888888775
No 306
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.95 E-value=2e-05 Score=68.15 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=67.0
Q ss_pred hHcCCCe-EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc---------------------------ch
Q 017971 56 AISSFDY-ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK---------------------------YS 107 (363)
Q Consensus 56 ~l~~~~~-~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~---------------------------~~ 107 (363)
.+.+++. +|+.|+++||+.|....+.+.++.+++++.+ +.+..|+++. +.
T Consensus 29 ~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~g--v~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 29 YVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLG--VDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCC--cEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 3324454 5667899999999999999999999987653 8888888753 34
Q ss_pred hhhhhCCcC-------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhh
Q 017971 108 RLASKQEID-------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 108 ~l~~~~~i~-------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~ 148 (363)
++++.|++. .+|+++++. +|+... +.| .++.++|.+.+...
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 578889987 899999985 565432 223 25778888777654
No 307
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.95 E-value=2e-05 Score=61.37 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=83.7
Q ss_pred CcccCChhhHHhhhcCCCcEEEEEEeCCC--hhhHHHHHHHHHHHHHhCCC--cEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 254 LSVPINQDTLNLLKDDKRKIVLAIVEDET--EEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
.+.++|.++++....++.++++.|..+ - ....+.+..++.++|+++.+ +.|+.||.++++++...||+ ...|
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~-~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV---~sIP 93 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSD-PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGA---FRFP 93 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCC-TTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTC---CSSS
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCC-cccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCC---ccCC
Confidence 456889999987656777887755422 2 33445788999999999975 89999999999999999999 7899
Q ss_pred eEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++|+....-....|-..++.+..++..+|.
T Consensus 94 TlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 94 ATLVFTGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 99999887777777787888888888887764
No 308
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.95 E-value=2.6e-06 Score=71.16 Aligned_cols=44 Identities=18% Similarity=0.394 Sum_probs=38.0
Q ss_pred CCeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeCccc
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
.++++|.||+.||+||+++.|.+ +++++.+.+ ++.|.+++.+.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~---~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE---GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT---TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC---CCEEEEeccCcC
Confidence 47899999999999999999999 888877643 489999998764
No 309
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.95 E-value=4.4e-05 Score=64.32 Aligned_cols=104 Identities=9% Similarity=0.093 Sum_probs=86.5
Q ss_pred CCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 253 p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
+.+..++..++......++++++.|+.+ .......+...+.++++++++ +.|+.||++..+.+++.+|+ ...|++
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a~-wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 172 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYSP-GCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGV---NSYPSL 172 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEECT-TCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeCC-CChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCC---CcCCeE
Confidence 3466788888888767778888877754 677788899999999999887 99999999999999999999 679999
Q ss_pred EEEeCCC-CeeEEEEEEeehhhhhHhhhhhc
Q 017971 332 VVWDGNE-NYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 332 vi~~~~~-~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++ .+| ......|....+.+..|+...|+
T Consensus 173 ~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 173 FIF-RSGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp EEE-CTTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred EEE-ECCCceeEecCCCCHHHHHHHHHHhCc
Confidence 999 555 46677788888999999988775
No 310
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.94 E-value=3.6e-05 Score=58.96 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=80.6
Q ss_pred CCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CcEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 253 p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
..+.+++.+++..+... ++++.|+ .......+.+...+.+++++++ ++.|+.+|.++.+.+++.+++ ...|+
T Consensus 7 ~~v~~l~~~~f~~~~~~--~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt 80 (126)
T 1x5e_A 7 GNVRVITDENWRELLEG--DWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFII---NALPT 80 (126)
T ss_dssp CSEEECCTTTHHHHTSS--EEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred CccEEecHHHHHHHhCC--CEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCC---cccCE
Confidence 34667888888876543 3554444 5577788888999999998876 499999999999999999999 67999
Q ss_pred EEEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 331 MVVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 331 ~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
++++ .+|+.....+....+.+..|+...+
T Consensus 81 ~~~~-~~G~~~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 81 IYHC-KDGEFRRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp EEEE-ETTEEEECCSCCCHHHHHHHHHTCG
T ss_pred EEEE-eCCeEEEeecCCCHHHHHHHHHHHh
Confidence 9999 5677667777788888999988766
No 311
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.93 E-value=5.2e-05 Score=57.09 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=74.2
Q ss_pred cccCCh-hhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 255 SVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 255 ~~~lt~-~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
+.+++. +.+..+...++++++.|+ .......+.+...+.+++++++++.|+.+|.++.+.+++.+++ ...|++++
T Consensus 14 ~~~~~~~~~~~~~~~~~k~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~ 89 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIKQNDKLVIDFY-ATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEV---TAMPTFVL 89 (114)
T ss_dssp SCBCCSHHHHHHHHHHCSEEEEEEE-CTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSBSEEEE
T ss_pred eeecCCHHHHHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCC---CcccEEEE
Confidence 444443 566666666777777776 4467778888899999999998899999999998999999999 67999998
Q ss_pred EeCCCC-eeEEEEEEeehhhhhHhhh
Q 017971 334 WDGNEN-YLTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 334 ~~~~~~-y~~~~~~~~~~~~~~~~~~ 358 (363)
+. +|+ .....+.. .+++..++..
T Consensus 90 ~~-~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 90 GK-DGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EE-TTEEEEEEESSC-HHHHHHHHHT
T ss_pred Ee-CCeEEEEEeCCC-HHHHHHHHHh
Confidence 84 554 44556655 7777777654
No 312
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.93 E-value=6.3e-05 Score=56.15 Aligned_cols=100 Identities=16% Similarity=0.240 Sum_probs=72.3
Q ss_pred ccCCh-hhHHhhhcC---CCcEEEEEEeCCChhhHHHHHHHHHHHHHh--CCCcEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 256 VPINQ-DTLNLLKDD---KRKIVLAIVEDETEEKSQKLVTTLKAAASA--NRELVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 256 ~~lt~-~~~~~l~~~---~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~--~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
.+++. +++...... ++++++.|+. ......+.+...+.+++++ ++++.|+.+|.+..+.+++.+|+ ...|
T Consensus 3 ~~i~~~~~~~~~~~~~~~~~~~~v~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~P 78 (112)
T 3d6i_A 3 IEINDQEQFTYLTTTAAGDKLIVLYFHT-SWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEI---SAVP 78 (112)
T ss_dssp EEECCHHHHHHHHTTTTTTCCEEEEEEC-CC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred cccCCHHHHHHHHhcccCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCC---Cccc
Confidence 34554 677765543 6777777764 4667778888999999998 55699999999999999999999 6799
Q ss_pred eEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++++ +|+ .....|. ...++..++..+|.
T Consensus 79 t~~~~~-~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 79 YFIIIH-KGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEEEE-TTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEEEEE-CCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 999995 554 3444554 34457887776653
No 313
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.92 E-value=4.2e-05 Score=58.22 Aligned_cols=102 Identities=10% Similarity=0.108 Sum_probs=78.7
Q ss_pred CcccCCh-hhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 254 LSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 254 ~~~~lt~-~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
.+..++. +++......++++++.|+. ........+...+.++++.+++ +.|+.+|.+..+.+++.+|+ ...|+
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a-~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v---~~~Pt 91 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWA-TWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGI---RAMPT 91 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEEC-TTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTC---CSSSE
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEEC-CCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCC---CcccE
Confidence 3445554 7777766777788777774 4566777888899999988876 99999999999999999999 67999
Q ss_pred EEEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 331 MVVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 331 ~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+++++.........+. ..+.+..|+..+|
T Consensus 92 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 92 FVFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9999643334555665 7788888888766
No 314
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.91 E-value=2.5e-05 Score=64.91 Aligned_cols=41 Identities=17% Similarity=0.389 Sum_probs=32.8
Q ss_pred CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA 103 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~ 103 (363)
.++.++.|+++||++|..+.|.+.++.+.+.. ++.+-.+..
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 62 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS---DAYLRTEHV 62 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT---TEEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCCC---ceEEEEecc
Confidence 47889999999999999999999998876533 366655543
No 315
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.91 E-value=6.8e-05 Score=55.93 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=74.1
Q ss_pred ChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEE
Q 017971 259 NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (363)
Q Consensus 259 t~~~~~~l~~----~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~ 334 (363)
+.+++..... .++++++.|+. ......+.+...+.++++.++++.|+.+|.++.+.+++.+|+ ...|+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~ 86 (113)
T 1ti3_A 11 TVDTWKEHFEKGKGSQKLIVVDFTA-SWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNV---EAMPTFIFL 86 (113)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEEC-SSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHC---SSTTEEEEE
T ss_pred cHHHHHHHHHHhhhcCCeEEEEEEC-CCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCC---CcccEEEEE
Confidence 4455555333 35666666664 467778888999999999998899999999999999999999 678999999
Q ss_pred eCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 335 DGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 335 ~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+ +|+ .....+ ...+.+..++..+|.
T Consensus 87 ~-~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 87 K-DGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp E-TTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred e-CCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 5 454 444555 577888888888764
No 316
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.90 E-value=1.6e-05 Score=59.99 Aligned_cols=103 Identities=8% Similarity=0.113 Sum_probs=81.0
Q ss_pred cccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC----CcEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----ELVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~----~~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
+.+++.+++......++++++.|+.+ .....+.+...+.++++.++ ++.|+.+|+.+.+.+++.+|+ ...|+
T Consensus 9 v~~l~~~~~~~~~~~~~~~lv~f~~~-~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt 84 (120)
T 1mek_A 9 VLVLRKSNFAEALAAHKYLLVEFYAP-WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV---RGYPT 84 (120)
T ss_dssp EEECCTTTHHHHHHHCSEEEEEEECS-SCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTC---CSSSE
T ss_pred cEEechhhHHHHHccCCeEEEEEECC-CCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCC---CcccE
Confidence 56788888888777777777777644 56666677788888888765 399999999988899999999 67999
Q ss_pred EEEEeCCCCe--eEEEEEEeehhhhhHhhhhhc
Q 017971 331 MVVWDGNENY--LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 331 ~vi~~~~~~y--~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++...+.. ....+....+.+..|+...|.
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 9999644433 677788888899999988775
No 317
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.88 E-value=0.00014 Score=55.59 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=73.4
Q ss_pred ChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEE
Q 017971 259 NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (363)
Q Consensus 259 t~~~~~~l~~----~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~ 334 (363)
+.+++..... .++++++.|+. ......+.+...+.+++++++++.|+.+|.++.+.+++.+|+ ...|+++++
T Consensus 23 ~~~~~~~~l~~~~~~~k~vvv~f~a-~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt~~~~ 98 (124)
T 1xfl_A 23 TVETWNEQLQKANESKTLVVVDFTA-SWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAI---QAMPTFMFL 98 (124)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTC---CSSSEEEEE
T ss_pred CHHHHHHHHHHhhhcCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCC---CccCEEEEE
Confidence 4455554332 35667666664 567778888999999999998899999999998999999999 679999988
Q ss_pred eCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 335 DGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 335 ~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
. +|+ .....+ ...+.+..++..+|+
T Consensus 99 ~-~G~~~~~~~G-~~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 99 K-EGKILDKVVG-AKKDELQSTIAKHLA 124 (124)
T ss_dssp E-TTEEEEEEES-CCHHHHHHHHHHHCC
T ss_pred E-CCEEEEEEeC-CCHHHHHHHHHHhcC
Confidence 4 554 344455 467788888887764
No 318
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.87 E-value=9.5e-05 Score=55.15 Aligned_cols=99 Identities=5% Similarity=0.020 Sum_probs=75.8
Q ss_pred ccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEe
Q 017971 256 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (363)
Q Consensus 256 ~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~ 335 (363)
..++.+++ .....+++.++.|+ .......+.+...+.+++..++++.|+.+|.+..+.+++.+|+ ...|+++++
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~- 79 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGF---ERVPTLVFI- 79 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTC---CSSCEEEEE-
T ss_pred ecCCHHHH-HHHHcCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCC---cccCEEEEE-
Confidence 45666777 44445567766665 4467777888999999999988899999999988999999999 679999999
Q ss_pred CCC-CeeEEEEEEeehhhhhHhhhhh
Q 017971 336 GNE-NYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 336 ~~~-~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
.+| ......|....+++..++...+
T Consensus 80 ~~G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 80 RDGKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp ESSSEEEEEESCCCHHHHHHHHHTC-
T ss_pred ECCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 455 4556667777888888877654
No 319
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.86 E-value=1.8e-05 Score=62.27 Aligned_cols=104 Identities=11% Similarity=0.087 Sum_probs=69.8
Q ss_pred CcccCChhhHHhhhcCCCcEEEEEEeCC-ChhhHHHHHHHHHHHHHhCCCcE--EEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 254 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELV--FCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~a~~~~~~~--f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
.+..++.++++.....+...+++|..+- .....+.+...+.+++++++++. |+.||.++.+.+++.||+ ...|+
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V---~~iPT 94 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNV---RRFPA 94 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTC---CSSSE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCC---CcCCe
Confidence 5677888888886665556655553221 13445677888999999984488 999999999999999999 68999
Q ss_pred EEEEeCCC-CeeEEEEEEeehhhhhHhhhhhc
Q 017971 331 MVVWDGNE-NYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 331 ~vi~~~~~-~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++++ .+| ......|....+.+..++..+|+
T Consensus 95 ~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 95 TLVF-TDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp EEEE-SCC----CEESCCCHHHHHHHHHHHHC
T ss_pred EEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9999 455 45567777778889999988875
No 320
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.84 E-value=4.7e-05 Score=58.55 Aligned_cols=103 Identities=12% Similarity=0.122 Sum_probs=77.4
Q ss_pred CCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 252 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
.|.+...+.+.+......++++++.|+. ......+.+...+.++++++++ +.|+.+|.+..+.+++.+|+ ...|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a-~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt 99 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFA-KWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSV---KSLPT 99 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTC---CSSSE
T ss_pred CCccccCCccHHHHHHccCCEEEEEEEC-CCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CCcCE
Confidence 3444444455555555667777777764 4677788889999999998875 99999999999999999999 67999
Q ss_pred EEEEeCCCCeeEEEEEEeehhhhhHhhh
Q 017971 331 MVVWDGNENYLTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 331 ~vi~~~~~~y~~~~~~~~~~~~~~~~~~ 358 (363)
+++++..+......+....+.+..|+.+
T Consensus 100 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 100 IILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 9999544445667777788888887754
No 321
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.84 E-value=3.3e-05 Score=54.23 Aligned_cols=67 Identities=12% Similarity=0.183 Sum_probs=47.5
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCcCcCCEEEEEeCCEEEeecCCCCHH
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPTLKIFMHGIPTEYYGPRKAE 139 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~ 139 (363)
++.|+++||++|++..+.+.+. + +.+..+|.+.++. +.+.+++.++|+++ .+|+.+. | .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~----i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i~--g---~~ 66 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-----G----VSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHIG--G---YD 66 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----T----CCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEEE--S---HH
T ss_pred EEEEECCCChhHHHHHHHHHHC-----C----CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEEe--C---HH
Confidence 5779999999999998888764 1 5566777776543 56678999999984 4776542 2 34
Q ss_pred HHHHHHH
Q 017971 140 LLVRYLK 146 (363)
Q Consensus 140 ~i~~~i~ 146 (363)
.|.+++.
T Consensus 67 ~i~~~~~ 73 (82)
T 1fov_A 67 DLYALDA 73 (82)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5655554
No 322
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.84 E-value=4.5e-05 Score=61.55 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=48.2
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
+...|+....+.++..+.|++- .+++++|.|| +.||++|....|.+.++.+++ . ++.+..|.++..
T Consensus 20 G~~~P~f~l~~~~G~~v~l~~~-------~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~---~v~vv~Is~d~~ 86 (165)
T 1q98_A 20 GEIVENFILVGNDLADVALNDF-------ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S---NTIVLCISADLP 86 (165)
T ss_dssp TCBCCCCEEECTTSCEEEGGGG-------TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T---TEEEEEEESSCH
T ss_pred CCCCCCeEEECCCCCEEehHHh-------CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CCEEEEEeCCCH
Confidence 3445555555556666665432 4579999999 899999999999999998877 2 388888887543
No 323
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.80 E-value=5.3e-05 Score=57.39 Aligned_cols=103 Identities=12% Similarity=0.132 Sum_probs=81.2
Q ss_pred CCcccCChhhHHhh-hcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC------CcEEEEEeccCchhHHhhcCCCCC
Q 017971 253 PLSVPINQDTLNLL-KDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR------ELVFCYVGIKQFADFADTFEANKK 325 (363)
Q Consensus 253 p~~~~lt~~~~~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~------~~~f~~vd~~~~~~~~~~~gi~~~ 325 (363)
+.+.+++.+++... ...++++++.|+.+ .....+.+...+.+++++++ ++.|+.+|++..+ +++ ++
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v--- 79 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAP-WCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EI--- 79 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECS-SCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CC---
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECC-CCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--cc---
Confidence 34677888888876 35667787777754 66777888889999998875 4999999998754 444 77
Q ss_pred CCCCeEEEEeCCCC--eeEEEEEEeehhhhhHhhhhhcC
Q 017971 326 SKLPKMVVWDGNEN--YLTVSINVLKTRVCFFMLTLLQF 362 (363)
Q Consensus 326 ~~~P~~vi~~~~~~--y~~~~~~~~~~~~~~~~~~~~~~ 362 (363)
...|++++++.+|+ .....+....+.+..|+...+.+
T Consensus 80 ~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 80 QGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 67899999998876 67778888889999999988865
No 324
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.80 E-value=5.6e-05 Score=55.83 Aligned_cols=72 Identities=17% Similarity=0.121 Sum_probs=48.6
Q ss_pred CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc-----hhhh----hhCCcCcCCEEEEEeCCEEEe
Q 017971 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY-----SRLA----SKQEIDAFPTLKIFMHGIPTE 131 (363)
Q Consensus 61 ~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~-----~~l~----~~~~i~~~Pt~~~~~~g~~~~ 131 (363)
+..++.|+++||++|++..+.+++.. +.+-.+|.+.. +++. +..+..++|++++ .+|+
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~---------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~~--- 87 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG---------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDEK--- 87 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT---------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTTE---
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC---------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCCE---
Confidence 45577799999999999999888653 34455666541 2332 3468999999876 2223
Q ss_pred ecCCCCHHHHHHHH
Q 017971 132 YYGPRKAELLVRYL 145 (363)
Q Consensus 132 y~g~~~~~~i~~~i 145 (363)
+-|..+.+.|.+++
T Consensus 88 ~igg~~~~~l~~~L 101 (103)
T 3nzn_A 88 AIVGFKEKEIRESL 101 (103)
T ss_dssp EEESCCHHHHHHHT
T ss_pred EEEcCCHHHHHHHh
Confidence 34566777777664
No 325
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.80 E-value=2.9e-05 Score=59.42 Aligned_cols=102 Identities=14% Similarity=0.175 Sum_probs=73.6
Q ss_pred cccCChhhHHh-hhcCCCcEEEEEEeCCChh--------------hHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHh
Q 017971 255 SVPINQDTLNL-LKDDKRKIVLAIVEDETEE--------------KSQKLVTTLKAAASANRE-LVFCYVGIKQFADFAD 318 (363)
Q Consensus 255 ~~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~--------------~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~ 318 (363)
+.+++.+++.. +...++++++.|+.+ ... ..+.+...+.++++++++ +.|+.+|.++.+.+++
T Consensus 5 v~~l~~~~f~~~~~~~~k~vlv~F~a~-wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~ 83 (123)
T 1oaz_A 5 IIHLTDDSFDTDVLKADGAILVDFWAE-WCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 83 (123)
T ss_dssp CEECCSTTHHHHTTSCSSEEEEEEECS-SCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGG
T ss_pred cEecChhhHHHHHHhCCCeEEEEEECC-CCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHH
Confidence 56778888874 456677777777654 344 455566677788888875 9999999999999999
Q ss_pred hcCCCCCCCCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 319 TFEANKKSKLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 319 ~~gi~~~~~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.+|+ ...|+++++ .+|+ .....|....+.+..|+...|.
T Consensus 84 ~~~v---~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 84 KYGI---RGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp GGTC---CBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred HcCC---CccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 9999 679999999 5664 4567777778889999887763
No 326
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.78 E-value=3.8e-05 Score=55.37 Aligned_cols=57 Identities=18% Similarity=0.401 Sum_probs=42.7
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCcCcCCEEEEEeCCEEE
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPTLKIFMHGIPT 130 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~~Pt~~~~~~g~~~ 130 (363)
.++.|+++||++|++..+.+++. + +.+..+|.++++. +.+.+++.++|++ |.+|+.+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~--i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i 67 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------G--AEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHV 67 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------C--CCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 47789999999999998887753 1 5677788877654 4457899999976 4577644
No 327
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.77 E-value=0.00013 Score=59.30 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=72.2
Q ss_pred HHHHHHhhcCCCcccCChhhHHhhhcCC--CcEEEEEEeC------CChhhHHHHHHHHHHHHHhCC-----C-cEEEEE
Q 017971 243 LEEFIKQNFLPLSVPINQDTLNLLKDDK--RKIVLAIVED------ETEEKSQKLVTTLKAAASANR-----E-LVFCYV 308 (363)
Q Consensus 243 l~~fi~~~~~p~~~~lt~~~~~~l~~~~--~~~~i~~~~~------~~~~~~~~~~~~l~~~a~~~~-----~-~~f~~v 308 (363)
+.++.....-..+.++|..+++.+...+ .++++.|... .-....+.+...+.++|+++. + +.|+.|
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 3445555555668899999999875443 3466666541 245567899999999998875 5 999999
Q ss_pred eccCchhHHhhcCCCCCCCCCeEEEEeCCC
Q 017971 309 GIKQFADFADTFEANKKSKLPKMVVWDGNE 338 (363)
Q Consensus 309 d~~~~~~~~~~~gi~~~~~~P~~vi~~~~~ 338 (363)
|.++++++.+.||| ...|+++++.+.+
T Consensus 88 D~d~~~~la~~~~I---~siPtl~~F~~g~ 114 (178)
T 3ga4_A 88 DVNEVPQLVKDLKL---QNVPHLVVYPPAE 114 (178)
T ss_dssp ETTTCHHHHHHTTC---CSSCEEEEECCCC
T ss_pred ECccCHHHHHHcCC---CCCCEEEEEcCCC
Confidence 99999999999999 7899999999875
No 328
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.77 E-value=0.00013 Score=51.88 Aligned_cols=74 Identities=11% Similarity=0.029 Sum_probs=51.4
Q ss_pred eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc----hhhhhhCCc-----CcCCEEEEEeCCEEEee
Q 017971 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----SRLASKQEI-----DAFPTLKIFMHGIPTEY 132 (363)
Q Consensus 62 ~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~----~~l~~~~~i-----~~~Pt~~~~~~g~~~~y 132 (363)
..++.|+++||++|++..+.+.+.. -++.+..+|..++ .++.+.++. .++|++++ +|+.+.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~-------i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i~- 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN-------IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHIG- 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT-------CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEEE-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC-------CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEEe-
Confidence 3477899999999999888776532 2355556666554 457777888 99999964 776553
Q ss_pred cCCCCHHHHHHHHHhhc
Q 017971 133 YGPRKAELLVRYLKKFV 149 (363)
Q Consensus 133 ~g~~~~~~i~~~i~~~~ 149 (363)
..+++.++..+..
T Consensus 74 ----g~~~i~~~~~~~~ 86 (89)
T 3msz_A 74 ----GFTELKANADKIL 86 (89)
T ss_dssp ----SHHHHHHTHHHHT
T ss_pred ----ChHHHHHHHHHHh
Confidence 3566777666554
No 329
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.74 E-value=6.8e-05 Score=57.89 Aligned_cols=106 Identities=8% Similarity=0.066 Sum_probs=80.6
Q ss_pred CCCcccCChhhHHhhhc-CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CcEEEEEeccCchhHHhhcCCCCCCC
Q 017971 252 LPLSVPINQDTLNLLKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQFADFADTFEANKKSK 327 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~~~~~~~~~gi~~~~~ 327 (363)
.+.+.+++.+++..... .++++++.|+ .......+.+...+.+++++++ ++.|+.+|++..+.+++.|++ ..
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKV---EG 81 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCC---SS
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCC---Cc
Confidence 34577788888887554 3566666655 4467777888899999998875 399999999988888888998 67
Q ss_pred CCeEEEEeCCCC--eeEEE-EEEeehhhhhHhhhhhc
Q 017971 328 LPKMVVWDGNEN--YLTVS-INVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 328 ~P~~vi~~~~~~--y~~~~-~~~~~~~~~~~~~~~~~ 361 (363)
.|++++++.+++ ..... +....+.+..|+...|.
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp SSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred CCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 999999988753 22334 55778889999888764
No 330
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.74 E-value=0.00011 Score=60.20 Aligned_cols=33 Identities=21% Similarity=0.592 Sum_probs=28.2
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhc
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAK 91 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~ 91 (363)
..++.+|+|++-.|+||++++|.+.++.+.+.+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~ 52 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE 52 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC
Confidence 346899999999999999999999998876543
No 331
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.74 E-value=0.00021 Score=59.09 Aligned_cols=41 Identities=22% Similarity=0.324 Sum_probs=32.4
Q ss_pred CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeC
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA 103 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~ 103 (363)
.+..++.|++++|++|..+.|.+.++.+.+.+ ++.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK---DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC---ceEEEEeCc
Confidence 45789999999999999999999988876532 466655543
No 332
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.73 E-value=0.00012 Score=63.57 Aligned_cols=87 Identities=13% Similarity=0.202 Sum_probs=61.9
Q ss_pred CCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc----------------------------hhh
Q 017971 59 SFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY----------------------------SRL 109 (363)
Q Consensus 59 ~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~----------------------------~~l 109 (363)
.+++++|.|| +.||+.|....|.+.++.+++++.+ +.+..|.++.. ..+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~g--v~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~v 167 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 167 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHH
Confidence 4578999999 9999999999999999999987543 77777766522 246
Q ss_pred hhhCCcC------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHh
Q 017971 110 ASKQEID------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKK 147 (363)
Q Consensus 110 ~~~~~i~------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~ 147 (363)
++.|++. .+|+.+++. +|+... +.+ .+..+++.+.+..
T Consensus 168 a~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 6667775 579888886 454432 222 4556676666543
No 333
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.72 E-value=8.4e-05 Score=62.08 Aligned_cols=66 Identities=15% Similarity=0.145 Sum_probs=48.8
Q ss_pred CCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 017971 30 GLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 30 ~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
|..+|+....+.++..+.|++- ++++++|.|| +.||+.|....|.+.++.+++ . ++.+..|.++..
T Consensus 55 G~~aPdf~l~d~~G~~v~L~d~-------~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~---~v~vv~Is~D~~ 121 (200)
T 3zrd_A 55 GDKAKDFTLVAKDLSDVALSSF-------AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E---NTVVLCISSDLP 121 (200)
T ss_dssp TCBCCCCEEECTTSCEEEGGGG-------TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T---TEEEEEEESSCH
T ss_pred CCCCCCeEEECCCCCEEcHHHh-------CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C---CCEEEEEECCCH
Confidence 4445555555666666666542 4689999999 689999999999999999877 2 388888877643
No 334
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.72 E-value=7.1e-05 Score=56.43 Aligned_cols=68 Identities=13% Similarity=0.259 Sum_probs=47.6
Q ss_pred hhhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc--c-----hhhhhhCCcCcCCEEE
Q 017971 50 ESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK--Y-----SRLASKQEIDAFPTLK 122 (363)
Q Consensus 50 ~~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~--~-----~~l~~~~~i~~~Pt~~ 122 (363)
.+.+++.++.++ ++.|+.+||++|++..+.+.+.. +.+-.+|.+. + ..+.+..|..++|+++
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~---------i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vf 75 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSLG---------VECNVLELDQVDDGARVQEVLSEITNQKTVPNIF 75 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTT---------CCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHcC---------CCcEEEEecCCCChHHHHHHHHHHhCCCccCEEE
Confidence 356777776655 34499999999999988887631 4456667664 2 2355667889999986
Q ss_pred EEeCCEEE
Q 017971 123 IFMHGIPT 130 (363)
Q Consensus 123 ~~~~g~~~ 130 (363)
+ +|+.+
T Consensus 76 i--~g~~i 81 (114)
T 3h8q_A 76 V--NKVHV 81 (114)
T ss_dssp E--TTEEE
T ss_pred E--CCEEE
Confidence 5 77655
No 335
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.71 E-value=0.00021 Score=55.58 Aligned_cols=97 Identities=10% Similarity=0.165 Sum_probs=73.9
Q ss_pred ChhhHHhhh----cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEE
Q 017971 259 NQDTLNLLK----DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 334 (363)
Q Consensus 259 t~~~~~~l~----~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~ 334 (363)
+.+++.... ..++++++.|+. ......+.+...+.+++++++++.|+.+|.++.+.+++.+|+ ...|+++++
T Consensus 31 ~~~~~~~~~~~~~~~~k~vvv~f~a-~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~ 106 (139)
T 3d22_A 31 TKERWDQKLSEASRDGKIVLANFSA-RWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEI---KATPTFFFL 106 (139)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CEESEEEEE
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCC---CcccEEEEE
Confidence 345555433 245677777765 467777888999999999998899999999999999999999 678999998
Q ss_pred eCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 335 DGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 335 ~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.+|+ .....+. ..+.+..++..+|+
T Consensus 107 -~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 107 -RDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp -ETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred -cCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 5554 4444554 66788888887764
No 336
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.70 E-value=8.1e-05 Score=53.64 Aligned_cols=75 Identities=25% Similarity=0.377 Sum_probs=54.3
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhC-----CcCcCCEEEEEeCCEEEeecCCCC
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQ-----EIDAFPTLKIFMHGIPTEYYGPRK 137 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~-----~i~~~Pt~~~~~~g~~~~y~g~~~ 137 (363)
.++.|..+||++|++....+++. .+.|-.+|.+++++..+.+ |.+++|++++ .+|.... ..+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~---------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~l~---~~~ 71 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN---------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGSTLT---NPS 71 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCEEE---SCC
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc---------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEEEe---CCC
Confidence 47789999999999987776541 2778889998887654443 6788999864 5565432 346
Q ss_pred HHHHHHHHHhhcC
Q 017971 138 AELLVRYLKKFVA 150 (363)
Q Consensus 138 ~~~i~~~i~~~~~ 150 (363)
.++|.+++.+..+
T Consensus 72 ~~el~~~L~el~g 84 (92)
T 2lqo_A 72 ADEVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 7888888877654
No 337
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.68 E-value=0.00037 Score=52.62 Aligned_cols=79 Identities=19% Similarity=0.282 Sum_probs=63.2
Q ss_pred CcccC--ChhhHH-hhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 254 LSVPI--NQDTLN-LLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 254 ~~~~l--t~~~~~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
.+..+ +..++. .+...++++++.|+. ......+.+...+.+++.+++++.|+.+|.+..+.+++.+++ ...|+
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a-~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i---~~~Pt 79 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFA-TWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGV---SSIPA 79 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCC---CCCCE
Confidence 34455 456676 455566777777764 467778888999999999996699999999999999999999 67999
Q ss_pred EEEEeC
Q 017971 331 MVVWDG 336 (363)
Q Consensus 331 ~vi~~~ 336 (363)
+++++.
T Consensus 80 ~~~~~~ 85 (118)
T 2f51_A 80 LFFVKK 85 (118)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 999987
No 338
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.68 E-value=0.00011 Score=64.99 Aligned_cols=105 Identities=10% Similarity=0.149 Sum_probs=83.0
Q ss_pred CCCcccCChhhHHhhhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCC
Q 017971 252 LPLSVPINQDTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 328 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~~--~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~ 328 (363)
.+.+.++|.++++.+... ++++++.|+.+ -....+.+...+.++++++++ +.|+.||+++.+.+++.||+ ...
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~ 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSE-RSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGL---RAI 81 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECT-TCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTC---CSS
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECC-CChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCC---CCC
Confidence 456788999999886543 67787777754 555666778888999999887 99999999999999999999 689
Q ss_pred CeEEEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 329 PKMVVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 329 P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
|+++++..........+....+.+..++...+
T Consensus 82 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 82 PTVYLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred CeEEEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 99999954334455677777888888887765
No 339
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.61 E-value=0.0001 Score=60.72 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=32.6
Q ss_pred CCe-EEEEEECCCChhhhh-HHHHHHHHHHHhhcCCCCeE-EEEEeCc
Q 017971 60 FDY-ILVDFYAPWCGHCKR-LAPQLDEAAPILAKLKEPIV-IAKVDAD 104 (363)
Q Consensus 60 ~~~-~lv~fy~~~C~~C~~-~~~~~~~~a~~~~~~~~~v~-~~~vd~~ 104 (363)
+++ +|+.||+.||+.|+. ..|.+.++++++++.+ +. +..|+.+
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d 101 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG--VDDIAVVAVN 101 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESS
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC--CCEEEEEECC
Confidence 454 455566999999999 7999999999987654 55 6666654
No 340
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.61 E-value=0.00054 Score=51.86 Aligned_cols=100 Identities=9% Similarity=0.067 Sum_probs=72.1
Q ss_pred CCCcccCChhhHHh-hhcCCC--cEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCC
Q 017971 252 LPLSVPINQDTLNL-LKDDKR--KIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 328 (363)
Q Consensus 252 ~p~~~~lt~~~~~~-l~~~~~--~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~ 328 (363)
+..+.++|.+++.. +...+. ++++.|+ .......+.+...+.++|++++++.|+.+|.++. ...+++ ...
T Consensus 2 ~G~v~~it~~~f~~~v~~~~~~~~vvv~F~-a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~---~~~~~v---~~~ 74 (118)
T 3evi_A 2 FGELREISGNQYVNEVTNAEEDVWVIIHLY-RSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC---IQHYHD---NCL 74 (118)
T ss_dssp CCSCEECCGGGHHHHTTTCCTTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT---STTCCG---GGC
T ss_pred CcceEEeCHHHHHHHHHhcCCCCeEEEEEe-CCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh---HHHCCC---CCC
Confidence 45677888888886 433333 5666665 4567778899999999999999999999999874 477888 679
Q ss_pred CeEEEEeCCCCeeEEEE-------EEeehhhhhHhhh
Q 017971 329 PKMVVWDGNENYLTVSI-------NVLKTRVCFFMLT 358 (363)
Q Consensus 329 P~~vi~~~~~~y~~~~~-------~~~~~~~~~~~~~ 358 (363)
|++++++.........+ +.+.+.++.++.+
T Consensus 75 PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 75 PTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp SEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 99999987644433333 3455666666543
No 341
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.61 E-value=0.00018 Score=58.56 Aligned_cols=56 Identities=9% Similarity=0.067 Sum_probs=36.0
Q ss_pred CCCeEEEEE-ECCCChhhh-hHHHHHHHHHHHhhcCCCCeEEEE-EeCcc---chhhhhhCCcC
Q 017971 59 SFDYILVDF-YAPWCGHCK-RLAPQLDEAAPILAKLKEPIVIAK-VDADK---YSRLASKQEID 116 (363)
Q Consensus 59 ~~~~~lv~f-y~~~C~~C~-~~~~~~~~~a~~~~~~~~~v~~~~-vd~~~---~~~l~~~~~i~ 116 (363)
++++++|.| ++.||+.|. ...|.+.++++++++.+ +.+.. +..+. ....++++++.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g--v~vv~~iS~D~~~~~~~f~~~~~~~ 103 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG--VQVVACLSVNDAFVTGEWGRAHKAE 103 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CEEEEEEcCCCHHHHHHHHHHhCCC
Confidence 345555554 599999999 58899999999987654 44432 55443 12344444443
No 342
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.76 E-value=8.9e-06 Score=59.94 Aligned_cols=100 Identities=7% Similarity=0.100 Sum_probs=74.8
Q ss_pred ccCChhhHHh-hhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEE
Q 017971 256 VPINQDTLNL-LKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 256 ~~lt~~~~~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi 333 (363)
.+++.+++.. +...++++++.|+ .......+.+...+++++.++++ +.|+.+|.+..+.+++.+|+ ...|++++
T Consensus 4 ~~l~~~~~~~~~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 79 (106)
T 2yj7_A 4 IEVTDENFEQEVLKSDKPVLVDFW-APWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGI---RSIPTLLL 79 (106)
Confidence 4566666664 3455667766665 44566677888888999988885 99999999988899999999 57899999
Q ss_pred EeCCC-CeeEEEEEEeehhhhhHhhhhh
Q 017971 334 WDGNE-NYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 334 ~~~~~-~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
+ .+| ......+....+.+..++..+|
T Consensus 80 ~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 80 F-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 9 454 4555667777778888776654
No 343
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.60 E-value=0.00081 Score=54.77 Aligned_cols=88 Identities=17% Similarity=0.135 Sum_probs=65.2
Q ss_pred cCCCeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeCccch---------------hhhhh---CCcC
Q 017971 58 SSFDYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADKYS---------------RLASK---QEID 116 (363)
Q Consensus 58 ~~~~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~~~~~---------------~l~~~---~~i~ 116 (363)
++.++.+|+++++||..|..+.... +.+.+-++. ++.+...|.+... .++.. +++.
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~---nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~ 129 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ---NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTD 129 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH---TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCST
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc---CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCC
Confidence 3468999999999999999987553 234555554 3888888887654 34443 8999
Q ss_pred cCCEEEEEeC--C--EEE-eecCCCCHHHHHHHHHhh
Q 017971 117 AFPTLKIFMH--G--IPT-EYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 117 ~~Pt~~~~~~--g--~~~-~y~g~~~~~~i~~~i~~~ 148 (363)
++|++.+... + +.+ ...|..+++++.+-++..
T Consensus 130 ~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 130 QFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp TCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 9999999952 2 233 478999999988877654
No 344
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.58 E-value=8.2e-05 Score=60.49 Aligned_cols=59 Identities=12% Similarity=0.193 Sum_probs=42.5
Q ss_pred CCCeEEEEEECCCChhhhhH-HHHHHHHHHHhhcCCCCeE-EEEEeCcc---chhhhhhCCcC-cCC
Q 017971 59 SFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIV-IAKVDADK---YSRLASKQEID-AFP 119 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~-~~~~~~~a~~~~~~~~~v~-~~~vd~~~---~~~l~~~~~i~-~~P 119 (363)
..+.+|+.||+.||+.|+.. .|.+.++.+++++.+ +. +..|+.+. ....++++++. .+|
T Consensus 43 gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g--~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 43 DKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG--VDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp TSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT--CSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 33477788999999999998 999999998887654 55 66676653 23345566653 555
No 345
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.57 E-value=0.00034 Score=54.25 Aligned_cols=100 Identities=9% Similarity=-0.029 Sum_probs=79.0
Q ss_pred cccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEec---------cCchhHHhhcCCCCC
Q 017971 255 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI---------KQFADFADTFEANKK 325 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~---------~~~~~~~~~~gi~~~ 325 (363)
+.+++.+++...... ++++.|+.+ -....+.+...+.+++++++ +.|+.+|. +.++.+++.+|+
T Consensus 18 v~~l~~~~~~~~~~~--~vlv~F~a~-wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v--- 90 (135)
T 3emx_A 18 LIYITPEEFRQLLQG--DAILAVYSK-TCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGV--- 90 (135)
T ss_dssp EEECCHHHHHHHHTS--SEEEEEEET-TCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTC---
T ss_pred eeecCHHHHHHHhCC--cEEEEEECC-cCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCC---
Confidence 456777777776554 777777644 67778888999999999888 99999999 778889999999
Q ss_pred CCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 326 SKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 326 ~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|++++++.........|....+.+..++..++.
T Consensus 91 ~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 91 EGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYG 126 (135)
T ss_dssp CSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred ceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 679999999944456677788888888888877664
No 346
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.56 E-value=0.00042 Score=59.22 Aligned_cols=86 Identities=9% Similarity=-0.006 Sum_probs=60.8
Q ss_pred CeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-----------------------------chhhh
Q 017971 61 DYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-----------------------------YSRLA 110 (363)
Q Consensus 61 ~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-----------------------------~~~l~ 110 (363)
+.++|.|| ++||+.|....+.+.++.+++++.+ +.+..|.++. +.+++
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~--v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va 107 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRG--VKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA 107 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcC--CEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH
Confidence 47888888 8999999999999999998887643 6666666542 12456
Q ss_pred hhCCcC------------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhh
Q 017971 111 SKQEID------------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 111 ~~~~i~------------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~ 148 (363)
+.|++. ..|+.+++. +|+... +.| .++.++|.+.+...
T Consensus 108 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 108 VKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 667764 478888886 454332 222 36778888877654
No 347
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.55 E-value=0.00084 Score=57.00 Aligned_cols=85 Identities=15% Similarity=0.108 Sum_probs=59.9
Q ss_pred eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc-------------------------------chhhh
Q 017971 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-------------------------------YSRLA 110 (363)
Q Consensus 62 ~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-------------------------------~~~l~ 110 (363)
.+|+.|+++||+.|....+.+.++.+++++.+ +.+..|.++. +.+++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va 111 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRN--VKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA 111 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH
Confidence 45666789999999999999999999887543 6676666542 23466
Q ss_pred hhCCcC------------cCCEEEEEe-CCEEEe-ecC----CCCHHHHHHHHHhh
Q 017971 111 SKQEID------------AFPTLKIFM-HGIPTE-YYG----PRKAELLVRYLKKF 148 (363)
Q Consensus 111 ~~~~i~------------~~Pt~~~~~-~g~~~~-y~g----~~~~~~i~~~i~~~ 148 (363)
+.|++. ..|+.+++. +|+... +.| .++.++|.+.+...
T Consensus 112 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 112 ILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp HHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred HHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 677773 379999986 455432 332 46788888877654
No 348
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.54 E-value=0.0002 Score=55.26 Aligned_cols=71 Identities=13% Similarity=0.231 Sum_probs=48.6
Q ss_pred hhhHHHhHcCCCeEEEEEECCCChhhhhH-HHHHHHHHHHhhcCCCCeEEEEEeCccc-------hhhhhhCCcCcCCEE
Q 017971 50 ESNFDSAISSFDYILVDFYAPWCGHCKRL-APQLDEAAPILAKLKEPIVIAKVDADKY-------SRLASKQEIDAFPTL 121 (363)
Q Consensus 50 ~~~f~~~l~~~~~~lv~fy~~~C~~C~~~-~~~~~~~a~~~~~~~~~v~~~~vd~~~~-------~~l~~~~~i~~~Pt~ 121 (363)
.+.+++.+..++ ++.|+.+||++|++. .+.+.+... ..+.+..+|.+.+ .++.+.+|..++|++
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~------~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v 98 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNV------PKSKALVLELDEMSNGSEIQDALEEISGQKTVPNV 98 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCC------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCc------cCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE
Confidence 456666776554 677999999999988 777665321 1144555565543 357788899999996
Q ss_pred EEEeCCEEE
Q 017971 122 KIFMHGIPT 130 (363)
Q Consensus 122 ~~~~~g~~~ 130 (363)
|.+|+.+
T Consensus 99 --fi~g~~i 105 (129)
T 3ctg_A 99 --YINGKHI 105 (129)
T ss_dssp --EETTEEE
T ss_pred --EECCEEE
Confidence 5677655
No 349
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.53 E-value=0.00014 Score=54.31 Aligned_cols=67 Identities=16% Similarity=0.283 Sum_probs=48.7
Q ss_pred hhHHHhHcCCCeEEEEEEC-----CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCCcCcCCEE
Q 017971 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQEIDAFPTL 121 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~-----~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~~Pt~ 121 (363)
+.++++++.++ ++.|+. +||++|++..+.+.+. .+.+..+|.+++++ +.+..+..++|++
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~---------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST---------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT---------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc---------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 45777887655 445777 9999999998887653 16788899988765 4445678899985
Q ss_pred EEEeCCEEE
Q 017971 122 KIFMHGIPT 130 (363)
Q Consensus 122 ~~~~~g~~~ 130 (363)
|.+|+.+
T Consensus 75 --fi~g~~i 81 (109)
T 1wik_A 75 --YVRGDLV 81 (109)
T ss_dssp --ECSSSEE
T ss_pred --EECCEEE
Confidence 5677644
No 350
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.53 E-value=8.2e-05 Score=57.91 Aligned_cols=104 Identities=12% Similarity=0.234 Sum_probs=74.2
Q ss_pred CcccCChhhHHhhhcCCC--cEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CcEEEEEeccCchhHHhhcCCCC---CC
Q 017971 254 LSVPINQDTLNLLKDDKR--KIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQFADFADTFEANK---KS 326 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~--~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~~~~~~~~~gi~~---~~ 326 (363)
.+.+++.+++......++ ++++.|+. ......+.+...+.+++++++ ++.|+.+|+++.+.+++.+++.. ..
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a-~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFA-NWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECC-TTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 466788888886544333 66666654 355556677788888888886 49999999999999999999910 01
Q ss_pred CCCeEEEEeCCCCeeEEEEEEeehhhhhHhhh
Q 017971 327 KLPKMVVWDGNENYLTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 327 ~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~ 358 (363)
..|+++++..........+....+++..|+.+
T Consensus 87 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 87 QLPTLILFQGGKEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp CSSEEEEESSSSEEEEESCBCSSSCBCCCCCC
T ss_pred CCCEEEEEECCEEEEEecCcCchHHHHHHHhc
Confidence 79999999543345556677777777776644
No 351
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.45 E-value=0.00095 Score=51.20 Aligned_cols=89 Identities=12% Similarity=0.082 Sum_probs=69.5
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccC----------------------chhHHhhcCCCCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ----------------------FADFADTFEANKKS 326 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~----------------------~~~~~~~~gi~~~~ 326 (363)
.++++++.|+ .............+.+++++++++.|+.++.+. ...+.+.+|+ .
T Consensus 23 ~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i---~ 98 (136)
T 1lu4_A 23 QGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV---P 98 (136)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC---C
T ss_pred CCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCC---C
Confidence 4567877777 446677788888999999988888888888765 4567888888 5
Q ss_pred CCCeEEEEeCCCCeeEEE---EEEeehhhhhHhhhhhc
Q 017971 327 KLPKMVVWDGNENYLTVS---INVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 327 ~~P~~vi~~~~~~y~~~~---~~~~~~~~~~~~~~~~~ 361 (363)
..|++++++++|+.-... +....+++..++..+|+
T Consensus 99 ~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll~ 136 (136)
T 1lu4_A 99 WQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS 136 (136)
T ss_dssp SSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC--
T ss_pred CCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHhC
Confidence 789999999999765555 67778889998888763
No 352
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.42 E-value=0.00057 Score=58.86 Aligned_cols=102 Identities=13% Similarity=0.240 Sum_probs=76.0
Q ss_pred CCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhC----CCcEEEEEeccC-----chhHHhhcCCC
Q 017971 253 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASAN----RELVFCYVGIKQ-----FADFADTFEAN 323 (363)
Q Consensus 253 p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~----~~~~f~~vd~~~-----~~~~~~~~gi~ 323 (363)
+.+..+|..++..+...+.++++.|+. ..+... +...+.++|..+ +++.|+.||+++ ++.+++.||+
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~--~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V- 91 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDI--ASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV- 91 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEE--SSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTC-
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEEC--CCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCC-
Confidence 346788999999876666777777762 012222 778888888876 349999999988 7889999999
Q ss_pred CCCCCCeEEEEeCCCC---eeEE--EEEEeehhhhhHhhhhh
Q 017971 324 KKSKLPKMVVWDGNEN---YLTV--SINVLKTRVCFFMLTLL 360 (363)
Q Consensus 324 ~~~~~P~~vi~~~~~~---y~~~--~~~~~~~~~~~~~~~~~ 360 (363)
....+|+++++. |+ .... .+....+.+..|+...+
T Consensus 92 ~~~~~PTl~~F~--G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 92 DDKNFPSIFLFK--GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CTTSCCEEEEES--SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CcCCCCeEEEEe--CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 222899999998 44 3444 67778888999988764
No 353
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.41 E-value=0.00057 Score=52.82 Aligned_cols=85 Identities=11% Similarity=0.114 Sum_probs=68.0
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHH---HHHHHhCCCcEEEEEec----cCchhHHhhcCCCCCCCCCeEEEEeCCCCe--
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTL---KAAASANRELVFCYVGI----KQFADFADTFEANKKSKLPKMVVWDGNENY-- 340 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l---~~~a~~~~~~~f~~vd~----~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y-- 340 (363)
++++++.|+. .-....+.+...+ .++++.++++.++.+|. +....+++.||+ ...|++++++++|+.
T Consensus 31 ~k~vlv~F~a-~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v---~~~Pt~~~~d~~G~~v~ 106 (134)
T 2fwh_A 31 GKPVMLDLYA-DWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV---LGLPTILFFDGQGQEHP 106 (134)
T ss_dssp TSCEEEEEEC-TTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC---CSSSEEEEECTTSCBCG
T ss_pred CCcEEEEEEC-CCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC---CCCCEEEEECCCCCEee
Confidence 5777777774 4566677777777 78888888899999999 456779999999 679999999999876
Q ss_pred -eEEEEEEeehhhhhHhhh
Q 017971 341 -LTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 341 -~~~~~~~~~~~~~~~~~~ 358 (363)
+...|....+.+..++..
T Consensus 107 ~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 107 QARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp GGCBCSCCCHHHHHHHHHH
T ss_pred eeeeeeccCHHHHHHHHHh
Confidence 577888888888877654
No 354
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.37 E-value=0.00041 Score=48.59 Aligned_cols=77 Identities=8% Similarity=-0.010 Sum_probs=61.2
Q ss_pred EeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHh
Q 017971 278 VEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFM 356 (363)
Q Consensus 278 ~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~ 356 (363)
|........+.+...++++++++++ +.|..+|.++.+.+.+.+|+ ...|++++ +|+. ...+....+++..++
T Consensus 8 f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~---~G~~-~~~G~~~~~~l~~~l 80 (85)
T 1nho_A 8 FTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGL---MAVPAIAI---NGVV-RFVGAPSREELFEAI 80 (85)
T ss_dssp ESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCS---SCSSEEEE---TTTE-EEECSSCCHHHHHHH
T ss_pred EECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCc---eeeCEEEE---CCEE-EEccCCCHHHHHHHH
Confidence 3344455556677888888888885 99999999998899999999 67999999 6666 667777888999998
Q ss_pred hhhhc
Q 017971 357 LTLLQ 361 (363)
Q Consensus 357 ~~~~~ 361 (363)
.+.|.
T Consensus 81 ~~~le 85 (85)
T 1nho_A 81 NDEME 85 (85)
T ss_dssp HHHCC
T ss_pred HHHhC
Confidence 87763
No 355
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.32 E-value=0.002 Score=49.17 Aligned_cols=89 Identities=15% Similarity=0.035 Sum_probs=69.0
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccC-----------------------chhHHhhcCCCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKK 325 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~-----------------------~~~~~~~~gi~~~ 325 (363)
.++++++.|+ .............+++++++++++.|+.++.+. ...+.+.+|+
T Consensus 24 ~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i--- 99 (136)
T 1zzo_A 24 LGKPAVLWFW-APWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV--- 99 (136)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC---
T ss_pred CCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC---
Confidence 4567777777 446777788889999999988888888888743 3457778888
Q ss_pred CCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 326 SKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 326 ~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|++++++++|+.....+....+.+..++..+|.
T Consensus 100 ~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 100 TQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred CCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 578999999999976566677778888888887764
No 356
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.31 E-value=0.001 Score=56.27 Aligned_cols=85 Identities=19% Similarity=0.174 Sum_probs=58.7
Q ss_pred eEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc----------------------------chhhhhhC
Q 017971 62 YILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK----------------------------YSRLASKQ 113 (363)
Q Consensus 62 ~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l~~~~ 113 (363)
.+|+.|+++||+.|....+.+.++.+++++.+ +.+..|.++. +.++++.|
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~y 111 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLN--CKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKL 111 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcC--CEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHh
Confidence 44445689999999999999999999887543 7777776642 12456667
Q ss_pred CcC------------cCCEEEEEe-CCEEEe-ec----CCCCHHHHHHHHHhh
Q 017971 114 EID------------AFPTLKIFM-HGIPTE-YY----GPRKAELLVRYLKKF 148 (363)
Q Consensus 114 ~i~------------~~Pt~~~~~-~g~~~~-y~----g~~~~~~i~~~i~~~ 148 (363)
++. ..|+.+++. +|+... +. ..++.++|.+.+...
T Consensus 112 gv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 112 KIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp TCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 773 368888886 454332 22 246788888877654
No 357
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.31 E-value=0.00034 Score=57.96 Aligned_cols=45 Identities=18% Similarity=0.373 Sum_probs=37.4
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
..++.+|.|+++||+||+++.|.+.++.+.+.+ ++.|..++..-+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~---~v~~~~~p~~~~ 67 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD---DMYLRTEHVVWQ 67 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT---TEEEEEEECCCS
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC---CeEEEEecCCCC
Confidence 357899999999999999999999999876543 488888887543
No 358
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.30 E-value=0.00037 Score=52.45 Aligned_cols=102 Identities=12% Similarity=0.086 Sum_probs=72.1
Q ss_pred CCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEecc----CchhHHhhcCCCCCC
Q 017971 252 LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK----QFADFADTFEANKKS 326 (363)
Q Consensus 252 ~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~----~~~~~~~~~gi~~~~ 326 (363)
...+..++.+++......++++++.|+. ......+.+...+.+++++++. +.++-+|.. ..+.+++.+|+ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a-~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i---~ 86 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALDKKETATFFIGR-KTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGI---P 86 (118)
T ss_dssp TTTSEECCHHHHHHHHHTTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTC---C
T ss_pred HhhhhcCCHHHHHHHHhCCCeEEEEEEC-CCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCC---C
Confidence 3456677888888776777787777664 4677788889999999987764 555543332 24568899999 6
Q ss_pred CCCeEEEEeCCCCeeEEEEEEeehhhhhHhh
Q 017971 327 KLPKMVVWDGNENYLTVSINVLKTRVCFFML 357 (363)
Q Consensus 327 ~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~ 357 (363)
..|++++++..+......|....+.+..|+.
T Consensus 87 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 87 TVPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp SSCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred CCCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 7899999974434455566666777777654
No 359
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.30 E-value=0.00083 Score=53.06 Aligned_cols=103 Identities=15% Similarity=0.223 Sum_probs=75.5
Q ss_pred cccCCh-hhHHh-hh-cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCe
Q 017971 255 SVPINQ-DTLNL-LK-DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 330 (363)
Q Consensus 255 ~~~lt~-~~~~~-l~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~ 330 (363)
++.++. ++++. +. ...+++++-|.. .-....+.+...|.++|+++++ +.|+.||.++.+++...+++ ...|+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A-~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V---~siPT 98 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGH-DYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYEL---YDPVS 98 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEEC-TTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTC---CSSEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEEC-CCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCC---CCCCE
Confidence 445553 66665 33 355677766664 4667788899999999999987 99999999999999999999 68999
Q ss_pred EEEEeCCCCee---------EEEEEEe-ehhhhhHhhhhhc
Q 017971 331 MVVWDGNENYL---------TVSINVL-KTRVCFFMLTLLQ 361 (363)
Q Consensus 331 ~vi~~~~~~y~---------~~~~~~~-~~~~~~~~~~~~~ 361 (363)
++++...+.-. ...+.+. +++++.++..+++
T Consensus 99 ~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 99 VMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp EEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 99887654332 3445554 6677777766553
No 360
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.29 E-value=0.016 Score=55.73 Aligned_cols=137 Identities=12% Similarity=0.047 Sum_probs=101.8
Q ss_pred CCCCeEEEEcCCCCCcccccCCCCHHHHHHHHHhh--cCCCcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHH
Q 017971 216 DKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN--FLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTL 293 (363)
Q Consensus 216 ~~~p~iv~~~~~~~~~~~~~g~~~~~~l~~fi~~~--~~p~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l 293 (363)
...|++.+.+++.+....|.|--.-.++..|+.-- .-..-.+++.+..+.+.....+..+.+|........+.....+
T Consensus 60 ~~~p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l 139 (521)
T 1hyu_A 60 VRKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQAL 139 (521)
T ss_dssp SCSSEEEEECTTCCCSCEEESCCCGGGHHHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHH
T ss_pred cCCCEEEEecCCCcceEEEeccCcchhHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHH
Confidence 45699999876555567888876666777776552 1122357888888888765566666666666788888899999
Q ss_pred HHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhh
Q 017971 294 KAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTL 359 (363)
Q Consensus 294 ~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~ 359 (363)
.+++..++++.+..+|.+.++++.+.+|+ ...|++++ +|+.. ..+....+++..++.+.
T Consensus 140 ~~~a~~~~~v~~~~vd~~~~~~~~~~~~i---~svPt~~i---~g~~~-~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 140 NLMAVLNPRIKHTAIDGGTFQNEITERNV---MGVPAVFV---NGKEF-GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp HHHHHHCTTEEEEEEETTTCHHHHHHTTC---CSSSEEEE---TTEEE-EESCCCHHHHHHHHCCS
T ss_pred HHHHhHcCceEEEEEechhhHHHHHHhCC---CccCEEEE---CCEEE-ecCCCCHHHHHHHHhhc
Confidence 99999988899999999999999999999 67899988 55433 33666677777765543
No 361
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.28 E-value=0.0014 Score=51.70 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=74.4
Q ss_pred ChhhHHhhh--cCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEe
Q 017971 259 NQDTLNLLK--DDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (363)
Q Consensus 259 t~~~~~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~ 335 (363)
+.+++.... ..++++++.|+. .-....+.+...+.++++++++ +.|+.+|.++.+.+++.+++ ...|+++++.
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a-~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v---~~~Pt~~~~~ 85 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGR-DEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDI---SYIPSTVFFF 85 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEEC-TTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTC---CSSSEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCC---CccCeEEEEE
Confidence 456666543 446777776664 4677788889999999999988 99999999999999999999 6799999666
Q ss_pred CCCCe---------eEEEE-EEeehhhhhHhhhhh
Q 017971 336 GNENY---------LTVSI-NVLKTRVCFFMLTLL 360 (363)
Q Consensus 336 ~~~~y---------~~~~~-~~~~~~~~~~~~~~~ 360 (363)
..+.. ....+ ....+.+..++..++
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 44333 45566 566677777777665
No 362
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.27 E-value=0.00041 Score=48.58 Aligned_cols=80 Identities=10% Similarity=0.076 Sum_probs=61.5
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehh
Q 017971 273 IVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTR 351 (363)
Q Consensus 273 ~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~ 351 (363)
.++.|. .......+.....++++++++++ +.|..+|.++.+.+++.+|+ ...|++++ +|+. ...+....+.
T Consensus 5 ~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~---~G~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 5 KIELFT-SPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGI---MAVPTIVI---NGDV-EFIGAPTKEA 76 (85)
T ss_dssp EEEEEE-CCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTT---CCSSEEEE---TTEE-ECCSSSSSHH
T ss_pred EEEEEe-CCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCC---cccCEEEE---CCEE-eeecCCCHHH
Confidence 444444 44555566777888899999885 99999999988889999999 67899999 6665 5666667788
Q ss_pred hhhHhhhhh
Q 017971 352 VCFFMLTLL 360 (363)
Q Consensus 352 ~~~~~~~~~ 360 (363)
+..++.+.|
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 888877654
No 363
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.26 E-value=0.0011 Score=56.74 Aligned_cols=102 Identities=13% Similarity=0.189 Sum_probs=75.5
Q ss_pred CcccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CcEEEEEec-----cCchhHHhhcCCCCC
Q 017971 254 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGI-----KQFADFADTFEANKK 325 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~-----~~~~~~~~~~gi~~~ 325 (363)
.+.++|..++..+...+.++++.|+. ..++.. +...+.++|..+. ++.|+.||+ ..++.+++.|++ ..
T Consensus 6 ~v~~Lt~~nF~~~i~~~~~vlV~FyA--~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V-~~ 81 (240)
T 2qc7_A 6 GALPLDTVTFYKVIPKSKFVLVKFDT--QYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL-DK 81 (240)
T ss_dssp TCEECCTTHHHHHGGGCSEEEEEECC--SSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC-CG
T ss_pred CceECCHHHHHHHHcCCCCEEEEEeC--CCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC-CC
Confidence 46788999999876666777777763 012223 7888888888764 399999994 457899999999 21
Q ss_pred CCCCeEEEEeCCC--CeeEEEEEEeehhhhhHhhhh
Q 017971 326 SKLPKMVVWDGNE--NYLTVSINVLKTRVCFFMLTL 359 (363)
Q Consensus 326 ~~~P~~vi~~~~~--~y~~~~~~~~~~~~~~~~~~~ 359 (363)
..+|+++++.... .....++....+.+..|+...
T Consensus 82 ~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 82 ESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp GGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 2899999997644 355667878888899998765
No 364
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.26 E-value=0.0019 Score=54.53 Aligned_cols=107 Identities=8% Similarity=-0.020 Sum_probs=69.3
Q ss_pred CCCCCccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEECCC-Chhhh-----hHHHHHHHHHHHhhcCCCCeEEEEEe
Q 017971 29 RGLSSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPW-CGHCK-----RLAPQLDEAAPILAKLKEPIVIAKVD 102 (363)
Q Consensus 29 ~~~~~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy~~~-C~~C~-----~~~~~~~~~a~~~~~~~~~v~~~~vd 102 (363)
.|..+|+....+.++..+.|++ | .+++++|.||+.| |+.|. ...+.+.+. ++ .+.+..|.
T Consensus 24 vG~~APdFtL~d~~G~~vsLsd--~-----~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~----gv~VvgIS 89 (224)
T 3keb_A 24 KGDYLPSFMLVDDQKHDAALES--F-----SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP----HLKLIVIT 89 (224)
T ss_dssp TTCBCCCCEEEETTSCEEEGGG--G-----TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT----TSEEEEEE
T ss_pred CCCCCCCeEEECCCCCEEeHHH--h-----CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC----CCEEEEEE
Confidence 3455666666666666666654 2 4578999999998 99999 777777665 32 25555554
Q ss_pred Cc----------------------c-chhhhhhCCcCc---------CCEEEEEe-CCEEEe------ecCCCCHHHHHH
Q 017971 103 AD----------------------K-YSRLASKQEIDA---------FPTLKIFM-HGIPTE------YYGPRKAELLVR 143 (363)
Q Consensus 103 ~~----------------------~-~~~l~~~~~i~~---------~Pt~~~~~-~g~~~~------y~g~~~~~~i~~ 143 (363)
++ . +..+++.||+.. .|+.+++. +|.... +.+....+.+.+
T Consensus 90 ~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~ 169 (224)
T 3keb_A 90 VDSPSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEK 169 (224)
T ss_dssp SSCHHHHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHH
Confidence 32 2 357888898864 79999986 454321 234556777777
Q ss_pred HHHhhc
Q 017971 144 YLKKFV 149 (363)
Q Consensus 144 ~i~~~~ 149 (363)
.+....
T Consensus 170 ~L~~l~ 175 (224)
T 3keb_A 170 LLQEGE 175 (224)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 765543
No 365
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.22 E-value=0.0028 Score=48.94 Aligned_cols=101 Identities=9% Similarity=0.011 Sum_probs=70.8
Q ss_pred cCCCcccCChhhHHhhhcC-C--CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCC
Q 017971 251 FLPLSVPINQDTLNLLKDD-K--RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 327 (363)
Q Consensus 251 ~~p~~~~lt~~~~~~l~~~-~--~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~ 327 (363)
.+..+.+++.+++...... + +++++.|+ ..-....+.+...+.+++.+++++.|+.||.++.. +.|++ ..
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~-a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~---~~~~i---~~ 80 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLY-RSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCI---EHYHD---NC 80 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC---SSCCS---SC
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc---ccCCC---CC
Confidence 3455677788888764332 2 35555554 45677788899999999999988999999998754 67888 67
Q ss_pred CCeEEEEeCCCCeeEEEEEE-------eehhhhhHhhh
Q 017971 328 LPKMVVWDGNENYLTVSINV-------LKTRVCFFMLT 358 (363)
Q Consensus 328 ~P~~vi~~~~~~y~~~~~~~-------~~~~~~~~~~~ 358 (363)
.|++++++.........+-. ..+.++.++..
T Consensus 81 ~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~ 118 (135)
T 2dbc_A 81 LPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSE 118 (135)
T ss_dssp CSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHH
T ss_pred CCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHH
Confidence 99999998433344444432 55667666654
No 366
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.12 E-value=0.0019 Score=49.86 Aligned_cols=101 Identities=12% Similarity=0.092 Sum_probs=71.6
Q ss_pred cccCCh-hhHHhhhcC--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeE
Q 017971 255 SVPINQ-DTLNLLKDD--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 331 (363)
Q Consensus 255 ~~~lt~-~~~~~l~~~--~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~ 331 (363)
+.+++. +++..+... ++++++.|+ .......+.+...+.++++++ ++.|+.+|.+..+.+++.||+ ...|++
T Consensus 22 v~~l~~~~~~~~~l~~~~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 96 (133)
T 3cxg_A 22 YIELKNTGSLNQVFSSTQNSSIVIKFG-AVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNI---KALPTF 96 (133)
T ss_dssp EEECCCTTHHHHHHTC-CCSEEEEEEE-CTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred EEEecChhHHHHHHHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCC---CCCCEE
Confidence 444553 566654433 345666555 446777778888888887776 589999999999999999999 679999
Q ss_pred EEEe-CCCC---eeEEEEEEeehhhhhHhhhhhc
Q 017971 332 VVWD-GNEN---YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 332 vi~~-~~~~---y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++. ++|+ .....+. ..+.+..++..+|+
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9993 3443 3344444 67788888887764
No 367
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.10 E-value=0.002 Score=50.40 Aligned_cols=75 Identities=17% Similarity=0.239 Sum_probs=59.0
Q ss_pred ChhhHHh-hhc-CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEe
Q 017971 259 NQDTLNL-LKD-DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD 335 (363)
Q Consensus 259 t~~~~~~-l~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~ 335 (363)
+.+++.. +.. .++++++.|+. .-....+.+...+.++++++++ +.|+.+|.++.+.+++.+|+ ...|++++++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a-~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i---~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGH-DWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL---YDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEEC-TTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCS---CSSCEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCC---CCCCEEEEEE
Confidence 3566664 333 46777777664 4677778889999999998865 99999999998999999999 6799999997
Q ss_pred CC
Q 017971 336 GN 337 (363)
Q Consensus 336 ~~ 337 (363)
..
T Consensus 86 ~G 87 (142)
T 1qgv_A 86 RN 87 (142)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 368
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.08 E-value=0.0011 Score=51.03 Aligned_cols=92 Identities=9% Similarity=0.160 Sum_probs=69.1
Q ss_pred cCCCcEEEEEEeCCChhhHHHHHHHHH--HHHHhCCC-cEEEEEec---cCchhHHhhcCCCCCCCCCeEEEEeCCCC-e
Q 017971 268 DDKRKIVLAIVEDETEEKSQKLVTTLK--AAASANRE-LVFCYVGI---KQFADFADTFEANKKSKLPKMVVWDGNEN-Y 340 (363)
Q Consensus 268 ~~~~~~~i~~~~~~~~~~~~~~~~~l~--~~a~~~~~-~~f~~vd~---~~~~~~~~~~gi~~~~~~P~~vi~~~~~~-y 340 (363)
..++++++.|.. .-....+.+...+. +++..+++ +.++.+|. +..+.+++.+|+......|++++++++|+ .
T Consensus 27 ~~~k~vlv~f~a-~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 27 RTHKPTLLVFGA-NWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp HHTCCEEEEEEC-TTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred hcCCcEEEEEcC-CCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 456788777764 46677777888888 88887754 99999999 77888999999821157899999999886 3
Q ss_pred eEEEE-------EEeehhhhhHhhhhh
Q 017971 341 LTVSI-------NVLKTRVCFFMLTLL 360 (363)
Q Consensus 341 ~~~~~-------~~~~~~~~~~~~~~~ 360 (363)
+...+ ....+.+..|+..+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHhc
Confidence 34444 466778888887664
No 369
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.02 E-value=0.0014 Score=49.99 Aligned_cols=89 Identities=4% Similarity=0.036 Sum_probs=65.7
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhCCC-cEEEEEecc--CchhHHhhcCCCCCCCCCeEEEEeCCCC-ee
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTL---KAAASANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNEN-YL 341 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l---~~~a~~~~~-~~f~~vd~~--~~~~~~~~~gi~~~~~~P~~vi~~~~~~-y~ 341 (363)
.++++++.|+. ......+.+...+ ..+++.+.. +.++.+|.+ ....+++.+|+ ...|++++++++|+ .+
T Consensus 26 ~~k~vlv~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 26 EDKLLFVDCFT-TWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGV---HAYPTLLFINSSGEVVY 101 (130)
T ss_dssp HSSCEEEEECC-TTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTC---CSSCEEEEECTTSCEEE
T ss_pred cCCeEEEEEEC-CCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCC---CCCCEEEEECCCCcEEE
Confidence 45777777764 3555666666666 555555443 888899987 46789999999 67999999998875 44
Q ss_pred EEEEEEeehhhhhHhhhhhc
Q 017971 342 TVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|....+++..|+...+.
T Consensus 102 ~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 102 RLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp EEESCCCHHHHHHHHHHHHS
T ss_pred EecCCCCHHHHHHHHHHHHH
Confidence 56677778889998887764
No 370
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.02 E-value=0.0017 Score=49.26 Aligned_cols=99 Identities=9% Similarity=0.153 Sum_probs=68.0
Q ss_pred cccCChhhHHhhhcC--CCcEEEEEEeCC------ChhhHHHHHHHHHHHHHhCCC-cEEEEEec-------cCchhHHh
Q 017971 255 SVPINQDTLNLLKDD--KRKIVLAIVEDE------TEEKSQKLVTTLKAAASANRE-LVFCYVGI-------KQFADFAD 318 (363)
Q Consensus 255 ~~~lt~~~~~~l~~~--~~~~~i~~~~~~------~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~-------~~~~~~~~ 318 (363)
+...+.+++...... ++++++.|+.+. -......+...+.++++++++ +.|+.+|. +..+.+.+
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 344556666654433 667777666431 566678889999999999875 99999999 66788999
Q ss_pred hcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhh
Q 017971 319 TFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFML 357 (363)
Q Consensus 319 ~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~ 357 (363)
.+++ ...|++++++..++..-..+ ...++++.|+.
T Consensus 87 ~~~i---~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 87 NLKV---TAVPTLLKYGTPQKLVESEC-LQANLVEMLFS 121 (123)
T ss_dssp HHCC---CSSSEEEETTSSCEEEGGGG-GCHHHHHHHHH
T ss_pred HCCC---CeeCEEEEEcCCceEecccc-CCHHHHHHHHh
Confidence 9999 67999999988433322211 23445555543
No 371
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.00 E-value=0.0001 Score=56.48 Aligned_cols=101 Identities=10% Similarity=0.143 Sum_probs=70.7
Q ss_pred cccC-ChhhHHhhhc----CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCC
Q 017971 255 SVPI-NQDTLNLLKD----DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 329 (363)
Q Consensus 255 ~~~l-t~~~~~~l~~----~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P 329 (363)
+.++ +.+++..... .++++++.|+ .......+.+...+.+++.+++++.|+.+|.+..+.+++.+|+ ...|
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~P 91 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNV---EAMP 91 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECC-SSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTC---CSSC
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCC---Cccc
Confidence 3444 3355554332 3566666665 3345555566778888888888899999999998999999999 6789
Q ss_pred eEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+++++ .+|+ .....+ ...+.+..++..+|+
T Consensus 92 t~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 92 TFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVG 122 (130)
T ss_dssp CCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTS
T ss_pred eEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHh
Confidence 99888 4443 333444 467788888887775
No 372
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.92 E-value=0.0056 Score=50.94 Aligned_cols=87 Identities=18% Similarity=0.196 Sum_probs=59.9
Q ss_pred CCCeEEEEEECCCChhhhhHHHHH-HHHHHHhhcCCCCeEEEEEeCc---------------------------------
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQL-DEAAPILAKLKEPIVIAKVDAD--------------------------------- 104 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~-~~~a~~~~~~~~~v~~~~vd~~--------------------------------- 104 (363)
..+..+|.|....|++|+++.+.. ..+.+.+-+ .++|.|...+..
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~-~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~ 106 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFID-KGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFE 106 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhcc-CCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 346889999999999999999886 455555422 223666654421
Q ss_pred --------------------------------------------cchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHH
Q 017971 105 --------------------------------------------KYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAEL 140 (363)
Q Consensus 105 --------------------------------------------~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~ 140 (363)
.+...++++||.++|++++ +|+. +.|..+.+.
T Consensus 107 ~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~--~~G~~~~e~ 182 (202)
T 3gha_A 107 KQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV--IKNFADYDE 182 (202)
T ss_dssp HCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE--CSCTTCHHH
T ss_pred hCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE--ecCCCCHHH
Confidence 0012345568999999987 7765 568888888
Q ss_pred HHHHHHhhcC
Q 017971 141 LVRYLKKFVA 150 (363)
Q Consensus 141 i~~~i~~~~~ 150 (363)
+.+.|.+...
T Consensus 183 l~~~i~~~~~ 192 (202)
T 3gha_A 183 IKETIEKELK 192 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876543
No 373
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.84 E-value=0.00049 Score=56.80 Aligned_cols=42 Identities=14% Similarity=0.366 Sum_probs=32.9
Q ss_pred CeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEeCcc
Q 017971 61 DYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVDADK 105 (363)
Q Consensus 61 ~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd~~~ 105 (363)
++.+|.|++.||+||+++.|.+ .++.+.+.+ ++.|..++..-
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ---GSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT---TCCEEEEECSS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCC---CCEEEEEechh
Confidence 6889999999999999999987 566655433 47777777643
No 374
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.011 Score=49.41 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=71.9
Q ss_pred CCCCccccccC-CCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc--
Q 017971 30 GLSSEEETKFK-IDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK-- 105 (363)
Q Consensus 30 ~~~~~~~~~~~-~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~-- 105 (363)
+..+|+...+. .++...+++-++| .++.+++.|| +.||+.|....+.+.+...++++.+ +.+..|.++.
T Consensus 26 G~~APdF~l~a~~d~~~~~vsLsd~-----~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g--~~vigiS~Ds~~ 98 (216)
T 3sbc_A 26 QKQAPTFKKTAVVDGVFDEVSLDKY-----KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQG--AQVLFASTDSEY 98 (216)
T ss_dssp TSBCCCCCEEEEETTEEEEECGGGG-----TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTT--EEEEEEESSCHH
T ss_pred CCcCCCCCCcceECCCCcEEehHHh-----CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCC--ceEEEeecCchh
Confidence 44455544331 1333445555554 4578899999 8999999999999999999988764 6666666542
Q ss_pred --------------------------chhhhhhCCcC------cCCEEEEEeCCEEEe----e--cCCCCHHHHHHHHHh
Q 017971 106 --------------------------YSRLASKQEID------AFPTLKIFMHGIPTE----Y--YGPRKAELLVRYLKK 147 (363)
Q Consensus 106 --------------------------~~~l~~~~~i~------~~Pt~~~~~~g~~~~----y--~g~~~~~~i~~~i~~ 147 (363)
+.++++.||+- ..+..++......++ | .-.|+.+++++-+..
T Consensus 99 sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 99 SLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp HHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 34578888873 346666665443332 2 235778877776644
No 375
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.80 E-value=0.0071 Score=47.96 Aligned_cols=89 Identities=8% Similarity=0.062 Sum_probs=66.7
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCchhHHhhc--------------------------
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTF-------------------------- 320 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~~~~~~-------------------------- 320 (363)
.++++++.|+ .............+.++++++++ +.++.|+.++.+..++.+
T Consensus 33 ~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3or5_A 33 KGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYID 111 (165)
T ss_dssp TTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTST
T ss_pred CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhc
Confidence 4567777776 45667778888889998888775 888888877644433333
Q ss_pred -CCCCCCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 321 -EANKKSKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 321 -gi~~~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
|+ ...|++++++++|+. +...+....+.+..++..+|.
T Consensus 112 ~~i---~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 112 GGI---TGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp TCS---CSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred cCC---CCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 55 578999999999874 555677788899999988875
No 376
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.76 E-value=0.0025 Score=53.74 Aligned_cols=81 Identities=16% Similarity=0.297 Sum_probs=61.5
Q ss_pred CCcccC-ChhhHHhhhc-C--CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCC
Q 017971 253 PLSVPI-NQDTLNLLKD-D--KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 328 (363)
Q Consensus 253 p~~~~l-t~~~~~~l~~-~--~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~ 328 (363)
..+.++ +..++..... . ++++++.|+ .......+.+...+..+|.+++++.|+.||+. .+.++..|++ ..+
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i---~~~ 173 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIY-EDGVRGCDALNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSS---DVL 173 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEE-CTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCG---GGC
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCC---CCC
Confidence 345566 6677766443 2 256666666 44677778889999999999988999999998 6778888988 678
Q ss_pred CeEEEEeCCCC
Q 017971 329 PKMVVWDGNEN 339 (363)
Q Consensus 329 P~~vi~~~~~~ 339 (363)
|+++++. +|+
T Consensus 174 PTl~~~~-~G~ 183 (217)
T 2trc_P 174 PTLLVYK-GGE 183 (217)
T ss_dssp SEEEEEE-TTE
T ss_pred CEEEEEE-CCE
Confidence 9999997 453
No 377
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.0028 Score=48.49 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=45.5
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc---hh----hhhhCCcCcCCEEEE
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---SR----LASKQEIDAFPTLKI 123 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~---~~----l~~~~~i~~~Pt~~~ 123 (363)
++|+++++.++ ++.|+.+||++|++....+.+.. ..+ +.+..+|.+.. .+ +.+..|...+|++++
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~----~~~--v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI 76 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEY----QFI--PNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV 76 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHE----EEE--SCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhc----ccC--CCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE
Confidence 56888887655 77799999999999988887631 111 33444555432 12 333458889999854
Q ss_pred EeCCEEE
Q 017971 124 FMHGIPT 130 (363)
Q Consensus 124 ~~~g~~~ 130 (363)
+|+.+
T Consensus 77 --~G~~I 81 (127)
T 3l4n_A 77 --NGVSR 81 (127)
T ss_dssp --TTEEC
T ss_pred --CCEEE
Confidence 66543
No 378
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.74 E-value=0.0081 Score=46.49 Aligned_cols=89 Identities=10% Similarity=0.069 Sum_probs=68.2
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEecc---------------------------CchhHHhhc
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK---------------------------QFADFADTF 320 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~---------------------------~~~~~~~~~ 320 (363)
.++++++.|+. ............++++++++++ +.|+.++.+ ....+.+.|
T Consensus 28 ~gk~~lv~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 28 GEKPTLIHFWS-ISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp TTSCEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEc-CCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 45677777774 4667778888899999888877 888888743 245688889
Q ss_pred CCCCCCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 321 EANKKSKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 321 gi~~~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
|+ ...|++++++++|+. +...+....+.+..++..+|+
T Consensus 107 ~v---~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 107 EN---EYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp CC---CCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred CC---CCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 98 578999999999864 445566677888888888875
No 379
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.71 E-value=0.006 Score=45.24 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=65.7
Q ss_pred hhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchh----HHhhcCCCCCCCCCeEEEEe
Q 017971 260 QDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFAD----FADTFEANKKSKLPKMVVWD 335 (363)
Q Consensus 260 ~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~----~~~~~gi~~~~~~P~~vi~~ 335 (363)
.+.++.+...++|+++.+. .......+.....+.+.+.. .++.|.++|..++.. ++..+|+ ....|++++++
T Consensus 14 ~e~f~~ii~~~~~vvi~kh-atwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V--~h~sPq~il~k 89 (112)
T 3iv4_A 14 IDQFEQVIEENKYVFVLKH-SETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNV--KHESPQAFYFV 89 (112)
T ss_dssp HHHHHHHHHHCSEEEEEEE-CTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTC--CCCSSEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEE-CCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCC--ccCCCeEEEEE
Confidence 4566666555667776665 45777778888889888875 569999999998754 7999999 23589999998
Q ss_pred CCCC-eeEEEEEEeehhhhh
Q 017971 336 GNEN-YLTVSINVLKTRVCF 354 (363)
Q Consensus 336 ~~~~-y~~~~~~~~~~~~~~ 354 (363)
.... +-..-..++.+.+..
T Consensus 90 ~G~~v~~~SH~~I~~~~l~~ 109 (112)
T 3iv4_A 90 NGEMVWNRDHGDINVSSLAQ 109 (112)
T ss_dssp TTEEEEEEEGGGCSHHHHHH
T ss_pred CCEEEEEeeccccCHHHHHH
Confidence 7753 444555565555544
No 380
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=96.64 E-value=0.02 Score=45.44 Aligned_cols=88 Identities=10% Similarity=0.100 Sum_probs=65.8
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEecc------------------Cc-----------------
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK------------------QF----------------- 313 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~------------------~~----------------- 313 (363)
.++++++.|+ .............|++++++++++.|+.|+.+ ..
T Consensus 36 ~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFM-AAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 3467777776 44566677788889999988888888888765 22
Q ss_pred -----hhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEE-eehhhhhHhhhhhc
Q 017971 314 -----ADFADTFEANKKSKLPKMVVWDGNENYLTVSINV-LKTRVCFFMLTLLQ 361 (363)
Q Consensus 314 -----~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~-~~~~~~~~~~~~~~ 361 (363)
..+.+.||+ ...|++++++++|+... .+.. ..+.+..++..+|.
T Consensus 115 ~~~d~~~~~~~~~v---~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 115 MVMDDGSLVEKFNV---RSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp EEECCSHHHHHTTC---CSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC--
T ss_pred EEeChHHHHHHhCC---CCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHhc
Confidence 256677777 57899999999998777 7777 78888888887763
No 381
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.58 E-value=0.01 Score=46.90 Aligned_cols=92 Identities=13% Similarity=0.080 Sum_probs=65.3
Q ss_pred cCCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhC-CCcEEEEEeccCc-----------hhHHhhcCCCCCCCCCeEE
Q 017971 268 DDKRKIVLAIVEDETEEKSQKLVTTL---KAAASAN-RELVFCYVGIKQF-----------ADFADTFEANKKSKLPKMV 332 (363)
Q Consensus 268 ~~~~~~~i~~~~~~~~~~~~~~~~~l---~~~a~~~-~~~~f~~vd~~~~-----------~~~~~~~gi~~~~~~P~~v 332 (363)
..++++++.|+...-....+.....+ .++++.. .++.++.+|.... ..+++.|++ ...|+++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v---~~~Pt~~ 121 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKV---TGFPELV 121 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTC---CSSSEEE
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCC---CCCCEEE
Confidence 34577777776334566667777766 5665544 3489999998764 378899999 5799999
Q ss_pred EEeCCCCeeEEEEEE--eehhhhhHhhhhhcC
Q 017971 333 VWDGNENYLTVSINV--LKTRVCFFMLTLLQF 362 (363)
Q Consensus 333 i~~~~~~y~~~~~~~--~~~~~~~~~~~~~~~ 362 (363)
+++++|+.....+.. ..+.+..++..+|+-
T Consensus 122 ~~d~~G~~~~~~G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 122 FIDAEGKQLARMGFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp EECTTCCEEEEECCCTTCHHHHHHHHHHHHTC
T ss_pred EEcCCCCEEEEecCCCCCHHHHHHHHHHHHhc
Confidence 999998643322666 677888888887753
No 382
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.55 E-value=0.0012 Score=54.16 Aligned_cols=40 Identities=20% Similarity=0.279 Sum_probs=33.3
Q ss_pred CCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~ 104 (363)
+++.+|+|++.||+||+++.|.+.++.+.+ + +.|..+...
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~----v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G----TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T----SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C----CeEEEEecc
Confidence 578999999999999999999999999877 2 555566543
No 383
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.55 E-value=0.0033 Score=59.00 Aligned_cols=81 Identities=9% Similarity=0.143 Sum_probs=65.0
Q ss_pred CcccCChhhHHhhhcCC--CcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---------CcEEEEEeccCchhHHhhcCC
Q 017971 254 LSVPINQDTLNLLKDDK--RKIVLAIVEDETEEKSQKLVTTLKAAASANR---------ELVFCYVGIKQFADFADTFEA 322 (363)
Q Consensus 254 ~~~~lt~~~~~~l~~~~--~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~---------~~~f~~vd~~~~~~~~~~~gi 322 (363)
.+.+++.+++..+...+ +++++.|+. .-....+.+...+.++++.++ .+.|+.||+++++.+++.|++
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA-~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V 102 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYN-DGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDI 102 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEEC-TTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTC
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCC
Confidence 36678888888755433 567777764 467777889999999999886 299999999999999999999
Q ss_pred CCCCCCCeEEEEeCCC
Q 017971 323 NKKSKLPKMVVWDGNE 338 (363)
Q Consensus 323 ~~~~~~P~~vi~~~~~ 338 (363)
...|+++++++.|
T Consensus 103 ---~~~PTlilf~~gg 115 (470)
T 3qcp_A 103 ---NFVPRLFFFYPRD 115 (470)
T ss_dssp ---CSSCEEEEEEESS
T ss_pred ---CccCeEEEEECCC
Confidence 6899999997653
No 384
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.54 E-value=0.015 Score=44.79 Aligned_cols=84 Identities=8% Similarity=0.087 Sum_probs=63.4
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CcEEEEEeccC-------------------------chhHHhhcC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQ-------------------------FADFADTFE 321 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~-------------------------~~~~~~~~g 321 (363)
.++++++.|+ .............+.+++++++ ++.++.++.+. ...+.+.|+
T Consensus 33 ~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 5567777777 4567777888899999999987 48888887743 446788888
Q ss_pred CCCCCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHh
Q 017971 322 ANKKSKLPKMVVWDGNENY-LTVSINVLKTRVCFFM 356 (363)
Q Consensus 322 i~~~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~ 356 (363)
+ ...|++++++++|+. +...+....+++..++
T Consensus 112 v---~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 I---ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp C---CEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred c---CccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 8 578999999999864 4566666666666554
No 385
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.46 E-value=0.009 Score=51.24 Aligned_cols=82 Identities=17% Similarity=0.288 Sum_probs=62.8
Q ss_pred CCCcccC-ChhhHHhhhc---CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCC
Q 017971 252 LPLSVPI-NQDTLNLLKD---DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 327 (363)
Q Consensus 252 ~p~~~~l-t~~~~~~l~~---~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~ 327 (363)
+..+.++ +..++..... .++++++.|+. ......+.+...+..+|.+++++.|+.||+.. +.++..|++ ..
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya-~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I---~~ 185 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYE-DGIKGCDALNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSS---DV 185 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEEC-TTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCT---TT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEEC-CCChHHHHHHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCC---CC
Confidence 3445667 6777776543 25666666664 46777788899999999999999999999976 668888888 67
Q ss_pred CCeEEEEeCCCC
Q 017971 328 LPKMVVWDGNEN 339 (363)
Q Consensus 328 ~P~~vi~~~~~~ 339 (363)
+|+++++. +|+
T Consensus 186 ~PTll~~~-~G~ 196 (245)
T 1a0r_P 186 LPTLLVYK-GGE 196 (245)
T ss_dssp CSEEEEEE-TTE
T ss_pred CCEEEEEE-CCE
Confidence 99999997 553
No 386
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.33 E-value=0.0035 Score=48.50 Aligned_cols=68 Identities=21% Similarity=0.275 Sum_probs=45.2
Q ss_pred hhHHHhHcCCCeEEEEEEC----CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhh----CCcCcCCEEE
Q 017971 51 SNFDSAISSFDYILVDFYA----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASK----QEIDAFPTLK 122 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~----~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~----~~i~~~Pt~~ 122 (363)
+.+++.+..+ .++|+.++ +||++|++....+.+. + +.+..+|.++++++.+. .|...+|.++
T Consensus 26 ~~v~~~i~~~-~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------g--v~y~~vdI~~d~~~~~~L~~~~G~~tvP~Vf 95 (135)
T 2wci_A 26 EKIQRQIAEN-PILLYMKGSPKLPSCGFSAQAVQALAAC-------G--ERFAYVDILQNPDIRAELPKYANWPTFPQLW 95 (135)
T ss_dssp HHHHHHHHHC-SEEEEESBCSSSBSSHHHHHHHHHHHTT-------C--SCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHhccC-CEEEEEEecCCCCCCccHHHHHHHHHHc-------C--CceEEEECCCCHHHHHHHHHHHCCCCcCEEE
Confidence 4566666654 34444443 8999999887777542 2 66778888877655443 4778899864
Q ss_pred EEeCCEEE
Q 017971 123 IFMHGIPT 130 (363)
Q Consensus 123 ~~~~g~~~ 130 (363)
.+|+.+
T Consensus 96 --I~G~~i 101 (135)
T 2wci_A 96 --VDGELV 101 (135)
T ss_dssp --ETTEEE
T ss_pred --ECCEEE
Confidence 577654
No 387
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=96.29 E-value=0.023 Score=43.85 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=61.2
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhC-CC--cEEEEEeccC-------------------------chhHHhhc
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASAN-RE--LVFCYVGIKQ-------------------------FADFADTF 320 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~-~~--~~f~~vd~~~-------------------------~~~~~~~~ 320 (363)
.++++++.|+. ............+.++++++ ++ +.++.++.+. ...+.+.|
T Consensus 32 ~gk~vll~F~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWA-SWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEEC-GGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEEC-CCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 44677777763 34455667778888888887 44 7888876654 34678889
Q ss_pred CCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 321 EANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 321 gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
|+ ...|++++++++|+...... ..+.+..++..+|.
T Consensus 111 ~v---~~~P~~~lid~~G~i~~~~~--~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AI---LTLPTNILLSPTGKILARDI--QGEALTGKLKELLK 146 (148)
T ss_dssp TC---CSSSEEEEECTTSBEEEESC--CHHHHHHHHHHHC-
T ss_pred CC---CCcCEEEEECCCCeEEEecC--CHHHHHHHHHHHHc
Confidence 98 57899999999986443332 66677777777664
No 388
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.28 E-value=0.021 Score=44.54 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=65.8
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccC----------------------chhHHhhcCCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ----------------------FADFADTFEANK 324 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~----------------------~~~~~~~~gi~~ 324 (363)
.++++++.|+ .............+.++++++++ +.++.|+.+. ...+.+.||+
T Consensus 25 ~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 101 (151)
T 2f9s_A 25 KGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDV-- 101 (151)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTC--
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCC--
Confidence 3467777666 44666777888888888887654 8888887654 2357788888
Q ss_pred CCCCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 325 KSKLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 325 ~~~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|++++++++|+ .+...+....+.+..++..+|+
T Consensus 102 -~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~ 138 (151)
T 2f9s_A 102 -SPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKP 138 (151)
T ss_dssp -CSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred -CCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHh
Confidence 57899999999985 3445566778888888888775
No 389
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.23 E-value=0.00074 Score=51.67 Aligned_cols=95 Identities=12% Similarity=0.093 Sum_probs=68.1
Q ss_pred HHhhhcCCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhCCC-cEEEEEecc--CchhHHhhcCCCCCCCCCeEEEEeC
Q 017971 263 LNLLKDDKRKIVLAIVEDETEEKSQKLVTTL---KAAASANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDG 336 (363)
Q Consensus 263 ~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l---~~~a~~~~~-~~f~~vd~~--~~~~~~~~~gi~~~~~~P~~vi~~~ 336 (363)
+......++++++.|+. ......+.+...+ .++++.+++ +.++.+|.+ +...+++.+|+ ...|+++++++
T Consensus 12 ~~~~~~~~k~vlv~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~d~ 87 (130)
T 2lst_A 12 LALAQAHGRMVMVYFHS-EHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRV---PGTPTFVFLVP 87 (130)
Confidence 33344455677766653 3455556667777 777777766 888888884 45778999999 67999999986
Q ss_pred C-CCe---eEEEEEEeehhhhhHhhhhhc
Q 017971 337 N-ENY---LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 337 ~-~~y---~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+ |+. ....+....+.+..++..+++
T Consensus 88 ~~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 88 KAGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 4 653 567777788888888887764
No 390
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=96.22 E-value=0.026 Score=45.26 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=60.1
Q ss_pred cCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeC
Q 017971 257 PINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG 336 (363)
Q Consensus 257 ~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~ 336 (363)
.++......+.....+.+++.|-..-..........|.+++..++++.|..+|.++.+.....|+-......|++++++.
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~ 119 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDE 119 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECT
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECC
Confidence 34455555554333344444444556778888999999999998889999999988888888886211267899999999
Q ss_pred CCCe
Q 017971 337 NENY 340 (363)
Q Consensus 337 ~~~y 340 (363)
+|+.
T Consensus 120 ~G~~ 123 (167)
T 1z6n_A 120 EFNL 123 (167)
T ss_dssp TCCE
T ss_pred CCCE
Confidence 8764
No 391
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=96.21 E-value=0.032 Score=43.52 Aligned_cols=87 Identities=8% Similarity=0.103 Sum_probs=61.9
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccC-------------------------chhHHhhcC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-------------------------FADFADTFE 321 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~-------------------------~~~~~~~~g 321 (363)
.++++++.|+. ............++++++++++ +.++.|+.+. ...+.+.||
T Consensus 28 ~gk~vll~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWF-AGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEEC-TTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEEC-CCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 34667766664 4555667778888888887665 8888887765 456788899
Q ss_pred CCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 322 ANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 322 i~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+ ...|++++++++|+.-... +..+++..++..+++
T Consensus 107 v---~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 107 I---VGFPHIILVDPEGKIVAKE--LRGDDLYNTVEKFVN 141 (152)
T ss_dssp C---CSSCEEEEECTTSEEEEEC--CCTTHHHHHHHHHHT
T ss_pred C---CcCCeEEEECCCCeEEEee--CCHHHHHHHHHHHHh
Confidence 8 5789999999998643322 345677777777765
No 392
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.04 E-value=0.053 Score=48.48 Aligned_cols=104 Identities=12% Similarity=0.103 Sum_probs=70.6
Q ss_pred CccccccCCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-------
Q 017971 33 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------- 104 (363)
Q Consensus 33 ~~~~~~~~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~------- 104 (363)
.|+.+.++.++..+.|++- .++++++.|| +.||+.|....+.|.+. + ..++.+..|+++
T Consensus 4 ~p~F~l~~~~G~~~~Lsd~-------~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~--~~~~~v~gis~D~~~~~~~ 70 (322)
T 4eo3_A 4 VKHFELLTDEGKTFTHVDL-------YGKYTILFFFPKAGTSGSTREAVEFSRE----N--FEKAQVVGISRDSVEALKR 70 (322)
T ss_dssp CCCCEEEETTSCEEEGGGT-------TTSEEEEEECSSTTSHHHHHHHHHHHHS----C--CTTEEEEEEESCCHHHHHH
T ss_pred CCCcEEECCCcCEEeHHHh-------CCCeEEEEEECCCCCCCCHHHHHHHHHH----h--hCCCEEEEEeCCCHHHHHH
Confidence 4566667777888887753 5689999999 46899999887777541 1 123666666543
Q ss_pred --------------cchhhhhhCCcC----cCCEEEEEe-CCEEE-eecC---CCCHHHHHHHHHhhc
Q 017971 105 --------------KYSRLASKQEID----AFPTLKIFM-HGIPT-EYYG---PRKAELLVRYLKKFV 149 (363)
Q Consensus 105 --------------~~~~l~~~~~i~----~~Pt~~~~~-~g~~~-~y~g---~~~~~~i~~~i~~~~ 149 (363)
.+.++++.|||. .+|+.++.. +|... .|.+ ...++++.+++++..
T Consensus 71 f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 71 FKEKNDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp HHHHHTCCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred HHHhhCCceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 345688889984 467877775 56543 2544 445788999988774
No 393
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.00 E-value=0.022 Score=48.22 Aligned_cols=41 Identities=7% Similarity=0.199 Sum_probs=28.9
Q ss_pred CCeEEEEEECCCChhhhhHHHHH-HHHHHHhhcCCCCeEEEEE
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQL-DEAAPILAKLKEPIVIAKV 101 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~-~~~a~~~~~~~~~v~~~~v 101 (363)
.+..++.|....|++|+++.+.. .++.+.+-+ .++|.+...
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~-~g~V~~v~~ 80 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYID-TGKMLYIFR 80 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTT-TTSEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHccc-CCeEEEEEE
Confidence 46789999999999999999964 667665521 123555433
No 394
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=95.99 E-value=0.021 Score=46.16 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=35.3
Q ss_pred HHHhHcCCCeEEEEEECCCChhhhh-HHHHHHHHHHHhhcCCCCe-EEEEEeCc
Q 017971 53 FDSAISSFDYILVDFYAPWCGHCKR-LAPQLDEAAPILAKLKEPI-VIAKVDAD 104 (363)
Q Consensus 53 f~~~l~~~~~~lv~fy~~~C~~C~~-~~~~~~~~a~~~~~~~~~v-~~~~vd~~ 104 (363)
+.+.+.....+|+.|++.||+.|.. ..|.|.+..++++..+ + .+..|.++
T Consensus 41 Lsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g--~d~VigIS~D 92 (176)
T 4f82_A 41 VRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG--IDEIWCVSVN 92 (176)
T ss_dssp HHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESS
T ss_pred HHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC--CCEEEEEeCC
Confidence 4444434335566777999999999 9999999999988665 4 44445443
No 395
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=95.95 E-value=0.0095 Score=44.13 Aligned_cols=67 Identities=18% Similarity=0.343 Sum_probs=43.6
Q ss_pred hhHHHhHcCCCeEEEEEEC-----CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhh----hCCcCcCCEE
Q 017971 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLAS----KQEIDAFPTL 121 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~-----~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~----~~~i~~~Pt~ 121 (363)
+.+++++++++ ++| |.. |||++|++....+.+. + +.+-.+|.++++++.+ ..+...+|.+
T Consensus 9 ~~v~~~i~~~~-Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~-------g--i~~~~~dI~~~~~~~~~l~~~~g~~tvP~i 77 (109)
T 3ipz_A 9 DTLEKLVNSEK-VVL-FMKGTRDFPMCGFSNTVVQILKNL-------N--VPFEDVNILENEMLRQGLKEYSNWPTFPQL 77 (109)
T ss_dssp HHHHHHHTSSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT-------T--CCCEEEEGGGCHHHHHHHHHHHTCSSSCEE
T ss_pred HHHHHHHccCC-EEE-EEecCCCCCCChhHHHHHHHHHHc-------C--CCcEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 34556666654 333 444 5999999988877753 1 5567788877655433 3478899977
Q ss_pred EEEeCCEEE
Q 017971 122 KIFMHGIPT 130 (363)
Q Consensus 122 ~~~~~g~~~ 130 (363)
+ .+|+.+
T Consensus 78 f--i~g~~i 84 (109)
T 3ipz_A 78 Y--IGGEFF 84 (109)
T ss_dssp E--ETTEEE
T ss_pred E--ECCEEE
Confidence 4 477554
No 396
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=95.92 E-value=0.061 Score=45.04 Aligned_cols=69 Identities=10% Similarity=0.185 Sum_probs=46.9
Q ss_pred CCCCCcccccc--CCCCCeEEcChhhHHHhHcCCCeEEEEEE-CCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc
Q 017971 29 RGLSSEEETKF--KIDGKVIELDESNFDSAISSFDYILVDFY-APWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD 104 (363)
Q Consensus 29 ~~~~~~~~~~~--~~~~~v~~l~~~~f~~~l~~~~~~lv~fy-~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~ 104 (363)
.|..+|+.... .++....+++-++| .++.+++.|| +.||+.|......|.+...++++.+ +.+..|.++
T Consensus 28 vG~~APdF~~~a~l~d~~g~~vsLsd~-----~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g--~~vigiS~D 99 (219)
T 3tue_A 28 INSPAPSFEEVALMPNGSFKKISLSSY-----KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELN--CEVLACSID 99 (219)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEGGGG-----TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTT--EEEEEEESS
T ss_pred cCCcCCCCcccccccCCCCcEEehHHh-----CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCC--cEEEEeeCC
Confidence 34456665421 12333334444444 4578889999 7899999999999999999998765 666666654
No 397
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=95.91 E-value=0.061 Score=41.83 Aligned_cols=91 Identities=11% Similarity=0.041 Sum_probs=65.1
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccC------------------------chhHHhhcCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ------------------------FADFADTFEA 322 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~------------------------~~~~~~~~gi 322 (363)
.++++++.|+. ............|.++++++++ +.++.|+.++ ...+.+.||.
T Consensus 23 ~gk~vlv~F~a-~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWA-TWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEEC-TTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEc-CcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 34677776664 4566677788888888888754 8888877652 2345666772
Q ss_pred CCCCCCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 323 NKKSKLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 323 ~~~~~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.....|++++++++|+ .+...+....+.+..++..++.
T Consensus 102 -~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 102 -TVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp -CSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred -ccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 1267899999999986 4566777788888888887764
No 398
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.017 Score=43.69 Aligned_cols=68 Identities=18% Similarity=0.214 Sum_probs=44.0
Q ss_pred hhHHHhHcCCCeEEEEEEC----CCChhhhhHHHHHHHHHHHhhcCCCCeE---EEEEeCccchhhhh----hCCcCcCC
Q 017971 51 SNFDSAISSFDYILVDFYA----PWCGHCKRLAPQLDEAAPILAKLKEPIV---IAKVDADKYSRLAS----KQEIDAFP 119 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~----~~C~~C~~~~~~~~~~a~~~~~~~~~v~---~~~vd~~~~~~l~~----~~~i~~~P 119 (363)
+.+++++++++ ++|+-.+ |||++|++....+.+.. +. +..+|...++++.+ ..|...+|
T Consensus 7 ~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g---------v~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP 76 (121)
T 3gx8_A 7 KAIEDAIESAP-VVLFMKGTPEFPKCGFSRATIGLLGNQG---------VDPAKFAAYNVLEDPELREGIKEFSEWPTIP 76 (121)
T ss_dssp HHHHHHHHSCS-EEEEESBCSSSBCTTHHHHHHHHHHHHT---------BCGGGEEEEECTTCHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHhccCC-EEEEEeccCCCCCCccHHHHHHHHHHcC---------CCcceEEEEEecCCHHHHHHHHHHhCCCCCC
Confidence 34566676655 3333222 59999999988887642 43 66778877765433 34678899
Q ss_pred EEEEEeCCEEE
Q 017971 120 TLKIFMHGIPT 130 (363)
Q Consensus 120 t~~~~~~g~~~ 130 (363)
.++ .+|+.+
T Consensus 77 ~vf--I~g~~i 85 (121)
T 3gx8_A 77 QLY--VNKEFI 85 (121)
T ss_dssp EEE--ETTEEE
T ss_pred eEE--ECCEEE
Confidence 985 477654
No 399
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=95.81 E-value=0.013 Score=41.20 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=39.2
Q ss_pred EEEEECC----CChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc-----cchh----hhhhCCcC-----cCCEEEEEe
Q 017971 64 LVDFYAP----WCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD-----KYSR----LASKQEID-----AFPTLKIFM 125 (363)
Q Consensus 64 lv~fy~~----~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~-----~~~~----l~~~~~i~-----~~Pt~~~~~ 125 (363)
++.|+.+ ||++|++....+++. + +.+-.+|.+ .+++ +.+..|.. ++|++++ .
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-------g--i~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~ 71 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-------K--QPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-P 71 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-------T--CCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-T
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-------C--CCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-E
Confidence 4668889 999999887776652 2 556677777 5533 56667777 8999764 2
Q ss_pred CCEEE
Q 017971 126 HGIPT 130 (363)
Q Consensus 126 ~g~~~ 130 (363)
+|+.+
T Consensus 72 ~g~~i 76 (87)
T 1aba_A 72 DGSHI 76 (87)
T ss_dssp TSCEE
T ss_pred CCEEE
Confidence 55543
No 400
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.74 E-value=0.059 Score=41.95 Aligned_cols=86 Identities=12% Similarity=0.030 Sum_probs=66.7
Q ss_pred CcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEec---------------------------cCchhHHhhcCCC
Q 017971 271 RKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI---------------------------KQFADFADTFEAN 323 (363)
Q Consensus 271 ~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~---------------------------~~~~~~~~~~gi~ 323 (363)
+++++.|+. ............+.++++++ ++.++.|+. .....+.+.||+
T Consensus 31 k~vll~f~~-~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v- 107 (154)
T 3ia1_A 31 KPAVIVFWA-SWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV- 107 (154)
T ss_dssp SSEEEEEEC-TTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB-
T ss_pred CeEEEEEEc-ccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC-
Confidence 677777774 46667778888889888888 888888877 245667888888
Q ss_pred CCCCCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 324 KKSKLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 324 ~~~~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|++++++++|+ .+...+....+.+..++...+.
T Consensus 108 --~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 144 (154)
T 3ia1_A 108 --LGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGA 144 (154)
T ss_dssp --CSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTC
T ss_pred --CcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccC
Confidence 57899999999986 4556677788888888887664
No 401
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=95.71 E-value=0.074 Score=40.06 Aligned_cols=86 Identities=12% Similarity=0.028 Sum_probs=60.7
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEecc----------------------------CchhHHhh
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK----------------------------QFADFADT 319 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~----------------------------~~~~~~~~ 319 (363)
.++++++.|+ .............+.++++++++ +.++.++.. ....+.+.
T Consensus 21 ~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFW-ASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEEC-CTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 3466666665 44566677888888888888775 888777421 12357778
Q ss_pred cCCCCCCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhh
Q 017971 320 FEANKKSKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLT 358 (363)
Q Consensus 320 ~gi~~~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~ 358 (363)
||+ ...|++++++++|+. +...+....+.+..++..
T Consensus 100 ~~v---~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 100 YGV---RSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TTC---CSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred cCc---ccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 888 578999999999864 455666677777776654
No 402
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.64 E-value=0.092 Score=41.09 Aligned_cols=88 Identities=9% Similarity=0.008 Sum_probs=63.4
Q ss_pred CCcEEEEEEeCCChhhHHH-HHHHHHHHHHhCCC--cEEEEEecc----------------------------Cchh---
Q 017971 270 KRKIVLAIVEDETEEKSQK-LVTTLKAAASANRE--LVFCYVGIK----------------------------QFAD--- 315 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~-~~~~l~~~a~~~~~--~~f~~vd~~----------------------------~~~~--- 315 (363)
++++++.|+.. ....... ....|+++++++++ +.++.|+.. ....
T Consensus 30 gk~vlv~F~a~-~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 30 GKVVVVEVFQM-LCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TSEEEEEEECT-TCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCEEEEEEEcC-CCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 46777777654 5666666 57888888888875 777777641 1122
Q ss_pred ---HHhhcCCCCCCCCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 316 ---FADTFEANKKSKLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 316 ---~~~~~gi~~~~~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+.+.||+ ...|++++++++|+ .+...+....+++...+..+|+
T Consensus 109 ~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 109 IPSTMKKYRL---EGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SCHHHHHTTC---CSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhhHHHhccc---CccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 6777888 56899999999986 4455677778888888888875
No 403
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=95.63 E-value=0.049 Score=42.34 Aligned_cols=89 Identities=8% Similarity=-0.027 Sum_probs=62.8
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEec-----------------------cCchhHHhhcCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGI-----------------------KQFADFADTFEAN 323 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~-----------------------~~~~~~~~~~gi~ 323 (363)
.++++++.|+. ............++++++++++ +.++.++. +....+.+.||+
T Consensus 27 ~gk~~lv~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i- 104 (153)
T 2l5o_A 27 QGKVTLINFWF-PSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT- 104 (153)
T ss_dssp TTCEEEEEEEC-TTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC-
T ss_pred CCCEEEEEEEC-CCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC-
Confidence 34666666664 3555567777788888877664 66665542 223567888888
Q ss_pred CCCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 324 KKSKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 324 ~~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|++++++++|+. +...+....+++..++..+|+
T Consensus 105 --~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 105 --QVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp --CSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred --CccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 568999999999863 455666777888888888875
No 404
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=95.60 E-value=0.016 Score=43.64 Aligned_cols=67 Identities=16% Similarity=0.280 Sum_probs=44.2
Q ss_pred hhHHHhHcCCCeEEEEEEC-----CCChhhhhHHHHHHHHHHHhhcCCCCeE-EEEEeCccchhhhhh----CCcCcCCE
Q 017971 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIV-IAKVDADKYSRLASK----QEIDAFPT 120 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~-----~~C~~C~~~~~~~~~~a~~~~~~~~~v~-~~~vd~~~~~~l~~~----~~i~~~Pt 120 (363)
+..++++++++ ++| |.. |||++|++....+.+. + +. +-.+|.++++++.+. .+...+|+
T Consensus 11 ~~v~~~i~~~~-Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~-------g--v~~~~~vdV~~d~~~~~~l~~~tg~~tvP~ 79 (118)
T 2wem_A 11 EQLDALVKKDK-VVV-FLKGTPEQPQCGFSNAVVQILRLH-------G--VRDYAAYNVLDDPELRQGIKDYSNWPTIPQ 79 (118)
T ss_dssp HHHHHHHHHSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT-------T--CCCCEEEESSSCHHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCccHHHHHHHHHHHHc-------C--CCCCEEEEcCCCHHHHHHHHHHhCCCCcCe
Confidence 55667776654 333 444 5999999988777653 1 53 667787776655433 37788999
Q ss_pred EEEEeCCEEE
Q 017971 121 LKIFMHGIPT 130 (363)
Q Consensus 121 ~~~~~~g~~~ 130 (363)
++ .+|+.+
T Consensus 80 vf--I~g~~I 87 (118)
T 2wem_A 80 VY--LNGEFV 87 (118)
T ss_dssp EE--ETTEEE
T ss_pred EE--ECCEEE
Confidence 75 467654
No 405
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=95.59 E-value=0.096 Score=40.65 Aligned_cols=89 Identities=11% Similarity=0.099 Sum_probs=62.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCc-----------------------hhHHhhcCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF-----------------------ADFADTFEAN 323 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~-----------------------~~~~~~~gi~ 323 (363)
.++++++.|+ .............+.++++++++ +.++.++.+.. ..+.+.||+
T Consensus 27 ~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v- 104 (154)
T 3kcm_A 27 KGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGT- 104 (154)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTC-
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCC-
Confidence 4467777776 45666777888889999888876 78888777653 236777888
Q ss_pred CCCCCCeEEEEeCCCCe-eEEEEEE--eehhhhhHhhhhhc
Q 017971 324 KKSKLPKMVVWDGNENY-LTVSINV--LKTRVCFFMLTLLQ 361 (363)
Q Consensus 324 ~~~~~P~~vi~~~~~~y-~~~~~~~--~~~~~~~~~~~~~~ 361 (363)
...|.+++++++|+. +...+.. ....+..++..+++
T Consensus 105 --~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 105 --TGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp --CSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred --CCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 678999999999864 3344443 45577787777654
No 406
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.54 E-value=0.017 Score=41.30 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=38.4
Q ss_pred EEEEECCCChhh------hhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhCC--cCcCCEEEEEeCCEEE
Q 017971 64 LVDFYAPWCGHC------KRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQE--IDAFPTLKIFMHGIPT 130 (363)
Q Consensus 64 lv~fy~~~C~~C------~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~~--i~~~Pt~~~~~~g~~~ 130 (363)
++.|++++|++| ++....+++ .+ +.+-.+|.+.+++ +.+..| ...+|.++ .+|+.+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~-------~~--i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if--i~g~~i 71 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG-------KR--IQYQLVDISQDNALRDEMRTLAGNPKATPPQIV--NGNHYC 71 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH-------TT--CCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE--ETTEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH-------CC--CceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE--ECCEEE
Confidence 667899999999 565554442 22 6678889887644 444667 67999875 466544
No 407
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=95.54 E-value=0.013 Score=43.46 Aligned_cols=67 Identities=16% Similarity=0.269 Sum_probs=44.8
Q ss_pred hhHHHhHcCCCeEEEEEEC-----CCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhh----CCcCcCCEE
Q 017971 51 SNFDSAISSFDYILVDFYA-----PWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASK----QEIDAFPTL 121 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~-----~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~----~~i~~~Pt~ 121 (363)
+..++++++++ +|.|.. +||++|++....+.+. + +.+-.+|.+.++++.+. .|...+|.+
T Consensus 7 ~~v~~~i~~~~--Vvlf~kg~~~~~~Cp~C~~ak~~L~~~-------g--i~y~~~di~~d~~~~~~l~~~~g~~tvP~i 75 (111)
T 3zyw_A 7 LRLKKLTHAAP--CMLFMKGTPQEPRCGFSKQMVEILHKH-------N--IQFSSFDIFSDEEVRQGLKAYSSWPTYPQL 75 (111)
T ss_dssp HHHHHHHTSSS--EEEEESBCSSSBSSHHHHHHHHHHHHT-------T--CCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHhcCC--EEEEEecCCCCCcchhHHHHHHHHHHc-------C--CCeEEEECcCCHHHHHHHHHHHCCCCCCEE
Confidence 34555666543 344677 9999999988777642 1 55677888777655433 377889998
Q ss_pred EEEeCCEEE
Q 017971 122 KIFMHGIPT 130 (363)
Q Consensus 122 ~~~~~g~~~ 130 (363)
++ +|+.+
T Consensus 76 fi--~g~~i 82 (111)
T 3zyw_A 76 YV--SGELI 82 (111)
T ss_dssp EE--TTEEE
T ss_pred EE--CCEEE
Confidence 54 67544
No 408
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=95.51 E-value=0.028 Score=47.94 Aligned_cols=59 Identities=12% Similarity=0.215 Sum_probs=43.5
Q ss_pred CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccch---hhhhhCCcCcCCEEEEEeCCEEE
Q 017971 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS---RLASKQEIDAFPTLKIFMHGIPT 130 (363)
Q Consensus 61 ~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~---~l~~~~~i~~~Pt~~~~~~g~~~ 130 (363)
...++.|+.+||++|++....+++. + +.+-.+|.+.++ ++.+.++..++|+++ .+|+.+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-----~----i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~~i 230 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-----G----LSFEEIILGHDATIVSVRAVSGRTTVPQVF--IGGKHI 230 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-----T----CCCEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTEEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-----C----CceEEEECCCchHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 4567789999999999998877753 1 455667776554 377788999999985 466543
No 409
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=95.48 E-value=0.041 Score=42.73 Aligned_cols=88 Identities=11% Similarity=0.137 Sum_probs=60.9
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCch-----------------------hHHhhcCCCC
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA-----------------------DFADTFEANK 324 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~-----------------------~~~~~~gi~~ 324 (363)
++++++.|+ .............++++++++++ +.++.|+.+... .+.+.||+
T Consensus 30 gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 106 (152)
T 2lja_A 30 GKYIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI-- 106 (152)
T ss_dssp TSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC--
T ss_pred CCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc--
Confidence 456666655 33455556667777777777764 788888766532 57778888
Q ss_pred CCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 325 KSKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 325 ~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|++++++++|+. +...+....+++..++..+++
T Consensus 107 -~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 143 (152)
T 2lja_A 107 -NGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLG 143 (152)
T ss_dssp -CSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHT
T ss_pred -CCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhc
Confidence 578999999998863 334456667788888877664
No 410
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.47 E-value=0.12 Score=40.04 Aligned_cols=89 Identities=10% Similarity=0.028 Sum_probs=61.1
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCch----------------------hHHhhcCCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA----------------------DFADTFEANK 324 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~----------------------~~~~~~gi~~ 324 (363)
.++++++.|+ .............|.++++++++ +.++.++.+..+ .+.+.||+
T Consensus 27 ~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 103 (152)
T 3gl3_A 27 TGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGV-- 103 (152)
T ss_dssp TTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTC--
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCC--
Confidence 3466776666 44566677778888888887765 888888776433 45677888
Q ss_pred CCCCCeEEEEeCCCCee-EEEEEE--eehhhhhHhhhhhc
Q 017971 325 KSKLPKMVVWDGNENYL-TVSINV--LKTRVCFFMLTLLQ 361 (363)
Q Consensus 325 ~~~~P~~vi~~~~~~y~-~~~~~~--~~~~~~~~~~~~~~ 361 (363)
...|++++++++|+.- ...+.. ..+++..++...++
T Consensus 104 -~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 104 -KGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALG 142 (152)
T ss_dssp -CSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC
T ss_pred -CCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHc
Confidence 5789999999998643 333322 23577777776653
No 411
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.46 E-value=0.022 Score=42.30 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=38.3
Q ss_pred EEEEEECCCChhhh------hHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhC--------CcCcCCEEEEE
Q 017971 63 ILVDFYAPWCGHCK------RLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQ--------EIDAFPTLKIF 124 (363)
Q Consensus 63 ~lv~fy~~~C~~C~------~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~--------~i~~~Pt~~~~ 124 (363)
.++.|+.++|++|+ +....+++ .+ +.+-.+|.+.+++ +.+.+ +...+|.++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~-------~g--i~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf-- 77 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA-------NK--IEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF-- 77 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH-------TT--CCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE--
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH-------cC--CCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE--
Confidence 46778999999998 44444432 22 7788899987755 33444 667789875
Q ss_pred eCCEEE
Q 017971 125 MHGIPT 130 (363)
Q Consensus 125 ~~g~~~ 130 (363)
.+|+.+
T Consensus 78 i~g~~i 83 (111)
T 2ct6_A 78 NGDRYC 83 (111)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 466544
No 412
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=95.33 E-value=0.031 Score=44.13 Aligned_cols=102 Identities=6% Similarity=-0.006 Sum_probs=67.7
Q ss_pred ccCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CcEEEEEec-----------------------
Q 017971 256 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGI----------------------- 310 (363)
Q Consensus 256 ~~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~----------------------- 310 (363)
..++...+......++++++.|+ .............|.+++++++ ++.++.|+.
T Consensus 24 ~~~~g~~~~~~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (164)
T 2h30_A 24 KTADNRPASVYLKKDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPK 102 (164)
T ss_dssp EETTSSBGGGGCCTTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT
T ss_pred CCCCCCEeeHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCc
Confidence 33444433333344567777776 4456667777888888887743 355555432
Q ss_pred -----cCchhHHhhcCCCCCCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 311 -----KQFADFADTFEANKKSKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 311 -----~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
+....+.+.||+ ...|++++++++|+. +...+....+.+..++..+|+
T Consensus 103 ~~~~~d~~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 103 LPVVTDNGGTIAQNLNI---SVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp SCEEECTTCHHHHHTTC---CSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred ceEEEcCchHHHHHcCC---CccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 223457778888 578999999999863 455677788889998888764
No 413
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=95.20 E-value=0.013 Score=48.29 Aligned_cols=39 Identities=21% Similarity=0.497 Sum_probs=30.3
Q ss_pred CeEEEEEECCCChhhhhHHHHH---HHHHHHhhcCCCCeEEEEEe
Q 017971 61 DYILVDFYAPWCGHCKRLAPQL---DEAAPILAKLKEPIVIAKVD 102 (363)
Q Consensus 61 ~~~lv~fy~~~C~~C~~~~~~~---~~~a~~~~~~~~~v~~~~vd 102 (363)
++.+|.|++.||+||+++.|.+ .++.+.+.+ ++.|..++
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~---~v~~~~~~ 63 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE---GTKMTKYH 63 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT---TCCEEEEE
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCC---CcEEEEEe
Confidence 7899999999999999999986 677776643 24454444
No 414
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=95.15 E-value=0.12 Score=40.03 Aligned_cols=86 Identities=6% Similarity=0.142 Sum_probs=57.1
Q ss_pred CCcEEEEEEeCCChhh--HHHHHHHHHHHHHhC-C--CcEEEEEeccCch-------------------------hHHhh
Q 017971 270 KRKIVLAIVEDETEEK--SQKLVTTLKAAASAN-R--ELVFCYVGIKQFA-------------------------DFADT 319 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~--~~~~~~~l~~~a~~~-~--~~~f~~vd~~~~~-------------------------~~~~~ 319 (363)
++++++.|+.. .... .......|.++.+++ + ++.++.|+.+..+ .+.+.
T Consensus 33 gk~vll~F~a~-~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 33 QKSLLINFWAS-WNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TSEEEEEEECT-TCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCEEEEEEEeC-CCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 46676666654 4444 566677777777776 3 3777777665432 57778
Q ss_pred cCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 320 FEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 320 ~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
||+ ...|+++++|++|+.-... +..+.++..+..+|+
T Consensus 112 ~~v---~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSI---YKIPANILLSSDGKILAKN--LRGEELKKKIENIVE 148 (150)
T ss_dssp TTC---CSSSEEEEECTTSBEEEES--CCHHHHHHHHHHHHH
T ss_pred cCC---CccCeEEEECCCCEEEEcc--CCHHHHHHHHHHHHh
Confidence 888 5789999999999643333 255666776666653
No 415
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.10 E-value=0.11 Score=40.35 Aligned_cols=87 Identities=6% Similarity=0.034 Sum_probs=60.3
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccC-----------------------chhHHhhcCCCCCC
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKS 326 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~-----------------------~~~~~~~~gi~~~~ 326 (363)
++++++.|+. ............+++++++ .++.|+.++.++ ...+.+.+|+ .
T Consensus 42 gk~~ll~f~~-~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~ 116 (156)
T 1kng_A 42 GKVSLVNVWA-SWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV---Y 116 (156)
T ss_dssp TSCEEEEEEC-TTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC---C
T ss_pred CCEEEEEEEc-ccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc---C
Confidence 5677777764 4566677778888887766 447777776532 2356677887 5
Q ss_pred CCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 327 KLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 327 ~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
..|++++++++|+. +...+....+.+..++..+|+
T Consensus 117 ~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp SSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred ccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 78999999999864 345566666777777766653
No 416
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=95.08 E-value=0.14 Score=40.06 Aligned_cols=68 Identities=10% Similarity=0.172 Sum_probs=53.5
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CcEEEEEeccC-------------------chhHHhhcCCCCCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQ-------------------FADFADTFEANKKSK 327 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~-------------------~~~~~~~~gi~~~~~ 327 (363)
.++++++.|+ .............+++++++++ ++.++.++.+. ...+.+.||+ ..
T Consensus 40 ~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~ 115 (158)
T 3hdc_A 40 RGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGA---NR 115 (158)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTC---CS
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCC---CC
Confidence 3467777777 4466677788899999999987 38888888765 4568888998 57
Q ss_pred CCeEEEEeCCCCe
Q 017971 328 LPKMVVWDGNENY 340 (363)
Q Consensus 328 ~P~~vi~~~~~~y 340 (363)
.|++++++++|+.
T Consensus 116 ~P~~~lid~~G~i 128 (158)
T 3hdc_A 116 LPDTFIVDRKGII 128 (158)
T ss_dssp SSEEEEECTTSBE
T ss_pred cceEEEEcCCCCE
Confidence 8999999999863
No 417
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=94.88 E-value=0.051 Score=43.79 Aligned_cols=90 Identities=11% Similarity=0.184 Sum_probs=60.4
Q ss_pred HHHhhcCCCcc--cCChhhHHhhhcCCCcEEEEEEeCCChhhHHHHHH-HH--HHHHHhCC-CcEEEEEeccCchhHHhh
Q 017971 246 FIKQNFLPLSV--PINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVT-TL--KAAASANR-ELVFCYVGIKQFADFADT 319 (363)
Q Consensus 246 fi~~~~~p~~~--~lt~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~l--~~~a~~~~-~~~f~~vd~~~~~~~~~~ 319 (363)
++.+|....+. ..+.+.+......++|+++-|..+ -....+.+.. .+ .++++... ++.++.||.++.+.+.+.
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~-WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~ 91 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYS-TCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNI 91 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECT-TCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccc-hhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHH
Confidence 45555444443 334577777777788998888743 4555555444 11 34444443 388999999987777766
Q ss_pred c--------CCCCCCCCCeEEEEeCCCC
Q 017971 320 F--------EANKKSKLPKMVVWDGNEN 339 (363)
Q Consensus 320 ~--------gi~~~~~~P~~vi~~~~~~ 339 (363)
+ |+ ...|++++++++|+
T Consensus 92 y~~~~q~~~gv---~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 92 YMTVCQIILGR---GGWPLNIIMTPGKK 116 (173)
T ss_dssp HHHHHHHHHSC---CCSSEEEEECTTSC
T ss_pred HHHHHHHHcCC---CCCcceeeECCCCC
Confidence 6 77 67999999999885
No 418
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=94.88 E-value=0.06 Score=41.43 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=53.7
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCchh-------------------------HHhhcC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFAD-------------------------FADTFE 321 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~-------------------------~~~~~g 321 (363)
.++++++.|+.. ...........+.++++++++ +.++.|+.+..+. +.+.||
T Consensus 30 ~gk~vll~f~~~-~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDS-QCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECG-GGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECC-CCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 346676666643 344455566677777776654 8888887765444 777788
Q ss_pred CCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhh
Q 017971 322 ANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTL 359 (363)
Q Consensus 322 i~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~ 359 (363)
+ ...|++++++++|+..... .-...+..++..+
T Consensus 109 i---~~~P~~~lid~~G~i~~~~--~g~~~~~~~l~~l 141 (148)
T 3hcz_A 109 I---YATPVLYVLDKNKVIIAKR--IGYENLDDFLVQY 141 (148)
T ss_dssp C---CSSCEEEEECTTCBEEEES--CCGGGHHHHHHHH
T ss_pred c---CCCCEEEEECCCCcEEEec--CCHHHHHHHHHHH
Confidence 7 5789999999998643221 1124555555444
No 419
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=94.84 E-value=0.014 Score=46.59 Aligned_cols=98 Identities=10% Similarity=0.082 Sum_probs=64.6
Q ss_pred hHHhhhcCCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchh-HHhhcCCCCCCCCCeEEEEeCCCC
Q 017971 262 TLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFAD-FADTFEANKKSKLPKMVVWDGNEN 339 (363)
Q Consensus 262 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~-~~~~~gi~~~~~~P~~vi~~~~~~ 339 (363)
.+......++++++.|+. .-....+.+...+.+++..+.. +.|+.||.+..+. ....+++ .....|++++++++|+
T Consensus 38 ~~~~~~~~~k~vlv~F~a-~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~-~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIHK-SWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSP-DGGYIPRILFLDPSGK 115 (164)
T ss_dssp HHHHHHHHTCCEEEEEEC-TTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCT-TCSCSSEEEEECTTSC
T ss_pred HHHHHHhcCCeEEEEEEC-CCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcc-cCCcCCeEEEECCCCC
Confidence 344444556788887774 4667777778888776655443 7778888876655 6778888 3456899999988874
Q ss_pred e-eEEEE----------EEeehhhhhHhhhhhc
Q 017971 340 Y-LTVSI----------NVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 340 y-~~~~~----------~~~~~~~~~~~~~~~~ 361 (363)
- ....+ ....+++...+..+|+
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 2 22233 2456667776666553
No 420
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=94.83 E-value=0.13 Score=40.72 Aligned_cols=87 Identities=8% Similarity=-0.023 Sum_probs=59.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEec-----------------------cCchhHHhhcCCCCC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI-----------------------KQFADFADTFEANKK 325 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~-----------------------~~~~~~~~~~gi~~~ 325 (363)
.++++++.|+. ............+.+++++ ++.++.|+. +....+.+.||+
T Consensus 50 ~gk~vll~F~a-~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--- 123 (168)
T 2b1k_A 50 QGKPVLLNVWA-TWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGV--- 123 (168)
T ss_dssp CSSCEEEEEEC-TTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTC---
T ss_pred CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCc---
Confidence 45677777764 3556666777777777765 566666652 223457777888
Q ss_pred CCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 326 SKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 326 ~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...|+.++++++|+. +...+....+.+..++..+|+
T Consensus 124 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 124 YGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp CSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred cccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 568999999999864 455666777788887777664
No 421
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=94.82 E-value=0.18 Score=39.34 Aligned_cols=88 Identities=13% Similarity=0.031 Sum_probs=63.2
Q ss_pred CCcEEEEEEeCCChhhHHHH-HHHHHHHHHhCCC--cEEEEEecc----------------------------Cch----
Q 017971 270 KRKIVLAIVEDETEEKSQKL-VTTLKAAASANRE--LVFCYVGIK----------------------------QFA---- 314 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~-~~~l~~~a~~~~~--~~f~~vd~~----------------------------~~~---- 314 (363)
++++++.|+. ......... ...|.++++++++ +.++.|+.+ ...
T Consensus 28 gk~vlv~f~a-~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 28 GKVIVIEAFQ-MLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TSEEEEEEEC-TTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCEEEEEEEC-CcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 4677776664 355666664 7888888888873 777777642 111
Q ss_pred -hHHhhcCCCCCCCCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 315 -DFADTFEANKKSKLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 315 -~~~~~~gi~~~~~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.+.+.||+ ...|++++++++|+ .+...+....+++...+..+|.
T Consensus 107 ~~~~~~~~v---~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 107 PRTMAAYQM---RGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp CHHHHHTTC---CSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCC---CCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 46778888 57899999999986 3455677778888888888875
No 422
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=94.57 E-value=0.27 Score=39.60 Aligned_cols=91 Identities=9% Similarity=0.037 Sum_probs=62.8
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC--CcEEEEEeccCc-----hhHHhhcCCC------C------------
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANR--ELVFCYVGIKQF-----ADFADTFEAN------K------------ 324 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~--~~~f~~vd~~~~-----~~~~~~~gi~------~------------ 324 (363)
++++++.|+. ............|+++.++++ ++.++.|+.+.. .++++.+++. +
T Consensus 60 gk~vll~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 60 GKTLLVNLWA-TWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCEEEEEEEe-CCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 4667777664 456667777888888888776 477777766532 5677777761 0
Q ss_pred --CCCCCeEEEEeCCCCe-eEEEEEEe--ehhhhhHhhhhhc
Q 017971 325 --KSKLPKMVVWDGNENY-LTVSINVL--KTRVCFFMLTLLQ 361 (363)
Q Consensus 325 --~~~~P~~vi~~~~~~y-~~~~~~~~--~~~~~~~~~~~~~ 361 (363)
....|++++++++|+. +...+... ..++..++..+|.
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 0268999999999864 34445443 5788888888775
No 423
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=94.56 E-value=0.12 Score=41.61 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=62.4
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--c------EEEEEeccC-ch----hHHhhcCCC------------
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--L------VFCYVGIKQ-FA----DFADTFEAN------------ 323 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~------~f~~vd~~~-~~----~~~~~~gi~------------ 323 (363)
.++++++.|+. ............|+++++++++ + .|+.|+.+. .+ ++++.+++.
T Consensus 58 ~gk~vlv~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWG-QWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEEC-CcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 34677777764 4566677777788887776653 6 898888776 33 344443431
Q ss_pred ------CCCCCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 324 ------KKSKLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 324 ------~~~~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.....|..++++++|+. +...+....+.+..++..+|+
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 12568999999999864 455677788889999888875
No 424
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=94.53 E-value=0.11 Score=34.97 Aligned_cols=70 Identities=16% Similarity=0.049 Sum_probs=50.2
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEE-eehhhh
Q 017971 276 AIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINV-LKTRVC 353 (363)
Q Consensus 276 ~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~-~~~~~~ 353 (363)
.|+.+ .....+.....+++++.++.+ +.+..+| ..++++.+|+ ...|++++ +|+.... |.. ..++++
T Consensus 5 ~f~a~-wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v---~~~Pt~~~---~G~~~~~-G~~~~~~~l~ 73 (77)
T 1ilo_A 5 QIYGT-GCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGL---TALPGLAV---DGELKIM-GRVASKEEIK 73 (77)
T ss_dssp EEECS-SSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTC---SSSSCEEE---TTEEEEC-SSCCCHHHHH
T ss_pred EEEcC-CChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCC---CcCCEEEE---CCEEEEc-CCCCCHHHHH
Confidence 34433 556667788888999998875 8899998 5678899999 67899998 5554332 555 566666
Q ss_pred hHh
Q 017971 354 FFM 356 (363)
Q Consensus 354 ~~~ 356 (363)
.++
T Consensus 74 ~~l 76 (77)
T 1ilo_A 74 KIL 76 (77)
T ss_dssp HHC
T ss_pred HHh
Confidence 654
No 425
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=94.15 E-value=0.21 Score=40.62 Aligned_cols=86 Identities=14% Similarity=0.185 Sum_probs=58.2
Q ss_pred cEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEecc-----------------------------CchhHHhhc
Q 017971 272 KIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIK-----------------------------QFADFADTF 320 (363)
Q Consensus 272 ~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~-----------------------------~~~~~~~~~ 320 (363)
++++.|+ .............|.++.+++++ +.++.|+.+ ....+.+.|
T Consensus 48 ~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 48 ATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp EEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred eEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 3555554 34555666667777777776653 777777652 223567777
Q ss_pred CCCCCCCCCeEEEEeCCCCeeEE----------EEEEeehhhhhHhhhhhc
Q 017971 321 EANKKSKLPKMVVWDGNENYLTV----------SINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 321 gi~~~~~~P~~vi~~~~~~y~~~----------~~~~~~~~~~~~~~~~~~ 361 (363)
|+ ...|++++++++|+.... .+....+++...+..+|+
T Consensus 127 ~v---~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 127 DA---ACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp TC---CEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred CC---CCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 77 567999999999864433 455677888888888774
No 426
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=94.14 E-value=0.078 Score=42.33 Aligned_cols=91 Identities=14% Similarity=0.130 Sum_probs=59.7
Q ss_pred hcCCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhCC-CcEEEEEeccCchhH--------------------------
Q 017971 267 KDDKRKIVLAIVEDETEEKSQKLVTTL---KAAASANR-ELVFCYVGIKQFADF-------------------------- 316 (363)
Q Consensus 267 ~~~~~~~~i~~~~~~~~~~~~~~~~~l---~~~a~~~~-~~~f~~vd~~~~~~~-------------------------- 316 (363)
...++++++.|..+ -....+.+...+ ..+.+.++ ++.++.+|.++.+..
T Consensus 44 ~~~gk~vlv~F~A~-WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (172)
T 3f9u_A 44 RQHNKPVMLDFTGY-GCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQ 122 (172)
T ss_dssp HHTTCCEEEEEECT-TCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred HHcCCeEEEEEECC-CCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHH
Confidence 35677888877754 455555542222 33333333 488999998754433
Q ss_pred HhhcCCCCCCCCCeEEEEeCCCC-eeEEEEEEe-ehhhhhHhhhhhc
Q 017971 317 ADTFEANKKSKLPKMVVWDGNEN-YLTVSINVL-KTRVCFFMLTLLQ 361 (363)
Q Consensus 317 ~~~~gi~~~~~~P~~vi~~~~~~-y~~~~~~~~-~~~~~~~~~~~~~ 361 (363)
.+.+|+ ...|++++++++|+ .....|... .+.+..++...|+
T Consensus 123 ~~~~~v---~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 123 RVKFGA---NAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp HHHHSC---CCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred HHHcCC---CCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 678888 67999999999884 344457776 7788888777653
No 427
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.05 E-value=0.042 Score=47.43 Aligned_cols=81 Identities=12% Similarity=0.121 Sum_probs=52.2
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCc------------------cchhhhhhCCcCcC--
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDAD------------------KYSRLASKQEIDAF-- 118 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~------------------~~~~l~~~~~i~~~-- 118 (363)
+....+..|++++|++|.+....+.+.+.... +....++.+ ..+.+.+++|..++
T Consensus 41 ~~~~~VelyTs~gCp~C~~Ak~lL~~~~~~~~-----vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyT 115 (270)
T 2axo_A 41 AVKGVVELFTSQGCASCPPADEALRKMIQKGD-----VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYT 115 (270)
T ss_dssp CCCCEEEEEECTTCTTCHHHHHHHHHHHHHTS-----SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCS
T ss_pred CCCcEEEEEeCCCCCChHHHHHHHHHhhccCC-----eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccC
Confidence 33467778999999999999999998876421 422222221 12347788999988
Q ss_pred CEEEEEeCCEEEeecCCCCHHHHHHHHHhh
Q 017971 119 PTLKIFMHGIPTEYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 119 Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~ 148 (363)
|++++ +|+.. . |..+.+.|.+-+.+.
T Consensus 116 PqI~I--ng~~~-v-~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 116 PQAIL--NGRDH-V-KGADVRGIYDRLDAF 141 (270)
T ss_dssp SEEEE--TTTEE-E-ETTCHHHHHHHHHHH
T ss_pred CEEEE--CCEEe-e-cCCCHHHHHHHHHHh
Confidence 99776 55521 1 223466777766543
No 428
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=93.95 E-value=0.34 Score=37.13 Aligned_cols=68 Identities=6% Similarity=0.136 Sum_probs=49.9
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CcEEEEEeccC------------------------chhHHhhcC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQ------------------------FADFADTFE 321 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~------------------------~~~~~~~~g 321 (363)
.++++++.|+. ............|++++++++ ++.++.|+.+. ...+.+.||
T Consensus 27 ~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSA-SWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN 105 (146)
T ss_dssp TTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEc-cCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC
Confidence 34667666664 466677788888888888876 47777777654 235778888
Q ss_pred CCCCCCCCeEEEEe-CCCCe
Q 017971 322 ANKKSKLPKMVVWD-GNENY 340 (363)
Q Consensus 322 i~~~~~~P~~vi~~-~~~~y 340 (363)
+ ...|++++++ ++|+.
T Consensus 106 v---~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 106 V---ESIPTLIGVDADSGDV 122 (146)
T ss_dssp C---CSSSEEEEEETTTCCE
T ss_pred C---CCCCEEEEEECCCCeE
Confidence 8 5789999999 78763
No 429
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=93.88 E-value=0.36 Score=36.88 Aligned_cols=68 Identities=10% Similarity=0.159 Sum_probs=50.1
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CcEEEEEeccC------------------------chhHHhhcC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQ------------------------FADFADTFE 321 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~------------------------~~~~~~~~g 321 (363)
.++++++.|+. .-..........|.+++++++ ++.++.|+.+. ...+.+.||
T Consensus 27 ~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSA-SWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD 105 (144)
T ss_dssp TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC
Confidence 34677766664 466677788888888888876 47777777654 245778888
Q ss_pred CCCCCCCCeEEEEe-CCCCe
Q 017971 322 ANKKSKLPKMVVWD-GNENY 340 (363)
Q Consensus 322 i~~~~~~P~~vi~~-~~~~y 340 (363)
+ ...|++++++ ++|+.
T Consensus 106 v---~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 106 V---KSIPTLVGVEADSGNI 122 (144)
T ss_dssp C---CSSSEEEEEETTTCCE
T ss_pred C---CCCCEEEEEECCCCcE
Confidence 8 5789999999 78864
No 430
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=93.87 E-value=0.31 Score=39.29 Aligned_cols=87 Identities=14% Similarity=0.150 Sum_probs=57.7
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC-cEEEEEecc-----------------------------CchhHHhh
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIK-----------------------------QFADFADT 319 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~-----------------------------~~~~~~~~ 319 (363)
++++++.|+. ............|+++++++++ +.++.|+.+ ....+.+.
T Consensus 33 gk~vlv~F~a-~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 33 EPLLAVVFMC-NHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp SSEEEEEEEC-SSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCEEEEEEEC-CCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 3566666653 3455555666777777777776 777777652 22346677
Q ss_pred cCCCCCCCCCeEEEEeCCCCeeEEEEEE----------eehhhhhHhhhhhc
Q 017971 320 FEANKKSKLPKMVVWDGNENYLTVSINV----------LKTRVCFFMLTLLQ 361 (363)
Q Consensus 320 ~gi~~~~~~P~~vi~~~~~~y~~~~~~~----------~~~~~~~~~~~~~~ 361 (363)
||+ ...|++++++++|+.... +.+ ..+++...+..+|+
T Consensus 112 ~~v---~~~P~~~lid~~G~i~~~-g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 112 YRA---LRTPEVFLFDERRLLRYH-GRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp TTC---CEESEEEEECTTCBEEEE-ECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cCC---CCCCeEEEECCCCcEEEE-EecCCccccccccCHHHHHHHHHHHHc
Confidence 777 567999999999975444 332 46778887777764
No 431
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=93.79 E-value=0.36 Score=36.80 Aligned_cols=68 Identities=7% Similarity=0.180 Sum_probs=49.5
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CcEEEEEeccC------------------------chhHHhhcC
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQ------------------------FADFADTFE 321 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~------------------------~~~~~~~~g 321 (363)
.++++++.|+. ............|.+++++++ ++.++.++.+. ...+.+.||
T Consensus 27 ~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSA-SWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp TTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEEEEC-cCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 34667666664 466667788888888888776 47777776654 235777888
Q ss_pred CCCCCCCCeEEEEe-CCCCe
Q 017971 322 ANKKSKLPKMVVWD-GNENY 340 (363)
Q Consensus 322 i~~~~~~P~~vi~~-~~~~y 340 (363)
+ ...|++++++ ++|+.
T Consensus 106 v---~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 106 V---ESIPTLITINADTGAI 122 (144)
T ss_dssp C---CSSSEEEEEETTTCCE
T ss_pred C---CCCCEEEEEECCCCeE
Confidence 8 5789999999 78764
No 432
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=93.79 E-value=0.39 Score=37.95 Aligned_cols=68 Identities=3% Similarity=0.120 Sum_probs=50.3
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCC---CcEEEEEeccCc------------------------hhHHhhcCC
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANR---ELVFCYVGIKQF------------------------ADFADTFEA 322 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~---~~~f~~vd~~~~------------------------~~~~~~~gi 322 (363)
++++++.|+ ..-..........|.+++++++ ++.++.|+.+.. ..+.+.||+
T Consensus 48 gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 48 GKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 467776666 4456677888888888888765 377777765543 567888888
Q ss_pred CCCCCCCeEEEEeCC-CCee
Q 017971 323 NKKSKLPKMVVWDGN-ENYL 341 (363)
Q Consensus 323 ~~~~~~P~~vi~~~~-~~y~ 341 (363)
...|++++++++ |+.-
T Consensus 127 ---~~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 127 ---ESIPTLIGLNADTGDTV 143 (165)
T ss_dssp ---CSSSEEEEEETTTCCEE
T ss_pred ---CCCCEEEEEeCCCCEEE
Confidence 678999999997 8643
No 433
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=93.78 E-value=0.36 Score=38.60 Aligned_cols=86 Identities=10% Similarity=-0.032 Sum_probs=55.5
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEecc-----------------------CchhHHhhcCCCCCC
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-----------------------QFADFADTFEANKKS 326 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~-----------------------~~~~~~~~~gi~~~~ 326 (363)
++++++.|+. ............|++++++ ++.++.|+.+ ....+.+.||+ .
T Consensus 58 gk~vll~F~a-~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~ 131 (176)
T 3kh7_A 58 GKPALVNVWG-TWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGV---Y 131 (176)
T ss_dssp SSCEEEEEEC-TTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTC---C
T ss_pred CCEEEEEEEC-CcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCC---C
Confidence 4566666663 3555566666777776665 5555555521 12346667777 5
Q ss_pred CCCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 327 KLPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 327 ~~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
..|+.++++++|+. +...+....+.+...+..+|+
T Consensus 132 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp SSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred CCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 68999999999863 455566677777777777664
No 434
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=93.08 E-value=0.13 Score=38.51 Aligned_cols=70 Identities=13% Similarity=0.163 Sum_probs=44.1
Q ss_pred hhhHHHhHcCCCeEEEEE---ECCCChhhhhHHHHHHHHHHHhhcCCCCe-EEEEEeCccchhhhhh----CCcCcCCEE
Q 017971 50 ESNFDSAISSFDYILVDF---YAPWCGHCKRLAPQLDEAAPILAKLKEPI-VIAKVDADKYSRLASK----QEIDAFPTL 121 (363)
Q Consensus 50 ~~~f~~~l~~~~~~lv~f---y~~~C~~C~~~~~~~~~~a~~~~~~~~~v-~~~~vd~~~~~~l~~~----~~i~~~Pt~ 121 (363)
.+..++.+++++.++-.= ..|.|++|++....+.+. + + .+..+|...++++.+. -+-+.+|.+
T Consensus 10 ~e~i~~~i~~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~-------g--v~~~~~~~v~~~~~~r~~l~~~sg~~TvPqI 80 (118)
T 2wul_A 10 AEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLH-------G--VRDYAAYNVLDDPELRQGIKDYSNWPTIPQV 80 (118)
T ss_dssp HHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------T--CCSCEEEETTSCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHHHHh-------C--CcCeEeecccCCHHHHHHHHHhccCCCCCeE
Confidence 456778887765433221 136899998887666432 1 3 3667788877665443 366788987
Q ss_pred EEEeCCEEE
Q 017971 122 KIFMHGIPT 130 (363)
Q Consensus 122 ~~~~~g~~~ 130 (363)
+ .+|+.+
T Consensus 81 F--I~g~~I 87 (118)
T 2wul_A 81 Y--LNGEFV 87 (118)
T ss_dssp E--ETTEEE
T ss_pred e--ECCEEE
Confidence 5 466554
No 435
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=93.07 E-value=0.15 Score=41.46 Aligned_cols=41 Identities=10% Similarity=0.250 Sum_probs=31.9
Q ss_pred CCeEEEEEECCCChhhhhHHHHH-HHHHHHhhcCCCCeEEEEEeC
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQL-DEAAPILAKLKEPIVIAKVDA 103 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~-~~~a~~~~~~~~~v~~~~vd~ 103 (363)
.++.+|.|++.+|++|..+.+.+ .++.+.+.. .+.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~---~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD---IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT---TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC---ceEEEEEec
Confidence 45788999999999999999999 888876543 366655554
No 436
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=92.71 E-value=0.38 Score=37.34 Aligned_cols=67 Identities=7% Similarity=0.173 Sum_probs=48.3
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCchh-----------------------HHhhcCCCC
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFAD-----------------------FADTFEANK 324 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~~~-----------------------~~~~~gi~~ 324 (363)
++++++.|+.. ...........|+++++++++ +.++.|+.+.... +.+.||+
T Consensus 35 gk~vll~F~a~-wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v-- 111 (152)
T 2lrt_A 35 GKVVLIDFTVY-NNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV-- 111 (152)
T ss_dssp GSEEEEEEECT-TCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC--
T ss_pred CCEEEEEEEcC-CChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc--
Confidence 46777777753 566667777778888777654 7888887765332 6677888
Q ss_pred CCCCCeEEEEeCCCCe
Q 017971 325 KSKLPKMVVWDGNENY 340 (363)
Q Consensus 325 ~~~~P~~vi~~~~~~y 340 (363)
...|++++++++|+.
T Consensus 112 -~~~P~~~lid~~G~i 126 (152)
T 2lrt_A 112 -TNLPSVFLVNRNNEL 126 (152)
T ss_dssp -CSCSEEEEEETTTEE
T ss_pred -ccCceEEEECCCCeE
Confidence 568999999999863
No 437
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=92.23 E-value=0.59 Score=38.85 Aligned_cols=85 Identities=12% Similarity=0.138 Sum_probs=55.0
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEecc-----------------------------CchhHHhhcC
Q 017971 273 IVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIK-----------------------------QFADFADTFE 321 (363)
Q Consensus 273 ~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~-----------------------------~~~~~~~~~g 321 (363)
+++.|+. ............|+++++++++ +.++.|+.+ ....+.+.||
T Consensus 62 vll~F~a-~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 140 (218)
T 3u5r_E 62 LLVAFIS-NRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYG 140 (218)
T ss_dssp EEEEECC-SSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHT
T ss_pred EEEEEEC-CCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcC
Confidence 4444443 4455556666777777776654 677766662 2345777888
Q ss_pred CCCCCCCCeEEEEeCCCCeeEE----------EEEEeehhhhhHhhhhhc
Q 017971 322 ANKKSKLPKMVVWDGNENYLTV----------SINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 322 i~~~~~~P~~vi~~~~~~y~~~----------~~~~~~~~~~~~~~~~~~ 361 (363)
+ ...|.++++|++|+.-.. .+....+.++..+..+|.
T Consensus 141 v---~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 141 A---ACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp C---CEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred C---CCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 8 567999999999975422 123456778888777764
No 438
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=91.99 E-value=0.41 Score=33.50 Aligned_cols=73 Identities=14% Similarity=0.106 Sum_probs=52.4
Q ss_pred EEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHh
Q 017971 277 IVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFM 356 (363)
Q Consensus 277 ~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~ 356 (363)
+|........+.....|.+++..+ |..+|.++.+.+...+|+ . .|++++ .+|+.-. +....++++.++
T Consensus 5 ~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~---~-vPtl~~--~~G~~v~--g~~~~~~L~~~l 72 (87)
T 1ttz_A 5 LYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDAALESAYGL---R-VPVLRD--PMGRELD--WPFDAPRLRAWL 72 (87)
T ss_dssp EEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTT---T-CSEEEC--TTCCEEE--SCCCHHHHHHHH
T ss_pred EEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCC---C-cCeEEE--ECCEEEe--CCCCHHHHHHHH
Confidence 344556777777777777665433 788999988899999998 4 899887 5565432 566778888888
Q ss_pred hhhhc
Q 017971 357 LTLLQ 361 (363)
Q Consensus 357 ~~~~~ 361 (363)
...++
T Consensus 73 ~~~~~ 77 (87)
T 1ttz_A 73 DAAPH 77 (87)
T ss_dssp HTCC-
T ss_pred HHHHH
Confidence 77654
No 439
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=91.95 E-value=0.61 Score=35.37 Aligned_cols=85 Identities=9% Similarity=0.103 Sum_probs=51.6
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHH---HHHhCC--CcEEEEEeccCchh----H--------------------Hhhc
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKA---AASANR--ELVFCYVGIKQFAD----F--------------------ADTF 320 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~---~a~~~~--~~~f~~vd~~~~~~----~--------------------~~~~ 320 (363)
++++++.|+ .............+.+ +.++++ ++.++.++.+..+. + .+.|
T Consensus 27 gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 27 AQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 456666665 3345555555555544 555443 37777776653222 2 2356
Q ss_pred CCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 321 EANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 321 gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
|+ ...|++++++++|+... +.+..+.++.++...+
T Consensus 106 ~v---~~~P~~~lid~~G~i~~--~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 106 DI---RATPTIYLLDGRKRVIL--KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CC---CSSSEEEEECTTCBEEE--CSCCHHHHHHHHHC--
T ss_pred CC---CCCCeEEEECCCCCEEe--cCCCHHHHHHHHHHHc
Confidence 66 57899999999997644 4566777877776543
No 440
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=91.92 E-value=0.47 Score=35.48 Aligned_cols=62 Identities=11% Similarity=0.046 Sum_probs=37.6
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchh----hhhhC--------CcCcCCEEEEEeCCEEE
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR----LASKQ--------EIDAFPTLKIFMHGIPT 130 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~----l~~~~--------~i~~~Pt~~~~~~g~~~ 130 (363)
++.|+++.|+.|+- ...=.++...|+..+ |.|-.+|.+.+++ +.++. |....|.|+ .+|..+
T Consensus 2 V~vYtt~~c~~c~~-kk~c~~aK~lL~~kg--V~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIF--i~~~~i 75 (121)
T 1u6t_A 2 IRVYIASSSGSTAI-KKKQQDVLGFLEANK--IGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIF--NESQYR 75 (121)
T ss_dssp EEEEECTTCSCHHH-HHHHHHHHHHHHHTT--CCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEE--ETTEEE
T ss_pred EEEEecCCCCCccc-hHHHHHHHHHHHHCC--CceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEE--ECCEEE
Confidence 56788999999931 111122233343333 8899999986644 44455 667788766 455443
No 441
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=91.51 E-value=0.56 Score=42.32 Aligned_cols=88 Identities=9% Similarity=-0.027 Sum_probs=63.9
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccC---------------------------chhHHhhc
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ---------------------------FADFADTF 320 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~---------------------------~~~~~~~~ 320 (363)
++++++.|+. ............|+++++++++ +.++.|+.+. ...+.+.|
T Consensus 82 GK~vLl~F~a-twC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 82 GKVVLIDFWA-YSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCEEEEEEEC-CCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 4677777764 4666777888888888888764 8888876532 13466777
Q ss_pred CCCCCCCCCeEEEEeCCCC-eeEEEEEEeehhhhhHhhhhhc
Q 017971 321 EANKKSKLPKMVVWDGNEN-YLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 321 gi~~~~~~P~~vi~~~~~~-y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
++ ...|++++++++|+ .+...+....+.++.++..+|.
T Consensus 161 gV---~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 161 RN---RYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TC---CEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred CC---CccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 77 56899999999986 3445566677888888887764
No 442
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=91.48 E-value=1.3 Score=33.57 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=50.2
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHH---HHHhCC--CcEEEEEeccCchh------------------------HHhhc
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKA---AASANR--ELVFCYVGIKQFAD------------------------FADTF 320 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~---~a~~~~--~~~f~~vd~~~~~~------------------------~~~~~ 320 (363)
++++++.|+ .............|++ +.++++ ++.++.|+.+.... +.+.|
T Consensus 31 gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 31 AEYTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 356666665 4455556666677777 666553 37777776654311 34556
Q ss_pred CCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHh
Q 017971 321 EANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFM 356 (363)
Q Consensus 321 gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~ 356 (363)
++ ...|++++++++|+.-... ...+.++.|+
T Consensus 110 ~v---~~~P~~~lid~~G~i~~~~--~~~~~l~~~l 140 (142)
T 3eur_A 110 DL---RAIPTLYLLDKNKTVLLKD--ATLQKVEQYL 140 (142)
T ss_dssp CC---TTCSEEEEECTTCBEEEEE--ECHHHHHHHH
T ss_pred CC---CcCCeEEEECCCCcEEecC--CCHHHHHHHH
Confidence 66 5689999999999754332 3456666665
No 443
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=90.92 E-value=0.57 Score=34.23 Aligned_cols=75 Identities=8% Similarity=0.179 Sum_probs=54.6
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhh
Q 017971 275 LAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCF 354 (363)
Q Consensus 275 i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~ 354 (363)
+.+|........+.....|.+++.++. +.|..+|.++.+.+...+|+ . .|.++++.. |+.. ..+....++++.
T Consensus 32 vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv---~-VP~l~~~~d-G~~v-~~g~~~~~~L~~ 104 (107)
T 2fgx_A 32 LVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYND---R-VPVLFAVNE-DKEL-CHYFLDSDVIGA 104 (107)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTT---S-CSEEEETTT-TEEE-ECSSCCCHHHHH
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCC---C-CceEEEEEC-CEEE-EecCCCHHHHHH
Confidence 344555678888999999999988875 89999999988889999988 3 899876643 3322 234455666665
Q ss_pred Hh
Q 017971 355 FM 356 (363)
Q Consensus 355 ~~ 356 (363)
++
T Consensus 105 ~L 106 (107)
T 2fgx_A 105 YL 106 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 444
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=90.87 E-value=0.2 Score=43.22 Aligned_cols=28 Identities=29% Similarity=0.476 Sum_probs=24.0
Q ss_pred CCeEEEEEECCCChhhhhHHHHHHHHHH
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQLDEAAP 87 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~~~~a~ 87 (363)
++..++.|+.|.|++|+++.+++.+..+
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK 174 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh
Confidence 4578999999999999999999986543
No 445
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=89.85 E-value=0.47 Score=39.21 Aligned_cols=45 Identities=20% Similarity=0.141 Sum_probs=36.8
Q ss_pred cchhhhhhCCcCcCCEEEEEeCCEEE-eecCCCCHHHHHHHHHhhc
Q 017971 105 KYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 105 ~~~~l~~~~~i~~~Pt~~~~~~g~~~-~y~g~~~~~~i~~~i~~~~ 149 (363)
++...++++||.++|+++++.+|+.. .+.|..+.+.+.+.+.+..
T Consensus 164 ~~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 164 AGFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 34566788999999999999899864 4789999999999887654
No 446
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=89.64 E-value=0.99 Score=35.31 Aligned_cols=90 Identities=10% Similarity=0.081 Sum_probs=55.1
Q ss_pred hhcCCCcEEEEEEeCCChhhHHHHHHHH---HHHHHhC-CCcEEEEEeccC--chhHHhhcCCCCCCCCCeEEEEeCC-C
Q 017971 266 LKDDKRKIVLAIVEDETEEKSQKLVTTL---KAAASAN-RELVFCYVGIKQ--FADFADTFEANKKSKLPKMVVWDGN-E 338 (363)
Q Consensus 266 l~~~~~~~~i~~~~~~~~~~~~~~~~~l---~~~a~~~-~~~~f~~vd~~~--~~~~~~~~gi~~~~~~P~~vi~~~~-~ 338 (363)
....++++++.|..+ .....+.+.+.. .+++... .++.+..+|.++ ...+++.|++ ...|++++++++ |
T Consensus 38 Ak~~~K~vlvd~~a~-wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v---~~~P~~~fld~~~G 113 (153)
T 2dlx_A 38 GQMQNKWLMINIQNV-QDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKL---GDFPYVSILDPRTG 113 (153)
T ss_dssp HHHHTCEEEEEEECS-CTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTC---CSSSEEEEECTTTC
T ss_pred HHHcCCeEEEEEECC-CCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCC---CCCCEEEEEeCCCC
Confidence 345567777777654 455555443222 2233322 247777888764 3568899998 578999999997 6
Q ss_pred -CeeEEEEEEeehhhhhHhhhhh
Q 017971 339 -NYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 339 -~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
......+ +..+++..++..+|
T Consensus 114 ~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 114 QKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp CCCEEESS-CCHHHHHHHHHHHH
T ss_pred cEeeecCC-CCHHHHHHHHHHHH
Confidence 3444444 55566665555554
No 447
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=89.34 E-value=0.6 Score=37.72 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=32.1
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEe
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVD 102 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd 102 (363)
..+.+++.|....|++|+++.+.+..+.+.+ ..++|.+.-.+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~--~~g~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQA--GEDNVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHH--CTTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHh--CCCCEEEEEEE
Confidence 4467899999999999999999998876654 13347776555
No 448
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=88.85 E-value=0.76 Score=33.34 Aligned_cols=70 Identities=11% Similarity=-0.093 Sum_probs=49.0
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEecc------CchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEE
Q 017971 273 IVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK------QFADFADTFEANKKSKLPKMVVWDGNENYLTVSIN 346 (363)
Q Consensus 273 ~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~------~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~ 346 (363)
.++.|+ ..-....+.+...+.+++.+++ .+|+. .++.+++.+|+ ...|++++ +|+. ..|.
T Consensus 15 ~vV~F~-A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V---~~~PT~~i---~G~~--~~G~ 80 (106)
T 3kp8_A 15 GGTMYG-AYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGI---TSYPTWII---NGRT--YTGV 80 (106)
T ss_dssp TCEEEE-CTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTC---CSSSEEEE---TTEE--EESC
T ss_pred EEEEEE-CCCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCC---eEeCEEEE---CCEE--ecCC
Confidence 344555 3466777888888888887665 34444 56789999999 78999888 5553 5677
Q ss_pred EeehhhhhHh
Q 017971 347 VLKTRVCFFM 356 (363)
Q Consensus 347 ~~~~~~~~~~ 356 (363)
...+.+..|+
T Consensus 81 ~~~~~l~~~~ 90 (106)
T 3kp8_A 81 RSLEALAVAS 90 (106)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 7777776664
No 449
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=88.69 E-value=2.2 Score=33.11 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=39.3
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEecc---------------------CchhHHhhcCCC-CCCCC
Q 017971 273 IVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIK---------------------QFADFADTFEAN-KKSKL 328 (363)
Q Consensus 273 ~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~---------------------~~~~~~~~~gi~-~~~~~ 328 (363)
+++.|+..............|+++++++++ +.++.|+.+ ....+.+.||+. .....
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~ 111 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPA 111 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCC
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCccc
Confidence 555554233444445555555555555432 555555443 234577888881 01238
Q ss_pred CeEEEEeCCCCe
Q 017971 329 PKMVVWDGNENY 340 (363)
Q Consensus 329 P~~vi~~~~~~y 340 (363)
|..++++++|+.
T Consensus 112 P~~~lid~~G~i 123 (161)
T 3drn_A 112 RITFVIDKKGII 123 (161)
T ss_dssp CEEEEECTTSBE
T ss_pred ceEEEECCCCEE
Confidence 999999999964
No 450
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=88.53 E-value=0.33 Score=43.68 Aligned_cols=71 Identities=7% Similarity=0.141 Sum_probs=39.6
Q ss_pred hHHHhHcCCCeEEEEEECCCChhhhhHHH-HHHHHHHHhhcCCCCeEEEEEeC-ccc----hhhhhhCCcCcCCEEEEEe
Q 017971 52 NFDSAISSFDYILVDFYAPWCGHCKRLAP-QLDEAAPILAKLKEPIVIAKVDA-DKY----SRLASKQEIDAFPTLKIFM 125 (363)
Q Consensus 52 ~f~~~l~~~~~~lv~fy~~~C~~C~~~~~-~~~~~a~~~~~~~~~v~~~~vd~-~~~----~~l~~~~~i~~~Pt~~~~~ 125 (363)
..+++++.++ ++.|..+||++|++... .+++..-.+ ..+.+..+|- ++. ..+.+..|.+.+|+++ .
T Consensus 253 ~V~~lI~~~~--VvVYsk~~CPyC~~Ak~~LL~~~gV~y----~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVF--I 324 (362)
T 2jad_A 253 HVKDLIAENE--IFVASKTYCPYSHAALNTLFEKLKVPR----SKVLVLQLNDMKEGADIQAALYEINGQRTVPNIY--I 324 (362)
T ss_dssp HHHHHHHTCS--EEEEECTTCHHHHHHHHHHHTTTCCCT----TTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEE--E
T ss_pred HHHHHhccCC--EEEEEcCCCcchHHHHHHHHHHcCCCc----ceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEE--E
Confidence 3444555543 56689999999988755 333321111 1233333322 222 3344567889999975 4
Q ss_pred CCEEE
Q 017971 126 HGIPT 130 (363)
Q Consensus 126 ~g~~~ 130 (363)
+|+.+
T Consensus 325 ~Gk~I 329 (362)
T 2jad_A 325 NGKHI 329 (362)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 77654
No 451
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=88.52 E-value=2 Score=32.49 Aligned_cols=69 Identities=10% Similarity=0.163 Sum_probs=46.9
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccCc--------------------------hhHHhhcC
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF--------------------------ADFADTFE 321 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~~--------------------------~~~~~~~g 321 (363)
++++++.|+.. ...........|.++.+++++ +.++.|+.+.. ..+.+.||
T Consensus 32 gk~vll~F~a~-wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 32 GRYTLLNFWAA-YDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp CCEEEEEEECT-TCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCEEEEEEEcC-cCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 45666666644 555577777888888888764 77777765421 13455666
Q ss_pred CCCCCCCCeEEEEeCCCCeeE
Q 017971 322 ANKKSKLPKMVVWDGNENYLT 342 (363)
Q Consensus 322 i~~~~~~P~~vi~~~~~~y~~ 342 (363)
+ ...|+.++++++|+...
T Consensus 111 v---~~~P~~~lid~~G~i~~ 128 (143)
T 4fo5_A 111 L---RKGFKNFLINDEGVIIA 128 (143)
T ss_dssp G---GGCCCEEEECTTSBEEE
T ss_pred C---CCCCcEEEECCCCEEEE
Confidence 6 46799999999987543
No 452
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=88.27 E-value=2.1 Score=31.78 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=25.2
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccch
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS 107 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~ 107 (363)
++.|+.|+|+.|++....+++. + +.+-.+|..+++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-----g----i~y~~~di~~~~ 41 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-----G----IDYTFHDYKKEG 41 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----T----CCEEEEEHHHHC
T ss_pred EEEEECCCChHHHHHHHHHHHc-----C----CcEEEEeeeCCC
Confidence 6678899999999887777652 2 556667775543
No 453
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=88.17 E-value=2.6 Score=35.57 Aligned_cols=88 Identities=8% Similarity=0.046 Sum_probs=61.2
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEecc--------------------------------------
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK-------------------------------------- 311 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~-------------------------------------- 311 (363)
+.+..++.|.+-...-.+++...++++.+. .++.+.++...
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS-GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT-TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC-CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 345666666677888888888888877665 34666654321
Q ss_pred ------------CchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhhc
Q 017971 312 ------------QFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 312 ------------~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 361 (363)
...++.+.+|+ ...|++++.+++|++....|-...+.+...+...+|
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv---~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGA---NVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTC---CSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC---
T ss_pred ccCCHHHHHHHHHHHHHHHHcCC---CCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHHH
Confidence 12335677888 678999999988887777787778888888877776
No 454
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=88.08 E-value=0.71 Score=44.86 Aligned_cols=67 Identities=28% Similarity=0.433 Sum_probs=44.8
Q ss_pred hhHHHhHcCCCeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc---hh----hhhhCCcCcCCEEEE
Q 017971 51 SNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY---SR----LASKQEIDAFPTLKI 123 (363)
Q Consensus 51 ~~f~~~l~~~~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~---~~----l~~~~~i~~~Pt~~~ 123 (363)
+.+++.++.++ ++.|..+||++|++....+.+.. +.+-.+|.+.. ++ +.+..+...+|.+
T Consensus 9 ~~v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~~---------i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v-- 75 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSKTTCPYCKKVKDVLAEAK---------IKHATIELDQLSNGSAIQKCLASFSKIETVPQM-- 75 (598)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTT---------CCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE--
T ss_pred HHHHHHhccCC--EEEEECCCChhHHHHHHHHHHCC---------CCcEEEEcccCcchHHHHHHHHHHhCCceeCEE--
Confidence 56777776543 66799999999998887777531 44555666543 22 3334678899988
Q ss_pred EeCCEEE
Q 017971 124 FMHGIPT 130 (363)
Q Consensus 124 ~~~g~~~ 130 (363)
|-+|+.+
T Consensus 76 ~i~g~~i 82 (598)
T 2x8g_A 76 FVRGKFI 82 (598)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 4567654
No 455
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=87.98 E-value=1.2 Score=30.21 Aligned_cols=57 Identities=12% Similarity=0.194 Sum_probs=41.2
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccCc----hhHHhhcCCCCCCCCCeEEE
Q 017971 276 AIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQF----ADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 276 ~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~~----~~~~~~~gi~~~~~~P~~vi 333 (363)
.+|........+.....|.+++.+++++.|..+|.... +.+.+.+|. .....|++.+
T Consensus 4 ~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~-~~~~vP~i~~ 64 (85)
T 1ego_A 4 VIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGK-PVETVPQIFV 64 (85)
T ss_dssp EEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCC-CSCCSCEEEE
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCC-CCceeCeEEE
Confidence 34445566777888889999888877899999998654 367777882 1267899843
No 456
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=87.76 E-value=2.2 Score=33.36 Aligned_cols=34 Identities=0% Similarity=-0.133 Sum_probs=23.5
Q ss_pred CCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 328 LPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 328 ~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.|++++++++|+. +...+....+++...+..+|+
T Consensus 130 ~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 130 SIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp CCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred cceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3489999999853 334455666778777777664
No 457
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=87.62 E-value=1.2 Score=35.71 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=30.6
Q ss_pred CCeEEEEEECCCChhhhhHHHHH-HHHHHHhhcCCCCeEEEEEe
Q 017971 60 FDYILVDFYAPWCGHCKRLAPQL-DEAAPILAKLKEPIVIAKVD 102 (363)
Q Consensus 60 ~~~~lv~fy~~~C~~C~~~~~~~-~~~a~~~~~~~~~v~~~~vd 102 (363)
.+..++.|+.+.|++|..+.+.+ .++.+.+.+ .+++.+...+
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~-~~~v~~~~~~ 53 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYID-NHKVEYQFVN 53 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTSSEEEEEE
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhcc-CCeEEEEEEe
Confidence 46789999999999999999998 467666532 1236555544
No 458
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=87.16 E-value=1.4 Score=36.28 Aligned_cols=44 Identities=16% Similarity=0.215 Sum_probs=31.7
Q ss_pred CCCeEEEEEECCCChhhhhHHHHHHHHHH-HhhcCCCCeEEEEEeC
Q 017971 59 SFDYILVDFYAPWCGHCKRLAPQLDEAAP-ILAKLKEPIVIAKVDA 103 (363)
Q Consensus 59 ~~~~~lv~fy~~~C~~C~~~~~~~~~~a~-~~~~~~~~v~~~~vd~ 103 (363)
..+.++|.|....|++|+++.+.....-+ .+-. .++|.+.-.+.
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~-~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQ-PGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhcc-CCeEEEEEEeC
Confidence 34678999999999999999988765544 5522 33577765554
No 459
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=86.35 E-value=1.5 Score=29.58 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=36.2
Q ss_pred CCChhhHHHHHHHHHHHHHhCCC-cEEEEEecc-CchhHHhhcCCCCCCCCCeEEE
Q 017971 280 DETEEKSQKLVTTLKAAASANRE-LVFCYVGIK-QFADFADTFEANKKSKLPKMVV 333 (363)
Q Consensus 280 ~~~~~~~~~~~~~l~~~a~~~~~-~~f~~vd~~-~~~~~~~~~gi~~~~~~P~~vi 333 (363)
.......+.....+.+++.++.. +.+..+|.+ ...+.++.+|+ ...|++++
T Consensus 9 ~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv---~~vPt~~i 61 (80)
T 2k8s_A 9 HAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGV---KSVPALVI 61 (80)
T ss_dssp ECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTC---CEEEEEEE
T ss_pred CCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCC---CcCCEEEE
Confidence 44677778888888887766543 555556553 45678888998 57899887
No 460
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=85.61 E-value=2 Score=34.74 Aligned_cols=47 Identities=9% Similarity=-0.085 Sum_probs=28.8
Q ss_pred hhHHhhcCCC-C-CCCCCeEEEEeCCCCeeE-EEEEE----eehhhhhHhhhhh
Q 017971 314 ADFADTFEAN-K-KSKLPKMVVWDGNENYLT-VSINV----LKTRVCFFMLTLL 360 (363)
Q Consensus 314 ~~~~~~~gi~-~-~~~~P~~vi~~~~~~y~~-~~~~~----~~~~~~~~~~~~~ 360 (363)
..+.+.||+. . ....|++++++++|+.-. ..+.. ..+++...+..++
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 3567778872 0 016899999999986333 22332 3466666666554
No 461
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=85.05 E-value=2.4 Score=33.08 Aligned_cols=89 Identities=17% Similarity=0.105 Sum_probs=53.4
Q ss_pred CCcEEEEEEeCCChhh-HHHHHHHHHHHHHhCC-----CcEEEEEeccCc----------------------------hh
Q 017971 270 KRKIVLAIVEDETEEK-SQKLVTTLKAAASANR-----ELVFCYVGIKQF----------------------------AD 315 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~-~~~~~~~l~~~a~~~~-----~~~f~~vd~~~~----------------------------~~ 315 (363)
++++++.|+.. .... .......|+++.++++ ++.++.|+.+.. ..
T Consensus 35 gk~vll~f~~~-~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 35 DKVVLLFFGFT-RCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TSEEEEEEECT-TCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCEEEEEEECC-CCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 45666666544 4443 6666777788777776 577777765421 24
Q ss_pred HHhhcCCCC------------CCCCCeEEEEeCCCCe-eEEEEEE--eehhhhhHhhhhh
Q 017971 316 FADTFEANK------------KSKLPKMVVWDGNENY-LTVSINV--LKTRVCFFMLTLL 360 (363)
Q Consensus 316 ~~~~~gi~~------------~~~~P~~vi~~~~~~y-~~~~~~~--~~~~~~~~~~~~~ 360 (363)
+.+.||+.. ....|++++++ +|+. +...+.. ..+++...+..+|
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ll 172 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQALL 172 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHCC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHhC
Confidence 555565410 13569999999 9863 3333444 5566666666554
No 462
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=84.28 E-value=0.86 Score=36.66 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=31.1
Q ss_pred chhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhhc
Q 017971 106 YSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 106 ~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~ 149 (363)
+..+++++||.++||+++ +|+. +.|..+.+.+.+.+.+..
T Consensus 138 ~~~~a~~~gv~GtPt~vv--nG~~--~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI--NGEK--VEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTEE--CSCTTCHHHHHHHHHC--
T ss_pred HHHHHHHcCCCCCCeEEE--CCEE--cCCCCCHHHHHHHHHHHH
Confidence 355778899999999987 7764 468888999999887654
No 463
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=84.17 E-value=9.5 Score=27.34 Aligned_cols=85 Identities=12% Similarity=0.194 Sum_probs=65.3
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHH
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLV 142 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~ 142 (363)
....|.+..-+.+++....+.++-+.... +.++.+-.||..++|++++.++|-.+||++=-...-.-+.-|..-...+.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~-~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~P~rriiGd~i~~ql~ 91 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEA-TVPISLQVINVADQPQLVEYYRLVVTPALVKIGPGSRQVLSGIDLTDQLA 91 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCC-SSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESSSCEEEESSCHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhcc-CCceEEEEeecccCHHHHhHcCeeeccHhhccCCCCceEEeChHHHHHHH
Confidence 33467778888888888888887766542 33599999999999999999999999998855443333467887788888
Q ss_pred HHHHhh
Q 017971 143 RYLKKF 148 (363)
Q Consensus 143 ~~i~~~ 148 (363)
.|.-+.
T Consensus 92 ~wwprW 97 (105)
T 1t4y_A 92 NQLPQW 97 (105)
T ss_dssp HHHHHH
T ss_pred HHhHHH
Confidence 887554
No 464
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=83.55 E-value=4.9 Score=30.91 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=22.5
Q ss_pred eEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 330 KMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 330 ~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.+++++++|+. +...+....+++...+..+|+
T Consensus 129 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 129 IMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp EEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred eEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 89999999853 333455566778877777764
No 465
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=83.99 E-value=0.22 Score=37.88 Aligned_cols=24 Identities=8% Similarity=0.358 Sum_probs=19.0
Q ss_pred hhHHhhcCCCCCCCCCeEEEEeCCCCe
Q 017971 314 ADFADTFEANKKSKLPKMVVWDGNENY 340 (363)
Q Consensus 314 ~~~~~~~gi~~~~~~P~~vi~~~~~~y 340 (363)
..+.+.||+ ...|++++++++|+.
T Consensus 98 ~~~~~~~~v---~~~P~~~lid~~G~i 121 (143)
T 2lus_A 98 SNVTAKYGI---TGIPALVIVKKDGTL 121 (143)
Confidence 357778888 568999999988853
No 466
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=83.44 E-value=2.6 Score=33.71 Aligned_cols=47 Identities=4% Similarity=-0.137 Sum_probs=28.8
Q ss_pred hhHHhhcCCC-C--CCCCCeEEEEeCCCCeeE-EEEEE----eehhhhhHhhhhh
Q 017971 314 ADFADTFEAN-K--KSKLPKMVVWDGNENYLT-VSINV----LKTRVCFFMLTLL 360 (363)
Q Consensus 314 ~~~~~~~gi~-~--~~~~P~~vi~~~~~~y~~-~~~~~----~~~~~~~~~~~~~ 360 (363)
..+.+.||+. . ....|+++++|++|+... ..+.. ..+++...+..++
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 4577788882 0 016899999999986433 33332 3556666665543
No 467
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=83.42 E-value=1.8 Score=34.91 Aligned_cols=57 Identities=12% Similarity=0.164 Sum_probs=36.3
Q ss_pred CCCeEEEEEEC-CCChhhh-hHHHHHHHHHHHh-hcCCCCeEEEEEeCcc---chhhhhhCCcC
Q 017971 59 SFDYILVDFYA-PWCGHCK-RLAPQLDEAAPIL-AKLKEPIVIAKVDADK---YSRLASKQEID 116 (363)
Q Consensus 59 ~~~~~lv~fy~-~~C~~C~-~~~~~~~~~a~~~-~~~~~~v~~~~vd~~~---~~~l~~~~~i~ 116 (363)
.++.+++.||. .||+.|. ...+.|.+...++ +..+-. .+.-|-++. ....|++.++.
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~-~V~gvS~D~~~~~~~~~~~~~~~ 104 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD-DIYCITNNDIYVLKSWFKSMDIK 104 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS-EEEEEESSCHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeCCCHHHHHHHHHHcCCC
Confidence 34666676664 5999999 8899999998888 665422 244444433 23445555543
No 468
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=83.42 E-value=4.4 Score=31.84 Aligned_cols=41 Identities=7% Similarity=0.126 Sum_probs=30.6
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEe
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVG 309 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd 309 (363)
...+..++.|.+-...-...+...+.++.++++++.+.+.+
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~ 60 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYRE 60 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 33455566666778888889999999998888777777665
No 469
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=82.53 E-value=7.5 Score=30.08 Aligned_cols=90 Identities=8% Similarity=0.094 Sum_probs=52.0
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccC-----------------------chhHHhhcCCCCCC
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKS 326 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~-----------------------~~~~~~~~gi~~~~ 326 (363)
++++++.|+..............|++++++++++.++.|+.+. ...+.+.||+. ..
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~-~~ 122 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVY-IK 122 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCB-BT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCc-cc
Confidence 4567766665432555556666777777666556666665432 12355566662 11
Q ss_pred --C--CCeEEEEeCCCCeeEEE-E-----EEeehhhhhHhhhhh
Q 017971 327 --K--LPKMVVWDGNENYLTVS-I-----NVLKTRVCFFMLTLL 360 (363)
Q Consensus 327 --~--~P~~vi~~~~~~y~~~~-~-----~~~~~~~~~~~~~~~ 360 (363)
+ .|..++++++|+..... + +..-+++...+.++|
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 1 49999999998633322 1 112356777777665
No 470
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=83.08 E-value=0.26 Score=38.44 Aligned_cols=45 Identities=7% Similarity=0.134 Sum_probs=27.0
Q ss_pred hHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEeehhhhhHhhhhh
Q 017971 315 DFADTFEANKKSKLPKMVVWDGNENYLTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 315 ~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~~~~~~~~~~~~ 360 (363)
.+.+.||+ .....|++++++++|+......-.....+..++..+.
T Consensus 103 ~~~~~~~~-~~~~~P~~~lid~~G~i~~~~~g~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 103 DIFAKYAL-RDAGITRNVLIDREGKIVKLTRLYNEEEFASLVQQIN 147 (159)
Confidence 46667775 2356899999999985332222234455666555543
No 471
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=82.28 E-value=0.97 Score=33.52 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=36.0
Q ss_pred hhhhhhcCCCCCCeEEEEcCCCCCcccccCCCCHHHHHHHHHhh
Q 017971 207 EDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 250 (363)
Q Consensus 207 ~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~~~~~~l~~fi~~~ 250 (363)
.+++..+++.+.|++++|++ .++.....|....+.+..|+++.
T Consensus 66 ~~la~~~~V~g~PT~i~f~~-G~ev~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 66 PGLELARPVTFTPTFVLMAG-DVESGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp TTCBCSSCCCSSSEEEEEET-TEEEEEEECCCCHHHHHHHHHHH
T ss_pred hhHHHHCCCCCCCEEEEEEC-CEEEeeecCCCCHHHHHHHHHHH
Confidence 46788899999999999984 45556788999999999999874
No 472
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=82.24 E-value=12 Score=28.79 Aligned_cols=77 Identities=21% Similarity=0.257 Sum_probs=43.5
Q ss_pred cEEEeecCCh-hHHHHHHHHhhhhh--------HHHHh-hh-cchhhhhhcCCCCCCeEEEEcCCCCCcccccCC-----
Q 017971 174 PLFIGFGLDE-SVMSNLALKYKKKA--------WFAVA-KD-FSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP----- 237 (363)
Q Consensus 174 ~~~v~~~~~~-~~~~~~a~~~~~~~--------~~~~~-~~-~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g~----- 237 (363)
+++|.|+.++ ..++.+...+.... .|..+ .+ ...+....+++.+.|+++++.+++.......|.
T Consensus 46 pVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~ 125 (151)
T 3ph9_A 46 PLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRL 125 (151)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTST
T ss_pred cEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcc
Confidence 6888887653 44555544333211 11111 11 123457789999999999998655555555565
Q ss_pred --C---CHHHHHHHHHhh
Q 017971 238 --F---DEEFLEEFIKQN 250 (363)
Q Consensus 238 --~---~~~~l~~fi~~~ 250 (363)
. +.+.+.+.+++.
T Consensus 126 ~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 126 YTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp TCCCGGGHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHH
Confidence 3 345555555543
No 473
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=81.63 E-value=3.1 Score=32.01 Aligned_cols=69 Identities=7% Similarity=0.058 Sum_probs=40.3
Q ss_pred cEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccC-----------------------chhHHhhcCCC-CC
Q 017971 272 KIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-----------------------FADFADTFEAN-KK 325 (363)
Q Consensus 272 ~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~-----------------------~~~~~~~~gi~-~~ 325 (363)
++++.|+..............|.++++++++ +.++.|+.+. ...+.+.||+. ..
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 5555554233444455556666666666542 5555554432 34577788882 11
Q ss_pred CCCC--eEEEEeCCCCe
Q 017971 326 SKLP--KMVVWDGNENY 340 (363)
Q Consensus 326 ~~~P--~~vi~~~~~~y 340 (363)
...| +.++++++|+.
T Consensus 118 ~~~p~~~~~lid~~G~i 134 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGII 134 (160)
T ss_dssp TTEECSEEEEECTTSBE
T ss_pred CCCeeeeEEEECCCCeE
Confidence 1567 89999999863
No 474
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=81.46 E-value=1.6 Score=35.74 Aligned_cols=43 Identities=12% Similarity=0.196 Sum_probs=33.8
Q ss_pred hhhhhhCCcCcCCEEEEEeCCEEEe-ecCCCCHHHHHHHHHhhc
Q 017971 107 SRLASKQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 107 ~~l~~~~~i~~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i~~~~ 149 (363)
...++++||.|+|++++..+|+.+. ..|..+.+.+.+.+++.+
T Consensus 159 ~~~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 159 LSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 4567789999999999988887654 568788888888777654
No 475
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=81.31 E-value=9.2 Score=29.47 Aligned_cols=93 Identities=10% Similarity=0.060 Sum_probs=58.7
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccC-----------chhHHh-hcCCC------------
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-----------FADFAD-TFEAN------------ 323 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~-----------~~~~~~-~~gi~------------ 323 (363)
++++++.|+.. ...........|+++++++++ +.++.|+.+. ..++++ .++++
T Consensus 32 gk~vll~f~a~-~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 32 GKVLLIVNVAS-KCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TSEEEEEEECS-SSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCEEEEEEEec-cCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 46677666653 455566667777777777654 7777776531 233455 44321
Q ss_pred ----------------CCCCCC---eEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhcCC
Q 017971 324 ----------------KKSKLP---KMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQFS 363 (363)
Q Consensus 324 ----------------~~~~~P---~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~~~ 363 (363)
.....| +.++++++|+. +...+....+.++..+..+|.-|
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~s 170 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEIS 170 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTCC
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhcC
Confidence 003457 89999999863 44456666778888888888643
No 476
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=81.12 E-value=5.1 Score=31.29 Aligned_cols=92 Identities=11% Similarity=0.047 Sum_probs=52.9
Q ss_pred CCCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEecc-----------CchhHH-hhcCCC-----------
Q 017971 269 DKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIK-----------QFADFA-DTFEAN----------- 323 (363)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~-----------~~~~~~-~~~gi~----------- 323 (363)
.++++++.|+.. ...... ....|+++.+++++ +.++.|+.+ ...+++ +.++++
T Consensus 31 ~Gk~vll~F~a~-wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVAS-KCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEES-SSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEec-CCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 356777777654 334455 56677777776654 777777542 123344 322211
Q ss_pred ---------------CCCCCC------eEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhcC
Q 017971 324 ---------------KKSKLP------KMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQF 362 (363)
Q Consensus 324 ---------------~~~~~P------~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~~ 362 (363)
.....| +.++++++|+. +...+....+.+...+..+|.-
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKE 169 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHTC
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 013468 89999999863 3444566778888888888763
No 477
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=80.22 E-value=4.5 Score=32.79 Aligned_cols=46 Identities=4% Similarity=0.082 Sum_probs=26.9
Q ss_pred hHHhhcCCC-CC--CCCCeEEEEeCCCCeeEEE-EEEe----ehhhhhHhhhhh
Q 017971 315 DFADTFEAN-KK--SKLPKMVVWDGNENYLTVS-INVL----KTRVCFFMLTLL 360 (363)
Q Consensus 315 ~~~~~~gi~-~~--~~~P~~vi~~~~~~y~~~~-~~~~----~~~~~~~~~~~~ 360 (363)
.+.+.||+. .. ...|++++++++|+..... +... .+++...+..++
T Consensus 111 ~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 111 CIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 466777772 00 1689999999998643332 2222 255655555543
No 478
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=79.40 E-value=1.5 Score=35.27 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=30.0
Q ss_pred hhhhhCCcCcCCEEEEEeCCEEEe-ecCCCCHHHHHHHH
Q 017971 108 RLASKQEIDAFPTLKIFMHGIPTE-YYGPRKAELLVRYL 145 (363)
Q Consensus 108 ~l~~~~~i~~~Pt~~~~~~g~~~~-y~g~~~~~~i~~~i 145 (363)
..++++||.++||+++ +|+.+. ..|..+.+.++++|
T Consensus 145 ~~a~~~GV~gtPtf~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE--CCEEccCCCCCCCHHHHHHHh
Confidence 4667789999999987 888774 78889999998876
No 479
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=79.03 E-value=8.9 Score=27.66 Aligned_cols=64 Identities=17% Similarity=0.198 Sum_probs=45.1
Q ss_pred HHHHHHHHH---HhhcCCCCeEEEEEeCccch----------hhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHH
Q 017971 79 APQLDEAAP---ILAKLKEPIVIAKVDADKYS----------RLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYL 145 (363)
Q Consensus 79 ~~~~~~~a~---~~~~~~~~v~~~~vd~~~~~----------~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i 145 (363)
.|++.+++. .+++. .+.+.+.|..++| ++.+++|+...|.+++ +|+.+..-...+.+++.+|+
T Consensus 26 d~eL~~~~~~~~~lk~~--Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~V--DGevv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQ--GIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLV--DGEIAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp CHHHHHHHHHHHHHHHT--TCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEE--TTEEEECSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHC--CCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEEEEeccCCCHHHHHHHh
Confidence 444444433 34443 3888999998887 5667799999999886 77665544457889999987
Q ss_pred H
Q 017971 146 K 146 (363)
Q Consensus 146 ~ 146 (363)
.
T Consensus 102 g 102 (106)
T 3ktb_A 102 G 102 (106)
T ss_dssp C
T ss_pred C
Confidence 4
No 480
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=78.53 E-value=3.2 Score=33.01 Aligned_cols=55 Identities=5% Similarity=-0.076 Sum_probs=38.0
Q ss_pred CCCeEEEEEEC-CCChhhhhHHHHHHHHHHHhhcCCCCeE-EEEEeCcc---chhhhhhCCc
Q 017971 59 SFDYILVDFYA-PWCGHCKRLAPQLDEAAPILAKLKEPIV-IAKVDADK---YSRLASKQEI 115 (363)
Q Consensus 59 ~~~~~lv~fy~-~~C~~C~~~~~~~~~~a~~~~~~~~~v~-~~~vd~~~---~~~l~~~~~i 115 (363)
.++.+++.||. .||+.|....+.|.+...+++..+ +. +.-|.++. ....|++.++
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g--v~~VigIS~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG--YHTIACIAVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT--CCEEEEEESSCHHHHHHHHHHHCT
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CCEEEEEeCCCHHHHHHHHHhcCC
Confidence 34667777775 489999999999999998888665 42 44455443 2345666665
No 481
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=77.89 E-value=1.8 Score=32.73 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=24.0
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
++.|+.++|++|++....+++. + +.+-.+|..++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-------g--i~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-------E--IPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------C--CceEEEEccCC
Confidence 5678899999999887776642 2 55556676554
No 482
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=77.16 E-value=8.2 Score=31.82 Aligned_cols=47 Identities=6% Similarity=0.035 Sum_probs=28.1
Q ss_pred hhHHhhcCCC-C--CCCCCeEEEEeCCCCeeEE-EEEE----eehhhhhHhhhhh
Q 017971 314 ADFADTFEAN-K--KSKLPKMVVWDGNENYLTV-SINV----LKTRVCFFMLTLL 360 (363)
Q Consensus 314 ~~~~~~~gi~-~--~~~~P~~vi~~~~~~y~~~-~~~~----~~~~~~~~~~~~~ 360 (363)
..+.+.||+. . ....|+++++|++|+.... .+.+ ..+++...+..++
T Consensus 130 ~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 130 KQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 3577778871 0 0167999999999964332 2222 2256666665544
No 483
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=76.78 E-value=10 Score=27.60 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=40.6
Q ss_pred eEEEEEeCccch----------hhhhhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhh
Q 017971 96 IVIAKVDADKYS----------RLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKF 148 (363)
Q Consensus 96 v~~~~vd~~~~~----------~l~~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~ 148 (363)
+.+.+.|..+++ ++.+++|+...|.+++ +|+.+..-...+.++|.+|+.-.
T Consensus 41 i~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V--DGevv~~G~yPt~eEl~~~lgi~ 101 (110)
T 3kgk_A 41 VQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL--DGETVMAGRYPKRAELARWFGIP 101 (110)
T ss_dssp CCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE--TTEEEEESSCCCHHHHHHHHTCC
T ss_pred CeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEEEEeccCCCHHHHHHHhCCC
Confidence 889999999887 5667789999999886 77766555557889999998643
No 484
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=76.19 E-value=2.3 Score=34.43 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=28.8
Q ss_pred hhHHhhcCCCC--CCCCCeEEEEeCCCCeeEE-EEEE----eehhhhhHhhhhh
Q 017971 314 ADFADTFEANK--KSKLPKMVVWDGNENYLTV-SINV----LKTRVCFFMLTLL 360 (363)
Q Consensus 314 ~~~~~~~gi~~--~~~~P~~vi~~~~~~y~~~-~~~~----~~~~~~~~~~~~~ 360 (363)
..+.+.||+.. ....|+.++++++|+.... .+.+ ..+++...+..+.
T Consensus 107 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 107 KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp SHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 45778888810 0168999999999864333 2333 3456666665543
No 485
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=76.09 E-value=7.9 Score=30.43 Aligned_cols=46 Identities=11% Similarity=0.139 Sum_probs=26.0
Q ss_pred hhHHhhcCCCCCC-------CCCeEEEEeCCCCeeEEEE--EE-eehhhhhHhhhhh
Q 017971 314 ADFADTFEANKKS-------KLPKMVVWDGNENYLTVSI--NV-LKTRVCFFMLTLL 360 (363)
Q Consensus 314 ~~~~~~~gi~~~~-------~~P~~vi~~~~~~y~~~~~--~~-~~~~~~~~~~~~~ 360 (363)
..+.+.||+. .. ..|..++++++|+.-.... .. ....+...+..+.
T Consensus 109 ~~~~~~~gv~-~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 109 DSFGEDYGVT-IADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp SSHHHHTTCB-BCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred HHHHHHhCCc-ccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 3466778872 21 1399999999996433331 22 2334555555443
No 486
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=73.58 E-value=2.3 Score=34.17 Aligned_cols=42 Identities=17% Similarity=0.255 Sum_probs=32.4
Q ss_pred chhhhhhCCcCcCCEEEEEeCCEE-EeecCCCCHHHHHHHHHhhc
Q 017971 106 YSRLASKQEIDAFPTLKIFMHGIP-TEYYGPRKAELLVRYLKKFV 149 (363)
Q Consensus 106 ~~~l~~~~~i~~~Pt~~~~~~g~~-~~y~g~~~~~~i~~~i~~~~ 149 (363)
+...++++||.|+|++++ +|+. +...|..+.+.+.+-+...+
T Consensus 141 ~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHHHHHHHH
Confidence 455678899999999987 6664 45789888888887776543
No 487
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=73.47 E-value=3.3 Score=33.98 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=32.4
Q ss_pred hhhh-hhCCcCcCCEEEEEeCCEEEeecCCCCHHHHHHHHHhhcC
Q 017971 107 SRLA-SKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVA 150 (363)
Q Consensus 107 ~~l~-~~~~i~~~Pt~~~~~~g~~~~y~g~~~~~~i~~~i~~~~~ 150 (363)
...+ +++||.++|++++ +|+. +.|..+.+.+.+.|.+...
T Consensus 157 ~~~a~~~~GV~GtPtfvv--ng~~--~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 157 TDEAINQYNVSGTPSFMI--DGIL--LAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHCCCSSSEEEE--TTEE--CTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCccCCEEEE--CCEE--EeCCCCHHHHHHHHHHHhh
Confidence 3456 8899999999987 7764 6799999999998877655
No 488
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=73.38 E-value=3.2 Score=30.76 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=23.5
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
+..|+.|+|+.|++....+++ .+ +.+-.+|..++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~g--i~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HD--VVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TT--CCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cC--CCeEEEecccC
Confidence 456889999999988766653 22 55666666544
No 489
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=73.34 E-value=13 Score=30.40 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=19.3
Q ss_pred hhHHhhcCCCC--CCCCCeEEEEeCCCCeeE
Q 017971 314 ADFADTFEANK--KSKLPKMVVWDGNENYLT 342 (363)
Q Consensus 314 ~~~~~~~gi~~--~~~~P~~vi~~~~~~y~~ 342 (363)
..+.+.||+.. ....|.+++++++|+...
T Consensus 126 ~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~ 156 (213)
T 2i81_A 126 KSISKDYNVLFDDSVSLRAFVLIDMNGIVQH 156 (213)
T ss_dssp SHHHHHTTCEETTTEECEEEEEECTTSBEEE
T ss_pred hHHHHHhCCccccCCcccEEEEECCCCEEEE
Confidence 35677777710 115799999999986433
No 490
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=73.00 E-value=2.9 Score=30.70 Aligned_cols=33 Identities=24% Similarity=0.209 Sum_probs=22.8
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCcc
Q 017971 64 LVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADK 105 (363)
Q Consensus 64 lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~ 105 (363)
++.|+.|+|+.|++....+++ .+ +.+-.+|..+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~g--i~~~~~di~~ 34 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HK--VAYDFHDYKA 34 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TT--CCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------CC--CceEEEeecC
Confidence 456889999999988766654 12 5566666544
No 491
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=72.79 E-value=10 Score=30.35 Aligned_cols=45 Identities=7% Similarity=0.143 Sum_probs=25.6
Q ss_pred hHHhhcCCCCCC---CCCeEEEEeCCCCeeEE-EEEEe----ehhhhhHhhhh
Q 017971 315 DFADTFEANKKS---KLPKMVVWDGNENYLTV-SINVL----KTRVCFFMLTL 359 (363)
Q Consensus 315 ~~~~~~gi~~~~---~~P~~vi~~~~~~y~~~-~~~~~----~~~~~~~~~~~ 359 (363)
.+.+.||+.... ..|..++++++|+.... .+.+. .+++...+..+
T Consensus 109 ~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 109 RLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 466777772001 57999999999863332 23222 24555555543
No 492
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=71.25 E-value=11 Score=30.03 Aligned_cols=91 Identities=12% Similarity=0.052 Sum_probs=54.6
Q ss_pred CCcEEEEEEeCCChhhHHHHHHHHHHHHHhCCC--cEEEEEeccC-----------chhHH-hhcCCC------------
Q 017971 270 KRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-----------FADFA-DTFEAN------------ 323 (363)
Q Consensus 270 ~~~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~--~~f~~vd~~~-----------~~~~~-~~~gi~------------ 323 (363)
++++++.|... ...........|+++.+++++ +.++.|+.++ ..+++ +.+++.
T Consensus 48 Gk~vll~F~at-wC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 48 GSPLLIYNVAS-KCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TSCEEEEEECS-SSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCEEEEEEecC-CCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 46777776643 444555666777777776654 7777776541 13344 333221
Q ss_pred --------------CCCCCC------eEEEEeCCCCe-eEEEEEEeehhhhhHhhhhhc
Q 017971 324 --------------KKSKLP------KMVVWDGNENY-LTVSINVLKTRVCFFMLTLLQ 361 (363)
Q Consensus 324 --------------~~~~~P------~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~~ 361 (363)
.....| +.++++++|+. +...+....+++...+..+|.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 002356 89999999863 334455566777777777764
No 493
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=71.14 E-value=9.9 Score=30.00 Aligned_cols=33 Identities=6% Similarity=-0.261 Sum_probs=22.0
Q ss_pred CCeEEEEeCCCCe-eEEEEEEeehhhhhHhhhhh
Q 017971 328 LPKMVVWDGNENY-LTVSINVLKTRVCFFMLTLL 360 (363)
Q Consensus 328 ~P~~vi~~~~~~y-~~~~~~~~~~~~~~~~~~~~ 360 (363)
.|+.++++++|+. +...+....++++..+..+|
T Consensus 150 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 183 (183)
T 2obi_A 150 NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 183 (183)
T ss_dssp TTCEEEECTTSCEEEEECTTSCTHHHHTTSGGGC
T ss_pred cceEEEECCCCCEEEEeCCCCCHHHHHHHHHHhC
Confidence 4899999999863 33445555566666665554
No 494
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=71.09 E-value=9.4 Score=26.92 Aligned_cols=79 Identities=10% Similarity=0.131 Sum_probs=49.8
Q ss_pred cEEEEEEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEecc--CchhHHhhcCCCCCCCCCeEEEEeCCCCeeEEEEEEee
Q 017971 272 KIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNENYLTVSINVLK 349 (363)
Q Consensus 272 ~~~i~~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~--~~~~~~~~~gi~~~~~~P~~vi~~~~~~y~~~~~~~~~ 349 (363)
+.+++ |........+.....|.+++ .++.|..+|.+ +.+.+...+| ...|.++ . +|+.. .-+-...
T Consensus 17 ~~v~~-f~~~~C~~C~~~~~~L~~l~---~~i~~~~vdi~~~~~~el~~~~g----~~vP~l~-~--~g~~~-~~~g~~~ 84 (100)
T 1wjk_A 17 PVLTL-FTKAPCPLCDEAKEVLQPYK---DRFILQEVDITLPENSTWYERYK----FDIPVFH-L--NGQFL-MMHRVNT 84 (100)
T ss_dssp CEEEE-EECSSCHHHHHHHHHTSTTS---SSSEEEEEETTSSTTHHHHHHSS----SSCSEEE-E--SSSEE-EESSCCH
T ss_pred CEEEE-EeCCCCcchHHHHHHHHHhh---hCCeEEEEECCCcchHHHHHHHC----CCCCEEE-E--CCEEE-EecCCCH
Confidence 44444 44556777777666665543 23899999998 6677888776 2479764 3 34432 2333556
Q ss_pred hhhhhHhhhhhcC
Q 017971 350 TRVCFFMLTLLQF 362 (363)
Q Consensus 350 ~~~~~~~~~~~~~ 362 (363)
++++.++...++.
T Consensus 85 ~~l~~~l~~~~~~ 97 (100)
T 1wjk_A 85 SKLEKQLRKLSGP 97 (100)
T ss_dssp HHHHHHHHSSSCS
T ss_pred HHHHHHHHHHHhh
Confidence 7888888777653
No 495
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=70.72 E-value=4.5 Score=30.01 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=24.0
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccc
Q 017971 63 ILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKY 106 (363)
Q Consensus 63 ~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~ 106 (363)
.+..|+.|+|+.|++....+++. + +.+-.+|..++
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~-----g----i~~~~~di~~~ 38 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDL-----A----WDYDAIDIKKN 38 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHH-----T----CCEEEEETTTS
T ss_pred eEEEEeCCCChHHHHHHHHHHHc-----C----CceEEEEeccC
Confidence 35668899999999987766642 2 55556665543
No 496
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=69.83 E-value=14 Score=28.27 Aligned_cols=14 Identities=0% Similarity=-0.059 Sum_probs=11.9
Q ss_pred CCeEEEEeCCCCee
Q 017971 328 LPKMVVWDGNENYL 341 (363)
Q Consensus 328 ~P~~vi~~~~~~y~ 341 (363)
.|+.+++|++|+..
T Consensus 125 ~p~~~lid~~G~i~ 138 (163)
T 3gkn_A 125 ERSTFLLSPEGQVV 138 (163)
T ss_dssp CCEEEEECTTSCEE
T ss_pred ceEEEEECCCCeEE
Confidence 79999999999643
No 497
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=69.72 E-value=29 Score=30.48 Aligned_cols=105 Identities=12% Similarity=0.042 Sum_probs=68.6
Q ss_pred hcchhhhhhcCCCCCCeEEEEcCCCCCcccccC---CCCHHHHHHHHHhhcCCCcccCChhh----HHhhhcCCCcEEEE
Q 017971 204 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG---PFDEEFLEEFIKQNFLPLSVPINQDT----LNLLKDDKRKIVLA 276 (363)
Q Consensus 204 ~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g---~~~~~~l~~fi~~~~~p~~~~lt~~~----~~~l~~~~~~~~i~ 276 (363)
+.+++..+++++.-.|--+.+.+ ..+.++ .++.+++.+.+++...|.-.+.+... ++.+...+..++++
T Consensus 46 dL~~e~~~~~~I~vvPL~v~~~~----~~Y~D~vd~~i~~~efy~~m~~~~~p~TSqPs~~~~~~~f~~l~~~g~~Ii~I 121 (320)
T 3pl5_A 46 DLPESWTQENDVQVLGLTVQLDG----ITYETVGPDRLTSRVLLEKIAAGSKPTTSQVNVGQFESYFRQSAENGQEVLYI 121 (320)
T ss_dssp CCCHHHHHHHTEEEECCEEEETT----EEEESSSTTCCCHHHHHHHHHTTCCCEEECCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCHHHHHhCCeEEEeEEEEECC----EEEEcCCCCCcCHHHHHHHHhcCCCCccCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 45677788899988887677632 222333 37999999999987666666666544 44444456666666
Q ss_pred EEeCCChhhHHHHHHHHHHHHHhCCCcEEEEEeccC
Q 017971 277 IVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ 312 (363)
Q Consensus 277 ~~~~~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~ 312 (363)
-+.+.-+-.++.....-+.+..++++.....+|...
T Consensus 122 ~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~ViDS~~ 157 (320)
T 3pl5_A 122 AFSSVLSGTYQSAVMARDIVLEEYPQASIEIVDTLA 157 (320)
T ss_dssp ECCTTTCTHHHHHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred ecCchHhHHHHHHHHHHHHHHhhCCCCeEEEEcCCc
Confidence 665555555555544444455678887788888864
No 498
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=68.27 E-value=28 Score=30.30 Aligned_cols=105 Identities=10% Similarity=0.016 Sum_probs=68.8
Q ss_pred hcchhhhhhcCCCCCCeEEEEcCCCCCcccccC-CCCHHHHHHHHHhhc-CCCcccCChhhHHhhhcC-CCcEEEEEEeC
Q 017971 204 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG-PFDEEFLEEFIKQNF-LPLSVPINQDTLNLLKDD-KRKIVLAIVED 280 (363)
Q Consensus 204 ~~~~~~~~~~~~~~~p~iv~~~~~~~~~~~~~g-~~~~~~l~~fi~~~~-~p~~~~lt~~~~~~l~~~-~~~~~i~~~~~ 280 (363)
+.+++..+++++.-.|--+.+. ...+.+| +++.+++.+.+++.. .|.-.+.+...+...+.. ...++++-+.+
T Consensus 31 dL~~e~~~~~~I~vvPL~v~~~----~~~y~D~~di~~~efy~~~~~~~~~p~TSqps~~~~~~~f~~~~~~Ii~i~iSs 106 (298)
T 3jr7_A 31 EFTPEMKADGGFEHVALGIQIE----DTQWTDDDSLKQEELLLKIAESTSCAKTSCPSPERYMESYHCDAERIYVVTLSA 106 (298)
T ss_dssp CCCHHHHHHSSEEEECCEEEET----TEEEECSTTSCHHHHHHHHHHCSSCCEEECCCHHHHHHHHCSSCSEEEEEESCT
T ss_pred CCCHHHHHhCCeEEEEEEEEEC----CEEEecCCCCCHHHHHHHHHhCCCCceeCCCCHHHHHHHHHhcCCeEEEEECCc
Confidence 4567778889998888777763 2223333 578999999998754 577778888777776664 34444444444
Q ss_pred CChhhHHHHHHHHHHHHHhCCCcEEEEEeccC
Q 017971 281 ETEEKSQKLVTTLKAAASANRELVFCYVGIKQ 312 (363)
Q Consensus 281 ~~~~~~~~~~~~l~~~a~~~~~~~f~~vd~~~ 312 (363)
.-+-.++.....-+.+.+++++..+..+|...
T Consensus 107 ~LSGTy~sA~~Aa~~~~e~~~~~~I~ViDS~~ 138 (298)
T 3jr7_A 107 ELSGSYNSAVLGKNLYEEEYGEKQIHVFNSRS 138 (298)
T ss_dssp TTCSHHHHHHHHHHHHHHHHCCCEEEEEECSS
T ss_pred chhHHHHHHHHHHHHHHhhCCCCeEEEECCCc
Confidence 44444454444444455667777888888864
No 499
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=67.65 E-value=5.8 Score=28.53 Aligned_cols=60 Identities=23% Similarity=0.196 Sum_probs=48.8
Q ss_pred CeEEEEEECCCChhhhhHHHHHHHHHHHhhcCCCCeEEEEEeCccchhhhhhCCcCcCCEEE
Q 017971 61 DYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK 122 (363)
Q Consensus 61 ~~~lv~fy~~~C~~C~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 122 (363)
...|..|-+..-+.+++.-..+.++-+... +.++.+-.||..++|++++.++|-.+||++
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l--~~~y~LeVIDv~~~PelAe~~~IvAtPTLi 66 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEF--QGVYALKVIDVLKNPQLAEEDKILATPTLA 66 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHH--TTSEEEEEEETTTCCSCCTTCEEECHHHHG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhc--CCCeEEEEEEcccCHhHHhHCCeEEechhh
Confidence 355666666688888888888888766654 335999999999999999999999999965
No 500
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=67.47 E-value=9.2 Score=30.51 Aligned_cols=29 Identities=14% Similarity=0.129 Sum_probs=20.0
Q ss_pred hhHHhhcCCCC--CCCCCeEEEEeCCCCeeE
Q 017971 314 ADFADTFEANK--KSKLPKMVVWDGNENYLT 342 (363)
Q Consensus 314 ~~~~~~~gi~~--~~~~P~~vi~~~~~~y~~ 342 (363)
..+.+.||+.. ....|+++++|++|+...
T Consensus 105 ~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~ 135 (192)
T 2h01_A 105 KSIARSYDVLFNESVALRAFVLIDKQGVVQH 135 (192)
T ss_dssp SHHHHHTTCEETTTEECCEEEEECTTSBEEE
T ss_pred HHHHHHhCCcCcCCceeeEEEEEcCCCEEEE
Confidence 35777888710 115899999999996443
Done!