Query 017976
Match_columns 363
No_of_seqs 131 out of 509
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 05:04:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017976.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017976hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05705 DUF829: Eukaryotic pr 100.0 7.1E-36 1.5E-40 279.2 17.7 204 1-217 22-240 (240)
2 KOG2521 Uncharacterized conser 100.0 3.7E-32 8.1E-37 267.8 10.9 262 2-282 62-350 (350)
3 PF00326 Peptidase_S9: Prolyl 99.2 1.2E-10 2.6E-15 106.2 13.9 179 4-222 12-211 (213)
4 COG1506 DAP2 Dipeptidyl aminop 98.8 5.9E-08 1.3E-12 103.5 13.9 182 2-222 419-618 (620)
5 TIGR02427 protocat_pcaD 3-oxoa 98.7 7.1E-07 1.5E-11 79.6 15.9 60 154-218 192-251 (251)
6 PRK13604 luxD acyl transferase 98.7 2.6E-07 5.6E-12 90.9 12.4 205 3-251 61-283 (307)
7 PLN02652 hydrolase; alpha/beta 98.6 1.7E-06 3.7E-11 87.7 17.5 67 153-221 322-388 (395)
8 PLN02298 hydrolase, alpha/beta 98.6 1.9E-06 4.2E-11 83.6 16.5 65 153-219 249-316 (330)
9 KOG4391 Predicted alpha/beta h 98.6 9.9E-08 2.1E-12 89.3 7.0 175 1-222 101-284 (300)
10 PRK10566 esterase; Provisional 98.6 3.6E-06 7.8E-11 77.9 17.1 61 155-220 186-248 (249)
11 PF02230 Abhydrolase_2: Phosph 98.5 1.2E-06 2.6E-11 80.7 12.9 61 155-220 155-215 (216)
12 PHA02857 monoglyceride lipase; 98.5 4.8E-06 1E-10 78.2 16.6 65 153-220 207-273 (276)
13 PRK05077 frsA fermentation/res 98.5 7.1E-06 1.5E-10 83.6 17.5 181 3-221 219-413 (414)
14 TIGR03611 RutD pyrimidine util 98.4 3.6E-06 7.8E-11 76.0 13.2 60 154-218 197-256 (257)
15 TIGR01738 bioH putative pimelo 98.4 4.6E-06 1E-10 74.2 13.6 60 153-217 186-245 (245)
16 PF12695 Abhydrolase_5: Alpha/ 98.4 2.8E-06 6E-11 71.4 10.7 122 2-199 22-145 (145)
17 PRK10749 lysophospholipase L2; 98.4 2.1E-05 4.5E-10 77.1 18.3 67 153-219 257-328 (330)
18 PF12697 Abhydrolase_6: Alpha/ 98.4 6.7E-06 1.5E-10 71.8 13.4 54 154-212 175-228 (228)
19 COG1647 Esterase/lipase [Gener 98.4 5.8E-06 1.3E-10 77.6 13.2 65 153-219 179-243 (243)
20 PRK14875 acetoin dehydrogenase 98.3 1.5E-05 3.2E-10 77.8 15.7 58 154-219 313-370 (371)
21 COG0429 Predicted hydrolase of 98.3 1.8E-05 4E-10 78.2 14.5 193 3-219 101-339 (345)
22 PLN02385 hydrolase; alpha/beta 98.3 4.6E-05 9.9E-10 75.0 17.5 65 153-220 277-345 (349)
23 PRK11460 putative hydrolase; P 98.3 3.5E-05 7.5E-10 72.2 15.8 66 155-225 148-213 (232)
24 TIGR03695 menH_SHCHC 2-succiny 98.3 2E-05 4.4E-10 69.8 13.4 59 154-218 193-251 (251)
25 PLN02965 Probable pheophorbida 98.2 5.4E-05 1.2E-09 70.7 16.4 62 154-220 192-253 (255)
26 TIGR03343 biphenyl_bphD 2-hydr 98.2 2.7E-05 5.8E-10 72.9 14.3 60 154-218 222-281 (282)
27 PLN03087 BODYGUARD 1 domain co 98.2 6E-05 1.3E-09 78.5 17.8 63 154-220 417-479 (481)
28 PRK11126 2-succinyl-6-hydroxy- 98.2 4.6E-05 1E-09 69.6 15.2 55 154-219 187-241 (242)
29 TIGR02240 PHA_depoly_arom poly 98.2 3.3E-05 7.1E-10 72.9 14.6 63 153-221 205-267 (276)
30 TIGR01607 PST-A Plasmodium sub 98.2 9.9E-05 2.2E-09 72.8 17.6 62 155-218 270-331 (332)
31 PF01738 DLH: Dienelactone hyd 98.2 1.1E-05 2.5E-10 73.9 10.1 66 154-219 144-216 (218)
32 PRK10673 acyl-CoA esterase; Pr 98.1 0.00013 2.9E-09 67.0 16.5 61 154-219 194-254 (255)
33 TIGR03056 bchO_mg_che_rel puta 98.1 6.9E-05 1.5E-09 69.2 14.5 60 154-218 219-278 (278)
34 KOG1552 Predicted alpha/beta h 98.1 7.2E-06 1.6E-10 78.4 7.7 64 153-221 190-253 (258)
35 TIGR01836 PHA_synth_III_C poly 98.1 9.1E-05 2E-09 73.1 15.6 63 154-219 285-349 (350)
36 COG2267 PldB Lysophospholipase 98.1 0.0001 2.2E-09 72.1 15.6 67 153-222 226-296 (298)
37 PLN02511 hydrolase 98.1 8.2E-05 1.8E-09 75.0 15.4 67 153-223 296-368 (388)
38 PRK10162 acetyl esterase; Prov 98.0 0.0002 4.4E-09 70.2 16.3 191 5-220 111-315 (318)
39 TIGR01250 pro_imino_pep_2 prol 98.0 0.00043 9.4E-09 63.2 17.1 59 154-218 230-288 (288)
40 PRK00175 metX homoserine O-ace 98.0 0.00067 1.5E-08 68.0 19.6 69 153-222 307-376 (379)
41 TIGR01392 homoserO_Ac_trn homo 98.0 0.00028 6.2E-09 69.5 16.6 64 154-218 287-351 (351)
42 PRK05371 x-prolyl-dipeptidyl a 98.0 0.00022 4.9E-09 78.2 17.2 79 143-222 440-521 (767)
43 PLN02578 hydrolase 98.0 0.00031 6.8E-09 69.5 16.6 60 153-218 294-353 (354)
44 PRK06489 hypothetical protein; 98.0 0.00046 9.9E-09 68.4 17.6 62 154-221 291-358 (360)
45 KOG1455 Lysophospholipase [Lip 98.0 0.00017 3.7E-09 70.6 14.0 65 153-219 244-311 (313)
46 PRK03204 haloalkane dehalogena 97.9 0.00038 8.3E-09 66.7 15.9 58 155-217 227-285 (286)
47 PLN02679 hydrolase, alpha/beta 97.9 0.00083 1.8E-08 66.8 18.7 66 154-220 291-357 (360)
48 PRK08775 homoserine O-acetyltr 97.9 0.00055 1.2E-08 67.3 17.2 66 153-222 275-341 (343)
49 PRK10115 protease 2; Provision 97.9 0.00023 4.9E-09 77.2 15.4 173 2-213 470-665 (686)
50 TIGR03100 hydr1_PEP hydrolase, 97.9 0.00039 8.5E-09 66.5 15.2 65 154-219 206-274 (274)
51 PRK10985 putative hydrolase; P 97.9 0.00028 6.1E-09 69.0 14.3 63 153-219 253-319 (324)
52 PLN02442 S-formylglutathione h 97.9 0.00043 9.3E-09 66.8 15.3 63 154-226 216-279 (283)
53 PLN02824 hydrolase, alpha/beta 97.9 0.00066 1.4E-08 64.5 16.1 61 154-219 233-293 (294)
54 PRK00870 haloalkane dehalogena 97.8 0.00057 1.2E-08 65.4 15.4 64 153-219 237-300 (302)
55 PRK11071 esterase YqiA; Provis 97.8 0.00056 1.2E-08 62.3 14.0 55 154-218 135-189 (190)
56 PF00561 Abhydrolase_1: alpha/ 97.8 0.00027 5.9E-09 62.9 11.4 57 153-214 173-229 (230)
57 KOG1838 Alpha/beta hydrolase [ 97.8 0.00061 1.3E-08 69.4 15.1 193 3-224 151-392 (409)
58 TIGR02821 fghA_ester_D S-formy 97.8 0.00062 1.3E-08 65.1 14.1 62 155-226 211-273 (275)
59 PF07859 Abhydrolase_3: alpha/ 97.8 0.00018 3.9E-09 65.0 9.9 172 4-202 27-211 (211)
60 COG0400 Predicted esterase [Ge 97.7 0.00031 6.8E-09 65.5 10.5 61 154-220 145-205 (207)
61 TIGR01838 PHA_synth_I poly(R)- 97.7 0.0011 2.5E-08 69.9 15.9 50 153-206 413-462 (532)
62 PRK03592 haloalkane dehalogena 97.7 0.00074 1.6E-08 64.2 13.2 65 154-222 227-291 (295)
63 PLN02894 hydrolase, alpha/beta 97.6 0.0017 3.7E-08 65.8 15.7 65 154-223 324-388 (402)
64 TIGR01249 pro_imino_pep_1 prol 97.6 0.0028 6.1E-08 61.1 15.8 57 155-219 248-304 (306)
65 PF03583 LIP: Secretory lipase 97.6 0.0054 1.2E-07 59.8 17.5 63 153-219 217-280 (290)
66 KOG2382 Predicted alpha/beta h 97.5 0.00089 1.9E-08 66.1 11.1 71 144-220 243-313 (315)
67 PLN02980 2-oxoglutarate decarb 97.4 0.0035 7.5E-08 74.3 16.6 66 154-221 1567-1640(1655)
68 PRK07868 acyl-CoA synthetase; 97.4 0.0045 9.7E-08 69.8 16.1 65 153-221 295-362 (994)
69 PRK05855 short chain dehydroge 97.4 0.0024 5.3E-08 65.9 12.9 62 154-221 232-293 (582)
70 PLN02211 methyl indole-3-aceta 97.3 0.013 2.9E-07 55.9 16.9 59 155-219 211-269 (273)
71 COG0412 Dienelactone hydrolase 97.2 0.0022 4.7E-08 60.8 9.9 68 154-221 157-234 (236)
72 COG0657 Aes Esterase/lipase [L 97.1 0.013 2.7E-07 56.8 14.2 172 3-200 107-288 (312)
73 PF08840 BAAT_C: BAAT / Acyl-C 97.0 0.0017 3.7E-08 60.4 6.8 47 154-200 114-163 (213)
74 TIGR01839 PHA_synth_II poly(R) 97.0 0.026 5.7E-07 59.9 16.2 50 153-206 439-488 (560)
75 PF06500 DUF1100: Alpha/beta h 96.9 0.0049 1.1E-07 63.1 10.0 158 3-197 215-390 (411)
76 TIGR01840 esterase_phb esteras 96.8 0.0092 2E-07 54.6 10.1 28 157-184 170-197 (212)
77 PRK06765 homoserine O-acetyltr 96.6 0.0072 1.5E-07 61.4 8.2 65 154-219 322-387 (389)
78 KOG2100 Dipeptidyl aminopeptid 96.6 0.019 4.1E-07 63.2 11.9 68 156-223 682-750 (755)
79 COG3243 PhaC Poly(3-hydroxyalk 96.6 0.043 9.3E-07 56.3 13.3 65 153-221 328-400 (445)
80 PF05448 AXE1: Acetyl xylan es 96.4 0.036 7.8E-07 55.0 11.7 69 143-219 250-319 (320)
81 PRK07581 hypothetical protein; 96.4 0.01 2.2E-07 57.9 7.6 64 154-222 274-338 (339)
82 KOG3043 Predicted hydrolase re 96.3 0.032 6.9E-07 52.9 9.7 48 154-201 163-211 (242)
83 PF09752 DUF2048: Uncharacteri 96.2 0.029 6.3E-07 56.3 9.7 60 155-219 289-348 (348)
84 PRK10349 carboxylesterase BioH 95.9 0.017 3.8E-07 53.4 6.4 62 153-219 194-255 (256)
85 KOG2112 Lysophospholipase [Lip 95.9 0.069 1.5E-06 49.9 9.8 149 2-219 50-203 (206)
86 KOG2984 Predicted hydrolase [G 95.8 0.02 4.3E-07 53.8 5.9 62 153-219 214-275 (277)
87 TIGR01849 PHB_depoly_PhaZ poly 95.8 0.44 9.6E-06 49.0 16.2 66 154-219 336-405 (406)
88 COG1073 Hydrolases of the alph 95.6 0.029 6.4E-07 51.7 6.6 64 156-221 233-298 (299)
89 KOG1454 Predicted hydrolase/ac 95.6 0.039 8.6E-07 54.8 7.7 62 154-220 263-324 (326)
90 PF08538 DUF1749: Protein of u 95.5 0.059 1.3E-06 53.2 8.3 66 153-218 230-303 (303)
91 PLN03084 alpha/beta hydrolase 95.3 0.044 9.4E-07 55.6 7.1 60 154-219 324-383 (383)
92 PF05728 UPF0227: Uncharacteri 94.9 0.69 1.5E-05 42.5 13.2 54 154-217 133-186 (187)
93 PF10503 Esterase_phd: Esteras 94.7 0.25 5.4E-06 46.6 9.9 31 154-184 168-198 (220)
94 PLN02872 triacylglycerol lipas 94.6 0.11 2.4E-06 53.0 7.7 65 155-222 325-391 (395)
95 COG3545 Predicted esterase of 94.5 0.8 1.7E-05 42.0 12.2 130 23-218 42-177 (181)
96 KOG4178 Soluble epoxide hydrol 94.0 2.8 6.1E-05 41.8 15.7 63 153-220 256-320 (322)
97 COG2945 Predicted hydrolase of 93.9 0.49 1.1E-05 44.2 9.5 59 153-218 147-205 (210)
98 PF03959 FSH1: Serine hydrolas 93.8 0.25 5.5E-06 45.6 7.9 42 153-198 159-200 (212)
99 TIGR03101 hydr2_PEP hydrolase, 93.7 2.7 5.9E-05 40.6 15.0 41 155-195 201-242 (266)
100 KOG2281 Dipeptidyl aminopeptid 93.2 1.1 2.4E-05 48.5 12.1 65 155-219 802-866 (867)
101 COG3208 GrsT Predicted thioest 92.4 3.5 7.5E-05 39.7 13.2 61 153-218 174-234 (244)
102 PF10230 DUF2305: Uncharacteri 92.0 1.4 3E-05 42.4 10.3 43 155-198 221-263 (266)
103 PF08386 Abhydrolase_4: TAP-li 92.0 0.47 1E-05 39.1 6.1 60 155-219 34-93 (103)
104 KOG1515 Arylacetamide deacetyl 91.6 14 0.0003 37.1 17.2 62 156-219 269-334 (336)
105 KOG2551 Phospholipase/carboxyh 91.4 0.7 1.5E-05 43.9 7.2 67 152-226 160-226 (230)
106 COG4099 Predicted peptidase [G 91.3 0.65 1.4E-05 46.1 7.2 42 155-196 315-356 (387)
107 COG0596 MhpC Predicted hydrola 91.1 0.61 1.3E-05 40.3 6.2 60 154-217 220-279 (282)
108 PF12715 Abhydrolase_7: Abhydr 90.7 0.27 5.8E-06 50.1 4.0 57 154-213 305-369 (390)
109 KOG1553 Predicted alpha/beta h 90.3 0.58 1.3E-05 47.3 5.8 63 16-96 287-349 (517)
110 PRK10439 enterobactin/ferric e 89.7 5.1 0.00011 41.2 12.4 40 157-198 350-390 (411)
111 PF06821 Ser_hydrolase: Serine 89.0 2.4 5.1E-05 38.2 8.4 131 24-217 39-169 (171)
112 PF05677 DUF818: Chlamydia CHL 88.5 4.1 8.9E-05 41.2 10.3 52 4-55 169-230 (365)
113 COG1505 Serine proteases of th 88.3 1.4 3.1E-05 47.2 7.3 66 156-221 581-647 (648)
114 PF06342 DUF1057: Alpha/beta h 87.5 6.6 0.00014 38.7 10.9 29 154-182 211-239 (297)
115 PF00975 Thioesterase: Thioest 86.9 2 4.3E-05 38.9 6.7 58 156-219 169-227 (229)
116 COG4757 Predicted alpha/beta h 86.5 4.2 9.2E-05 39.2 8.7 64 153-218 214-278 (281)
117 TIGR00976 /NonD putative hydro 85.6 1.6 3.4E-05 46.1 6.1 77 2-96 49-136 (550)
118 KOG4627 Kynurenine formamidase 84.8 3 6.6E-05 39.6 6.8 158 3-209 94-261 (270)
119 PF06028 DUF915: Alpha/beta hy 82.6 11 0.00023 36.5 9.8 64 153-217 182-252 (255)
120 PF11187 DUF2974: Protein of u 81.2 4.2 9E-05 38.4 6.4 62 18-96 65-127 (224)
121 PF11144 DUF2920: Protein of u 78.5 8.4 0.00018 39.7 7.9 39 156-194 294-332 (403)
122 PRK04940 hypothetical protein; 78.2 56 0.0012 30.0 13.6 55 156-219 125-179 (180)
123 PRK10349 carboxylesterase BioH 77.9 4.9 0.00011 37.0 5.6 49 3-55 36-89 (256)
124 PF02129 Peptidase_S15: X-Pro 75.9 2.5 5.4E-05 40.2 3.2 77 2-96 53-140 (272)
125 KOG4667 Predicted esterase [Li 75.4 3 6.6E-05 39.8 3.4 58 153-216 197-254 (269)
126 cd00707 Pancreat_lipase_like P 74.3 3.8 8.3E-05 39.5 4.0 51 5-55 65-127 (275)
127 PF10340 DUF2424: Protein of u 74.2 82 0.0018 32.3 13.6 164 15-200 173-350 (374)
128 cd00741 Lipase Lipase. Lipase 74.0 7.5 0.00016 33.5 5.5 43 38-92 26-68 (153)
129 KOG2564 Predicted acetyltransf 72.9 5.6 0.00012 39.4 4.7 70 142-219 252-326 (343)
130 PLN00021 chlorophyllase 71.1 11 0.00023 37.3 6.3 71 154-227 188-282 (313)
131 COG4782 Uncharacterized protei 70.1 13 0.00029 37.8 6.8 82 4-94 142-236 (377)
132 COG1770 PtrB Protease II [Amin 68.5 88 0.0019 34.4 12.8 159 2-200 473-657 (682)
133 PLN02872 triacylglycerol lipas 67.2 8.3 0.00018 39.4 4.8 17 39-55 159-175 (395)
134 PF00756 Esterase: Putative es 67.1 5.5 0.00012 36.7 3.2 35 23-57 98-132 (251)
135 PF05057 DUF676: Putative seri 66.2 13 0.00028 34.5 5.5 39 23-61 58-99 (217)
136 PF06057 VirJ: Bacterial virul 63.1 14 0.00031 34.3 5.1 72 3-89 26-104 (192)
137 KOG2029 Uncharacterized conser 61.2 25 0.00055 38.1 7.1 74 15-94 496-574 (697)
138 PF05990 DUF900: Alpha/beta hy 56.6 42 0.00092 31.6 7.2 58 5-62 45-115 (233)
139 PF01764 Lipase_3: Lipase (cla 55.3 22 0.00049 29.5 4.7 22 39-60 63-84 (140)
140 COG0596 MhpC Predicted hydrola 55.2 34 0.00075 29.2 6.0 67 7-93 51-124 (282)
141 TIGR03230 lipo_lipase lipoprot 54.8 26 0.00057 36.6 5.9 51 6-56 73-135 (442)
142 PF05705 DUF829: Eukaryotic pr 54.2 7.8 0.00017 36.0 1.8 158 157-330 67-240 (240)
143 PF07819 PGAP1: PGAP1-like pro 53.8 36 0.00078 31.9 6.2 31 23-53 65-98 (225)
144 COG3319 Thioesterase domains o 51.4 48 0.001 32.1 6.8 56 22-92 49-104 (257)
145 cd00519 Lipase_3 Lipase (class 49.0 47 0.001 30.5 6.1 42 39-92 127-168 (229)
146 PF08237 PE-PPE: PE-PPE domain 49.0 60 0.0013 30.6 6.9 80 6-96 2-93 (225)
147 COG2936 Predicted acyl esteras 47.5 26 0.00057 37.7 4.6 77 2-96 76-163 (563)
148 COG3458 Acetyl esterase (deace 47.4 87 0.0019 31.1 7.8 54 144-200 248-301 (321)
149 PF04273 DUF442: Putative phos 45.9 43 0.00094 28.1 4.9 39 23-61 70-108 (110)
150 KOG3253 Predicted alpha/beta h 43.8 67 0.0014 35.2 6.8 48 154-204 303-350 (784)
151 COG4635 HemG Flavodoxin [Energ 43.3 73 0.0016 29.1 6.1 71 157-228 2-81 (175)
152 KOG1551 Uncharacterized conser 40.1 45 0.00098 33.0 4.6 59 158-221 309-367 (371)
153 COG2021 MET2 Homoserine acetyl 39.5 82 0.0018 32.2 6.5 61 154-219 305-367 (368)
154 PF00151 Lipase: Lipase; Inte 38.9 27 0.00059 34.8 3.1 51 5-55 103-165 (331)
155 PRK07581 hypothetical protein; 37.7 75 0.0016 30.8 5.9 23 31-55 116-139 (339)
156 KOG4409 Predicted hydrolase/ac 37.0 1E+02 0.0022 31.4 6.7 62 154-219 302-363 (365)
157 COG3150 Predicted esterase [Ge 36.9 3.5E+02 0.0076 25.1 9.9 52 157-218 135-187 (191)
158 COG3509 LpqC Poly(3-hydroxybut 36.4 49 0.0011 33.0 4.2 49 4-52 89-156 (312)
159 PF09497 Med12: Transcription 34.9 13 0.00028 28.5 0.1 20 309-328 36-55 (64)
160 PF06309 Torsin: Torsin; Inte 34.2 79 0.0017 27.5 4.8 20 38-57 50-71 (127)
161 PF02450 LCAT: Lecithin:choles 33.6 95 0.002 31.5 6.0 58 28-96 106-164 (389)
162 PLN02733 phosphatidylcholine-s 32.8 66 0.0014 33.5 4.8 45 39-96 161-205 (440)
163 TIGR03712 acc_sec_asp2 accesso 32.1 2.9E+02 0.0063 29.5 9.2 140 23-193 340-481 (511)
164 PF11339 DUF3141: Protein of u 31.3 64 0.0014 34.6 4.4 51 153-203 295-352 (581)
165 smart00824 PKS_TE Thioesterase 30.3 2.1E+02 0.0046 24.3 7.0 52 153-209 151-204 (212)
166 PF08357 SEFIR: SEFIR domain; 29.9 54 0.0012 28.0 3.1 53 157-213 2-55 (150)
167 KOG0622 Ornithine decarboxylas 29.2 1E+02 0.0023 32.1 5.4 44 170-217 191-234 (448)
168 PF10081 Abhydrolase_9: Alpha/ 29.0 1.4E+02 0.003 29.6 6.0 66 17-96 82-151 (289)
169 PLN02454 triacylglycerol lipas 28.5 93 0.002 32.3 5.0 33 29-61 217-249 (414)
170 KOG2624 Triglyceride lipase-ch 27.7 1.5E+02 0.0032 30.7 6.2 64 154-218 331-396 (403)
171 PF11288 DUF3089: Protein of u 27.6 1.2E+02 0.0025 28.6 5.0 42 37-89 92-134 (207)
172 PLN02408 phospholipase A1 26.3 99 0.0021 31.6 4.6 31 30-60 190-220 (365)
173 KOG0416 Ubiquitin-protein liga 25.8 57 0.0012 29.9 2.5 22 200-221 126-147 (189)
174 PF01083 Cutinase: Cutinase; 25.6 1.5E+02 0.0032 26.7 5.3 42 39-91 80-121 (179)
175 PLN03084 alpha/beta hydrolase 25.5 2.3E+02 0.005 28.7 7.2 48 3-53 150-210 (383)
176 PLN02571 triacylglycerol lipas 25.2 1.1E+02 0.0024 31.7 4.9 36 25-60 208-246 (413)
177 PF07519 Tannase: Tannase and 24.5 1.5E+02 0.0033 31.1 5.8 67 154-220 352-427 (474)
178 COG2382 Fes Enterochelin ester 24.5 4.3E+02 0.0094 26.3 8.6 46 169-221 251-296 (299)
179 PF03193 DUF258: Protein of un 24.1 94 0.002 28.0 3.6 46 2-57 8-53 (161)
180 PLN02324 triacylglycerol lipas 23.8 1.2E+02 0.0026 31.5 4.8 32 30-61 205-236 (415)
181 PF05277 DUF726: Protein of un 23.5 2.6E+02 0.0056 28.4 7.0 34 28-61 208-241 (345)
182 PF05152 DUF705: Protein of un 22.4 1E+02 0.0023 30.5 3.8 49 153-201 118-174 (297)
183 KOG4540 Putative lipase essent 21.1 1.8E+02 0.0038 29.3 5.0 52 23-96 261-312 (425)
184 COG5153 CVT17 Putative lipase 21.1 1.8E+02 0.0038 29.3 5.0 52 23-96 261-312 (425)
185 PRK10391 oriC-binding nucleoid 21.0 25 0.00054 27.5 -0.6 14 314-327 52-66 (71)
186 PF01676 Metalloenzyme: Metall 20.9 88 0.0019 29.7 3.0 44 174-218 129-172 (252)
187 PF15585 Imm46: Immunity prote 20.5 2.1E+02 0.0046 25.0 4.9 61 161-221 13-78 (129)
No 1
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=100.00 E-value=7.1e-36 Score=279.16 Aligned_cols=204 Identities=24% Similarity=0.312 Sum_probs=140.9
Q ss_pred CccccCccEEEec-----ccCCccchH-HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccc
Q 017976 1 MILFSGFDYCNIC-----RFFPEKAES-LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDD 74 (363)
Q Consensus 1 ~~~~~Gfdvl~v~-----~f~p~k~~~-~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~ 74 (363)
+|.++||+|++++ .++|.++.+ .+..+++.+.+..+....+|+||+|||||+..+..+++++.. ..+
T Consensus 22 ~Y~~~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~-------~~~ 94 (240)
T PF05705_consen 22 LYQDPGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSFLYSQLLEAYQS-------RKK 94 (240)
T ss_pred HHHhcCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHHHHHHHHHHHHh-------ccc
Confidence 3778999999998 568876665 556677666554443335999999999999777667766653 245
Q ss_pred hhhhccccceEEEcCCCCCcchhh-hhhhhccccccccCCChh--H--HHHHHHHHHhhh-chhhhccccc---hhHHHH
Q 017976 75 RQLVRDCFSGQIYDSSPVDFTSDL-GARFAVHPSVLNMSHPPR--L--VSRIANGIASGL-DAFFLNRFES---HRAEYW 145 (363)
Q Consensus 75 ~~~l~~~IkG~IlDS~P~~~~~~~-g~~~a~~p~~~k~~~pp~--l--~~~v~~~i~s~L-~~l~~~~f~~---~~~~y~ 145 (363)
+..+.++|+|+||||||+..+... ...++. + ++.... + ...+...++... ...+...... ....++
T Consensus 95 ~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (240)
T PF05705_consen 95 FGKLLPRIKGIIFDSCPGIPTYSSSARAFSA--A---LPKSSPRWFVPLWPLLQFLLRLSIISYFIFGYPDVQEYYRRAL 169 (240)
T ss_pred ccccccccceeEEeCCCCccccccHHHHHHH--H---cCccchhhHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 677888999999999999888722 222332 1 221110 0 011111111000 1111111111 112223
Q ss_pred HHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHH
Q 017976 146 QTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 217 (363)
Q Consensus 146 ~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL 217 (363)
+.+... +.++|+|||||++|++|||++||+|+++++++|.+|+.++|++|+||+|+|.||++||++|.+||
T Consensus 170 ~~~~~~-~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 170 NDFANS-PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred hhhhcC-CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 333332 56789999999999999999999999999999999999999999999999999999999999997
No 2
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.97 E-value=3.7e-32 Score=267.82 Aligned_cols=262 Identities=25% Similarity=0.379 Sum_probs=192.0
Q ss_pred ccccCccEEEec-----ccCCc----cchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHH-HHHHHhhhhhccC
Q 017976 2 ILFSGFDYCNIC-----RFFPE----KAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKV-LQITEGICEAKLS 71 (363)
Q Consensus 2 ~~~~Gfdvl~v~-----~f~p~----k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l-~qll~~~~~~~~~ 71 (363)
|.++|+.|+-+| .+|+. ..+..|...|.+|.++.+..++||+||.|||||..+++.+ ++..+.
T Consensus 62 Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~------- 134 (350)
T KOG2521|consen 62 YQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKH------- 134 (350)
T ss_pred HhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEecCCceeehHHHHHHHhhc-------
Confidence 789999999998 33444 3556888888899998888899999999999999988887 555431
Q ss_pred ccchhhhccccceEEEcCCCCCcch-hhhhhhhccccccccCCChh-HHHHHHHHHH------hhh---chhhh-----c
Q 017976 72 LDDRQLVRDCFSGQIYDSSPVDFTS-DLGARFAVHPSVLNMSHPPR-LVSRIANGIA------SGL---DAFFL-----N 135 (363)
Q Consensus 72 ~~~~~~l~~~IkG~IlDS~P~~~~~-~~g~~~a~~p~~~k~~~pp~-l~~~v~~~i~------s~L---~~l~~-----~ 135 (363)
. ...++...|+||||+|+.... ..+.+... ... |.. ...|.....- .+. ..++. .
T Consensus 135 ~---~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~----~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 205 (350)
T KOG2521|consen 135 E---PKAAQLSGGIIFDSAPARSSPVQLGWAVSF----SSP--PDDYVARWARLNYHITLLTMAGNEGGAYLLGPLAEKI 205 (350)
T ss_pred C---chhHhhcCCceEeccccccchhhhcceecc----ccC--chhhHHHHHhcCeEEEEEEeeecccchhhhhhhhhcc
Confidence 1 233344788999999998666 33321111 000 010 1111111000 000 00000 0
Q ss_pred cccchhHHHHHHhhcC-CCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHH
Q 017976 136 RFESHRAEYWQTLYSS-VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVT 214 (363)
Q Consensus 136 ~f~~~~~~y~~~L~~~-~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~ 214 (363)
.+. ....+.+.+... ....+++||+||++|.++|.+++|++++..+++|..|..++|.||+||+|+|.||..|++++.
T Consensus 206 ~~~-r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~ 284 (350)
T KOG2521|consen 206 SMS-RKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCS 284 (350)
T ss_pred ccc-cchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHH
Confidence 000 001111111111 124789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHhhhhcCCCCCCCCcCCccccccccccCCCCcccccccCCCCcccccCCccc
Q 017976 215 ELLGKAGAVYSQRIQRLEREKMGLEGTHDDMADPMYNLSKAAVSPTRSFRGTSLVPSDHFVLPSSLEY 282 (363)
Q Consensus 215 ~FL~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (363)
+|++++...+..+.+.+..+.. .|.+|++++++|++.+++.|.|+++||.++.+.|||++|+|.+|
T Consensus 285 ~Fl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~ 350 (350)
T KOG2521|consen 285 EFLRSVISSYNLKNRILGIRAD--SAGDDPLTEKICSLFQVTLNLNRSSRRSPLVLDDHLEVPSSIPY 350 (350)
T ss_pred HHHHhcccccCCccCccceeec--CCCCchHHHHHHHHHHHHhccchhhhcccccccceeeccccCCC
Confidence 9999999999999877755543 23899999999999999999999999999999999999999986
No 3
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.25 E-value=1.2e-10 Score=106.23 Aligned_cols=179 Identities=14% Similarity=0.127 Sum_probs=113.6
Q ss_pred ccCccEEEecc-------------cCCcc---chHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhh
Q 017976 4 FSGFDYCNICR-------------FFPEK---AESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICE 67 (363)
Q Consensus 4 ~~Gfdvl~v~~-------------f~p~k---~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~ 67 (363)
++||.|+.+.. ..-+. ...-....++.|.+.....+.+|.+.|+|+||.+++..+.+
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~------- 84 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ------- 84 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH-------
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc-------
Confidence 89999999971 11111 22244555666655544557799999999999754433221
Q ss_pred hccCccchhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHH-HHHHHHHhhhchhhhccccchhHHH--
Q 017976 68 AKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVS-RIANGIASGLDAFFLNRFESHRAEY-- 144 (363)
Q Consensus 68 ~~~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~-~v~~~i~s~L~~l~~~~f~~~~~~y-- 144 (363)
.++ .+++.|..+++.+........ . . +.. +.. -+..... ....|
T Consensus 85 ---~~~-------~f~a~v~~~g~~d~~~~~~~~-----~-------~-~~~~~~~---------~~~~~~~-~~~~~~~ 131 (213)
T PF00326_consen 85 ---HPD-------RFKAAVAGAGVSDLFSYYGTT-----D-------I-YTKAEYL---------EYGDPWD-NPEFYRE 131 (213)
T ss_dssp ---TCC-------GSSEEEEESE-SSTTCSBHHT-----C-------C-HHHGHHH---------HHSSTTT-SHHHHHH
T ss_pred ---cce-------eeeeeeccceecchhcccccc-----c-------c-ccccccc---------ccCccch-hhhhhhh
Confidence 111 378889999777766632220 0 0 000 000 0011100 11111
Q ss_pred HHHhhcCCC--CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhh
Q 017976 145 WQTLYSSVR--FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 145 ~~~L~~~~~--~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~ 222 (363)
+..+..... ...|.|++||++|+.||++...++++.+++.|.++++..|++..|.--...+..++.+.+.+|+++.+.
T Consensus 132 ~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 132 LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 122221112 457999999999999999999999999999999999999999999666667788999999999998764
No 4
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.80 E-value=5.9e-08 Score=103.50 Aligned_cols=182 Identities=15% Similarity=0.149 Sum_probs=118.6
Q ss_pred ccccCccEEEec-----c----c-------CCccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhh
Q 017976 2 ILFSGFDYCNIC-----R----F-------FPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGI 65 (363)
Q Consensus 2 ~~~~Gfdvl~v~-----~----f-------~p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~ 65 (363)
++.+||.|+.++ . | |-....+-..+.++.|.+.....+.+|.+.|+|.||.+++..+.+.
T Consensus 419 ~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~---- 494 (620)
T COG1506 419 LASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKT---- 494 (620)
T ss_pred HhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcC----
Confidence 578999999996 1 1 2222333444455544444444566999999999997544332211
Q ss_pred hhhccCccchhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHH
Q 017976 66 CEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYW 145 (363)
Q Consensus 66 ~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~ 145 (363)
+ ..++.|...+++++....+.... .+ +..+. . ....... ....|+
T Consensus 495 -----~---------~f~a~~~~~~~~~~~~~~~~~~~---~~--~~~~~------~---------~~~~~~~-~~~~~~ 539 (620)
T COG1506 495 -----P---------RFKAAVAVAGGVDWLLYFGESTE---GL--RFDPE------E---------NGGGPPE-DREKYE 539 (620)
T ss_pred -----c---------hhheEEeccCcchhhhhccccch---hh--cCCHH------H---------hCCCccc-ChHHHH
Confidence 1 27888888877776663322000 00 00000 0 0000000 112222
Q ss_pred H--HhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhh
Q 017976 146 Q--TLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 146 ~--~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~ 222 (363)
+ .++.....++|.|+|||++|.-||.++.+.+++.++.+|.+|+++.|++..|.=-...|-.+..+.+.+|+++.+.
T Consensus 540 ~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 540 DRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 2 2344445778999999999999999999999999999999999999999999888778888888888888888664
No 5
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.71 E-value=7.1e-07 Score=79.58 Aligned_cols=60 Identities=17% Similarity=0.361 Sum_probs=51.0
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
..+|.|+|+|++|.++|.+.++.+.+... ..+.+.++++.|..++ .+|+++.+.+.+|++
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIRGAGHIPCV-EQPEAFNAALRDFLR 251 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEECCCCCcccc-cChHHHHHHHHHHhC
Confidence 56899999999999999998887766543 3577888999999987 679999999999973
No 6
>PRK13604 luxD acyl transferase; Provisional
Probab=98.66 E-value=2.6e-07 Score=90.85 Aligned_cols=205 Identities=12% Similarity=0.129 Sum_probs=109.7
Q ss_pred cccCccEEEeccc--CCc-----------cchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhc
Q 017976 3 LFSGFDYCNICRF--FPE-----------KAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAK 69 (363)
Q Consensus 3 ~~~Gfdvl~v~~f--~p~-----------k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~ 69 (363)
.++||+|+..... .-+ .+..-+..+++++.+. ...+|+++|+||||++.+ +...
T Consensus 61 a~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~-----~~A~----- 127 (307)
T PRK13604 61 SSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAY-----EVIN----- 127 (307)
T ss_pred HHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHH-----HHhc-----
Confidence 3689999999732 111 1223555567777542 245799999999997421 1110
Q ss_pred cCccchhhhccccceEEEcCCCCCcchhhhhhhhc-cccccccCCChhH-HHH--H-HHHHHhhhchhhhccccchhHHH
Q 017976 70 LSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAV-HPSVLNMSHPPRL-VSR--I-ANGIASGLDAFFLNRFESHRAEY 144 (363)
Q Consensus 70 ~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~-~p~~~k~~~pp~l-~~~--v-~~~i~s~L~~l~~~~f~~~~~~y 144 (363)
.. .++++|.||+.++....+...+.. +..++-...|..+ ... + ...+ +...+-..+.. ....
T Consensus 128 -~~--------~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f---~~~~~~~~~~~-~~s~ 194 (307)
T PRK13604 128 -EI--------DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVF---VTDCFKHGWDT-LDST 194 (307)
T ss_pred -CC--------CCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccccccccccHHHH---HHHHHhcCccc-cccH
Confidence 11 289999999887766433221111 0000000000000 000 0 0011 01111111110 0000
Q ss_pred HHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhhhh
Q 017976 145 WQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVY 224 (363)
Q Consensus 145 ~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~~~ 224 (363)
.+.+. ....|.|+|||++|++||++.++++++.++. .+.+.+.++++.|.-+= + .-.+++|.+......
T Consensus 195 i~~~~---~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~Ga~H~l~~--~----~~~~~~~~~~~~~~~ 263 (307)
T PRK13604 195 INKMK---GLDIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLIGSSHDLGE--N----LVVLRNFYQSVTKAA 263 (307)
T ss_pred HHHHh---hcCCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeCCCccccCc--c----hHHHHHHHHHHHHHH
Confidence 12222 2347999999999999999999999998653 57889999999997543 2 245666666544332
Q ss_pred hHHHHHHhhhhcCCCCCCCCcCCcccc
Q 017976 225 SQRIQRLEREKMGLEGTHDDMADPMYN 251 (363)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (363)
+ .|+.... ....||.||--+
T Consensus 264 ---~-~~~~~~~---~~~~~~~~~~~~ 283 (307)
T PRK13604 264 ---I-ALDNGSL---DLDVDIIEPSFE 283 (307)
T ss_pred ---h-eecCCcc---cccccccCCCHH
Confidence 1 3433333 245677776544
No 7
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.62 E-value=1.7e-06 Score=87.67 Aligned_cols=67 Identities=7% Similarity=0.099 Sum_probs=58.2
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
..+.|.|+|+|++|.++|++..+++++.+.. .+++.+.++++.|.-++-.+++++.+.+.+|++..+
T Consensus 322 ~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 322 SVTVPFMVLHGTADRVTDPLASQDLYNEAAS--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhcCC--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999887543 357788899999999888899999999999999744
No 8
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.59 E-value=1.9e-06 Score=83.64 Aligned_cols=65 Identities=11% Similarity=0.133 Sum_probs=50.8
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccccc---ChHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRH---YPIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~---hPeeY~~aV~~FL~k 219 (363)
...+|.|+|+|++|.++|++..+++++.... .+.+.+.|+++.|.-++-. ..+++++.|.+|+++
T Consensus 249 ~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 249 DVSIPFIVLHGSADVVTDPDVSRALYEEAKS--EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred hcCCCEEEEecCCCCCCCHHHHHHHHHHhcc--CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999887643 3467888999888766532 235677788888877
No 9
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.59 E-value=9.9e-08 Score=89.34 Aligned_cols=175 Identities=15% Similarity=0.173 Sum_probs=113.8
Q ss_pred CccccCccEEEec--cc-----C-CccchH-HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccC
Q 017976 1 MILFSGFDYCNIC--RF-----F-PEKAES-LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLS 71 (363)
Q Consensus 1 ~~~~~Gfdvl~v~--~f-----~-p~k~~~-~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~ 71 (363)
+|-.-++||+.++ .+ . .|+++. .+..+|++|.....-....|++.|-|.||+..++..++
T Consensus 101 fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask----------- 169 (300)
T KOG4391|consen 101 FYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASK----------- 169 (300)
T ss_pred HHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeecc-----------
Confidence 4667789999997 11 2 334554 78889999987665567799999999999844422111
Q ss_pred ccchhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcC
Q 017976 72 LDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSS 151 (363)
Q Consensus 72 ~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~ 151 (363)
. .+++.|+|+..+..... +|.-|- +..+..+.+- . ..+-+.|..++. +-
T Consensus 170 ---~---~~ri~~~ivENTF~SIp--------------~~~i~~-v~p~~~k~i~-~--lc~kn~~~S~~k-----i~-- 218 (300)
T KOG4391|consen 170 ---N---SDRISAIIVENTFLSIP--------------HMAIPL-VFPFPMKYIP-L--LCYKNKWLSYRK-----IG-- 218 (300)
T ss_pred ---c---hhheeeeeeechhccch--------------hhhhhe-eccchhhHHH-H--HHHHhhhcchhh-----hc--
Confidence 1 12589999988443221 221110 0001111111 0 011122222211 11
Q ss_pred CCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhh
Q 017976 152 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 152 ~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~ 222 (363)
..+.|.|||.|.+|.+||+..+.++++..-.. ..+...|++..|...+-.+. ||+++.+|+.+...
T Consensus 219 -~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~i~dG--Yfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 219 -QCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTWICDG--YFQAIEDFLAEVVK 284 (300)
T ss_pred -cccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCCccCceEEecc--HHHHHHHHHHHhcc
Confidence 35689999999999999999999999886432 45688899999999998876 99999999987544
No 10
>PRK10566 esterase; Provisional
Probab=98.57 E-value=3.6e-06 Score=77.87 Aligned_cols=61 Identities=18% Similarity=0.189 Sum_probs=52.1
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCC--ceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGA--DVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~--~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
..|.|++++++|+++|++..+++++.+++.|. +++.+.++++.|.- .+ +..+++.+||++.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~----~~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRI----TP-EALDAGVAFFRQH 248 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCcc----CH-HHHHHHHHHHHhh
Confidence 47999999999999999999999999988886 47888899999963 24 4578899999875
No 11
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.54 E-value=1.2e-06 Score=80.73 Aligned_cols=61 Identities=23% Similarity=0.339 Sum_probs=50.1
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
+.|.+++||++|+++|.+..++.++.+++.|.+|+...|++..|-- ..+..+.+.+||++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-----~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-----SPEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-----CHHHHHHHHHHHhhh
Confidence 5799999999999999999999999999999999999999998854 356668899999875
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=98.52 E-value=4.8e-06 Score=78.24 Aligned_cols=65 Identities=14% Similarity=0.192 Sum_probs=55.3
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccC--hHhHHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY--PIDYKAAVTELLGKA 220 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~h--PeeY~~aV~~FL~ka 220 (363)
..++|.|+++|++|.++|++..+++++.... +++...++++.|.-|.-.. .++.++.+.+|+++.
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999876532 5788889999999997643 788899999999885
No 13
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.47 E-value=7.1e-06 Score=83.63 Aligned_cols=181 Identities=17% Similarity=0.072 Sum_probs=99.4
Q ss_pred cccCccEEEeccc-------CCc--cchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCcc
Q 017976 3 LFSGFDYCNICRF-------FPE--KAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLD 73 (363)
Q Consensus 3 ~~~Gfdvl~v~~f-------~p~--k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~ 73 (363)
.++||+|+++..- ++. ........+++.|.........+|.+.|+|+||...+ .+... ..
T Consensus 219 a~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al----~~A~~------~p- 287 (414)
T PRK05077 219 APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAV----RLAYL------EP- 287 (414)
T ss_pred HhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHH----HHHHh------CC-
Confidence 4789999999832 111 1112445677776544333567999999999997433 21110 11
Q ss_pred chhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHh-hhc--hh--hhccccchhHHHHHHh
Q 017976 74 DRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIAS-GLD--AF--FLNRFESHRAEYWQTL 148 (363)
Q Consensus 74 ~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s-~L~--~l--~~~~f~~~~~~y~~~L 148 (363)
++|+++|..+++..........+. .++ ......+...+.. ..+ .+ .+..+... . +.+
T Consensus 288 ------~ri~a~V~~~~~~~~~~~~~~~~~------~~p--~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~-~---~~~ 349 (414)
T PRK05077 288 ------PRLKAVACLGPVVHTLLTDPKRQQ------QVP--EMYLDVLASRLGMHDASDEALRVELNRYSLK-V---QGL 349 (414)
T ss_pred ------cCceEEEEECCccchhhcchhhhh------hch--HHHHHHHHHHhCCCCCChHHHHHHhhhccch-h---hhh
Confidence 148999999977642221100000 010 0000011110000 000 00 00000000 0 011
Q ss_pred hcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 149 YSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 149 ~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
.. ...++|.|+|+|++|+++|.++.+.+++.. .+.+++.+++++| -..+++....+.+||++.+
T Consensus 350 l~-~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~~~~l~~i~~~~~----~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 350 LG-RRCPTPMLSGYWKNDPFSPEEDSRLIASSS----ADGKLLEIPFKPV----YRNFDKALQEISDWLEDRL 413 (414)
T ss_pred hc-cCCCCcEEEEecCCCCCCCHHHHHHHHHhC----CCCeEEEccCCCc----cCCHHHHHHHHHHHHHHHh
Confidence 11 235689999999999999999999776443 2456777888743 3588999999999998754
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.45 E-value=3.6e-06 Score=76.01 Aligned_cols=60 Identities=23% Similarity=0.374 Sum_probs=50.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
...|.|+++|++|.++|++..+++++... .++.+.++++.|.-+ -.+|+++.+.|.+|++
T Consensus 197 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 197 IQHPVLLIANRDDMLVPYTQSLRLAAALP----NAQLKLLPYGGHASN-VTDPETFNRALLDFLK 256 (257)
T ss_pred cCccEEEEecCcCcccCHHHHHHHHHhcC----CceEEEECCCCCCcc-ccCHHHHHHHHHHHhc
Confidence 56899999999999999999888776543 456777899999965 4799999999999986
No 15
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.44 E-value=4.6e-06 Score=74.23 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=50.8
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 217 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL 217 (363)
..++|.|+++|++|.++|.+..+.+.+... .++.+.+++++|..++ ++|+++-+.|.+|+
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP----HSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC----CCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 456899999999999999988777665432 5778889999999888 68999999999985
No 16
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.41 E-value=2.8e-06 Score=71.42 Aligned_cols=122 Identities=14% Similarity=0.135 Sum_probs=81.0
Q ss_pred ccccCccEEEeccc--CCccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhc
Q 017976 2 ILFSGFDYCNICRF--FPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVR 79 (363)
Q Consensus 2 ~~~~Gfdvl~v~~f--~p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~ 79 (363)
+.++||.|+++..= -.......+..+++.+.+... ...+|++.|+|+||..++.... . +
T Consensus 22 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~----~------~-------- 82 (145)
T PF12695_consen 22 LAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGYP-DPDRIILIGHSMGGAIAANLAA----R------N-------- 82 (145)
T ss_dssp HHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHHC-TCCEEEEEEETHHHHHHHHHHH----H------S--------
T ss_pred HHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhcC-CCCcEEEEEEccCcHHHHHHhh----h------c--------
Confidence 35689999999732 111222355666666543333 5779999999999974442221 1 1
Q ss_pred cccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcCCCCCCcEE
Q 017976 80 DCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYL 159 (363)
Q Consensus 80 ~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~~~~~P~L 159 (363)
++|+++|+-+++ . .. ..+. ..+.|.|
T Consensus 83 ~~v~~~v~~~~~----~----------~~-------------------------------------~~~~---~~~~pv~ 108 (145)
T PF12695_consen 83 PRVKAVVLLSPY----P----------DS-------------------------------------EDLA---KIRIPVL 108 (145)
T ss_dssp TTESEEEEESES----S----------GC-------------------------------------HHHT---TTTSEEE
T ss_pred cceeEEEEecCc----c----------ch-------------------------------------hhhh---ccCCcEE
Confidence 148999999841 0 00 0011 1335999
Q ss_pred EEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcc
Q 017976 160 ILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHV 199 (363)
Q Consensus 160 yLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV 199 (363)
+++|+.|+++|.+.++++++.++ .+.+.+.++++.|.
T Consensus 109 ~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 109 FIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp EEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred EEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 99999999999999999998876 57899999999994
No 17
>PRK10749 lysophospholipase L2; Provisional
Probab=98.41 E-value=2.1e-05 Score=77.06 Aligned_cols=67 Identities=13% Similarity=0.184 Sum_probs=56.5
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCC---CceEEEEcCCCCcccccccC--hHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLG---ADVKLVKWNSSPHVGHYRHY--PIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G---~~V~~~~Fe~S~HV~H~r~h--PeeY~~aV~~FL~k 219 (363)
....|.|+|+|++|.++|++..+.+++..++.| .+++.+.++++.|.-+.-.+ .++.++.|.+|+++
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 456899999999999999999999998887654 35688999999999887554 67788889999875
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.40 E-value=6.7e-06 Score=71.79 Aligned_cols=54 Identities=24% Similarity=0.370 Sum_probs=43.8
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAA 212 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~a 212 (363)
.+.|.|+++|++|.++|.+.++++.+.. ..++.+.++++.|..++. +|++..++
T Consensus 175 ~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~-~p~~~~~a 228 (228)
T PF12697_consen 175 IKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVVIPGAGHFLFLE-QPDEVAEA 228 (228)
T ss_dssp SSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEETTSSSTHHHH-SHHHHHHH
T ss_pred cCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCccHHH-CHHHHhcC
Confidence 4689999999999999977777776543 358899999999998875 88876543
No 19
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.39 E-value=5.8e-06 Score=77.64 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=58.2
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
....|.+++-+++|++||.+..+-+++.... .+.++..+++|.||--.-.-.|.-.++|-+||++
T Consensus 179 ~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 179 KIYSPTLVVQGRQDEMVPAESANFIYDHVES--DDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred hcccchhheecccCCCCCHHHHHHHHHhccC--CcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 3568999999999999999999999988753 3688999999999999999999999999999974
No 20
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.35 E-value=1.5e-05 Score=77.84 Aligned_cols=58 Identities=21% Similarity=0.347 Sum_probs=47.9
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
.++|.|+++|++|.++|++..+.+. ..++.+.++++.|..++ .+|++..+.|.+|+++
T Consensus 313 i~~Pvlii~g~~D~~vp~~~~~~l~-------~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 313 LAIPVLVIWGEQDRIIPAAHAQGLP-------DGVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCCEEEEEECCCCccCHHHHhhcc-------CCCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 5689999999999999988765432 24778889999997665 6899999999999975
No 21
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.28 E-value=1.8e-05 Score=78.21 Aligned_cols=193 Identities=18% Similarity=0.235 Sum_probs=109.4
Q ss_pred cccCccEEEec------------ccCCccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhcc
Q 017976 3 LFSGFDYCNIC------------RFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKL 70 (363)
Q Consensus 3 ~~~Gfdvl~v~------------~f~p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~ 70 (363)
.++||.|+++. .++.......+..+|+.+.+.. .++++.+.|||+||. .++..+.+. +.
T Consensus 101 ~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~--~~r~~~avG~SLGgn----mLa~ylgee--g~- 171 (345)
T COG0429 101 SRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARF--PPRPLYAVGFSLGGN----MLANYLGEE--GD- 171 (345)
T ss_pred HhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhC--CCCceEEEEecccHH----HHHHHHHhh--cc-
Confidence 36899999996 1233333346666777776544 488999999999995 233333221 21
Q ss_pred CccchhhhccccceEEEcCCCCCcchhhhhhhhcccccc-ccCCChhHHHHHHHHHHhhh--------------------
Q 017976 71 SLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVL-NMSHPPRLVSRIANGIASGL-------------------- 129 (363)
Q Consensus 71 ~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~-k~~~pp~l~~~v~~~i~s~L-------------------- 129 (363)
+.+ +.+.+.=|.|.|+.. .+.++.. +.. ++- ...+.+.+.+.+..-+
T Consensus 172 d~~--------~~aa~~vs~P~Dl~~-~~~~l~~--~~s~~ly-~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~t 239 (345)
T COG0429 172 DLP--------LDAAVAVSAPFDLEA-CAYRLDS--GFSLRLY-SRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRT 239 (345)
T ss_pred Ccc--------cceeeeeeCHHHHHH-HHHHhcC--chhhhhh-HHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhch
Confidence 222 566666677776633 2222221 110 110 0111122222221111
Q ss_pred ----chhhhcccc--chhHHHHHHhh---cCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccc
Q 017976 130 ----DAFFLNRFE--SHRAEYWQTLY---SSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVG 200 (363)
Q Consensus 130 ----~~l~~~~f~--~~~~~y~~~L~---~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~ 200 (363)
|.++..+.. +...+||++.- --....+|.|+||+++|++++.++|.+.... ....|.+...+..+|||
T Consensus 240 i~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvG 316 (345)
T COG0429 240 IREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVG 316 (345)
T ss_pred HHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEE
Confidence 111111100 13346776522 1125678999999999999999998887754 45679999999999999
Q ss_pred cccc---ChH-hHHHHHHHHHHH
Q 017976 201 HYRH---YPI-DYKAAVTELLGK 219 (363)
Q Consensus 201 H~r~---hPe-eY~~aV~~FL~k 219 (363)
-+.. ||. ==++++-+|++.
T Consensus 317 fl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 317 FLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred eccCccccchhhHHHHHHHHHHH
Confidence 8873 443 113456666654
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.28 E-value=4.6e-05 Score=75.01 Aligned_cols=65 Identities=20% Similarity=0.190 Sum_probs=50.5
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHh----HHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPID----YKAAVTELLGKA 220 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPee----Y~~aV~~FL~ka 220 (363)
...+|.|+|+|++|.++|.+..+++++.+.. .+++.+.++++.|.-+. ..|++ ..+.+.+||++.
T Consensus 277 ~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~-e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 277 EVSLPLLILHGEADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILE-GEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred cCCCCEEEEEeCCCCccChHHHHHHHHHcCC--CCceEEEeCCCeeeccc-CCChhhHHHHHHHHHHHHHHh
Confidence 3578999999999999999999998876642 35778889999997544 56766 556677777754
No 23
>PRK11460 putative hydrolase; Provisional
Probab=98.27 E-value=3.5e-05 Score=72.23 Aligned_cols=66 Identities=14% Similarity=0.032 Sum_probs=57.6
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhhhhh
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYS 225 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~~~~ 225 (363)
..|.|++||++|++||++..+++++.+++.|.+++.+.+++..|.= ..+..+.+.+|+++.+..-.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i-----~~~~~~~~~~~l~~~l~~~~ 213 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI-----DPRLMQFALDRLRYTVPKRY 213 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC-----CHHHHHHHHHHHHHHcchhh
Confidence 4699999999999999999999999999999999999999999974 35677888888888776544
No 24
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.26 E-value=2e-05 Score=69.77 Aligned_cols=59 Identities=25% Similarity=0.372 Sum_probs=45.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
..+|.|+|++++|.+++ + ..+.+.+....++.+.++++.|..++ .+|++..+.+.+|++
T Consensus 193 ~~~P~l~i~g~~D~~~~-~----~~~~~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 193 LTIPVLYLCGEKDEKFV-Q----IAKEMQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFLE 251 (251)
T ss_pred CCCceEEEeeCcchHHH-H----HHHHHHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHhC
Confidence 56899999999998763 2 33344444456788888999999887 569999999999973
No 25
>PLN02965 Probable pheophorbidase
Probab=98.24 E-value=5.4e-05 Score=70.74 Aligned_cols=62 Identities=10% Similarity=0.056 Sum_probs=52.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
...|.|+|++++|.++|.+..+.+++... ..+.+.++++.|.-|+ .+|++..++|.+|++..
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~----~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP----PAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC----cceEEEecCCCCchhh-cCHHHHHHHHHHHHHHh
Confidence 57899999999999999987777765543 3567888999999988 89999999999998764
No 26
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.24 E-value=2.7e-05 Score=72.86 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=51.2
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
..+|.|+|+|+.|.++|.+..+++++.+. .++.+.++++.|.- +..+|++..++|.+|++
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~~i~~agH~~-~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLHVFSRCGHWA-QWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEEEeCCCCcCC-cccCHHHHHHHHHHHhh
Confidence 56899999999999999988887776543 47778889999995 56899999999999986
No 27
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.23 E-value=6e-05 Score=78.54 Aligned_cols=63 Identities=13% Similarity=0.257 Sum_probs=55.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
..+|.|+|+|++|.++|.+..+.+++... +++.+.+++++|..++..+|++|.+.+.+||+..
T Consensus 417 I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 417 LKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 56899999999999999999888765543 4788899999999999999999999999999764
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.23 E-value=4.6e-05 Score=69.62 Aligned_cols=55 Identities=25% Similarity=0.435 Sum_probs=44.3
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
..+|.|+|+|++|.++. ..++. . ..+.+.++++.|.-++ ++|+++.+.|.+|+++
T Consensus 187 i~~P~lii~G~~D~~~~-----~~~~~---~--~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 187 LTFPFYYLCGERDSKFQ-----ALAQQ---L--ALPLHVIPNAGHNAHR-ENPAAFAASLAQILRL 241 (242)
T ss_pred cCCCeEEEEeCCcchHH-----HHHHH---h--cCeEEEeCCCCCchhh-hChHHHHHHHHHHHhh
Confidence 56899999999998552 22221 1 5788889999998886 8899999999999986
No 29
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.22 E-value=3.3e-05 Score=72.92 Aligned_cols=63 Identities=17% Similarity=0.251 Sum_probs=50.9
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
...+|.|+|+|+.|.++|.+..+++.+... ..+.+.+++ .|.-|. .+|+++.++|.+|+++..
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~----~~~~~~i~~-gH~~~~-e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIP----NAELHIIDD-GHLFLI-TRAEAVAPIIMKFLAEER 267 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCC----CCEEEEEcC-CCchhh-ccHHHHHHHHHHHHHHhh
Confidence 356899999999999999999988886653 234555565 898776 799999999999998743
No 30
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.19 E-value=9.9e-05 Score=72.77 Aligned_cols=62 Identities=18% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
..|.|+|+|++|.+++++..+++++.+.. .+++.+.++++.|.-+.-.++++..+.+.+|++
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 57999999999999999999988876542 357788899999999998889999999999985
No 31
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.18 E-value=1.1e-05 Score=73.89 Aligned_cols=66 Identities=23% Similarity=0.275 Sum_probs=48.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccCh-------HhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYP-------IDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hP-------eeY~~aV~~FL~k 219 (363)
..+|.|++++++|+++|.+.++++.+.+++.|.+++.+.|++..|-=..+..+ ++-|+.+.+|+++
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 45799999999999999999999999999999999999999999976666655 3335555555554
No 32
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.14 E-value=0.00013 Score=67.02 Aligned_cols=61 Identities=11% Similarity=0.123 Sum_probs=50.1
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
..+|.|+|+++.|.+++.+..+.+.+.. .+++.+.++++.|.-+ -.+|+++.+.|.+|+++
T Consensus 194 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 194 WPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIAGAGHWVH-AEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCCCeee-ccCHHHHHHHHHHHHhc
Confidence 4689999999999999987777665543 3577788899999665 56799999999999975
No 33
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.13 E-value=6.9e-05 Score=69.22 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=49.6
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
..+|.|+|++++|.++|.+.++++.+... .++.+.++++.|.-++ .+|+++.+.|.+|++
T Consensus 219 i~~P~lii~g~~D~~vp~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 219 ITIPLHLIAGEEDKAVPPDESKRAATRVP----TATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred CCCCEEEEEeCCCcccCHHHHHHHHHhcc----CCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 46899999999999999998888775543 3567778999997665 579999999999974
No 34
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.12 E-value=7.2e-06 Score=78.43 Aligned_cols=64 Identities=14% Similarity=0.173 Sum_probs=52.2
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
...+|+|++||++|++||+..=.++++.++++ ++-..-++..|+...+. .+|.+.+.+|+....
T Consensus 190 ~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~~~--~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 190 KITCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIELY--PEYIEHLRRFISSVL 253 (258)
T ss_pred eccCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCcccccC--HHHHHHHHHHHHHhc
Confidence 45689999999999999999999999998864 44444568999887654 469999999987543
No 35
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.11 E-value=9.1e-05 Score=73.11 Aligned_cols=63 Identities=19% Similarity=0.283 Sum_probs=51.0
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccC--hHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY--PIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~h--PeeY~~aV~~FL~k 219 (363)
..+|.|+++|+.|.++|++.++.+++... +.+++.+.++ +.|.+.+..- +++=|.+|.+|+++
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVS--SEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcC--CCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 46899999999999999999998887653 2356666665 8999988765 58888999999864
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.10 E-value=0.0001 Score=72.13 Aligned_cols=67 Identities=19% Similarity=0.170 Sum_probs=56.1
Q ss_pred CCCCcEEEEEeCCCCccCh-HHHHHHHHHHHhCCC-ceEEEEcCCCCcccccccCh--HhHHHHHHHHHHHHhh
Q 017976 153 RFGAPYLILCSEDDDLAPY-QVIYNFAQRLCDLGA-DVKLVKWNSSPHVGHYRHYP--IDYKAAVTELLGKAGA 222 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~-~~Ve~~a~~~r~~G~-~V~~~~Fe~S~HV~H~r~hP--eeY~~aV~~FL~ka~~ 222 (363)
....|.|++++++|.++++ +...++++.+ |. +++.+.++++-|--|.-.+. +++++.+.+|+.+...
T Consensus 226 ~~~~PvLll~g~~D~vv~~~~~~~~~~~~~---~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 226 AIALPVLLLQGGDDRVVDNVEGLARFFERA---GSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred cccCCEEEEecCCCccccCcHHHHHHHHhc---CCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 4578999999999999995 6666665544 43 47999999999999999999 9999999999988653
No 37
>PLN02511 hydrolase
Probab=98.10 E-value=8.2e-05 Score=75.02 Aligned_cols=67 Identities=21% Similarity=0.225 Sum_probs=49.6
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHh------HHHHHHHHHHHHhhh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPID------YKAAVTELLGKAGAV 223 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPee------Y~~aV~~FL~ka~~~ 223 (363)
..++|.|+|+|++|+++|.+.+.... .+....++++..++++|++++-. |+. +.+.|.+|++.....
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~---~~~~p~~~l~~~~~gGH~~~~E~-p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPRED---IKANPNCLLIVTPSGGHLGWVAG-PEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhH---HhcCCCEEEEECCCcceeccccC-CCCCCCCccHHHHHHHHHHHHHHh
Confidence 46789999999999999987653211 12334688999999999999854 544 468888999875433
No 38
>PRK10162 acetyl esterase; Provisional
Probab=98.03 E-value=0.0002 Score=70.17 Aligned_cols=191 Identities=14% Similarity=0.073 Sum_probs=100.4
Q ss_pred cCccEEEec-cc-----CCccchHHHHHHHHHHHH---HhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccch
Q 017976 5 SGFDYCNIC-RF-----FPEKAESLALDVLKELVE---ELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDR 75 (363)
Q Consensus 5 ~Gfdvl~v~-~f-----~p~k~~~~A~~vL~~L~~---~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~ 75 (363)
.|+.|+++. -. +|. +..-+..+++++.+ .....+.+|++.|.|+||..++....++-+. +. .
T Consensus 111 ~g~~Vv~vdYrlape~~~p~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~--~~--~---- 181 (318)
T PRK10162 111 SGCTVIGIDYTLSPEARFPQ-AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK--QI--D---- 181 (318)
T ss_pred cCCEEEEecCCCCCCCCCCC-cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc--CC--C----
Confidence 488999887 12 333 23344556666554 3344567999999999998665443332110 00 0
Q ss_pred hhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcCC-CC
Q 017976 76 QLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSV-RF 154 (363)
Q Consensus 76 ~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~-~~ 154 (363)
...++++|+-++..+........... ... ... ...-..|+....+ ...-... .-+...+.... ..
T Consensus 182 ---~~~~~~~vl~~p~~~~~~~~s~~~~~-~~~-~~l-~~~~~~~~~~~y~-------~~~~~~~-~p~~~p~~~~l~~~ 247 (318)
T PRK10162 182 ---CGKVAGVLLWYGLYGLRDSVSRRLLG-GVW-DGL-TQQDLQMYEEAYL-------SNDADRE-SPYYCLFNNDLTRD 247 (318)
T ss_pred ---ccChhheEEECCccCCCCChhHHHhC-CCc-ccc-CHHHHHHHHHHhC-------CCccccC-CcccCcchhhhhcC
Confidence 12478999888655543211110000 000 000 0111122222111 0000000 00001111100 11
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccC-hH---hHHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY-PI---DYKAAVTELLGKA 220 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~h-Pe---eY~~aV~~FL~ka 220 (363)
-.|.++++++.|.+.+ +.+.+++.+++.|.+|+.+.|++..|.=..... -+ +-++.+.+|+++.
T Consensus 248 lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 248 VPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred CCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 2499999999999975 789999999999999999999999997543322 12 3334445555554
No 39
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.01 E-value=0.00043 Score=63.18 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=47.1
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
.++|.|+++|+.|.+ +.+..+..++... .++.+.++++.|.-++ .+|+++.+.|.+|++
T Consensus 230 i~~P~lii~G~~D~~-~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 230 IKVPTLLTVGEFDTM-TPEAAREMQELIA----GSRLVVFPDGSHMTMI-EDPEVYFKLLSDFIR 288 (288)
T ss_pred cCCCEEEEecCCCcc-CHHHHHHHHHhcc----CCeEEEeCCCCCCccc-CCHHHHHHHHHHHhC
Confidence 568999999999985 5667666554432 4567788999999888 589999999999974
No 40
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.00 E-value=0.00067 Score=67.97 Aligned_cols=69 Identities=23% Similarity=0.245 Sum_probs=59.3
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcC-CCCcccccccChHhHHHHHHHHHHHHhh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWN-SSPHVGHYRHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe-~S~HV~H~r~hPeeY~~aV~~FL~ka~~ 222 (363)
...+|.|+|+++.|.++|.+..+++++.....+..++.+.++ ++.|..++ .+|+++-++|.+||+++..
T Consensus 307 ~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 307 RIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL-LDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred cCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-cCHHHHHHHHHHHHHhhhh
Confidence 356899999999999999999999998887666667777664 89999776 8999999999999998653
No 41
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=97.99 E-value=0.00028 Score=69.54 Aligned_cols=64 Identities=20% Similarity=0.177 Sum_probs=52.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEE-EcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLV-KWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~-~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
.++|.|+|+++.|.++|.+.++++++...+....|+.+ .++++.|..++ .+|+++.++|.+||+
T Consensus 287 I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 287 IKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred CCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-cCHHHHHHHHHHHhC
Confidence 46899999999999999999999998887543333333 45689999988 789999999999974
No 42
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.99 E-value=0.00022 Score=78.20 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=62.3
Q ss_pred HHHHHhh---cCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 143 EYWQTLY---SSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 143 ~y~~~L~---~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
+||+..+ ......+|.|+++|..|..++.+...++++.++++|.+++++.. ...|+.-....+.+|.+.+.+|+.+
T Consensus 440 ~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 440 DFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVYPNNWQSIDFRDTMNAWFTH 518 (767)
T ss_pred HHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccCCCchhHHHHHHHHHHHHHh
Confidence 4665532 22256799999999999999999999999999988888888765 5568766566678999999999987
Q ss_pred Hhh
Q 017976 220 AGA 222 (363)
Q Consensus 220 a~~ 222 (363)
.+.
T Consensus 519 ~Lk 521 (767)
T PRK05371 519 KLL 521 (767)
T ss_pred ccc
Confidence 543
No 43
>PLN02578 hydrolase
Probab=97.98 E-value=0.00031 Score=69.50 Aligned_cols=60 Identities=20% Similarity=0.223 Sum_probs=48.0
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
...+|.|+|+|+.|.++|.+..+++.+... + .+.+.. ++.|+-|. ++|+++.++|.+|++
T Consensus 294 ~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p--~--a~l~~i-~~GH~~~~-e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 294 KLSCPLLLLWGDLDPWVGPAKAEKIKAFYP--D--TTLVNL-QAGHCPHD-EVPEQVNKALLEWLS 353 (354)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--C--CEEEEe-CCCCCccc-cCHHHHHHHHHHHHh
Confidence 357899999999999999998887766542 2 344445 58999875 699999999999986
No 44
>PRK06489 hypothetical protein; Provisional
Probab=97.97 E-value=0.00046 Score=68.41 Aligned_cols=62 Identities=26% Similarity=0.222 Sum_probs=50.0
Q ss_pred CCCcEEEEEeCCCCccChHHH--HHHHHHHHhCCCceEEEEcCCC----CcccccccChHhHHHHHHHHHHHHh
Q 017976 154 FGAPYLILCSEDDDLAPYQVI--YNFAQRLCDLGADVKLVKWNSS----PHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~V--e~~a~~~r~~G~~V~~~~Fe~S----~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
.++|.|+|+|+.|.++|.+.. +.+++... +.+.+.++++ .|+-| .+|++|.++|.+|++++.
T Consensus 291 I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 291 IKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT--GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred CCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 568999999999999998864 55554432 3578888986 99875 699999999999998653
No 45
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.96 E-value=0.00017 Score=70.58 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=55.7
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccc---ccChHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY---RHYPIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~---r~hPeeY~~aV~~FL~k 219 (363)
....|.|++||++|.++.++..+++++.+... +.+.+.+++.-|.-|. -.+-+.+.+.|.++|++
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 46689999999999999999999999998754 8899999999999996 45566777888887764
No 46
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.94 E-value=0.00038 Score=66.66 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=46.6
Q ss_pred CCcEEEEEeCCCCccChHH-HHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQV-IYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 217 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~-Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL 217 (363)
.+|.|+|+|+.|.++|+.. .+.+.+.. ...+.+.++++.|.-|+ ++|++..+.|.+|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i----p~~~~~~i~~aGH~~~~-e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF----PDHVLVELPNAKHFIQE-DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc----CCCeEEEcCCCcccccc-cCHHHHHHHHHHhc
Confidence 6899999999999997654 34444332 24678889999999887 79999999999997
No 47
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.93 E-value=0.00083 Score=66.78 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=52.5
Q ss_pred CCCcEEEEEeCCCCccChHH-HHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQV-IYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~-Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
..+|.|+|+|+.|.++|.+. +.+.++.+.+.-.+++.+.++++.|.-|. ++|++..+.|.+|+++.
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~-E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD-DRPDLVHEKLLPWLAQL 357 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc-cCHHHHHHHHHHHHHhc
Confidence 46899999999999999874 33444444443346888999999999776 67999999999999863
No 48
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.93 E-value=0.00055 Score=67.29 Aligned_cols=66 Identities=21% Similarity=0.231 Sum_probs=54.0
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCC-CCcccccccChHhHHHHHHHHHHHHhh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS-SPHVGHYRHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~-S~HV~H~r~hPeeY~~aV~~FL~ka~~ 222 (363)
...+|.|+|+++.|.++|.+.++++++... ...+.+.+++ +.|..++ .+|++..+.|.+|++++-.
T Consensus 275 ~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~---p~a~l~~i~~~aGH~~~l-E~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 275 AIRVPTVVVAVEGDRLVPLADLVELAEGLG---PRGSLRVLRSPYGHDAFL-KETDRIDAILTTALRSTGE 341 (343)
T ss_pred cCCCCeEEEEeCCCEeeCHHHHHHHHHHcC---CCCeEEEEeCCccHHHHh-cCHHHHHHHHHHHHHhccc
Confidence 356899999999999999998888765542 2467888874 8998888 5899999999999987643
No 49
>PRK10115 protease 2; Provisional
Probab=97.91 E-value=0.00023 Score=77.21 Aligned_cols=173 Identities=18% Similarity=0.110 Sum_probs=102.6
Q ss_pred ccccCccEEEecc-----c---CCcc--------chHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhh
Q 017976 2 ILFSGFDYCNICR-----F---FPEK--------AESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGI 65 (363)
Q Consensus 2 ~~~~Gfdvl~v~~-----f---~p~k--------~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~ 65 (363)
++++||=|+.++. | |-+. .-.-.....+.|++..-..+.+|.++|-|+||.+.. .++..
T Consensus 470 l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~----~~~~~- 544 (686)
T PRK10115 470 LLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMG----VAINQ- 544 (686)
T ss_pred HHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHH----HHHhc-
Confidence 5789999999971 1 2221 112333456667766555677999999999996333 33321
Q ss_pred hhhccCccchhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHH
Q 017976 66 CEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYW 145 (363)
Q Consensus 66 ~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~ 145 (363)
.++ ..++.|...+..|....... +.+ + . ...|.. -++........+|+
T Consensus 545 -----~Pd-------lf~A~v~~vp~~D~~~~~~~-----~~~---p--~-~~~~~~---------e~G~p~~~~~~~~l 592 (686)
T PRK10115 545 -----RPE-------LFHGVIAQVPFVDVVTTMLD-----ESI---P--L-TTGEFE---------EWGNPQDPQYYEYM 592 (686)
T ss_pred -----Chh-------heeEEEecCCchhHhhhccc-----CCC---C--C-ChhHHH---------HhCCCCCHHHHHHH
Confidence 112 37888888877766542111 010 1 0 111111 11222211111121
Q ss_pred H---HhhcCCCCCCcE-EEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEc---CCCCcccccccChHhHHHHH
Q 017976 146 Q---TLYSSVRFGAPY-LILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW---NSSPHVGHYRHYPIDYKAAV 213 (363)
Q Consensus 146 ~---~L~~~~~~~~P~-LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~F---e~S~HV~H~r~hPeeY~~aV 213 (363)
. -+.+-.....|. |+++|.+|+-||+.+.++++++++++|.+++.+.+ .+++|- ...+..++++.+
T Consensus 593 ~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg--~~~~r~~~~~~~ 665 (686)
T PRK10115 593 KSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG--GKSGRFKSYEGV 665 (686)
T ss_pred HHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC--CCcCHHHHHHHH
Confidence 1 112222346785 56699999999999999999999999999888888 788887 445555555554
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.90 E-value=0.00039 Score=66.45 Aligned_cols=65 Identities=22% Similarity=0.201 Sum_probs=49.0
Q ss_pred CCCcEEEEEeCCCCccChHHHHHH--HHHHHh-CC-CceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNF--AQRLCD-LG-ADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~--a~~~r~-~G-~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
.+.|.|++||..|..++ +..+.+ .+.+++ .+ ..|+.+.++++.|+-+....+++..+.|.+||++
T Consensus 206 ~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 206 FQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred cCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 36899999999999853 222110 133333 23 5799999999999999999999999999999963
No 51
>PRK10985 putative hydrolase; Provisional
Probab=97.89 E-value=0.00028 Score=68.96 Aligned_cols=63 Identities=21% Similarity=0.232 Sum_probs=45.7
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccC--hHhHH--HHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY--PIDYK--AAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~h--PeeY~--~aV~~FL~k 219 (363)
..+.|.|+|+|++|.++|.+.++...+ ....++.+.++++.|+.++... +.++| +.|.+|++.
T Consensus 253 ~i~~P~lii~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 253 QIRKPTLIIHAKDDPFMTHEVIPKPES----LPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred CCCCCEEEEecCCCCCCChhhChHHHH----hCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 456899999999999999887776532 2235788899999999999642 22333 456666654
No 52
>PLN02442 S-formylglutathione hydrolase
Probab=97.89 E-value=0.00043 Score=66.79 Aligned_cols=63 Identities=22% Similarity=0.139 Sum_probs=52.6
Q ss_pred CCCcEEEEEeCCCCccChH-HHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhhhhhH
Q 017976 154 FGAPYLILCSEDDDLAPYQ-VIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQ 226 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~-~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~~~~~ 226 (363)
...|.|+++|++|+++|.. ..+.+++.+++.|.+++...+++..|. |..+..|+++.+.-+.+
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~----------~~~~~~~i~~~~~~~~~ 279 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS----------YFFIATFIDDHINHHAQ 279 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc----------HHHHHHHHHHHHHHHHH
Confidence 5679999999999999974 478899999999999999999999997 44788888776655444
No 53
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.87 E-value=0.00066 Score=64.51 Aligned_cols=61 Identities=16% Similarity=0.231 Sum_probs=50.4
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
..+|.|+|+|++|.++|.+..+.+.+ .....+.+.++++.|.-|+ ++|++..+.|.+|+++
T Consensus 233 i~~P~lvi~G~~D~~~~~~~~~~~~~----~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 233 VKCPVLIAWGEKDPWEPVELGRAYAN----FDAVEDFIVLPGVGHCPQD-EAPELVNPLIESFVAR 293 (294)
T ss_pred cCCCeEEEEecCCCCCChHHHHHHHh----cCCccceEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 56899999999999999987766432 2233567888999999887 8899999999999975
No 54
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.85 E-value=0.00057 Score=65.41 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=49.7
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
...+|.|+|+|+.|.++|.+. +++.+...+. ..+..+.++++.|.-| -++|++..+.|.+|+++
T Consensus 237 ~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 237 RWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFLQ-EDSGEELAEAVLEFIRA 300 (302)
T ss_pred cCCCceEEEecCCCCcccCch-HHHHhhcccc-cccceeeecCCCccch-hhChHHHHHHHHHHHhc
Confidence 357899999999999999866 6666554321 1244667899999975 58899999999999975
No 55
>PRK11071 esterase YqiA; Provisional
Probab=97.82 E-value=0.00056 Score=62.31 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=45.3
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
.+.|.++|++++|++||++...++++.+ .....+++.|.= .+.++|++.+.+|++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~ggdH~f---~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEEGGNHAF---VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEECCCCcch---hhHHHhHHHHHHHhc
Confidence 4568889999999999999999999853 233558888876 667999999999975
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.79 E-value=0.00027 Score=62.93 Aligned_cols=57 Identities=25% Similarity=0.354 Sum_probs=45.0
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVT 214 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~ 214 (363)
....|.|+++++.|.++|++.++.+.+... ..+.+.+++++|..+ -.+|++..+.|.
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~GH~~~-~~~~~~~~~~i~ 229 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGSGHFAF-LEGPDEFNEIII 229 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTCCSTHH-HHSHHHHHHHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCCChHHH-hcCHHhhhhhhc
Confidence 467899999999999999999998664433 388889999999884 456666666654
No 57
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=97.79 E-value=0.00061 Score=69.38 Aligned_cols=193 Identities=17% Similarity=0.200 Sum_probs=110.8
Q ss_pred cccCccEEEec------------ccCCccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhcc
Q 017976 3 LFSGFDYCNIC------------RFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKL 70 (363)
Q Consensus 3 ~~~Gfdvl~v~------------~f~p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~ 70 (363)
+.+||.|++++ .++...-...-..+++.+.+..+ ..+++..||||||.+....+++- ++
T Consensus 151 ~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~------g~- 221 (409)
T KOG1838|consen 151 QRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEE------GD- 221 (409)
T ss_pred HhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhc------cC-
Confidence 46899999997 12233333355568878777664 55999999999997444333332 11
Q ss_pred CccchhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhH-HHHHHHHHHh----------------------
Q 017976 71 SLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRL-VSRIANGIAS---------------------- 127 (363)
Q Consensus 71 ~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l-~~~v~~~i~s---------------------- 127 (363)
+.+ -+.|+++.+ |-|... ......++. .+.+ -+.++..+..
T Consensus 222 ~~~-------l~~a~~v~~-Pwd~~~--~~~~~~~~~------~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~ 285 (409)
T KOG1838|consen 222 NTP-------LIAAVAVCN-PWDLLA--ASRSIETPL------YRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKS 285 (409)
T ss_pred CCC-------ceeEEEEec-cchhhh--hhhHHhccc------chHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhc
Confidence 111 268888888 656431 000000000 0000 1111111100
Q ss_pred ----hhchhhh---ccccchhHHHHHH---hhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCC
Q 017976 128 ----GLDAFFL---NRFESHRAEYWQT---LYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSP 197 (363)
Q Consensus 128 ----~L~~l~~---~~f~~~~~~y~~~---L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~ 197 (363)
-+|..+. -.|. ...+||+. ++.-...+.|.|+|.+.+|+++|.+.|- ++.+++ +..|-++.-.-.+
T Consensus 286 ~SvreFD~~~t~~~~gf~-~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip--~~~~~~-np~v~l~~T~~GG 361 (409)
T KOG1838|consen 286 RSVREFDEALTRPMFGFK-SVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIP--IDDIKS-NPNVLLVITSHGG 361 (409)
T ss_pred CcHHHHHhhhhhhhcCCC-cHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCC--HHHHhc-CCcEEEEEeCCCc
Confidence 0011110 1122 23467754 2222357899999999999999987543 233333 3367777777888
Q ss_pred ccccccc---ChHhHHHH-HHHHHHHHhhhh
Q 017976 198 HVGHYRH---YPIDYKAA-VTELLGKAGAVY 224 (363)
Q Consensus 198 HV~H~r~---hPeeY~~a-V~~FL~ka~~~~ 224 (363)
|+|=+.. .+..|.+. +.+||.++....
T Consensus 362 Hlgfleg~~p~~~~w~~~~l~ef~~~~~~~~ 392 (409)
T KOG1838|consen 362 HLGFLEGLWPSARTWMDKLLVEFLGNAIFQD 392 (409)
T ss_pred eeeeeccCCCccchhHHHHHHHHHHHHHhhh
Confidence 8888888 78888888 999999876553
No 58
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.77 E-value=0.00062 Score=65.13 Aligned_cols=62 Identities=13% Similarity=0.038 Sum_probs=49.3
Q ss_pred CCcEEEEEeCCCCccCh-HHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhhhhhH
Q 017976 155 GAPYLILCSEDDDLAPY-QVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQ 226 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~-~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~~~~~ 226 (363)
..|.++.||+.|+++|. ...+.+.+.+++.|.+++...+++..|. |..+..|+.+++.-+.+
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~----------f~~~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHS----------YYFIASFIADHLRHHAE 273 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCcc----------chhHHHhHHHHHHHHHh
Confidence 45888889999999999 5788999999999999999999999997 34455556555554443
No 59
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.77 E-value=0.00018 Score=64.96 Aligned_cols=172 Identities=22% Similarity=0.190 Sum_probs=94.7
Q ss_pred ccCccEEEec-ccCCcc----chHHHHHHHHHHHHH---hcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccch
Q 017976 4 FSGFDYCNIC-RFFPEK----AESLALDVLKELVEE---LKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDR 75 (363)
Q Consensus 4 ~~Gfdvl~v~-~f~p~k----~~~~A~~vL~~L~~~---~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~ 75 (363)
++|+.|+++. -+.|+. ...-+...++++.+. ......+|++.|.|.||..++.......+. ..
T Consensus 27 ~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~------~~--- 97 (211)
T PF07859_consen 27 ERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR------GL--- 97 (211)
T ss_dssp HHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT------TT---
T ss_pred hccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh------cc---
Confidence 3799999997 233543 223555567677665 233466999999999998666444333221 00
Q ss_pred hhhccccceEEEcCCCCCc-ch-hhhh--hhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhc-
Q 017976 76 QLVRDCFSGQIYDSSPVDF-TS-DLGA--RFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYS- 150 (363)
Q Consensus 76 ~~l~~~IkG~IlDS~P~~~-~~-~~g~--~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~- 150 (363)
..++++|+=|+..++ .. .... ....... .+. +.....++...... ..... ..+...+..
T Consensus 98 ----~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~--------~~~~~-~~~~sp~~~~ 161 (211)
T PF07859_consen 98 ----PKPKGIILISPWTDLQDFDGPSYDDSNENKDD--PFL-PAPKIDWFWKLYLP--------GSDRD-DPLASPLNAS 161 (211)
T ss_dssp ----CHESEEEEESCHSSTSTSSCHHHHHHHHHSTT--SSS-BHHHHHHHHHHHHS--------TGGTT-STTTSGGGSS
T ss_pred ----cchhhhhcccccccchhccccccccccccccc--ccc-cccccccccccccc--------ccccc-cccccccccc
Confidence 127898888865555 22 0111 0000000 011 11122222222211 10000 001111221
Q ss_pred CCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccc
Q 017976 151 SVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY 202 (363)
Q Consensus 151 ~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~ 202 (363)
....-.|.++++|+.|.++ ++.+.+++++++.|.+|+.+.+++..|+=+|
T Consensus 162 ~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~~ 211 (211)
T PF07859_consen 162 DLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFFM 211 (211)
T ss_dssp CCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGGG
T ss_pred ccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEeeC
Confidence 1112248899999999986 4779999999999999999999999997543
No 60
>COG0400 Predicted esterase [General function prediction only]
Probab=97.69 E-value=0.00031 Score=65.55 Aligned_cols=61 Identities=25% Similarity=0.332 Sum_probs=50.4
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
...|.|++|++.|++||....+++.+.+++.|.+|+.+.++ ..|- -.+++ .+++.+||.+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~----i~~e~-~~~~~~wl~~~ 205 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHE----IPPEE-LEAARSWLANT 205 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCc----CCHHH-HHHHHHHHHhc
Confidence 45799999999999999999999999999999999999887 6663 23444 46777788764
No 61
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.69 E-value=0.0011 Score=69.91 Aligned_cols=50 Identities=28% Similarity=0.444 Sum_probs=39.8
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccCh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYP 206 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hP 206 (363)
..++|.|+|.|+.|.++|++.++...+.. + ..+...+++++|+.|+-.-|
T Consensus 413 ~I~vPvLvV~G~~D~IvP~~sa~~l~~~i---~-~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 413 KVKVPVYIIATREDHIAPWQSAYRGAALL---G-GPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hCCCCEEEEeeCCCCcCCHHHHHHHHHHC---C-CCEEEEECCCCCchHhhCCC
Confidence 35789999999999999999998776543 4 34566789999999875544
No 62
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.68 E-value=0.00074 Score=64.23 Aligned_cols=65 Identities=14% Similarity=0.255 Sum_probs=51.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhh
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~ 222 (363)
..+|.|+|+|++|.+++.....+.+...-. ..+.+.++++.|.-|+ ++|++--+++.+|++++..
T Consensus 227 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 227 SDVPKLLINAEPGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQE-DSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CCCCeEEEeccCCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhh-cCHHHHHHHHHHHHHHhcc
Confidence 478999999999999966666665544321 3667788999999996 6899999999999987654
No 63
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.63 E-value=0.0017 Score=65.85 Aligned_cols=65 Identities=12% Similarity=0.135 Sum_probs=49.8
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhhh
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAV 223 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~~ 223 (363)
..+|.|+|||+.|.+++ +..++..+. .+..++.+.++++.|.-|+ .+|+++-++|.+|++..+..
T Consensus 324 I~vP~liI~G~~D~i~~-~~~~~~~~~---~~~~~~~~~i~~aGH~~~~-E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 324 WKVPTTFIYGRHDWMNY-EGAVEARKR---MKVPCEIIRVPQGGHFVFL-DNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred CCCCEEEEEeCCCCCCc-HHHHHHHHH---cCCCCcEEEeCCCCCeeec-cCHHHHHHHHHHHHHHhccC
Confidence 56899999999998876 455544433 3445788889999997554 59999999999999865544
No 64
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.58 E-value=0.0028 Score=61.12 Aligned_cols=57 Identities=21% Similarity=0.264 Sum_probs=43.2
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
.+|.|+|+++.|.++|.+..+++++... ..+.+.++++.|.. .+|+.. ++|.+|++.
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~---~~~~~~-~~i~~~~~~ 304 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSA---FDPNNL-AALVHALET 304 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCC---CChHHH-HHHHHHHHH
Confidence 4799999999999999999888876643 35677778777665 477766 666666654
No 65
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.56 E-value=0.0054 Score=59.81 Aligned_cols=63 Identities=22% Similarity=0.321 Sum_probs=52.9
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCC-CceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLG-ADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G-~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
....|.++.+|..|++||+...+++++++.++| .+|+.+......|.......-. ....|+.+
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~----~a~~Wl~~ 280 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAP----DALAWLDD 280 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcH----HHHHHHHH
Confidence 346899999999999999999999999999999 7999999999999987655543 33455554
No 66
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.50 E-value=0.00089 Score=66.10 Aligned_cols=71 Identities=17% Similarity=0.366 Sum_probs=55.9
Q ss_pred HHHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 144 YWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 144 y~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
||..+.+ .+...|.|++.+..+..+|-+...+...... .++.+.+++++|.=|. +.|++..+.|.+|++..
T Consensus 243 ~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp----~~e~~~ld~aGHwVh~-E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 243 YWADLED-GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP----NVEVHELDEAGHWVHL-EKPEEFIESISEFLEEP 313 (315)
T ss_pred ccccccc-cccccceeEEecCCCCCcChhHHHHHHHhcc----chheeecccCCceeec-CCHHHHHHHHHHHhccc
Confidence 4555555 3566799999999999999876555554433 4888888999999887 67999999999999864
No 67
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.42 E-value=0.0035 Score=74.27 Aligned_cols=66 Identities=18% Similarity=0.290 Sum_probs=51.3
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhC---C-----CceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDL---G-----ADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~---G-----~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
..+|.|+|+|+.|.+++ +..+++.+...+. + ..++.+.++++.|.-|+ .+|+++.++|.+||++..
T Consensus 1567 I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-E~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1567 CDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-ENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred CCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH-HCHHHHHHHHHHHHHhcc
Confidence 56899999999999886 4555555443221 0 13688899999999987 889999999999999754
No 68
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.36 E-value=0.0045 Score=69.78 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=52.6
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEE-EEcCCCCccccc--ccChHhHHHHHHHHHHHHh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKL-VKWNSSPHVGHY--RHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~-~~Fe~S~HV~H~--r~hPeeY~~aV~~FL~ka~ 221 (363)
...+|.|+|+|+.|.++|++.++.+.+... ..+. +.++++.|.+++ +.-|++=|-.|.+||++..
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~----~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRGIRRAAP----NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 355899999999999999999999876542 2333 566899999998 5678999999999999643
No 69
>PRK05855 short chain dehydrogenase; Validated
Probab=97.36 E-value=0.0024 Score=65.95 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=49.8
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
..+|.|+|++++|.++|.+..+.+.+... ..+.+.++ +.|..|+ .+|+++.+.|.+|+++..
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWVP----RLWRREIK-AGHWLPM-SHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccCC----cceEEEcc-CCCcchh-hChhHHHHHHHHHHHhcc
Confidence 56899999999999999988887764432 24556665 6899884 689999999999999754
No 70
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.34 E-value=0.013 Score=55.91 Aligned_cols=59 Identities=10% Similarity=0.109 Sum_probs=46.1
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
..|.|||++++|.++|++..+.+++... |. +.+..+ +.|.-++ .+|++-.+.|.++...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~--~~~~l~-~gH~p~l-s~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP--PS--QVYELE-SDHSPFF-STPFLLFGLLIKAAAS 269 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC--cc--EEEEEC-CCCCccc-cCHHHHHHHHHHHHHH
Confidence 5699999999999999998888776543 33 455555 7898877 8999988888877554
No 71
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.22 E-value=0.0022 Score=60.80 Aligned_cols=68 Identities=19% Similarity=0.139 Sum_probs=53.1
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccc-------ccCh---HhHHHHHHHHHHHHh
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY-------RHYP---IDYKAAVTELLGKAG 221 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~-------r~hP---eeY~~aV~~FL~ka~ 221 (363)
.++|.|+++++.|..+|.+.++.+.+.+++.+.+++.+.|.+..|.=.- .-++ ++=|++|.+|+++.+
T Consensus 157 ~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 157 IKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred ccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999999999999999999997775432 2222 233566667766543
No 72
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.10 E-value=0.013 Score=56.84 Aligned_cols=172 Identities=19% Similarity=0.101 Sum_probs=95.3
Q ss_pred cccCccEEEec------ccCCccchHHHHHHHHHHHHH---hcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCcc
Q 017976 3 LFSGFDYCNIC------RFFPEKAESLALDVLKELVEE---LKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLD 73 (363)
Q Consensus 3 ~~~Gfdvl~v~------~f~p~k~~~~A~~vL~~L~~~---~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~ 73 (363)
...|+-|+++. +-||..-. -+...+..+.+. ....+.+|.+.|.|.||...+... +..... +
T Consensus 107 ~~~g~~vv~vdYrlaPe~~~p~~~~-d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a-~~~~~~-~------ 177 (312)
T COG0657 107 AAAGAVVVSVDYRLAPEHPFPAALE-DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALA-LAARDR-G------ 177 (312)
T ss_pred HHcCCEEEecCCCCCCCCCCCchHH-HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHH-HHHHhc-C------
Confidence 45799999998 22555433 344455555543 445688999999999997544332 222211 1
Q ss_pred chhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcCC-
Q 017976 74 DRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSV- 152 (363)
Q Consensus 74 ~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~- 152 (363)
.+...++|+-|+-.+.+. ........ ..........+..|+..... .........+...++...
T Consensus 178 -----~~~p~~~~li~P~~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~p~~spl~~~~~ 242 (312)
T COG0657 178 -----LPLPAAQVLISPLLDLTS-SAASLPGY-GEADLLDAAAILAWFADLYL--------GAAPDREDPEASPLASDDL 242 (312)
T ss_pred -----CCCceEEEEEecccCCcc-cccchhhc-CCccccCHHHHHHHHHHHhC--------cCccccCCCccCccccccc
Confidence 113688899885546554 11000000 00000101111223322221 100000000111122221
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccc
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVG 200 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~ 200 (363)
..-.|.+++.++.|.+.+ +.+.+++.+++.|..++...|++..|.=
T Consensus 243 ~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f 288 (312)
T COG0657 243 SGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGF 288 (312)
T ss_pred cCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceec
Confidence 113589999999999999 8899999999999999999999999933
No 73
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.01 E-value=0.0017 Score=60.37 Aligned_cols=47 Identities=23% Similarity=0.377 Sum_probs=30.9
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHH-HHHhCCCc--eEEEEcCCCCccc
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQ-RLCDLGAD--VKLVKWNSSPHVG 200 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~-~~r~~G~~--V~~~~Fe~S~HV~ 200 (363)
..+|.|+|.|++|.+.|....-+.+. ++++.|.. ++.+.+++++|.-
T Consensus 114 i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 114 IKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred cCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 46899999999999999888776654 46666765 8888899888864
No 74
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.00 E-value=0.026 Score=59.92 Aligned_cols=50 Identities=20% Similarity=0.383 Sum_probs=40.1
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccCh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYP 206 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hP 206 (363)
...+|.|.+.++.|.++||+.+....+. .|.+++.+.. .|+|++-.-.-|
T Consensus 439 ~I~~Pvl~va~~~DHIvPw~s~~~~~~l---~gs~~~fvl~-~gGHIggivnpP 488 (560)
T TIGR01839 439 KVKCDSFSVAGTNDHITPWDAVYRSALL---LGGKRRFVLS-NSGHIQSILNPP 488 (560)
T ss_pred cCCCCeEEEecCcCCcCCHHHHHHHHHH---cCCCeEEEec-CCCccccccCCC
Confidence 4679999999999999999999988765 3557776654 888998775544
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.95 E-value=0.0049 Score=63.08 Aligned_cols=158 Identities=22% Similarity=0.179 Sum_probs=78.7
Q ss_pred cccCccEEEecc----c---CCc--cchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCcc
Q 017976 3 LFSGFDYCNICR----F---FPE--KAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLD 73 (363)
Q Consensus 3 ~~~Gfdvl~v~~----f---~p~--k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~ 73 (363)
..+|+.+|++.+ . ||- ...++-..||++|.........+|.+.|||+||.... .++. + +.
T Consensus 215 ~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~Av-RlA~-l--------e~- 283 (411)
T PF06500_consen 215 APRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAV-RLAA-L--------ED- 283 (411)
T ss_dssp HHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH-HHHH-H--------TT-
T ss_pred HhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHH-HHHH-h--------cc-
Confidence 469999999971 1 222 2235778899998766556677999999999996222 1211 1 11
Q ss_pred chhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhch-------h--hhccccchhHHH
Q 017976 74 DRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDA-------F--FLNRFESHRAEY 144 (363)
Q Consensus 74 ~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~-------l--~~~~f~~~~~~y 144 (363)
++|+|+|--.+++.-.+.-...+ .++ |.+.. -.+++-+-. + -+..|.-.
T Consensus 284 ------~RlkavV~~Ga~vh~~ft~~~~~------~~~---P~my~---d~LA~rlG~~~~~~~~l~~el~~~SLk---- 341 (411)
T PF06500_consen 284 ------PRLKAVVALGAPVHHFFTDPEWQ------QRV---PDMYL---DVLASRLGMAAVSDESLRGELNKFSLK---- 341 (411)
T ss_dssp ------TT-SEEEEES---SCGGH-HHHH------TTS----HHHH---HHHHHHCT-SCE-HHHHHHHGGGGSTT----
T ss_pred ------cceeeEeeeCchHhhhhccHHHH------hcC---CHHHH---HHHHHHhCCccCCHHHHHHHHHhcCcc----
Confidence 25999999998765554211111 122 22211 122221100 0 00111100
Q ss_pred HHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCC
Q 017976 145 WQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSP 197 (363)
Q Consensus 145 ~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~ 197 (363)
-+-+.+.....+|.|.+++++|+++|.+|..-++.. +.+-+...|+..+
T Consensus 342 ~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~----s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 342 TQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES----STDGKALRIPSKP 390 (411)
T ss_dssp TTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT----BTT-EEEEE-SSS
T ss_pred hhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc----CCCCceeecCCCc
Confidence 022332334678999999999999999997766643 3334455555544
No 76
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.84 E-value=0.0092 Score=54.61 Aligned_cols=28 Identities=4% Similarity=-0.054 Sum_probs=25.4
Q ss_pred cEEEEEeCCCCccChHHHHHHHHHHHhC
Q 017976 157 PYLILCSEDDDLAPYQVIYNFAQRLCDL 184 (363)
Q Consensus 157 P~LyLYSk~D~lVP~~~Ve~~a~~~r~~ 184 (363)
|.+++||++|++||.+..+++++.+++.
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 4568999999999999999999999875
No 77
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=96.59 E-value=0.0072 Score=61.42 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=57.6
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCC-CCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS-SPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~-S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
.++|.|+|+++.|.++|.+..+++++...+.|.+++.+.+++ ..|..++ .+|+++.+.|.+|+++
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 578999999999999999999999888876666788888885 8999988 6999999999999975
No 78
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.58 E-value=0.019 Score=63.20 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=59.7
Q ss_pred CcE-EEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhhh
Q 017976 156 APY-LILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAV 223 (363)
Q Consensus 156 ~P~-LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~~ 223 (363)
.|. |+|||+.|+-|+.+.--.+++.++.+|.+.++..|+++.|-=-.+..-..+...+..|+..|+..
T Consensus 682 ~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 682 TPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 344 99999999999999999999999999999999999999998877776677778888888877653
No 79
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.56 E-value=0.043 Score=56.29 Aligned_cols=65 Identities=28% Similarity=0.384 Sum_probs=50.2
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChH----hHHH----HHHHHHHHHh
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI----DYKA----AVTELLGKAG 221 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPe----eY~~----aV~~FL~ka~ 221 (363)
...+|.+.+++++|.++||++|...+.. .|.+|+.+.. +|+|.+-+-.||. +||- ....++.++-
T Consensus 328 ~It~pvy~~a~~~DhI~P~~Sv~~g~~l---~~g~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 328 DITCPVYNLAAEEDHIAPWSSVYLGARL---LGGEVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred hcccceEEEeecccccCCHHHHHHHHHh---cCCceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 4679999999999999999998877744 4667877764 9999999988775 4665 5555555543
No 80
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.43 E-value=0.036 Score=54.98 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=47.7
Q ss_pred HHHHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhH-HHHHHHHHHH
Q 017976 143 EYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDY-KAAVTELLGK 219 (363)
Q Consensus 143 ~y~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY-~~aV~~FL~k 219 (363)
.|++.+|-....++|.|+-.|-.|++||+..+-..++.+. .+.+++.++...|-. +.++ +++..+|+++
T Consensus 250 ~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~---~~K~l~vyp~~~He~-----~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 250 SYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP---GPKELVVYPEYGHEY-----GPEFQEDKQLNFLKE 319 (320)
T ss_dssp HTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC-----SSEEEEEETT--SST-----THHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC---CCeeEEeccCcCCCc-----hhhHHHHHHHHHHhc
Confidence 3556666555678999999999999999999999998774 468999999888843 3444 7888888875
No 81
>PRK07581 hypothetical protein; Validated
Probab=96.39 E-value=0.01 Score=57.94 Aligned_cols=64 Identities=16% Similarity=0.007 Sum_probs=53.3
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCC-CCcccccccChHhHHHHHHHHHHHHhh
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS-SPHVGHYRHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~-S~HV~H~r~hPeeY~~aV~~FL~ka~~ 222 (363)
..+|.|+|+|+.|.++|.+..+.+++... +.+.+.+++ +.|..++ ..|+++.+.|.+|+++.++
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~ip----~a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALIP----NAELRPIESIWGHLAGF-GQNPADIAFIDAALKELLA 338 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHHHh
Confidence 56899999999999999998887765542 357777898 8998876 7788999999999998764
No 82
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.27 E-value=0.032 Score=52.92 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=38.6
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCC-ceEEEEcCCCCcccc
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGA-DVKLVKWNSSPHVGH 201 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~-~V~~~~Fe~S~HV~H 201 (363)
..+|.|+|+++.|.++|.+++.++=+..+++-. .-+.+.|++-.|-=-
T Consensus 163 vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 163 VKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred CCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 568999999999999999999998888876421 245788999888533
No 83
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.21 E-value=0.029 Score=56.30 Aligned_cols=60 Identities=13% Similarity=0.338 Sum_probs=50.0
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
.....+++.++|..||...+.++.+.|. |.+|+.+ +++||+.|-.|.+-|.++|.+.+++
T Consensus 289 p~~ii~V~A~~DaYVPr~~v~~Lq~~WP--GsEvR~l---~gGHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 289 PSAIIFVAAKNDAYVPRHGVLSLQEIWP--GSEVRYL---PGGHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred CCcEEEEEecCceEechhhcchHHHhCC--CCeEEEe---cCCcEEEeeechHHHHHHHHHHhhC
Confidence 3467789999999999999998887775 6655553 6699999999999999999988763
No 84
>PRK10349 carboxylesterase BioH; Provisional
Probab=95.93 E-value=0.017 Score=53.45 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=50.4
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
...+|.|+|+|+.|.++|.+..+.+.+... ..+.+.++++.|.-++ ++|++..++|.+|-++
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAKAAHAPFI-SHPAEFCHLLVALKQR 255 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC----CCeEEEeCCCCCCccc-cCHHHHHHHHHHHhcc
Confidence 356899999999999999887665554432 4567888999998888 7999999999998653
No 85
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.86 E-value=0.069 Score=49.93 Aligned_cols=149 Identities=19% Similarity=0.217 Sum_probs=89.1
Q ss_pred ccccCccEEEecccC--CccchHHHHHHHHHHHHHhc---CCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchh
Q 017976 2 ILFSGFDYCNICRFF--PEKAESLALDVLKELVEELK---FGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQ 76 (363)
Q Consensus 2 ~~~~Gfdvl~v~~f~--p~k~~~~A~~vL~~L~~~~~---~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~ 76 (363)
.+.-+||++-++--. .+.+..-+...+..|.++.. ....+|++-|||+||+..+|..... +.
T Consensus 50 ~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~---------~~---- 116 (206)
T KOG2112|consen 50 FMNAWFDIMELSSDAPEDEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTY---------PK---- 116 (206)
T ss_pred cccceecceeeCcccchhhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcc---------cc----
Confidence 345578999988332 33344466666667665433 2355899999999998776664322 00
Q ss_pred hhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcCCCCCC
Q 017976 77 LVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGA 156 (363)
Q Consensus 77 ~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~~~~~ 156 (363)
-.+-|++-.+-......+ + ..+... + ...
T Consensus 117 -----~l~G~~~~s~~~p~~~~~--------------------------------~--~~~~~~----~--------~~~ 145 (206)
T KOG2112|consen 117 -----ALGGIFALSGFLPRASIG--------------------------------L--PGWLPG----V--------NYT 145 (206)
T ss_pred -----ccceeeccccccccchhh--------------------------------c--cCCccc----c--------Ccc
Confidence 123344441110000000 0 000000 0 035
Q ss_pred cEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 157 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 157 P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
|.+..|++.|++||.+--++..+.+++.|..++.+-|++-.| +- -|+| ...|..|+++
T Consensus 146 ~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h---~~-~~~e-~~~~~~~~~~ 203 (206)
T KOG2112|consen 146 PILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGH---ST-SPQE-LDDLKSWIKT 203 (206)
T ss_pred hhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccc---cc-cHHH-HHHHHHHHHH
Confidence 899999999999999999999999999988866666665555 32 3444 3667777766
No 86
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=95.78 E-value=0.02 Score=53.84 Aligned_cols=62 Identities=21% Similarity=0.265 Sum_probs=49.7
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
..++|.|+++++.|++|+-..|. ++...+ .+ .+.+.++...|--|+| +++++-+.|.+|+++
T Consensus 214 ~vkcPtli~hG~kDp~~~~~hv~-fi~~~~-~~--a~~~~~peGkHn~hLr-ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 214 QVKCPTLIMHGGKDPFCGDPHVC-FIPVLK-SL--AKVEIHPEGKHNFHLR-YAKEFNKLVLDFLKS 275 (277)
T ss_pred cccCCeeEeeCCcCCCCCCCCcc-chhhhc-cc--ceEEEccCCCcceeee-chHHHHHHHHHHHhc
Confidence 46799999999999999987754 333332 23 4566779999999987 799999999999986
No 87
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=95.76 E-value=0.44 Score=48.97 Aligned_cols=66 Identities=12% Similarity=0.128 Sum_probs=54.5
Q ss_pred CC-CcEEEEEeCCCCccChHHHHHHHHHHHhCCC-ceEEEEcCCCCccccc--ccChHhHHHHHHHHHHH
Q 017976 154 FG-APYLILCSEDDDLAPYQVIYNFAQRLCDLGA-DVKLVKWNSSPHVGHY--RHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~-~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~-~V~~~~Fe~S~HV~H~--r~hPeeY~~aV~~FL~k 219 (363)
.+ +|.|.+.++.|+++|+...+...+.....+. +.......+.+|.|-+ +.-+++=|-.|.+||.+
T Consensus 336 I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 336 ITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred CcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 44 8999999999999999999999988755443 4556667789999988 56688888999999875
No 88
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.65 E-value=0.029 Score=51.73 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=56.1
Q ss_pred CcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChH--hHHHHHHHHHHHHh
Q 017976 156 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI--DYKAAVTELLGKAG 221 (363)
Q Consensus 156 ~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPe--eY~~aV~~FL~ka~ 221 (363)
.|.|+++|..|.+||....+++++.++.. ......+++..|..-+...+. +|+..+.+|+++.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 69999999999999999999999998765 577777888889888877775 99999999998754
No 89
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.60 E-value=0.039 Score=54.76 Aligned_cols=62 Identities=19% Similarity=0.463 Sum_probs=52.8
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka 220 (363)
..+|.|+++|+.|.++|.+..+++.++ . ..++.+..+++.|+-|+ .-|+++-+.+..||..+
T Consensus 263 ~~~pvlii~G~~D~~~p~~~~~~~~~~---~-pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 263 WKCPVLIIWGDKDQIVPLELAEELKKK---L-PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARL 324 (326)
T ss_pred cCCceEEEEcCcCCccCHHHHHHHHhh---C-CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHh
Confidence 348999999999999999955555433 3 56788888999999999 99999999999999875
No 90
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=95.48 E-value=0.059 Score=53.20 Aligned_cols=66 Identities=15% Similarity=0.032 Sum_probs=9.0
Q ss_pred CCCCcEEEEEeCCCCccCh-HHHHHHHHHHHhC-C---CceEEEEcCCCCcccccccChH---hHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPY-QVIYNFAQRLCDL-G---ADVKLVKWNSSPHVGHYRHYPI---DYKAAVTELLG 218 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~-~~Ve~~a~~~r~~-G---~~V~~~~Fe~S~HV~H~r~hPe---eY~~aV~~FL~ 218 (363)
....|.|+|||.+|+.||. -+.++++++|++. + +.-.....+++.|.--=....+ .-.+.|.+||+
T Consensus 230 ~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 230 KVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp G--S-EEEEEE--TT-----------------------------------------------------------
T ss_pred cCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 3557999999999999965 6778899998764 2 2222334456666443222221 34556666653
No 91
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=95.34 E-value=0.044 Score=55.64 Aligned_cols=60 Identities=15% Similarity=0.225 Sum_probs=51.5
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
...|.|+|+|+.|.+++.+..+++++.. +.+.+.++++.|.-|. ++|++..++|.+|+.+
T Consensus 324 i~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 324 WKTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGHHVQE-DCGEELGGIISGILSK 383 (383)
T ss_pred CCCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCCCcch-hCHHHHHHHHHHHhhC
Confidence 4789999999999999998888777642 3567788999999888 7999999999999864
No 92
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=94.94 E-value=0.69 Score=42.47 Aligned_cols=54 Identities=17% Similarity=0.211 Sum_probs=40.4
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 217 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL 217 (363)
.+.+.+.|.++.|++++|+...+.++ |. .....+|+ .|--.+=++|...|.+|+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~-----~~--~~~i~~gg---dH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYR-----GC--AQIIEEGG---DHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhc-----Cc--eEEEEeCC---CCCCccHHHHHHHHHHhh
Confidence 45699999999999999976655553 22 23345676 566678899999999986
No 93
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.72 E-value=0.25 Score=46.64 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=27.8
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhC
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDL 184 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~ 184 (363)
.+.|++++|+++|..|.+..-++.++++...
T Consensus 168 ~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 168 PGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred CCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 3469999999999999999999999999864
No 94
>PLN02872 triacylglycerol lipase
Probab=94.60 E-value=0.11 Score=53.02 Aligned_cols=65 Identities=14% Similarity=0.131 Sum_probs=52.4
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccc--ccChHhHHHHHHHHHHHHhh
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY--RHYPIDYKAAVTELLGKAGA 222 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~--r~hPeeY~~aV~~FL~ka~~ 222 (363)
+.|.+++||++|.+++.++++.+++.+.. .++.+.+++..|..++ ...|++-.+.|.+|+++..+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 47999999999999999999998876542 3567778898998443 56788888999999986443
No 95
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=94.51 E-value=0.8 Score=42.02 Aligned_cols=130 Identities=22% Similarity=0.280 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcchhhhhhh
Q 017976 23 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARF 102 (363)
Q Consensus 23 ~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~ 102 (363)
.-.+.+..|.++.+..+.+++|.+.|.|..+ +++.+... .. .|.|.++=++|- ....
T Consensus 42 ~~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~----v~h~~~~~-----~~--------~V~GalLVAppd-~~~~----- 98 (181)
T COG3545 42 VLDDWIARLEKEVNAAEGPVVLVAHSLGCAT----VAHWAEHI-----QR--------QVAGALLVAPPD-VSRP----- 98 (181)
T ss_pred CHHHHHHHHHHHHhccCCCeEEEEecccHHH----HHHHHHhh-----hh--------ccceEEEecCCC-cccc-----
Confidence 3455677777777777889999999999963 33333211 11 389999888542 2210
Q ss_pred hccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHH
Q 017976 103 AVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLC 182 (363)
Q Consensus 103 a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r 182 (363)
+..+.. .-.|..+.. .+..-|.+.+.|++|+.++++..+.+++.+-
T Consensus 99 --------~~~~~~-----------------~~tf~~~p~---------~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg 144 (181)
T COG3545 99 --------EIRPKH-----------------LMTFDPIPR---------EPLPFPSVVVASRNDPYVSYEHAEDLANAWG 144 (181)
T ss_pred --------ccchhh-----------------ccccCCCcc---------ccCCCceeEEEecCCCCCCHHHHHHHHHhcc
Confidence 000000 001111100 1345699999999999999999999998874
Q ss_pred hCCCceEEEEcCCCCcccccccC------hHhHHHHHHHHHH
Q 017976 183 DLGADVKLVKWNSSPHVGHYRHY------PIDYKAAVTELLG 218 (363)
Q Consensus 183 ~~G~~V~~~~Fe~S~HV~H~r~h------PeeY~~aV~~FL~ 218 (363)
.. +-+.+|.||+..+ |+-| .-+.+|+.
T Consensus 145 s~--------lv~~g~~GHiN~~sG~g~wpeg~-~~l~~~~s 177 (181)
T COG3545 145 SA--------LVDVGEGGHINAESGFGPWPEGY-ALLAQLLS 177 (181)
T ss_pred Hh--------heecccccccchhhcCCCcHHHH-HHHHHHhh
Confidence 32 2356777787664 5555 33444443
No 96
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=93.95 E-value=2.8 Score=41.84 Aligned_cols=63 Identities=16% Similarity=0.327 Sum_probs=43.8
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccc--ccChHhHHHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY--RHYPIDYKAAVTELLGKA 220 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~--r~hPeeY~~aV~~FL~ka 220 (363)
....|.++|+++.|.+.++....+++.+.-- ..-+.+.. .|++|+ .++|++-.+++.+|+++-
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp--~l~~~vv~---~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRKDVP--RLTERVVI---EGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHHhhc--cccceEEe---cCCcccccccCHHHHHHHHHHHHHhh
Confidence 3568999999999999999844444433211 11133444 466666 458999999999999874
No 97
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=93.85 E-value=0.49 Score=44.15 Aligned_cols=59 Identities=12% Similarity=0.321 Sum_probs=46.7
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
+.+.|-|+|+++.|+++++..+-+.++ +.+.+.+.-.++.|-=|.+.+ +-.++|.+||+
T Consensus 147 P~P~~~lvi~g~~Ddvv~l~~~l~~~~-----~~~~~~i~i~~a~HFF~gKl~--~l~~~i~~~l~ 205 (210)
T COG2945 147 PCPSPGLVIQGDADDVVDLVAVLKWQE-----SIKITVITIPGADHFFHGKLI--ELRDTIADFLE 205 (210)
T ss_pred CCCCCceeEecChhhhhcHHHHHHhhc-----CCCCceEEecCCCceecccHH--HHHHHHHHHhh
Confidence 456899999999999998887766653 356778888999999887764 46778888884
No 98
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=93.84 E-value=0.25 Score=45.58 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=29.0
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCc
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPH 198 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~H 198 (363)
....|.|-++|++|.+++.+..+.+++..... .+... .+..|
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~-h~gGH 200 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIE-HDGGH 200 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEE-ESSSS
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEE-ECCCC
Confidence 34689999999999999999999999998764 33444 45555
No 99
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=93.70 E-value=2.7 Score=40.62 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=30.9
Q ss_pred CCcEEEEEeC-CCCccChHHHHHHHHHHHhCCCceEEEEcCC
Q 017976 155 GAPYLILCSE-DDDLAPYQVIYNFAQRLCDLGADVKLVKWNS 195 (363)
Q Consensus 155 ~~P~LyLYSk-~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~ 195 (363)
..+.|.+-.. .+.--++.....+++.++++|.+|+...|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~ 242 (266)
T TIGR03101 201 NCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPG 242 (266)
T ss_pred CCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCC
Confidence 3466776663 3344455678999999999999999999876
No 100
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.23 E-value=1.1 Score=48.52 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=59.9
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
+..-|++||--|+=|...+.-.++..+-+.|..-+++.|++-.|----.+..+-|...+..|+++
T Consensus 802 pnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 802 PNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 34678899999999999999999999999999999999999999888888899999999999986
No 101
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.39 E-value=3.5 Score=39.69 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=44.1
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
+..+|...+.+++|..|.++++...-+..+ .+.+++.|+| .|- ++++..++-.+.+.+.|.
T Consensus 174 pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~---~~f~l~~fdG-gHF-fl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 174 PLACPIHAFGGEKDHEVSRDELGAWREHTK---GDFTLRVFDG-GHF-FLNQQREEVLARLEQHLA 234 (244)
T ss_pred CcCcceEEeccCcchhccHHHHHHHHHhhc---CCceEEEecC-cce-ehhhhHHHHHHHHHHHhh
Confidence 577999999999999999988877766654 4688888865 342 335556666666665554
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=92.03 E-value=1.4 Score=42.37 Aligned_cols=43 Identities=19% Similarity=0.307 Sum_probs=32.4
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCc
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPH 198 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~H 198 (363)
.....++||++|.=||-+.-+++.+.......++.... ++-+|
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~H 263 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPH 263 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCC
Confidence 44777899999999999999999888764444555554 66666
No 103
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=91.95 E-value=0.47 Score=39.11 Aligned_cols=60 Identities=27% Similarity=0.313 Sum_probs=49.2
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
..|.|+|-++.|+..|++..+..++.+.. -.++.+++..|..+....+.- .++|.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~s~C~-~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGGSPCV-DKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCCChHH-HHHHHHHHHc
Confidence 37999999999999999999998877542 578889999999997555555 4778888764
No 104
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=91.64 E-value=14 Score=37.14 Aligned_cols=62 Identities=21% Similarity=0.283 Sum_probs=47.9
Q ss_pred CcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccCh----HhHHHHHHHHHHH
Q 017976 156 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYP----IDYKAAVTELLGK 219 (363)
Q Consensus 156 ~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hP----eeY~~aV~~FL~k 219 (363)
.|.|++-.+.|.+.. +-...++++++.|++|+...+++..|+.|....- .+=..++.+|+++
T Consensus 269 p~tlv~~ag~D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 269 PPTLVVVAGYDVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred CceEEEEeCchhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 469999999999984 5567788899999999988999999999997664 3334445555543
No 105
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=91.38 E-value=0.7 Score=43.87 Aligned_cols=67 Identities=19% Similarity=0.245 Sum_probs=53.0
Q ss_pred CCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHhhhhhH
Q 017976 152 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQ 226 (363)
Q Consensus 152 ~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~~~~~~ 226 (363)
.+..+|.|-|+|+.|+++|.+.++.+++...+. .+..... +|+-=....|.+.|.+|+......+..
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~Hpg---gH~VP~~~~~~~~i~~fi~~~~~~~~e 226 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-----TVLEHPG---GHIVPNKAKYKEKIADFIQSFLQEESE 226 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCC-----eEEecCC---CccCCCchHHHHHHHHHHHHHHHhhhh
Confidence 367899999999999999999999999998754 3444454 456667778999999999886655443
No 106
>COG4099 Predicted peptidase [General function prediction only]
Probab=91.34 E-value=0.65 Score=46.14 Aligned_cols=42 Identities=24% Similarity=0.314 Sum_probs=35.6
Q ss_pred CCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCC
Q 017976 155 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSS 196 (363)
Q Consensus 155 ~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S 196 (363)
..|.-++||.+|.++|.+...-.++++++.+.+|+..-|...
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g 356 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEG 356 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhc
Confidence 469999999999999999999999999888887776666543
No 107
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=91.07 E-value=0.61 Score=40.27 Aligned_cols=60 Identities=30% Similarity=0.459 Sum_probs=43.2
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 217 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL 217 (363)
...|.|+++|..|.+.|....+...+... + ..+.+.++++.|.-|... |+++.+.+.+|+
T Consensus 220 ~~~P~l~i~g~~d~~~~~~~~~~~~~~~~--~-~~~~~~~~~~gH~~~~~~-p~~~~~~i~~~~ 279 (282)
T COG0596 220 ITVPTLIIHGEDDPVVPAELARRLAAALP--N-DARLVVIPGAGHFPHLEA-PEAFAAALLAFL 279 (282)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHhhCC--C-CceEEEeCCCCCcchhhc-HHHHHHHHHHHH
Confidence 45899999999998888766333333322 2 578888999999988754 557777777744
No 108
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=90.67 E-value=0.27 Score=50.14 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=31.2
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCC--CCccc----cc--ccChHhHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS--SPHVG----HY--RHYPIDYKAAV 213 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~--S~HV~----H~--r~hPeeY~~aV 213 (363)
-+.|.|++-|..|.+.|. |++-++... .+-.++...+++ +++.. ++ +.+.++|.+.|
T Consensus 305 APRPll~~nG~~Dklf~i--V~~AY~~~~-~p~n~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~ 369 (390)
T PF12715_consen 305 APRPLLFENGGKDKLFPI--VRRAYAIMG-APDNFQIHHYPKFADPEIRKSYDWLPEGLDRNEYFRMV 369 (390)
T ss_dssp TTS-EEESS-B-HHHHHH--HHHHHHHTT--GGGEEE---GGG-SGGGS---SS--SSB-HHHHHHHT
T ss_pred CCCcchhhcCCcccccHH--HHHHHHhcC-CCcceEEeecccccChhhhhhhhhcccccChhhhheee
Confidence 346999999999999864 777777653 344577776655 33333 22 34677777654
No 109
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=90.27 E-value=0.58 Score=47.34 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=46.0
Q ss_pred CCccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcc
Q 017976 16 FPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFT 95 (363)
Q Consensus 16 ~p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~ 95 (363)
+|-..+.-+..|+++-...+..+...|++.|||.||....+... +-+ .|||+|+|.+.-|..
T Consensus 287 ~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs-----------~YP-------dVkavvLDAtFDDll 348 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAAS-----------NYP-------DVKAVVLDATFDDLL 348 (517)
T ss_pred CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhh-----------cCC-------CceEEEeecchhhhh
Confidence 45556667778888888888888999999999999974332211 112 499999999665554
Q ss_pred h
Q 017976 96 S 96 (363)
Q Consensus 96 ~ 96 (363)
.
T Consensus 349 p 349 (517)
T KOG1553|consen 349 P 349 (517)
T ss_pred h
Confidence 4
No 110
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=89.70 E-value=5.1 Score=41.19 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=31.4
Q ss_pred cEEEE-EeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCc
Q 017976 157 PYLIL-CSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPH 198 (363)
Q Consensus 157 P~LyL-YSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~H 198 (363)
.++|| +|+.|..+ ++..+++++.++++|.+++...|++ .|
T Consensus 350 lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GH 390 (411)
T PRK10439 350 LRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GH 390 (411)
T ss_pred ceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-Cc
Confidence 46777 46566444 6788999999999999999999987 46
No 111
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=89.03 E-value=2.4 Score=38.24 Aligned_cols=131 Identities=17% Similarity=0.200 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcchhhhhhhh
Q 017976 24 ALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFA 103 (363)
Q Consensus 24 A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a 103 (363)
..+-+..|.+.....+.+++|.+.|.|..+.+ ..+... ... +|+|+++=|+| +.......
T Consensus 39 ~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l----~~l~~~----~~~--------~v~g~lLVAp~-~~~~~~~~--- 98 (171)
T PF06821_consen 39 LDEWVQALDQAIDAIDEPTILVAHSLGCLTAL----RWLAEQ----SQK--------KVAGALLVAPF-DPDDPEPF--- 98 (171)
T ss_dssp HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHH----HHHHHT----CCS--------SEEEEEEES---SCGCHHCC---
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHH----HHHhhc----ccc--------cccEEEEEcCC-Ccccccch---
Confidence 34466666666555567899999999986333 333110 011 49999999966 33210000
Q ss_pred ccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHh
Q 017976 104 VHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCD 183 (363)
Q Consensus 104 ~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~ 183 (363)
++.+ ..|..... . ..+.|.+.|.|++|+.+|++..+++++.+.
T Consensus 99 ----------~~~~-----------------~~f~~~p~---~------~l~~~~~viaS~nDp~vp~~~a~~~A~~l~- 141 (171)
T PF06821_consen 99 ----------PPEL-----------------DGFTPLPR---D------PLPFPSIVIASDNDPYVPFERAQRLAQRLG- 141 (171)
T ss_dssp ----------TCGG-----------------CCCTTSHC---C------HHHCCEEEEEETTBSSS-HHHHHHHHHHHT-
T ss_pred ----------hhhc-----------------cccccCcc---c------ccCCCeEEEEcCCCCccCHHHHHHHHHHcC-
Confidence 0000 00000000 0 112466899999999999999999997763
Q ss_pred CCCceEEEEcCCCCcccccccChHhHHHHHHHHH
Q 017976 184 LGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 217 (363)
Q Consensus 184 ~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL 217 (363)
.+.+..++.+|..-- ..-..|..+.+.|
T Consensus 142 ----a~~~~~~~~GHf~~~--~G~~~~p~~~~~l 169 (171)
T PF06821_consen 142 ----AELIILGGGGHFNAA--SGFGPWPEGLDLL 169 (171)
T ss_dssp -----EEEEETS-TTSSGG--GTHSS-HHHHHHH
T ss_pred ----CCeEECCCCCCcccc--cCCCchHHHHHHh
Confidence 335555555554332 2223444444444
No 112
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=88.53 E-value=4.1 Score=41.21 Aligned_cols=52 Identities=12% Similarity=-0.023 Sum_probs=33.7
Q ss_pred ccCccEEEec-------ccCCccch--HHHHHHHHHHHHHhc-CCCCCEEEEEeccCHHHHH
Q 017976 4 FSGFDYCNIC-------RFFPEKAE--SLALDVLKELVEELK-FGPCPVVFASFSGGPKACM 55 (363)
Q Consensus 4 ~~Gfdvl~v~-------~f~p~k~~--~~A~~vL~~L~~~~~-~~~~~Il~H~FSnGG~~~l 55 (363)
.-|-||++.+ --.++... .-+..++++|.++.. ..+..|+++|.|.||++..
T Consensus 169 ~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 169 ELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred HcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 3577888876 11333322 255667777765443 3467999999999998533
No 113
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=88.26 E-value=1.4 Score=47.21 Aligned_cols=66 Identities=26% Similarity=0.187 Sum_probs=57.4
Q ss_pred CcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccCh-HhHHHHHHHHHHHHh
Q 017976 156 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYP-IDYKAAVTELLGKAG 221 (363)
Q Consensus 156 ~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hP-eeY~~aV~~FL~ka~ 221 (363)
.|.|+--|..|+-|.+-+..+|++++++.|.+|....=.+++|.+---.-+ .+++.-+..||.+.+
T Consensus 581 P~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 581 PPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 489999999999999999999999999999988887777899998876666 778888888888754
No 114
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=87.49 E-value=6.6 Score=38.75 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=25.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLC 182 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r 182 (363)
.+.|.||.||.+|.||--+.++++++..+
T Consensus 211 ~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 211 KPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred CCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 44899999999999999999999987664
No 115
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=86.90 E-value=2 Score=38.92 Aligned_cols=58 Identities=21% Similarity=0.296 Sum_probs=37.0
Q ss_pred CcEEEEEeCCCCccChHHHHHHHHHHHhC-CCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 156 APYLILCSEDDDLAPYQVIYNFAQRLCDL-GADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 156 ~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~-G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
.|.++++...|.+..... ....+.|++. +..++.+.. ++.|...++.| ...|.+++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~-~~~~~~W~~~~~~~~~~~~v-~G~H~~~l~~~----~~~i~~~I~~ 227 (229)
T PF00975_consen 169 VPITLFYALDDPLVSMDR-LEEADRWWDYTSGDVEVHDV-PGDHFSMLKPH----VAEIAEKIAE 227 (229)
T ss_dssp SEEEEEEECSSSSSSHHC-GGHHCHHHGCBSSSEEEEEE-SSETTGHHSTT----HHHHHHHHHH
T ss_pred CcEEEEecCCCccccchh-hhhHHHHHHhcCCCcEEEEE-cCCCcEecchH----HHHHHHHHhc
Confidence 468899999999988762 2223336554 456776655 56899888833 4555555544
No 116
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=86.53 E-value=4.2 Score=39.24 Aligned_cols=64 Identities=20% Similarity=0.249 Sum_probs=45.2
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcC-CCCcccccccChHhHHHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWN-SSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe-~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
..+.|++++-..+|+-+|+..++.|++--++. .+++.... .-.-++|+.-..+..+.-..+++.
T Consensus 214 aVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA--pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 214 AVRTPITFSRALDDPWAPPASRDAFASFYRNA--PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred HhcCceeeeccCCCCcCCHHHHHHHHHhhhcC--cccceecCcccCcccchhhhccchHHHHHHHHH
Confidence 36789999999999999999999999876543 44444322 223588887777766555555543
No 117
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=85.62 E-value=1.6 Score=46.14 Aligned_cols=77 Identities=6% Similarity=-0.036 Sum_probs=47.3
Q ss_pred ccccCccEEEeccc---CC--------ccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhcc
Q 017976 2 ILFSGFDYCNICRF---FP--------EKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKL 70 (363)
Q Consensus 2 ~~~~Gfdvl~v~~f---~p--------~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~ 70 (363)
++.+||.|+.+.+- -+ ....+-+..+|+.+.+.. ....+|.+.|+|+||.+++.... .
T Consensus 49 l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~---~------- 117 (550)
T TIGR00976 49 FVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAV---L------- 117 (550)
T ss_pred HHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhc---c-------
Confidence 45789999999821 11 122235566777765442 23459999999999975442211 0
Q ss_pred CccchhhhccccceEEEcCCCCCcch
Q 017976 71 SLDDRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 71 ~~~~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
..+ .++++|..++..+...
T Consensus 118 ~~~-------~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 118 QPP-------ALRAIAPQEGVWDLYR 136 (550)
T ss_pred CCC-------ceeEEeecCcccchhH
Confidence 111 4889998887665443
No 118
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=84.82 E-value=3 Score=39.59 Aligned_cols=158 Identities=13% Similarity=0.113 Sum_probs=91.9
Q ss_pred cccCccEEEec-ccCCccch-----HHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchh
Q 017976 3 LFSGFDYCNIC-RFFPEKAE-----SLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQ 76 (363)
Q Consensus 3 ~~~Gfdvl~v~-~f~p~k~~-----~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~ 76 (363)
+.+||.|++|. -+.|+-.. .-+..-++++++..++.+ .|+|-|.|.|+...+ |++.+.. +
T Consensus 94 ~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k-~l~~gGHSaGAHLa~----qav~R~r----~----- 159 (270)
T KOG4627|consen 94 VRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTK-VLTFGGHSAGAHLAA----QAVMRQR----S----- 159 (270)
T ss_pred hhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccce-eEEEcccchHHHHHH----HHHHHhc----C-----
Confidence 46899999998 34444311 134445556666555444 499999999996444 4433211 2
Q ss_pred hhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHHHHhhcCCCCCC
Q 017976 77 LVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGA 156 (363)
Q Consensus 77 ~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~~~~~ 156 (363)
++|.|.|+=|+--+...-.+. ..+... .|.-...+....++|. ++ ..+.
T Consensus 160 ---prI~gl~l~~GvY~l~EL~~t------e~g~dl------------------gLt~~~ae~~Scdl~~--~~--~v~~ 208 (270)
T KOG4627|consen 160 ---PRIWGLILLCGVYDLRELSNT------ESGNDL------------------GLTERNAESVSCDLWE--YT--DVTV 208 (270)
T ss_pred ---chHHHHHHHhhHhhHHHHhCC------cccccc------------------CcccchhhhcCccHHH--hc--Ccee
Confidence 258888887754443331111 000000 0100111112223333 11 4567
Q ss_pred cEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccc----ccChHhH
Q 017976 157 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY----RHYPIDY 209 (363)
Q Consensus 157 P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~----r~hPeeY 209 (363)
|.|+++++.|.--=.+...+|+..+++ .....|+++.|-..+ .++.++|
T Consensus 209 ~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy~I~~~~~~~~s~~~ 261 (270)
T KOG4627|consen 209 WILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHYDIIEETAIDDSDVS 261 (270)
T ss_pred eeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchhhHHHHhccccchHH
Confidence 899999999998888898999988775 456678899886554 4455555
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=82.61 E-value=11 Score=36.47 Aligned_cols=64 Identities=9% Similarity=0.056 Sum_probs=47.3
Q ss_pred CCCCcEEEEEeC------CCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhH-HHHHHHHH
Q 017976 153 RFGAPYLILCSE------DDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDY-KAAVTELL 217 (363)
Q Consensus 153 ~~~~P~LyLYSk------~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY-~~aV~~FL 217 (363)
+.....|-|||. .|-+||..+++.+--..+.+....+.+.+.+ ++..|-..|.... .+.|.+||
T Consensus 182 p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G-~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 182 PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTG-KDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEES-GGGSCCGGGCCHHHHHHHHHHH
T ss_pred CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEEC-CCCccccCCCCHHHHHHHHHHh
Confidence 456789999999 9999999999999988888777888888865 3566666654332 34455554
No 120
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=81.23 E-value=4.2 Score=38.41 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=38.8
Q ss_pred ccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhcccc-ceEEEcCCCCCcch
Q 017976 18 EKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCF-SGQIYDSSPVDFTS 96 (363)
Q Consensus 18 ~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~I-kG~IlDS~P~~~~~ 96 (363)
......|.+.++.+.+.. +.+|.+-|+|-||..+.|..+.+- ..+.++| +...+|+ ||-...
T Consensus 65 ~~~q~~A~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~-------------~~~~~rI~~vy~fDg-PGf~~~ 127 (224)
T PF11187_consen 65 TPQQKSALAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCD-------------DEIQDRISKVYSFDG-PGFSEE 127 (224)
T ss_pred CHHHHHHHHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHcc-------------HHHhhheeEEEEeeC-CCCChh
Confidence 334457777777776654 346999999999986666654421 1122356 4555999 764443
No 121
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=78.52 E-value=8.4 Score=39.70 Aligned_cols=39 Identities=31% Similarity=0.290 Sum_probs=34.9
Q ss_pred CcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcC
Q 017976 156 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWN 194 (363)
Q Consensus 156 ~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe 194 (363)
.-.+-.||..|+++|.++=+++++..+++|.++++....
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIk 332 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIK 332 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence 345558999999999999999999999999999999883
No 122
>PRK04940 hypothetical protein; Provisional
Probab=78.20 E-value=56 Score=30.05 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=42.3
Q ss_pred CcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 156 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 156 ~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
-..+.|-.+.|++.+|+...+.++..- . ...++|+.|- =.+-++|...|.+|+++
T Consensus 125 ~r~~vllq~gDEvLDyr~a~~~y~~~y----~--~~v~~GGdH~---f~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRTAEELHPYY----E--IVWDEEQTHK---FKNISPHLQRIKAFKTL 179 (180)
T ss_pred ccEEEEEeCCCcccCHHHHHHHhccCc----e--EEEECCCCCC---CCCHHHHHHHHHHHHhc
Confidence 355889999999999999888874431 2 4456777764 56778899999999864
No 123
>PRK10349 carboxylesterase BioH; Provisional
Probab=77.94 E-value=4.9 Score=37.01 Aligned_cols=49 Identities=20% Similarity=0.162 Sum_probs=27.2
Q ss_pred cccCccEEEeccc---CCcc--chHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHH
Q 017976 3 LFSGFDYCNICRF---FPEK--AESLALDVLKELVEELKFGPCPVVFASFSGGPKACM 55 (363)
Q Consensus 3 ~~~Gfdvl~v~~f---~p~k--~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l 55 (363)
|.+.|+|+++.+- .... ...+ ..+.+.+.+ . ...++.+.|+|+||.+++
T Consensus 36 L~~~~~vi~~Dl~G~G~S~~~~~~~~-~~~~~~l~~-~--~~~~~~lvGhS~Gg~ia~ 89 (256)
T PRK10349 36 LSSHFTLHLVDLPGFGRSRGFGALSL-ADMAEAVLQ-Q--APDKAIWLGWSLGGLVAS 89 (256)
T ss_pred HhcCCEEEEecCCCCCCCCCCCCCCH-HHHHHHHHh-c--CCCCeEEEEECHHHHHHH
Confidence 5677999999732 1110 0111 123333332 2 235788999999998555
No 124
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=75.95 E-value=2.5 Score=40.16 Aligned_cols=77 Identities=10% Similarity=0.000 Sum_probs=51.1
Q ss_pred ccccCccEEEec---------ccC--CccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhcc
Q 017976 2 ILFSGFDYCNIC---------RFF--PEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKL 70 (363)
Q Consensus 2 ~~~~Gfdvl~v~---------~f~--p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~ 70 (363)
|.++||-|+++. .+. .....+-+.++|+.+.+. +-.+..|...|.|-+|.+.+.... .
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~----~------ 121 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAA----R------ 121 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHT----T------
T ss_pred HHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHh----c------
Confidence 678999999997 222 344556888899888765 434558999999999975443321 0
Q ss_pred CccchhhhccccceEEEcCCCCCcch
Q 017976 71 SLDDRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 71 ~~~~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
.++ .+|++|--+++.+...
T Consensus 122 ~~p-------~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 122 RPP-------HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp T-T-------TEEEEEEESE-SBTCC
T ss_pred CCC-------CceEEEecccCCcccc
Confidence 112 3889998887776665
No 125
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=75.35 E-value=3 Score=39.83 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=43.8
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHH
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTEL 216 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~F 216 (363)
+..+|.|=.||-+|.+||.++..++++.... -+++..|++.|+ |-.|..+-...+.+|
T Consensus 197 d~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHn--yt~~q~~l~~lgl~f 254 (269)
T KOG4667|consen 197 DKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHN--YTGHQSQLVSLGLEF 254 (269)
T ss_pred CccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcC--ccchhhhHhhhccee
Confidence 5789999999999999999999999988763 456677999997 444444444443333
No 126
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.30 E-value=3.8 Score=39.45 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=30.0
Q ss_pred cCccEEEecc--c----CCccch------HHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHH
Q 017976 5 SGFDYCNICR--F----FPEKAE------SLALDVLKELVEELKFGPCPVVFASFSGGPKACM 55 (363)
Q Consensus 5 ~Gfdvl~v~~--f----~p~k~~------~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l 55 (363)
.+|+|+++.. + ++.... +....+|+.|.+.......+|.+.|+|+||.++.
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg 127 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAG 127 (275)
T ss_pred CCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHH
Confidence 4799999972 1 111111 1123455555544333456899999999997544
No 127
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=74.18 E-value=82 Score=32.28 Aligned_cols=164 Identities=18% Similarity=0.187 Sum_probs=84.3
Q ss_pred cCCccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCc
Q 017976 15 FFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDF 94 (363)
Q Consensus 15 f~p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~ 94 (363)
-+|.+-.+.. ...+.|++... ...|+++|=|.||-..+ .++|-+... . . . +.-+..|+-|+=+..
T Consensus 173 ~yPtQL~qlv-~~Y~~Lv~~~G--~~nI~LmGDSAGGnL~L-s~LqyL~~~-~---~-----~--~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 173 KYPTQLRQLV-ATYDYLVESEG--NKNIILMGDSAGGNLAL-SFLQYLKKP-N---K-----L--PYPKSAILISPWVNL 237 (374)
T ss_pred cCchHHHHHH-HHHHHHHhccC--CCeEEEEecCccHHHHH-HHHHHHhhc-C---C-----C--CCCceeEEECCCcCC
Confidence 3666655533 36667775442 45899999999997555 344444321 1 0 1 123789999955555
Q ss_pred chhh--hhhhhccccccccCCChhHHHHHHHHHHhhhc---hhhhccc---cc-hhHHHHHHhhcCCCCCCcEEEEEeCC
Q 017976 95 TSDL--GARFAVHPSVLNMSHPPRLVSRIANGIASGLD---AFFLNRF---ES-HRAEYWQTLYSSVRFGAPYLILCSED 165 (363)
Q Consensus 95 ~~~~--g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~---~l~~~~f---~~-~~~~y~~~L~~~~~~~~P~LyLYSk~ 165 (363)
.... .........-..+.....+.. +....+...+ .+....+ +. -..+.|..+.. ..-.+++||+.
T Consensus 238 ~~~~~~~~~~~~~n~~~D~l~~~~~~~-~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~----~~~vfVi~Ge~ 312 (374)
T PF10340_consen 238 VPQDSQEGSSYHDNEKRDMLSYKGLSM-FGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILK----KYSVFVIYGED 312 (374)
T ss_pred cCCCCCCCccccccccccccchhhHHH-HHHhhccccccccccccCCccCcccCCChhHHHHhcc----CCcEEEEECCc
Confidence 4200 000000000011111111111 1111111100 0101111 11 12456877732 24688899998
Q ss_pred CCccChHHHHHHHHHHHhCCC-----ceEEEEcCCCCccc
Q 017976 166 DDLAPYQVIYNFAQRLCDLGA-----DVKLVKWNSSPHVG 200 (363)
Q Consensus 166 D~lVP~~~Ve~~a~~~r~~G~-----~V~~~~Fe~S~HV~ 200 (363)
+-+-+ +|+++++.+.+.+. .++...=++..|++
T Consensus 313 Evfrd--dI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 313 EVFRD--DILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred cccHH--HHHHHHHHHhhcCccccCCcceEEEecCCcccc
Confidence 88876 99999999986542 35555567899998
No 128
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.02 E-value=7.5 Score=33.45 Aligned_cols=43 Identities=9% Similarity=-0.027 Sum_probs=26.1
Q ss_pred CCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCC
Q 017976 38 GPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 92 (363)
Q Consensus 38 ~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~ 92 (363)
....|++-|+|+||+++......+.... -...+..+.||+++.
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~------------~~~~~~~~~fg~p~~ 68 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG------------LGRLVRVYTFGPPRV 68 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc------------CCCceEEEEeCCCcc
Confidence 3669999999999985554333321100 011367888888443
No 129
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=72.88 E-value=5.6 Score=39.42 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=43.7
Q ss_pred HHHHHHhhcCC-----CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHH
Q 017976 142 AEYWQTLYSSV-----RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTEL 216 (363)
Q Consensus 142 ~~y~~~L~~~~-----~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~F 216 (363)
..||..-+..- ..+.|.|.|--..|.+=.- --+- +.-.+-+++.++.+.|+-| +.-|.+-...+-.|
T Consensus 252 e~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkd----LtiG---QMQGk~Q~~vL~~~GH~v~-ED~P~kva~~~~~f 323 (343)
T KOG2564|consen 252 EQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKD----LTIG---QMQGKFQLQVLPLCGHFVH-EDSPHKVAECLCVF 323 (343)
T ss_pred chhHHHHHhhhhhHhhCCCccceeEEecccccCcc----eeee---eeccceeeeeecccCceec-cCCcchHHHHHHHH
Confidence 34776644321 3457888887777765321 0010 1123678888888888776 45688888888888
Q ss_pred HHH
Q 017976 217 LGK 219 (363)
Q Consensus 217 L~k 219 (363)
|.+
T Consensus 324 ~~R 326 (343)
T KOG2564|consen 324 WIR 326 (343)
T ss_pred Hhh
Confidence 875
No 130
>PLN00021 chlorophyllase
Probab=71.06 E-value=11 Score=37.35 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=45.6
Q ss_pred CCCcEEEEEeCCCC-----ccC----hHHH-HHHHHHHHhCCCceEEEEcCCCCcccccccChH--------------hH
Q 017976 154 FGAPYLILCSEDDD-----LAP----YQVI-YNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI--------------DY 209 (363)
Q Consensus 154 ~~~P~LyLYSk~D~-----lVP----~~~V-e~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPe--------------eY 209 (363)
...|.|+|.+..|. ++| ...- ++|+++++. ......-++..|.+-+-.... +=
T Consensus 188 ~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~ 264 (313)
T PLN00021 188 LDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA---PAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKP 264 (313)
T ss_pred CCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC---CeeeeeecCCCcceeecCCCccccccccccccCCCCc
Confidence 45799999999663 333 4443 667766642 566666788999888655510 02
Q ss_pred HHHHHHHHHHHhhhhhHH
Q 017976 210 KAAVTELLGKAGAVYSQR 227 (363)
Q Consensus 210 ~~aV~~FL~ka~~~~~~~ 227 (363)
.+.+++|+......+.+.
T Consensus 265 ~~~~r~~~~g~~~aFl~~ 282 (313)
T PLN00021 265 RKPMRRFVGGAVVAFLKA 282 (313)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 567777777777776644
No 131
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.14 E-value=13 Score=37.82 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=52.2
Q ss_pred ccCccEEEecccCCccch-----------HHHHHHHHHHHHHhcCC--CCCEEEEEeccCHHHHHHHHHHHHHhhhhhcc
Q 017976 4 FSGFDYCNICRFFPEKAE-----------SLALDVLKELVEELKFG--PCPVVFASFSGGPKACMYKVLQITEGICEAKL 70 (363)
Q Consensus 4 ~~Gfdvl~v~~f~p~k~~-----------~~A~~vL~~L~~~~~~~--~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~ 70 (363)
+.|++.+.|-+-||..+. ..+.+-|+.++..+... -..|.+.+.|||....+..+-|+.-+
T Consensus 142 d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~------ 215 (377)
T COG4782 142 DSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIR------ 215 (377)
T ss_pred hcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhcc------
Confidence 567777777666887654 24455555555554432 34899999999999777777666422
Q ss_pred CccchhhhccccceEEEcCCCCCc
Q 017976 71 SLDDRQLVRDCFSGQIYDSSPVDF 94 (363)
Q Consensus 71 ~~~~~~~l~~~IkG~IlDS~P~~~ 94 (363)
.++.+...|+-+|+=++=.|.
T Consensus 216 ---~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 216 ---ADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred ---CCcchhhhhhheEeeCCCCCh
Confidence 223344557888887744433
No 132
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=68.54 E-value=88 Score=34.39 Aligned_cols=159 Identities=21% Similarity=0.178 Sum_probs=89.1
Q ss_pred ccccCccEEEec------c--cCCccchH--------HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhh
Q 017976 2 ILFSGFDYCNIC------R--FFPEKAES--------LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGI 65 (363)
Q Consensus 2 ~~~~Gfdvl~v~------~--f~p~k~~~--------~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~ 65 (363)
.|||||=....+ + -|-+.++. -=...-+.|+++.-..+..|++.|=|.||... +.+++.
T Consensus 473 LlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLm----Gav~N~- 547 (682)
T COG1770 473 LLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLM----GAVANM- 547 (682)
T ss_pred eecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHH----HHHHhh-
Confidence 478898777765 1 15554432 11124456676665567799999999999632 233321
Q ss_pred hhhccCccchhhhccccceEEEcCCCCCcchhhhhhhhccccccccCCChhHHHHHHHHHHhhhchhhhccccchhHHHH
Q 017976 66 CEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYW 145 (363)
Q Consensus 66 ~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~a~~p~~~k~~~pp~l~~~v~~~i~s~L~~l~~~~f~~~~~~y~ 145 (363)
.++ ..+|+|...+.+|...+.- .|+++-.+ +-+.. ++++ +..+++
T Consensus 548 -----~P~-------lf~~iiA~VPFVDvltTMl-----D~slPLT~--~E~~E-------------WGNP---~d~e~y 592 (682)
T COG1770 548 -----APD-------LFAGIIAQVPFVDVLTTML-----DPSLPLTV--TEWDE-------------WGNP---LDPEYY 592 (682)
T ss_pred -----Chh-------hhhheeecCCccchhhhhc-----CCCCCCCc--cchhh-------------hCCc---CCHHHH
Confidence 112 2689999998887766221 12221110 00001 1222 122333
Q ss_pred HHhh--cC---C--CCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEc---CCCCccc
Q 017976 146 QTLY--SS---V--RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW---NSSPHVG 200 (363)
Q Consensus 146 ~~L~--~~---~--~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~F---e~S~HV~ 200 (363)
+-+. ++ . ..-.+.|.+.|-.|+-|.|=+.-+.++++|+.+-+-....+ -+++|-|
T Consensus 593 ~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG 657 (682)
T COG1770 593 DYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGG 657 (682)
T ss_pred HHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCC
Confidence 3321 11 0 12247888999999999999999999999887443322333 3466644
No 133
>PLN02872 triacylglycerol lipase
Probab=67.25 E-value=8.3 Score=39.41 Aligned_cols=17 Identities=12% Similarity=0.221 Sum_probs=13.9
Q ss_pred CCCEEEEEeccCHHHHH
Q 017976 39 PCPVVFASFSGGPKACM 55 (363)
Q Consensus 39 ~~~Il~H~FSnGG~~~l 55 (363)
..++.+.|+|+||.+.+
T Consensus 159 ~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 159 NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred CCceEEEEECHHHHHHH
Confidence 46899999999997443
No 134
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=67.13 E-value=5.5 Score=36.69 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHH
Q 017976 23 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYK 57 (363)
Q Consensus 23 ~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~ 57 (363)
+..+|+..+-+..+..+.+..+.|+||||...++.
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~ 132 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYL 132 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHH
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHH
Confidence 33444444444444333349999999999754433
No 135
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=66.25 E-value=13 Score=34.50 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcC---CCCCEEEEEeccCHHHHHHHHHHH
Q 017976 23 LALDVLKELVEELKF---GPCPVVFASFSGGPKACMYKVLQI 61 (363)
Q Consensus 23 ~A~~vL~~L~~~~~~---~~~~Il~H~FSnGG~~~l~~l~ql 61 (363)
.|..+++++.+..+. ...+|.|.|.|+||-.+=+.+..+
T Consensus 58 ~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 58 CGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLL 99 (217)
T ss_pred HHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHHHh
Confidence 667777777665432 235899999999997555444444
No 136
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=63.09 E-value=14 Score=34.30 Aligned_cols=72 Identities=17% Similarity=0.229 Sum_probs=44.2
Q ss_pred cccCccEEEec---ccCCccchH-HHHH---HHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccch
Q 017976 3 LFSGFDYCNIC---RFFPEKAES-LALD---VLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDR 75 (363)
Q Consensus 3 ~~~Gfdvl~v~---~f~p~k~~~-~A~~---vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~ 75 (363)
.++|+.|+-++ -||.++.=+ .|.+ +|+...+.- ....+++.|+|-|+-+.-..+.++ +
T Consensus 26 ~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w--~~~~vvLiGYSFGADvlP~~~nrL-----------p-- 90 (192)
T PF06057_consen 26 AKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARW--GRKRVVLIGYSFGADVLPFIYNRL-----------P-- 90 (192)
T ss_pred HHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHh--CCceEEEEeecCCchhHHHHHhhC-----------C--
Confidence 36899999998 568776433 4433 333333222 366999999999996322222211 2
Q ss_pred hhhccccceEEEcC
Q 017976 76 QLVRDCFSGQIYDS 89 (363)
Q Consensus 76 ~~l~~~IkG~IlDS 89 (363)
..++.+|+++++=+
T Consensus 91 ~~~r~~v~~v~Ll~ 104 (192)
T PF06057_consen 91 AALRARVAQVVLLS 104 (192)
T ss_pred HHHHhheeEEEEec
Confidence 24566788988877
No 137
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.20 E-value=25 Score=38.09 Aligned_cols=74 Identities=22% Similarity=0.215 Sum_probs=45.9
Q ss_pred cCCccchH--HH---HHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcC
Q 017976 15 FFPEKAES--LA---LDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDS 89 (363)
Q Consensus 15 f~p~k~~~--~A---~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS 89 (363)
.||.++-+ +| ..+++.|...--...+||+..|.||||- +.=.-+++..|.+ .|+-+.+-.+.+|+||=|
T Consensus 496 ~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGL---l~K~lLlda~~S~---kP~ms~l~kNtrGiiFls 569 (697)
T KOG2029|consen 496 RCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGL---LAKKLLLDAYCSS---KPDMSNLNKNTRGIIFLS 569 (697)
T ss_pred cCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchH---HHHHHHHHHhhcC---CchhhhhhccCCceEEEe
Confidence 47776443 44 4455444433333488999999999995 2222234444432 356667777789999999
Q ss_pred CCCCc
Q 017976 90 SPVDF 94 (363)
Q Consensus 90 ~P~~~ 94 (363)
.|-..
T Consensus 570 ~PHrG 574 (697)
T KOG2029|consen 570 VPHRG 574 (697)
T ss_pred cCCCC
Confidence 88433
No 138
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=56.61 E-value=42 Score=31.57 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=35.5
Q ss_pred cCccEEEecccCCccchH-----------HHHHHHHHHHHHhcCC--CCCEEEEEeccCHHHHHHHHHHHH
Q 017976 5 SGFDYCNICRFFPEKAES-----------LALDVLKELVEELKFG--PCPVVFASFSGGPKACMYKVLQIT 62 (363)
Q Consensus 5 ~Gfdvl~v~~f~p~k~~~-----------~A~~vL~~L~~~~~~~--~~~Il~H~FSnGG~~~l~~l~qll 62 (363)
-||+...+..-||..+.. .+..-|.++++.+... ...|-+.+.|||+-..+..+.++.
T Consensus 45 ~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~ 115 (233)
T PF05990_consen 45 LGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLA 115 (233)
T ss_pred hCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHH
Confidence 456666666568875431 2333344444444323 559999999999987666665553
No 139
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=55.26 E-value=22 Score=29.53 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=16.2
Q ss_pred CCCEEEEEeccCHHHHHHHHHH
Q 017976 39 PCPVVFASFSGGPKACMYKVLQ 60 (363)
Q Consensus 39 ~~~Il~H~FSnGG~~~l~~l~q 60 (363)
+..|++-|+|.||+......+.
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHh
Confidence 4689999999999854433333
No 140
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=55.15 E-value=34 Score=29.15 Aligned_cols=67 Identities=16% Similarity=0.096 Sum_probs=36.9
Q ss_pred ccEEEeccc---CCc----cchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhc
Q 017976 7 FDYCNICRF---FPE----KAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVR 79 (363)
Q Consensus 7 fdvl~v~~f---~p~----k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~ 79 (363)
|+|+.+..- ... ..... ..-+..+.+... ..++++-|+|+||...+....+. ++
T Consensus 51 ~~~~~~d~~g~g~s~~~~~~~~~~-~~~~~~~~~~~~--~~~~~l~G~S~Gg~~~~~~~~~~----------p~------ 111 (282)
T COG0596 51 YRVIAPDLRGHGRSDPAGYSLSAY-ADDLAALLDALG--LEKVVLVGHSMGGAVALALALRH----------PD------ 111 (282)
T ss_pred eEEEEecccCCCCCCcccccHHHH-HHHHHHHHHHhC--CCceEEEEecccHHHHHHHHHhc----------ch------
Confidence 777777622 221 11123 233445555443 23499999999986433222111 11
Q ss_pred cccceEEEcCCCCC
Q 017976 80 DCFSGQIYDSSPVD 93 (363)
Q Consensus 80 ~~IkG~IlDS~P~~ 93 (363)
.++++|+++++..
T Consensus 112 -~~~~~v~~~~~~~ 124 (282)
T COG0596 112 -RVRGLVLIGPAPP 124 (282)
T ss_pred -hhheeeEecCCCC
Confidence 4899999996654
No 141
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=54.78 E-value=26 Score=36.56 Aligned_cols=51 Identities=14% Similarity=0.172 Sum_probs=30.8
Q ss_pred CccEEEeccc------CCccc--hH-H---HHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHH
Q 017976 6 GFDYCNICRF------FPEKA--ES-L---ALDVLKELVEELKFGPCPVVFASFSGGPKACMY 56 (363)
Q Consensus 6 Gfdvl~v~~f------~p~k~--~~-~---A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~ 56 (363)
.|+|++|..- .+... .+ . ...+|+.|.+........+.+.|+|+||.+.++
T Consensus 73 d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ 135 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGI 135 (442)
T ss_pred CCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHH
Confidence 5999999821 22211 11 2 234555555444434568999999999975553
No 142
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=54.16 E-value=7.8 Score=35.98 Aligned_cols=158 Identities=15% Similarity=0.088 Sum_probs=92.2
Q ss_pred cEEEEEeCCC-CccChHHHHHHHHHHHhCC--Cc-eEEEEcCCCCcccccccChHhHHHHHHHHH-------HHHhhhhh
Q 017976 157 PYLILCSEDD-DLAPYQVIYNFAQRLCDLG--AD-VKLVKWNSSPHVGHYRHYPIDYKAAVTELL-------GKAGAVYS 225 (363)
Q Consensus 157 P~LyLYSk~D-~lVP~~~Ve~~a~~~r~~G--~~-V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL-------~ka~~~~~ 225 (363)
+.+++|+=.. -..-+..+.+.++...+-+ .+ +....|+.+|+..++ ....+++.+...-. ...+....
T Consensus 67 ~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (240)
T PF05705_consen 67 PPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY-SSSARAFSAALPKSSPRWFVPLWPLLQFL 145 (240)
T ss_pred CCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc-ccHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence 4667666554 4444445554444443211 23 788899999999999 66666665553322 11111111
Q ss_pred HHHHHHhhhhcCCCCCCCCcCCccccccccccCCCCcccccccCC--CCcccccCCcc-cccCCCCCCchhhhhccc--c
Q 017976 226 QRIQRLEREKMGLEGTHDDMADPMYNLSKAAVSPTRSFRGTSLVP--SDHFVLPSSLE-YYDGRDVGSLQDEHKERL--I 300 (363)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~ 300 (363)
... ..... -+|-..+.....++.++.....| +-+.|+-|..+ ....++++...+|.|+.= +
T Consensus 146 ~~~-~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V 211 (240)
T PF05705_consen 146 LRL-SIISY-------------FIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDV 211 (240)
T ss_pred HHH-HHHHH-------------HHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeE
Confidence 111 11111 12223333333444455555555 34788888887 556788888989888733 2
Q ss_pred CCCCCCCCCcccchhhhhhcccccCCCcCc
Q 017976 301 HLPNPPSINTHGVLGQILFDVCVPKNVEGW 330 (363)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (363)
..-.. .-+||-...+.-.|.|+.+..|.|
T Consensus 212 ~~~~f-~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 212 RAEKF-EDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred EEecC-CCCchhhhcccCHHHHHHHHHhhC
Confidence 33233 347999999999999999988887
No 143
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=53.77 E-value=36 Score=31.86 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHh---cCCCCCEEEEEeccCHHH
Q 017976 23 LALDVLKELVEEL---KFGPCPVVFASFSGGPKA 53 (363)
Q Consensus 23 ~A~~vL~~L~~~~---~~~~~~Il~H~FSnGG~~ 53 (363)
...+.++.+.+.. ...+.+|++.|.||||..
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlv 98 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLV 98 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHH
Confidence 3344555555443 345779999999999963
No 144
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=51.45 E-value=48 Score=32.11 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCC
Q 017976 22 SLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 92 (363)
Q Consensus 22 ~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~ 92 (363)
.+|...++.+.+.. ...|+.+-|+|.||...+ .+++.|.+. + .. + ..-.++|+.|.
T Consensus 49 ~~a~~yv~~Ir~~Q--P~GPy~L~G~S~GG~vA~-evA~qL~~~--G---~~----V---a~L~llD~~~~ 104 (257)
T COG3319 49 DMAAAYVAAIRRVQ--PEGPYVLLGWSLGGAVAF-EVAAQLEAQ--G---EE----V---AFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHHhC--CCCCEEEEeeccccHHHH-HHHHHHHhC--C---Ce----E---EEEEEeccCCC
Confidence 36666676665544 356999999999998554 444444431 1 11 1 24568999777
No 145
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=49.04 E-value=47 Score=30.52 Aligned_cols=42 Identities=10% Similarity=0.016 Sum_probs=25.6
Q ss_pred CCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCC
Q 017976 39 PCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 92 (363)
Q Consensus 39 ~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~ 92 (363)
..+|++-|.|+||++.....+.+.... -...+.++.|-+++.
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~------------~~~~i~~~tFg~P~v 168 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRG------------PGSDVTVYTFGQPRV 168 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhC------------CCCceEEEEeCCCCC
Confidence 558999999999985543333332110 012377888887443
No 146
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=48.98 E-value=60 Score=30.65 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=44.3
Q ss_pred CccEEEec---ccCCcc---------chHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCcc
Q 017976 6 GFDYCNIC---RFFPEK---------AESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLD 73 (363)
Q Consensus 6 Gfdvl~v~---~f~p~k---------~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~ 73 (363)
|+++..|. -|||-. ....+.+.|...+........++++.|+|.|+......+.++.... ..+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~-----~~~ 76 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADG-----DPP 76 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcC-----CCC
Confidence 45555555 566731 1124455555555443336779999999999986554455544311 001
Q ss_pred chhhhccccceEEEcCCCCCcch
Q 017976 74 DRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 74 ~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
. +.+ ..|+.+-|.....
T Consensus 77 ---~--~~l-~fVl~gnP~rp~G 93 (225)
T PF08237_consen 77 ---P--DDL-SFVLIGNPRRPNG 93 (225)
T ss_pred ---c--Cce-EEEEecCCCCCCC
Confidence 0 223 4677776765544
No 147
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=47.46 E-value=26 Score=37.69 Aligned_cols=77 Identities=14% Similarity=0.040 Sum_probs=54.6
Q ss_pred ccccCccEEEec---------ccCCc--cchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhcc
Q 017976 2 ILFSGFDYCNIC---------RFFPE--KAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKL 70 (363)
Q Consensus 2 ~~~~Gfdvl~v~---------~f~p~--k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~ 70 (363)
|..+||-|+.+. .|-++ .+.+-+.++|+.|.+ .+-.+..|...|.|-+|.++++.++.
T Consensus 76 ~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~-QpWsNG~Vgm~G~SY~g~tq~~~Aa~---------- 144 (563)
T COG2936 76 FAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAK-QPWSNGNVGMLGLSYLGFTQLAAAAL---------- 144 (563)
T ss_pred eecCceEEEEecccccccCCcccceeccccccchhHHHHHHHh-CCccCCeeeeecccHHHHHHHHHHhc----------
Confidence 567999999996 23222 456689999999987 33356699999999999866544321
Q ss_pred CccchhhhccccceEEEcCCCCCcch
Q 017976 71 SLDDRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 71 ~~~~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
+++ .+|++|-.++..+...
T Consensus 145 ~pP-------aLkai~p~~~~~D~y~ 163 (563)
T COG2936 145 QPP-------ALKAIAPTEGLVDRYR 163 (563)
T ss_pred CCc-------hheeeccccccccccc
Confidence 222 3788888887777544
No 148
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=47.42 E-value=87 Score=31.13 Aligned_cols=54 Identities=17% Similarity=0.262 Sum_probs=37.7
Q ss_pred HHHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccc
Q 017976 144 YWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVG 200 (363)
Q Consensus 144 y~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~ 200 (363)
|++.+|-+...+.|.|+.-+--|++||+.-+-..++... .+.+.+.|+.-.|-+
T Consensus 248 yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~---~~K~i~iy~~~aHe~ 301 (321)
T COG3458 248 YFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT---TSKTIEIYPYFAHEG 301 (321)
T ss_pred hhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhccc---CCceEEEeecccccc
Confidence 444444444567899999999999999988777776653 245566666655754
No 149
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=45.93 E-value=43 Score=28.12 Aligned_cols=39 Identities=18% Similarity=0.297 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHH
Q 017976 23 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQI 61 (363)
Q Consensus 23 ~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~ql 61 (363)
+...-+..+.+.....+.||++|+-|+.=+..++.+.+.
T Consensus 70 ~~~~~v~~f~~~l~~~~~Pvl~hC~sG~Ra~~l~~l~~~ 108 (110)
T PF04273_consen 70 ITEEDVEAFADALESLPKPVLAHCRSGTRASALWALAQA 108 (110)
T ss_dssp --HHHHHHHHHHHHTTTTSEEEE-SCSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEEECCCChhHHHHHHHHhh
Confidence 333444444444444577999999999988777776664
No 150
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=43.77 E-value=67 Score=35.20 Aligned_cols=48 Identities=13% Similarity=0.225 Sum_probs=41.7
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccccc
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRH 204 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~ 204 (363)
++.|.||+-+.+|.+++.+.+|++.+++++ .++++..++..|---..+
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAIPK 350 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccCCc
Confidence 678999999999999999999999998875 578888899999766644
No 151
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=43.32 E-value=73 Score=29.11 Aligned_cols=71 Identities=20% Similarity=0.233 Sum_probs=49.3
Q ss_pred cEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCC--ccccc-------ccChHhHHHHHHHHHHHHhhhhhHH
Q 017976 157 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSP--HVGHY-------RHYPIDYKAAVTELLGKAGAVYSQR 227 (363)
Q Consensus 157 P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~--HV~H~-------r~hPeeY~~aV~~FL~ka~~~~~~~ 227 (363)
..|++||..|--.- +..+.++..+++.|.+|+.+--..-. --+|| .-+-..|-+++.+|+++....-..|
T Consensus 2 k~LIlYstr~GqT~-kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~~e~L~~k 80 (175)
T COG4635 2 KTLILYSTRDGQTR-KIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKHAEALSTK 80 (175)
T ss_pred ceEEEEecCCCcHH-HHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHHHHHHhcC
Confidence 57999999998754 56788888899999988776432211 12222 2244557789999999977766665
Q ss_pred H
Q 017976 228 I 228 (363)
Q Consensus 228 ~ 228 (363)
+
T Consensus 81 P 81 (175)
T COG4635 81 P 81 (175)
T ss_pred C
Confidence 4
No 152
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.11 E-value=45 Score=33.03 Aligned_cols=59 Identities=15% Similarity=0.301 Sum_probs=48.8
Q ss_pred EEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 158 YLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 158 ~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
..++-.++|..||-+.+..+.+.|- |..|+.. ..+||..|-.+-++++.+|.+-|.+.-
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP--g~eVr~~---egGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP--GCEVRYL---EGGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC--CCEEEEe---ecCceeeeehhchHHHHHHHHHHHhhh
Confidence 4457789999999999888887774 6666555 389999999999999999999998643
No 153
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=39.52 E-value=82 Score=32.20 Aligned_cols=61 Identities=26% Similarity=0.267 Sum_probs=47.2
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCccccc--ccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY--RHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~--r~hPeeY~~aV~~FL~k 219 (363)
.++|.|.+-...|-+.|+++.++.++.++..|. .+.+ +|+| ||- -...+.|-..|.+||+.
T Consensus 305 i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i-~S~~-GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 305 IKAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREI-DSPY-GHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEe-cCCC-CchhhhcchhhhhHHHHHHhhc
Confidence 568999999999999999999999999887664 3333 4554 553 34556688999999874
No 154
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=38.85 E-value=27 Score=34.83 Aligned_cols=51 Identities=12% Similarity=0.186 Sum_probs=29.6
Q ss_pred cCccEEEec------ccCCccch------HHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHH
Q 017976 5 SGFDYCNIC------RFFPEKAE------SLALDVLKELVEELKFGPCPVVFASFSGGPKACM 55 (363)
Q Consensus 5 ~Gfdvl~v~------~f~p~k~~------~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l 55 (363)
+.+||++|. ........ +...++|..|.+........|-+.|||.||-++.
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG 165 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAG 165 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHH
T ss_pred CCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhh
Confidence 488999997 11111111 1223456666655556677999999999997555
No 155
>PRK07581 hypothetical protein; Validated
Probab=37.67 E-value=75 Score=30.76 Aligned_cols=23 Identities=17% Similarity=0.226 Sum_probs=15.2
Q ss_pred HHHHhcCCCCC-EEEEEeccCHHHHH
Q 017976 31 LVEELKFGPCP-VVFASFSGGPKACM 55 (363)
Q Consensus 31 L~~~~~~~~~~-Il~H~FSnGG~~~l 55 (363)
|.+.+. -.+ .+|.|+||||...+
T Consensus 116 l~~~lg--i~~~~~lvG~S~GG~va~ 139 (339)
T PRK07581 116 LTEKFG--IERLALVVGWSMGAQQTY 139 (339)
T ss_pred HHHHhC--CCceEEEEEeCHHHHHHH
Confidence 444443 345 57899999997444
No 156
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=37.03 E-value=1e+02 Score=31.43 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=42.9
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 219 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~k 219 (363)
..+|.++|||..|=|=...- .+.-..+. ...|+....++++|- -|-++|+.+-+.|.+++++
T Consensus 302 ~~~pv~fiyG~~dWmD~~~g-~~~~~~~~--~~~~~~~~v~~aGHh-vylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 302 KDVPVTFIYGDRDWMDKNAG-LEVTKSLM--KEYVEIIIVPGAGHH-VYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred cCCCEEEEecCcccccchhH-HHHHHHhh--cccceEEEecCCCce-eecCCHHHHHHHHHHHHhc
Confidence 35899999999886644333 22222221 224777777888883 3678999999999999876
No 157
>COG3150 Predicted esterase [General function prediction only]
Probab=36.88 E-value=3.5e+02 Score=25.13 Aligned_cols=52 Identities=15% Similarity=0.276 Sum_probs=39.8
Q ss_pred cEEEEEeCC-CCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 157 PYLILCSED-DDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 157 P~LyLYSk~-D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
..|+|-|.. |++-+++...+++..++. ..|+|.. |-=++-++|.++|..|..
T Consensus 135 ~~~~lL~qtgDEvLDyr~a~a~y~~~~~-------~V~dgg~---H~F~~f~~~l~~i~aF~g 187 (191)
T COG3150 135 RCLVLLSQTGDEVLDYRQAVAYYHPCYE-------IVWDGGD---HKFKGFSRHLQRIKAFKG 187 (191)
T ss_pred cEEEeecccccHHHHHHHHHHHhhhhhh-------eeecCCC---ccccchHHhHHHHHHHhc
Confidence 456688887 999999999988877763 4567744 455677889999998875
No 158
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.36 E-value=49 Score=33.02 Aligned_cols=49 Identities=20% Similarity=0.280 Sum_probs=34.1
Q ss_pred ccCccEEEec----------cc-C--Cccch----H--HHHHHHHHHHHHhcCCCCCEEEEEeccCHH
Q 017976 4 FSGFDYCNIC----------RF-F--PEKAE----S--LALDVLKELVEELKFGPCPVVFASFSGGPK 52 (363)
Q Consensus 4 ~~Gfdvl~v~----------~f-~--p~k~~----~--~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~ 52 (363)
..||=|+++. .+ | |+... . ....++..|+.+....+.+|++-|.||||.
T Consensus 89 ~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~ 156 (312)
T COG3509 89 REGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGR 156 (312)
T ss_pred ccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHH
Confidence 3588888883 12 4 55211 1 345566677777777888999999999996
No 159
>PF09497 Med12: Transcription mediator complex subunit Med12; InterPro: IPR019035 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med12 is a component of the evolutionarily conserved Mediator complex []. The Med12 subunit may specifically regulate transcription of targets of the Wnt signaling pathway and SHH signaling pathway. Med12 is a negative regulator of the Gli3-dependent sonic hedgehog signaling pathway via its interaction with Gli3 within the Mediator. A complex is formed between Med12, Med13, CDK8 and CycC which is responsible for suppression of transcription []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=34.92 E-value=13 Score=28.53 Aligned_cols=20 Identities=25% Similarity=0.311 Sum_probs=18.3
Q ss_pred CcccchhhhhhcccccCCCc
Q 017976 309 NTHGVLGQILFDVCVPKNVE 328 (363)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~ 328 (363)
=|||.=|+.|||.|.-+||.
T Consensus 36 iPhg~k~~~ll~~l~~~~VP 55 (64)
T PF09497_consen 36 IPHGIKKEELLEQLCEYNVP 55 (64)
T ss_pred CCCcccHHHHHHHHHHcCCC
Confidence 38999999999999999986
No 160
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=34.21 E-value=79 Score=27.52 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=15.1
Q ss_pred CCCCEE--EEEeccCHHHHHHH
Q 017976 38 GPCPVV--FASFSGGPKACMYK 57 (363)
Q Consensus 38 ~~~~Il--~H~FSnGG~~~l~~ 57 (363)
.+.|++ |||+|..|..+...
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~ 71 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSR 71 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHH
Confidence 455766 99999999965544
No 161
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=33.62 E-value=95 Score=31.53 Aligned_cols=58 Identities=26% Similarity=0.222 Sum_probs=33.9
Q ss_pred HHHHHHHh-cCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcch
Q 017976 28 LKELVEEL-KFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 28 L~~L~~~~-~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
|+.++++. +...++|+|.++||||-...+- ++... .+. -....|+++|.=++|-....
T Consensus 106 lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f-l~~~~--------~~~--W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 106 LKQLIEEAYKKNGKKVVLIAHSMGGLVARYF-LQWMP--------QEE--WKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCchHHHHH-HHhcc--------chh--hHHhhhhEEEEeCCCCCCCh
Confidence 44555433 3347799999999999743322 22211 110 12234899999888865544
No 162
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=32.76 E-value=66 Score=33.53 Aligned_cols=45 Identities=16% Similarity=-0.010 Sum_probs=26.5
Q ss_pred CCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcch
Q 017976 39 PCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 39 ~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
..+++|.|.||||....+-+ +. ..+.. ...|+.+|.=++|-....
T Consensus 161 ~~kV~LVGHSMGGlva~~fl-~~---------~p~~~---~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 161 GKKVNIISHSMGGLLVKCFM-SL---------HSDVF---EKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCCEEEEEECHhHHHHHHHH-HH---------CCHhH---HhHhccEEEECCCCCCCc
Confidence 56999999999997444322 11 11112 223777776677755443
No 163
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=32.09 E-value=2.9e+02 Score=29.52 Aligned_cols=140 Identities=17% Similarity=0.241 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcchhhhhhh
Q 017976 23 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARF 102 (363)
Q Consensus 23 ~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~~~g~~~ 102 (363)
-..++|.+-++.+....+.+++-|.|||-.-++|.-+++ + -+++|+== |.....+.+.+.
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l---------~----------P~AIiVgK-PL~NLGtiA~n~ 399 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL---------S----------PHAIIVGK-PLVNLGTIASRM 399 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC---------C----------CceEEEcC-cccchhhhhccc
Confidence 455677777778888899999999999986555443332 2 25666543 433333333322
Q ss_pred hccccccccCCChhHHHH--HHHHHHhhhchhhhccccchhHHHHHHhhcCCCCCCcEEEEEeCCCCccChHHHHHHHHH
Q 017976 103 AVHPSVLNMSHPPRLVSR--IANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQR 180 (363)
Q Consensus 103 a~~p~~~k~~~pp~l~~~--v~~~i~s~L~~l~~~~f~~~~~~y~~~L~~~~~~~~P~LyLYSk~D~lVP~~~Ve~~a~~ 180 (363)
+..+|..+..- +....... +-....+.....+|..+...+-..+..-+-|=++|+.=+ ...+++.+.
T Consensus 400 -------rL~RP~~F~TslDvl~~~~g~---~s~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDYD~-~A~~~L~~~ 468 (511)
T TIGR03712 400 -------RLDRPDEFGTALDILLLNTGG---TSSEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDYDP-TAFQDLLPY 468 (511)
T ss_pred -------cccCCCCCchHHHhHHhhcCC---CCHHHHHHHHHHHHHHHhhcCcccceEEEEeeccccCCH-HHHHHHHHH
Confidence 22333222111 11111111 111112222345888887776667788888889998865 467889988
Q ss_pred HHhCCCceEEEEc
Q 017976 181 LCDLGADVKLVKW 193 (363)
Q Consensus 181 ~r~~G~~V~~~~F 193 (363)
+.+.|..|-.+-+
T Consensus 469 l~~~~~~v~~kG~ 481 (511)
T TIGR03712 469 LSKQGAQVMSKGI 481 (511)
T ss_pred HHhcCCEEEecCC
Confidence 8888877666554
No 164
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=31.28 E-value=64 Score=34.64 Aligned_cols=51 Identities=20% Similarity=0.410 Sum_probs=34.7
Q ss_pred CCCCcEEEEEeCCCCccChHHHHHH-------HHHHHhCCCceEEEEcCCCCcccccc
Q 017976 153 RFGAPYLILCSEDDDLAPYQVIYNF-------AQRLCDLGADVKLVKWNSSPHVGHYR 203 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lVP~~~Ve~~-------a~~~r~~G~~V~~~~Fe~S~HV~H~r 203 (363)
..++|..+++|..|.+.|++.+-.. .++.+..|-.+-...=+..+|-|.+-
T Consensus 295 ~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFV 352 (581)
T PF11339_consen 295 NIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFV 352 (581)
T ss_pred hCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEe
Confidence 4679999999999999999987333 34445556544444445566666663
No 165
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=30.27 E-value=2.1e+02 Score=24.34 Aligned_cols=52 Identities=12% Similarity=0.028 Sum_probs=29.6
Q ss_pred CCCCcEEEEEeCCCCcc-ChHHHHHHHHHHHhC-CCceEEEEcCCCCcccccccChHhH
Q 017976 153 RFGAPYLILCSEDDDLA-PYQVIYNFAQRLCDL-GADVKLVKWNSSPHVGHYRHYPIDY 209 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lV-P~~~Ve~~a~~~r~~-G~~V~~~~Fe~S~HV~H~r~hPeeY 209 (363)
....|.++++++.|... +.... +.|++. ...++...++ +.|...+..++..-
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~----~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~ 204 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDP----DGWRAHWPLPHTVVDVP-GDHFTMMEEHAAAT 204 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCc----ccccCCCCCCceeEEcc-CchHHHHHHhHHHH
Confidence 45679999999988764 22221 233332 2345666664 55777665555333
No 166
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=29.90 E-value=54 Score=28.03 Aligned_cols=53 Identities=23% Similarity=0.278 Sum_probs=38.6
Q ss_pred cEEEEEeCCCCccChHHHHHHHHHHHhC-CCceEEEEcCCCCcccccccChHhHHHHH
Q 017976 157 PYLILCSEDDDLAPYQVIYNFAQRLCDL-GADVKLVKWNSSPHVGHYRHYPIDYKAAV 213 (363)
Q Consensus 157 P~LyLYSk~D~lVP~~~Ve~~a~~~r~~-G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV 213 (363)
+.+++||. |.--.-+-|.++++.+++. |.+|..=.|+... + -+..+.++...-
T Consensus 2 kVfI~Ys~-d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~~~-i--~~~g~~~W~~~~ 55 (150)
T PF08357_consen 2 KVFISYSH-DSEEHKEWVLALAEFLRQNCGIDVILDQWELNE-I--ARQGPPRWMERQ 55 (150)
T ss_pred eEEEEeCC-CCHHHHHHHHHHHHHHHhccCCceeecHHhhcc-c--ccCCHHHHHHHH
Confidence 57889999 6666778999999999999 9999887775422 1 134565565443
No 167
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=29.19 E-value=1e+02 Score=32.06 Aligned_cols=44 Identities=18% Similarity=0.178 Sum_probs=39.2
Q ss_pred ChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHH
Q 017976 170 PYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 217 (363)
Q Consensus 170 P~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL 217 (363)
..++++.+.+.+++.|.+|.-+.| |||.-..+++-|.+|+.+.-
T Consensus 191 ~~~~~~~lLd~ak~l~lnvvGvsf----HvGSgc~d~~~y~~Ai~dAr 234 (448)
T KOG0622|consen 191 SLDNCRHLLDMAKELELNVVGVSF----HVGSGCTDLQAYRDAISDAR 234 (448)
T ss_pred CHHHHHHHHHHHHHcCceEEEEEE----EecCCCCCHHHHHHHHHHHH
Confidence 467899999999999999998877 99999999999999987653
No 168
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=28.96 E-value=1.4e+02 Score=29.57 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=40.6
Q ss_pred CccchHHHHHHHHHHHHH---hcCCCC-CEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCC
Q 017976 17 PEKAESLALDVLKELVEE---LKFGPC-PVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 92 (363)
Q Consensus 17 p~k~~~~A~~vL~~L~~~---~~~~~~-~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~ 92 (363)
++.+.+-|..+++.+... ++...+ ++++||-|.|+...- .. ......+.+++.|.++=-+|.
T Consensus 82 r~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~----~a----------f~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 82 RDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGE----AA----------FDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchh----hh----------hccHHHhhhhcceEEEeCCCC
Confidence 344555667777776543 332333 799999999985211 11 123345566799999988776
Q ss_pred Ccch
Q 017976 93 DFTS 96 (363)
Q Consensus 93 ~~~~ 96 (363)
....
T Consensus 148 ~s~~ 151 (289)
T PF10081_consen 148 FSPL 151 (289)
T ss_pred CChh
Confidence 5544
No 169
>PLN02454 triacylglycerol lipase
Probab=28.49 E-value=93 Score=32.33 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=20.1
Q ss_pred HHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHH
Q 017976 29 KELVEELKFGPCPVVFASFSGGPKACMYKVLQI 61 (363)
Q Consensus 29 ~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~ql 61 (363)
+++++..+..+..|++-|.|+||++.......+
T Consensus 217 ~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 217 KELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 334444432333699999999998655444333
No 170
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=27.65 E-value=1.5e+02 Score=30.72 Aligned_cols=64 Identities=16% Similarity=0.062 Sum_probs=39.9
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccC--hHhHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY--PIDYKAAVTELLG 218 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~h--PeeY~~aV~~FL~ 218 (363)
..+|..+.||++|-++..+||+.+.....+... ...+.+++=.|..-.=.+ +++=.+.|-+.++
T Consensus 331 i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~ 396 (403)
T KOG2624|consen 331 IKVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLR 396 (403)
T ss_pred cccCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHH
Confidence 368999999999999999999999988765433 222324444444333222 4433344444444
No 171
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=27.57 E-value=1.2e+02 Score=28.61 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=26.2
Q ss_pred CCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccc-cceEEEcC
Q 017976 37 FGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDC-FSGQIYDS 89 (363)
Q Consensus 37 ~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~-IkG~IlDS 89 (363)
+..+|++|.|+|-|+. .+.++|.+.-.++ + ++++ |.+.++..
T Consensus 92 n~GRPfILaGHSQGs~----~l~~LL~e~~~~~---p----l~~rLVAAYliG~ 134 (207)
T PF11288_consen 92 NNGRPFILAGHSQGSM----HLLRLLKEEIAGD---P----LRKRLVAAYLIGY 134 (207)
T ss_pred CCCCCEEEEEeChHHH----HHHHHHHHHhcCc---h----HHhhhheeeecCc
Confidence 3578999999999996 4556665432221 1 2223 56667666
No 172
>PLN02408 phospholipase A1
Probab=26.27 E-value=99 Score=31.59 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=19.8
Q ss_pred HHHHHhcCCCCCEEEEEeccCHHHHHHHHHH
Q 017976 30 ELVEELKFGPCPVVFASFSGGPKACMYKVLQ 60 (363)
Q Consensus 30 ~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~q 60 (363)
.+++..+..+..|++-|.|.||+........
T Consensus 190 ~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 190 RLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3444444344579999999999854443333
No 173
>KOG0416 consensus Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=25.79 E-value=57 Score=29.94 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=18.0
Q ss_pred cccccChHhHHHHHHHHHHHHh
Q 017976 200 GHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 200 ~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
+.|.++|++|.+.|.+++++..
T Consensus 126 al~l~~~~~Y~~~v~eY~~kYA 147 (189)
T KOG0416|consen 126 ALYLRDPEEYEEKVKEYIKKYA 147 (189)
T ss_pred HHHhcCHHHHHHHHHHHHHHhc
Confidence 4567889999999999888743
No 174
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=25.58 E-value=1.5e+02 Score=26.70 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=24.2
Q ss_pred CCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCC
Q 017976 39 PCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSP 91 (363)
Q Consensus 39 ~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P 91 (363)
..+|++.|+|.|+.... .++.. . .++ ....++|.++|+=.-|
T Consensus 80 ~~kivl~GYSQGA~V~~----~~~~~---~--~l~--~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVG----DALSG---D--GLP--PDVADRIAAVVLFGDP 121 (179)
T ss_dssp TSEEEEEEETHHHHHHH----HHHHH---T--TSS--HHHHHHEEEEEEES-T
T ss_pred CCCEEEEecccccHHHH----HHHHh---c--cCC--hhhhhhEEEEEEecCC
Confidence 44899999999997433 33321 0 011 2334568887774434
No 175
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=25.49 E-value=2.3e+02 Score=28.73 Aligned_cols=48 Identities=15% Similarity=0.147 Sum_probs=29.3
Q ss_pred cccCccEEEeccc---CCc----------cchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHH
Q 017976 3 LFSGFDYCNICRF---FPE----------KAESLALDVLKELVEELKFGPCPVVFASFSGGPKA 53 (363)
Q Consensus 3 ~~~Gfdvl~v~~f---~p~----------k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~ 53 (363)
|.++|+|+++.+- ..+ ....++..+. .+.+.+. ..++.+.|+|+||..
T Consensus 150 L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~-~~i~~l~--~~~~~LvG~s~GG~i 210 (383)
T PLN03084 150 LSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLE-SLIDELK--SDKVSLVVQGYFSPP 210 (383)
T ss_pred HhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHH-HHHHHhC--CCCceEEEECHHHHH
Confidence 5678999999832 111 1123555444 5555554 346888899999864
No 176
>PLN02571 triacylglycerol lipase
Probab=25.17 E-value=1.1e+02 Score=31.74 Aligned_cols=36 Identities=25% Similarity=0.271 Sum_probs=21.7
Q ss_pred HHHHHH---HHHHhcCCCCCEEEEEeccCHHHHHHHHHH
Q 017976 25 LDVLKE---LVEELKFGPCPVVFASFSGGPKACMYKVLQ 60 (363)
Q Consensus 25 ~~vL~~---L~~~~~~~~~~Il~H~FSnGG~~~l~~l~q 60 (363)
..|+++ |++..+....+|++-|.|+||++.......
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 344444 344444334489999999999854433333
No 177
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=24.50 E-value=1.5e+02 Score=31.07 Aligned_cols=67 Identities=19% Similarity=0.227 Sum_probs=53.2
Q ss_pred CCCcEEEEEeCCCCccChHHHHHHHHHHHhC-CC-------ceEEEEcCCCCcccccc-cChHhHHHHHHHHHHHH
Q 017976 154 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDL-GA-------DVKLVKWNSSPHVGHYR-HYPIDYKAAVTELLGKA 220 (363)
Q Consensus 154 ~~~P~LyLYSk~D~lVP~~~Ve~~a~~~r~~-G~-------~V~~~~Fe~S~HV~H~r-~hPeeY~~aV~~FL~ka 220 (363)
.+-..|..|+-+|.+||+....+.+++..+. |. -+++...++-.||+--- ..+-.=..++.+++++-
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 3457888999999999999999999987654 43 25778889999999876 45666778888888763
No 178
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=24.47 E-value=4.3e+02 Score=26.33 Aligned_cols=46 Identities=15% Similarity=-0.009 Sum_probs=32.8
Q ss_pred cChHHHHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHHHHh
Q 017976 169 APYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 169 VP~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
.-...+.++++.++++|.+....-|+| .|-.- -...++.++|...+
T Consensus 251 ~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~------~Wr~~l~~~L~~l~ 296 (299)
T COG2382 251 DFLRPNRALAAQLEKKGIPYYYREYPG-GHDWA------WWRPALAEGLQLLL 296 (299)
T ss_pred cccchhHHHHHHHHhcCCcceeeecCC-CCchh------HhHHHHHHHHHHhh
Confidence 334478899999999999999999988 66432 23345666666554
No 179
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=24.09 E-value=94 Score=27.99 Aligned_cols=46 Identities=26% Similarity=0.144 Sum_probs=30.5
Q ss_pred ccccCccEEEecccCCccchHHHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHH
Q 017976 2 ILFSGFDYCNICRFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYK 57 (363)
Q Consensus 2 ~~~~Gfdvl~v~~f~p~k~~~~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~ 57 (363)
|-.-||+|+.++.--.+ -+++|.+..+ +..++|.|-|.=|...+-.
T Consensus 8 y~~~gy~v~~~S~~~~~--------g~~~l~~~l~--~k~~vl~G~SGvGKSSLiN 53 (161)
T PF03193_consen 8 YEKLGYPVFFISAKTGE--------GIEELKELLK--GKTSVLLGQSGVGKSSLIN 53 (161)
T ss_dssp HHHTTSEEEE-BTTTTT--------THHHHHHHHT--TSEEEEECSTTSSHHHHHH
T ss_pred HHHcCCcEEEEeCCCCc--------CHHHHHHHhc--CCEEEEECCCCCCHHHHHH
Confidence 56779999998866333 2334444443 4799999999999965533
No 180
>PLN02324 triacylglycerol lipase
Probab=23.85 E-value=1.2e+02 Score=31.51 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=20.8
Q ss_pred HHHHHhcCCCCCEEEEEeccCHHHHHHHHHHH
Q 017976 30 ELVEELKFGPCPVVFASFSGGPKACMYKVLQI 61 (363)
Q Consensus 30 ~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~ql 61 (363)
.|++..+.....|++-|.|.||++.+-....+
T Consensus 205 ~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 205 RLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 44544443445899999999998555444343
No 181
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=23.47 E-value=2.6e+02 Score=28.36 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=21.7
Q ss_pred HHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHH
Q 017976 28 LKELVEELKFGPCPVVFASFSGGPKACMYKVLQI 61 (363)
Q Consensus 28 L~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~ql 61 (363)
|.+.+.+.....+||-+.|||+|+-.-++.+.++
T Consensus 208 LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L 241 (345)
T PF05277_consen 208 LADALLSRNQGERPVTLVGHSLGARVIYYCLLEL 241 (345)
T ss_pred HHHHHHHhcCCCCceEEEeecccHHHHHHHHHHH
Confidence 3333333334677999999999997544444444
No 182
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=22.42 E-value=1e+02 Score=30.52 Aligned_cols=49 Identities=22% Similarity=0.367 Sum_probs=40.0
Q ss_pred CCCCcEEEEEeCCCCcc--------ChHHHHHHHHHHHhCCCceEEEEcCCCCcccc
Q 017976 153 RFGAPYLILCSEDDDLA--------PYQVIYNFAQRLCDLGADVKLVKWNSSPHVGH 201 (363)
Q Consensus 153 ~~~~P~LyLYSk~D~lV--------P~~~Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H 201 (363)
..+.|+.+..=-+|+|| +-+.|.+...++++.|.-+-+|-..++.||.|
T Consensus 118 ~~~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~ 174 (297)
T PF05152_consen 118 VWEPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRH 174 (297)
T ss_pred cCCCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHH
Confidence 34568888888788877 55778888888999999899999888888876
No 183
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=21.07 E-value=1.8e+02 Score=29.31 Aligned_cols=52 Identities=17% Similarity=0.153 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcch
Q 017976 23 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 23 ~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
-+.+++..+.+.. ...+|.+-|.|.||+ ++.++..+.+ +-.+-|.| ||+...
T Consensus 261 a~ldI~~~v~~~Y--pda~iwlTGHSLGGa-----~AsLlG~~fg--------------lP~VaFes-PGd~~a 312 (425)
T KOG4540|consen 261 AALDILGAVRRIY--PDARIWLTGHSLGGA-----IASLLGIRFG--------------LPVVAFES-PGDAYA 312 (425)
T ss_pred HHHHHHHHHHHhC--CCceEEEeccccchH-----HHHHhccccC--------------CceEEecC-chhhhh
Confidence 4555665555554 366999999999996 3344432211 34566777 887655
No 184
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=21.07 E-value=1.8e+02 Score=29.31 Aligned_cols=52 Identities=17% Similarity=0.153 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeccCHHHHHHHHHHHHHhhhhhccCccchhhhccccceEEEcCCCCCcch
Q 017976 23 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTS 96 (363)
Q Consensus 23 ~A~~vL~~L~~~~~~~~~~Il~H~FSnGG~~~l~~l~qll~~~~~~~~~~~~~~~l~~~IkG~IlDS~P~~~~~ 96 (363)
-+.+++..+.+.. ...+|.+-|.|.||+ ++.++..+.+ +-.+-|.| ||+...
T Consensus 261 a~ldI~~~v~~~Y--pda~iwlTGHSLGGa-----~AsLlG~~fg--------------lP~VaFes-PGd~~a 312 (425)
T COG5153 261 AALDILGAVRRIY--PDARIWLTGHSLGGA-----IASLLGIRFG--------------LPVVAFES-PGDAYA 312 (425)
T ss_pred HHHHHHHHHHHhC--CCceEEEeccccchH-----HHHHhccccC--------------CceEEecC-chhhhh
Confidence 4555665555554 366999999999996 3344432211 34566777 887655
No 185
>PRK10391 oriC-binding nucleoid-associated protein; Provisional
Probab=21.02 E-value=25 Score=27.51 Aligned_cols=14 Identities=57% Similarity=0.826 Sum_probs=7.4
Q ss_pred hhhhhhcc-cccCCC
Q 017976 314 LGQILFDV-CVPKNV 327 (363)
Q Consensus 314 ~~~~~~~~-~~~~~~ 327 (363)
.|--|||+ ||||.|
T Consensus 52 ~~~kLyD~gkVP~sV 66 (71)
T PRK10391 52 SGGRLFDLGQVPKSV 66 (71)
T ss_pred hCccccccccCCHHH
Confidence 34445663 666654
No 186
>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases. This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....
Probab=20.94 E-value=88 Score=29.69 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=35.5
Q ss_pred HHHHHHHHHhCCCceEEEEcCCCCcccccccChHhHHHHHHHHHH
Q 017976 174 IYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 218 (363)
Q Consensus 174 Ve~~a~~~r~~G~~V~~~~Fe~S~HV~H~r~hPeeY~~aV~~FL~ 218 (363)
+++.++.+++...+.-.+.+.+...++|- .++++|.++|..+=+
T Consensus 129 ~~~~~~~l~~~~~~~v~~~~~~~D~~GH~-~~~~~~~~~ie~~D~ 172 (252)
T PF01676_consen 129 AEAAIEALKKDKYDFVFVHVKGTDEAGHR-GDPEAYIEAIERIDR 172 (252)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEHHHHHHTT-T-HHHHHHHHHHHHH
T ss_pred HHHHHHhhhcccCCeEEEeecCcchhhcc-CCHHHHHHHHHHHHH
Confidence 67888888777888888888899999995 588999998877655
No 187
>PF15585 Imm46: Immunity protein 46
Probab=20.48 E-value=2.1e+02 Score=25.04 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=43.6
Q ss_pred EEeCCCC-ccChHHHHHHHHHHHhCCCc--eEEEEcCC--CCcccccccChHhHHHHHHHHHHHHh
Q 017976 161 LCSEDDD-LAPYQVIYNFAQRLCDLGAD--VKLVKWNS--SPHVGHYRHYPIDYKAAVTELLGKAG 221 (363)
Q Consensus 161 LYSk~D~-lVP~~~Ve~~a~~~r~~G~~--V~~~~Fe~--S~HV~H~r~hPeeY~~aV~~FL~ka~ 221 (363)
=|+++|. .-.-+.++++.+...+.++. +.+....+ .-|++.+-.|+-+++..|.+.++++.
T Consensus 13 s~~~~D~~~~~~~~~~~i~~~i~~~~~~~~~~L~~~NG~~~l~~~g~~NHr~~~~~eii~lf~~i~ 78 (129)
T PF15585_consen 13 SYSDEDDEAKLEKIIQEIQERISELDWGGLVDLRAMNGSYFLHFGGLSNHRGQEAPEIIELFERIA 78 (129)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhcCCCCeEEEEecCCcEEEEEccccCCCccchHHHHHHHHHHH
Confidence 3556666 44555666666666776665 66666666 46899999999999999988887643
Done!